Psyllid ID: psy463

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790
Protein Sequence
MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA
Secondary Structure (PSIPRED)
cccccccccccEEEEcccccEEEEEEEccccccEEEEEEcccccccccccccEEEccccEEEEEEcccccEEEEEEEccccEEEEEEEEcccccEEEEEEEccccccccccccEEEcccccEEEEEEccccccccccccccccEEEEEccccccccccccccEEEEEEEEcccEEEEcccccccEEEEEEEccccccEEEEEcccccccccccccccccccccccccccccEEEEEEccccccccccEEEEEEEccccEEEEEEcccccEEEEEEEEcccccEEEEEEEEccccEEcccccEEEcccccEEEEEEccccccccccccccccEEEEEEcccccccccccEEccccccEEEEEEEEEEccccEEEEEEccccccEEEEEEEEcccccccccEEcccccccccccccEEEEEEcccccEEEEEEEcccccEEEEEEccccEEEEEEccHHHHHHHcccccccEEEEEEEcccccEEEEEEEccccccccccccccEEEEEccccccEEEcccccccHHHHHHccccEEEEEEcccccccccHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccEEEEcccHHHHHHHHHcccccccEEEEEEEccccccccccccccccccccccccccHHHHHHccHHHHHHccccccEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEcccccccccccHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHHHHHcccEEEEEcccccEEEEEEEccccccEEEEEcccccccccccccccccccccEEEEEEEccccEEEEEEEccccEEEEEEEEcccccEEEEEEEccccccEccccccEEcccccEEEEEEccccEEEEEcccccccEEEEEEcccccEEEcccccEEEEEEEEEEEEEEEEcccccEEEEEEEcccccccccEEEEccccccccccccccEEEEccccccccccEEEEEEEEcccccccEEEEEEEEccccEEEEEEEccccEEEEEEEEcccccEEEEEEccccccEEccccccEEcccccEEEEEEEccccccccEcccccEEEEEEEccccccccccEEEEEccccEEEEEEEEEcccccEEEEEEccccccccEEEEEEccccccccEEEEccHEEccccccccEEEEEcccccEEEEEcccccccEEEEEcccccEEEEEEccHHHHHHHHHccccccEEEEEEcccccEEEEEEEccccccccccccEEEEEEEccccccccccccccccHHHHHHHccccEEEEEcccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHcccEEEEEEEEEEEcHHHHHHHHHHHccccccccEEEEEcccccHHHcEHHHHHHHHccccccccHHHHHccccHHHHHHHHHcEEEEEEEcccccccHHHHHHHHHHHHHcccccEEEEEHccccccccHHHHHHcccHHHHHHHHHcEEEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mfteevlssssalwfspsgnnlayasfddnrtvimtipfygnpghpssqytqainlrepvlsrvNWANESVVAAWVNRVQNRARitrcsinegtcdvvfsrdldrgwfepfdhlrfssdGKKMLLILSHnqesdgstpvdswdhltfidlddqagikdkvpvpltrgrftvTEILAwderennpllilshnqesdgstpvdswdhltfidlddqagikdkvpvpltrgrftVTEILAWdekennvepvlsrVNWANESVVAAWVNRVQNRARitrcsinegtcdvvfsrdldrgwfepfdhlrfssdGKKMLLILSHnqesdgstpvdswdhltfidlddqagikdkvpvpltrgrftVTEILAwdekennvyflstqgspivqHMYRiniadptatpecitcdlltsanqkcsysgatfsTNVSYYVLScigpgipeimlfdktgqrllywdTNEDLRTALtnitlpsveymsvpiqpnmeaqvklflppgidtsghkkypllihvyggpssfqvteRFSVdwnlyladnKDIVVAYIDGrnsalkgntlkyagyrrlgtveiYDQINVTRYLqenlpyidktrtaiwgwsyggYATGLAlaldpsnvfkcgisvapvtdwiyydtiyserymglptfednlEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQsqrymglptfednLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHadimfqsqtypdeehgligvrphfYHTLERFLDSCFA
Flexible Loop (DISEMBL)
mfteevlssssalwfspsGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVnrvqnraritrcsinegtcdvVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFidlddqagikdkvpvpltrgrfTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFidlddqagikdkvpvpltrgrftvteilawdekennvePVLSRVNWANESVVAAWVNrvqnraritrcsinegtcdvVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFidlddqagikdkvpvpltrgrfTVTEilawdekennVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDgrnsalkgntlkyagyrrlGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA
Low Complexity Region (SEG)
MFTEEVLssssalwfspsGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA
Disordered region (IsUnstruct)
************LWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS**********VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILS**********VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS**********VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC**
Disordered Region (DISOPRED)
MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA
Disordered Region (DISEMBL)
***********ALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN********VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN********VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN********VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA
Disordered Region (DISPRO)
MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	790	2.2.26 [Sep-21-2011]
B2D0J4	775	Venom dipeptidyl peptidas	no	N/A	0.582	0.593	0.389	1e-92
B1A4F7	776	Venom dipeptidyl peptidas	N/A	N/A	0.551	0.561	0.392	7e-88
Q12884	760	Seprase OS=Homo sapiens G	yes	N/A	0.693	0.721	0.331	8e-78
P97321	761	Seprase OS=Mus musculus G	yes	N/A	0.535	0.555	0.379	2e-77
P22411	766	Dipeptidyl peptidase 4 OS	no	N/A	0.535	0.552	0.367	6e-73
Q9N2I7	765	Dipeptidyl peptidase 4 OS	N/A	N/A	0.535	0.552	0.365	4e-72
P81425	765	Dipeptidyl peptidase 4 OS	no	N/A	0.535	0.552	0.356	1e-71
P27487	766	Dipeptidyl peptidase 4 OS	no	N/A	0.534	0.550	0.357	3e-71
P14740	767	Dipeptidyl peptidase 4 OS	no	N/A	0.539	0.555	0.356	1e-70
P28843	760	Dipeptidyl peptidase 4 OS	no	N/A	0.535	0.556	0.358	9e-70

>sp|B2D0J4|VDPP4_APIME Venom dipeptidyl peptidase 4 OS=Apis mellifera PE=1 SV=1

 Score =  342 bits (876), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 194/498 (38%), Positives = 286/498 (57%), Gaps = 38/498 (7%)

Query: 206 LTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANES-VVAAWV 264
           L+ IDL D +     +P P+        +++  D        VL   NW  +  +VA W 
Sbjct: 281 LSVIDLHDPSSKLIDLPPPV--------DVVGADN-------VLYTANWRRDGEIVATWT 325

Query: 265 NRVQNRARITRCSINEGTCDVVFSRDLDRGWFE---PFDHLRFSSDGKKMLLILSHNQES 321
           NRVQN+A++      +G  + ++  +   GW     P  H R+        +I++  Q+S
Sbjct: 326 NRVQNKAQLVLYD-TKGNANNIYYEEETEGWLRIQPPLYHDRY--------VIVAKLQDS 376

Query: 322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ-GS 380
              T    + H T ++  + A + +     LT G   V  +L  D     +Y+L T+ G 
Sbjct: 377 --GTKAGRFLHATRLEYRNGALVDE---TDLTPGTCEVISLLLVDHARARLYYLGTELGK 431

Query: 381 PIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIM 440
           P  +++Y + ++     P C++CD+LT    +C+Y+ A FSTN S+Y L C GP    I 
Sbjct: 432 PSHKNLYSVQLSG-NEPPVCLSCDVLTPEGNRCTYAYAYFSTNGSHYALYCAGPDPVFIA 490

Query: 441 LFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKK 500
           + +   +++  W+ N  LR  L   T P V+  +V        +VKL+LPP  D +  KK
Sbjct: 491 IVNANHRQISIWEENRSLRRKLAARTQPIVKNFNVNAN-GYTNKVKLYLPPDFDET--KK 547

Query: 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG 560
           YPLLI VY GP++ ++TE  +  +  Y+  N+ ++   IDGR SA KG+ + +  YRRLG
Sbjct: 548 YPLLITVYAGPNTIRITEEATYGFESYIVTNRSVIYGRIDGRGSAYKGSKMLFEIYRRLG 607

Query: 561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT 620
           TVEI DQI +TR LQE   +ID  RT IWGWSYGG++  + LA D  +VFKCGISVAPVT
Sbjct: 608 TVEIEDQIIITRTLQEKYSWIDSNRTGIWGWSYGGFSAAMVLATDAESVFKCGISVAPVT 667

Query: 621 DWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSM 680
            WIYYD++Y+ER+MGLPT EDN  GY    ++ +V+ +R K+Y+L+HGT DDNVH+QQ+M
Sbjct: 668 SWIYYDSLYTERFMGLPTPEDNQSGYNDTDVSRRVEGMRGKKYMLIHGTADDNVHYQQTM 727

Query: 681 MLAKSLQHADIMFQSQRY 698
           ML K+L ++DIMFQ Q Y
Sbjct: 728 MLNKALVNSDIMFQQQTY 745

Venom dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. May process promelittin into its activ form and/or modulate the chemotactic activity of immune cells after the insect sting.
Apis mellifera (taxid: 7460)
EC: 3EC: .EC: 4EC: .EC: 1EC: 4EC: .EC: 5

>sp|B1A4F7|VDDP4_VESVU Venom dipeptidyl peptidase 4 OS=Vespula vulgaris PE=1 SV=1

 Score =  325 bits (834), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 178/453 (39%), Positives = 267/453 (58%), Gaps = 17/453 (3%)

Query: 248 VLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS 306
           +L  V W + + VV  W NRVQN+  I   ++       +   +  +GW +   HL F  
Sbjct: 307 LLYNVQWKDFDHVVVTWSNRVQNKTEIVWYNMYGEIVKTLHVVE-HKGWLD-IKHLFFY- 363

Query: 307 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWD 366
              K  + +   Q S   T    + H+T  D   +   +    + LT     V  I   D
Sbjct: 364 ---KGSVYIRKLQPS--GTKAGRFHHVTRYD---ETFKQSPTQMDLTPDAIEVQNICTID 415

Query: 367 EKENNVYFLSTQ-GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVS 425
           +    +Y+L++  G P  +++Y +  AD +  P CI+C++LT     C+Y+ A FS    
Sbjct: 416 QSNGRIYYLASGLGKPSQKNLYSVP-ADGSEKPTCISCNVLTPEGNVCTYADAIFSPLGQ 474

Query: 426 YYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQV 485
           YYVL C GP    + +F+   Q++  W+ N  LR  L    LP V+ + V      E++V
Sbjct: 475 YYVLVCHGPDPAFVSIFNNAHQKVYSWENNLSLRKKLAKRHLPLVKDLDVRAN-GYESKV 533

Query: 486 KLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSA 545
           +LFLP   D S  K YP+L++VY GP++ ++ +  S    +Y+  N+ ++ AYIDGR S+
Sbjct: 534 RLFLPHNFDES--KSYPMLVNVYAGPNTLKIIDAASYGHQVYMTTNRSVIYAYIDGRGSS 591

Query: 546 LKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD 605
            KG+ + ++ YR+LGTVE+ DQI VTR LQE  P+ID  RT +WGWSYGG++T + LA D
Sbjct: 592 NKGSKMLFSIYRKLGTVEVEDQITVTRQLQEMFPWIDSKRTGVWGWSYGGFSTAMILAKD 651

Query: 606 PSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLL 665
            S VFKCGI++APV+ WIYYD+IY+ER+MG PT EDNL GY    ++ +V+ IR K+++L
Sbjct: 652 TSFVFKCGIAIAPVSSWIYYDSIYTERFMGFPTPEDNLSGYNETDVSRRVEDIRGKKFML 711

Query: 666 VHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           +HG+ DDNVH+QQS+ LAK+L+ AD+MF+   Y
Sbjct: 712 IHGSGDDNVHYQQSLALAKALEKADVMFEQITY 744

Venom dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. May process venom proteins into their activ forms and/or modulate the chemotactic activity of immune cells after the insect sting.

Vespula vulgaris (taxid: 7454)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|Q12884|SEPR_HUMAN Seprase OS=Homo sapiens GN=FAP PE=1 SV=5

 Score =  292 bits (747), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 206/622 (33%), Positives = 316/622 (50%), Gaps = 74/622 (11%)

Query: 110 PFDHLRFSSDGKKMLLILSHN---QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR 166
           P  +L +S  G K+  +  +N   ++  G  P      +TF   +++  I + +P  +  
Sbjct: 149 PIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPF----QITFNGRENK--IFNGIPDWVYE 202

Query: 167 GRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT 226
                T+   W          L++ + +D   PV ++ +      D+Q      +P P  
Sbjct: 203 EEMLATKYALWWSPNGK---FLAYAEFNDTDIPVIAYSYYG----DEQYPRTINIPYPKA 255

Query: 227 RGRFTVTEILAWDE--------KENNVEPVL-------SRVNWA-NESVVAAWVNRVQNR 270
             +  V  I   D         +E  V  ++       S + W  +E V   W+ RVQN 
Sbjct: 256 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNV 315

Query: 271 ARITRCSINE--GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328
           + ++ C   E   T D   ++          +H+  S  G      +        STPV 
Sbjct: 316 SVLSICDFREDWQTWDCPKTQ----------EHIEESRTGWAGGFFV--------STPVF 357

Query: 329 SWDHLTFIDL-DDQAG------IKDKV--PVPLTRGRFTVTEILAWDEKENNVYFLSTQG 379
           S+D +++  +  D+ G      IKD V   + +T G++    I      ++++++ S + 
Sbjct: 358 SYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIF--RVTQDSLFYSSNEF 415

Query: 380 S--PIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIP 437
              P  +++YRI+I     + +C+TC L     ++C Y  A+FS    YY L C GPGIP
Sbjct: 416 EEYPGRRNIYRISIGSYPPSKKCVTCHL---RKERCQYYTASFSDYAKYYALVCYGPGIP 472

Query: 438 EIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTS 496
              L D +T Q +   + N++L  AL NI LP  E   + +   +    K+ LPP  D S
Sbjct: 473 ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVD-EITLWYKMILPPQFDRS 531

Query: 497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGY 556
             KKYPLLI VYGGP S  V   F+V+W  YLA  + +V+A +DGR +A +G+ L YA Y
Sbjct: 532 --KKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVY 589

Query: 557 RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISV 616
           R+LG  E+ DQI   R   E + +ID+ R AIWGWSYGGY + LALA   + +FKCGI+V
Sbjct: 590 RKLGVYEVEDQITAVRKFIE-MGFIDEKRIAIWGWSYGGYVSSLALA-SGTGLFKCGIAV 647

Query: 617 APVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHF 676
           APV+ W YY ++Y+ER+MGLPT +DNLE YK + +  + +  R+  YLL+HGT DDNVHF
Sbjct: 648 APVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHF 707

Query: 677 QQSMMLAKSLQHADIMFQSQRY 698
           Q S  +AK+L +A + FQ+  Y
Sbjct: 708 QNSAQIAKALVNAQVDFQAMWY 729

In association with DPP4 is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May have a role in tissue remodeling during development and wound healing, and may contribute to invasiveness in malignant cancers.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|P97321|SEPR_MOUSE Seprase OS=Mus musculus GN=Fap PE=2 SV=1

 Score =  291 bits (744), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 176/464 (37%), Positives = 255/464 (54%), Gaps = 41/464 (8%)

Query: 249 LSRVNW-ANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR------GWFEPF-- 299
            S + W ++E V   W+ RVQN + ++ C   E        ++ +       GW   F  
Sbjct: 293 FSWLTWVSSERVCLQWLKRVQNVSVLSICDFREDWHAWECPKNQEHVEESRTGWAGGFFV 352

Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV--PVPLTRGRF 357
               FS D      I S           D + H+ +I        KD V   + +T G++
Sbjct: 353 STPAFSQDATSYYKIFSDK---------DGYKHIHYI--------KDTVENAIQITSGKW 395

Query: 358 TVTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSY 415
               I      ++++++ S +  G P  +++YRI+I +   + +C+TC L     ++C Y
Sbjct: 396 EAIYIF--RVTQDSLFYSSNEFEGYPGRRNIYRISIGNSPPSKKCVTCHL---RKERCQY 450

Query: 416 SGATFSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
             A+FS    YY L C GPG+P   L D +T Q +   + N++L  +L NI LP VE   
Sbjct: 451 YTASFSYKAKYYALVCYGPGLPISTLHDGRTDQEIQVLEENKELENSLRNIQLPKVEIKK 510

Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
           +     +    K+ LPP  D S  KKYPLLI VYGGP S  V   F+V+W  YLA  + I
Sbjct: 511 LK-DGGLTFWYKMILPPQFDRS--KKYPLLIQVYGGPCSQSVKSVFAVNWITYLASKEGI 567

Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           V+A +DGR +A +G+   +A YR+LG  E+ DQ+   R   E + +ID+ R AIWGWSYG
Sbjct: 568 VIALVDGRGTAFQGDKFLHAVYRKLGVYEVEDQLTAVRKFIE-MGFIDEERIAIWGWSYG 626

Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY + LALA   + +FKCGI+VAPV+ W YY +IYSER+MGLPT +DNLE YK + +  +
Sbjct: 627 GYVSSLALA-SGTGLFKCGIAVAPVSSWEYYASIYSERFMGLPTKDDNLEHYKNSTVMAR 685

Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  R+  YLL+HGT DDNVHFQ S  +AK+L +A + FQ+  Y
Sbjct: 686 AEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 729

In association with DPP4 is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM (By similarity). May have a role in tissue remodeling during development and wound healing, and contribute to invasiveness in malignant cancers.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|P22411|DPP4_PIG Dipeptidyl peptidase 4 OS=Sus scrofa GN=DPP4 PE=1 SV=3

 Score =  276 bits (705), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 170/463 (36%), Positives = 248/463 (53%), Gaps = 40/463 (8%)

Query: 249 LSRVNWANESVVA-AWVNRVQNRARITRCSINEGTCDVVFSRDLDR------GW---FEP 298
           L  V W  E  ++  W+ R QN + I  C  +E T   + S           GW   F P
Sbjct: 300 LCGVTWVTEERISLQWIRRAQNYSIIDICDYDESTGRWISSVARQHIEISTTGWVGRFRP 359

Query: 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT 358
            +   F+SDG     I+S+ +          + H+     D            +T+G + 
Sbjct: 360 AEP-HFTSDGNSFYKIISNEE---------GYKHICHFQTDKSNC------TFITKGAWE 403

Query: 359 VTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYS 416
           V  I A     + +Y++S +  G P  +++YRI + D T    C++C+L     ++C Y 
Sbjct: 404 VIGIEAL--TSDYLYYISNEHKGMPGGRNLYRIQLNDYTKV-TCLSCEL---NPERCQYY 457

Query: 417 GATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR-LLYWDTNEDLRTALTNITLPSVEYMSV 475
            A+FS    YY L C GPG+P   L   +  + L   + N  L   L ++ +PS +   +
Sbjct: 458 SASFSNKAKYYQLRCFGPGLPLYTLHSSSSDKELRVLEDNSALDKMLQDVQMPSKKLDVI 517

Query: 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV 535
            +    +   ++ LPP  D S  KKYPLLI VY GP S +V   F + W  YLA  ++I+
Sbjct: 518 NLH-GTKFWYQMILPPHFDKS--KKYPLLIEVYAGPCSQKVDTVFRLSWATYLASTENII 574

Query: 536 VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595
           VA  DGR S  +G+ + +A  RRLGT E+ DQI  TR   + + ++D  R AIWGWSYGG
Sbjct: 575 VASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEATRQFSK-MGFVDDKRIAIWGWSYGG 633

Query: 596 YATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV 655
           Y T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++ 
Sbjct: 634 YVTSMVLGAG-SGVFKCGIAVAPVSKWEYYDSVYTERYMGLPTPEDNLDYYRNSTVMSRA 692

Query: 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           +  +  +YLL+HGT DDNVHFQQS  L+K+L  A + FQ+  Y
Sbjct: 693 ENFKQVEYLLIHGTADDNVHFQQSAQLSKALVDAGVDFQTMWY 735

Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones (By similarity). Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.

Sus scrofa (taxid: 9823)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|Q9N2I7|DPP4_FELCA Dipeptidyl peptidase 4 OS=Felis catus GN=DPP4 PE=2 SV=1

 Score =  273 bits (698), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 169/463 (36%), Positives = 251/463 (54%), Gaps = 40/463 (8%)

Query: 249 LSRVNWANESVVA-AWVNRVQNRARITRCSINEGTCDVVFSRDLDR------GW---FEP 298
           L  V WANE  ++  W+ R+QN + +     N  T   + S   +       GW   F P
Sbjct: 299 LCDVTWANEERISLQWLRRIQNYSVMDIRDYNNSTGKWISSAAQEHIEMSTTGWVGRFRP 358

Query: 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT 358
            +   F+SDG+    I+S+          D + H+    +D       K    +T+G + 
Sbjct: 359 AEP-HFTSDGRNFYKIISNE---------DGYKHICRFQIDK------KDCTFITKGAWE 402

Query: 359 VTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYS 416
           V  I A     + +Y++S +  G P  +++Y+I + D T    C++C+L     ++C Y 
Sbjct: 403 VIGIEAL--TTDYLYYISNEYKGMPGGRNLYKIQLNDYTKVA-CLSCEL---KPERCQYY 456

Query: 417 GATFSTNVSYYVLSCIGPGIPEIMLFDKTG-QRLLYWDTNEDLRTALTNITLPSVEYMSV 475
             +FS    YY L C GPG+P   L   +  + L   + N  L   L  + +PS + +  
Sbjct: 457 SVSFSKEAKYYQLRCSGPGLPLYTLHRSSNDEELRVLEDNSALDKMLQEVQMPSKK-LDF 515

Query: 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV 535
            I    +   ++ LPP  DTS  KKYPLLI VY GP S +    F ++W  YLA  ++I+
Sbjct: 516 IILNETKFWYQMILPPHFDTS--KKYPLLIDVYAGPCSQKADAIFRLNWATYLASTENII 573

Query: 536 VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595
           VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYGG
Sbjct: 574 VASFDGRGSGYQGDKIMHAVNRRLGTFEVEDQIEAARQFSK-MGFVDDKRIAIWGWSYGG 632

Query: 596 YATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV 655
           Y T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT +DNL+ YK + + ++ 
Sbjct: 633 YVTSMVLGAG-SGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPQDNLDYYKNSTVMSRA 691

Query: 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           +  +  +YLL+HGT DDNVHFQQS  ++K+L  A + FQ+  Y
Sbjct: 692 ENFKQVEYLLIHGTADDNVHFQQSAQISKALVDAGVDFQAMWY 734

Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones. Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the. penultimate residue is proline.

Felis catus (taxid: 9685)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|P81425|DPP4_BOVIN Dipeptidyl peptidase 4 OS=Bos taurus GN=DPP4 PE=1 SV=3

 Score =  271 bits (694), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/463 (35%), Positives = 248/463 (53%), Gaps = 40/463 (8%)

Query: 249 LSRVNWANESVVA-AWVNRVQNRARITRCSINEGTCDVVFSRDLDR------GW---FEP 298
           L  V W  E  ++  W+ R+QN + +  C  +  T   + S           GW   F P
Sbjct: 299 LCDVTWVTEERISLQWLRRIQNYSIMDICDYDRSTGRWISSVGRQHIEISTTGWVGRFRP 358

Query: 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT 358
            +   F+SDG     I+S+ +          + H+     D +          +T+G + 
Sbjct: 359 AEP-HFTSDGNSFYKIISNEE---------GYKHICHFQTDKRNC------TFITKGAWE 402

Query: 359 VTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYS 416
           V  I A     + +Y++S +  G P  +++Y+I + D T    C++C+L      +C Y 
Sbjct: 403 VIGIEAL--TSDYLYYISNEYKGMPGARNLYKIQLNDYTKVT-CLSCEL---NPDRCQYY 456

Query: 417 GATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR-LLYWDTNEDLRTALTNITLPSVEYMSV 475
             +FS    YY L C GPG+P   L +    + L   + N DL   L ++ +PS +   +
Sbjct: 457 SVSFSQEAKYYQLRCSGPGLPLYTLHNSNNDKELRVLENNSDLDQVLQDVQMPSKKLDFI 516

Query: 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV 535
            +    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I+
Sbjct: 517 HLH-GTKFWYQMILPPHFDKS--KKYPLLLEVYAGPCSQKADAIFRLNWATYLASTENII 573

Query: 536 VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595
           VA  DGR S  +G+ + +A  RRLGT E+ DQI  TR   + + ++D  R AIWGWSYGG
Sbjct: 574 VASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEATRQFSK-MGFVDDKRIAIWGWSYGG 632

Query: 596 YATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV 655
           Y T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++ 
Sbjct: 633 YVTSMVLGAG-SGVFKCGIAVAPVSKWEYYDSVYTERYMGLPTPEDNLDSYRNSTVMSRA 691

Query: 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           +  +  +YLL+HGT DDNVHFQQS  ++K+L  A + FQS  Y
Sbjct: 692 ENFKQVEYLLIHGTADDNVHFQQSAQISKALVDAGVDFQSMWY 734

Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones. Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|P27487|DPP4_HUMAN Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=1 SV=2

 Score =  270 bits (691), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)

Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 300 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 359

Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 360 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 404

Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 405 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 458

Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 459 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 515

Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 516 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 573

Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 574 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 632

Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 633 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 691

Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 692 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 735

Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones. Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|P14740|DPP4_RAT Dipeptidyl peptidase 4 OS=Rattus norvegicus GN=Dpp4 PE=1 SV=2

 Score =  268 bits (685), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 165/463 (35%), Positives = 250/463 (53%), Gaps = 37/463 (7%)

Query: 249 LSRVNWANESVVA-AWVNRVQNRARITRCSINEGT----CDVVFS--RDLDRGW---FEP 298
           L  V W +E  ++  W+ R+QN + +  C  ++ T    C            GW   F P
Sbjct: 298 LCDVAWVSEDRISLQWLRRIQNYSVMAICDYDKTTLVWNCPTTQEHIETSATGWCGRFRP 357

Query: 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT 358
            +   F+SDG     I+S           D + H+     D +    ++V   +T+G + 
Sbjct: 358 AEP-HFTSDGSSFYKIVSDK---------DGYKHICQFQKDRKP---EQVCTFITKGAWE 404

Query: 359 VTEILAWDEKENNVYFLSTQGS--PIVQHMYRINIADPTATPECITCDLLTSANQKCSYS 416
           V  I A     + +Y++S +    P  +++Y+I + D T   +C++CDL     ++C Y 
Sbjct: 405 VISIEAL--TSDYLYYISNEYKEMPGGRNLYKIQLTDHT-NKKCLSCDL---NPERCQYY 458

Query: 417 GATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR-LLYWDTNEDLRTALTNITLPSVEYMSV 475
             + S    YY L C GPG+P   L   T Q+ L   + N  L   L ++ +PS + +  
Sbjct: 459 SVSLSKEAKYYQLGCRGPGLPLYTLHRSTDQKELRVLEDNSALDKMLQDVQMPSKK-LDF 517

Query: 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV 535
            +        ++ LPP  D S  KKYPLLI VY GP S +    F ++W  YLA  ++I+
Sbjct: 518 IVLNETRFWYQMILPPHFDKS--KKYPLLIDVYAGPCSQKADAAFRLNWATYLASTENII 575

Query: 536 VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595
           VA  DGR S  +G+ + +A  +RLGT+E+ DQI   R   + + ++D  R AIWGWSYGG
Sbjct: 576 VASFDGRGSGYQGDKIMHAINKRLGTLEVEDQIEAARQFLK-MGFVDSKRVAIWGWSYGG 634

Query: 596 YATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV 655
           Y T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++ 
Sbjct: 635 YVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRA 693

Query: 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           +  +  +YLL+HGT DDNVHFQQS  ++K+L  A + FQ+  Y
Sbjct: 694 ENFKQVEYLLIHGTADDNVHFQQSAQISKALVDAGVDFQAMWY 736

Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones (By similarity). Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|P28843|DPP4_MOUSE Dipeptidyl peptidase 4 OS=Mus musculus GN=Dpp4 PE=1 SV=3

 Score =  265 bits (678), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 166/463 (35%), Positives = 246/463 (53%), Gaps = 40/463 (8%)

Query: 249 LSRVNWANESVVA-AWVNRVQNRARITRCSINE----GTC-----DVVFSRDLDRGWFEP 298
           L  V WA E  ++  W+ R+QN + +  C  ++      C      V  S     G F P
Sbjct: 294 LCDVVWATEERISLQWLRRIQNYSVMAICDYDKINLTWNCPSEQQHVEMSTTGWVGRFRP 353

Query: 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT 358
            +   F+SDG     I+S           D + H+     D       K    +T+G + 
Sbjct: 354 AEP-HFTSDGSSFYKIISDK---------DGYKHICHFPKDK------KDCTFITKGAWE 397

Query: 359 VTEILAWDEKENNVYFLSTQGS--PIVQHMYRINIADPTATPECITCDLLTSANQKCSYS 416
           V  I A     + +Y++S Q    P  +++Y+I + D T   +C++CDL     ++C Y 
Sbjct: 398 VISIEA--LTSDYLYYISNQYKEMPGGRNLYKIQLTDHTNV-KCLSCDL---NPERCQYY 451

Query: 417 GATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR-LLYWDTNEDLRTALTNITLPSVEYMSV 475
             +FS    YY L C GPG+P   L   T  + L   + N  L   L ++ +PS + +  
Sbjct: 452 AVSFSKEAKYYQLGCWGPGLPLYTLHRSTDHKELRVLEDNSALDRMLQDVQMPSKK-LDF 510

Query: 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV 535
            +        ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I+
Sbjct: 511 IVLNETRFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADASFRLNWATYLASTENII 568

Query: 536 VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595
           VA  DGR S  +G+ + +A  RRLGT+E+ DQI   R   + + ++D  R AIWGWSYGG
Sbjct: 569 VASFDGRGSGYQGDKIMHAINRRLGTLEVEDQIEAARQFVK-MGFVDSKRVAIWGWSYGG 627

Query: 596 YATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV 655
           Y T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLP  EDNL+ Y+ + + ++ 
Sbjct: 628 YVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPIPEDNLDHYRNSTVMSRA 686

Query: 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           +  +  +YLL+HGT DDNVHFQQS  ++K+L  A + FQ+  Y
Sbjct: 687 EHFKQVEYLLIHGTADDNVHFQQSAQISKALVDAGVDFQAMWY 729

Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones. Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	790
242005492	682	Dipeptidyl peptidase 4, putative [Pedicu	0.586	0.678	0.497	1e-130
383856205	786	PREDICTED: venom dipeptidyl peptidase 4-	0.610	0.613	0.467	1e-126
345485878	797	PREDICTED: venom dipeptidyl peptidase 4-	0.588	0.583	0.461	1e-123
350407592	784	PREDICTED: venom dipeptidyl peptidase 4-	0.618	0.623	0.464	1e-123
307194439	658	Dipeptidyl peptidase 4 [Harpegnathos sal	0.584	0.702	0.476	1e-123
270007070	1890	hypothetical protein TcasGA2_TC013520 [T	0.577	0.241	0.471	1e-123
340717532	795	PREDICTED: venom dipeptidyl peptidase 4-	0.618	0.615	0.458	1e-123
189237385	824	PREDICTED: similar to dipeptidyl-peptida	0.608	0.583	0.457	1e-122
328778949	795	PREDICTED: venom dipeptidyl peptidase 4-	0.616	0.612	0.462	1e-121
321476311	840	hypothetical protein DAPPUDRAFT_307138 [	0.568	0.534	0.427	1e-107

>gi|242005492|ref|XP_002423599.1| Dipeptidyl peptidase 4, putative [Pediculus humanus corporis] gi|212506747|gb|EEB10861.1| Dipeptidyl peptidase 4, putative [Pediculus humanus corporis]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/488 (49%), Positives = 316/488 (64%), Gaps = 25/488 (5%)

Query: 245 VEPVLSRVNWANE-SVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR 303
            EP+L+ V W +E  + A W+NRVQN + +T C+  +  C  + +   D+GW E F    
Sbjct: 213 AEPILTAVTWPDEDQLSAVWMNRVQNMSYLTLCNSKQSDCRNILTIMEDKGWVELFVPPL 272

Query: 304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL 363
           FSSD  KM LIL  NQ +DG                D     + +  PLT+G++TVT+IL
Sbjct: 273 FSSDASKMALILPQNQGADG----------------DFRATSEYIVKPLTKGKYTVTDIL 316

Query: 364 AWDEKENNVYFLST-QGSPIVQHMYRINIADPTATPECITCDLLTS-ANQKCSYSGATFS 421
            +D+  N VY+L+T +  P   H+Y ++  D    PEC++C + T   N+ C Y+ A F 
Sbjct: 317 FYDDVRNLVYYLATAENHPEQLHLYVVS-TDGNKDPECLSCKVKTELENKSCLYNRAFFG 375

Query: 422 TNVSY-YVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPN 480
              S  Y LSC+GPGIPEI +FD    +L+ W+ NE ++  L+   LP++E ++VP+   
Sbjct: 376 KKGSTTYALSCLGPGIPEISIFDMNNNKLMTWENNEFIKNKLSAKVLPTIERLTVPVSGG 435

Query: 481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYID 540
             A V LFLPP ID SG  KYPLL++VY GP S+Q TE+F+ DWN YL  NK I+ A ID
Sbjct: 436 FNAVVVLFLPPNIDKSGSTKYPLLVNVYAGPDSYQATEKFNADWNSYLTSNKSIICATID 495

Query: 541 GRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGL 600
           GR S LKGN + ++ YRRLGT EI DQI VT YLQ+N PYID  RTAIWGWSYGGYAT +
Sbjct: 496 GRGSGLKGNKMLFSIYRRLGTYEIEDQIEVTNYLQQNYPYIDSDRTAIWGWSYGGYATAM 555

Query: 601 ALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD 660
           ALA D S VFKCGISVAPVTDW YYDTIY+ERYMGLP  +DNL GY  A LN+KV+ IR 
Sbjct: 556 ALAQDRSKVFKCGISVAPVTDWAYYDTIYTERYMGLPRRDDNLLGYAEAQLNDKVENIRT 615

Query: 661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKV 720
           KQ+ LVHGT+DDNVH+QQSMML+K+L  +DI+FQ Q Y   P  E  L G +   L + +
Sbjct: 616 KQFYLVHGTLDDNVHYQQSMMLSKALSQSDILFQQQTY---PDEEHGLAGVR-PHLYHSL 671

Query: 721 DRIRDKQY 728
           ++  DK +
Sbjct: 672 EKFLDKCF 679

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856205|ref|XP_003703600.1| PREDICTED: venom dipeptidyl peptidase 4-like [Megachile rotundata]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/505 (46%), Positives = 324/505 (64%), Gaps = 23/505 (4%)

Query: 232 VTEILAWDEKENNVEPVLSRVNWANESVV-AAWVNRVQNRARITRCSINEG--TCDVVFS 288
           +TEI  +  + ++ E +LS V +  + +V A W+NRVQN+A    C I++    C    S
Sbjct: 294 LTEI-EYPAELSSTERILSAVAFPTDDLVYATWMNRVQNKAYFRYCYIHDSGPNCTNALS 352

Query: 289 RDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV 348
                GW E F+   FS DG   L IL   Q  D       W H+  +     +G+    
Sbjct: 353 YSEKGGWVEQFEAPLFSEDGDSFLTILPQRQNDD-----SHWRHVVRV-----SGVSSGK 402

Query: 349 P--VPLTRGRFTVTEILAWDEKENNVYFLST-QGSPIVQHMYRINI-ADPTATPECITCD 404
           P   PLT G   VTEI++WD++ + +Y+L+T +    VQH+YRI++ A     PEC++CD
Sbjct: 403 PNTEPLTSGHLVVTEIVSWDQERSYLYYLATTERDSAVQHLYRISLRASDRKPPECLSCD 462

Query: 405 LLTSAN-QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALT 463
           ++   +  +C Y+ A FST+ S+Y L+C GPG+P+I ++++   +LL W++NE +   + 
Sbjct: 463 IVRETDGNRCLYNTAKFSTDHSHYALTCAGPGVPDIAIYNRNSTKLLVWESNEAVSEIIE 522

Query: 464 NITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD 523
               P V  + VP+Q   EA+V+L +PP  D +G  KYP+LI VYGGP S+QVTE+F+VD
Sbjct: 523 ERLQPIVRRLKVPVQGGFEARVRLLIPPNADLTGATKYPMLIFVYGGPDSYQVTEKFNVD 582

Query: 524 WNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDK 583
           W  YL  NK I+ A IDGR S L  N + +AGYR LGTVEI DQINVTRYLQ+  P+ID+
Sbjct: 583 WGTYLVTNKSIIYATIDGRGSGLMDNGMLFAGYRNLGTVEIADQINVTRYLQDTQPFIDR 642

Query: 584 TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNL 643
           TRTAIWGWSYGGYATG+ LA+D   VFKCG+SVAPVTDW  YD+IY+ER+MGLPTFEDNL
Sbjct: 643 TRTAIWGWSYGGYATGMTLAMDYQGVFKCGMSVAPVTDWALYDSIYTERFMGLPTFEDNL 702

Query: 644 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPT 703
            GY+   L NKVD I+ K Y L+HGT+DDNVH+QQS++LAK L+  DI+F+ Q Y    T
Sbjct: 703 HGYEKGQLLNKVDNIKTKMYYLIHGTLDDNVHYQQSLLLAKVLEQKDILFRQQTY----T 758

Query: 704 FEDNLEGYKIAALNNKVDRIRDKQY 728
            ED+      A L + ++   D+ Y
Sbjct: 759 DEDHGIAQSRAHLYHSLENFLDECY 783

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345485878|ref|XP_001603694.2| PREDICTED: venom dipeptidyl peptidase 4-like [Nasonia vitripennis]

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/477 (46%), Positives = 313/477 (65%), Gaps = 12/477 (2%)

Query: 225 LTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAA-WVNRVQNRARITRCSINEGTC 283
           + +G  ++ EI A   K +  E +L+ V++  + +V+A W+NRVQN+A    C++ +  C
Sbjct: 300 VVKGNVSLIEIEA-PLKLSYTERILASVSFPTDGLVSAIWMNRVQNQAYFHMCNVIDRNC 358

Query: 284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG 343
               +     GW E F    +S DG   +LIL   Q + G      W H   +    +A 
Sbjct: 359 STALAYKERNGWVEQFVPPLYSKDGTAFVLILPQKQGNRGD-----WRHAVLVT---EAT 410

Query: 344 IKDKVPVPLTRGRFTVTEILAWDEKENNVYFLST-QGSPIVQHMYRINIADPTATPECIT 402
            K  +   LT G F VTEI+AWDE  + VY+L+T +  P  +H+YR++I D     +C++
Sbjct: 411 TKHPIVTALTSGLFVVTEIVAWDEDNHYVYYLATSEQDPAQKHLYRVSILDRNRRSDCLS 470

Query: 403 CDLLTSANQK-CSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTA 461
           C++ + ++   C Y+ A FS + S+YVL+C GPGIPEI + ++   ++  W++N  +   
Sbjct: 471 CEIKSESDGSYCLYNSAEFSKDNSHYVLTCAGPGIPEITIHNRNSTKVYAWESNIAVAEL 530

Query: 462 LTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS 521
           +   + P+V+  +VP+    EAQVKL LPP  D SG  KYP+L++VYGGP + +VTE+F+
Sbjct: 531 IAEKSRPTVKRFTVPVPGGFEAQVKLLLPPNADLSGKTKYPMLLYVYGGPDTNEVTEKFN 590

Query: 522 VDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI 581
           +DW  YL  NK I+ A IDGR S LKGN++ +A YR LGTVEI DQINVTR+LQ +  YI
Sbjct: 591 IDWGTYLVTNKSIIYASIDGRGSGLKGNSMMFAVYRNLGTVEIMDQINVTRHLQNSFSYI 650

Query: 582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFED 641
           D++RTAIWGWSYGGYATG+ALA+D   +FKCG+SVAPVTDW  YD++Y+ER+MGLP   D
Sbjct: 651 DRSRTAIWGWSYGGYATGMALAMDFDGIFKCGLSVAPVTDWTLYDSVYTERFMGLPNAAD 710

Query: 642 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           NL GY  + L NKVD I++K Y L+HGT+DDNVH+QQSM+LAK L+  DI+F+ Q Y
Sbjct: 711 NLGGYDQSQLLNKVDNIKNKGYYLIHGTLDDNVHYQQSMLLAKMLEQKDILFRQQTY 767

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350407592|ref|XP_003488136.1| PREDICTED: venom dipeptidyl peptidase 4-like [Bombus impatiens]

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/510 (46%), Positives = 322/510 (63%), Gaps = 21/510 (4%)

Query: 225 LTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVV-AAWVNRVQNRARITRCSINEG-- 281
           + +G  ++TEI   DE  +  E +LS V +  +++V A W+NRVQN A    CS+++   
Sbjct: 287 VVQGNVSLTEIEHPDELASE-ERILSAVAFPTDNLVYATWMNRVQNEAYFRFCSVHDSLP 345

Query: 282 TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQ 341
            C          GW E F+   F+ DG   L IL   Q  D S     W H   I     
Sbjct: 346 NCTTALKHSERHGWVEQFEPPMFTDDGDSFLTILPQKQH-DASY----WRHAVAITNVSS 400

Query: 342 AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLST-QGSPIVQHMYRINI-ADPTATPE 399
              +      LT GRF VTEI++WD+K + +Y+L+T +    VQH+YRI+   D    P+
Sbjct: 401 GKTRS---FALTSGRFVVTEIVSWDQKNSYLYYLATTEEESAVQHLYRISTKTDGGRKPK 457

Query: 400 CITCDLLTSANQ-KCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDL 458
           C++C ++   ++ +C Y+ A FST+ S+YVL+C GPG+P+I +++K   +LL W+ NE +
Sbjct: 458 CLSCGIVRETDRNRCLYNTAKFSTDHSHYVLTCAGPGVPDIAIYNKDSSKLLAWEENEAV 517

Query: 459 RTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE 518
              +   + P V    VP+    EA+V+L +PP  D SG  KYP+LI VYGGP S+QVTE
Sbjct: 518 SEIIAEKSQPVVRRYKVPVPGGFEARVRLLIPPNADLSGATKYPMLIFVYGGPDSYQVTE 577

Query: 519 RFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578
           +F+VDW  YL  NK I+ A IDGR S L  N + +AGYR LGTVEI DQINVTRYLQ+ L
Sbjct: 578 KFNVDWGTYLVTNKSIIYATIDGRGSGLMDNGMLFAGYRNLGTVEIADQINVTRYLQDTL 637

Query: 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT 638
           P+ID+TRTAIWGWSYGGYATG+ LA+D   VFKCG+SVAPVTDW  YD+IY+ER+MGLP+
Sbjct: 638 PFIDRTRTAIWGWSYGGYATGMTLAMDYHGVFKCGMSVAPVTDWALYDSIYTERFMGLPS 697

Query: 639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
             DNL GY+   L NKVD I+ K Y L+HGT+DDNVH+QQS++LAK L+  DI+F+ Q Y
Sbjct: 698 --DNLHGYEQGQLLNKVDNIKTKMYYLIHGTLDDNVHYQQSLLLAKVLEQKDILFRQQTY 755

Query: 699 MGLPTFEDNLEGYKIAALNNKVDRIRDKQY 728
               T ED+      A L + ++   D+ Y
Sbjct: 756 ----TDEDHGIAQSRAHLYHSLENFLDECY 781

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307194439|gb|EFN76737.1| Dipeptidyl peptidase 4 [Harpegnathos saltator]

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/476 (47%), Positives = 308/476 (64%), Gaps = 14/476 (2%)

Query: 228 GRFTVTEILAWDEKENNVEPVLSRVNW-ANESVVAAWVNRVQNRARITRCSINE--GTCD 284
           G  T+ EI    E  +N E VLS V++  +E V A W+NRVQN+A    C+++     C 
Sbjct: 162 GNMTLVEIEHPPEL-SNAERVLSAVDFPTDELVYATWMNRVQNKAYFQLCNVDNLLPNCT 220

Query: 285 VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI 344
              S     GW E F+   FS DG   +LIL   Q+ DGS     W H+  +     A  
Sbjct: 221 TALSYSEKSGWVEQFEAPVFSDDGTSFILILPQKQK-DGS----DWRHVVLVT---NATS 272

Query: 345 KDKVPVPLTRGRFTVTEILAWDEKENNVYFLST-QGSPIVQHMYRINIADPTATPECITC 403
            +     LT G F VTEI+ WD++++ +Y+L+T +     QH+YR ++ DP     C++C
Sbjct: 273 DNPTATALTSGYFVVTEIVTWDQEDSYLYYLATSEHDSAGQHLYRASLLDPERKSACLSC 332

Query: 404 DLLTSAN-QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTAL 462
           +++   +  +C Y+ A FS + S+YVL+C GPG+P I +++K    L  W+ N  +   +
Sbjct: 333 NIVRETDGSRCLYNTAKFSADNSHYVLTCAGPGVPSIAIYNKNSTLLSVWEDNRAVAEII 392

Query: 463 TNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV 522
              + P V   ++P+  +  AQV+L +PPG D SG  KYP+L+ VYGGP S  VTE+F+V
Sbjct: 393 AEKSQPIVHRYTLPVSDDFNAQVRLLIPPGADLSGATKYPMLVQVYGGPDSNLVTEKFNV 452

Query: 523 DWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID 582
           DW   L  NK +V A IDGR S L GN + +AGYRRLGTVEI DQINVTR+LQ+ LP+ID
Sbjct: 453 DWGTCLVTNKSVVHAVIDGRGSGLMGNDMLFAGYRRLGTVEIIDQINVTRHLQDKLPFID 512

Query: 583 KTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDN 642
           +TRTAIWGWSYGGYATG+ LA+D   VFKCG+SVAPVTDW  YD+IY+ER+MGLPT  DN
Sbjct: 513 RTRTAIWGWSYGGYATGMTLAMDLDGVFKCGMSVAPVTDWALYDSIYTERFMGLPTTTDN 572

Query: 643 LEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           L+GY+   L NKV+ I++K Y L+HGTMDDNVH+QQS+MLAK L+  DI+F+ Q Y
Sbjct: 573 LQGYEQGQLLNKVENIKNKMYYLIHGTMDDNVHYQQSLMLAKVLEQKDILFRQQTY 628

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270007070|gb|EFA03518.1| hypothetical protein TcasGA2_TC013520 [Tribolium castaneum]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/473 (47%), Positives = 324/473 (68%), Gaps = 17/473 (3%)

Query: 246 EPVLSRVNWANESVVAA-WVNRVQNRARITRCSINEGTCDVVFSRDLDR--GWFEPFDHL 302
           +P+L+ V+WA ++VV+A W+NRVQN A I   +I   +  +   R+L++  GW E F   
Sbjct: 328 QPILTTVSWATDNVVSAIWMNRVQNNAFIVTYTITPDSYQLETIRNLNQPSGWLELFTAP 387

Query: 303 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI 362
            +S DG K+ LILSH+Q +D    + S+ H+  +   + +  +     PLTRG F VTE+
Sbjct: 388 LWSKDGSKLALILSHDQGND----LGSYRHVVMLSRTENSPSE-----PLTRGTFVVTEL 438

Query: 363 LAWDEKENNVYFLS-TQGSPIVQHMYRINIADPTATPECITCDLLT-SANQKCSYSGATF 420
           L W+ ++N +++L+ T+  P VQH+Y +++   +   EC++C + + +  Q+C Y+ A F
Sbjct: 439 LGWNHEQNKIFYLANTEADPAVQHLYSVSVE--SKRTECLSCGVKSKNKRQECLYNVAEF 496

Query: 421 STNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPN 480
           S + S+YVL+C GP +P+I L+    ++LL WD N+DL+  L +  LP+V+  +  ++  
Sbjct: 497 SKDASHYVLTCAGPDVPDIALYS-LEKKLLDWDDNKDLQELLGDKVLPTVKRTTFKVEGG 555

Query: 481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYID 540
            EAQV L LPP +DTSG  KYP+L++VY GP SFQV E+F+VDW  YLA NK I+ A ID
Sbjct: 556 FEAQVTLKLPPNMDTSGETKYPMLLNVYAGPDSFQVVEKFNVDWGSYLAANKSIIYATID 615

Query: 541 GRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGL 600
           GR+S LKG+ + +A YR LGTVEI DQINVT+ +Q+   ++DK+RTA+WGWSYGGYA+G+
Sbjct: 616 GRSSGLKGDKMLFASYRHLGTVEIEDQINVTKQIQDTFKFVDKSRTAVWGWSYGGYASGM 675

Query: 601 ALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD 660
            LA D S+VFKCGISVAPVTDW  YD+IY+ER+MGLP+ EDN +GY+ A L  K + IRD
Sbjct: 676 ILANDNSSVFKCGISVAPVTDWTLYDSIYTERFMGLPSIEDNYQGYRRANLLLKSEGIRD 735

Query: 661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKI 713
           KQY L+HGT DDNVH+QQSM+ A+ L+  DI+F+          + + +GYK+
Sbjct: 736 KQYFLIHGTYDDNVHYQQSMLWARVLEQNDILFRQLSITLKVRGQGSFKGYKL 788

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717532|ref|XP_003397235.1| PREDICTED: venom dipeptidyl peptidase 4-like [Bombus terrestris]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/510 (45%), Positives = 320/510 (62%), Gaps = 21/510 (4%)

Query: 225 LTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVV-AAWVNRVQNRARITRCSINEG-- 281
           + +G  ++TEI   DE  +  E +LS V +  +++V A W+NRVQN A    CS+++   
Sbjct: 298 VVQGNVSLTEIEHPDELASE-ERILSAVAFPTDNLVYATWMNRVQNEAYFRFCSVHDSLP 356

Query: 282 TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQ 341
            C          GW E F+   F+ DG   L IL   Q          W H   I     
Sbjct: 357 NCTTALKHSERHGWVEQFEPPMFTDDGDSFLTILPQKQHD-----ASYWRHAVAITNVSS 411

Query: 342 AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLST-QGSPIVQHMYRINIADPTA-TPE 399
              +      LT GRF VTEI++WD+K + +Y+L+T +    VQH+YRI+        P+
Sbjct: 412 GKTRS---FALTSGRFVVTEIVSWDQKNSYLYYLATTEEESAVQHLYRISTKTGGGRKPK 468

Query: 400 CITCDLLTSANQ-KCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDL 458
           C++C ++   ++ +C Y+ A FST+ S+YVL+C GPG+P+I++++K   +LL W+ NE +
Sbjct: 469 CLSCGIVRETDRNRCLYNTAKFSTDHSHYVLTCAGPGVPDIVIYNKDSSKLLAWEENEAV 528

Query: 459 RTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE 518
              +   + P V    VP+    EA+V+L +PP  D SG  KYP+LI VYGGP S+QVTE
Sbjct: 529 SEIIAEKSQPVVRRYKVPVPGGFEARVRLLIPPNADLSGATKYPMLIFVYGGPDSYQVTE 588

Query: 519 RFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578
           +F+VDW  YL  NK I+ A IDGR S L  N + +AGYR LGTVEI DQINVTRYLQ+ L
Sbjct: 589 KFNVDWGTYLVTNKSIIYATIDGRGSGLMDNGMLFAGYRNLGTVEIADQINVTRYLQDTL 648

Query: 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT 638
           P+ID+TRTAIWGWSYGGYATG+ LA+D   VFKCG+SVAPVTDW  YD+IY+ER+MGLP+
Sbjct: 649 PFIDRTRTAIWGWSYGGYATGMTLAMDYHGVFKCGMSVAPVTDWALYDSIYTERFMGLPS 708

Query: 639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
             DNL GY+   L NKVD I+ K Y L+HGT+DDNVH+QQS++LAK L+  DI+F+ Q Y
Sbjct: 709 --DNLHGYEQGQLLNKVDNIKTKMYYLIHGTLDDNVHYQQSLLLAKVLEQKDILFRQQTY 766

Query: 699 MGLPTFEDNLEGYKIAALNNKVDRIRDKQY 728
               T ED+      A L + ++   D+ Y
Sbjct: 767 ----TDEDHGIAQSRAHLYHSLENFLDECY 792

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189237385|ref|XP_972016.2| PREDICTED: similar to dipeptidyl-peptidase [Tribolium castaneum]

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/503 (45%), Positives = 329/503 (65%), Gaps = 22/503 (4%)

Query: 206 LTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWD--EKENNVEPVLSRVNWANESVVAA- 262
           L  +DL++   IK   P     G      +  +D      N  P+L+ V+WA ++VV+A 
Sbjct: 303 LHCVDLNNVTDIKKLDPPKDLAGSQQYVNVHPYDTFSSSYNFRPILTTVSWATDNVVSAI 362

Query: 263 WVNRVQNRARITRCSINEG-----TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSH 317
           W+NRVQN A I   +I        TC  + + +   GW E F    +S DG K+ LILSH
Sbjct: 363 WMNRVQNNAFIVTYTITPDSYQLETCPQIRNLNQPSGWLELFTAPLWSKDGSKLALILSH 422

Query: 318 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLS- 376
           +Q +D    + S+ H+  +   + +  +     PLTRG F VTE+L W+ ++N +++L+ 
Sbjct: 423 DQGND----LGSYRHVVMLSRTENSPSE-----PLTRGTFVVTELLGWNHEQNKIFYLAN 473

Query: 377 TQGSPIVQHMYRINIADPTATPECITCDLLT-SANQKCSYSGATFSTNVSYYVLSCIGPG 435
           T+  P VQH+Y +++   +   EC++C + + +  Q+C Y+ A FS + S+YVL+C GP 
Sbjct: 474 TEADPAVQHLYSVSVE--SKRTECLSCGVKSKNKRQECLYNVAEFSKDASHYVLTCAGPD 531

Query: 436 IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDT 495
           +P+I L+    ++LL WD N+DL+  L +  LP+V+  +  ++   EAQV L LPP +DT
Sbjct: 532 VPDIALY-SLEKKLLDWDDNKDLQELLGDKVLPTVKRTTFKVEGGFEAQVTLKLPPNMDT 590

Query: 496 SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG 555
           SG  KYP+L++VY GP SFQV E+F+VDW  YLA NK I+ A IDGR+S LKG+ + +A 
Sbjct: 591 SGETKYPMLLNVYAGPDSFQVVEKFNVDWGSYLAANKSIIYATIDGRSSGLKGDKMLFAS 650

Query: 556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGIS 615
           YR LGTVEI DQINVT+ +Q+   ++DK+RTA+WGWSYGGYA+G+ LA D S+VFKCGIS
Sbjct: 651 YRHLGTVEIEDQINVTKQIQDTFKFVDKSRTAVWGWSYGGYASGMILANDNSSVFKCGIS 710

Query: 616 VAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH 675
           VAPVTDW  YD+IY+ER+MGLP+ EDN +GY+ A L  K + IRDKQY L+HGT DDNVH
Sbjct: 711 VAPVTDWTLYDSIYTERFMGLPSIEDNYQGYRRANLLLKSEGIRDKQYFLIHGTYDDNVH 770

Query: 676 FQQSMMLAKSLQHADIMFQSQRY 698
           +QQSM+ A+ L+  DI+F+   Y
Sbjct: 771 YQQSMLWARVLEQNDILFRQLSY 793

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778949|ref|XP_394703.4| PREDICTED: venom dipeptidyl peptidase 4-like [Apis mellifera]

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/512 (46%), Positives = 321/512 (62%), Gaps = 25/512 (4%)

Query: 225 LTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVV-AAWVNRVQNRARITRCSINEG-- 281
           + +G   +TEI     K +  E +LS V +  +++V A W+NRVQNRA    C ++    
Sbjct: 298 VIQGNTNLTEI-EHPNKLSTEERILSAVAFPTDNLVYATWMNRVQNRAYFHFCYVHGHLP 356

Query: 282 TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQ 341
            C    +     GW E F+   FS DG   L IL   Q  DGS     W H   I     
Sbjct: 357 NCTTALTHIESHGWVEQFEPPMFSDDGDTFLTILPKKQH-DGS----YWRHAVAI----- 406

Query: 342 AGIKDKVP--VPLTRGRFTVTEILAWDEKENNVYFLST-QGSPIVQHMYRINIADPT-AT 397
             +    P    LT GRF VTEI++WD+K++ +Y+L+T +    VQH+YRI+    +   
Sbjct: 407 TNVSSTTPRKTALTSGRFVVTEIVSWDQKKSYLYYLATTEEESAVQHLYRISTKGTSDRK 466

Query: 398 PECITCDLLTSANQ-KCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNE 456
           P+C+TC ++   ++ +C Y+ A FST+ S YVL+C GPG+P+I ++++   ++L W+ NE
Sbjct: 467 PKCLTCGIVRETDRNRCLYNTAKFSTDHSNYVLTCAGPGVPDISIYNRNSTKMLTWEANE 526

Query: 457 DLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQV 516
            +   +   + P V    VP+    EA+V+L +PP  D SG  KYP+LI VYGGP S+QV
Sbjct: 527 AVSEIIAEKSQPVVRRFKVPVPGGFEARVRLLIPPNADLSGATKYPMLIFVYGGPDSYQV 586

Query: 517 TERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE 576
           TE+F VDW  YL  NK I+ A IDGR S L  N + +AGYR LGTVEI DQINVTRYLQ+
Sbjct: 587 TEKFDVDWGTYLVTNKSIIYATIDGRGSGLMDNGMLFAGYRNLGTVEIADQINVTRYLQD 646

Query: 577 NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGL 636
            LP+ID+TRTAIWGWSYGGYATG+ LA+D   VFKCG+SVAPVTDW  YD+IY+ER+MGL
Sbjct: 647 KLPFIDRTRTAIWGWSYGGYATGMTLAMDYHGVFKCGMSVAPVTDWALYDSIYTERFMGL 706

Query: 637 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQ 696
           P+  DNL GY+   L NKVD I+ K Y L+HGT+DDNVH+QQS++LAK L+  DI+F+ Q
Sbjct: 707 PS--DNLHGYEQGQLLNKVDNIKTKMYYLIHGTLDDNVHYQQSLLLAKVLEQKDILFRQQ 764

Query: 697 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQY 728
            Y    T ED+      A L + ++   D+ Y
Sbjct: 765 TY----TDEDHGIAQSRAHLYHSLENFLDECY 792

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321476311|gb|EFX87272.1| hypothetical protein DAPPUDRAFT_307138 [Daphnia pulex]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/477 (42%), Positives = 298/477 (62%), Gaps = 28/477 (5%)

Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLD--RGWFEPFDHLRFS 305
            + V WA ++ V+ AW+NR QN + ++ C+I  G C  V   ++   +GW + +   +FS
Sbjct: 354 FTTVAWATDDEVMIAWLNRHQNVSLLSFCNITGGICQTVNEYEISEPKGWVDQYSPPKFS 413

Query: 306 SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW 365
           ++G+  L+IL  +Q +D    V ++ HL   D D       K    L+ GR+ VTEIL W
Sbjct: 414 ANGRNFLIILPVDQLND----VGNFKHLVLYDRDT------KQSRALSSGRWEVTEILGW 463

Query: 366 DEKENNVYFLSTQ-GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNV 424
           DE  +  YF+ T    P V+HMY+++         C+TC  L + +++C+Y+   FST++
Sbjct: 464 DEPNHLAYFIGTAVDKPAVRHMYKVSTG-AVGDVVCVTCGTLNADSKECTYNTIEFSTDM 522

Query: 425 SYYVLSCIGPGIPEIMLFDKTGQRLL--------YWDTNED-LRTALTNITLPSVEYMSV 475
            YYV  C GP  P  ++ +    ++L        +  TN D LR  L   ++P    M V
Sbjct: 523 GYYVHGCDGPNAPRSVIKEAAVSKILIVFTDREVFLVTNNDVLRDRLAQKSMPRPLTMQV 582

Query: 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV 535
           P+  N  AQVKL LPP ++ +   +YP+L++VYGGPSS QV++R+ VDW  +L+ ++ ++
Sbjct: 583 PLDGNYFAQVKLLLPPSLNRNRASQYPMLVYVYGGPSSQQVSDRYRVDWGYHLSTSRGVI 642

Query: 536 VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595
            A IDGR S  +G+ + +  YRR+GTVEI DQI V ++L+ENLP++D  +TAIWGWSYGG
Sbjct: 643 YALIDGRGSGFQGDKMLHEIYRRMGTVEIQDQIKVAKFLKENLPFVDGNKTAIWGWSYGG 702

Query: 596 YATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV 655
           YAT  ALA D   VFKCG+SVAPVT+WIYYD+IY+ERYMGLPT EDNL+ Y    +    
Sbjct: 703 YATASALAQDTEGVFKCGMSVAPVTNWIYYDSIYTERYMGLPTAEDNLKAYDDGDVCKYP 762

Query: 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYM----GLPTFEDNL 708
           +  R KQ+ L+HGT DDNVH+QQS+ LAKSL+ AD++F+ Q Y      + TF+ +L
Sbjct: 763 ENFRGKQFYLIHGTADDNVHYQQSLQLAKSLEGADVLFRQQSYTDENHSINTFKKHL 819

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	790
FB|FBgn0259175	1040	ome "omega" [Drosophila melano	0.548	0.416	0.409	1.8e-99
UNIPROTKB|E2RD94	760	FAP "Uncharacterized protein"	0.535	0.556	0.389	3.2e-85
RGD|621253	761	Fap "fibroblast activation pro	0.530	0.550	0.400	6.6e-85
UNIPROTKB|F1LMH7	761	Fap "Protein Fap" [Rattus norv	0.530	0.550	0.400	6.6e-85
UNIPROTKB|F1M8Q0	728	Fap "Protein Fap" [Rattus norv	0.530	0.575	0.400	6.6e-85
FB|FBgn0031835	935	CG11319 [Drosophila melanogast	0.329	0.278	0.458	9.2e-85
UNIPROTKB|B4DLR2	735	FAP "cDNA FLJ60298, highly sim	0.532	0.572	0.394	3.6e-84
UNIPROTKB|Q12884	760	FAP "Seprase" [Homo sapiens (t	0.532	0.553	0.394	3.6e-84
UNIPROTKB|A5D7B7	760	FAP "Uncharacterized protein"	0.532	0.553	0.387	7.4e-84
MGI|MGI:109608	761	Fap "fibroblast activation pro	0.537	0.558	0.395	1.5e-83

FB|FBgn0259175 ome "omega" [Drosophila melanogaster (taxid:7227)]

 Score = 925 (330.7 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
 Identities = 189/461 (40%), Positives = 287/461 (62%)

Query:   248 VLSRVNWANE-SVVAAWVNRVQNRARI-TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFS 305
             +++ V+W ++ +V++ W+NR+QN A + T   +N     V++S +   GW + +     +
Sbjct:   562 IVTVVSWVDDDNVLSIWMNRIQNAAYVVTFDGLNR---KVIYSAESKTGWVDLYTAPFRN 618

Query:   306 SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW 365
              +G ++  +L HN          ++ H+  +     A  + +   PLT G++ V  IL W
Sbjct:   619 RNGSRLAFVLPHN----------NYKHVQLLS-STVASSEPQALEPLTEGKYVVDSILHW 667

Query:   366 DEKENNVYFLS-TQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNV 424
             D K + +++ + T+  P   H+Y I  A    +P+C+TC+L+ S + + +Y  ATF+ N 
Sbjct:   668 DGKNDIIFYTANTEDHPEQLHLYAIR-ALAKQSPKCLTCNLIKSGDVQQTYFSATFNDN- 725

Query:   425 SYYVLSCIGPGIPEIMLFD---KTGQ----RLLYWDTNEDLRTALTNITLPSVEYMSVPI 477
             ++ V++ +GPGIP   +++   +  Q    ++L W+TNE LR  L  + LPS + ++V I
Sbjct:   726 NHIVITSLGPGIPTTHIYEWKYENSQVVISKVLDWETNESLRAKLKGVALPSHKILTVDI 785

Query:   478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVA 537
                 +A+V L LPP +DTSG  KYP+L+ VYGGP S+ VT ++ VDW  YL+ N+ ++ A
Sbjct:   786 DGGFQAKVLLQLPPNLDTSGATKYPMLVDVYGGPDSYSVTNKWMVDWGTYLSSNQSVIYA 845

Query:   538 YIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYA 597
              IDGR S L+G +L +A Y +LGTVEI DQINVT+ L     YID     IWGWSYGGYA
Sbjct:   846 KIDGRGSGLRGESLLHAIYLKLGTVEISDQINVTQKLSTLFNYIDPDHVGIWGWSYGGYA 905

Query:   598 TGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDR 657
               +ALA D + VFKC  S+APVTDW YYD+IY+ERYMGLP    N  GY  + L+    +
Sbjct:   906 AAMALANDEAKVFKCAASIAPVTDWAYYDSIYTERYMGLPN--TNELGYANSRLSTMAVK 963

Query:   658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
             +R K+YLLVHGT+DDNVH+QQ+M+LAK+L+  DI+F+   Y
Sbjct:   964 LRGKKYLLVHGTLDDNVHYQQAMILAKNLERQDILFKQISY 1004

GO:0008239 "dipeptidyl-peptidase activity" evidence=ISS;IDA

GO:0008236 "serine-type peptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E2RD94 FAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 760 (272.6 bits), Expect = 3.2e-85, Sum P(3) = 3.2e-85
 Identities = 180/462 (38%), Positives = 260/462 (56%)

Query:   250 SRVNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDG 308
             S + W  +E V   W+ R+QN + ++ C   EG      + D  +      +H+  S  G
Sbjct:   294 SWLTWVTDERVCLQWLKRIQNVSVLSICDFREGWQ----TWDCPKAQ----EHIEESRTG 345

Query:   309 KKMLLILSHNQESDGSTPVDSWDHLTFIDL-DDQAG------IKDKVP--VPLTRGRFTV 359
                   +S        TPV S+D +++  +  D+ G      IKD V   + +T G++  
Sbjct:   346 WAGGFFVS--------TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEA 397

Query:   360 TEILAWDEKENNVYFLSTQGS--PIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
               I      ++++++ S +    P  +++YRI+I     + +CITC L     ++C Y  
Sbjct:   398 INIFR--VTQDSLFYSSNEFEDYPGRRNIYRISIGSSPPSKKCITCHL---RKERCQYYT 452

Query:   418 ATFSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMSVP 476
             A+FS    YY L C GPG+P   L D  T Q +   + N++L  AL NI LP  E   + 
Sbjct:   453 ASFSDYAKYYALICYGPGLPISTLHDGHTDQEIKILEENKELENALKNIQLPKEEIKKLE 512

Query:   477 IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVV 536
             +  ++    K+ LPP  D S  KKYPLLI VYGGP S  V   FS++W  YLA  + IV+
Sbjct:   513 VD-DITLWYKMMLPPRFDRS--KKYPLLIQVYGGPCSQSVKSVFSINWISYLASKEGIVI 569

Query:   537 AYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGY 596
             A +DGR +A +G+ L YA YR+LG  E+ DQI   R   E + +ID+ R AIWGWSYGGY
Sbjct:   570 ALVDGRGTAYQGDKLLYAVYRKLGVYEVEDQITAVRKFIE-MGFIDEKRIAIWGWSYGGY 628

Query:   597 ATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVD 656
              + LALA   + +FKCGI+VAPV+ W YY +IY+ER+MGLPT  DNLE YK + +  + +
Sbjct:   629 VSSLALA-SGTGLFKCGIAVAPVSSWEYYASIYTERFMGLPTKNDNLEHYKNSTVMARAE 687

Query:   657 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
               R+  YLL+HGT DDNVHFQ S  +AK+L +A + FQ+  Y
Sbjct:   688 YFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 729

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0010716 "negative regulation of extracellular matrix disassembly" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0002020 "protease binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

RGD|621253 Fap "fibroblast activation protein, alpha" [Rattus norvegicus (taxid:10116)]

 Score = 761 (272.9 bits), Expect = 6.6e-85, Sum P(3) = 6.6e-85
 Identities = 185/462 (40%), Positives = 261/462 (56%)

Query:   252 VNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPF--DHLRFSSDG 308
             + W  NE V   W+ RVQN   ++  SI    CD  F  D    W  P   +H+  S  G
Sbjct:   296 LTWVTNERVCLQWLKRVQN---VSVLSI----CD--FREDW-HAWDCPKNQEHIEESRTG 345

Query:   309 KKMLLILSHNQESDGSTPVDSWDHLTFIDL-DDQAG------IKDKVP--VPLTRGRFTV 359
                   +S        TP  S D  ++  +  D+ G      IKD V   + +T G++  
Sbjct:   346 WAGGFFVS--------TPAFSQDAASYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEA 397

Query:   360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
               I  +   ++++++ S +  G P  +++YRI+I +   + +C+TC L     ++C Y  
Sbjct:   398 --IYIFRVTQDSLFYSSNEFEGYPGRRNIYRISIGNSPPSKKCVTCHL---RKERCQYYT 452

Query:   418 ATFSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMSVP 476
             A+FS    YY L C GPG+P   L D +T Q +   + N++L  AL NI LP+VE   + 
Sbjct:   453 ASFSYKAKYYALICYGPGLPISTLHDGRTDQEIQVLEENKELENALRNIQLPAVEIKKLE 512

Query:   477 IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVV 536
                 M    K+ LPP  D S  KKYPLLI VYGGP S  V   FSV+W  YLA  + IVV
Sbjct:   513 -DGGMTFWYKMILPPQFDRS--KKYPLLIQVYGGPCSQSVKSVFSVNWITYLASKEGIVV 569

Query:   537 AYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGY 596
             A +DGR +A +G+   +A YR+LG  E+ DQ+   R   E + +ID+ R AIWGWSYGGY
Sbjct:   570 ALVDGRGTAFQGDKFLHAVYRKLGVYEVEDQLTAVRKFIE-MGFIDEGRIAIWGWSYGGY 628

Query:   597 ATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVD 656
              + LALA   + +FKCGI+VAPV+ W YY +IY+ER+MGLPT +DNLE YK + +  + +
Sbjct:   629 VSSLALA-SGTGLFKCGIAVAPVSSWEYYASIYTERFMGLPTKDDNLEHYKNSTVMARAE 687

Query:   657 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
               R+  YLL+HGT DDNVHFQ S  +AK+L +A + FQ+  Y
Sbjct:   688 YFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 729

GO:0002020 "protease binding" evidence=ISO

GO:0004175 "endopeptidase activity" evidence=ISO

GO:0005615 "extracellular space" evidence=ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0008233 "peptidase activity" evidence=ISO

GO:0008236 "serine-type peptidase activity" evidence=ISO

GO:0010716 "negative regulation of extracellular matrix disassembly" evidence=ISO

GO:0030027 "lamellipodium" evidence=ISO

GO:0043542 "endothelial cell migration" evidence=ISO

UNIPROTKB|F1LMH7 Fap "Protein Fap" [Rattus norvegicus (taxid:10116)]

 Score = 761 (272.9 bits), Expect = 6.6e-85, Sum P(3) = 6.6e-85
 Identities = 185/462 (40%), Positives = 261/462 (56%)

Query:   252 VNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPF--DHLRFSSDG 308
             + W  NE V   W+ RVQN   ++  SI    CD  F  D    W  P   +H+  S  G
Sbjct:   296 LTWVTNERVCLQWLKRVQN---VSVLSI----CD--FREDW-HAWDCPKNQEHIEESRTG 345

Query:   309 KKMLLILSHNQESDGSTPVDSWDHLTFIDL-DDQAG------IKDKVP--VPLTRGRFTV 359
                   +S        TP  S D  ++  +  D+ G      IKD V   + +T G++  
Sbjct:   346 WAGGFFVS--------TPAFSQDAASYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEA 397

Query:   360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
               I  +   ++++++ S +  G P  +++YRI+I +   + +C+TC L     ++C Y  
Sbjct:   398 --IYIFRVTQDSLFYSSNEFEGYPGRRNIYRISIGNSPPSKKCVTCHL---RKERCQYYT 452

Query:   418 ATFSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMSVP 476
             A+FS    YY L C GPG+P   L D +T Q +   + N++L  AL NI LP+VE   + 
Sbjct:   453 ASFSYKAKYYALICYGPGLPISTLHDGRTDQEIQVLEENKELENALRNIQLPAVEIKKLE 512

Query:   477 IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVV 536
                 M    K+ LPP  D S  KKYPLLI VYGGP S  V   FSV+W  YLA  + IVV
Sbjct:   513 -DGGMTFWYKMILPPQFDRS--KKYPLLIQVYGGPCSQSVKSVFSVNWITYLASKEGIVV 569

Query:   537 AYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGY 596
             A +DGR +A +G+   +A YR+LG  E+ DQ+   R   E + +ID+ R AIWGWSYGGY
Sbjct:   570 ALVDGRGTAFQGDKFLHAVYRKLGVYEVEDQLTAVRKFIE-MGFIDEGRIAIWGWSYGGY 628

Query:   597 ATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVD 656
              + LALA   + +FKCGI+VAPV+ W YY +IY+ER+MGLPT +DNLE YK + +  + +
Sbjct:   629 VSSLALA-SGTGLFKCGIAVAPVSSWEYYASIYTERFMGLPTKDDNLEHYKNSTVMARAE 687

Query:   657 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
               R+  YLL+HGT DDNVHFQ S  +AK+L +A + FQ+  Y
Sbjct:   688 YFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 729

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1M8Q0 Fap "Protein Fap" [Rattus norvegicus (taxid:10116)]

 Score = 761 (272.9 bits), Expect = 6.6e-85, Sum P(3) = 6.6e-85
 Identities = 185/462 (40%), Positives = 261/462 (56%)

Query:   252 VNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPF--DHLRFSSDG 308
             + W  NE V   W+ RVQN   ++  SI    CD  F  D    W  P   +H+  S  G
Sbjct:   263 LTWVTNERVCLQWLKRVQN---VSVLSI----CD--FREDW-HAWDCPKNQEHIEESRTG 312

Query:   309 KKMLLILSHNQESDGSTPVDSWDHLTFIDL-DDQAG------IKDKVP--VPLTRGRFTV 359
                   +S        TP  S D  ++  +  D+ G      IKD V   + +T G++  
Sbjct:   313 WAGGFFVS--------TPAFSQDAASYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEA 364

Query:   360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
               I  +   ++++++ S +  G P  +++YRI+I +   + +C+TC L     ++C Y  
Sbjct:   365 --IYIFRVTQDSLFYSSNEFEGYPGRRNIYRISIGNSPPSKKCVTCHL---RKERCQYYT 419

Query:   418 ATFSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMSVP 476
             A+FS    YY L C GPG+P   L D +T Q +   + N++L  AL NI LP+VE   + 
Sbjct:   420 ASFSYKAKYYALICYGPGLPISTLHDGRTDQEIQVLEENKELENALRNIQLPAVEIKKLE 479

Query:   477 IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVV 536
                 M    K+ LPP  D S  KKYPLLI VYGGP S  V   FSV+W  YLA  + IVV
Sbjct:   480 -DGGMTFWYKMILPPQFDRS--KKYPLLIQVYGGPCSQSVKSVFSVNWITYLASKEGIVV 536

Query:   537 AYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGY 596
             A +DGR +A +G+   +A YR+LG  E+ DQ+   R   E + +ID+ R AIWGWSYGGY
Sbjct:   537 ALVDGRGTAFQGDKFLHAVYRKLGVYEVEDQLTAVRKFIE-MGFIDEGRIAIWGWSYGGY 595

Query:   597 ATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVD 656
              + LALA   + +FKCGI+VAPV+ W YY +IY+ER+MGLPT +DNLE YK + +  + +
Sbjct:   596 VSSLALA-SGTGLFKCGIAVAPVSSWEYYASIYTERFMGLPTKDDNLEHYKNSTVMARAE 654

Query:   657 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
               R+  YLL+HGT DDNVHFQ S  +AK+L +A + FQ+  Y
Sbjct:   655 YFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 696

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

FB|FBgn0031835 CG11319 [Drosophila melanogaster (taxid:7227)]

 Score = 631 (227.2 bits), Expect = 9.2e-85, Sum P(4) = 9.2e-85
 Identities = 121/264 (45%), Positives = 170/264 (64%)

Query:   449 LLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVY 508
             L+    N  L+  +    +P ++   V I     AQV+L+LPP +      +YP ++HVY
Sbjct:   640 LVIVQNNTRLKEKMAKTAMPQIKTFPVMISGGYHAQVRLYLPPVLREDEITRYPTILHVY 699

Query:   509 GGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQI 568
              GP S  VT+ + VDWN YL+ +KD +V  IDGR SA +G  L +  Y+RLG+VE+ DQ+
Sbjct:   700 SGPGSQLVTDHWHVDWNTYLSGSKDYIVVEIDGRGSAGQGYQLLHEVYKRLGSVEVSDQL 759

Query:   569 NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI 628
              V+ YL++NL +ID  R  +WGWSYGGY   LALA   S +F+CGISV+PVT+W  YD+ 
Sbjct:   760 EVSEYLRDNLHFIDSRRMGVWGWSYGGYTAALALAGQQS-IFQCGISVSPVTNWKLYDST 818

Query:   629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQH 688
             Y+ERY+  P   DN +GY+ + L+  VD +RD+Q+LLVHGT DDNVH QQSM+LA+SL  
Sbjct:   819 YAERYLSFPNVTDNYKGYEESDLSKYVDNLRDRQFLLVHGTADDNVHVQQSMVLARSLTS 878

Query:   689 ADIMFQSQRYMGLPTFEDNLEGYK 712
               ++++ Q Y   P    +L G K
Sbjct:   879 KGVLYKQQIY---PDEGHSLSGVK 899

GO:0008239 "dipeptidyl-peptidase activity" evidence=ISS

GO:0006508 "proteolysis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008236 "serine-type peptidase activity" evidence=IEA

UNIPROTKB|B4DLR2 FAP "cDNA FLJ60298, highly similar to Seprase (EC 3.4.21.-)" [Homo sapiens (taxid:9606)]

 Score = 757 (271.5 bits), Expect = 3.6e-84, Sum P(3) = 3.6e-84
 Identities = 183/464 (39%), Positives = 262/464 (56%)

Query:   250 SRVNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPF--DHLRFSS 306
             S + W  +E V   W+ RVQN   ++  SI    CD  F  D    W  P   +H+  S 
Sbjct:   269 SWLTWVTDERVCLQWLKRVQN---VSVLSI----CD--FREDWQT-WDCPKTQEHIEESR 318

Query:   307 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDL-DDQAG------IKDKVP--VPLTRGRF 357
              G      +S        TPV S+D +++  +  D+ G      IKD V   + +T G++
Sbjct:   319 TGWAGGFFVS--------TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKW 370

Query:   358 TVTEILAWDEKENNVYFLSTQGS--PIVQHMYRINIADPTATPECITCDLLTSANQKCSY 415
                 I      ++++++ S +    P  +++YRI+I     + +C+TC L     ++C Y
Sbjct:   371 EAINIFR--VTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHL---RKERCQY 425

Query:   416 SGATFSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
               A+FS    YY L C GPGIP   L D +T Q +   + N++L  AL NI LP  E   
Sbjct:   426 YTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKK 485

Query:   475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             + +   +    K+ LPP  D S  KKYPLLI VYGGP S  V   F+V+W  YLA  + +
Sbjct:   486 LEVD-EITLWYKMILPPQFDRS--KKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGM 542

Query:   535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
             V+A +DGR +A +G+ L YA YR+LG  E+ DQI   R   E + +ID+ R AIWGWSYG
Sbjct:   543 VIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIE-MGFIDEKRIAIWGWSYG 601

Query:   595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
             GY + LALA   + +FKCGI+VAPV+ W YY ++Y+ER+MGLPT +DNLE YK + +  +
Sbjct:   602 GYVSSLALA-SGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMAR 660

Query:   655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
              +  R+  YLL+HGT DDNVHFQ S  +AK+L +A + FQ+  Y
Sbjct:   661 AEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 704

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q12884 FAP "Seprase" [Homo sapiens (taxid:9606)]

 Score = 757 (271.5 bits), Expect = 3.6e-84, Sum P(3) = 3.6e-84
 Identities = 183/464 (39%), Positives = 262/464 (56%)

Query:   250 SRVNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPF--DHLRFSS 306
             S + W  +E V   W+ RVQN   ++  SI    CD  F  D    W  P   +H+  S 
Sbjct:   294 SWLTWVTDERVCLQWLKRVQN---VSVLSI----CD--FREDWQT-WDCPKTQEHIEESR 343

Query:   307 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDL-DDQAG------IKDKVP--VPLTRGRF 357
              G      +S        TPV S+D +++  +  D+ G      IKD V   + +T G++
Sbjct:   344 TGWAGGFFVS--------TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKW 395

Query:   358 TVTEILAWDEKENNVYFLSTQGS--PIVQHMYRINIADPTATPECITCDLLTSANQKCSY 415
                 I      ++++++ S +    P  +++YRI+I     + +C+TC L     ++C Y
Sbjct:   396 EAINIFR--VTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHL---RKERCQY 450

Query:   416 SGATFSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
               A+FS    YY L C GPGIP   L D +T Q +   + N++L  AL NI LP  E   
Sbjct:   451 YTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKK 510

Query:   475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             + +   +    K+ LPP  D S  KKYPLLI VYGGP S  V   F+V+W  YLA  + +
Sbjct:   511 LEVD-EITLWYKMILPPQFDRS--KKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGM 567

Query:   535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
             V+A +DGR +A +G+ L YA YR+LG  E+ DQI   R   E + +ID+ R AIWGWSYG
Sbjct:   568 VIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIE-MGFIDEKRIAIWGWSYG 626

Query:   595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
             GY + LALA   + +FKCGI+VAPV+ W YY ++Y+ER+MGLPT +DNLE YK + +  +
Sbjct:   627 GYVSSLALA-SGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMAR 685

Query:   655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
              +  R+  YLL+HGT DDNVHFQ S  +AK+L +A + FQ+  Y
Sbjct:   686 AEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 729

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0031258 "lamellipodium membrane" evidence=IEA

GO:0071438 "invadopodium membrane" evidence=IEA

GO:0030027 "lamellipodium" evidence=IDA

GO:0016021 "integral to membrane" evidence=NAS

GO:0004222 "metalloendopeptidase activity" evidence=TAS

GO:0046983 "protein dimerization activity" evidence=NAS

GO:0008236 "serine-type peptidase activity" evidence=IMP;IDA;NAS

GO:0008239 "dipeptidyl-peptidase activity" evidence=NAS

GO:0042803 "protein homodimerization activity" evidence=NAS

GO:0010716 "negative regulation of extracellular matrix disassembly" evidence=IDA

GO:0043542 "endothelial cell migration" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0008233 "peptidase activity" evidence=IDA

GO:0002020 "protease binding" evidence=IPI

GO:0005615 "extracellular space" evidence=IDA

GO:0004175 "endopeptidase activity" evidence=IDA

GO:0051917 "regulation of fibrinolysis" evidence=IC

UNIPROTKB|A5D7B7 FAP "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 755 (270.8 bits), Expect = 7.4e-84, Sum P(3) = 7.4e-84
 Identities = 180/464 (38%), Positives = 262/464 (56%)

Query:   250 SRVNWANES-VVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPF--DHLRFSS 306
             S + W  +  +   W+ R+QN + ++       TCD  F  D    W  P   +H+  S 
Sbjct:   294 SWLTWVTDDRICLQWLKRIQNVSVLS-------TCD--FREDWQT-WNCPKTQEHIEESR 343

Query:   307 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDL-DDQAG------IKDKVP--VPLTRGRF 357
              G      +S        TPV S D +++  +  D+ G      I+D V   + +T G++
Sbjct:   344 TGWAGGFFVS--------TPVFSHDTISYYKIFSDKDGYKHIHYIRDTVENAIQITSGKW 395

Query:   358 TVTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSY 415
                 I      ++++++ S +  G P  +++YRI+I   + + +CITC L     ++C Y
Sbjct:   396 EAINIFR--VTQDSLFYSSNEFEGYPGRRNIYRISIGSHSPSKKCITCHL---RKKRCQY 450

Query:   416 SGATFSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
               A+FS    YY L C GPG+P   L D +T Q +   + N++L  AL NI LP  E   
Sbjct:   451 YTASFSDYAKYYALVCYGPGLPISTLHDGRTDQEIKILEDNKELENALKNIQLPKEEIKK 510

Query:   475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             + +  ++    K+ LPP  D S  KKYPLLI VYGGP S  V   F+V W  YLA  + I
Sbjct:   511 LKVD-DITLWYKMILPPQFDKS--KKYPLLIQVYGGPCSQSVRSIFAVSWISYLASKEGI 567

Query:   535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
             V+A +DGR +A +G+ L YA YR+LG  E+ DQI   R   E + +ID+ R AIWGWSYG
Sbjct:   568 VIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIE-MGFIDEKRIAIWGWSYG 626

Query:   595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
             GY + LALA   + +FKCGI+VAPV+ W YY +IY+ER+MGLPT +DNL+ YK + +  +
Sbjct:   627 GYVSSLALA-SGTGLFKCGIAVAPVSSWEYYASIYTERFMGLPTKDDNLKHYKNSTVMAR 685

Query:   655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
              +  R+  YLL+HGT DDNVHFQ S  +AK+L +A + FQ+  Y
Sbjct:   686 AEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 729

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0010716 "negative regulation of extracellular matrix disassembly" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0002020 "protease binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

MGI|MGI:109608 Fap "fibroblast activation protein" [Mus musculus (taxid:10090)]

 Score = 752 (269.8 bits), Expect = 1.5e-83, Sum P(3) = 1.5e-83
 Identities = 182/460 (39%), Positives = 261/460 (56%)

Query:   250 SRVNW-ANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPF--DHLRFSS 306
             S + W ++E V   W+ RVQN   ++  SI    CD  F  D    W  P   +H+  S 
Sbjct:   294 SWLTWVSSERVCLQWLKRVQN---VSVLSI----CD--FREDW-HAWECPKNQEHVEESR 343

Query:   307 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI---KDKVP--VPLTRGRFTVTE 361
              G      +S    S  +T   S+ +  F D D    I   KD V   + +T G++    
Sbjct:   344 TGWAGGFFVSTPAFSQDAT---SY-YKIFSDKDGYKHIHYIKDTVENAIQITSGKWEA-- 397

Query:   362 ILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGAT 419
             I  +   ++++++ S +  G P  +++YRI+I +   + +C+TC L     ++C Y  A+
Sbjct:   398 IYIFRVTQDSLFYSSNEFEGYPGRRNIYRISIGNSPPSKKCVTCHL---RKERCQYYTAS 454

Query:   420 FSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQ 478
             FS    YY L C GPG+P   L D +T Q +   + N++L  +L NI LP VE   +   
Sbjct:   455 FSYKAKYYALVCYGPGLPISTLHDGRTDQEIQVLEENKELENSLRNIQLPKVEIKKLK-D 513

Query:   479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAY 538
               +    K+ LPP  D S  KKYPLLI VYGGP S  V   F+V+W  YLA  + IV+A 
Sbjct:   514 GGLTFWYKMILPPQFDRS--KKYPLLIQVYGGPCSQSVKSVFAVNWITYLASKEGIVIAL 571

Query:   539 IDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYAT 598
             +DGR +A +G+   +A YR+LG  E+ DQ+   R   E + +ID+ R AIWGWSYGGY +
Sbjct:   572 VDGRGTAFQGDKFLHAVYRKLGVYEVEDQLTAVRKFIE-MGFIDEERIAIWGWSYGGYVS 630

Query:   599 GLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRI 658
              LALA   + +FKCGI+VAPV+ W YY +IYSER+MGLPT +DNLE YK + +  + +  
Sbjct:   631 SLALA-SGTGLFKCGIAVAPVSSWEYYASIYSERFMGLPTKDDNLEHYKNSTVMARAEYF 689

Query:   659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
             R+  YLL+HGT DDNVHFQ S  +AK+L +A + FQ+  Y
Sbjct:   690 RNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 729

GO:0002020 "protease binding" evidence=ISO

GO:0004175 "endopeptidase activity" evidence=ISO

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005615 "extracellular space" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008152 "metabolic process" evidence=ISO;IDA

GO:0008233 "peptidase activity" evidence=ISO;IDA

GO:0008236 "serine-type peptidase activity" evidence=ISO

GO:0010716 "negative regulation of extracellular matrix disassembly" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0030027 "lamellipodium" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q12884	SEPR_HUMAN	3, ., 4, ., 2, 1, ., -	0.3311	0.6936	0.7210	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	790
pfam00326	212	pfam00326, Peptidase_S9, Prolyl oligopeptidase fam	6e-54
COG1506	620	COG1506, DAP2, Dipeptidyl aminopeptidases/acylamin	3e-41
pfam00930	348	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP I	2e-34
pfam00930	348	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP I	7e-28
pfam00326	212	pfam00326, Peptidase_S9, Prolyl oligopeptidase fam	1e-17

>gnl|CDD|215859 pfam00326, Peptidase_S9, Prolyl oligopeptidase family

 Score =  185 bits (471), Expect = 6e-54
 Identities = 70/217 (32%), Positives = 97/217 (44%), Gaps = 14/217 (6%)

Query: 520 FSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP 579
            S  WNL L  ++  VVA  +GR S   G     AG   LG  E  D I    YL     
Sbjct: 1   PSFSWNLQLLADRGYVVAVANGRGSGGYGRAWHDAGKGDLGQNEFDDFIAAAEYLIAQ-G 59

Query: 580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI---YSERYMGL 636
           Y+D  R AIWG SYGGY TG AL   P ++FK  ++V PV DW+ Y +    ++ERYM  
Sbjct: 60  YVDPDRLAIWGGSYGGYLTGAALNQRP-DLFKAAVAVVPVVDWLTYMSDTSPFTERYMEW 118

Query: 637 PTFEDNLEGYK-IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQS 695
               DN EGY+ ++  +   +       LL+HG  DD V   +++ L  +LQ        
Sbjct: 119 GNPWDNEEGYRYLSPYSPYDNVKAYPPLLLIHGLHDDRVPPAEALKLVAALQAKGKNVLL 178

Query: 696 QRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH 732
             +          EG+      NK +    +   L+ 
Sbjct: 179 LIFPD--------EGHGGGKPRNKREEYARELAFLLK 207

Length = 212

>gnl|CDD|224423 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]

 Score =  160 bits (406), Expect = 3e-41
 Identities = 97/434 (22%), Positives = 156/434 (35%), Gaps = 58/434 (13%)

Query: 302 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTF-----IDLDDQAGIKDKVPVPLTRGR 356
           L F +DGK  + +L    ESD       +  L       +D D  +G   +    +  G 
Sbjct: 221 LAFDADGK-SIALLGT--ESDRGLAEGDFILLLDGELGEVDGDLSSGDDTRGAWAVEGGL 277

Query: 357 FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYS 416
                        + + F++T G           + D              S +      
Sbjct: 278 -----------DGDGLLFIATDGG---GSSPLFRVDDLG------GGVEGLSGD-DGGVP 316

Query: 417 GATFSTNVSYYVLSCIGPGIP-EIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSV 475
           G            S   P  P EI L+D+  +            + L  + L   E ++ 
Sbjct: 317 GFDVDGRKLALAYS--SPTEPPEIYLYDRGEEA----KLTSSNNSGLKKVKLAEPEPVTY 370

Query: 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV 535
                      L+ PPG D    KKYPL+++++GGPS+      +S +  + +  +    
Sbjct: 371 KSNDGETIHGWLYKPPGFDPR--KKYPLIVYIHGGPSAQ---VGYSFNPEIQVLASAGYA 425

Query: 536 VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595
           V   + R S   G     A     G V++ D I     L + LP +D  R  I G SYGG
Sbjct: 426 VLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVK-LPLVDPERIGITGGSYGG 484

Query: 596 YATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP-----TFEDNLEGYKIAA 650
           Y T LA    P   FK  ++VA   DW+ Y    +E     P        ++ E Y+  +
Sbjct: 485 YMTLLAATKTP--RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRS 542

Query: 651 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG 710
                D I+    LL+HG  DD V  +Q+  L  +L+      +   +          EG
Sbjct: 543 PIFYADNIKTPL-LLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPD--------EG 593

Query: 711 YKIAALNNKVDRIR 724
           +  +   N+V  ++
Sbjct: 594 HGFSRPENRVKVLK 607

Length = 620

>gnl|CDD|216201 pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region

 Score =  134 bits (339), Expect = 2e-34
 Identities = 61/208 (29%), Positives = 92/208 (44%), Gaps = 28/208 (13%)

Query: 231 TVTEILAWDEKENNVEPVLSRVNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSR 289
              E++  D+  +  +  ++RV W  +E ++  W+NR QN   +       G   V+   
Sbjct: 167 KTVELVPPDDLSDA-DYYITRVKWTPDEKLLVQWLNRDQNVLDLVLVDTETGRTVVLL-E 224

Query: 290 DLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP 349
           +   GW E      F  DG   L I             D + HL   DLD       K+P
Sbjct: 225 ETSDGWVELHQDPVFLRDGSGFLWISER----------DGYKHLYLYDLDG------KLP 268

Query: 350 VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSA 409
             LT G + VT IL  DEK + VYF +T+ SP  +H+YR+++      P+ +T +     
Sbjct: 269 RQLTSGNWEVTSILGVDEKRDLVYFTATEDSPGERHLYRVSLD--GGEPQRLTDESGDHR 326

Query: 410 NQKCSYSGATFSTNVSYYVLSCIGPGIP 437
           +       A+FS N  YYVL+  GP  P
Sbjct: 327 S-------ASFSPNGKYYVLTYSGPDTP 347

This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry. Length = 348

>gnl|CDD|216201 pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region

 Score =  115 bits (290), Expect = 7e-28
 Identities = 58/210 (27%), Positives = 85/210 (40%), Gaps = 48/210 (22%)

Query: 4   EEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQ---YTQA------- 53
           EEV  S+SA W+SP G+ LA+  FD++   I+T+P Y + G    +   Y +A       
Sbjct: 97  EEVFGSNSAYWWSPDGSRLAFLRFDESEVPIITLPDYTDDGPAEVRSIKYPKAGAPNPTV 156

Query: 54  ----INL----------------REPVLSRVNWA-NESVVAAWVNRVQNRARITRCSINE 92
                +L                 +  ++RV W  +E ++  W+NR QN   +       
Sbjct: 157 KLFVYDLASGKTVELVPPDDLSDADYYITRVKWTPDEKLLVQWLNRDQNVLDLVLVDTET 216

Query: 93  GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD 152
           G   V+   +   GW E      F  DG   L I             D + HL   DLD 
Sbjct: 217 GRTVVLL-EETSDGWVELHQDPVFLRDGSGFLWISER----------DGYKHLYLYDLD- 264

Query: 153 QAGIKDKVPVPLTRGRFTVTEILAWDEREN 182
                 K+P  LT G + VT IL  DE+ +
Sbjct: 265 -----GKLPRQLTSGNWEVTSILGVDEKRD 289

This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry. Length = 348

>gnl|CDD|215859 pfam00326, Peptidase_S9, Prolyl oligopeptidase family

 Score = 82.3 bits (204), Expect = 1e-17
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 3/96 (3%)

Query: 697 RYMGLPTFEDNLEGYK-IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD 755
           RYM      DN EGY+ ++  +   +       LL+HG  DD V   +++ L  +LQ   
Sbjct: 114 RYMEWGNPWDNEEGYRYLSPYSPYDNVKAYPPLLLIHGLHDDRVPPAEALKLVAALQAKG 173

Query: 756 IMFQSQTYPDEEHGLI--GVRPHFYHTLERFLDSCF 789
                  +PDE HG      +   Y     FL    
Sbjct: 174 KNVLLLIFPDEGHGGGKPRNKREEYARELAFLLKVL 209

Length = 212

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	790
KOG2100|consensus	755		100.0
KOG2281|consensus	867		100.0
COG1506	620	DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept	100.0
PRK10115	686	protease 2; Provisional	100.0
PF00326	213	Peptidase_S9: Prolyl oligopeptidase family This fa	99.95
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	99.95
PRK01029	428	tolB translocation protein TolB; Provisional	99.89
PRK01029	428	tolB translocation protein TolB; Provisional	99.88
PRK04043	419	tolB translocation protein TolB; Provisional	99.88
PRK04043	419	tolB translocation protein TolB; Provisional	99.88
COG1770	682	PtrB Protease II [Amino acid transport and metabol	99.87
PRK05137	435	tolB translocation protein TolB; Provisional	99.87
PRK03629	429	tolB translocation protein TolB; Provisional	99.87
PRK02889	427	tolB translocation protein TolB; Provisional	99.86
KOG1455|consensus	313		99.86
PRK05137	435	tolB translocation protein TolB; Provisional	99.86
PRK04792	448	tolB translocation protein TolB; Provisional	99.85
PRK03629	429	tolB translocation protein TolB; Provisional	99.85
PRK04922	433	tolB translocation protein TolB; Provisional	99.85
COG1505	648	Serine proteases of the peptidase family S9A [Amin	99.85
PRK13604	307	luxD acyl transferase; Provisional	99.84
PRK00178	430	tolB translocation protein TolB; Provisional	99.84
PRK04922	433	tolB translocation protein TolB; Provisional	99.84
PRK00178	430	tolB translocation protein TolB; Provisional	99.84
PRK04792	448	tolB translocation protein TolB; Provisional	99.83
PLN02298	330	hydrolase, alpha/beta fold family protein	99.83
PRK02889	427	tolB translocation protein TolB; Provisional	99.82
PRK10566	249	esterase; Provisional	99.81
PLN02385	349	hydrolase; alpha/beta fold family protein	99.81
PLN02442	283	S-formylglutathione hydrolase	99.8
PRK01742	429	tolB translocation protein TolB; Provisional	99.79
PRK05077	414	frsA fermentation/respiration switch protein; Revi	99.79
TIGR02821	275	fghA_ester_D S-formylglutathione hydrolase. This m	99.79
KOG2237|consensus	712		99.78
COG4946	668	Uncharacterized protein related to the periplasmic	99.77
PRK01742	429	tolB translocation protein TolB; Provisional	99.76
PHA02857	276	monoglyceride lipase; Provisional	99.76
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	99.76
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.75
COG1647	243	Esterase/lipase [General function prediction only]	99.75
PRK10162	318	acetyl esterase; Provisional	99.74
PRK10749	330	lysophospholipase L2; Provisional	99.74
PLN02652	395	hydrolase; alpha/beta fold family protein	99.74
PF01738	218	DLH: Dienelactone hydrolase family; InterPro: IPR0	99.74
PF05448	320	AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0	99.74
KOG1552|consensus	258		99.72
COG2267	298	PldB Lysophospholipase [Lipid metabolism]	99.71
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	99.7
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.7
COG0412	236	Dienelactone hydrolase and related enzymes [Second	99.68
COG3458	321	Acetyl esterase (deacetylase) [Secondary metabolit	99.68
PLN02511	388	hydrolase	99.67
PRK05371	767	x-prolyl-dipeptidyl aminopeptidase; Provisional	99.66
PRK10985	324	putative hydrolase; Provisional	99.66
TIGR03343	282	biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die	99.65
TIGR03611	257	RutD pyrimidine utilization protein D. This protei	99.65
KOG4391|consensus	300		99.64
PRK00870	302	haloalkane dehalogenase; Provisional	99.63
TIGR01840	212	esterase_phb esterase, PHB depolymerase family. Th	99.62
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	99.62
TIGR01607	332	PST-A Plasmodium subtelomeric family (PST-A). Thes	99.62
TIGR02240	276	PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer	99.62
PRK11460	232	putative hydrolase; Provisional	99.61
PLN02824	294	hydrolase, alpha/beta fold family protein	99.61
KOG4178|consensus	322		99.6
TIGR03056	278	bchO_mg_che_rel putative magnesium chelatase acces	99.6
PLN03087	481	BODYGUARD 1 domain containing hydrolase; Provision	99.6
PLN02965	255	Probable pheophorbidase	99.58
TIGR00976	550	/NonD putative hydrolase, CocE/NonD family. This m	99.58
PRK06489	360	hypothetical protein; Provisional	99.57
COG0657	312	Aes Esterase/lipase [Lipid metabolism]	99.57
KOG1515|consensus	336		99.57
COG2945	210	Predicted hydrolase of the alpha/beta superfamily	99.57
TIGR02427	251	protocat_pcaD 3-oxoadipate enol-lactonase. Members	99.57
PF02129	272	Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam	99.56
PRK10349	256	carboxylesterase BioH; Provisional	99.56
PRK03592	295	haloalkane dehalogenase; Provisional	99.56
PF12695	145	Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3	99.56
TIGR01738	245	bioH putative pimeloyl-BioC--CoA transferase BioH.	99.56
COG0429	345	Predicted hydrolase of the alpha/beta-hydrolase fo	99.55
PF02230	216	Abhydrolase_2: Phospholipase/Carboxylesterase; Int	99.54
PLN02679	360	hydrolase, alpha/beta fold family protein	99.54
TIGR01249	306	pro_imino_pep_1 proline iminopeptidase, Neisseria-	99.53
PRK10673	255	acyl-CoA esterase; Provisional	99.53
PRK11071	190	esterase YqiA; Provisional	99.53
TIGR03100	274	hydr1_PEP hydrolase, ortholog 1, exosortase system	99.53
TIGR01250	288	pro_imino_pep_2 proline-specific peptidases, Bacil	99.53
PLN02872	395	triacylglycerol lipase	99.52
PF10503	220	Esterase_phd: Esterase PHB depolymerase	99.52
PRK07581	339	hypothetical protein; Validated	99.52
PF06500	411	DUF1100: Alpha/beta hydrolase of unknown function	99.52
PF07859	211	Abhydrolase_3: alpha/beta hydrolase fold A web pag	99.51
TIGR03695	251	menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene	99.5
KOG4409|consensus	365		99.5
TIGR01392	351	homoserO_Ac_trn homoserine O-acetyltransferase. Th	99.5
PRK14875	371	acetoin dehydrogenase E2 subunit dihydrolipoyllysi	99.5
PRK03204	286	haloalkane dehalogenase; Provisional	99.5
PRK00175	379	metX homoserine O-acetyltransferase; Provisional	99.49
PRK11126	242	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl	99.48
PLN02894	402	hydrolase, alpha/beta fold family protein	99.48
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	99.48
PLN02578	354	hydrolase	99.48
KOG4667|consensus	269		99.46
PF12715	390	Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8	99.46
COG4099	387	Predicted peptidase [General function prediction o	99.45
PF12697	228	Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3	99.45
COG0400	207	Predicted esterase [General function prediction on	99.44
PLN02211	273	methyl indole-3-acetate methyltransferase	99.44
COG4946	668	Uncharacterized protein related to the periplasmic	99.44
PLN00021	313	chlorophyllase	99.42
PLN03084	383	alpha/beta hydrolase fold protein; Provisional	99.42
KOG1838|consensus	409		99.41
KOG1454|consensus	326		99.4
PRK08775	343	homoserine O-acetyltransferase; Provisional	99.4
TIGR01836	350	PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth	99.4
TIGR03101	266	hydr2_PEP hydrolase, ortholog 2, exosortase system	99.37
PRK10115	686	protease 2; Provisional	99.35
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	99.32
PF08840	213	BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term	99.3
PLN02980	1655	2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi	99.29
PRK06765	389	homoserine O-acetyltransferase; Provisional	99.28
COG3509	312	LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda	99.25
KOG2984|consensus	277		99.22
KOG3043|consensus	242		99.21
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.21
PRK05855	582	short chain dehydrogenase; Validated	99.19
TIGR01838	532	PHA_synth_I poly(R)-hydroxyalkanoic acid synthase,	99.18
PRK10439	411	enterobactin/ferric enterobactin esterase; Provisi	99.13
COG2936	563	Predicted acyl esterases [General function predict	99.13
KOG2564|consensus	343		99.12
PF00561	230	Abhydrolase_1: alpha/beta hydrolase fold A web pag	99.11
PF03583	290	LIP: Secretory lipase ; InterPro: IPR005152 This e	99.09
KOG4627|consensus	270		99.06
KOG2382|consensus	315		99.06
PRK07868	994	acyl-CoA synthetase; Validated	99.03
KOG0271|consensus	480		99.03
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.99
PF12740	259	Chlorophyllase2: Chlorophyllase enzyme; InterPro:	98.99
PF08538	303	DUF1749: Protein of unknown function (DUF1749); In	98.96
KOG1407|consensus	313		98.92
PF00756	251	Esterase: Putative esterase; InterPro: IPR000801 T	98.92
KOG2624|consensus	403		98.91
KOG0318|consensus	603		98.9
PF03403	379	PAF-AH_p_II: Platelet-activating factor acetylhydr	98.88
PF05728	187	UPF0227: Uncharacterised protein family (UPF0227);	98.88
COG4757	281	Predicted alpha/beta hydrolase [General function p	98.88
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	98.87
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	98.86
KOG3101|consensus	283		98.85
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.84
PF06342	297	DUF1057: Alpha/beta hydrolase of unknown function	98.83
KOG2096|consensus	420		98.81
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	98.78
KOG0293|consensus	519		98.78
KOG0271|consensus	480		98.77
KOG0318|consensus	603		98.76
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.76
KOG0315|consensus	311		98.75
PF06821	171	Ser_hydrolase: Serine hydrolase; InterPro: IPR0106	98.73
PRK13616	591	lipoprotein LpqB; Provisional	98.73
COG4188	365	Predicted dienelactone hydrolase [General function	98.72
COG0596	282	MhpC Predicted hydrolases or acyltransferases (alp	98.71
TIGR01839	560	PHA_synth_II poly(R)-hydroxyalkanoic acid synthase	98.71
KOG2112|consensus	206		98.69
COG2021	368	MET2 Homoserine acetyltransferase [Amino acid tran	98.69
PRK13616	591	lipoprotein LpqB; Provisional	98.68
KOG0291|consensus	893		98.67
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.67
PF02273	294	Acyl_transf_2: Acyl transferase; InterPro: IPR0031	98.66
KOG0293|consensus	519		98.65
KOG0291|consensus	893		98.63
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	98.63
cd00312	493	Esterase_lipase Esterases and lipases (includes fu	98.62
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.62
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.62
COG3208	244	GrsT Predicted thioesterase involved in non-riboso	98.62
KOG0315|consensus	311		98.61
KOG2314|consensus	698		98.6
cd00707	275	Pancreat_lipase_like Pancreatic lipase-like enzyme	98.6
KOG0286|consensus	343		98.6
KOG1446|consensus	311		98.6
COG2382	299	Fes Enterochelin esterase and related enzymes [Ino	98.59
COG3571	213	Predicted hydrolase of the alpha/beta-hydrolase fo	98.59
KOG0973|consensus	942		98.57
PF09752	348	DUF2048: Uncharacterized conserved protein (DUF204	98.56
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.56
PRK11028	330	6-phosphogluconolactonase; Provisional	98.55
PRK11028	330	6-phosphogluconolactonase; Provisional	98.55
KOG0273|consensus	524		98.54
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	98.54
KOG0272|consensus	459		98.54
KOG2055|consensus	514		98.53
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.52
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.52
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.51
KOG1407|consensus	313		98.5
KOG0279|consensus	315		98.5
PF07224	307	Chlorophyllase: Chlorophyllase; InterPro: IPR01082	98.49
KOG2055|consensus	514		98.49
COG0627	316	Predicted esterase [General function prediction on	98.49
KOG2315|consensus	566		98.48
COG2272	491	PnbA Carboxylesterase type B [Lipid metabolism]	98.46
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.45
KOG2281|consensus	867		98.45
KOG2551|consensus	230		98.44
TIGR03230	442	lipo_lipase lipoprotein lipase. Members of this pr	98.44
PF00135	535	COesterase: Carboxylesterase family The prints ent	98.43
KOG0279|consensus	315		98.41
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.41
PF11144	403	DUF2920: Protein of unknown function (DUF2920); In	98.39
KOG3847|consensus	399		98.36
PF03959	212	FSH1: Serine hydrolase (FSH1); InterPro: IPR005645	98.32
COG2819	264	Predicted hydrolase of the alpha/beta superfamily	98.32
COG1506	620	DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept	98.32
KOG0266|consensus	456		98.3
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.25
PF10340	374	DUF2424: Protein of unknown function (DUF2424); In	98.25
PTZ00472	462	serine carboxypeptidase (CBP1); Provisional	98.24
KOG4497|consensus	447		98.23
KOG1446|consensus	311		98.23
PTZ00421	493	coronin; Provisional	98.21
TIGR01849	406	PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase,	98.17
KOG0266|consensus	456		98.17
KOG0973|consensus	942		98.17
PRK04940	180	hypothetical protein; Provisional	98.1
PTZ00420	568	coronin; Provisional	98.07
PLN00181	793	protein SPA1-RELATED; Provisional	98.06
KOG0272|consensus	459		98.05
KOG0772|consensus	641		98.04
KOG4497|consensus	447		98.01
KOG0273|consensus	524		98.01
PTZ00420	568	coronin; Provisional	97.97
KOG0275|consensus	508		97.97
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	97.95
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	97.94
COG1073	299	Hydrolases of the alpha/beta superfamily [General	97.94
KOG2100|consensus	755		97.93
KOG1553|consensus	517		97.93
KOG0305|consensus	484		97.93
TIGR03502	792	lipase_Pla1_cef extracellular lipase, Pla-1/cef fa	97.87
KOG2139|consensus	445		97.87
KOG1445|consensus	1012		97.87
KOG0263|consensus	707		97.86
KOG3253|consensus	784		97.85
KOG1274|consensus	933		97.84
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.83
PF06028	255	DUF915: Alpha/beta hydrolase of unknown function (	97.83
KOG2919|consensus	406		97.81
PF12146	79	Hydrolase_4: Putative lysophospholipase; InterPro:	97.8
PF11339	581	DUF3141: Protein of unknown function (DUF3141); In	97.8
PF05677	365	DUF818: Chlamydia CHLPS protein (DUF818); InterPro	97.79
KOG0284|consensus	464		97.78
PF06057	192	VirJ: Bacterial virulence protein (VirJ); InterPro	97.77
KOG0265|consensus	338		97.76
KOG2314|consensus	698		97.74
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.73
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.72
PF07519	474	Tannase: Tannase and feruloyl esterase; InterPro:	97.7
KOG1274|consensus	933		97.69
COG3243	445	PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me	97.68
PF10230	266	DUF2305: Uncharacterised conserved protein (DUF230	97.66
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.65
KOG0296|consensus	399		97.64
COG1770	682	PtrB Protease II [Amino acid transport and metabol	97.64
KOG0772|consensus	641		97.64
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	97.63
COG3545	181	Predicted esterase of the alpha/beta hydrolase fol	97.6
PTZ00421	493	coronin; Provisional	97.6
KOG2139|consensus	445		97.59
KOG0645|consensus	312		97.58
KOG1282|consensus	454		97.57
KOG2096|consensus	420		97.56
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	97.54
KOG0305|consensus	484		97.53
KOG0286|consensus	343		97.52
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.51
PLN00181	793	protein SPA1-RELATED; Provisional	97.5
PF10142	367	PhoPQ_related: PhoPQ-activated pathogenicity-relat	97.5
PF05705	240	DUF829: Eukaryotic protein of unknown function (DU	97.48
PF03096	283	Ndr: Ndr family; InterPro: IPR004142 This family c	97.48
KOG1516|consensus	545		97.47
KOG2048|consensus	691		97.45
KOG0265|consensus	338		97.45
PF00151	331	Lipase: Lipase; InterPro: IPR013818 Triglyceride l	97.45
KOG2394|consensus	636		97.43
KOG0275|consensus	508		97.43
KOG0283|consensus	712		97.41
COG3150	191	Predicted esterase [General function prediction on	97.41
KOG0645|consensus	312		97.39
KOG0282|consensus	503		97.36
COG4947	227	Uncharacterized protein conserved in bacteria [Fun	97.26
KOG1445|consensus	1012		97.25
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	97.24
PF07819	225	PGAP1: PGAP1-like protein; InterPro: IPR012908 The	97.21
KOG1273|consensus	405		97.19
PF12048	310	DUF3530: Protein of unknown function (DUF3530); In	97.17
KOG0263|consensus	707		97.17
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.14
PLN02209	437	serine carboxypeptidase	97.12
KOG0319|consensus	775		97.1
KOG0640|consensus	430		97.09
PF05577	434	Peptidase_S28: Serine carboxypeptidase S28; InterP	97.09
PLN03016	433	sinapoylglucose-malate O-sinapoyltransferase	97.06
KOG2315|consensus	566		97.05
KOG0289|consensus	506		96.98
PF08386	103	Abhydrolase_4: TAP-like protein; InterPro: IPR0135	96.97
KOG2919|consensus	406		96.97
KOG0295|consensus	406		96.96
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	96.91
KOG0296|consensus	399		96.91
KOG4840|consensus	299		96.91
PF01674	219	Lipase_2: Lipase (class 2); InterPro: IPR002918 Li	96.88
KOG3975|consensus	301		96.87
KOG1273|consensus	405		96.85
KOG2931|consensus	326		96.84
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	96.75
KOG0771|consensus	398		96.74
KOG2110|consensus	391		96.74
KOG0284|consensus	464		96.52
PF00450	415	Peptidase_S10: Serine carboxypeptidase; InterPro:	96.49
KOG4389|consensus	601		96.45
KOG0278|consensus	334		96.39
KOG2183|consensus	492		96.35
KOG0639|consensus	705		96.33
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.26
KOG2394|consensus	636		96.22
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	96.18
KOG0650|consensus	733		96.15
PLN02733	440	phosphatidylcholine-sterol O-acyltransferase	96.08
KOG0771|consensus	398		96.05
KOG0288|consensus	459		96.01
KOG2106|consensus	626		96.0
PF00975	229	Thioesterase: Thioesterase domain; InterPro: IPR00	95.99
PRK02888	635	nitrous-oxide reductase; Validated	95.88
KOG0264|consensus	422		95.85
KOG0306|consensus	888		95.8
KOG0643|consensus	327		95.76
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	95.62
COG3391	381	Uncharacterized conserved protein [Function unknow	95.61
KOG1524|consensus	737		95.61
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	95.56
PF05990	233	DUF900: Alpha/beta hydrolase of unknown function (	95.53
KOG0306|consensus	888		95.51
KOG0643|consensus	327		95.5
KOG2106|consensus	626		95.43
KOG2182|consensus	514		95.39
KOG0264|consensus	422		95.38
KOG3967|consensus	297		95.37
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	95.35
KOG2565|consensus	469		95.34
COG4814	288	Uncharacterized protein with an alpha/beta hydrola	95.31
KOG4378|consensus	673		95.29
KOG2110|consensus	391		95.28
KOG0282|consensus	503		95.27
KOG4388|consensus	880		95.17
KOG0639|consensus	705		95.05
KOG0319|consensus	775		95.04
KOG0295|consensus	406		94.97
KOG1920|consensus	1265		94.89
KOG0278|consensus	334		94.87
KOG1009|consensus	434		94.85
KOG2048|consensus	691		94.75
COG3391	381	Uncharacterized conserved protein [Function unknow	94.71
KOG1524|consensus	737		94.6
KOG0310|consensus	487		94.59
KOG1007|consensus	370		94.58
KOG0640|consensus	430		94.57
KOG1539|consensus	910		94.41
KOG0310|consensus	487		94.36
PF11187	224	DUF2974: Protein of unknown function (DUF2974); In	94.33
COG4287	507	PqaA PhoPQ-activated pathogenicity-related protein	94.09
KOG1551|consensus	371		93.93
KOG1332|consensus	299		93.88
PF07082	250	DUF1350: Protein of unknown function (DUF1350); In	93.88
KOG0289|consensus	506		93.74
PRK02888	635	nitrous-oxide reductase; Validated	93.68
KOG1332|consensus	299		93.49
KOG4378|consensus	673		93.42
KOG0647|consensus	347		93.36
COG4782	377	Uncharacterized protein conserved in bacteria [Fun	93.22
KOG0277|consensus	311		93.15
COG3319	257	Thioesterase domains of type I polyketide synthase	93.14
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	93.09
PF01764	140	Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr	92.95
KOG0316|consensus	307		92.94
KOG0641|consensus	350		92.88
COG1075	336	LipA Predicted acetyltransferases and hydrolases w	92.86
KOG0268|consensus	433		92.81
KOG1920|consensus	1265		92.54
PF05057	217	DUF676: Putative serine esterase (DUF676); InterPr	92.49
TIGR03712	511	acc_sec_asp2 accessory Sec system protein Asp2. Th	92.2
KOG1539|consensus	910		92.14
KOG2521|consensus	350		92.0
cd00741	153	Lipase Lipase. Lipases are esterases that can hydr	91.94
KOG4328|consensus	498		91.93
PF11288	207	DUF3089: Protein of unknown function (DUF3089); In	91.81
PRK13613	599	lipoprotein LpqB; Provisional	91.6
PRK13615	557	lipoprotein LpqB; Provisional	91.58
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	91.48
KOG0288|consensus	459		91.45
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	91.43
PF06850	202	PHB_depo_C: PHB de-polymerase C-terminus; InterPro	91.29
KOG1538|consensus	1081		90.99
KOG1063|consensus	764		90.9
KOG4547|consensus	541		90.79
COG3946	456	VirJ Type IV secretory pathway, VirJ component [In	90.77
cd00519	229	Lipase_3 Lipase (class 3). Lipases are esterases t	90.53
KOG2111|consensus	346		90.45
KOG0302|consensus	440		90.41
KOG0268|consensus	433		90.33
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	90.32
PRK13614	573	lipoprotein LpqB; Provisional	90.19
KOG0303|consensus	472		90.01
KOG0290|consensus	364		90.0
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	89.93
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	89.91
COG2939	498	Carboxypeptidase C (cathepsin A) [Amino acid trans	89.82
KOG1408|consensus	1080		89.75
PRK10252	1296	entF enterobactin synthase subunit F; Provisional	89.59
KOG1523|consensus	361		89.53
PRK13615	557	lipoprotein LpqB; Provisional	89.46
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	89.38
KOG4283|consensus	397		89.26
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	89.22
KOG1523|consensus	361		89.16
KOG3724|consensus	973		89.05
KOG0307|consensus	1049		89.03
KOG1034|consensus	385		88.98
PF02450	389	LCAT: Lecithin:cholesterol acyltransferase; InterP	88.43
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	88.43
KOG1963|consensus	792		88.42
PRK13613	599	lipoprotein LpqB; Provisional	88.35
KOG1009|consensus	434		88.3
KOG1408|consensus	1080		88.26
KOG0294|consensus	362		87.68
KOG0277|consensus	311		87.56
PF04083	63	Abhydro_lipase: Partial alpha/beta-hydrolase lipas	87.42
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	87.38
KOG0308|consensus	735		87.17
KOG0307|consensus	1049		86.97
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	86.41
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	86.36
PF00326	213	Peptidase_S9: Prolyl oligopeptidase family This fa	86.03
PLN02454	414	triacylglycerol lipase	85.62
KOG1538|consensus	1081		85.36
PLN00413	479	triacylglycerol lipase	85.32
PRK13614	573	lipoprotein LpqB; Provisional	84.98
KOG4283|consensus	397		84.82
PF04301	213	DUF452: Protein of unknown function (DUF452); Inte	84.69
KOG1520|consensus	376		84.02
PLN02408	365	phospholipase A1	83.91
KOG0647|consensus	347		83.28
PLN02571	413	triacylglycerol lipase	83.07
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	82.98
PF05787	524	DUF839: Bacterial protein of unknown function (DUF	82.83
PLN02934	515	triacylglycerol lipase	82.81
KOG2321|consensus	703		82.77
KOG0650|consensus	733		82.66
PF02089	279	Palm_thioest: Palmitoyl protein thioesterase; Inte	82.56
PF06259	177	Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR	82.51
PLN02310	405	triacylglycerol lipase	82.3
PLN02162	475	triacylglycerol lipase	82.19
KOG1063|consensus	764		81.89
KOG0269|consensus	839		81.1
PLN02324	415	triacylglycerol lipase	81.07
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	80.5
KOG0299|consensus	479		80.19
COG1073	299	Hydrolases of the alpha/beta superfamily [General	80.08
KOG0292|consensus	1202		80.02

>KOG2100|consensus

Probab=100.00  E-value=2.1e-49  Score=443.36  Aligned_cols=456  Identities=43%  Similarity=0.820  Sum_probs=391.2

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCC-ceeEccCCCEEEEEEcccccc
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFD-HLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~-~~~~spDg~~i~~~~~~~~~~  321 (790)
                      ....++..+.|.-+.+ .+.+++|.++...+.+|+.. +.|..........+|.+... .+.++.|+....++.+   ..
T Consensus       286 ~~~~~~~~~~W~~~~~~~~~~~~r~~~~~~~~~cd~~-~~~~~~~~~~~~~~W~~~~~~~~~~~~d~~~~~~~~~---~~  361 (755)
T KOG2100|consen  286 SGEYYVTNVKWDTTEKVLVVWTNREQNISVETLCDTP-GICRVVYEESSDGGWVEHQNVEPVFSSDGSSYLKVDS---VS  361 (755)
T ss_pred             cCceEEEEEEEecCccEEEEEEccCCCeeeeEEecCc-ccceeeEeccccccccccccccceEeecCCceeEEEe---ec
Confidence            4466778899999988 88999999999889999988 77776666544335886553 5889999977665665   33


Q ss_pred             CCCCCcCcccEEEEEEcCCC-CcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce
Q psy463          322 DGSTPVDSWDHLTFIDLDDQ-AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC  400 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~-~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~  400 (790)
                      ++.     +.|+..+....+ .      ++.||.+.|.+..++.|+.+++.++|.+....+..++||.+++.+  .....
T Consensus       362 ~~~-----~~hi~~~~~~~~~~------~~~lt~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~--~~~~~  428 (755)
T KOG2100|consen  362 DGG-----YNHIAYLKLSNGSE------PRMLTSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGS--GTVES  428 (755)
T ss_pred             cCC-----EEEEEEEEcCCCCc------cccccccceEEEEeccccCCCceEEEEecCCCCCceEEEEEEccc--ccccc
Confidence            441     778888887766 4      788999999998889999999999999988777889999999987  56666


Q ss_pred             eeecccccCCCcccEEEEEEecCCcEEEEEeecCCCC--eEEEEecCC-CeEEEeccchhHHHhhccCCCCceEEEEEEc
Q psy463          401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIP--EIMLFDKTG-QRLLYWDTNEDLRTALTNITLPSVEYMSVPI  477 (790)
Q Consensus       401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~--~i~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  477 (790)
                      +||...+   +.|.+.++++++..++++..+.++.+|  .+-+..... .....|..|+.++..+....++..+..++..
T Consensus       429 lt~~~~~---~~~~~~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~~~~~~~Le~n~~~~~~~~~~~~p~~~~~~i~~  505 (755)
T KOG2100|consen  429 LTCSLIT---GPCTYLSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKNSKTIVVLETNEELKKTIENVALPIVEFGKIEI  505 (755)
T ss_pred             ccccCCC---CcceEEEEecCCcccEEEEEccCCCCCcceeeccccccceEEEEeccChhhHHHhhcccCCcceeEEEEe
Confidence            8886443   678888999999999999999999977  454444444 3477889999999888888888888888888


Q ss_pred             CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463          478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR  557 (790)
Q Consensus       478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~  557 (790)
                       +|....+.+++|+++.  +.+++|+||.+||||+++.+...+...|..+++...|++|+.+|+||++++|..++.+..+
T Consensus       506 -~~~~~~~~~~lP~~~~--~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~  582 (755)
T KOG2100|consen  506 -DGITANAILILPPNFD--PSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPR  582 (755)
T ss_pred             -ccEEEEEEEecCCCCC--CCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhh
Confidence             9999999999999998  8889999999999999988899999999999999999999999999999999999999999


Q ss_pred             cCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          558 RLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       558 ~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                      ++|..++.|+..+++++.+ .+.+|.+||+|+|+|+||++++.++..++...|+|+++++||++|..|+..+.+++||.|
T Consensus       583 ~lG~~ev~D~~~~~~~~~~-~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~terymg~p  661 (755)
T KOG2100|consen  583 NLGDVEVKDQIEAVKKVLK-LPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYMGLP  661 (755)
T ss_pred             hcCCcchHHHHHHHHHHHh-cccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhhcCCC
Confidence            9999999999999999998 679999999999999999999999999887899999999999999999999999999988


Q ss_pred             CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                        .++...|.+.++.                                                                 
T Consensus       662 --~~~~~~y~e~~~~-----------------------------------------------------------------  674 (755)
T KOG2100|consen  662 --SENDKGYEESSVS-----------------------------------------------------------------  674 (755)
T ss_pred             --ccccchhhhcccc-----------------------------------------------------------------
Confidence              4444445544332                                                                 


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      ..+.+++++-+|++||+.|.+|+++++.+++++|+.+|+++++++||+++|++..  ...+++..+..||..|+.
T Consensus       675 ~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~  749 (755)
T KOG2100|consen  675 SPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFG  749 (755)
T ss_pred             chhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcC
Confidence            4455562333699999999999999999999999999999999999999999998  458999999999998863

>KOG2281|consensus

Probab=100.00  E-value=2.2e-45  Score=371.96  Aligned_cols=454  Identities=27%  Similarity=0.447  Sum_probs=355.8

Q ss_pred             CEEEEEEEccCCc--EEEEEeccCcceEEEEEECCCCce---------------------eEEEEEeCCCcccccCC--c
Q psy463          247 PVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTC---------------------DVVFSRDLDRGWFEPFD--H  301 (790)
Q Consensus       247 ~~~~~~~wspDg~--~~~~~~r~~~~~~i~~~~~~~g~~---------------------~~l~~~~~~~~~~~~~~--~  301 (790)
                      .|+.++.|.|||+  ++...+|.+.+.+|.+++.+....                     ..+.++ ....|+.+..  .
T Consensus       358 EYI~Ragwtpdgkyvwvq~LdR~Q~~l~iilip~~~f~~~~dn~~~~~~~~~~v~~~~~~~viyee-~sd~winiHd~f~  436 (867)
T KOG2281|consen  358 EYIARAGWTPDGKYVWVQVLDRSQQRLQIILIPPTLFIPKEDNLQLRTDLNMGVPDDVSPEVIYEE-PSDGWINIHDIFH  436 (867)
T ss_pred             eeeeeccccCCCcEEEEEEecCCcceeEEEEECHHHcCCccccHhhhhhhhhcCCcCCCcceEEec-CCCceEEhhhccc
Confidence            6899999999999  788889999999999998876543                     333443 4467875421  2


Q ss_pred             ee-Ecc-CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCC----c------------ccCCCcccccCCCeEEeEE-
Q psy463          302 LR-FSS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA----G------------IKDKVPVPLTRGRFTVTEI-  362 (790)
Q Consensus       302 ~~-~sp-Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~----~------------~~~~~~~~lt~~~~~~~~~-  362 (790)
                      +- -++ .+..=+.+++   +..|      +.|||++....+.    .            +.....+.||.++|++... 
T Consensus       437 ~~~~~~~e~~~~fi~as---E~~~------Frhly~its~lk~ng~~~s~~~~p~~~d~~c~i~ee~altSgeweVl~r~  507 (867)
T KOG2281|consen  437 PLPQSTHEASYPFIWAS---EETG------FRHLYLITSLLKPNGYCLSLGSAPLDQDFKCRIKEEIALTSGEWEVLARH  507 (867)
T ss_pred             ccccCCccceeeEEEec---cccc------ceEEEEEEeecccCCCcccccCCcccccccCcchhheeecccceeehhhc
Confidence            22 244 3333333566   6778      8999998653210    0            1112245688999988532 


Q ss_pred             -EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEE
Q psy463          363 -LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIM  440 (790)
Q Consensus       363 -~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~  440 (790)
                       +..+.-.+.+||.++..+|.+.+||+++.... |+..+||..        +.-....++-+-+.++.-++..+ ||.+.
T Consensus       508 Gi~VdE~~~LVYf~gt~d~PlE~hLyvvsye~~-g~~~rlt~~--------g~sh~~~l~~~~d~fv~~~~sv~sP~cv~  578 (867)
T KOG2281|consen  508 GIWVDEVRKLVYFVGTKDTPLEHHLYVVSYENP-GEIARLTEP--------GYSHSCELDQQCDHFVSYYSSVGSPPCVS  578 (867)
T ss_pred             CeeecccceEEEEEccCCCCceeeEEEEEEecC-CceeeccCC--------CcccchhhhhhhhhHhhhhhcCCCCceEE
Confidence             34566678899999999999999999999742 777777752        22233346666666655566666 88998


Q ss_pred             EEecCCCeEEEeccchhHHHhhccCCC-----CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccc
Q psy463          441 LFDKTGQRLLYWDTNEDLRTALTNITL-----PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQ  515 (790)
Q Consensus       441 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~  515 (790)
                      ++.+.+..--.+.....+...+.+...     -.++.+.|.++.|..++|++|+|.+++  ++++||+|++++|||+.|.
T Consensus       579 ~y~ls~~~~~~l~~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~--pgkkYptvl~VYGGP~VQl  656 (867)
T KOG2281|consen  579 LYSLSWPENDPLPKQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQ--PGKKYPTVLNVYGGPGVQL  656 (867)
T ss_pred             EEeccCCccCcccchhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccCC--CCCCCceEEEEcCCCceEE
Confidence            888876433333333333333322222     234668889988999999999999998  8999999999999999999


Q ss_pred             cccccccc--hHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEech
Q psy463          516 VTERFSVD--WNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSY  593 (790)
Q Consensus       516 ~~~~~~~~--~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~  593 (790)
                      +.+.|...  +....++++||+|+.+|.||+...|..|........|..+++|....+++|+++.+.+|.+||+|.||||
T Consensus       657 Vnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSY  736 (867)
T KOG2281|consen  657 VNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSY  736 (867)
T ss_pred             eeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEecccc
Confidence            99988743  3445567799999999999999999999999999999999999999999999988899999999999999


Q ss_pred             HHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCc
Q psy463          594 GGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  673 (790)
Q Consensus       594 GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~  673 (790)
                      |||+++.++.++|. .|+++|+++|+++|..|++.|+|+|||.|  ..+...|...++..++.++..             
T Consensus       737 GGYLSlm~L~~~P~-IfrvAIAGapVT~W~~YDTgYTERYMg~P--~~nE~gY~agSV~~~Veklpd-------------  800 (867)
T KOG2281|consen  737 GGYLSLMGLAQYPN-IFRVAIAGAPVTDWRLYDTGYTERYMGYP--DNNEHGYGAGSVAGHVEKLPD-------------  800 (867)
T ss_pred             ccHHHHHHhhcCcc-eeeEEeccCcceeeeeecccchhhhcCCC--ccchhcccchhHHHHHhhCCC-------------
Confidence            99999999999986 99999999999999999999999999999  777888887776666655531             


Q ss_pred             cChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHh
Q psy463          674 VHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQH  753 (790)
Q Consensus       674 v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~  753 (790)
                                                                       - ...+|++||.-|++|++.+.-.|..+|.+
T Consensus       801 -------------------------------------------------e-pnRLlLvHGliDENVHF~Hts~Lvs~lvk  830 (867)
T KOG2281|consen  801 -------------------------------------------------E-PNRLLLVHGLIDENVHFAHTSRLVSALVK  830 (867)
T ss_pred             -------------------------------------------------C-CceEEEEecccccchhhhhHHHHHHHHHh
Confidence                                                             0 34589999999999999999999999999


Q ss_pred             cCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHH
Q psy463          754 ADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDS  787 (790)
Q Consensus       754 ~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~  787 (790)
                      +|++.++++||++.|++..  ....+-..++.|+++
T Consensus       831 agKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~  866 (867)
T KOG2281|consen  831 AGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE  866 (867)
T ss_pred             CCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence            9999999999999999997  666777889999875

>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]

Probab=100.00  E-value=5.5e-43  Score=390.95  Aligned_cols=442  Identities=24%  Similarity=0.325  Sum_probs=316.1

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCc---c-eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQN---R-ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~---~-~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                      ........|.+|++.++......+   . ...+.....++....++....   +   ...+.|.+||+.+++...   +.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~gk~~~~~~~---~~  237 (620)
T COG1506         167 NLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGELESLTPGEG---S---ISKLAFDADGKSIALLGT---ES  237 (620)
T ss_pred             CCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCceEEEcCCCc---e---eeeeeeCCCCCeeEEecc---CC
Confidence            344555666666775554433222   1 223333334555555554322   1   457899999998886554   22


Q ss_pred             C-CCCCcCcccEEEEEEcCCCCcccCCCccc-ccCCCe-EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc
Q psy463          322 D-GSTPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRF-TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP  398 (790)
Q Consensus       322 ~-g~~~~~~~~~l~~~d~~~~~~~~~~~~~~-lt~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~  398 (790)
                      . +.   .....+++++.+.++      ... +...+. .......+.-++..++|.+.... +...++.+....  ...
T Consensus       238 ~~~~---~~~~~~~~~~~~~~~------~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~l~~~~~~~--~~~  305 (620)
T COG1506         238 DRGL---AEGDFILLLDGELGE------VDGDLSSGDDTRGAWAVEGGLDGDGLLFIATDGG-GSSPLFRVDDLG--GGV  305 (620)
T ss_pred             ccCc---cccceEEEEeccccc------cceeeccCCcccCcHHhccccCCCcEEEEEecCC-CceEEEEEeccC--Cce
Confidence            2 21   123456666633333      222 111110 00011122245667888777622 225666665443  222


Q ss_pred             ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEc
Q psy463          399 ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPI  477 (790)
Q Consensus       399 ~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  477 (790)
                      ..+..       ..+.+.  .|+.+++.+++..+++. ||++++++. +.+.+....+.   ..+....+.+++.+++++
T Consensus       306 ~~~~~-------~~~~v~--~f~~~~~~~~~~~s~~~~p~~i~~~~~-~~~~~~~~~~~---~~~~~~~~~~~e~~~~~~  372 (620)
T COG1506         306 EGLSG-------DDGGVP--GFDVDGRKLALAYSSPTEPPEIYLYDR-GEEAKLTSSNN---SGLKKVKLAEPEPVTYKS  372 (620)
T ss_pred             eeecC-------CCceEE--EEeeCCCEEEEEecCCCCccceEEEcC-CCceEEeeccc---ccccccccCCceEEEEEc
Confidence            21211       223443  44459999999999999 999999987 43333333322   235677889999999999


Q ss_pred             CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463          478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR  557 (790)
Q Consensus       478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~  557 (790)
                      .||.++++++++|.+++  +.+++|+||++||||..+.   .+...+..+.++.+||+|+.+|+||++++|++|.....+
T Consensus       373 ~dG~~i~~~l~~P~~~~--~~k~yP~i~~~hGGP~~~~---~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~  447 (620)
T COG1506         373 NDGETIHGWLYKPPGFD--PRKKYPLIVYIHGGPSAQV---GYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRG  447 (620)
T ss_pred             CCCCEEEEEEecCCCCC--CCCCCCEEEEeCCCCcccc---ccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhh
Confidence            99999999999999988  7778999999999997743   356667777888899999999999999999999999999


Q ss_pred             cCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          558 RLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       558 ~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                      .+|..+++|+.++++++.+ .+.+|++|++|+|+|+||+++++++.+.+  .|+++++..+.++|..+...+.+.+++.+
T Consensus       448 ~~g~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~SyGGymtl~~~~~~~--~f~a~~~~~~~~~~~~~~~~~~~~~~~~~  524 (620)
T COG1506         448 DWGGVDLEDLIAAVDALVK-LPLVDPERIGITGGSYGGYMTLLAATKTP--RFKAAVAVAGGVDWLLYFGESTEGLRFDP  524 (620)
T ss_pred             ccCCccHHHHHHHHHHHHh-CCCcChHHeEEeccChHHHHHHHHHhcCc--hhheEEeccCcchhhhhccccchhhcCCH
Confidence            9999999999999998877 99999999999999999999999999765  89999999998888765544444443222


Q ss_pred             CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                        ...                                                        ...+..  ....|...+|+
T Consensus       525 --~~~--------------------------------------------------------~~~~~~--~~~~~~~~sp~  544 (620)
T COG1506         525 --EEN--------------------------------------------------------GGGPPE--DREKYEDRSPI  544 (620)
T ss_pred             --HHh--------------------------------------------------------CCCccc--ChHHHHhcChh
Confidence              000                                                        000000  34556777788


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      .+++++ ++|+|||||++|.+||++++.+|+++|+.+|+++++++||+++|++..  +....++.+++||++||+
T Consensus       545 ~~~~~i-~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~  618 (620)
T COG1506         545 FYADNI-KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK  618 (620)
T ss_pred             hhhccc-CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence            999999 999999999999999999999999999999999999999999999997  788899999999999985

>PRK10115 protease 2; Provisional

Probab=100.00  E-value=7.7e-35  Score=326.60  Aligned_cols=530  Identities=14%  Similarity=0.079  Sum_probs=338.8

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...|||||+.|+|..+..+..        +.+|+++++.++.    .+...++...    ....|.++++. ++|.+...
T Consensus       131 ~~~~Spdg~~la~~~d~~G~E--------~~~l~v~d~~tg~----~l~~~i~~~~----~~~~w~~D~~~-~~y~~~~~  193 (686)
T PRK10115        131 GMAITPDNTIMALAEDFLSRR--------QYGIRFRNLETGN----WYPELLDNVE----PSFVWANDSWT-FYYVRKHP  193 (686)
T ss_pred             EEEECCCCCEEEEEecCCCcE--------EEEEEEEECCCCC----CCCccccCcc----eEEEEeeCCCE-EEEEEecC
Confidence            347899999999987644432        4489999998774    1233333322    23577666553 66665521


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                        ..    .+..+||+.++.++...    .+.+.            .+   ..........-+.|++++...........
T Consensus       194 --~~----~~~~~v~~h~lgt~~~~----d~lv~------------~e---~~~~~~~~~~~s~d~~~l~i~~~~~~~~~  248 (686)
T PRK10115        194 --VT----LLPYQVWRHTIGTPASQ----DELVY------------EE---KDDTFYVSLHKTTSKHYVVIHLASATTSE  248 (686)
T ss_pred             --CC----CCCCEEEEEECCCChhH----CeEEE------------ee---CCCCEEEEEEEcCCCCEEEEEEECCcccc
Confidence              10    12378999999987321    11222            10   11112222333448984444333333344


Q ss_pred             EEEEE--CCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC-CCcccCCCc
Q psy463          273 ITRCS--INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD-QAGIKDKVP  349 (790)
Q Consensus       273 i~~~~--~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-~~~~~~~~~  349 (790)
                      +++++  ..+++.+.+.......       .......+..+++...    .++.     ...|..+++.+ ++      .
T Consensus       249 ~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ly~~tn----~~~~-----~~~l~~~~~~~~~~------~  306 (686)
T PRK10115        249 VLLLDAELADAEPFVFLPRRKDH-------EYSLDHYQHRFYLRSN----RHGK-----NFGLYRTRVRDEQQ------W  306 (686)
T ss_pred             EEEEECcCCCCCceEEEECCCCC-------EEEEEeCCCEEEEEEc----CCCC-----CceEEEecCCCccc------C
Confidence            66666  4445544444432211       1222233456664443    3221     45788888763 33      3


Q ss_pred             ccccCC--CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEe--cCCc
Q psy463          350 VPLTRG--RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFS--TNVS  425 (790)
Q Consensus       350 ~~lt~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s--~dg~  425 (790)
                      +.|...  ...+.. +.++  ++.|++....+.  ...|+.++..+  ++...|+..      .........++  +++.
T Consensus       307 ~~l~~~~~~~~i~~-~~~~--~~~l~~~~~~~g--~~~l~~~~~~~--~~~~~l~~~------~~~~~~~~~~~~~~~~~  373 (686)
T PRK10115        307 EELIPPRENIMLEG-FTLF--TDWLVVEERQRG--LTSLRQINRKT--REVIGIAFD------DPAYVTWIAYNPEPETS  373 (686)
T ss_pred             eEEECCCCCCEEEE-EEEE--CCEEEEEEEeCC--EEEEEEEcCCC--CceEEecCC------CCceEeeecccCCCCCc
Confidence            444433  234443 5565  557888777632  37899998765  445554411      11122333444  6677


Q ss_pred             EEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEE
Q psy463          426 YYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLL  504 (790)
Q Consensus       426 ~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~v  504 (790)
                      .+++.+++.. |+.+|.+|..+++.+.++....  ..+..... .++.+++++.||.+|+++++.++...  ..++.|+|
T Consensus       374 ~~~~~~ss~~~P~~~y~~d~~~~~~~~l~~~~~--~~~~~~~~-~~e~v~~~s~DG~~Ip~~l~~~~~~~--~~~~~P~l  448 (686)
T PRK10115        374 RLRYGYSSMTTPDTLFELDMDTGERRVLKQTEV--PGFDAANY-RSEHLWITARDGVEVPVSLVYHRKHF--RKGHNPLL  448 (686)
T ss_pred             eEEEEEecCCCCCEEEEEECCCCcEEEEEecCC--CCcCcccc-EEEEEEEECCCCCEEEEEEEEECCCC--CCCCCCEE
Confidence            7888888888 9999999998876666653320  01222223 78899999999999999665544322  24567999


Q ss_pred             EEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCC
Q psy463          505 IHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKT  584 (790)
Q Consensus       505 v~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~  584 (790)
                      |++||+++... ...|+..+  +.+.++||+|+.+|+||++++|..|..+....++...++|+++++++|++ .+++|++
T Consensus       449 l~~hGg~~~~~-~p~f~~~~--~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~-~g~~d~~  524 (686)
T PRK10115        449 VYGYGSYGASI-DADFSFSR--LSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLK-LGYGSPS  524 (686)
T ss_pred             EEEECCCCCCC-CCCccHHH--HHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHH-cCCCChH
Confidence            99999998754 44555433  34555999999999999999999999988888888999999999999998 7999999


Q ss_pred             ceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEE
Q psy463          585 RTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYL  664 (790)
Q Consensus       585 ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l  664 (790)
                      |++|+|.|+||+++.+++.++|+ +|+|+|+..|+.|+..+-        ..+........+..                
T Consensus       525 rl~i~G~S~GG~l~~~~~~~~Pd-lf~A~v~~vp~~D~~~~~--------~~~~~p~~~~~~~e----------------  579 (686)
T PRK10115        525 LCYGMGGSAGGMLMGVAINQRPE-LFHGVIAQVPFVDVVTTM--------LDESIPLTTGEFEE----------------  579 (686)
T ss_pred             HeEEEEECHHHHHHHHHHhcChh-heeEEEecCCchhHhhhc--------ccCCCCCChhHHHH----------------
Confidence            99999999999999999998885 999999999999976320        00000000000000                


Q ss_pred             EEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCcc-EEEEecCCCcccchhh
Q psy463          665 LVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQ-YLLVHGTMDDNVHFQQ  743 (790)
Q Consensus       665 ~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P-~Lii~G~~D~~v~~~~  743 (790)
                                                        .+.|.-+.........||+.+++++ +.| +|++||.+|.+||+.+
T Consensus       580 ----------------------------------~G~p~~~~~~~~l~~~SP~~~v~~~-~~P~lLi~~g~~D~RV~~~~  624 (686)
T PRK10115        580 ----------------------------------WGNPQDPQYYEYMKSYSPYDNVTAQ-AYPHLLVTTGLHDSQVQYWE  624 (686)
T ss_pred             ----------------------------------hCCCCCHHHHHHHHHcCchhccCcc-CCCceeEEecCCCCCcCchH
Confidence                                              0111111112233445666889999 888 6777999999999999


Q ss_pred             hHHHHHHHHhcCCceEEEEc---CCCCCcCCCcchHHHH---HHHHHHHHh
Q psy463          744 SMMLAKSLQHADIMFQSQTY---PDEEHGLIGVRPHFYH---TLERFLDSC  788 (790)
Q Consensus       744 ~~~l~~~l~~~g~~~~~~~~---p~~~H~~~~~~~~~~~---~i~~fl~~~  788 (790)
                      +.+++.+|++.+++++++++   +++||+...++...++   ....||-+.
T Consensus       625 ~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~  675 (686)
T PRK10115        625 PAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIAL  675 (686)
T ss_pred             HHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999888888   9999995543333333   335555543

>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification

Probab=99.95  E-value=1.7e-27  Score=232.54  Aligned_cols=202  Identities=30%  Similarity=0.433  Sum_probs=163.6

Q ss_pred             ccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHH
Q psy463          521 SVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGL  600 (790)
Q Consensus       521 ~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~  600 (790)
                      ++.+..++++++||+|+.+|+||++++|..|.....+.++...++|+.++++++++ .+.+|++||+|+|+|+||++++.
T Consensus         2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~-~~~iD~~ri~i~G~S~GG~~a~~   80 (213)
T PF00326_consen    2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIK-QYYIDPDRIGIMGHSYGGYLALL   80 (213)
T ss_dssp             --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHH-TTSEEEEEEEEEEETHHHHHHHH
T ss_pred             eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhc-cccccceeEEEEcccccccccch
Confidence            44577888888999999999999999999999999999999999999999999998 66899999999999999999999


Q ss_pred             HHhcCCCCceEEEEEeCCCCCccccccc---chh-hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccCh
Q psy463          601 ALALDPSNVFKCGISVAPVTDWIYYDTI---YSE-RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHF  676 (790)
Q Consensus       601 ~a~~~p~~~~~~~v~~~~~~~~~~~~~~---~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~  676 (790)
                      ++.++|+ .|+++++.+|+.++..+...   +.. .+.+.                                        
T Consensus        81 ~~~~~~~-~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~----------------------------------------  119 (213)
T PF00326_consen   81 AATQHPD-RFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEY----------------------------------------  119 (213)
T ss_dssp             HHHHTCC-GSSEEEEESE-SSTTCSBHHTCCHHHGHHHHH----------------------------------------
T ss_pred             hhcccce-eeeeeeccceecchhccccccccccccccccc----------------------------------------
Confidence            9998875 99999999999887643211   111 01000                                        


Q ss_pred             hhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhc--cCCccEEEEecCCCcccchhhhHHHHHHHHhc
Q psy463          677 QQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDR--IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA  754 (790)
Q Consensus       677 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~  754 (790)
                                               +........|...++...+.+  + ++|+||+||++|.+||+.++..++++|++.
T Consensus       120 -------------------------~~~~~~~~~~~~~s~~~~~~~~~~-~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~  173 (213)
T PF00326_consen  120 -------------------------GDPWDNPEFYRELSPISPADNVQI-KPPVLIIHGENDPRVPPSQSLRLYNALRKA  173 (213)
T ss_dssp             -------------------------SSTTTSHHHHHHHHHGGGGGGCGG-GSEEEEEEETTBSSSTTHHHHHHHHHHHHT
T ss_pred             -------------------------CccchhhhhhhhhccccccccccC-CCCEEEEccCCCCccCHHHHHHHHHHHHhc
Confidence                                     000112334445555566777  7 899999999999999999999999999999


Q ss_pred             CCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       755 g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      |+++++++||+++|.+..  ...++++.+.+||+++|+
T Consensus       174 g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~  211 (213)
T PF00326_consen  174 GKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK  211 (213)
T ss_dssp             TSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence            999999999999998886  667899999999999986

; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.95  E-value=3.4e-26  Score=240.05  Aligned_cols=167  Identities=36%  Similarity=0.729  Sum_probs=143.0

Q ss_pred             CCCCEEEEEEEccCCc--EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEc-cCCCEEEEEEccccc
Q psy463          244 NVEPVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFS-SDGKKMLLILSHNQE  320 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~--~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~s-pDg~~i~~~~~~~~~  320 (790)
                      ..+.++..+.|++|++  ++.+.+|.++...+.+||+.+|.++.+..+. ..+|++....+.|. +||..++++.    +
T Consensus       181 ~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~-~~~Wv~~~~~~~~~~~~~~~~l~~s----~  255 (353)
T PF00930_consen  181 PQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEET-SDGWVDVYDPPHFLGPDGNEFLWIS----E  255 (353)
T ss_dssp             TSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEE-SSSSSSSSSEEEE-TTTSSEEEEEE----E
T ss_pred             CCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEec-CCcceeeecccccccCCCCEEEEEE----E
Confidence            4578899999999999  6788999999999999999999998887665 47899877788886 9999998554    4


Q ss_pred             cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC-CCCCCcc
Q psy463          321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA-DPTATPE  399 (790)
Q Consensus       321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~  399 (790)
                      ++|      +.|||+++.+++.      .++||.|.+++..++.|+++++.|||.++...|..++||+++++ +  ++++
T Consensus       256 ~~G------~~hly~~~~~~~~------~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~--~~~~  321 (353)
T PF00930_consen  256 RDG------YRHLYLYDLDGGK------PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSG--GEPK  321 (353)
T ss_dssp             TTS------SEEEEEEETTSSE------EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTET--TEEE
T ss_pred             cCC------CcEEEEEcccccc------eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCC--CCeE
Confidence            788      9999999999987      88999999999888999999999999999977888999999999 6  8899


Q ss_pred             eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCC
Q psy463          400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGI  436 (790)
Q Consensus       400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~  436 (790)
                      ||||.       .....+++|||||++++..+++++.
T Consensus       322 ~LT~~-------~~~~~~~~~Spdg~y~v~~~s~~~~  351 (353)
T PF00930_consen  322 CLTCE-------DGDHYSASFSPDGKYYVDTYSGPDT  351 (353)
T ss_dssp             ESSTT-------SSTTEEEEE-TTSSEEEEEEESSSS
T ss_pred             eccCC-------CCCceEEEECCCCCEEEEEEcCCCC
Confidence            99995       2222789999999999999999983

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.89  E-value=1.9e-21  Score=208.05  Aligned_cols=232  Identities=13%  Similarity=0.114  Sum_probs=157.5

Q ss_pred             ccccccCCce--EEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEec
Q psy463          113 HLRFSSDGKK--MLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSH  190 (790)
Q Consensus       113 ~~~~spdg~~--i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~  190 (790)
                      .|+|||||++  ++|++.+.+          ..+||++++++++      ..+|+..+..... ..|+|+++. |+|.+.
T Consensus       189 sP~wSPDG~~~~~~y~S~~~g----------~~~I~~~~l~~g~------~~~lt~~~g~~~~-p~wSPDG~~-Laf~s~  250 (428)
T PRK01029        189 TPTWMHIGSGFPYLYVSYKLG----------VPKIFLGSLENPA------GKKILALQGNQLM-PTFSPRKKL-LAFISD  250 (428)
T ss_pred             cceEccCCCceEEEEEEccCC----------CceEEEEECCCCC------ceEeecCCCCccc-eEECCCCCE-EEEEEC
Confidence            5899999987  556775443          2389999999885      5667665443333 588888876 777664


Q ss_pred             ccCCCCCCCccccceeEEE--ecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccC
Q psy463          191 NQESDGSTPVDSWDHLTFI--DLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQ  268 (790)
Q Consensus       191 ~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~  268 (790)
                      ..+.         .+||+.  +++++..   ..+++++.                ........+.|||||+.++++....
T Consensus       251 ~~g~---------~di~~~~~~~~~g~~---g~~~~lt~----------------~~~~~~~~p~wSPDG~~Laf~s~~~  302 (428)
T PRK01029        251 RYGN---------PDLFIQSFSLETGAI---GKPRRLLN----------------EAFGTQGNPSFSPDGTRLVFVSNKD  302 (428)
T ss_pred             CCCC---------cceeEEEeecccCCC---CcceEeec----------------CCCCCcCCeEECCCCCEEEEEECCC
Confidence            2211         467764  5554311   01456661                1123345789999999555554434


Q ss_pred             cceEEEEEECCC--CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccC
Q psy463          269 NRARITRCSINE--GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD  346 (790)
Q Consensus       269 ~~~~i~~~~~~~--g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~  346 (790)
                      +..+||++++.+  +..+.++....      ....|.|||||++|+|...    ..|      ..+|+++|+++++    
T Consensus       303 g~~~ly~~~~~~~g~~~~~lt~~~~------~~~~p~wSPDG~~Laf~~~----~~g------~~~I~v~dl~~g~----  362 (428)
T PRK01029        303 GRPRIYIMQIDPEGQSPRLLTKKYR------NSSCPAWSPDGKKIAFCSV----IKG------VRQICVYDLATGR----  362 (428)
T ss_pred             CCceEEEEECcccccceEEeccCCC------CccceeECCCCCEEEEEEc----CCC------CcEEEEEECCCCC----
Confidence            556799998863  44565654321      1357999999999997654    445      5689999999998    


Q ss_pred             CCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCC
Q psy463          347 KVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNV  424 (790)
Q Consensus       347 ~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg  424 (790)
                        .++|+.+...... +.|+|||+.|+|.+....  ...||.+++++  ++.+.|+.       ..+....++|||-.
T Consensus       363 --~~~Lt~~~~~~~~-p~wSpDG~~L~f~~~~~g--~~~L~~vdl~~--g~~~~Lt~-------~~g~~~~p~Ws~~~  426 (428)
T PRK01029        363 --DYQLTTSPENKES-PSWAIDSLHLVYSAGNSN--ESELYLISLIT--KKTRKIVI-------GSGEKRFPSWGAFP  426 (428)
T ss_pred             --eEEccCCCCCccc-eEECCCCCEEEEEECCCC--CceEEEEECCC--CCEEEeec-------CCCcccCceecCCC
Confidence              8888876433343 899999999999887632  27899999988  67777775       34455678888743

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.88  E-value=1.4e-20  Score=201.37  Aligned_cols=263  Identities=16%  Similarity=0.188  Sum_probs=183.8

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCcc-EEEEeccc
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNP-LLILSHNQ  192 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~-~~~~~~~~  192 (790)
                      |.++  +++|+|+....+...+.+    -.+||++|.+++.      .++||.+...... ..|.|+++.. ++|++...
T Consensus       142 ~g~~--~~~iayv~~~~~~~~~~~----~~~l~~~d~dG~~------~~~lt~~~~~~~s-P~wSPDG~~~~~~y~S~~~  208 (428)
T PRK01029        142 PGIS--SGKIIFSLSTTNSDTELK----QGELWSVDYDGQN------LRPLTQEHSLSIT-PTWMHIGSGFPYLYVSYKL  208 (428)
T ss_pred             Cccc--cCEEEEEEeeCCcccccc----cceEEEEcCCCCC------ceEcccCCCCccc-ceEccCCCceEEEEEEccC
Confidence            5555  889999986543322111    2389999998875      6788887554433 4899988653 45565432


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                      +         ..+||++++++|+      ..+|+                 ...+....+.|||||+.++++....+..+
T Consensus       209 g---------~~~I~~~~l~~g~------~~~lt-----------------~~~g~~~~p~wSPDG~~Laf~s~~~g~~d  256 (428)
T PRK01029        209 G---------VPKIFLGSLENPA------GKKIL-----------------ALQGNQLMPTFSPRKKLLAFISDRYGNPD  256 (428)
T ss_pred             C---------CceEEEEECCCCC------ceEee-----------------cCCCCccceEECCCCCEEEEEECCCCCcc
Confidence            2         2799999999987      55666                 44455567999999996666554334445


Q ss_pred             EEEE--ECCC---CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC--CCccc
Q psy463          273 ITRC--SINE---GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD--QAGIK  345 (790)
Q Consensus       273 i~~~--~~~~---g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~--~~~~~  345 (790)
                      +|+.  ++.+   ++.++++....     .....|.|||||++|+|...    .+|      ..+||++++++  ++   
T Consensus       257 i~~~~~~~~~g~~g~~~~lt~~~~-----~~~~~p~wSPDG~~Laf~s~----~~g------~~~ly~~~~~~~g~~---  318 (428)
T PRK01029        257 LFIQSFSLETGAIGKPRRLLNEAF-----GTQGNPSFSPDGTRLVFVSN----KDG------RPRIYIMQIDPEGQS---  318 (428)
T ss_pred             eeEEEeecccCCCCcceEeecCCC-----CCcCCeEECCCCCEEEEEEC----CCC------CceEEEEECcccccc---
Confidence            6664  5554   45566764321     11347999999999997553    556      56899998853  43   


Q ss_pred             CCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCc
Q psy463          346 DKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVS  425 (790)
Q Consensus       346 ~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~  425 (790)
                         .++||....... .+.|||||++|+|.+....  ..+|+++++++  ++.++|+.       +......+.|||||+
T Consensus       319 ---~~~lt~~~~~~~-~p~wSPDG~~Laf~~~~~g--~~~I~v~dl~~--g~~~~Lt~-------~~~~~~~p~wSpDG~  383 (428)
T PRK01029        319 ---PRLLTKKYRNSS-CPAWSPDGKKIAFCSVIKG--VRQICVYDLAT--GRDYQLTT-------SPENKESPSWAIDSL  383 (428)
T ss_pred             ---eEEeccCCCCcc-ceeECCCCCEEEEEEcCCC--CcEEEEEECCC--CCeEEccC-------CCCCccceEECCCCC
Confidence               667876543333 3899999999999987632  27899999988  77777875       233456799999999


Q ss_pred             EEEEEeecCCCCeEEEEecCCCeEEEecc
Q psy463          426 YYVLSCIGPGIPEIMLFDKTGQRLLYWDT  454 (790)
Q Consensus       426 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~  454 (790)
                      +|+|.....+...||++++++++.+.++.
T Consensus       384 ~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~  412 (428)
T PRK01029        384 HLVYSAGNSNESELYLISLITKKTRKIVI  412 (428)
T ss_pred             EEEEEECCCCCceEEEEECCCCCEEEeec
Confidence            99998776667789999998877766643

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.88  E-value=2.2e-20  Score=198.16  Aligned_cols=235  Identities=10%  Similarity=0.077  Sum_probs=174.0

Q ss_pred             cEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCC
Q psy463          143 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  222 (790)
Q Consensus       143 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  222 (790)
                      .+||+.|.++..      .++++.+.  ......|+|++++.++|.+....         ..+||++|+++|+      .
T Consensus       169 ~~l~~~d~dg~~------~~~~~~~~--~~~~p~wSpDG~~~i~y~s~~~~---------~~~Iyv~dl~tg~------~  225 (419)
T PRK04043        169 SNIVLADYTLTY------QKVIVKGG--LNIFPKWANKEQTAFYYTSYGER---------KPTLYKYNLYTGK------K  225 (419)
T ss_pred             ceEEEECCCCCc------eeEEccCC--CeEeEEECCCCCcEEEEEEccCC---------CCEEEEEECCCCc------E
Confidence            399999998774      56677764  44457888887764555554211         2699999999987      5


Q ss_pred             ccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCce
Q psy463          223 VPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHL  302 (790)
Q Consensus       223 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~  302 (790)
                      ++|+                 ...+....+.|||||+.++++....+..+||++++++++.++|+....      ....+
T Consensus       226 ~~lt-----------------~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~------~d~~p  282 (419)
T PRK04043        226 EKIA-----------------SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPG------IDVNG  282 (419)
T ss_pred             EEEe-----------------cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCC------ccCcc
Confidence            6666                 445556678999999954444333456789999999999988886542      13478


Q ss_pred             eEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCC-
Q psy463          303 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSP-  381 (790)
Q Consensus       303 ~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~-  381 (790)
                      .|||||++|+|+..    +.|      ..+||++|+++++      .+++|....  .. ..|||||+.|+|.+..... 
T Consensus       283 ~~SPDG~~I~F~Sd----r~g------~~~Iy~~dl~~g~------~~rlt~~g~--~~-~~~SPDG~~Ia~~~~~~~~~  343 (419)
T PRK04043        283 NFVEDDKRIVFVSD----RLG------YPNIFMKKLNSGS------VEQVVFHGK--NN-SSVSTYKNYIVYSSRETNNE  343 (419)
T ss_pred             EECCCCCEEEEEEC----CCC------CceEEEEECCCCC------eEeCccCCC--cC-ceECCCCCEEEEEEcCCCcc
Confidence            99999999997654    556      6799999999988      778875422  12 5899999999999876321 


Q ss_pred             ---ceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463          382 ---IVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       382 ---~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                         ...+||.+++++  ++.+.||..       . ....++|||||+.|+|.....+...|+++++++...+.+
T Consensus       344 ~~~~~~~I~v~d~~~--g~~~~LT~~-------~-~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~~~l  407 (419)
T PRK04043        344 FGKNTFNLYLISTNS--DYIRRLTAN-------G-VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKSFLF  407 (419)
T ss_pred             cCCCCcEEEEEECCC--CCeEECCCC-------C-CcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCeeEEe
Confidence               236899999988  778888862       1 233599999999999997765566799999998766554

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.88  E-value=1.1e-20  Score=200.61  Aligned_cols=216  Identities=10%  Similarity=0.083  Sum_probs=151.9

Q ss_pred             ccccccCCce-EEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          113 HLRFSSDGKK-MLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       113 ~~~~spdg~~-i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      .|.|||||++ ++|++...+          ..+||++++.+++      ..+|+..+... ....|+|++++ ++|....
T Consensus       192 ~p~wSpDG~~~i~y~s~~~~----------~~~Iyv~dl~tg~------~~~lt~~~g~~-~~~~~SPDG~~-la~~~~~  253 (419)
T PRK04043        192 FPKWANKEQTAFYYTSYGER----------KPTLYKYNLYTGK------KEKIASSQGML-VVSDVSKDGSK-LLLTMAP  253 (419)
T ss_pred             eEEECCCCCcEEEEEEccCC----------CCEEEEEECCCCc------EEEEecCCCcE-EeeEECCCCCE-EEEEEcc
Confidence            5799999996 666665432          1289999998885      56676644332 23568888776 5555543


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA  271 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~  271 (790)
                      ..         ..+||++++++++      .++||                 ........+.|||||+.+++++...+..
T Consensus       254 ~g---------~~~Iy~~dl~~g~------~~~LT-----------------~~~~~d~~p~~SPDG~~I~F~Sdr~g~~  301 (419)
T PRK04043        254 KG---------QPDIYLYDTNTKT------LTQIT-----------------NYPGIDVNGNFVEDDKRIVFVSDRLGYP  301 (419)
T ss_pred             CC---------CcEEEEEECCCCc------EEEcc-----------------cCCCccCccEECCCCCEEEEEECCCCCc
Confidence            11         2799999999887      56666                 4444456789999999555554444567


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      +||++++++|+.++++...        ...+.|||||+.|+|+..   +.+.. ......+|+++|+++++      .++
T Consensus       302 ~Iy~~dl~~g~~~rlt~~g--------~~~~~~SPDG~~Ia~~~~---~~~~~-~~~~~~~I~v~d~~~g~------~~~  363 (419)
T PRK04043        302 NIFMKKLNSGSVEQVVFHG--------KNNSSVSTYKNYIVYSSR---ETNNE-FGKNTFNLYLISTNSDY------IRR  363 (419)
T ss_pred             eEEEEECCCCCeEeCccCC--------CcCceECCCCCEEEEEEc---CCCcc-cCCCCcEEEEEECCCCC------eEE
Confidence            8999999999998887542        114699999999998765   22110 00003589999999998      889


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                      ||.+...  ..++|+|||+.|+|.+..+.  ...|+.+++++  .....|.
T Consensus       364 LT~~~~~--~~p~~SPDG~~I~f~~~~~~--~~~L~~~~l~g--~~~~~l~  408 (419)
T PRK04043        364 LTANGVN--QFPRFSSDGGSIMFIKYLGN--QSALGIIRLNY--NKSFLFP  408 (419)
T ss_pred             CCCCCCc--CCeEECCCCCEEEEEEccCC--cEEEEEEecCC--CeeEEee
Confidence            9986432  24899999999999988733  37899999987  4444443

>COG1770 PtrB Protease II [Amino acid transport and metabolism]

Probab=99.87  E-value=1.6e-17  Score=173.43  Aligned_cols=489  Identities=16%  Similarity=0.146  Sum_probs=310.9

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      .+.|||++.+++..+..+.  .+|      .|-+.++.++.    .....+++    +..-..|.++++. ++|.+..+.
T Consensus       134 ~~~s~D~~~la~s~D~~G~--e~y------~lr~kdL~tg~----~~~d~i~~----~~~~~~Wa~d~~~-lfYt~~d~~  196 (682)
T COG1770         134 ASISPDHNLLAYSVDVLGD--EQY------TLRFKDLATGE----ELPDEITN----TSGSFAWAADGKT-LFYTRLDEN  196 (682)
T ss_pred             eeeCCCCceEEEEEecccc--cEE------EEEEEeccccc----ccchhhcc----cccceEEecCCCe-EEEEEEcCC
Confidence            3669999999998754432  333      67788888874    22222322    2233467666654 777765433


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                      .       +-..||.-.+.+....    .+.+-            +   +..+.....+.=|...++++....+....++
T Consensus       197 ~-------rp~kv~~h~~gt~~~~----d~lvy------------e---E~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~  250 (682)
T COG1770         197 H-------RPDKVWRHRLGTPGSS----DELVY------------E---EKDDRFFLSVGRSRSEAYIVISLGSHITSEV  250 (682)
T ss_pred             C-------CcceEEEEecCCCCCc----ceEEE------------E---cCCCcEEEEeeeccCCceEEEEcCCCcceeE
Confidence            2       2257777777662110    11111            1   1444555566666677766666555666778


Q ss_pred             EEEECCCCc--eeEEEEEeCCCcccccCCceeEccC--CCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463          274 TRCSINEGT--CDVVFSRDLDRGWFEPFDHLRFSSD--GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  349 (790)
Q Consensus       274 ~~~~~~~g~--~~~l~~~~~~~~~~~~~~~~~~spD--g~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~  349 (790)
                      ++++.+...  .+.+...+.         ...++.|  |..+++..+    ..|.     ...|+...+...+  .  .-
T Consensus       251 ~ll~a~~p~~~p~vv~pr~~---------g~eY~~eh~~d~f~i~sN----~~gk-----nf~l~~ap~~~~~--~--~w  308 (682)
T COG1770         251 RLLDADDPEAEPKVVLPREN---------GVEYSVEHGGDRFYILSN----ADGK-----NFKLVRAPVSADK--S--NW  308 (682)
T ss_pred             EEEecCCCCCceEEEEEcCC---------CcEEeeeecCcEEEEEec----CCCc-----ceEEEEccCCCCh--h--cC
Confidence            888887643  344444321         2223222  555554333    4452     4567766652111  0  01


Q ss_pred             ccccCCCeEEeEEEeeecCCCEEEEEEcC-CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEE--EEEEecCCcE
Q psy463          350 VPLTRGRFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYS--GATFSTNVSY  426 (790)
Q Consensus       350 ~~lt~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~--~~~~s~dg~~  426 (790)
                      +.+..+...+. .-.++-=.+.|+..-.. +-   ..|+..+...  ++...|...      ......  +.+--++...
T Consensus       309 ~~~I~h~~~~~-l~~~~~f~~~lVl~eR~~gl---p~v~v~~~~~--~~~~~i~f~------~~ay~~~l~~~~e~~s~~  376 (682)
T COG1770         309 RELIPHREDVR-LEGVDLFADHLVLLERQEGL---PRVVVRDRKT--GEERGIAFD------DEAYSAGLSGNPEFDSDR  376 (682)
T ss_pred             eeeeccCCCce-eeeeeeeccEEEEEecccCC---ceEEEEecCC--CceeeEEec------chhhhccccCCCCCCCcc
Confidence            12222222111 12233234556655544 33   5677777654  444444432      111111  1222345678


Q ss_pred             EEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCC--ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccE
Q psy463          427 YVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLP--SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPL  503 (790)
Q Consensus       427 ~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~  503 (790)
                      |-+++++.+ |.+++=+|+.+++.+.+-..+-    ..++...  ..+.+..+..||.+|+..++.-++..  ..++.|+
T Consensus       377 lR~~ysS~ttP~~~~~~dm~t~er~~LkqqeV----~~g~dp~~Y~s~riwa~a~dgv~VPVSLvyrkd~~--~~g~~p~  450 (682)
T COG1770         377 LRYSYSSMTTPATLFDYDMATGERTLLKQQEV----PGGFDPEDYVSRRIWATADDGVQVPVSLVYRKDTK--LDGSAPL  450 (682)
T ss_pred             EEEEeecccccceeEEeeccCCcEEEEEeccC----CCCCChhHeEEEEEEEEcCCCcEeeEEEEEecccC--CCCCCcE
Confidence            889998888 8889999999987776644331    1224433  35677888889999999888776654  5677899


Q ss_pred             EEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCC
Q psy463          504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDK  583 (790)
Q Consensus       504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~  583 (790)
                      +++.+|.-+... ...|+.. +..++ ++|++......||.+.-|+.|...+........+.|++++.++|.+ .++.+.
T Consensus       451 lLygYGaYG~s~-~p~Fs~~-~lSLl-DRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~-~g~~~~  526 (682)
T COG1770         451 LLYGYGAYGISM-DPSFSIA-RLSLL-DRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVK-EGYTSP  526 (682)
T ss_pred             EEEEeccccccC-CcCcccc-eeeee-cCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHH-cCcCCc
Confidence            999999877633 4444421 22233 5899999999999999999998887766667889999999999998 899999


Q ss_pred             CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc--c-------cccchhhhcCCCCccCchhhhhhccccch
Q psy463          584 TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY--Y-------DTIYSERYMGLPTFEDNLEGYKIAALNNK  654 (790)
Q Consensus       584 ~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~--~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  654 (790)
                      ++|+++|.|.||.+...++...|+ .|+++|+..|+.|...  .       ...|.|  +|.|...+.-.-+...+|...
T Consensus       527 ~~i~a~GGSAGGmLmGav~N~~P~-lf~~iiA~VPFVDvltTMlD~slPLT~~E~~E--WGNP~d~e~y~yikSYSPYdN  603 (682)
T COG1770         527 DRIVAIGGSAGGMLMGAVANMAPD-LFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDE--WGNPLDPEYYDYIKSYSPYDN  603 (682)
T ss_pred             cceEEeccCchhHHHHHHHhhChh-hhhheeecCCccchhhhhcCCCCCCCccchhh--hCCcCCHHHHHHHhhcCchhc
Confidence            999999999999999999998885 9999999999887542  1       123333  266632222223345677777


Q ss_pred             hhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc
Q psy463          655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM  692 (790)
Q Consensus       655 ~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~  692 (790)
                      +..-.-+++|+..|..|++|..-+..+++..|......
T Consensus       604 V~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td  641 (682)
T COG1770         604 VEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTD  641 (682)
T ss_pred             cccCCCCceEEEccccCCccccchHHHHHHHHhhcccC
Confidence            76655579999999999999999999999999876554

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.87  E-value=2.3e-20  Score=202.48  Aligned_cols=226  Identities=10%  Similarity=0.121  Sum_probs=157.9

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      .|+|||||++|+|.+...+          ..+||++++.++.      ..+++..+..+ .-..|+|+++. ++|.....
T Consensus       206 ~p~wSpDG~~lay~s~~~g----------~~~i~~~dl~~g~------~~~l~~~~g~~-~~~~~SPDG~~-la~~~~~~  267 (435)
T PRK05137        206 TPRFSPNRQEITYMSYANG----------RPRVYLLDLETGQ------RELVGNFPGMT-FAPRFSPDGRK-VVMSLSQG  267 (435)
T ss_pred             eeEECCCCCEEEEEEecCC----------CCEEEEEECCCCc------EEEeecCCCcc-cCcEECCCCCE-EEEEEecC
Confidence            5799999999999885433          1389999998874      45566544322 23578887765 55554321


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                               ...+||++|+++++      ..+|+                 ........+.|||||+.+++.....+..+
T Consensus       268 ---------g~~~Iy~~d~~~~~------~~~Lt-----------------~~~~~~~~~~~spDG~~i~f~s~~~g~~~  315 (435)
T PRK05137        268 ---------GNTDIYTMDLRSGT------TTRLT-----------------DSPAIDTSPSYSPDGSQIVFESDRSGSPQ  315 (435)
T ss_pred             ---------CCceEEEEECCCCc------eEEcc-----------------CCCCccCceeEcCCCCEEEEEECCCCCCe
Confidence                     12689999999887      45666                 44445667999999995555544444568


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      ||++++++++.++++...+      ....+.|||||+.|+|...    ..+      ..+|++++++++.      .+.+
T Consensus       316 Iy~~d~~g~~~~~lt~~~~------~~~~~~~SpdG~~ia~~~~----~~~------~~~i~~~d~~~~~------~~~l  373 (435)
T PRK05137        316 LYVMNADGSNPRRISFGGG------RYSTPVWSPRGDLIAFTKQ----GGG------QFSIGVMKPDGSG------ERIL  373 (435)
T ss_pred             EEEEECCCCCeEEeecCCC------cccCeEECCCCCEEEEEEc----CCC------ceEEEEEECCCCc------eEec
Confidence            9999999998888876422      1346999999999997654    334      4589999998776      6677


Q ss_pred             cCCCeEEeEEEeeecCCCEEEEEEcCCCC-ceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463          353 TRGRFTVTEILAWDEKENNVYFLSTQGSP-IVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST  422 (790)
Q Consensus       353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~  422 (790)
                      +.+. ... .+.|+|||+.|+|.+..... ....||.+++++  +..+.|+.        .+....+.|||
T Consensus       374 t~~~-~~~-~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g--~~~~~l~~--------~~~~~~p~Wsp  432 (435)
T PRK05137        374 TSGF-LVE-GPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTG--RNEREVPT--------PGDASDPAWSP  432 (435)
T ss_pred             cCCC-CCC-CCeECCCCCEEEEEEccCCCCCcceEEEEECCC--CceEEccC--------CCCccCcccCC
Confidence            7643 333 48999999999999876321 125899999987  55555543        22355677876

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.87  E-value=2.7e-20  Score=200.38  Aligned_cols=226  Identities=17%  Similarity=0.133  Sum_probs=158.5

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+|||||++|+|.+...+          ..+||++++.+++      ..+++..+.... -..|+|+++. ++|....
T Consensus       202 ~~p~wSPDG~~la~~s~~~g----------~~~i~i~dl~~G~------~~~l~~~~~~~~-~~~~SPDG~~-La~~~~~  263 (429)
T PRK03629        202 MSPAWSPDGSKLAYVTFESG----------RSALVIQTLANGA------VRQVASFPRHNG-APAFSPDGSK-LAFALSK  263 (429)
T ss_pred             eeeEEcCCCCEEEEEEecCC----------CcEEEEEECCCCC------eEEccCCCCCcC-CeEECCCCCE-EEEEEcC
Confidence            35899999999999875332          2389999998874      445554433222 2578888775 6665432


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA  271 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~  271 (790)
                      ..         ..+||++|+++++      ..+++                 ........+.|||||+.++++....+..
T Consensus       264 ~g---------~~~I~~~d~~tg~------~~~lt-----------------~~~~~~~~~~wSPDG~~I~f~s~~~g~~  311 (429)
T PRK03629        264 TG---------SLNLYVMDLASGQ------IRQVT-----------------DGRSNNTEPTWFPDSQNLAYTSDQAGRP  311 (429)
T ss_pred             CC---------CcEEEEEECCCCC------EEEcc-----------------CCCCCcCceEECCCCCEEEEEeCCCCCc
Confidence            11         2579999999886      45666                 3344567899999999555554434456


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      +||.+++++++.++++....      ....+.|||||+.|+|...    ..+      ..+|+++|+++++      .+.
T Consensus       312 ~Iy~~d~~~g~~~~lt~~~~------~~~~~~~SpDG~~Ia~~~~----~~g------~~~I~~~dl~~g~------~~~  369 (429)
T PRK03629        312 QVYKVNINGGAPQRITWEGS------QNQDADVSSDGKFMVMVSS----NGG------QQHIAKQDLATGG------VQV  369 (429)
T ss_pred             eEEEEECCCCCeEEeecCCC------CccCEEECCCCCEEEEEEc----cCC------CceEEEEECCCCC------eEE
Confidence            89999999998887765321      1347999999999997654    344      4589999999887      788


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST  422 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~  422 (790)
                      |+... ... .+.|+|||+.|+|.+.++.  ...|+.+++++  +..+.|+.       ..+....++|||
T Consensus       370 Lt~~~-~~~-~p~~SpDG~~i~~~s~~~~--~~~l~~~~~~G--~~~~~l~~-------~~~~~~~p~Wsp  427 (429)
T PRK03629        370 LTDTF-LDE-TPSIAPNGTMVIYSSSQGM--GSVLNLVSTDG--RFKARLPA-------TDGQVKFPAWSP  427 (429)
T ss_pred             eCCCC-CCC-CceECCCCCEEEEEEcCCC--ceEEEEEECCC--CCeEECcc-------CCCCcCCcccCC
Confidence            88543 222 3899999999999998743  26799999987  55555543       234456678876

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.86  E-value=5e-20  Score=198.62  Aligned_cols=226  Identities=14%  Similarity=0.138  Sum_probs=156.9

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+|||||++|+|.+....          ..+||++++.+++      ..+++..+.. .....|+|+++. ++|....
T Consensus       199 ~~p~wSPDG~~la~~s~~~~----------~~~I~~~dl~~g~------~~~l~~~~g~-~~~~~~SPDG~~-la~~~~~  260 (427)
T PRK02889        199 ISPAWSPDGTKLAYVSFESK----------KPVVYVHDLATGR------RRVVANFKGS-NSAPAWSPDGRT-LAVALSR  260 (427)
T ss_pred             ccceEcCCCCEEEEEEccCC----------CcEEEEEECCCCC------EEEeecCCCC-ccceEECCCCCE-EEEEEcc
Confidence            35799999999999875432          2389999998874      4455544322 224678888775 5554432


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA  271 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~  271 (790)
                      .         ...+||.+++++++      ..+++                 ........+.|||||+.++++....+..
T Consensus       261 ~---------g~~~Iy~~d~~~~~------~~~lt-----------------~~~~~~~~~~wSpDG~~l~f~s~~~g~~  308 (427)
T PRK02889        261 D---------GNSQIYTVNADGSG------LRRLT-----------------QSSGIDTEPFFSPDGRSIYFTSDRGGAP  308 (427)
T ss_pred             C---------CCceEEEEECCCCC------cEECC-----------------CCCCCCcCeEEcCCCCEEEEEecCCCCc
Confidence            1         12699999998876      45555                 3334456789999999555554434456


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      +||.++++++..+.++....   +   ...+.|||||++|+|...    ..+      ..+|+++|+++++      .++
T Consensus       309 ~Iy~~~~~~g~~~~lt~~g~---~---~~~~~~SpDG~~Ia~~s~----~~g------~~~I~v~d~~~g~------~~~  366 (427)
T PRK02889        309 QIYRMPASGGAAQRVTFTGS---Y---NTSPRISPDGKLLAYISR----VGG------AFKLYVQDLATGQ------VTA  366 (427)
T ss_pred             EEEEEECCCCceEEEecCCC---C---cCceEECCCCCEEEEEEc----cCC------cEEEEEEECCCCC------eEE
Confidence            89999999888877764321   1   336999999999996554    334      4589999999887      778


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST  422 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~  422 (790)
                      |+.+...  ..+.|+|||+.|+|.+..+.  ...||.+++++  ...+.++.       ..+....++|||
T Consensus       367 lt~~~~~--~~p~~spdg~~l~~~~~~~g--~~~l~~~~~~g--~~~~~l~~-------~~g~~~~p~wsp  424 (427)
T PRK02889        367 LTDTTRD--ESPSFAPNGRYILYATQQGG--RSVLAAVSSDG--RIKQRLSV-------QGGDVREPSWGP  424 (427)
T ss_pred             ccCCCCc--cCceECCCCCEEEEEEecCC--CEEEEEEECCC--CceEEeec-------CCCCCCCCccCC
Confidence            8865432  34899999999999998743  27899999866  44444442       234556677876

>KOG1455|consensus

Probab=99.86  E-value=1.1e-20  Score=179.20  Aligned_cols=279  Identities=16%  Similarity=0.169  Sum_probs=177.8

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      ..-.++..+|..+....+.|..    ..+...+|+++||.++..    .|.+.-....++..||.|+.+|++|+|.+..-
T Consensus        28 ~~~~~~n~rG~~lft~~W~p~~----~~~pr~lv~~~HG~g~~~----s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl   99 (313)
T KOG1455|consen   28 SESFFTNPRGAKLFTQSWLPLS----GTEPRGLVFLCHGYGEHS----SWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL   99 (313)
T ss_pred             eeeeEEcCCCCEeEEEecccCC----CCCCceEEEEEcCCcccc----hhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC
Confidence            3446677799999999999975    346677999999987752    22333233444558999999999998875532


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS  630 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~  630 (790)
                         ..+-.--...++|+...++.++. ......-..+++||||||.+++.++.++|. .+.++++++|+.......    
T Consensus       100 ---~~yi~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~-~w~G~ilvaPmc~i~~~~----  170 (313)
T KOG1455|consen  100 ---HAYVPSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALKDPN-FWDGAILVAPMCKISEDT----  170 (313)
T ss_pred             ---cccCCcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhhCCc-ccccceeeecccccCCcc----
Confidence               11111111347777777777666 333334589999999999999999999885 999999999986543210    


Q ss_pred             hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463          631 ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG  710 (790)
Q Consensus       631 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  710 (790)
                                  .........+..+.++.. ...++... | ...........+.+...++    ..|.+.|......+.
T Consensus       171 ------------kp~p~v~~~l~~l~~liP-~wk~vp~~-d-~~~~~~kdp~~r~~~~~np----l~y~g~pRl~T~~El  231 (313)
T KOG1455|consen  171 ------------KPHPPVISILTLLSKLIP-TWKIVPTK-D-IIDVAFKDPEKRKILRSDP----LCYTGKPRLKTAYEL  231 (313)
T ss_pred             ------------CCCcHHHHHHHHHHHhCC-ceeecCCc-c-ccccccCCHHHHHHhhcCC----ceecCCccHHHHHHH
Confidence                        000111111111222210 11111111 1 0000011111111222222    244555544444444


Q ss_pred             hhhhh-hhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----cchHHHHHHHHH
Q psy463          711 YKIAA-LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----VRPHFYHTLERF  784 (790)
Q Consensus       711 ~~~~~-~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----~~~~~~~~i~~f  784 (790)
                      .+... +..++.++ ..|+|++||+.|.++.+..+++||+......+  ++.+|||+.|.+..     +.+.++..|.+|
T Consensus       232 Lr~~~~le~~l~~v-tvPflilHG~dD~VTDp~~Sk~Lye~A~S~DK--TlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~W  308 (313)
T KOG1455|consen  232 LRVTADLEKNLNEV-TVPFLILHGTDDKVTDPKVSKELYEKASSSDK--TLKLYPGMWHSLLSGEPDENVEIVFGDIISW  308 (313)
T ss_pred             HHHHHHHHHhcccc-cccEEEEecCCCcccCcHHHHHHHHhccCCCC--ceeccccHHHHhhcCCCchhHHHHHHHHHHH
Confidence            33332 34667788 99999999999999999999999999888755  78899999999884     677899999999


Q ss_pred             HHHh
Q psy463          785 LDSC  788 (790)
Q Consensus       785 l~~~  788 (790)
                      |+++
T Consensus       309 l~~r  312 (313)
T KOG1455|consen  309 LDER  312 (313)
T ss_pred             HHhc
Confidence            9875

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.86  E-value=6.8e-20  Score=198.72  Aligned_cols=252  Identities=14%  Similarity=0.178  Sum_probs=180.6

Q ss_pred             ceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCc
Q psy463          121 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPV  200 (790)
Q Consensus       121 ~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (790)
                      .+|+|++...+....      ..+||++|.++..      .+++|.+...+. -..|.|+++. ++|.+....       
T Consensus       166 ~~iafv~~~~~~~~~------~~~l~~~d~dg~~------~~~lt~~~~~v~-~p~wSpDG~~-lay~s~~~g-------  224 (435)
T PRK05137        166 TRIVYVAESGPKNKR------IKRLAIMDQDGAN------VRYLTDGSSLVL-TPRFSPNRQE-ITYMSYANG-------  224 (435)
T ss_pred             CeEEEEEeeCCCCCc------ceEEEEECCCCCC------cEEEecCCCCeE-eeEECCCCCE-EEEEEecCC-------
Confidence            589998764332111      3489999997764      577887765544 3578887764 777764321       


Q ss_pred             cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCC
Q psy463          201 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINE  280 (790)
Q Consensus       201 ~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~  280 (790)
                        ..+||++++++|+      ..+++                 ...+....+.|||||+.++++....+..+||++++++
T Consensus       225 --~~~i~~~dl~~g~------~~~l~-----------------~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~  279 (435)
T PRK05137        225 --RPRVYLLDLETGQ------RELVG-----------------NFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRS  279 (435)
T ss_pred             --CCEEEEEECCCCc------EEEee-----------------cCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCC
Confidence              2699999999887      44454                 3444556889999999555443333456799999999


Q ss_pred             CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe
Q psy463          281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT  360 (790)
Q Consensus       281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~  360 (790)
                      ++.++|+....      ....+.|||||++|+|...    ..|      ..+||++|+++++      .++|+.+.....
T Consensus       280 ~~~~~Lt~~~~------~~~~~~~spDG~~i~f~s~----~~g------~~~Iy~~d~~g~~------~~~lt~~~~~~~  337 (435)
T PRK05137        280 GTTTRLTDSPA------IDTSPSYSPDGSQIVFESD----RSG------SPQLYVMNADGSN------PRRISFGGGRYS  337 (435)
T ss_pred             CceEEccCCCC------ccCceeEcCCCCEEEEEEC----CCC------CCeEEEEECCCCC------eEEeecCCCccc
Confidence            99888876432      1447999999999996543    556      5689999999887      888886543333


Q ss_pred             EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCC---C
Q psy463          361 EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGI---P  437 (790)
Q Consensus       361 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~---~  437 (790)
                      . +.|+|||+.|+|.+....  ..+|+.+++++  +..+.++..        .....++|||||+.|+|.....+.   .
T Consensus       338 ~-~~~SpdG~~ia~~~~~~~--~~~i~~~d~~~--~~~~~lt~~--------~~~~~p~~spDG~~i~~~~~~~~~~~~~  404 (435)
T PRK05137        338 T-PVWSPRGDLIAFTKQGGG--QFSIGVMKPDG--SGERILTSG--------FLVEGPTWAPNGRVIMFFRQTPGSGGAP  404 (435)
T ss_pred             C-eEECCCCCEEEEEEcCCC--ceEEEEEECCC--CceEeccCC--------CCCCCCeECCCCCEEEEEEccCCCCCcc
Confidence            3 789999999999886522  27899999876  455555542        245678999999999998765553   6


Q ss_pred             eEEEEecCCCeEEEec
Q psy463          438 EIMLFDKTGQRLLYWD  453 (790)
Q Consensus       438 ~i~~~~~~~~~~~~l~  453 (790)
                      .|+++++++++.+.+.
T Consensus       405 ~L~~~dl~g~~~~~l~  420 (435)
T PRK05137        405 KLYTVDLTGRNEREVP  420 (435)
T ss_pred             eEEEEECCCCceEEcc
Confidence            8999999887666554

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.85  E-value=1.4e-19  Score=195.59  Aligned_cols=226  Identities=14%  Similarity=0.151  Sum_probs=157.8

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+|||||++|+|.+...+          ..+||++++.+++      ..+++..+... .-..|+|+++. ++|....
T Consensus       221 ~~p~wSPDG~~La~~s~~~g----------~~~L~~~dl~tg~------~~~lt~~~g~~-~~~~wSPDG~~-La~~~~~  282 (448)
T PRK04792        221 MSPAWSPDGRKLAYVSFENR----------KAEIFVQDIYTQV------REKVTSFPGIN-GAPRFSPDGKK-LALVLSK  282 (448)
T ss_pred             cCceECCCCCEEEEEEecCC----------CcEEEEEECCCCC------eEEecCCCCCc-CCeeECCCCCE-EEEEEeC
Confidence            46899999999999875432          2389999998874      34555443221 23578888775 5555432


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA  271 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~  271 (790)
                      .         ...+||++++++++      ..+++                 ........+.|||||+.++++....+..
T Consensus       283 ~---------g~~~Iy~~dl~tg~------~~~lt-----------------~~~~~~~~p~wSpDG~~I~f~s~~~g~~  330 (448)
T PRK04792        283 D---------GQPEIYVVDIATKA------LTRIT-----------------RHRAIDTEPSWHPDGKSLIFTSERGGKP  330 (448)
T ss_pred             C---------CCeEEEEEECCCCC------eEECc-----------------cCCCCccceEECCCCCEEEEEECCCCCc
Confidence            1         12689999999887      45555                 3334456799999999555554434457


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      +||++++++++.+.|+...   .+   ...+.|||||+.|+|...    ..+      ..+|+++|+++++      .+.
T Consensus       331 ~Iy~~dl~~g~~~~Lt~~g---~~---~~~~~~SpDG~~l~~~~~----~~g------~~~I~~~dl~~g~------~~~  388 (448)
T PRK04792        331 QIYRVNLASGKVSRLTFEG---EQ---NLGGSITPDGRSMIMVNR----TNG------KFNIARQDLETGA------MQV  388 (448)
T ss_pred             eEEEEECCCCCEEEEecCC---CC---CcCeeECCCCCEEEEEEe----cCC------ceEEEEEECCCCC------eEE
Confidence            8999999999888886432   11   236899999999997544    344      4589999999887      778


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST  422 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~  422 (790)
                      |+......  .+.|+|||+.|+|.+..+.  ...||.++.++  +..+.++.       ..+....++|||
T Consensus       389 lt~~~~d~--~ps~spdG~~I~~~~~~~g--~~~l~~~~~~G--~~~~~l~~-------~~g~~~~p~Wsp  446 (448)
T PRK04792        389 LTSTRLDE--SPSVAPNGTMVIYSTTYQG--KQVLAAVSIDG--RFKARLPA-------GQGEVKSPAWSP  446 (448)
T ss_pred             ccCCCCCC--CceECCCCCEEEEEEecCC--ceEEEEEECCC--CceEECcC-------CCCCcCCCccCC
Confidence            88654322  3789999999999987743  26799999876  44555543       234456677876

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.85  E-value=1.8e-19  Score=193.89  Aligned_cols=251  Identities=12%  Similarity=0.099  Sum_probs=179.9

Q ss_pred             ceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCc
Q psy463          121 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPV  200 (790)
Q Consensus       121 ~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (790)
                      ++|+|+.....+ .  |    ..+||++|.++..      ..++|.+...+. -..|+|+++. ++|++....       
T Consensus       164 ~riayv~~~~~~-~--~----~~~l~~~d~dg~~------~~~lt~~~~~~~-~p~wSPDG~~-la~~s~~~g-------  221 (429)
T PRK03629        164 TRIAYVVQTNGG-Q--F----PYELRVSDYDGYN------QFVVHRSPQPLM-SPAWSPDGSK-LAYVTFESG-------  221 (429)
T ss_pred             CeEEEEEeeCCC-C--c----ceeEEEEcCCCCC------CEEeecCCCcee-eeEEcCCCCE-EEEEEecCC-------
Confidence            788988764332 1  1    3489999998764      567787764433 4588888765 666653211       


Q ss_pred             cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCC
Q psy463          201 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINE  280 (790)
Q Consensus       201 ~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~  280 (790)
                        ...||++++++|+      .++++                 ........+.|||||+.++++....+..+||++|+++
T Consensus       222 --~~~i~i~dl~~G~------~~~l~-----------------~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~t  276 (429)
T PRK03629        222 --RSALVIQTLANGA------VRQVA-----------------SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS  276 (429)
T ss_pred             --CcEEEEEECCCCC------eEEcc-----------------CCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence              2689999999887      44444                 3333445789999999666654434455699999999


Q ss_pred             CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe
Q psy463          281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT  360 (790)
Q Consensus       281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~  360 (790)
                      ++.++++....      ....+.|||||+.|+|...    ..|      ..+||++++++++      .++|+.......
T Consensus       277 g~~~~lt~~~~------~~~~~~wSPDG~~I~f~s~----~~g------~~~Iy~~d~~~g~------~~~lt~~~~~~~  334 (429)
T PRK03629        277 GQIRQVTDGRS------NNTEPTWFPDSQNLAYTSD----QAG------RPQVYKVNINGGA------PQRITWEGSQNQ  334 (429)
T ss_pred             CCEEEccCCCC------CcCceEECCCCCEEEEEeC----CCC------CceEEEEECCCCC------eEEeecCCCCcc
Confidence            99888875421      1458999999999996543    556      5699999999887      777775432222


Q ss_pred             EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEE
Q psy463          361 EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIM  440 (790)
Q Consensus       361 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~  440 (790)
                       .+.|+|||+.|+|.+..+.  ..+|+.+++++  ++.+.|+..        .....++|||||+++++.....+...++
T Consensus       335 -~~~~SpDG~~Ia~~~~~~g--~~~I~~~dl~~--g~~~~Lt~~--------~~~~~p~~SpDG~~i~~~s~~~~~~~l~  401 (429)
T PRK03629        335 -DADVSSDGKFMVMVSSNGG--QQHIAKQDLAT--GGVQVLTDT--------FLDETPSIAPNGTMVIYSSSQGMGSVLN  401 (429)
T ss_pred             -CEEECCCCCEEEEEEccCC--CceEEEEECCC--CCeEEeCCC--------CCCCCceECCCCCEEEEEEcCCCceEEE
Confidence             3789999999999887632  26899999987  677777742        2234689999999999988765566789


Q ss_pred             EEecCCCeEEEec
Q psy463          441 LFDKTGQRLLYWD  453 (790)
Q Consensus       441 ~~~~~~~~~~~l~  453 (790)
                      +++++++..+.+.
T Consensus       402 ~~~~~G~~~~~l~  414 (429)
T PRK03629        402 LVSTDGRFKARLP  414 (429)
T ss_pred             EEECCCCCeEECc
Confidence            9999887666553

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.85  E-value=1.8e-19  Score=195.06  Aligned_cols=226  Identities=15%  Similarity=0.195  Sum_probs=157.4

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+|||||++|+|.+....          ..+||++++.+++      ..+++..+.. ..-..|+++++. ++|....
T Consensus       207 ~~p~wSpDg~~la~~s~~~~----------~~~l~~~dl~~g~------~~~l~~~~g~-~~~~~~SpDG~~-l~~~~s~  268 (433)
T PRK04922        207 LSPAWSPDGKKLAYVSFERG----------RSAIYVQDLATGQ------RELVASFRGI-NGAPSFSPDGRR-LALTLSR  268 (433)
T ss_pred             ccccCCCCCCEEEEEecCCC----------CcEEEEEECCCCC------EEEeccCCCC-ccCceECCCCCE-EEEEEeC
Confidence            35799999999999875332          2389999998874      4455544322 223578888775 5554432


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA  271 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~  271 (790)
                      ..         ..+||++++++++      ..+++                 ........+.|||||+.++++....+..
T Consensus       269 ~g---------~~~Iy~~d~~~g~------~~~lt-----------------~~~~~~~~~~~spDG~~l~f~sd~~g~~  316 (433)
T PRK04922        269 DG---------NPEIYVMDLGSRQ------LTRLT-----------------NHFGIDTEPTWAPDGKSIYFTSDRGGRP  316 (433)
T ss_pred             CC---------CceEEEEECCCCC------eEECc-----------------cCCCCccceEECCCCCEEEEEECCCCCc
Confidence            11         2689999999886      44555                 3333446789999999555554333456


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      +||.+++++++.++++....   +   ...+.|||||+.|+|...    ..+      ..+|+++|+.+++      .+.
T Consensus       317 ~iy~~dl~~g~~~~lt~~g~---~---~~~~~~SpDG~~Ia~~~~----~~~------~~~I~v~d~~~g~------~~~  374 (433)
T PRK04922        317 QIYRVAASGGSAERLTFQGN---Y---NARASVSPDGKKIAMVHG----SGG------QYRIAVMDLSTGS------VRT  374 (433)
T ss_pred             eEEEEECCCCCeEEeecCCC---C---ccCEEECCCCCEEEEEEC----CCC------ceeEEEEECCCCC------eEE
Confidence            79999999998888874321   1   347999999999997654    334      4589999998887      788


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST  422 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~  422 (790)
                      |+.+... . .+.|+|||+.|+|.+..+.  ...||.+++++  +..+.|+.       ..+....++|||
T Consensus       375 Lt~~~~~-~-~p~~spdG~~i~~~s~~~g--~~~L~~~~~~g--~~~~~l~~-------~~g~~~~p~wsp  432 (433)
T PRK04922        375 LTPGSLD-E-SPSFAPNGSMVLYATREGG--RGVLAAVSTDG--RVRQRLVS-------ADGEVREPAWSP  432 (433)
T ss_pred             CCCCCCC-C-CceECCCCCEEEEEEecCC--ceEEEEEECCC--CceEEccc-------CCCCCCCCccCC
Confidence            8876532 2 3799999999999988732  27899999977  55566654       233455677776

>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]

Probab=99.85  E-value=1.2e-19  Score=186.39  Aligned_cols=291  Identities=19%  Similarity=0.185  Sum_probs=221.0

Q ss_pred             EEecCCcEEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCC--CCceEEEEEEcCCCcEEEEEEEeCCCCCC
Q psy463          419 TFSTNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNIT--LPSVEYMSVPIQPNMEAQVKLFLPPGIDT  495 (790)
Q Consensus       419 ~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~dg~~i~~~~~~P~~~~~  495 (790)
                      .-+.+|+-+.+...+-. |+.+++.++.+.++..+...+      ..++  .-.++....++.||++|+++++. ++.+ 
T Consensus       346 ~~~~~g~ev~l~~t~F~tP~~~~r~~~~~~eLe~ik~~p------~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~~-  417 (648)
T COG1505         346 SADKDGDEVFLAFTSFTTPSTLYRLDLFGGELEVIREQP------VQFDADNYEVEQFFATSKDGTRIPYFIVR-KGAK-  417 (648)
T ss_pred             cCCCCCcEEEEEeecccCCCceEEEecCCceehhhhhcc------CCcCccCceEEEEEEEcCCCccccEEEEe-cCCc-
Confidence            44556777777777766 889999999988777665433      2222  23467777889999999999998 6654 


Q ss_pred             CCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHH
Q psy463          496 SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQ  575 (790)
Q Consensus       496 ~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~  575 (790)
                       .. +.|++|+.|||-.... ...|+... ...+. +|.+.+..|.||.|.+|..|+.+..+...+..++|..++.+.|+
T Consensus       418 -~d-~~pTll~aYGGF~vsl-tP~fs~~~-~~WLe-rGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi  492 (648)
T COG1505         418 -KD-ENPTLLYAYGGFNISL-TPRFSGSR-KLWLE-RGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLI  492 (648)
T ss_pred             -CC-CCceEEEecccccccc-CCccchhh-HHHHh-cCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHH
Confidence             34 7899999999877643 66676654 44454 89999999999999999999999888877888999999999999


Q ss_pred             HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc-----chhhhcCCCCccCchhhhhhcc
Q psy463          576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI-----YSERYMGLPTFEDNLEGYKIAA  650 (790)
Q Consensus       576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~  650 (790)
                      + .++..+++++|.|.|-||.++..++.++|+ .|.++++..|+.|+..|...     |...| |.|.   ++...    
T Consensus       493 ~-rgitspe~lgi~GgSNGGLLvg~alTQrPe-lfgA~v~evPllDMlRYh~l~aG~sW~~EY-G~Pd---~P~d~----  562 (648)
T COG1505         493 K-RGITSPEKLGIQGGSNGGLLVGAALTQRPE-LFGAAVCEVPLLDMLRYHLLTAGSSWIAEY-GNPD---DPEDR----  562 (648)
T ss_pred             H-hCCCCHHHhhhccCCCCceEEEeeeccChh-hhCceeeccchhhhhhhcccccchhhHhhc-CCCC---CHHHH----
Confidence            8 888899999999999999999999999996 99999999999999877432     22222 3331   11100    


Q ss_pred             ccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhc-cCCccEE
Q psy463          651 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDR-IRDKQYL  729 (790)
Q Consensus       651 ~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~P~L  729 (790)
                                                       ..|                         .+.||+.+++. .+-.|+|
T Consensus       563 ---------------------------------~~l-------------------------~~YSPy~nl~~g~kYP~~L  584 (648)
T COG1505         563 ---------------------------------AFL-------------------------LAYSPYHNLKPGQKYPPTL  584 (648)
T ss_pred             ---------------------------------HHH-------------------------HhcCchhcCCccccCCCeE
Confidence                                             011                         11222233332 2248999


Q ss_pred             EEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cc--hHHHHHHHHHHHHhhC
Q psy463          730 LVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VR--PHFYHTLERFLDSCFA  790 (790)
Q Consensus       730 ii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~--~~~~~~i~~fl~~~l~  790 (790)
                      |-.+++|.+|+|.++..++.+|++.+.++-+.+--++||+-.. ..  -.....+..||.+.|+
T Consensus       585 ITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L~  648 (648)
T COG1505         585 ITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTLG  648 (648)
T ss_pred             EEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999999999999999988877777789998876 22  2344667788887764

>PRK13604 luxD acyl transferase; Provisional

Probab=99.84  E-value=1.5e-19  Score=178.05  Aligned_cols=235  Identities=12%  Similarity=0.050  Sum_probs=150.0

Q ss_pred             EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCC-CCChhhh
Q psy463          473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS-ALKGNTL  551 (790)
Q Consensus       473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~-~~~g~~~  551 (790)
                      ..+.+.||.++.||+..|.+.   ...+.++||+.||..+..   .. ...++ ..++++||+|+.+|+||+ |.++.++
T Consensus        12 ~~~~~~dG~~L~Gwl~~P~~~---~~~~~~~vIi~HGf~~~~---~~-~~~~A-~~La~~G~~vLrfD~rg~~GeS~G~~   83 (307)
T PRK13604         12 HVICLENGQSIRVWETLPKEN---SPKKNNTILIASGFARRM---DH-FAGLA-EYLSSNGFHVIRYDSLHHVGLSSGTI   83 (307)
T ss_pred             heEEcCCCCEEEEEEEcCccc---CCCCCCEEEEeCCCCCCh---HH-HHHHH-HHHHHCCCEEEEecCCCCCCCCCCcc
Confidence            456777999999999999742   245678999999988753   11 22333 445569999999999886 6665554


Q ss_pred             HhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchh
Q psy463          552 KYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSE  631 (790)
Q Consensus       552 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~  631 (790)
                      .....    .....|+.++++|+.+ ..   ..+|+|+||||||.++..+|.. +  .++++|+.+|..++..+...   
T Consensus        84 ~~~t~----s~g~~Dl~aaid~lk~-~~---~~~I~LiG~SmGgava~~~A~~-~--~v~~lI~~sp~~~l~d~l~~---  149 (307)
T PRK13604         84 DEFTM----SIGKNSLLTVVDWLNT-RG---INNLGLIAASLSARIAYEVINE-I--DLSFLITAVGVVNLRDTLER---  149 (307)
T ss_pred             ccCcc----cccHHHHHHHHHHHHh-cC---CCceEEEEECHHHHHHHHHhcC-C--CCCEEEEcCCcccHHHHHHH---
Confidence            32211    1237899999999987 32   4689999999999998777663 2  48889999999885422110   


Q ss_pred             hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh
Q psy463          632 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY  711 (790)
Q Consensus       632 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  711 (790)
                       .+..        .|...            |..-.....|..-..-....+++.+...++                   .
T Consensus       150 -~~~~--------~~~~~------------p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~-------------------~  189 (307)
T PRK13604        150 -ALGY--------DYLSL------------PIDELPEDLDFEGHNLGSEVFVTDCFKHGW-------------------D  189 (307)
T ss_pred             -hhhc--------ccccC------------cccccccccccccccccHHHHHHHHHhcCc-------------------c
Confidence             0000        00000            000000000000000000111111111111                   1


Q ss_pred             hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          712 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       712 ~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                      ...++.+.++++ +.|+|+|||+.|..||+++++.++++++..  +++++++||++|.+..
T Consensus       190 ~~~s~i~~~~~l-~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~--~kkl~~i~Ga~H~l~~  247 (307)
T PRK13604        190 TLDSTINKMKGL-DIPFIAFTANNDSWVKQSEVIDLLDSIRSE--QCKLYSLIGSSHDLGE  247 (307)
T ss_pred             ccccHHHHHhhc-CCCEEEEEcCCCCccCHHHHHHHHHHhccC--CcEEEEeCCCccccCc
Confidence            123344678888 899999999999999999999999987643  4699999999999985

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.84  E-value=7.8e-19  Score=191.06  Aligned_cols=253  Identities=13%  Similarity=0.137  Sum_probs=178.9

Q ss_pred             CCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCC
Q psy463          119 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGST  198 (790)
Q Consensus       119 dg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (790)
                      -.++|+|+........+.|      +||+.|.+++.      .++++.+...+ .-..|+|+++. ++|.+...      
T Consensus       161 f~~~ia~v~~~~~~~~~~~------~l~~~d~~g~~------~~~l~~~~~~~-~~p~wSpDG~~-la~~s~~~------  220 (430)
T PRK00178        161 FSTRILYVTAERFSVNTRY------TLQRSDYDGAR------AVTLLQSREPI-LSPRWSPDGKR-IAYVSFEQ------  220 (430)
T ss_pred             ceeeEEEEEeeCCCCCcce------EEEEECCCCCC------ceEEecCCCce-eeeeECCCCCE-EEEEEcCC------
Confidence            3467888876544333444      89999998764      56666654433 33478888765 77776431      


Q ss_pred             CccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEEC
Q psy463          199 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSI  278 (790)
Q Consensus       199 ~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~  278 (790)
                         ...+||++++++|+      .++++                 ...+....+.|||||+.++++....+..+||++|+
T Consensus       221 ---~~~~l~~~~l~~g~------~~~l~-----------------~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~  274 (430)
T PRK00178        221 ---KRPRIFVQNLDTGR------REQIT-----------------NFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDL  274 (430)
T ss_pred             ---CCCEEEEEECCCCC------EEEcc-----------------CCCCCcCCeEECCCCCEEEEEEccCCCceEEEEEC
Confidence               12689999999887      34444                 33344457999999996555443334567999999


Q ss_pred             CCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeE
Q psy463          279 NEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT  358 (790)
Q Consensus       279 ~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~  358 (790)
                      ++++.++|+....      ....+.|||||+.|+|..    ++.|      ..+||++++.+++      .++++.... 
T Consensus       275 ~~~~~~~lt~~~~------~~~~~~~spDg~~i~f~s----~~~g------~~~iy~~d~~~g~------~~~lt~~~~-  331 (430)
T PRK00178        275 ASRQLSRVTNHPA------IDTEPFWGKDGRTLYFTS----DRGG------KPQIYKVNVNGGR------AERVTFVGN-  331 (430)
T ss_pred             CCCCeEEcccCCC------CcCCeEECCCCCEEEEEE----CCCC------CceEEEEECCCCC------EEEeecCCC-
Confidence            9998888775332      245799999999999654    3566      5689999998887      777764321 


Q ss_pred             EeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCe
Q psy463          359 VTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPE  438 (790)
Q Consensus       359 ~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~  438 (790)
                      ....+.|+|||+.|+|.+....  ..+|+.+++++  ++.+.|+..        .....++|||||++++|+....+...
T Consensus       332 ~~~~~~~Spdg~~i~~~~~~~~--~~~l~~~dl~t--g~~~~lt~~--------~~~~~p~~spdg~~i~~~~~~~g~~~  399 (430)
T PRK00178        332 YNARPRLSADGKTLVMVHRQDG--NFHVAAQDLQR--GSVRILTDT--------SLDESPSVAPNGTMLIYATRQQGRGV  399 (430)
T ss_pred             CccceEECCCCCEEEEEEccCC--ceEEEEEECCC--CCEEEccCC--------CCCCCceECCCCCEEEEEEecCCceE
Confidence            1223789999999999987632  26899999987  677777752        12235799999999999987666778


Q ss_pred             EEEEecCCCeEEEe
Q psy463          439 IMLFDKTGQRLLYW  452 (790)
Q Consensus       439 i~~~~~~~~~~~~l  452 (790)
                      |++++++++..+.+
T Consensus       400 l~~~~~~g~~~~~l  413 (430)
T PRK00178        400 LMLVSINGRVRLPL  413 (430)
T ss_pred             EEEEECCCCceEEC
Confidence            99999887655544

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.84  E-value=5.7e-19  Score=191.21  Aligned_cols=252  Identities=10%  Similarity=0.079  Sum_probs=177.3

Q ss_pred             ceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCc
Q psy463          121 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPV  200 (790)
Q Consensus       121 ~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (790)
                      .+|+|+..........      .+||++|.++..      ..+||.+...+. -..|+|+++. ++|.+....       
T Consensus       168 ~~ia~v~~~~~~~~~~------~~l~i~D~~g~~------~~~lt~~~~~v~-~p~wSpDg~~-la~~s~~~~-------  226 (433)
T PRK04922        168 TRIAYVTVSGAGGAMR------YALQVADSDGYN------PQTILRSAEPIL-SPAWSPDGKK-LAYVSFERG-------  226 (433)
T ss_pred             ceEEEEEEeCCCCCce------EEEEEECCCCCC------ceEeecCCCccc-cccCCCCCCE-EEEEecCCC-------
Confidence            5788887543322222      379999987653      567877754433 3578887765 777654211       


Q ss_pred             cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCC
Q psy463          201 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINE  280 (790)
Q Consensus       201 ~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~  280 (790)
                        ..+||++++++|+      ..+++                 ...+....+.|||||+.++++....+..+||++++++
T Consensus       227 --~~~l~~~dl~~g~------~~~l~-----------------~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~  281 (433)
T PRK04922        227 --RSAIYVQDLATGQ------RELVA-----------------SFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGS  281 (433)
T ss_pred             --CcEEEEEECCCCC------EEEec-----------------cCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCC
Confidence              2689999999886      34444                 3334445789999999555443333456799999999


Q ss_pred             CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe
Q psy463          281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT  360 (790)
Q Consensus       281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~  360 (790)
                      ++.++++....      ....+.|||||++|+|..    ++.|      ..+||++++++++      .++|+.......
T Consensus       282 g~~~~lt~~~~------~~~~~~~spDG~~l~f~s----d~~g------~~~iy~~dl~~g~------~~~lt~~g~~~~  339 (433)
T PRK04922        282 RQLTRLTNHFG------IDTEPTWAPDGKSIYFTS----DRGG------RPQIYRVAASGGS------AERLTFQGNYNA  339 (433)
T ss_pred             CCeEECccCCC------CccceEECCCCCEEEEEE----CCCC------CceEEEEECCCCC------eEEeecCCCCcc
Confidence            99888775421      134799999999999654    3566      5689999998887      777775432222


Q ss_pred             EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEE
Q psy463          361 EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIM  440 (790)
Q Consensus       361 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~  440 (790)
                       .++|||||+.|+|.+..+.  ..+|+.+++.+  ++.+.|+..       . ....+.|||||++++|.....+...|+
T Consensus       340 -~~~~SpDG~~Ia~~~~~~~--~~~I~v~d~~~--g~~~~Lt~~-------~-~~~~p~~spdG~~i~~~s~~~g~~~L~  406 (433)
T PRK04922        340 -RASVSPDGKKIAMVHGSGG--QYRIAVMDLST--GSVRTLTPG-------S-LDESPSFAPNGSMVLYATREGGRGVLA  406 (433)
T ss_pred             -CEEECCCCCEEEEEECCCC--ceeEEEEECCC--CCeEECCCC-------C-CCCCceECCCCCEEEEEEecCCceEEE
Confidence             3899999999999876532  26899999977  666777752       1 234589999999999998876677899


Q ss_pred             EEecCCCeEEEec
Q psy463          441 LFDKTGQRLLYWD  453 (790)
Q Consensus       441 ~~~~~~~~~~~l~  453 (790)
                      +++++++..+.+.
T Consensus       407 ~~~~~g~~~~~l~  419 (433)
T PRK04922        407 AVSTDGRVRQRLV  419 (433)
T ss_pred             EEECCCCceEEcc
Confidence            9999887666554

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.84  E-value=6.1e-19  Score=191.87  Aligned_cols=226  Identities=15%  Similarity=0.180  Sum_probs=157.1

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+|||||++|+|.+....          ..+||++++++++      ..+++..+... .-..|+|+++. ++|....
T Consensus       202 ~~p~wSpDG~~la~~s~~~~----------~~~l~~~~l~~g~------~~~l~~~~g~~-~~~~~SpDG~~-la~~~~~  263 (430)
T PRK00178        202 LSPRWSPDGKRIAYVSFEQK----------RPRIFVQNLDTGR------REQITNFEGLN-GAPAWSPDGSK-LAFVLSK  263 (430)
T ss_pred             eeeeECCCCCEEEEEEcCCC----------CCEEEEEECCCCC------EEEccCCCCCc-CCeEECCCCCE-EEEEEcc
Confidence            35799999999999875432          2389999998874      44555443222 23578887764 5554432


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA  271 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~  271 (790)
                      .+         ..+||++|+++++      ..+++                 ........+.|||||+.++++....+..
T Consensus       264 ~g---------~~~Iy~~d~~~~~------~~~lt-----------------~~~~~~~~~~~spDg~~i~f~s~~~g~~  311 (430)
T PRK00178        264 DG---------NPEIYVMDLASRQ------LSRVT-----------------NHPAIDTEPFWGKDGRTLYFTSDRGGKP  311 (430)
T ss_pred             CC---------CceEEEEECCCCC------eEEcc-----------------cCCCCcCCeEECCCCCEEEEEECCCCCc
Confidence            11         2689999999886      44555                 3334456789999999555554444456


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      +||++++.+|+.++++....      ....+.|||||+.|+|...    ..+      ..+|+++|+++++      .+.
T Consensus       312 ~iy~~d~~~g~~~~lt~~~~------~~~~~~~Spdg~~i~~~~~----~~~------~~~l~~~dl~tg~------~~~  369 (430)
T PRK00178        312 QIYKVNVNGGRAERVTFVGN------YNARPRLSADGKTLVMVHR----QDG------NFHVAAQDLQRGS------VRI  369 (430)
T ss_pred             eEEEEECCCCCEEEeecCCC------CccceEECCCCCEEEEEEc----cCC------ceEEEEEECCCCC------EEE
Confidence            79999999998888764321      1346899999999997654    344      4579999999887      888


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST  422 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~  422 (790)
                      |+......  .+.|+|||+.|+|.+..+.  ...||.+++++  +..+.++.       ..+....++|||
T Consensus       370 lt~~~~~~--~p~~spdg~~i~~~~~~~g--~~~l~~~~~~g--~~~~~l~~-------~~g~~~~p~ws~  427 (430)
T PRK00178        370 LTDTSLDE--SPSVAPNGTMLIYATRQQG--RGVLMLVSING--RVRLPLPT-------AQGEVREPSWSP  427 (430)
T ss_pred             ccCCCCCC--CceECCCCCEEEEEEecCC--ceEEEEEECCC--CceEECcC-------CCCCcCCCccCC
Confidence            88754332  3799999999999988732  27899999976  44445543       234456677776

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.83  E-value=1.1e-18  Score=188.53  Aligned_cols=251  Identities=12%  Similarity=0.090  Sum_probs=176.1

Q ss_pred             ceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCc
Q psy463          121 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPV  200 (790)
Q Consensus       121 ~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (790)
                      .+|+|+...... ..      ..+||++|.++..      .++++.+...+. -..|+|+++. ++|.+...        
T Consensus       183 ~riayv~~~~~~-~~------~~~l~i~d~dG~~------~~~l~~~~~~~~-~p~wSPDG~~-La~~s~~~--------  239 (448)
T PRK04792        183 TRIAYVVVNDKD-KY------PYQLMIADYDGYN------EQMLLRSPEPLM-SPAWSPDGRK-LAYVSFEN--------  239 (448)
T ss_pred             CEEEEEEeeCCC-CC------ceEEEEEeCCCCC------ceEeecCCCccc-CceECCCCCE-EEEEEecC--------
Confidence            577887654321 11      2389999987763      456777654333 3478888765 66765421        


Q ss_pred             cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCC
Q psy463          201 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINE  280 (790)
Q Consensus       201 ~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~  280 (790)
                       ...+||++|+.+++      +.+++                 ........+.|||||+.++++....+..+||++++++
T Consensus       240 -g~~~L~~~dl~tg~------~~~lt-----------------~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~t  295 (448)
T PRK04792        240 -RKAEIFVQDIYTQV------REKVT-----------------SFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIAT  295 (448)
T ss_pred             -CCcEEEEEECCCCC------eEEec-----------------CCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCC
Confidence             12689999999886      44444                 3333445789999999655554444557899999999


Q ss_pred             CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe
Q psy463          281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT  360 (790)
Q Consensus       281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~  360 (790)
                      ++.++++....      ....+.|||||++|+|...    ..|      ..+||++|+++++      .+.||.......
T Consensus       296 g~~~~lt~~~~------~~~~p~wSpDG~~I~f~s~----~~g------~~~Iy~~dl~~g~------~~~Lt~~g~~~~  353 (448)
T PRK04792        296 KALTRITRHRA------IDTEPSWHPDGKSLIFTSE----RGG------KPQIYRVNLASGK------VSRLTFEGEQNL  353 (448)
T ss_pred             CCeEECccCCC------CccceEECCCCCEEEEEEC----CCC------CceEEEEECCCCC------EEEEecCCCCCc
Confidence            98888775421      1457999999999996543    556      5689999999887      777774322222


Q ss_pred             EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEE
Q psy463          361 EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIM  440 (790)
Q Consensus       361 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~  440 (790)
                      . +.|+|||+.|+|.+....  ..+||.+++++  ++.+.|+..        .....++|||||++++|+....+...++
T Consensus       354 ~-~~~SpDG~~l~~~~~~~g--~~~I~~~dl~~--g~~~~lt~~--------~~d~~ps~spdG~~I~~~~~~~g~~~l~  420 (448)
T PRK04792        354 G-GSITPDGRSMIMVNRTNG--KFNIARQDLET--GAMQVLTST--------RLDESPSVAPNGTMVIYSTTYQGKQVLA  420 (448)
T ss_pred             C-eeECCCCCEEEEEEecCC--ceEEEEEECCC--CCeEEccCC--------CCCCCceECCCCCEEEEEEecCCceEEE
Confidence            2 789999999999876632  26899999987  666777652        1223578999999999988766667799


Q ss_pred             EEecCCCeEEEec
Q psy463          441 LFDKTGQRLLYWD  453 (790)
Q Consensus       441 ~~~~~~~~~~~l~  453 (790)
                      +++.+++..+.+.
T Consensus       421 ~~~~~G~~~~~l~  433 (448)
T PRK04792        421 AVSIDGRFKARLP  433 (448)
T ss_pred             EEECCCCceEECc
Confidence            9998876666553

>PLN02298 hydrolase, alpha/beta fold family protein

Probab=99.83  E-value=5.5e-19  Score=185.35  Aligned_cols=276  Identities=16%  Similarity=0.170  Sum_probs=160.9

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +...+...||.++++..+.|.+    .....++||++||.+...    .|........++++||.|+++|+||+|.+...
T Consensus        33 ~~~~~~~~dg~~l~~~~~~~~~----~~~~~~~VvllHG~~~~~----~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~  104 (330)
T PLN02298         33 SKSFFTSPRGLSLFTRSWLPSS----SSPPRALIFMVHGYGNDI----SWTFQSTAIFLAQMGFACFALDLEGHGRSEGL  104 (330)
T ss_pred             ccceEEcCCCCEEEEEEEecCC----CCCCceEEEEEcCCCCCc----ceehhHHHHHHHhCCCEEEEecCCCCCCCCCc
Confidence            4556777899999999998864    223568999999986542    23322233345558999999999998865421


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccc
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIY  629 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~  629 (790)
                      .   .....-...++|+.++++++.. ....+..+++|+||||||.+++.++.++|. .++++|+.+|........ ..+
T Consensus       105 ~---~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~  179 (330)
T PLN02298        105 R---AYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLANPE-GFDGAVLVAPMCKISDKIRPPW  179 (330)
T ss_pred             c---ccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhcCcc-cceeEEEecccccCCcccCCch
Confidence            1   0000111246778888888875 222344589999999999999999998885 899999998875432100 000


Q ss_pred             hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCC---CccChhhHHHHHHHHHhcCcchhcccccCCCCcCC
Q psy463          630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMD---DNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFED  706 (790)
Q Consensus       630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d---~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  706 (790)
                      .            ...     ....+....  |.+......+   ..+.....    ..+...+..    .|...+....
T Consensus       180 ~------------~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~~~~~~  232 (330)
T PLN02298        180 P------------IPQ-----ILTFVARFL--PTLAIVPTADLLEKSVKVPAK----KIIAKRNPM----RYNGKPRLGT  232 (330)
T ss_pred             H------------HHH-----HHHHHHHHC--CCCccccCCCcccccccCHHH----HHHHHhCcc----ccCCCccHHH
Confidence            0            000     000000000  0000000000   00000000    001111110    1111110000


Q ss_pred             cchhhhh-hhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-c----chHHHHH
Q psy463          707 NLEGYKI-AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-V----RPHFYHT  780 (790)
Q Consensus       707 ~~~~~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~----~~~~~~~  780 (790)
                      .....+. ......+.++ ++|+||+||++|.++|++.++.+++.+...+  ++++++++++|.+.. .    .+.+.+.
T Consensus       233 ~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~--~~l~~~~~a~H~~~~e~pd~~~~~~~~~  309 (330)
T PLN02298        233 VVELLRVTDYLGKKLKDV-SIPFIVLHGSADVVTDPDVSRALYEEAKSED--KTIKIYDGMMHSLLFGEPDENIEIVRRD  309 (330)
T ss_pred             HHHHHHHHHHHHHhhhhc-CCCEEEEecCCCCCCCHHHHHHHHHHhccCC--ceEEEcCCcEeeeecCCCHHHHHHHHHH
Confidence            0000010 0122456788 9999999999999999999999998876433  488899999999864 2    3568889


Q ss_pred             HHHHHHHhh
Q psy463          781 LERFLDSCF  789 (790)
Q Consensus       781 i~~fl~~~l  789 (790)
                      +.+||.+++
T Consensus       310 i~~fl~~~~  318 (330)
T PLN02298        310 ILSWLNERC  318 (330)
T ss_pred             HHHHHHHhc
Confidence            999998875

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.82  E-value=2.7e-18  Score=185.24  Aligned_cols=251  Identities=14%  Similarity=0.127  Sum_probs=175.5

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+   .+|+|.+....          ..+||++|.++..      ..+++.+...+. -..|+|+++. ++|.+... 
T Consensus       160 g~f~---~~iayv~~~~~----------~~~L~~~D~dG~~------~~~l~~~~~~v~-~p~wSPDG~~-la~~s~~~-  217 (427)
T PRK02889        160 GVFS---TRIAYVIKTGN----------RYQLQISDADGQN------AQSALSSPEPII-SPAWSPDGTK-LAYVSFES-  217 (427)
T ss_pred             cccc---cEEEEEEccCC----------ccEEEEECCCCCC------ceEeccCCCCcc-cceEcCCCCE-EEEEEccC-
Confidence            3565   56888874221          2389999986653      456665544443 3578887765 77766421 


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                              ...+||++|+.+|+      ...++                 ...+....+.|||||+.++++....+..+|
T Consensus       218 --------~~~~I~~~dl~~g~------~~~l~-----------------~~~g~~~~~~~SPDG~~la~~~~~~g~~~I  266 (427)
T PRK02889        218 --------KKPVVYVHDLATGR------RRVVA-----------------NFKGSNSAPAWSPDGRTLAVALSRDGNSQI  266 (427)
T ss_pred             --------CCcEEEEEECCCCC------EEEee-----------------cCCCCccceEECCCCCEEEEEEccCCCceE
Confidence                    12689999999886      33444                 334445689999999965554333445789


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      |.+++.++..++++....      ....+.|||||++|+|. +   ++.|      ..+||.+++++++      .++++
T Consensus       267 y~~d~~~~~~~~lt~~~~------~~~~~~wSpDG~~l~f~-s---~~~g------~~~Iy~~~~~~g~------~~~lt  324 (427)
T PRK02889        267 YTVNADGSGLRRLTQSSG------IDTEPFFSPDGRSIYFT-S---DRGG------APQIYRMPASGGA------AQRVT  324 (427)
T ss_pred             EEEECCCCCcEECCCCCC------CCcCeEEcCCCCEEEEE-e---cCCC------CcEEEEEECCCCc------eEEEe
Confidence            999999888877765321      13479999999999965 4   3556      5689999998876      66776


Q ss_pred             CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463          354 RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG  433 (790)
Q Consensus       354 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~  433 (790)
                      ....... .+.|||||++|+|.+..+.  ..+|+++++.+  ++.+.++..        .....++|||||+.|+|....
T Consensus       325 ~~g~~~~-~~~~SpDG~~Ia~~s~~~g--~~~I~v~d~~~--g~~~~lt~~--------~~~~~p~~spdg~~l~~~~~~  391 (427)
T PRK02889        325 FTGSYNT-SPRISPDGKLLAYISRVGG--AFKLYVQDLAT--GQVTALTDT--------TRDESPSFAPNGRYILYATQQ  391 (427)
T ss_pred             cCCCCcC-ceEECCCCCEEEEEEccCC--cEEEEEEECCC--CCeEEccCC--------CCccCceECCCCCEEEEEEec
Confidence            4322122 3789999999999887633  26899999987  666666642        233568999999999999887


Q ss_pred             CCCCeEEEEecCCCeEEEe
Q psy463          434 PGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       434 ~~~~~i~~~~~~~~~~~~l  452 (790)
                      .+...+++++++++..+.+
T Consensus       392 ~g~~~l~~~~~~g~~~~~l  410 (427)
T PRK02889        392 GGRSVLAAVSSDGRIKQRL  410 (427)
T ss_pred             CCCEEEEEEECCCCceEEe
Confidence            7777899998877655444

>PRK10566 esterase; Provisional

Probab=99.81  E-value=1.1e-18  Score=175.33  Aligned_cols=233  Identities=16%  Similarity=0.181  Sum_probs=142.6

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc---cC
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR---RL  559 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~---~~  559 (790)
                      +....+.|.+.   ..++.|+||++||.++..   ..|  .+....++++||.|+++|+||+|............   ..
T Consensus        12 ~~~~~~~p~~~---~~~~~p~vv~~HG~~~~~---~~~--~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~   83 (249)
T PRK10566         12 IEVLHAFPAGQ---RDTPLPTVFFYHGFTSSK---LVY--SYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQI   83 (249)
T ss_pred             cceEEEcCCCC---CCCCCCEEEEeCCCCccc---chH--HHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHH
Confidence            34456667631   235679999999987763   222  23445555689999999999976421100000000   00


Q ss_pred             CccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCc
Q psy463          560 GTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTF  639 (790)
Q Consensus       560 ~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~  639 (790)
                      ....++|+.++++++.+ .+.+|.+||+++|||+||.+++.++.++|.  +++.+...+......    .....  .+  
T Consensus        84 ~~~~~~~~~~~~~~l~~-~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~--~~--  152 (249)
T PRK10566         84 LLQNMQEFPTLRAAIRE-EGWLLDDRLAVGGASMGGMTALGIMARHPW--VKCVASLMGSGYFTS----LARTL--FP--  152 (249)
T ss_pred             HHHHHHHHHHHHHHHHh-cCCcCccceeEEeecccHHHHHHHHHhCCC--eeEEEEeeCcHHHHH----HHHHh--cc--
Confidence            11235777788888887 666889999999999999999999987763  344333322111000    00000  00  


Q ss_pred             cCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhh
Q psy463          640 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNK  719 (790)
Q Consensus       640 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  719 (790)
                                            +. .. .  ... ...........+...                         ++...
T Consensus       153 ----------------------~~-~~-~--~~~-~~~~~~~~~~~~~~~-------------------------~~~~~  180 (249)
T PRK10566        153 ----------------------PL-IP-E--TAA-QQAEFNNIVAPLAEW-------------------------EVTHQ  180 (249)
T ss_pred             ----------------------cc-cc-c--ccc-cHHHHHHHHHHHhhc-------------------------Chhhh
Confidence                                  00 00 0  000 000000011111111                         11134


Q ss_pred             hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCc--eEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          720 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM--FQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       720 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~--~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      +.++..+|+|++||++|.++|++++..++++++.+|.+  ++++++++++|.+.   ...+..+.+||+++|
T Consensus       181 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~~~~~~~~fl~~~~  249 (249)
T PRK10566        181 LEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PEALDAGVAFFRQHL  249 (249)
T ss_pred             hhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HHHHHHHHHHHHhhC
Confidence            45542589999999999999999999999999998874  78899999999874   467899999999886

>PLN02385 hydrolase; alpha/beta fold family protein

Probab=99.81  E-value=2.2e-18  Score=181.71  Aligned_cols=274  Identities=15%  Similarity=0.143  Sum_probs=154.1

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      .+...+|.++.+..+.|.+     ....|+||++||.++..   ..|-..+ ...+++.||.|+++|+||+|.+......
T Consensus        65 ~~~~~~g~~l~~~~~~p~~-----~~~~~~iv~lHG~~~~~---~~~~~~~-~~~l~~~g~~v~~~D~~G~G~S~~~~~~  135 (349)
T PLN02385         65 YEVNSRGVEIFSKSWLPEN-----SRPKAAVCFCHGYGDTC---TFFFEGI-ARKIASSGYGVFAMDYPGFGLSEGLHGY  135 (349)
T ss_pred             eEEcCCCCEEEEEEEecCC-----CCCCeEEEEECCCCCcc---chHHHHH-HHHHHhCCCEEEEecCCCCCCCCCCCCC
Confidence            4445689999999999863     34568999999987652   1111112 2334457999999999998765421000


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc--ccchh
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD--TIYSE  631 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~--~~~~~  631 (790)
                        ...+ ...++|+.+.++.+.. ....+..+++|+||||||.+++.++.++|. .++++|+.+|+.......  .....
T Consensus       136 --~~~~-~~~~~dv~~~l~~l~~-~~~~~~~~~~LvGhSmGG~val~~a~~~p~-~v~glVLi~p~~~~~~~~~~~~~~~  210 (349)
T PLN02385        136 --IPSF-DDLVDDVIEHYSKIKG-NPEFRGLPSFLFGQSMGGAVALKVHLKQPN-AWDGAILVAPMCKIADDVVPPPLVL  210 (349)
T ss_pred             --cCCH-HHHHHHHHHHHHHHHh-ccccCCCCEEEEEeccchHHHHHHHHhCcc-hhhheeEecccccccccccCchHHH
Confidence              0000 1235566666666544 222345689999999999999999998885 889999988865422100  00000


Q ss_pred             hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCC-ccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463          632 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDD-NVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG  710 (790)
Q Consensus       632 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~-~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  710 (790)
                      ..            .      ..+..+.... .+.. ..+. ........  ...+.....    ..+...+........
T Consensus       211 ~~------------~------~~~~~~~p~~-~~~~-~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~  264 (349)
T PLN02385        211 QI------------L------ILLANLLPKA-KLVP-QKDLAELAFRDLK--KRKMAEYNV----IAYKDKPRLRTAVEL  264 (349)
T ss_pred             HH------------H------HHHHHHCCCc-eecC-CCccccccccCHH--HHHHhhcCc----ceeCCCcchHHHHHH
Confidence            00            0      0000000000 0000 0000 00000000  000000000    000000000000111


Q ss_pred             hhh-hhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cch----HHHHHHHHH
Q psy463          711 YKI-AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRP----HFYHTLERF  784 (790)
Q Consensus       711 ~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~----~~~~~i~~f  784 (790)
                      ++. ......+.++ ++|+|++||++|.++|+..++.+++.+...  .++++++|+++|.+.. .++    +++..+.+|
T Consensus       265 l~~~~~~~~~l~~i-~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~--~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~w  341 (349)
T PLN02385        265 LRTTQEIEMQLEEV-SLPLLILHGEADKVTDPSVSKFLYEKASSS--DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISW  341 (349)
T ss_pred             HHHHHHHHHhcccC-CCCEEEEEeCCCCccChHHHHHHHHHcCCC--CceEEEeCCCeeecccCCChhhHHHHHHHHHHH
Confidence            111 1223456788 999999999999999999999999887543  3488899999999885 444    488999999


Q ss_pred             HHHhhC
Q psy463          785 LDSCFA  790 (790)
Q Consensus       785 l~~~l~  790 (790)
                      |+++++
T Consensus       342 L~~~~~  347 (349)
T PLN02385        342 LDSHST  347 (349)
T ss_pred             HHHhcc
Confidence            998763

>PLN02442 S-formylglutathione hydrolase

Probab=99.80  E-value=3.1e-18  Score=173.57  Aligned_cols=245  Identities=18%  Similarity=0.253  Sum_probs=149.7

Q ss_pred             eEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcCCCCCC-
Q psy463          470 VEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDGRNSAL-  546 (790)
Q Consensus       470 ~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~rG~~~-  546 (790)
                      .....+.++ -|..+.+.+|+|+. .  ..+++|+|+++||.++..   ..|.. .-...+++..|++|++||..+++. 
T Consensus        18 ~~~~~~~s~~l~~~~~~~vy~P~~-~--~~~~~Pvv~~lHG~~~~~---~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~   91 (283)
T PLN02442         18 NRRYKHFSSTLGCSMTFSVYFPPA-S--DSGKVPVLYWLSGLTCTD---ENFIQKSGAQRAAAARGIALVAPDTSPRGLN   91 (283)
T ss_pred             EEEEEEeccccCCceEEEEEcCCc-c--cCCCCCEEEEecCCCcCh---HHHHHhhhHHHHHhhcCeEEEecCCCCCCCC
Confidence            344455553 46789999999984 2  457899999999987763   23321 112355666899999999764431 


Q ss_pred             -Chh----------h-hHhhhhccCCccchhH-HH-HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEE
Q psy463          547 -KGN----------T-LKYAGYRRLGTVEIYD-QI-NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKC  612 (790)
Q Consensus       547 -~g~----------~-~~~~~~~~~~~~~~~D-~~-~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~  612 (790)
                       .+.          . +.......++...+.+ +. +...++.+.+..+|.++++|+|+||||++++.++.++|+ .|++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~-~~~~  170 (283)
T PLN02442         92 VEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD-KYKS  170 (283)
T ss_pred             CCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch-hEEE
Confidence             010          0 0001111111111111 11 222233332334688999999999999999999999885 8999


Q ss_pred             EEEeCCCCCccccc--ccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcC
Q psy463          613 GISVAPVTDWIYYD--TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD  690 (790)
Q Consensus       613 ~v~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~  690 (790)
                      +++.+|+.++....  ......+++.+                                                     
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~g~~-----------------------------------------------------  197 (283)
T PLN02442        171 VSAFAPIANPINCPWGQKAFTNYLGSD-----------------------------------------------------  197 (283)
T ss_pred             EEEECCccCcccCchhhHHHHHHcCCC-----------------------------------------------------
Confidence            99999987643100  00000011100                                                     


Q ss_pred             cchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchh-hhHHHHHHHHhcCCceEEEEcCCCCCc
Q psy463          691 IMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIMFQSQTYPDEEHG  769 (790)
Q Consensus       691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~~~~~~~p~~~H~  769 (790)
                                    ......+...+++..+... ++|+|++||++|..++.. ++..+++++++.|.++++.++|+.+|.
T Consensus       198 --------------~~~~~~~d~~~~~~~~~~~-~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~  262 (283)
T PLN02442        198 --------------KADWEEYDATELVSKFNDV-SATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS  262 (283)
T ss_pred             --------------hhhHHHcChhhhhhhcccc-CCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence                          0000111122223444456 899999999999999974 688999999999999999999999997


Q ss_pred             CCCcchHHHHHHHHHHHHhhC
Q psy463          770 LIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       770 ~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      +. ....+.+....|..++++
T Consensus       263 ~~-~~~~~i~~~~~~~~~~~~  282 (283)
T PLN02442        263 YF-FIATFIDDHINHHAQALK  282 (283)
T ss_pred             HH-HHHHHHHHHHHHHHHHhc
Confidence            76 233344444555555543

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.79  E-value=1.7e-17  Score=179.32  Aligned_cols=161  Identities=11%  Similarity=0.075  Sum_probs=115.2

Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  330 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~  330 (790)
                      .+.|||||+.+++.....+..+||+++++++..++++....      ....+.|||||++|+|...    .+|      .
T Consensus       252 ~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~------~~~~~~wSpDG~~i~f~s~----~~g------~  315 (429)
T PRK01742        252 APAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAG------NNTEPSWSPDGQSILFTSD----RSG------S  315 (429)
T ss_pred             ceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCC------CcCCEEECCCCCEEEEEEC----CCC------C
Confidence            57999999966665433445679999999998888875432      2458999999999996543    566      5


Q ss_pred             cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCC
Q psy463          331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSAN  410 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~  410 (790)
                      .+||.++..++.      .+.++...   . .+.|+|||+.|++.+..      .++.+++.+  ++.+.++..      
T Consensus       316 ~~I~~~~~~~~~------~~~l~~~~---~-~~~~SpDG~~ia~~~~~------~i~~~Dl~~--g~~~~lt~~------  371 (429)
T PRK01742        316 PQVYRMSASGGG------ASLVGGRG---Y-SAQISADGKTLVMINGD------NVVKQDLTS--GSTEVLSST------  371 (429)
T ss_pred             ceEEEEECCCCC------eEEecCCC---C-CccCCCCCCEEEEEcCC------CEEEEECCC--CCeEEecCC------
Confidence            689999988776      55554322   2 36899999999987642      577788876  565666542      


Q ss_pred             CcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEec
Q psy463          411 QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       411 ~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  453 (790)
                        .....++|||||+++++.....+...+++++.+++..+.+.
T Consensus       372 --~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~  412 (429)
T PRK01742        372 --FLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLP  412 (429)
T ss_pred             --CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEcc
Confidence              12345889999999999876544556777777776666553

>PRK05077 frsA fermentation/respiration switch protein; Reviewed

Probab=99.79  E-value=8.6e-18  Score=178.70  Aligned_cols=248  Identities=19%  Similarity=0.178  Sum_probs=152.9

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+.++..+|..+.|+++.|..     .++.|+||+.||..+..  .+.|.  .....++++||+|+++|+||+|.+.
T Consensus       167 ~~e~v~i~~~~g~~l~g~l~~P~~-----~~~~P~Vli~gG~~~~~--~~~~~--~~~~~La~~Gy~vl~~D~pG~G~s~  237 (414)
T PRK05077        167 ELKELEFPIPGGGPITGFLHLPKG-----DGPFPTVLVCGGLDSLQ--TDYYR--LFRDYLAPRGIAMLTIDMPSVGFSS  237 (414)
T ss_pred             ceEEEEEEcCCCcEEEEEEEECCC-----CCCccEEEEeCCcccch--hhhHH--HHHHHHHhCCCEEEEECCCCCCCCC
Confidence            477889998888899999999972     35678887766544321  12222  2233455689999999999987543


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~  628 (790)
                      .. .      ..........++++++.+ .+.+|.+||+++|||+||++++.++..+|. +++++|+.+|+.+...... 
T Consensus       238 ~~-~------~~~d~~~~~~avld~l~~-~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~-ri~a~V~~~~~~~~~~~~~-  307 (414)
T PRK05077        238 KW-K------LTQDSSLLHQAVLNALPN-VPWVDHTRVAAFGFRFGANVAVRLAYLEPP-RLKAVACLGPVVHTLLTDP-  307 (414)
T ss_pred             CC-C------ccccHHHHHHHHHHHHHh-CcccCcccEEEEEEChHHHHHHHHHHhCCc-CceEEEEECCccchhhcch-
Confidence            21 0      000111122467788877 777899999999999999999999988774 8999999888754211000 


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                        ...-..      +..+...    ....+         |..+  .   ....+...+......               .
T Consensus       308 --~~~~~~------p~~~~~~----la~~l---------g~~~--~---~~~~l~~~l~~~sl~---------------~  346 (414)
T PRK05077        308 --KRQQQV------PEMYLDV----LASRL---------GMHD--A---SDEALRVELNRYSLK---------------V  346 (414)
T ss_pred             --hhhhhc------hHHHHHH----HHHHh---------CCCC--C---ChHHHHHHhhhccch---------------h
Confidence              000000      0001000    00000         0000  0   001111111111000               0


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC  788 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~  788 (790)
                      .     .  ....++ ++|+|++||++|.++|++.++.+.+..+.    .+++++|++ |.+. ...+++..+.+||+++
T Consensus       347 ~-----~--~l~~~i-~~PvLiI~G~~D~ivP~~~a~~l~~~~~~----~~l~~i~~~-~~~e-~~~~~~~~i~~wL~~~  412 (414)
T PRK05077        347 Q-----G--LLGRRC-PTPMLSGYWKNDPFSPEEDSRLIASSSAD----GKLLEIPFK-PVYR-NFDKALQEISDWLEDR  412 (414)
T ss_pred             h-----h--hhccCC-CCcEEEEecCCCCCCCHHHHHHHHHhCCC----CeEEEccCC-CccC-CHHHHHHHHHHHHHHH
Confidence            0     0  012467 89999999999999999999988766543    488999986 3333 6889999999999998


Q ss_pred             hC
Q psy463          789 FA  790 (790)
Q Consensus       789 l~  790 (790)
                      |.
T Consensus       413 l~  414 (414)
T PRK05077        413 LC  414 (414)
T ss_pred             hC
Confidence            73

>TIGR02821 fghA_ester_D S-formylglutathione hydrolase

Probab=99.79  E-value=2e-17  Score=167.58  Aligned_cols=238  Identities=16%  Similarity=0.143  Sum_probs=148.9

Q ss_pred             EEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc-hHHHHHhcCCeEEEEEcC--CCCCCC
Q psy463          472 YMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-WNLYLADNKDIVVAYIDG--RNSALK  547 (790)
Q Consensus       472 ~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~~~~~~~~G~~v~~~d~--rG~~~~  547 (790)
                      ...+.+. .+..+.+.+|+|+++.   .+++|+|+++||.++..   ..|... ....++++.|+.|++||.  +|++..
T Consensus        15 ~~~~~s~~~~~~~~~~v~~P~~~~---~~~~P~vvllHG~~~~~---~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~   88 (275)
T TIGR02821        15 FYRHKSETCGVPMTFGVFLPPQAA---AGPVPVLWYLSGLTCTH---ENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIA   88 (275)
T ss_pred             EEEEeccccCCceEEEEEcCCCcc---CCCCCEEEEccCCCCCc---cHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCC
Confidence            3444433 4678899999998753   34689999999988762   333221 123455567999999997  554422


Q ss_pred             hh--hhH---------hhhhccCC-c-cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEE
Q psy463          548 GN--TLK---------YAGYRRLG-T-VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGI  614 (790)
Q Consensus       548 g~--~~~---------~~~~~~~~-~-~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v  614 (790)
                      +.  .|.         +.....+. . .....+.+.+..+++....+|.++++|+|+||||++++.++.++|+ .+++++
T Consensus        89 ~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~-~~~~~~  167 (275)
T TIGR02821        89 GEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD-RFKSVS  167 (275)
T ss_pred             CCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc-cceEEE
Confidence            21  110         00000000 0 1122223334443432223788899999999999999999999886 899999


Q ss_pred             EeCCCCCcccccc--cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc
Q psy463          615 SVAPVTDWIYYDT--IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM  692 (790)
Q Consensus       615 ~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~  692 (790)
                      +.+|+.+......  .....+++.+                                                     . 
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------------------------------------~-  193 (275)
T TIGR02821       168 AFAPIVAPSRCPWGQKAFSAYLGAD-----------------------------------------------------E-  193 (275)
T ss_pred             EECCccCcccCcchHHHHHHHhccc-----------------------------------------------------c-
Confidence            9999866421000  0000000000                                                     0 


Q ss_pred             hhcccccCCCCcCCcchhhhhhhhhhhhh--ccCCccEEEEecCCCcccch-hhhHHHHHHHHhcCCceEEEEcCCCCCc
Q psy463          693 FQSQRYMGLPTFEDNLEGYKIAALNNKVD--RIRDKQYLLVHGTMDDNVHF-QQSMMLAKSLQHADIMFQSQTYPDEEHG  769 (790)
Q Consensus       693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~P~Lii~G~~D~~v~~-~~~~~l~~~l~~~g~~~~~~~~p~~~H~  769 (790)
                                      ..+...++...+.  +. ..|+|+.||+.|..++. .++..+.++|+++|+++++.++||++|.
T Consensus       194 ----------------~~~~~~~~~~~~~~~~~-~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~  256 (275)
T TIGR02821       194 ----------------AAWRSYDASLLVADGGR-HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHS  256 (275)
T ss_pred             ----------------cchhhcchHHHHhhccc-CCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence                            0000001112222  23 68999999999999999 6889999999999999999999999999


Q ss_pred             CCCcchHHHHHHHHHHHHh
Q psy463          770 LIGVRPHFYHTLERFLDSC  788 (790)
Q Consensus       770 ~~~~~~~~~~~i~~fl~~~  788 (790)
                      +. .....+...++|+..+
T Consensus       257 f~-~~~~~~~~~~~~~~~~  274 (275)
T TIGR02821       257 YY-FIASFIADHLRHHAER  274 (275)
T ss_pred             ch-hHHHhHHHHHHHHHhh
Confidence            88 3556666777776654

This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.

>KOG2237|consensus

Probab=99.78  E-value=2.6e-15  Score=155.50  Aligned_cols=188  Identities=21%  Similarity=0.231  Sum_probs=149.4

Q ss_pred             CcEEEEEeecCC-CCeEEEEecCCCe-----EEEeccchhHHHhhccCCCC--ceEEEEEEcCCCcEEEEEEEeCCCCCC
Q psy463          424 VSYYVLSCIGPG-IPEIMLFDKTGQR-----LLYWDTNEDLRTALTNITLP--SVEYMSVPIQPNMEAQVKLFLPPGIDT  495 (790)
Q Consensus       424 g~~~~~~~~~~~-~~~i~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~dg~~i~~~~~~P~~~~~  495 (790)
                      .+.+-|..++.- |+.||-+|+..++     .+.++.+      +.++...  .++.+.+.++||..++-.++.-...+ 
T Consensus       393 ~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~------lpg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k-  465 (712)
T KOG2237|consen  393 SSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVV------LPGFDASDYVVERIEVSSKDGTKVPMFIVYKKDIK-  465 (712)
T ss_pred             CceEEEEEeccCCCCeEEEeeccCCCCCCcceeeeccc------cCcccccceEEEEEEEecCCCCccceEEEEechhh-
Confidence            456667777776 9999999997752     2233322      2444443  67888999999999998888755544 


Q ss_pred             CCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHH
Q psy463          496 SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQ  575 (790)
Q Consensus       496 ~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~  575 (790)
                       ..+..|.+++.||+-+-. +...|+.. ...++ ++|++....|.||.|++|..|...+........++|+++++++|.
T Consensus       466 -~dg~~P~LLygYGay~is-l~p~f~~s-rl~ll-d~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLv  541 (712)
T KOG2237|consen  466 -LDGSKPLLLYGYGAYGIS-LDPSFRAS-RLSLL-DRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLV  541 (712)
T ss_pred             -hcCCCceEEEEeccccee-eccccccc-eeEEE-ecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHH
Confidence             456789999999987753 35555532 11233 489999999999999999999988887777788999999999999


Q ss_pred             HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc
Q psy463          576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY  624 (790)
Q Consensus       576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~  624 (790)
                      + .+++.+++.++.|.|.||.++..++.++|+ .|.|+++..|+.|+..
T Consensus       542 e-~gyt~~~kL~i~G~SaGGlLvga~iN~rPd-LF~avia~VpfmDvL~  588 (712)
T KOG2237|consen  542 E-NGYTQPSKLAIEGGSAGGLLVGACINQRPD-LFGAVIAKVPFMDVLN  588 (712)
T ss_pred             H-cCCCCccceeEecccCccchhHHHhccCch-HhhhhhhcCcceehhh
Confidence            9 899999999999999999999999999986 9999999999988753

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.77  E-value=5.1e-16  Score=153.17  Aligned_cols=352  Identities=14%  Similarity=0.136  Sum_probs=212.5

Q ss_pred             CCceeEeCCCCCceEEEEec--C--CceeEEEecccCCCCCCCcCCCccccCCCCcc---ccccCCCcceeEeeeecccc
Q psy463            9 SSSALWFSPSGNNLAYASFD--D--NRTVIMTIPFYGNPGHPSSQYTQAINLREPVL---SRVNWANESVVAAWVNRVQN   81 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~--~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~w~~~~~~~~~~~r~~~   81 (790)
                      =...|.|||||++|||++.-  .  ...++|++|..+|+         ++|+|+...   ..++|.+|+.++..+---| 
T Consensus        80 Vvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge---------~kRiTyfGr~fT~VaG~~~dg~iiV~TD~~t-  149 (668)
T COG4946          80 VVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGE---------AKRITYFGRRFTRVAGWIPDGEIIVSTDFHT-  149 (668)
T ss_pred             eeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCc---------EEEEEEeccccceeeccCCCCCEEEEeccCC-
Confidence            34567899999999996532  2  24689999999997         777776642   2346777766553332221 


Q ss_pred             eeEEEEeeCCCCeeeEEEeecCCCCccccCC-cc---ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCcc
Q psy463           82 RARITRCSINEGTCDVVFSRDLDRGWFEPFD-HL---RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIK  157 (790)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~  157 (790)
                               +-.+++.++....+..-.++.. .|   -.-.||..++--...+-..++.|+||+-+.||+-...+..   
T Consensus       150 ---------PF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRntydLP~WK~YkGGtrGklWis~d~g~t---  217 (668)
T COG4946         150 ---------PFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNTYDLPHWKGYKGGTRGKLWISSDGGKT---  217 (668)
T ss_pred             ---------CcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCcccCcccccccCCccceEEEEecCCcc---
Confidence                     2234555555544444222211 22   2346773332222334446799999999999987765533   


Q ss_pred             CCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhh
Q psy463          158 DKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILA  237 (790)
Q Consensus       158 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~  237 (790)
                         ...+-+-+.++..++-..    +++||++...+.         .+||.+|+++..      .+..|           
T Consensus       218 ---FeK~vdl~~~vS~PmIV~----~RvYFlsD~eG~---------GnlYSvdldGkD------lrrHT-----------  264 (668)
T COG4946         218 ---FEKFVDLDGNVSSPMIVG----ERVYFLSDHEGV---------GNLYSVDLDGKD------LRRHT-----------  264 (668)
T ss_pred             ---eeeeeecCCCcCCceEEc----ceEEEEecccCc---------cceEEeccCCch------hhhcC-----------
Confidence               111111122233333332    238999876544         799999999876      34444           


Q ss_pred             cccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEE-eCC-----CcccccCCce-eEcc-CCC
Q psy463          238 WDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSR-DLD-----RGWFEPFDHL-RFSS-DGK  309 (790)
Q Consensus       238 ~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~-~~~-----~~~~~~~~~~-~~sp-Dg~  309 (790)
                            +...|+.+ .-+.|||.+.+...+.    ||++|.++...+.|--. +.+     ..+..+.... .||+ +|.
T Consensus       265 ------nFtdYY~R-~~nsDGkrIvFq~~Gd----IylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd  333 (668)
T COG4946         265 ------NFTDYYPR-NANSDGKRIVFQNAGD----IYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGD  333 (668)
T ss_pred             ------Cchhcccc-ccCCCCcEEEEecCCc----EEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCc
Confidence                  44444432 3477999666665554    99999988766654221 100     1111100000 0111 344


Q ss_pred             EEEEEEcccc-----------------------------------ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC
Q psy463          310 KMLLILSHNQ-----------------------------------ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR  354 (790)
Q Consensus       310 ~i~~~~~~~~-----------------------------------~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~  354 (790)
                      .|++ +|...                                   ..+|       ..|-++|.++++      .+.+..
T Consensus       334 ~ia~-VSRGkaFi~~~~~~~~iqv~~~~~VrY~r~~~~~e~~vigt~dg-------D~l~iyd~~~~e------~kr~e~  399 (668)
T COG4946         334 YIAL-VSRGKAFIMRPWDGYSIQVGKKGGVRYRRIQVDPEGDVIGTNDG-------DKLGIYDKDGGE------VKRIEK  399 (668)
T ss_pred             EEEE-EecCcEEEECCCCCeeEEcCCCCceEEEEEccCCcceEEeccCC-------ceEEEEecCCce------EEEeeC
Confidence            4442 22110                                   0122       256777888877      777766


Q ss_pred             CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecC
Q psy463          355 GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGP  434 (790)
Q Consensus       355 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~  434 (790)
                      +-..+.. ...++|||.++...++     .+||.++++.  ++++.+-.+      ..+.+....|+|+++++++.....
T Consensus       400 ~lg~I~a-v~vs~dGK~~vvaNdr-----~el~vididn--gnv~~idkS------~~~lItdf~~~~nsr~iAYafP~g  465 (668)
T COG4946         400 DLGNIEA-VKVSPDGKKVVVANDR-----FELWVIDIDN--GNVRLIDKS------EYGLITDFDWHPNSRWIAYAFPEG  465 (668)
T ss_pred             CccceEE-EEEcCCCcEEEEEcCc-----eEEEEEEecC--CCeeEeccc------ccceeEEEEEcCCceeEEEecCcc
Confidence            5544444 7789999988776555     7999999998  777766553      556788899999999999986532


Q ss_pred             C-CCeEEEEecCCCeEEEecc
Q psy463          435 G-IPEIMLFDKTGQRLLYWDT  454 (790)
Q Consensus       435 ~-~~~i~~~~~~~~~~~~l~~  454 (790)
                      = ...|.++|++++++..++.
T Consensus       466 y~tq~Iklydm~~~Kiy~vTT  486 (668)
T COG4946         466 YYTQSIKLYDMDGGKIYDVTT  486 (668)
T ss_pred             eeeeeEEEEecCCCeEEEecC
Confidence            2 6779999999988876654

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.76  E-value=2.5e-17  Score=177.97  Aligned_cols=133  Identities=17%  Similarity=0.185  Sum_probs=90.0

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      ...+.|||||+.++++....+..+||.++..++..+.+. .   .+     ..+.|||||+.|++...            
T Consensus       294 ~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~-~---~~-----~~~~~SpDG~~ia~~~~------------  352 (429)
T PRK01742        294 NTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVG-G---RG-----YSAQISADGKTLVMING------------  352 (429)
T ss_pred             cCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEec-C---CC-----CCccCCCCCCEEEEEcC------------
Confidence            456899999995555544345568999999887766552 1   11     25789999999985332            


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccccc
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTS  408 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~  408 (790)
                        ..++++|+.+++      .+.++... .. ..+.|+|||+.|+|.+.++..  ..++.++.++  ...+.|+.     
T Consensus       353 --~~i~~~Dl~~g~------~~~lt~~~-~~-~~~~~sPdG~~i~~~s~~g~~--~~l~~~~~~G--~~~~~l~~-----  413 (429)
T PRK01742        353 --DNVVKQDLTSGS------TEVLSSTF-LD-ESPSISPNGIMIIYSSTQGLG--KVLQLVSADG--RFKARLPG-----  413 (429)
T ss_pred             --CCEEEEECCCCC------eEEecCCC-CC-CCceECCCCCEEEEEEcCCCc--eEEEEEECCC--CceEEccC-----
Confidence              247889998887      66666442 22 238899999999999877542  4566677766  44555543     


Q ss_pred             CCCcccEEEEEEecC
Q psy463          409 ANQKCSYSGATFSTN  423 (790)
Q Consensus       409 ~~~~~~~~~~~~s~d  423 (790)
                        ..+....++|||-
T Consensus       414 --~~g~~~~p~wsp~  426 (429)
T PRK01742        414 --SDGQVKFPAWSPY  426 (429)
T ss_pred             --CCCCCCCcccCCC
Confidence              2345566888873

>PHA02857 monoglyceride lipase; Provisional

Probab=99.76  E-value=4.3e-17  Score=166.68  Aligned_cols=264  Identities=13%  Similarity=0.053  Sum_probs=151.7

Q ss_pred             EcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhh
Q psy463          476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG  555 (790)
Q Consensus       476 ~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~  555 (790)
                      ...||..+.+.++.|.+      .+.|+|+++||.+...   ..|.  .....+++.||.|+++|+||+|.+....  ..
T Consensus         6 ~~~~g~~l~~~~~~~~~------~~~~~v~llHG~~~~~---~~~~--~~~~~l~~~g~~via~D~~G~G~S~~~~--~~   72 (276)
T PHA02857          6 FNLDNDYIYCKYWKPIT------YPKALVFISHGAGEHS---GRYE--ELAENISSLGILVFSHDHIGHGRSNGEK--MM   72 (276)
T ss_pred             ecCCCCEEEEEeccCCC------CCCEEEEEeCCCcccc---chHH--HHHHHHHhCCCEEEEccCCCCCCCCCcc--CC
Confidence            34599999999998842      3458899999987652   2333  2334455579999999999988653210  00


Q ss_pred             hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcC
Q psy463          556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMG  635 (790)
Q Consensus       556 ~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g  635 (790)
                      ...+. ..+.|+...+.++...   ....+++++||||||.+++.++.++|+ .++++|+.+|..+....  .+....  
T Consensus        73 ~~~~~-~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~~p~-~i~~lil~~p~~~~~~~--~~~~~~--  143 (276)
T PHA02857         73 IDDFG-VYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYKNPN-LFTAMILMSPLVNAEAV--PRLNLL--  143 (276)
T ss_pred             cCCHH-HHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHhCcc-ccceEEEeccccccccc--cHHHHH--
Confidence            11111 2256666666666542   224689999999999999999998885 78999999987542210  000000  


Q ss_pred             CCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh-hh
Q psy463          636 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK-IA  714 (790)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  714 (790)
                              ..+.       .....  +...... .................  .+..    ................ ..
T Consensus       144 --------~~~~-------~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~  199 (276)
T PHA02857        144 --------AAKL-------MGIFY--PNKIVGK-LCPESVSRDMDEVYKYQ--YDPL----VNHEKIKAGFASQVLKATN  199 (276)
T ss_pred             --------HHHH-------HHHhC--CCCccCC-CCHhhccCCHHHHHHHh--cCCC----ccCCCccHHHHHHHHHHHH
Confidence                    0000       00000  0000000 00000000000000000  0000    0000000000000000 00


Q ss_pred             hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHHHHhh
Q psy463          715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl~~~l  789 (790)
                      .....+.++ ++|+|++||++|.++|+..+..+++.+..   .+++.++++++|.+..    .++++++.+.+||+++-
T Consensus       200 ~~~~~l~~i-~~Pvliv~G~~D~i~~~~~~~~l~~~~~~---~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~  274 (276)
T PHA02857        200 KVRKIIPKI-KTPILILQGTNNEISDVSGAYYFMQHANC---NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV  274 (276)
T ss_pred             HHHHhcccC-CCCEEEEecCCCCcCChHHHHHHHHHccC---CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence            112456678 99999999999999999999999887743   3589999999999986    36789999999999863

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=99.76  E-value=2.9e-17  Score=172.56  Aligned_cols=125  Identities=17%  Similarity=0.162  Sum_probs=92.3

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ...+....++|||||+.+++++..++.++||+++++++..++++...+.      ...|.|||||++|+|...    ..|
T Consensus       279 ~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~------~~~p~~SpdG~~i~~~~~----~~g  348 (425)
T COG0823         279 NGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGG------NSNPVWSPDGDKIVFESS----SGG  348 (425)
T ss_pred             cCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCC------CcCccCCCCCCEEEEEec----cCC
Confidence            3444455899999999666666666788999999999999888876532      337999999999997664    345


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                            ..++...++.++.     ..+.++.....  ..+.|+++|+.+.|.+..+  ....|+.++..+
T Consensus       349 ------~~~i~~~~~~~~~-----~~~~lt~~~~~--e~ps~~~ng~~i~~~s~~~--~~~~l~~~s~~g  403 (425)
T COG0823         349 ------QWDIDKNDLASGG-----KIRILTSTYLN--ESPSWAPNGRMIMFSSGQG--GGSVLSLVSLDG  403 (425)
T ss_pred             ------ceeeEEeccCCCC-----cEEEccccccC--CCCCcCCCCceEEEeccCC--CCceEEEeeccc
Confidence                  4678888887665     14455544322  2389999999999998874  337888888776

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.75  E-value=2.7e-16  Score=171.25  Aligned_cols=168  Identities=12%  Similarity=0.085  Sum_probs=122.4

Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  330 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~  330 (790)
                      .+.|||||+.++++....+..+||.+++.++..+.++....      ....+.|+|||++|+|...    +.|      .
T Consensus       238 ~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~------~~~~~~~s~dg~~l~~~s~----~~g------~  301 (417)
T TIGR02800       238 APAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPG------IDTEPSWSPDGKSIAFTSD----RGG------S  301 (417)
T ss_pred             ceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCC------CCCCEEECCCCCEEEEEEC----CCC------C
Confidence            47899999955555443445679999999988777764321      1347899999999996543    556      5


Q ss_pred             cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCC
Q psy463          331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSAN  410 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~  410 (790)
                      .+||++++++++      .++|+....... .+.|+|||+.|+|......  ..+|+.+++.+  +..+.++..      
T Consensus       302 ~~iy~~d~~~~~------~~~l~~~~~~~~-~~~~spdg~~i~~~~~~~~--~~~i~~~d~~~--~~~~~l~~~------  364 (417)
T TIGR02800       302 PQIYMMDADGGE------VRRLTFRGGYNA-SPSWSPDGDLIAFVHREGG--GFNIAVMDLDG--GGERVLTDT------  364 (417)
T ss_pred             ceEEEEECCCCC------EEEeecCCCCcc-CeEECCCCCEEEEEEccCC--ceEEEEEeCCC--CCeEEccCC------
Confidence            689999998887      677775433333 3789999999999887632  27899999987  555655531      


Q ss_pred             CcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEec
Q psy463          411 QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       411 ~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  453 (790)
                        .....+.|||||+++++.+...+...+++.+.+++..+.++
T Consensus       365 --~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~~~~~~~  405 (417)
T TIGR02800       365 --GLDESPSFAPNGRMILYATTRGGRGVLGLVSTDGRFRARLP  405 (417)
T ss_pred             --CCCCCceECCCCCEEEEEEeCCCcEEEEEEECCCceeeECC
Confidence              12345789999999999988777778888887776655543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>COG1647 Esterase/lipase [General function prediction only]

Probab=99.75  E-value=1.7e-17  Score=149.33  Aligned_cols=221  Identities=15%  Similarity=0.078  Sum_probs=150.1

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      -.|+++||+.|+..     ...+....+.++||.|.+|.++|+|-....|.......|    +.|+.++.++|.+ .++ 
T Consensus        16 ~AVLllHGFTGt~~-----Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~-~gy-   84 (243)
T COG1647          16 RAVLLLHGFTGTPR-----DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKE-AGY-   84 (243)
T ss_pred             EEEEEEeccCCCcH-----HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHH-cCC-
Confidence            67899999998732     244666777789999999999999998888887766655    7888889999986 453 


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCC
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDK  661 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  661 (790)
                        +.|+|+|.||||.+++.++.++|   .+.++..|+..+.......+ +.          ...        ++++.++.
T Consensus        85 --~eI~v~GlSmGGv~alkla~~~p---~K~iv~m~a~~~~k~~~~ii-e~----------~l~--------y~~~~kk~  140 (243)
T COG1647          85 --DEIAVVGLSMGGVFALKLAYHYP---PKKIVPMCAPVNVKSWRIII-EG----------LLE--------YFRNAKKY  140 (243)
T ss_pred             --CeEEEEeecchhHHHHHHHhhCC---ccceeeecCCcccccchhhh-HH----------HHH--------HHHHhhhc
Confidence              68999999999999999999887   35555555544322111000 00          000        00111000


Q ss_pred             cEEEE---eecCCC--ccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCC
Q psy463          662 QYLLV---HGTMDD--NVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMD  736 (790)
Q Consensus       662 p~l~~---~g~~d~--~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D  736 (790)
                      +..-.   ..+...  ..+..+..++.+.+..                           ....++.| ..|+|++.|.+|
T Consensus       141 e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~---------------------------~~~~~~~I-~~pt~vvq~~~D  192 (243)
T COG1647         141 EGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKD---------------------------ARRSLDKI-YSPTLVVQGRQD  192 (243)
T ss_pred             cCCCHHHHHHHHHHhhcchHHHHHHHHHHHHH---------------------------HHhhhhhc-ccchhheecccC
Confidence            00000   000000  0011222222222211                           11567888 999999999999


Q ss_pred             cccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHH
Q psy463          737 DNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDS  787 (790)
Q Consensus       737 ~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~  787 (790)
                      +.||.+.+..+++.+...  +.++.+|+++||.+..  .++.+.+.+..||++
T Consensus       193 ~mv~~~sA~~Iy~~v~s~--~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~  243 (243)
T COG1647         193 EMVPAESANFIYDHVESD--DKELKWLEGSGHVITLDKERDQVEEDVITFLEK  243 (243)
T ss_pred             CCCCHHHHHHHHHhccCC--cceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence            999999999999998865  4599999999999998  889999999999973

>PRK10162 acetyl esterase; Provisional

Probab=99.74  E-value=1.4e-16  Score=164.54  Aligned_cols=246  Identities=16%  Similarity=0.149  Sum_probs=156.8

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+.+.+...+| .+...+|.|..      ...|+||++|||+......+.+. .+...++...|+.|+.+|||.++....
T Consensus        57 ~~~~~i~~~~g-~i~~~~y~P~~------~~~p~vv~~HGGg~~~g~~~~~~-~~~~~la~~~g~~Vv~vdYrlape~~~  128 (318)
T PRK10162         57 TRAYMVPTPYG-QVETRLYYPQP------DSQATLFYLHGGGFILGNLDTHD-RIMRLLASYSGCTVIGIDYTLSPEARF  128 (318)
T ss_pred             EEEEEEecCCC-ceEEEEECCCC------CCCCEEEEEeCCcccCCCchhhh-HHHHHHHHHcCCEEEEecCCCCCCCCC
Confidence            45667777677 58899999952      23589999999987543222322 234455555699999999998765321


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-----CCceEEEEEeCCCCC
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-----SNVFKCGISVAPVTD  621 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-----~~~~~~~v~~~~~~~  621 (790)
                      +           ..++|+.++++|+.++   ++ +|.+||+|+|+|+||.+++.++.+..     ...++++++.+|+.+
T Consensus       129 p-----------~~~~D~~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~  196 (318)
T PRK10162        129 P-----------QAIEEIVAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG  196 (318)
T ss_pred             C-----------CcHHHHHHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence            1           3578999999998753   23 68899999999999999998876421     136778888888766


Q ss_pred             cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463          622 WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL  701 (790)
Q Consensus       622 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~  701 (790)
                      ......   ....+..        +                         ..........+.+.            |.+.
T Consensus       197 ~~~~~s---~~~~~~~--------~-------------------------~~l~~~~~~~~~~~------------y~~~  228 (318)
T PRK10162        197 LRDSVS---RRLLGGV--------W-------------------------DGLTQQDLQMYEEA------------YLSN  228 (318)
T ss_pred             CCCChh---HHHhCCC--------c-------------------------cccCHHHHHHHHHH------------hCCC
Confidence            421000   0000000        0                         00000000000000            0000


Q ss_pred             CCcCCcchhhhhhhhh-hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cc
Q psy463          702 PTFEDNLEGYKIAALN-NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VR  774 (790)
Q Consensus       702 ~~~~~~~~~~~~~~~~-~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~  774 (790)
                      +.  +....+  .++. ..+..- -.|+||++|+.|...  .++..+++.|+++|+++++++++|..|.+..      ..
T Consensus       229 ~~--~~~~p~--~~p~~~~l~~~-lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a  301 (318)
T PRK10162        229 DA--DRESPY--YCLFNNDLTRD-VPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTA  301 (318)
T ss_pred             cc--ccCCcc--cCcchhhhhcC-CCCeEEEecCCCcCc--ChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHH
Confidence            00  000000  0010 122111 379999999999875  5899999999999999999999999999864      35


Q ss_pred             hHHHHHHHHHHHHhhC
Q psy463          775 PHFYHTLERFLDSCFA  790 (790)
Q Consensus       775 ~~~~~~i~~fl~~~l~  790 (790)
                      .+.++.+.+||+++|+
T Consensus       302 ~~~~~~~~~~l~~~~~  317 (318)
T PRK10162        302 DDALRDGAQFFTAQLK  317 (318)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            5788999999998875

>PRK10749 lysophospholipase L2; Provisional

Probab=99.74  E-value=1.4e-16  Score=166.43  Aligned_cols=287  Identities=15%  Similarity=0.098  Sum_probs=155.0

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+...+...+|.++++..+.|..       +.++|+++||..+..   ..|. .+...+ ++.||.|+++|+||+|.++.
T Consensus        30 ~~~~~~~~~~g~~l~~~~~~~~~-------~~~~vll~HG~~~~~---~~y~-~~~~~l-~~~g~~v~~~D~~G~G~S~~   97 (330)
T PRK10749         30 REEAEFTGVDDIPIRFVRFRAPH-------HDRVVVICPGRIESY---VKYA-ELAYDL-FHLGYDVLIIDHRGQGRSGR   97 (330)
T ss_pred             ccceEEEcCCCCEEEEEEccCCC-------CCcEEEEECCccchH---HHHH-HHHHHH-HHCCCeEEEEcCCCCCCCCC
Confidence            44556666789999998887642       236899999986542   1122 122233 45899999999999987653


Q ss_pred             hhHhhhhccCC--ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc-c
Q psy463          550 TLKYAGYRRLG--TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY-D  626 (790)
Q Consensus       550 ~~~~~~~~~~~--~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~-~  626 (790)
                      .......+...  ...+.|+.+.++.+..   ..+..++.++||||||.+++.++.++|. .++++|+.+|....... .
T Consensus        98 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~~~~~l~GhSmGG~ia~~~a~~~p~-~v~~lvl~~p~~~~~~~~~  173 (330)
T PRK10749         98 LLDDPHRGHVERFNDYVDDLAAFWQQEIQ---PGPYRKRYALAHSMGGAILTLFLQRHPG-VFDAIALCAPMFGIVLPLP  173 (330)
T ss_pred             CCCCCCcCccccHHHHHHHHHHHHHHHHh---cCCCCCeEEEEEcHHHHHHHHHHHhCCC-CcceEEEECchhccCCCCC
Confidence            32111001000  0123444444444333   1245789999999999999999998875 78899988886432110 0


Q ss_pred             ccchhhhcCCCC-ccCchhhhhhccccchhhhccCCcEEEEeecCCCcc-ChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463          627 TIYSERYMGLPT-FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV-HFQQSMMLAKSLQHADIMFQSQRYMGLPTF  704 (790)
Q Consensus       627 ~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  704 (790)
                      .......+.... .......+...     .......+     -..+... .........+.... ....    ..+.+.+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~-~~~~----~~~~~~~  238 (330)
T PRK10749        174 SWMARRILNWAEGHPRIRDGYAIG-----TGRWRPLP-----FAINVLTHSRERYRRNLRFYAD-DPEL----RVGGPTY  238 (330)
T ss_pred             cHHHHHHHHHHHHhcCCCCcCCCC-----CCCCCCCC-----cCCCCCCCCHHHHHHHHHHHHh-CCCc----ccCCCcH
Confidence            000000000000 00000000000     00000000     0000000 00111111121111 1100    0000000


Q ss_pred             CCcchhhhh-hhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCC---ceEEEEcCCCCCcCCC----cchH
Q psy463          705 EDNLEGYKI-AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI---MFQSQTYPDEEHGLIG----VRPH  776 (790)
Q Consensus       705 ~~~~~~~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~---~~~~~~~p~~~H~~~~----~~~~  776 (790)
                      ......... ......++++ ++|+|++||++|.+++++.+..+++.++.++.   .+++++|||++|.+..    .++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~i-~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~  317 (330)
T PRK10749        239 HWVRESILAGEQVLAGAGDI-TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSV  317 (330)
T ss_pred             HHHHHHHHHHHHHHhhccCC-CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHH
Confidence            000000000 1123456778 99999999999999999999999999987653   4589999999999876    2678


Q ss_pred             HHHHHHHHHHHh
Q psy463          777 FYHTLERFLDSC  788 (790)
Q Consensus       777 ~~~~i~~fl~~~  788 (790)
                      +++.|.+||+++
T Consensus       318 v~~~i~~fl~~~  329 (330)
T PRK10749        318 ALNAIVDFFNRH  329 (330)
T ss_pred             HHHHHHHHHhhc
Confidence            999999999875

>PLN02652 hydrolase; alpha/beta fold family protein

Probab=99.74  E-value=1.2e-16  Score=168.24  Aligned_cols=272  Identities=13%  Similarity=0.087  Sum_probs=157.4

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      ....+...++..+.+..+.|..     ....|+||++||.++..   ..|. .+. ..++++||.|+++|+||+|.+...
T Consensus       111 ~~~~~~~~~~~~l~~~~~~p~~-----~~~~~~Vl~lHG~~~~~---~~~~-~~a-~~L~~~Gy~V~~~D~rGhG~S~~~  180 (395)
T PLN02652        111 ATSLFYGARRNALFCRSWAPAA-----GEMRGILIIIHGLNEHS---GRYL-HFA-KQLTSCGFGVYAMDWIGHGGSDGL  180 (395)
T ss_pred             EEEEEECCCCCEEEEEEecCCC-----CCCceEEEEECCchHHH---HHHH-HHH-HHHHHCCCEEEEeCCCCCCCCCCC
Confidence            4456777788899999998863     33467999999987652   2222 233 334458999999999998865432


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEeCCCCCccccccc
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~~~~~~~~~~~~~  628 (790)
                      ..   +........+|+.++++++....+   ..+++|+||||||.+++.++. +|.  ..++++++.+|......... 
T Consensus       181 ~~---~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~-  252 (395)
T PLN02652        181 HG---YVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP-  252 (395)
T ss_pred             CC---CCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH-
Confidence            11   000111235677777887765322   358999999999999998765 553  36889999988754321100 


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChh-hHHHHHHHHHhcCcchhcccccCCCCcCCc
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIMFQSQRYMGLPTFEDN  707 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  707 (790)
                      .....          ..        ....+  .|.+.+.+......+.. +.........  ++.    .+.+.......
T Consensus       253 ~~~~~----------~~--------l~~~~--~p~~~~~~~~~~~~~~s~~~~~~~~~~~--dp~----~~~g~i~~~~~  306 (395)
T PLN02652        253 IVGAV----------AP--------IFSLV--APRFQFKGANKRGIPVSRDPAALLAKYS--DPL----VYTGPIRVRTG  306 (395)
T ss_pred             HHHHH----------HH--------HHHHh--CCCCcccCcccccCCcCCCHHHHHHHhc--CCC----cccCCchHHHH
Confidence            00000          00        00000  00000000000000000 0001111000  100    00000000000


Q ss_pred             chhhhhh-hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHH
Q psy463          708 LEGYKIA-ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERF  784 (790)
Q Consensus       708 ~~~~~~~-~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~f  784 (790)
                      ....+.. .....+.++ ++|+|++||++|.++|++.++.+++.+...  .+++++||+++|.+..  .++++++.+.+|
T Consensus       307 ~~~~~~~~~l~~~L~~I-~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~--~k~l~~~~ga~H~l~~e~~~e~v~~~I~~F  383 (395)
T PLN02652        307 HEILRISSYLTRNFKSV-TVPFMVLHGTADRVTDPLASQDLYNEAASR--HKDIKLYDGFLHDLLFEPEREEVGRDIIDW  383 (395)
T ss_pred             HHHHHHHHHHHhhcccC-CCCEEEEEeCCCCCCCHHHHHHHHHhcCCC--CceEEEECCCeEEeccCCCHHHHHHHHHHH
Confidence            0000000 112456778 999999999999999999999999887653  3478889999999865  688999999999


Q ss_pred             HHHhh
Q psy463          785 LDSCF  789 (790)
Q Consensus       785 l~~~l  789 (790)
                      |+.++
T Consensus       384 L~~~~  388 (395)
T PLN02652        384 MEKRL  388 (395)
T ss_pred             HHHHh
Confidence            99875

>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway

Probab=99.74  E-value=5e-17  Score=159.14  Aligned_cols=202  Identities=16%  Similarity=0.148  Sum_probs=135.1

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC---ChhhhHhhhhcc-
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL---KGNTLKYAGYRR-  558 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~---~g~~~~~~~~~~-  558 (790)
                      +.+++..|.+     .++.|.||++|+..|-.    .+...+... ++++||.|++||+-+...   ............ 
T Consensus         1 ~~ay~~~P~~-----~~~~~~Vvv~~d~~G~~----~~~~~~ad~-lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~   70 (218)
T PF01738_consen    1 IDAYVARPEG-----GGPRPAVVVIHDIFGLN----PNIRDLADR-LAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMREL   70 (218)
T ss_dssp             EEEEEEEETT-----SSSEEEEEEE-BTTBS-----HHHHHHHHH-HHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHC
T ss_pred             CeEEEEeCCC-----CCCCCEEEEEcCCCCCc----hHHHHHHHH-HHhcCCCEEecccccCCCCCccchhhHHHHHHHH
Confidence            4678888974     36789999999977652    112223334 445899999999764333   111100111111 


Q ss_pred             ---CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcC
Q psy463          559 ---LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMG  635 (790)
Q Consensus       559 ---~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g  635 (790)
                         .......|+.++++++.+ .+.++..||+++|+|+||.+++.++...  ..++++++..|.....            
T Consensus        71 ~~~~~~~~~~~~~aa~~~l~~-~~~~~~~kig~vGfc~GG~~a~~~a~~~--~~~~a~v~~yg~~~~~------------  135 (218)
T PF01738_consen   71 FAPRPEQVAADLQAAVDYLRA-QPEVDPGKIGVVGFCWGGKLALLLAARD--PRVDAAVSFYGGSPPP------------  135 (218)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHC-TTTCEEEEEEEEEETHHHHHHHHHHCCT--TTSSEEEEES-SSSGG------------
T ss_pred             HhhhHHHHHHHHHHHHHHHHh-ccccCCCcEEEEEEecchHHhhhhhhhc--cccceEEEEcCCCCCC------------
Confidence               112345777888999988 6667889999999999999999999865  3788888877710000            


Q ss_pred             CCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhh
Q psy463          636 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAA  715 (790)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  715 (790)
                                                                            .                         
T Consensus       136 ------------------------------------------------------~-------------------------  136 (218)
T PF01738_consen  136 ------------------------------------------------------P-------------------------  136 (218)
T ss_dssp             ------------------------------------------------------G-------------------------
T ss_pred             ------------------------------------------------------c-------------------------
Confidence                                                                  0                         


Q ss_pred             hhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC---------cchHHHHHHHHHHH
Q psy463          716 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG---------VRPHFYHTLERFLD  786 (790)
Q Consensus       716 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~---------~~~~~~~~i~~fl~  786 (790)
                      +.....++ ++|+|+++|++|+.++.+....+.+.|++++.++++.+|||++|+|..         ..++.++.+.+||+
T Consensus       137 ~~~~~~~~-~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~  215 (218)
T PF01738_consen  137 PLEDAPKI-KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFK  215 (218)
T ss_dssp             HHHHGGG---S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHC
T ss_pred             chhhhccc-CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHH
Confidence            00345567 899999999999999999999999999999999999999999999986         23467899999999


Q ss_pred             Hhh
Q psy463          787 SCF  789 (790)
Q Consensus       787 ~~l  789 (790)
                      +||
T Consensus       216 ~~L  218 (218)
T PF01738_consen  216 RHL  218 (218)
T ss_dssp             C--
T ss_pred             hcC
Confidence            987

Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.

>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins

Probab=99.74  E-value=1e-16  Score=162.75  Aligned_cols=249  Identities=19%  Similarity=0.134  Sum_probs=150.7

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ....++|.+.+|..|.|++++|.+    ..++.|+||.+||.++...   .+.  .. ..++..||+|+.+|.||.++..
T Consensus        55 ~vy~v~f~s~~g~~V~g~l~~P~~----~~~~~Pavv~~hGyg~~~~---~~~--~~-~~~a~~G~~vl~~d~rGqg~~~  124 (320)
T PF05448_consen   55 EVYDVSFESFDGSRVYGWLYRPKN----AKGKLPAVVQFHGYGGRSG---DPF--DL-LPWAAAGYAVLAMDVRGQGGRS  124 (320)
T ss_dssp             EEEEEEEEEGGGEEEEEEEEEES-----SSSSEEEEEEE--TT--GG---GHH--HH-HHHHHTT-EEEEE--TTTSSSS
T ss_pred             EEEEEEEEccCCCEEEEEEEecCC----CCCCcCEEEEecCCCCCCC---Ccc--cc-cccccCCeEEEEecCCCCCCCC
Confidence            356788888899999999999985    3578999999999876521   111  11 1234589999999999977422


Q ss_pred             hhhHh------hhhccCCc----------cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEE
Q psy463          549 NTLKY------AGYRRLGT----------VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKC  612 (790)
Q Consensus       549 ~~~~~------~~~~~~~~----------~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~  612 (790)
                      .....      ..+...|.          ..+.|+..+++++.+ ++.+|.+||+++|.|+||.+++.++..++  ++++
T Consensus       125 ~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~s-lpevD~~rI~v~G~SqGG~lal~~aaLd~--rv~~  201 (320)
T PF05448_consen  125 PDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRS-LPEVDGKRIGVTGGSQGGGLALAAAALDP--RVKA  201 (320)
T ss_dssp             -B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHT-STTEEEEEEEEEEETHHHHHHHHHHHHSS--T-SE
T ss_pred             CCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHh-CCCcCcceEEEEeecCchHHHHHHHHhCc--cccE
Confidence            22110      00000111          236889999999998 89999999999999999999999999875  6888


Q ss_pred             EEEeCCC-CCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCc
Q psy463          613 GISVAPV-TDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI  691 (790)
Q Consensus       613 ~v~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~  691 (790)
                      +++..|. .++...   +....-..+  ......|...        .            |  .......+.++.|.-.+.
T Consensus       202 ~~~~vP~l~d~~~~---~~~~~~~~~--y~~~~~~~~~--------~------------d--~~~~~~~~v~~~L~Y~D~  254 (320)
T PF05448_consen  202 AAADVPFLCDFRRA---LELRADEGP--YPEIRRYFRW--------R------------D--PHHEREPEVFETLSYFDA  254 (320)
T ss_dssp             EEEESESSSSHHHH---HHHT--STT--THHHHHHHHH--------H------------S--CTHCHHHHHHHHHHTT-H
T ss_pred             EEecCCCccchhhh---hhcCCcccc--HHHHHHHHhc--------c------------C--CCcccHHHHHHHHhhhhH
Confidence            8888774 343211   000000000  0000111100        0            0  011222334444444444


Q ss_pred             chhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCC
Q psy463          692 MFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLI  771 (790)
Q Consensus       692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~  771 (790)
                      .                         +.+++| ++|+|+..|-.|.+||+......+..+..   ++++++||..+|...
T Consensus       255 ~-------------------------nfA~ri-~~pvl~~~gl~D~~cPP~t~fA~yN~i~~---~K~l~vyp~~~He~~  305 (320)
T PF05448_consen  255 V-------------------------NFARRI-KCPVLFSVGLQDPVCPPSTQFAAYNAIPG---PKELVVYPEYGHEYG  305 (320)
T ss_dssp             H-------------------------HHGGG---SEEEEEEETT-SSS-HHHHHHHHCC--S---SEEEEEETT--SSTT
T ss_pred             H-------------------------HHHHHc-CCCEEEEEecCCCCCCchhHHHHHhccCC---CeeEEeccCcCCCch
Confidence            3                         778899 99999999999999999999999998864   479999999999874


Q ss_pred             CcchHHHHHHHHHHHHh
Q psy463          772 GVRPHFYHTLERFLDSC  788 (790)
Q Consensus       772 ~~~~~~~~~i~~fl~~~  788 (790)
                        .....+...+||.+|
T Consensus       306 --~~~~~~~~~~~l~~~  320 (320)
T PF05448_consen  306 --PEFQEDKQLNFLKEH  320 (320)
T ss_dssp             --HHHHHHHHHHHHHH-
T ss_pred             --hhHHHHHHHHHHhcC
Confidence              233367888998875

Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....

>KOG1552|consensus

Probab=99.72  E-value=2.1e-16  Score=147.53  Aligned_cols=219  Identities=19%  Similarity=0.192  Sum_probs=159.3

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+..+...|..+.+..+.|+.      ...+++++.||.....  .  ....+...+....++.|+.+||+|.|.++
T Consensus        34 ~v~v~~~~t~rgn~~~~~y~~~~~------~~~~~lly~hGNa~Dl--g--q~~~~~~~l~~~ln~nv~~~DYSGyG~S~  103 (258)
T KOG1552|consen   34 FVEVFKVKTSRGNEIVCMYVRPPE------AAHPTLLYSHGNAADL--G--QMVELFKELSIFLNCNVVSYDYSGYGRSS  103 (258)
T ss_pred             ccceEEeecCCCCEEEEEEEcCcc------ccceEEEEcCCcccch--H--HHHHHHHHHhhcccceEEEEecccccccC
Confidence            455667777788899999998863      3458999999985442  1  11222333333458999999999987755


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~  628 (790)
                      ..-.+.       ..++|+.++.+||+++.+  ..++|+|+|+|+|...+..+|.+.|   .+++|+.+|+.+.....  
T Consensus       104 G~psE~-------n~y~Di~avye~Lr~~~g--~~~~Iil~G~SiGt~~tv~Lasr~~---~~alVL~SPf~S~~rv~--  169 (258)
T KOG1552|consen  104 GKPSER-------NLYADIKAVYEWLRNRYG--SPERIILYGQSIGTVPTVDLASRYP---LAAVVLHSPFTSGMRVA--  169 (258)
T ss_pred             CCcccc-------cchhhHHHHHHHHHhhcC--CCceEEEEEecCCchhhhhHhhcCC---cceEEEeccchhhhhhh--
Confidence            442222       568999999999998554  5789999999999999999999886   78999999987653210  


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                             .+    ....+                                                              
T Consensus       170 -------~~----~~~~~--------------------------------------------------------------  176 (258)
T KOG1552|consen  170 -------FP----DTKTT--------------------------------------------------------------  176 (258)
T ss_pred             -------cc----CcceE--------------------------------------------------------------
Confidence                   00    00000                                                              


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC  788 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~  788 (790)
                      -.+..+...+.+..+ ++|+|++||+.|+++++.++..|++.++++   ++..++.|+||.......++.+.+..|+..-
T Consensus       177 ~~~d~f~~i~kI~~i-~~PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~  252 (258)
T KOG1552|consen  177 YCFDAFPNIEKISKI-TCPVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGAGHNDIELYPEYIEHLRRFISSV  252 (258)
T ss_pred             EeeccccccCcceec-cCCEEEEecccCceecccccHHHHHhcccc---CCCcEEecCCCcccccCHHHHHHHHHHHHHh
Confidence            000000112567778 999999999999999999999999999875   5777888999987766678888888888653

>COG2267 PldB Lysophospholipase [Lipid metabolism]

Probab=99.71  E-value=2.1e-16  Score=159.88  Aligned_cols=269  Identities=15%  Similarity=0.096  Sum_probs=155.3

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      ....+...||..+.+..+.+..      .+..+||++||......   .  .....+.+..+||.|+..|.||+|.+.. 
T Consensus        10 ~~~~~~~~d~~~~~~~~~~~~~------~~~g~Vvl~HG~~Eh~~---r--y~~la~~l~~~G~~V~~~D~RGhG~S~r-   77 (298)
T COG2267          10 TEGYFTGADGTRLRYRTWAAPE------PPKGVVVLVHGLGEHSG---R--YEELADDLAARGFDVYALDLRGHGRSPR-   77 (298)
T ss_pred             ccceeecCCCceEEEEeecCCC------CCCcEEEEecCchHHHH---H--HHHHHHHHHhCCCEEEEecCCCCCCCCC-
Confidence            3446667799999999998764      22279999999987632   2  2223345556999999999999988752 


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCC-cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc--ccc
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPY-IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY--YDT  627 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~-~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~--~~~  627 (790)
                       ...  +..  ..+++....++.+.+.... ....+++|+||||||.+++.++.+++ ..++++|+.+|+.....  ...
T Consensus        78 -~~r--g~~--~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~-~~i~~~vLssP~~~l~~~~~~~  151 (298)
T COG2267          78 -GQR--GHV--DSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP-PRIDGLVLSSPALGLGGAILRL  151 (298)
T ss_pred             -CCc--CCc--hhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC-ccccEEEEECccccCChhHHHH
Confidence             000  111  1234444444443332110 22468999999999999999999888 59999999999877652  000


Q ss_pred             cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCcc---ChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463          628 IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV---HFQQSMMLAKSLQHADIMFQSQRYMGLPTF  704 (790)
Q Consensus       628 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v---~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  704 (790)
                      ..........                  .++  .|-+.+......++   .........+........     ..+.+. 
T Consensus       152 ~~~~~~~~~~------------------~~~--~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~-----~~~~~~-  205 (298)
T COG2267         152 ILARLALKLL------------------GRI--RPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLI-----GVGGPV-  205 (298)
T ss_pred             HHHHHhcccc------------------ccc--ccccccCcccccCcCcchhhcCHHHHHHHhcCCcc-----ccCCcc-
Confidence            0000000000                  000  00000000000000   000111111111111100     000000 


Q ss_pred             CCcchhhhhh------hhhhhhhccCCccEEEEecCCCcccc-hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cc-
Q psy463          705 EDNLEGYKIA------ALNNKVDRIRDKQYLLVHGTMDDNVH-FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VR-  774 (790)
Q Consensus       705 ~~~~~~~~~~------~~~~~~~~i~~~P~Lii~G~~D~~v~-~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~-  774 (790)
                         ..++...      .......++ ++|+|+++|+.|.+++ .+...++++.+....  +++++|||+.|.+..  +. 
T Consensus       206 ---~~w~~~~~~a~~~~~~~~~~~~-~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~--~~~~~~~g~~He~~~E~~~~  279 (298)
T COG2267         206 ---SRWVDLALLAGRVPALRDAPAI-ALPVLLLQGGDDRVVDNVEGLARFFERAGSPD--KELKVIPGAYHELLNEPDRA  279 (298)
T ss_pred             ---HHHHHHHHHhhcccchhccccc-cCCEEEEecCCCccccCcHHHHHHHHhcCCCC--ceEEecCCcchhhhcCcchH
Confidence               0000000      011335566 8999999999999999 677777777665543  589999999999987  55 


Q ss_pred             -hHHHHHHHHHHHHhh
Q psy463          775 -PHFYHTLERFLDSCF  789 (790)
Q Consensus       775 -~~~~~~i~~fl~~~l  789 (790)
                       +++++.+.+||.+++
T Consensus       280 r~~~~~~~~~~l~~~~  295 (298)
T COG2267         280 REEVLKDILAWLAEAL  295 (298)
T ss_pred             HHHHHHHHHHHHHhhc
Confidence             899999999999875

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=99.70  E-value=3.1e-15  Score=157.30  Aligned_cols=234  Identities=15%  Similarity=0.155  Sum_probs=164.1

Q ss_pred             cEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCC
Q psy463          143 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  222 (790)
Q Consensus       143 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  222 (790)
                      .+||+.|-++-      ....++...+.+. ...|.+++.+ +.|++.....        ..+||++++++++.      
T Consensus       173 ~~l~~~D~dg~------~~~~l~~~~~~~~-~p~ws~~~~~-~~y~~f~~~~--------~~~i~~~~l~~g~~------  230 (425)
T COG0823         173 YELALGDYDGY------NQQKLTDSGSLIL-TPAWSPDGKK-LAYVSFELGG--------CPRIYYLDLNTGKR------  230 (425)
T ss_pred             ceEEEEccCCc------ceeEecccCccee-ccccCcCCCc-eEEEEEecCC--------CceEEEEeccCCcc------
Confidence            38999988733      2444555544333 3466666655 5555432111        16899999999874      


Q ss_pred             ccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCce
Q psy463          223 VPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHL  302 (790)
Q Consensus       223 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~  302 (790)
                      ..+.                 ...+....|+|||||+.++++....+..+||++|+.++..++|+...+      ....|
T Consensus       231 ~~i~-----------------~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~g------i~~~P  287 (425)
T COG0823         231 PVIL-----------------NFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFG------INTSP  287 (425)
T ss_pred             ceee-----------------ccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCc------cccCc
Confidence            2333                 345666789999999955554433467789999999998887776543      24589


Q ss_pred             eEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCc
Q psy463          303 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPI  382 (790)
Q Consensus       303 ~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~  382 (790)
                      .|||||++|+|..    ++.|      ..+||+++++++.      .+++|.....-. .+.|||||++|+|.+..+.  
T Consensus       288 s~spdG~~ivf~S----dr~G------~p~I~~~~~~g~~------~~riT~~~~~~~-~p~~SpdG~~i~~~~~~~g--  348 (425)
T COG0823         288 SWSPDGSKIVFTS----DRGG------RPQIYLYDLEGSQ------VTRLTFSGGGNS-NPVWSPDGDKIVFESSSGG--  348 (425)
T ss_pred             cCCCCCCEEEEEe----CCCC------CcceEEECCCCCc------eeEeeccCCCCc-CccCCCCCCEEEEEeccCC--
Confidence            9999999999764    4788      7899999999988      788886543323 5899999999999985422  


Q ss_pred             eEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          383 VQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       383 ~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      ...+...++.+. ...++++.        ......++++++|+.++|+....+-+.++..+..+...
T Consensus       349 ~~~i~~~~~~~~-~~~~~lt~--------~~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~g~~~  406 (425)
T COG0823         349 QWDIDKNDLASG-GKIRILTS--------TYLNESPSWAPNGRMIMFSSGQGGGSVLSLVSLDGRVS  406 (425)
T ss_pred             ceeeEEeccCCC-CcEEEccc--------cccCCCCCcCCCCceEEEeccCCCCceEEEeeccceeE
Confidence            267777777652 22555554        33455689999999999998777777777777766544

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.70  E-value=6.1e-16  Score=168.46  Aligned_cols=226  Identities=22%  Similarity=0.281  Sum_probs=150.2

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      ...|.|||||++|||++...+...+|++.+.++.         ...+...     .                        
T Consensus       192 ~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~---------~~~~~~~-----~------------------------  233 (417)
T TIGR02800       192 ILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQ---------REKVASF-----P------------------------  233 (417)
T ss_pred             eecccCCCCCCEEEEEEcCCCCcEEEEEECCCCC---------EEEeecC-----C------------------------
Confidence            4578899999999999887777788888887663         1111000     0                        


Q ss_pred             CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463           90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF  169 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~  169 (790)
                                         +....|.|+|||+.|+|.....+          ..+||+++++++.      ..+++.+..
T Consensus       234 -------------------~~~~~~~~spDg~~l~~~~~~~~----------~~~i~~~d~~~~~------~~~l~~~~~  278 (417)
T TIGR02800       234 -------------------GMNGAPAFSPDGSKLAVSLSKDG----------NPDIYVMDLDGKQ------LTRLTNGPG  278 (417)
T ss_pred             -------------------CCccceEECCCCCEEEEEECCCC----------CccEEEEECCCCC------EEECCCCCC
Confidence                               00123689999999999865433          2389999998774      455655432


Q ss_pred             EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEE
Q psy463          170 TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVL  249 (790)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~  249 (790)
                      ... -..|+++++. ++|.+....         ..+||++++++++      ..+++                 ....+.
T Consensus       279 ~~~-~~~~s~dg~~-l~~~s~~~g---------~~~iy~~d~~~~~------~~~l~-----------------~~~~~~  324 (417)
T TIGR02800       279 IDT-EPSWSPDGKS-IAFTSDRGG---------SPQIYMMDADGGE------VRRLT-----------------FRGGYN  324 (417)
T ss_pred             CCC-CEEECCCCCE-EEEEECCCC---------CceEEEEECCCCC------EEEee-----------------cCCCCc
Confidence            221 2356666553 666654321         1589999998876      33444                 334455


Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      ..+.|||||+.+++..+..+..+|+++++.++..+.++....       ...|.|||||+.|++...    ..+      
T Consensus       325 ~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-------~~~p~~spdg~~l~~~~~----~~~------  387 (417)
T TIGR02800       325 ASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERVLTDTGL-------DESPSFAPNGRMILYATT----RGG------  387 (417)
T ss_pred             cCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEEccCCCC-------CCCceECCCCCEEEEEEe----CCC------
Confidence            678999999987777776666789999999987776654211       347899999999986554    455      


Q ss_pred             ccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeee
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWD  366 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s  366 (790)
                      ...|++++.+++.      .+.++.....+.. +.|+
T Consensus       388 ~~~l~~~~~~g~~------~~~~~~~~g~~~~-~~ws  417 (417)
T TIGR02800       388 RGVLGLVSTDGRF------RARLPLGNGDVRE-PAWS  417 (417)
T ss_pred             cEEEEEEECCCce------eeECCCCCCCcCC-CCCC
Confidence            5688988877765      6666654333333 5563

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.68  E-value=2.6e-15  Score=146.12  Aligned_cols=212  Identities=18%  Similarity=0.148  Sum_probs=156.5

Q ss_pred             EEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhh
Q psy463          472 YMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTL  551 (790)
Q Consensus       472 ~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~  551 (790)
                      .+++..+| .++.+++..|.+     ..+.|+||++|+..+..   +.  ..-....++..||.|++||+-+..+.....
T Consensus         4 ~v~~~~~~-~~~~~~~a~P~~-----~~~~P~VIv~hei~Gl~---~~--i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~   72 (236)
T COG0412           4 DVTIPAPD-GELPAYLARPAG-----AGGFPGVIVLHEIFGLN---PH--IRDVARRLAKAGYVVLAPDLYGRQGDPTDI   72 (236)
T ss_pred             ceEeeCCC-ceEeEEEecCCc-----CCCCCEEEEEecccCCc---hH--HHHHHHHHHhCCcEEEechhhccCCCCCcc
Confidence            45666655 889999999985     34449999999977752   21  222334455689999999976522211111


Q ss_pred             H----hhhh----ccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463          552 K----YAGY----RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       552 ~----~~~~----~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                      .    ....    .........|+.+++++|.+ ++.++..||+++|+||||.+++.++.+.|  .++++++..|..-. 
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~-~~~~~~~~ig~~GfC~GG~~a~~~a~~~~--~v~a~v~fyg~~~~-  148 (236)
T COG0412          73 EDEPAELETGLVERVDPAEVLADIDAALDYLAR-QPQVDPKRIGVVGFCMGGGLALLAATRAP--EVKAAVAFYGGLIA-  148 (236)
T ss_pred             cccHHHHhhhhhccCCHHHHHHHHHHHHHHHHh-CCCCCCceEEEEEEcccHHHHHHhhcccC--CccEEEEecCCCCC-
Confidence            1    0000    11114568899999999998 77789999999999999999999999655  78888887763110 


Q ss_pred             cccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCC
Q psy463          624 YYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPT  703 (790)
Q Consensus       624 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  703 (790)
                                                                                        ...           
T Consensus       149 ------------------------------------------------------------------~~~-----------  151 (236)
T COG0412         149 ------------------------------------------------------------------DDT-----------  151 (236)
T ss_pred             ------------------------------------------------------------------Ccc-----------
Confidence                                                                              000           


Q ss_pred             cCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----------
Q psy463          704 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----------  772 (790)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----------  772 (790)
                                    ....++ ++|+|+.+|+.|..+|......+.+++.++++.+++.+|+++.|.|..           
T Consensus       152 --------------~~~~~~-~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~  216 (236)
T COG0412         152 --------------ADAPKI-KVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDA  216 (236)
T ss_pred             --------------cccccc-cCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCH
Confidence                          123456 899999999999999999999999999999888999999999999883           


Q ss_pred             -cchHHHHHHHHHHHHhhC
Q psy463          773 -VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       773 -~~~~~~~~i~~fl~~~l~  790 (790)
                       ..+..++.+.+||+++|.
T Consensus       217 ~aa~~a~~~~~~ff~~~~~  235 (236)
T COG0412         217 AAAEDAWQRVLAFFKRLLG  235 (236)
T ss_pred             HHHHHHHHHHHHHHHHhcc
Confidence             234678999999998863

>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.68  E-value=1.2e-15  Score=141.40  Aligned_cols=244  Identities=19%  Similarity=0.132  Sum_probs=159.0

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ++..++|++.+|.+|.||+.+|..    .+++.|+||..||..+...   .|. .+.  .++..||+|+.+|.||-+++.
T Consensus        55 e~ydvTf~g~~g~rI~gwlvlP~~----~~~~~P~vV~fhGY~g~~g---~~~-~~l--~wa~~Gyavf~MdvRGQg~~~  124 (321)
T COG3458          55 EVYDVTFTGYGGARIKGWLVLPRH----EKGKLPAVVQFHGYGGRGG---EWH-DML--HWAVAGYAVFVMDVRGQGSSS  124 (321)
T ss_pred             EEEEEEEeccCCceEEEEEEeecc----cCCccceEEEEeeccCCCC---Ccc-ccc--cccccceeEEEEecccCCCcc
Confidence            355678899899999999999986    4478999999999877632   121 111  123479999999999976652


Q ss_pred             hhhHhhhhc-------cCCc----------cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceE
Q psy463          549 NTLKYAGYR-------RLGT----------VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFK  611 (790)
Q Consensus       549 ~~~~~~~~~-------~~~~----------~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~  611 (790)
                      .+-.....+       ..|.          ..+.|...+++-+.+ ++.+|..||++.|.|.||.+++.++...|  +++
T Consensus       125 ~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~s-l~~vde~Ri~v~G~SqGGglalaaaal~~--rik  201 (321)
T COG3458         125 QDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILAS-LDEVDEERIGVTGGSQGGGLALAAAALDP--RIK  201 (321)
T ss_pred             ccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhc-cCccchhheEEeccccCchhhhhhhhcCh--hhh
Confidence            210010000       0011          236788899999888 89999999999999999999999998775  888


Q ss_pred             EEEEeCCCCC-cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcC
Q psy463          612 CGISVAPVTD-WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD  690 (790)
Q Consensus       612 ~~v~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~  690 (790)
                      ++++..|... +..        .+..+    ....|.+.     ...++      .|        -..-.+.++.|.-.+
T Consensus       202 ~~~~~~Pfl~df~r--------~i~~~----~~~~ydei-----~~y~k------~h--------~~~e~~v~~TL~yfD  250 (321)
T COG3458         202 AVVADYPFLSDFPR--------AIELA----TEGPYDEI-----QTYFK------RH--------DPKEAEVFETLSYFD  250 (321)
T ss_pred             cccccccccccchh--------heeec----ccCcHHHH-----HHHHH------hc--------CchHHHHHHHHhhhh
Confidence            8888888532 211        00000    00111110     00000      00        001122333333333


Q ss_pred             cchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcC
Q psy463          691 IMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGL  770 (790)
Q Consensus       691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~  770 (790)
                      ..                         +.+.++ +.|+|+..|-.|++||+...-.++.++...   +...+||.-+|.-
T Consensus       251 ~~-------------------------n~A~Ri-K~pvL~svgL~D~vcpPstqFA~yN~l~~~---K~i~iy~~~aHe~  301 (321)
T COG3458         251 IV-------------------------NLAARI-KVPVLMSVGLMDPVCPPSTQFAAYNALTTS---KTIEIYPYFAHEG  301 (321)
T ss_pred             hh-------------------------hHHHhh-ccceEEeecccCCCCCChhhHHHhhcccCC---ceEEEeecccccc
Confidence            33                         667888 999999999999999999999999988754   4677888878976


Q ss_pred             CCcchHHHHHHHHHHHH
Q psy463          771 IGVRPHFYHTLERFLDS  787 (790)
Q Consensus       771 ~~~~~~~~~~i~~fl~~  787 (790)
                      ..  ....+.+..|+..
T Consensus       302 ~p--~~~~~~~~~~l~~  316 (321)
T COG3458         302 GP--GFQSRQQVHFLKI  316 (321)
T ss_pred             Cc--chhHHHHHHHHHh
Confidence            53  2333445556554

>PLN02511 hydrolase

Probab=99.67  E-value=1.8e-15  Score=160.53  Aligned_cols=281  Identities=14%  Similarity=0.065  Sum_probs=155.0

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+...+...||..+....+.+....  .....|+||++||..++..  ..|...+...++ ++||.|+++|+||+|++..
T Consensus        71 ~~re~l~~~DG~~~~ldw~~~~~~~--~~~~~p~vvllHG~~g~s~--~~y~~~~~~~~~-~~g~~vv~~d~rG~G~s~~  145 (388)
T PLN02511         71 YRRECLRTPDGGAVALDWVSGDDRA--LPADAPVLILLPGLTGGSD--DSYVRHMLLRAR-SKGWRVVVFNSRGCADSPV  145 (388)
T ss_pred             eeEEEEECCCCCEEEEEecCccccc--CCCCCCEEEEECCCCCCCC--CHHHHHHHHHHH-HCCCEEEEEecCCCCCCCC
Confidence            3445677789988876544332111  2234689999999877632  223222333344 4899999999999886532


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC-ceEEEEEeCCCCCccccccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN-VFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~-~~~~~v~~~~~~~~~~~~~~  628 (790)
                      .    ....+.....+|+.++++++..+++   ..++.++||||||.+++.++.++++. .+++++++++..+.......
T Consensus       146 ~----~~~~~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~  218 (388)
T PLN02511        146 T----TPQFYSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADED  218 (388)
T ss_pred             C----CcCEEcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHH
Confidence            1    0111222457899999999987444   46899999999999999999988863 26666666655443110000


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCC-cEEE--EeecCCCc-cChhhHH-HHHHHHHhcCcchhcccccCCCC
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDK-QYLL--VHGTMDDN-VHFQQSM-MLAKSLQHADIMFQSQRYMGLPT  703 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-p~l~--~~g~~d~~-v~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~  703 (790)
                      +...+         ...|...-... ..++... ..++  +.+..+.. +...... ++-+.+..           ....
T Consensus       219 ~~~~~---------~~~y~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~-----------~~~g  277 (388)
T PLN02511        219 FHKGF---------NNVYDKALAKA-LRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTR-----------VSFG  277 (388)
T ss_pred             HhccH---------HHHHHHHHHHH-HHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhh-----------hcCC
Confidence            00000         00010000000 0000000 0000  00000000 0000000 00000000           0011


Q ss_pred             cCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhh-HHHHHHHHhcCCceEEEEcCCCCCcCCC-cchH-----
Q psy463          704 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQS-MMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPH-----  776 (790)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~-~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~-----  776 (790)
                      +.....+|...+....+.+| ++|+|+|+|.+|+++|.... ..+.+.    ...+++++++++||..+. .+..     
T Consensus       278 f~~~~~yy~~~s~~~~L~~I-~vPtLiI~g~dDpi~p~~~~~~~~~~~----~p~~~l~~~~~gGH~~~~E~p~~~~~~~  352 (388)
T PLN02511        278 FKSVDAYYSNSSSSDSIKHV-RVPLLCIQAANDPIAPARGIPREDIKA----NPNCLLIVTPSGGHLGWVAGPEAPFGAP  352 (388)
T ss_pred             CCCHHHHHHHcCchhhhccC-CCCeEEEEcCCCCcCCcccCcHhHHhc----CCCEEEEECCCcceeccccCCCCCCCCc
Confidence            23334456667777889999 99999999999999997654 233332    234689999999998765 3332     


Q ss_pred             -HHHHHHHHHHHh
Q psy463          777 -FYHTLERFLDSC  788 (790)
Q Consensus       777 -~~~~i~~fl~~~  788 (790)
                       +.+.+.+||+..
T Consensus       353 w~~~~i~~Fl~~~  365 (388)
T PLN02511        353 WTDPVVMEFLEAL  365 (388)
T ss_pred             cHHHHHHHHHHHH
Confidence             468888998765

>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional

Probab=99.66  E-value=1e-14  Score=165.28  Aligned_cols=234  Identities=19%  Similarity=0.173  Sum_probs=146.7

Q ss_pred             HHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHh-CCCcC------------CCceEEEEech
Q psy463          527 YLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN-LPYID------------KTRTAIWGWSY  593 (790)
Q Consensus       527 ~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~~d------------~~ri~i~G~S~  593 (790)
                      .+++.+||+|+.+|.||.++++..+.     .++..+.+|..++|+|+..+ ..++|            ..||+++|.||
T Consensus       273 ~~~~~rGYaVV~~D~RGtg~SeG~~~-----~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY  347 (767)
T PRK05371        273 DYFLPRGFAVVYVSGIGTRGSDGCPT-----TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY  347 (767)
T ss_pred             HHHHhCCeEEEEEcCCCCCCCCCcCc-----cCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence            44555899999999999987665432     23346789999999999852 11223            36999999999


Q ss_pred             HHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCc
Q psy463          594 GGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  673 (790)
Q Consensus       594 GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~  673 (790)
                      ||++++.+|...|+ .++++|..+++++|..+.  +....+..+      ..|...........+... . ...+  +..
T Consensus       348 ~G~~~~~aAa~~pp-~LkAIVp~a~is~~yd~y--r~~G~~~~~------~g~~ged~d~l~~~~~~r-~-~~~~--~~~  414 (767)
T PRK05371        348 LGTLPNAVATTGVE-GLETIIPEAAISSWYDYY--RENGLVRAP------GGYQGEDLDVLAELTYSR-N-LLAG--DYL  414 (767)
T ss_pred             HHHHHHHHHhhCCC-cceEEEeeCCCCcHHHHh--hcCCceecc------CCcCCcchhhHHHHhhhc-c-cCcc--hhh
Confidence            99999999887765 899999999998874321  110000000      011000000000000000 0 0000  000


Q ss_pred             cChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHh
Q psy463          674 VHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQH  753 (790)
Q Consensus       674 v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~  753 (790)
                      ............+...         .. ..-......|...++...++++ ++|+|++||..|.++++.++.+++++|++
T Consensus       415 ~~~~~~~~~~~~~~~~---------~~-~~~~~y~~fW~~rn~~~~~~kI-kvPvLlIhGw~D~~V~~~~s~~ly~aL~~  483 (767)
T PRK05371        415 RHNEACEKLLAELTAA---------QD-RKTGDYNDFWDDRNYLKDADKI-KASVLVVHGLNDWNVKPKQVYQWWDALPE  483 (767)
T ss_pred             cchHHHHHHHhhhhhh---------hh-hcCCCccHHHHhCCHhhHhhCC-CCCEEEEeeCCCCCCChHHHHHHHHHHHh
Confidence            0000000000000000         00 0001223567777888899999 99999999999999999999999999999


Q ss_pred             cCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          754 ADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       754 ~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      ++++.++++.++ +|....  .+.++.+.+.+||+++|+
T Consensus       484 ~g~pkkL~l~~g-~H~~~~~~~~~d~~e~~~~Wfd~~Lk  521 (767)
T PRK05371        484 NGVPKKLFLHQG-GHVYPNNWQSIDFRDTMNAWFTHKLL  521 (767)
T ss_pred             cCCCeEEEEeCC-CccCCCchhHHHHHHHHHHHHHhccc
Confidence            998889877766 786544  566888999999999874

>PRK10985 putative hydrolase; Provisional

Probab=99.66  E-value=6.5e-15  Score=153.24  Aligned_cols=274  Identities=15%  Similarity=0.135  Sum_probs=153.3

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +...++..||..+.........    .....|+||++||.+++..  ..+...+.. .+.++||.|+++|+||+++....
T Consensus        32 ~~~~~~~~dg~~~~l~w~~~~~----~~~~~p~vll~HG~~g~~~--~~~~~~~~~-~l~~~G~~v~~~d~rG~g~~~~~  104 (324)
T PRK10985         32 YWQRLELPDGDFVDLAWSEDPA----QARHKPRLVLFHGLEGSFN--SPYAHGLLE-AAQKRGWLGVVMHFRGCSGEPNR  104 (324)
T ss_pred             ceeEEECCCCCEEEEecCCCCc----cCCCCCEEEEeCCCCCCCc--CHHHHHHHH-HHHHCCCEEEEEeCCCCCCCccC
Confidence            3345677788776544322111    2335689999999987521  122222333 34458999999999998754321


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC-ceEEEEEeCCCCCcccccccc
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN-VFKCGISVAPVTDWIYYDTIY  629 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~-~~~~~v~~~~~~~~~~~~~~~  629 (790)
                      ...    .+......|+..+++++.++++   ..+++++||||||.+++.++..++.+ .+++++++++..++..-....
T Consensus       105 ~~~----~~~~~~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~  177 (324)
T PRK10985        105 LHR----IYHSGETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRM  177 (324)
T ss_pred             Ccc----eECCCchHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHH
Confidence            111    1112347899999999987443   46899999999999888777766543 377777777765543211000


Q ss_pred             hhhhcCCCCccCchhhhhhc---cccchh-hhccCCcEEEEeecCCCccChhhH-----HHHHHHHHhcCcchhcccccC
Q psy463          630 SERYMGLPTFEDNLEGYKIA---ALNNKV-DRIRDKQYLLVHGTMDDNVHFQQS-----MMLAKSLQHADIMFQSQRYMG  700 (790)
Q Consensus       630 ~~~~~g~~~~~~~~~~~~~~---~~~~~~-~~~~~~p~l~~~g~~d~~v~~~~~-----~~l~~~l~~~~~~~~~~~~~~  700 (790)
                      ...+         ...|...   .+...+ ..+.     ...+..  .......     ...++.+..          ..
T Consensus       178 ~~~~---------~~~~~~~l~~~l~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~fd~~~~----------~~  231 (324)
T PRK10985        178 EQGF---------SRVYQRYLLNLLKANAARKLA-----AYPGTL--PINLAQLKSVRRLREFDDLIT----------AR  231 (324)
T ss_pred             hhhH---------HHHHHHHHHHHHHHHHHHHHH-----hccccc--cCCHHHHhcCCcHHHHhhhhe----------ec
Confidence            0000         0001100   000000 0000     001110  0011000     011111110          01


Q ss_pred             CCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--c---c-
Q psy463          701 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--V---R-  774 (790)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~---~-  774 (790)
                      ...+.....+|...+....++++ ++|+|+|+|+.|++++.+....+.+..    ..+++++++++||....  .   . 
T Consensus       232 ~~g~~~~~~~y~~~~~~~~l~~i-~~P~lii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~GH~~~~~g~~~~~~  306 (324)
T PRK10985        232 IHGFADAIDYYRQCSALPLLNQI-RKPTLIIHAKDDPFMTHEVIPKPESLP----PNVEYQLTEHGGHVGFVGGTLLKPQ  306 (324)
T ss_pred             cCCCCCHHHHHHHCChHHHHhCC-CCCEEEEecCCCCCCChhhChHHHHhC----CCeEEEECCCCCceeeCCCCCCCCC
Confidence            11234455667677777888999 999999999999999987776654332    24688899999997654  1   1 


Q ss_pred             hHHHHHHHHHHHHhh
Q psy463          775 PHFYHTLERFLDSCF  789 (790)
Q Consensus       775 ~~~~~~i~~fl~~~l  789 (790)
                      .-..+.+.+||+..+
T Consensus       307 ~w~~~~~~~~~~~~~  321 (324)
T PRK10985        307 MWLEQRIPDWLTTYL  321 (324)
T ss_pred             ccHHHHHHHHHHHhh
Confidence            234477788887654

>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase

Probab=99.65  E-value=4.2e-15  Score=152.72  Aligned_cols=244  Identities=14%  Similarity=0.062  Sum_probs=129.1

Q ss_pred             cEEEEEcCCCCccccccccccch--HHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDW--NLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~--~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      |.||++||.+.+.   ..|...+  ...++ +.||.|+++|+||+|.+......   ........+|    +..+++.  
T Consensus        31 ~~ivllHG~~~~~---~~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~----l~~~l~~--   97 (282)
T TIGR03343        31 EAVIMLHGGGPGA---GGWSNYYRNIGPFV-DAGYRVILKDSPGFNKSDAVVMD---EQRGLVNARA----VKGLMDA--   97 (282)
T ss_pred             CeEEEECCCCCch---hhHHHHHHHHHHHH-hCCCEEEEECCCCCCCCCCCcCc---ccccchhHHH----HHHHHHH--
Confidence            6799999987652   2333211  22333 46899999999998765432100   0000011223    3333332  


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch----hhhcCCCCccCchhhhhhccccchh
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS----ERYMGLPTFEDNLEGYKIAALNNKV  655 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~  655 (790)
                       ++.++++++||||||.+++.++.++|. +++++++.+|............    ..++.... ......+..       
T Consensus        98 -l~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------  167 (282)
T TIGR03343        98 -LDIEKAHLVGNSMGGATALNFALEYPD-RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYA-EPSYETLKQ-------  167 (282)
T ss_pred             -cCCCCeeEEEECchHHHHHHHHHhChH-hhceEEEECCCCCCccccccCchHHHHHHHHHhc-CCCHHHHHH-------
Confidence             446799999999999999999998875 8888888877532110000000    00000000 000000000       


Q ss_pred             hhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCC
Q psy463          656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTM  735 (790)
Q Consensus       656 ~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~  735 (790)
                       .+.   ....   ................+.. ... ....+...    .....+........++++ ++|+|+++|++
T Consensus       168 -~~~---~~~~---~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~----~~~~~~~~~~~~~~l~~i-~~Pvlli~G~~  233 (282)
T TIGR03343       168 -MLN---VFLF---DQSLITEELLQGRWENIQR-QPE-HLKNFLIS----SQKAPLSTWDVTARLGEI-KAKTLVTWGRD  233 (282)
T ss_pred             -HHh---hCcc---CcccCcHHHHHhHHHHhhc-CHH-HHHHHHHh----ccccccccchHHHHHhhC-CCCEEEEEccC
Confidence             000   0000   0000000000000000000 000 00000000    000000111122457788 99999999999


Q ss_pred             CcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          736 DDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       736 D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      |..++++.++++++.++.    ++++++|++||.+.. .++.+.+.+.+||+
T Consensus       234 D~~v~~~~~~~~~~~~~~----~~~~~i~~agH~~~~e~p~~~~~~i~~fl~  281 (282)
T TIGR03343       234 DRFVPLDHGLKLLWNMPD----AQLHVFSRCGHWAQWEHADAFNRLVIDFLR  281 (282)
T ss_pred             CCcCCchhHHHHHHhCCC----CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence            999999999998887764    488999999999988 88999999999986

Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.

>TIGR03611 RutD pyrimidine utilization protein D

Probab=99.65  E-value=3.3e-15  Score=151.23  Aligned_cols=243  Identities=17%  Similarity=0.148  Sum_probs=133.7

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      .+.|+||++||.+++.   ..|.  .....+. .+|.|+++|+||+|.+.....       ....+++....+..++++ 
T Consensus        11 ~~~~~iv~lhG~~~~~---~~~~--~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~i~~-   76 (257)
T TIGR03611        11 ADAPVVVLSSGLGGSG---SYWA--PQLDVLT-QRFHVVTYDHRGTGRSPGELP-------PGYSIAHMADDVLQLLDA-   76 (257)
T ss_pred             CCCCEEEEEcCCCcch---hHHH--HHHHHHH-hccEEEEEcCCCCCCCCCCCc-------ccCCHHHHHHHHHHHHHH-
Confidence            3458899999998762   2332  1223444 589999999999887543211       113355555555555542 


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccchh--hhcCCCCccCchhhhhhccccchh
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIYSE--RYMGLPTFEDNLEGYKIAALNNKV  655 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~  655 (790)
                        ++..++.++||||||.+++.++.++|+ .+++++.+++........ ..+..  .++...    ....+...      
T Consensus        77 --~~~~~~~l~G~S~Gg~~a~~~a~~~~~-~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------  143 (257)
T TIGR03611        77 --LNIERFHFVGHALGGLIGLQLALRYPE-RLLSLVLINAWSRPDPHTRRCFDVRIALLQHA----GPEAYVHA------  143 (257)
T ss_pred             --hCCCcEEEEEechhHHHHHHHHHHChH-HhHHheeecCCCCCChhHHHHHHHHHHHHhcc----Ccchhhhh------
Confidence              345789999999999999999998875 788888877754321100 00000  000000    00000000      


Q ss_pred             hhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCC
Q psy463          656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTM  735 (790)
Q Consensus       656 ~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~  735 (790)
                        .  ...+...-..+....         .+...... ....+.....................++++ ++|+|+++|++
T Consensus       144 --~--~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~  208 (257)
T TIGR03611       144 --Q--ALFLYPADWISENAA---------RLAADEAH-ALAHFPGKANVLRRINALEAFDVSARLDRI-QHPVLLIANRD  208 (257)
T ss_pred             --h--hhhhccccHhhccch---------hhhhhhhh-cccccCccHHHHHHHHHHHcCCcHHHhccc-CccEEEEecCc
Confidence              0  000000000000000         00000000 000000000000000001111222557788 99999999999


Q ss_pred             CcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          736 DDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       736 D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      |..+|++.++.+++.++.    .+++.++++||.+.. +++++.+.+.+||++
T Consensus       209 D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~  257 (257)
T TIGR03611       209 DMLVPYTQSLRLAAALPN----AQLKLLPYGGHASNVTDPETFNRALLDFLKT  257 (257)
T ss_pred             CcccCHHHHHHHHHhcCC----ceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence            999999999988887654    378889999999887 888999999999863

This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.

>KOG4391|consensus

Probab=99.64  E-value=1.6e-15  Score=135.14  Aligned_cols=229  Identities=15%  Similarity=0.139  Sum_probs=157.1

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      -+.+++.++|..+++++++.-+       ...|+++++|+..|...    .......-+....+..|+.++|||-|.+..
T Consensus        54 ye~i~l~T~D~vtL~a~~~~~E-------~S~pTlLyfh~NAGNmG----hr~~i~~~fy~~l~mnv~ivsYRGYG~S~G  122 (300)
T KOG4391|consen   54 YERIELRTRDKVTLDAYLMLSE-------SSRPTLLYFHANAGNMG----HRLPIARVFYVNLKMNVLIVSYRGYGKSEG  122 (300)
T ss_pred             ceEEEEEcCcceeEeeeeeccc-------CCCceEEEEccCCCccc----chhhHHHHHHHHcCceEEEEEeeccccCCC
Confidence            4678888999999999998732       25699999999887632    111222334445789999999999665433


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY  629 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~  629 (790)
                      .-.+.       ....|..++++++.. .+..|..|++++|.|.||.+|..+|.... +++.|++.-............+
T Consensus       123 spsE~-------GL~lDs~avldyl~t-~~~~dktkivlfGrSlGGAvai~lask~~-~ri~~~ivENTF~SIp~~~i~~  193 (300)
T KOG4391|consen  123 SPSEE-------GLKLDSEAVLDYLMT-RPDLDKTKIVLFGRSLGGAVAIHLASKNS-DRISAIIVENTFLSIPHMAIPL  193 (300)
T ss_pred             Ccccc-------ceeccHHHHHHHHhc-CccCCcceEEEEecccCCeeEEEeeccch-hheeeeeeechhccchhhhhhe
Confidence            21111       235788889999998 78899999999999999999999988654 4788888776654432100000


Q ss_pred             hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                      ...+         +..|.        ..                       .+.+     +                   
T Consensus       194 v~p~---------~~k~i--------~~-----------------------lc~k-----n-------------------  209 (300)
T KOG4391|consen  194 VFPF---------PMKYI--------PL-----------------------LCYK-----N-------------------  209 (300)
T ss_pred             eccc---------hhhHH--------HH-----------------------HHHH-----h-------------------
Confidence            0000         00000        00                       0000     0                   


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC  788 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~  788 (790)
                         .+.-...+..- +.|.|++.|.+|..||+.+.+++++.+....  .++..||++.|.-..-.+.+++.+.+||...
T Consensus       210 ---~~~S~~ki~~~-~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~--Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~  282 (300)
T KOG4391|consen  210 ---KWLSYRKIGQC-RMPFLFISGLKDELVPPVMMRQLYELCPSRT--KRLAEFPDGTHNDTWICDGYFQAIEDFLAEV  282 (300)
T ss_pred             ---hhcchhhhccc-cCceEEeecCccccCCcHHHHHHHHhCchhh--hhheeCCCCccCceEEeccHHHHHHHHHHHh
Confidence               00000223333 8999999999999999999999999988764  4889999999977655678999999999753

>PRK00870 haloalkane dehalogenase; Provisional

Probab=99.63  E-value=2.9e-14  Score=147.60  Aligned_cols=253  Identities=14%  Similarity=0.023  Sum_probs=131.3

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|.||++||.+...   ..|.  .....+++.||.|+++|+||+|.+.....      .....+++..+.+..++++   
T Consensus        46 ~~~lvliHG~~~~~---~~w~--~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~------~~~~~~~~~a~~l~~~l~~---  111 (302)
T PRK00870         46 GPPVLLLHGEPSWS---YLYR--KMIPILAAAGHRVIAPDLIGFGRSDKPTR------REDYTYARHVEWMRSWFEQ---  111 (302)
T ss_pred             CCEEEEECCCCCch---hhHH--HHHHHHHhCCCEEEEECCCCCCCCCCCCC------cccCCHHHHHHHHHHHHHH---
Confidence            46899999987652   2333  22234555799999999999886532200      0112345555555555553   


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR  659 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  659 (790)
                      ++.+++.++||||||.++..++.++|. .++++++.++........ ......+....  ...+..        .+....
T Consensus       112 l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~  180 (302)
T PRK00870        112 LDLTDVTLVCQDWGGLIGLRLAAEHPD-RFARLVVANTGLPTGDGPMPDAFWAWRAFS--QYSPVL--------PVGRLV  180 (302)
T ss_pred             cCCCCEEEEEEChHHHHHHHHHHhChh-heeEEEEeCCCCCCccccchHHHhhhhccc--ccCchh--------hHHHHh
Confidence            345789999999999999999998886 788887777532110000 00000000000  000000        000000


Q ss_pred             CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC-CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL-PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                             ...............+...............+... ..................+.++ ++|+|+|+|++|..
T Consensus       181 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~  252 (302)
T PRK00870        181 -------NGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERW-DKPFLTAFSDSDPI  252 (302)
T ss_pred             -------hccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcC-CCceEEEecCCCCc
Confidence                   00000000000000000000000000000000000 0000000000011122456788 99999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      +|... ..+.+.+.... .+.+.++++++|.+.. .++.+.+.+.+||+++
T Consensus       253 ~~~~~-~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~  301 (302)
T PRK00870        253 TGGGD-AILQKRIPGAA-GQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT  301 (302)
T ss_pred             ccCch-HHHHhhccccc-ccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence            99765 77777766431 1247799999999987 8899999999999865

>TIGR01840 esterase_phb esterase, PHB depolymerase family

Probab=99.62  E-value=1.4e-14  Score=140.77  Aligned_cols=125  Identities=22%  Similarity=0.286  Sum_probs=88.8

Q ss_pred             EEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc--cchHHHHHhcCCeEEEEEcCCCCCCChhh--hHhhhhccCC
Q psy463          485 VKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS--VDWNLYLADNKDIVVAYIDGRNSALKGNT--LKYAGYRRLG  560 (790)
Q Consensus       485 ~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~--~~~~~~~~~~~G~~v~~~d~rG~~~~g~~--~~~~~~~~~~  560 (790)
                      +++|.|++.    .+++|+||++||+++...   .+.  ..+ ..++.+.||+|++||++|++..+..  |........+
T Consensus         1 ~~ly~P~~~----~~~~P~vv~lHG~~~~~~---~~~~~~~~-~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~   72 (212)
T TIGR01840         1 MYVYVPAGL----TGPRALVLALHGCGQTAS---AYVIDWGW-KAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARG   72 (212)
T ss_pred             CEEEcCCCC----CCCCCEEEEeCCCCCCHH---HHhhhcCh-HHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCC
Confidence            367889873    357899999999887522   221  112 3455568999999999987643221  1111111223


Q ss_pred             ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      .....|+...++++.+++ .+|.+||+|+|+|+||.+++.++.++|+ .++++++.++.
T Consensus        73 ~~~~~~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~~~~~g~  129 (212)
T TIGR01840        73 TGEVESLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCTYPD-VFAGGASNAGL  129 (212)
T ss_pred             CccHHHHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHhCch-hheEEEeecCC
Confidence            346778888999988744 4899999999999999999999998885 88888887775

This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=99.62  E-value=3.9e-13  Score=134.79  Aligned_cols=262  Identities=16%  Similarity=0.192  Sum_probs=140.2

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      .++.|.+||++|+|.+..++          -++||++||++++      ..|||.++.....-.-+.++++ .+||+...
T Consensus        39 ~~~~ft~dG~kllF~s~~dg----------~~nly~lDL~t~~------i~QLTdg~g~~~~g~~~s~~~~-~~~Yv~~~  101 (386)
T PF14583_consen   39 YQNCFTDDGRKLLFASDFDG----------NRNLYLLDLATGE------ITQLTDGPGDNTFGGFLSPDDR-ALYYVKNG  101 (386)
T ss_dssp             TS--B-TTS-EEEEEE-TTS----------S-EEEEEETTT-E------EEE---SS-B-TTT-EE-TTSS-EEEEEETT
T ss_pred             cCCCcCCCCCEEEEEeccCC----------CcceEEEEcccCE------EEECccCCCCCccceEEecCCC-eEEEEECC
Confidence            56899999999999887554          2399999999986      8899998643111112234443 36676542


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEcc--CCcEE-EEE-ecc
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWAN--ESVVA-AWV-NRV  267 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp--Dg~~~-~~~-~r~  267 (790)
                                  ..|+.+|+++.+.+.+      ..                ..+.+...-.|+.  |++.+ ... .+.
T Consensus       102 ------------~~l~~vdL~T~e~~~v------y~----------------~p~~~~g~gt~v~n~d~t~~~g~e~~~~  147 (386)
T PF14583_consen  102 ------------RSLRRVDLDTLEERVV------YE----------------VPDDWKGYGTWVANSDCTKLVGIEISRE  147 (386)
T ss_dssp             ------------TEEEEEETTT--EEEE------EE------------------TTEEEEEEEEE-TTSSEEEEEEEEGG
T ss_pred             ------------CeEEEEECCcCcEEEE------EE----------------CCcccccccceeeCCCccEEEEEEEeeh
Confidence                        5899999999874322      20                2344555567754  45533 322 221


Q ss_pred             C-----------------cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463          268 Q-----------------NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  330 (790)
Q Consensus       268 ~-----------------~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~  330 (790)
                      .                 ...+|+.+|+.+|+.+.+..+   +.|++   .+.+||....++.++-   |-..    +.-
T Consensus       148 d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~---~~wlg---H~~fsP~dp~li~fCH---EGpw----~~V  214 (386)
T PF14583_consen  148 DWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFED---TDWLG---HVQFSPTDPTLIMFCH---EGPW----DLV  214 (386)
T ss_dssp             G-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEE---SS-EE---EEEEETTEEEEEEEEE----S-T----TTS
T ss_pred             hccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEec---Ccccc---CcccCCCCCCEEEEec---cCCc----cee
Confidence            1                 116899999999999999886   56764   7999998777776665   2222    222


Q ss_pred             -cEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeec----
Q psy463          331 -DHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCD----  404 (790)
Q Consensus       331 -~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~----  404 (790)
                       ..||+++.+++.      .+.+... ..+..+.--|+|||+.|+|.+.......+-|+.+++++  ++.+.+...    
T Consensus       215 d~RiW~i~~dg~~------~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t--~~~~~~~~~p~~~  286 (386)
T PF14583_consen  215 DQRIWTINTDGSN------VKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDT--GERRRLMEMPWCS  286 (386)
T ss_dssp             S-SEEEEETTS---------EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT----EEEEEEE-SEE
T ss_pred             ceEEEEEEcCCCc------ceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCC--CCceEEEeCCcee
Confidence             379999998876      4444332 23344446799999999997764222345677777765  333332211    


Q ss_pred             ---------c-ccc---------------------------C-------------------CCcccEEEEEEecCCcEEE
Q psy463          405 ---------L-LTS---------------------------A-------------------NQKCSYSGATFSTNVSYYV  428 (790)
Q Consensus       405 ---------~-~~~---------------------------~-------------------~~~~~~~~~~~s~dg~~~~  428 (790)
                               + +.+                           .                   .....-..++|||||++++
T Consensus       287 H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~Vl  366 (386)
T PF14583_consen  287 HFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVL  366 (386)
T ss_dssp             EEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEE
T ss_pred             eeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEE
Confidence                     0 000                           0                   0011223579999999999


Q ss_pred             EEeecCCCCeEEEEecC
Q psy463          429 LSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       429 ~~~~~~~~~~i~~~~~~  445 (790)
                      |.++..+.+.||++++.
T Consensus       367 F~Sd~~G~~~vY~v~i~  383 (386)
T PF14583_consen  367 FRSDMEGPPAVYLVEIP  383 (386)
T ss_dssp             EEE-TTSS-EEEEEE--
T ss_pred             EECCCCCCccEEEEeCc
Confidence            99999889999998763

>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A)

Probab=99.62  E-value=1.4e-14  Score=150.59  Aligned_cols=279  Identities=15%  Similarity=0.151  Sum_probs=143.5

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccc-------------------cc---ccchHHHHHhcC
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE-------------------RF---SVDWNLYLADNK  532 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~-------------------~~---~~~~~~~~~~~~  532 (790)
                      |...||..|..+.+.|.+       +..+|+++||..+.....-                   .|   ...+.. .+.++
T Consensus         2 ~~~~~g~~l~~~~~~~~~-------~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~-~l~~~   73 (332)
T TIGR01607         2 FRNKDGLLLKTYSWIVKN-------AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIE-NFNKN   73 (332)
T ss_pred             ccCCCCCeEEEeeeeccC-------CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHH-HHHHC
Confidence            345689999999888752       3469999999877642000                   00   012333 44458


Q ss_pred             CeEEEEEcCCCCCCChhhhHhhhh-ccCCccchhHHHHHHHHHHHhC-----------------CCcCCCceEEEEechH
Q psy463          533 DIVVAYIDGRNSALKGNTLKYAGY-RRLGTVEIYDQINVTRYLQENL-----------------PYIDKTRTAIWGWSYG  594 (790)
Q Consensus       533 G~~v~~~d~rG~~~~g~~~~~~~~-~~~~~~~~~D~~~~~~~l~~~~-----------------~~~d~~ri~i~G~S~G  594 (790)
                      ||.|+++|.||+|.+...-..... ..+ ...++|+...++.+.+..                 .+-+..+++|+|||||
T Consensus        74 G~~V~~~D~rGHG~S~~~~~~~g~~~~~-~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmG  152 (332)
T TIGR01607        74 GYSVYGLDLQGHGESDGLQNLRGHINCF-DDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMG  152 (332)
T ss_pred             CCcEEEecccccCCCccccccccchhhH-HHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCc
Confidence            999999999998865422000000 011 122456666666554310                 0001357999999999


Q ss_pred             HHHHHHHHhcCCC-------CceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEe
Q psy463          595 GYATGLALALDPS-------NVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH  667 (790)
Q Consensus       595 G~~a~~~a~~~p~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~  667 (790)
                      |.++..++..++.       ..++++|+.+|+.............+          ... ...+...+..+.  |-+...
T Consensus       153 g~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~----------~~~-~~~l~~~~~~~~--p~~~~~  219 (332)
T TIGR01607       153 GNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKF----------KYF-YLPVMNFMSRVF--PTFRIS  219 (332)
T ss_pred             cHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchh----------hhh-HHHHHHHHHHHC--Cccccc
Confidence            9999988865432       15778888888754321100000000          000 000000000000  000000


Q ss_pred             ecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhh-hhhhhhhccC-CccEEEEecCCCcccchhhhH
Q psy463          668 GTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIA-ALNNKVDRIR-DKQYLLVHGTMDDNVHFQQSM  745 (790)
Q Consensus       668 g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~-~~P~Lii~G~~D~~v~~~~~~  745 (790)
                      ...+.    .......+.. ..++.    .+................ .....+.+++ ++|+|++||++|.+++++.+.
T Consensus       220 ~~~~~----~~~~~~~~~~-~~Dp~----~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~  290 (332)
T TIGR01607       220 KKIRY----EKSPYVNDII-KFDKF----RYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTV  290 (332)
T ss_pred             Ccccc----ccChhhhhHH-hcCcc----ccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHH
Confidence            00000    0000000000 00110    000000000000000000 0012334442 589999999999999999999


Q ss_pred             HHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHH
Q psy463          746 MLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLD  786 (790)
Q Consensus       746 ~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~  786 (790)
                      .+++.+...  .+++.+||+++|.+..  .++++++.+.+||+
T Consensus       291 ~~~~~~~~~--~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~  331 (332)
T TIGR01607       291 SFYNKLSIS--NKELHTLEDMDHVITIEPGNEEVLKKIIEWIS  331 (332)
T ss_pred             HHHHhccCC--CcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence            888876543  3588899999999987  57889999999986

These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.

>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase

Probab=99.62  E-value=1.3e-14  Score=148.19  Aligned_cols=255  Identities=14%  Similarity=0.059  Sum_probs=141.0

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++.....       +...|.||++||.+++.   ..|.  .....++ .+|.|+++|+||+|.+...  .     
T Consensus        10 ~~~~~~~~~~~~-------~~~~~plvllHG~~~~~---~~w~--~~~~~L~-~~~~vi~~Dl~G~G~S~~~--~-----   69 (276)
T TIGR02240        10 DGQSIRTAVRPG-------KEGLTPLLIFNGIGANL---ELVF--PFIEALD-PDLEVIAFDVPGVGGSSTP--R-----   69 (276)
T ss_pred             CCcEEEEEEecC-------CCCCCcEEEEeCCCcch---HHHH--HHHHHhc-cCceEEEECCCCCCCCCCC--C-----
Confidence            677777765421       12235789999987763   2333  1223344 4799999999998875432  1     


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                       ....++++.+.+..+++.   ++..++.++||||||.+++.++.++|+ .++.+++.++......... ......... 
T Consensus        70 -~~~~~~~~~~~~~~~i~~---l~~~~~~LvG~S~GG~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~~-~~~~~~~~~-  142 (276)
T TIGR02240        70 -HPYRFPGLAKLAARMLDY---LDYGQVNAIGVSWGGALAQQFAHDYPE-RCKKLILAATAAGAVMVPG-KPKVLMMMA-  142 (276)
T ss_pred             -CcCcHHHHHHHHHHHHHH---hCcCceEEEEECHHHHHHHHHHHHCHH-HhhheEEeccCCccccCCC-chhHHHHhc-
Confidence             113455666556555553   345789999999999999999999885 8888888887653210000 000000000 


Q ss_pred             ccCchhhhhhc-cccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          639 FEDNLEGYKIA-ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       639 ~~~~~~~~~~~-~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                         ....+... .....+..+...     ....+.    .........+......    .+     +...... ......
T Consensus       143 ---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~----~~-----~~~~~~~-~~~~~~  200 (276)
T TIGR02240       143 ---SPRRYIQPSHGIHIAPDIYGG-----AFRRDP----ELAMAHASKVRSGGKL----GY-----YWQLFAG-LGWTSI  200 (276)
T ss_pred             ---Cchhhhccccccchhhhhccc-----eeeccc----hhhhhhhhhcccCCCc----hH-----HHHHHHH-cCCchh
Confidence               00000000 000000000000     000000    0000000000000000    00     0000000 001112


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ..+.++ ++|+|+++|++|..+|+..++++.+.++..    ++.++++ ||.+.. .++++.+.+.+|++++
T Consensus       201 ~~l~~i-~~P~lii~G~~D~~v~~~~~~~l~~~~~~~----~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~  266 (276)
T TIGR02240       201 HWLHKI-QQPTLVLAGDDDPIIPLINMRLLAWRIPNA----ELHIIDD-GHLFLITRAEAVAPIIMKFLAEE  266 (276)
T ss_pred             hHhhcC-CCCEEEEEeCCCCcCCHHHHHHHHHhCCCC----EEEEEcC-CCchhhccHHHHHHHHHHHHHHh
Confidence            456788 999999999999999999999998877643    7778876 999887 8899999999999864

This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.

>PRK11460 putative hydrolase; Provisional

Probab=99.61  E-value=2.5e-14  Score=140.39  Aligned_cols=186  Identities=14%  Similarity=0.076  Sum_probs=118.3

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC----ChhhhHhhhhccCCcc-------chhH
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL----KGNTLKYAGYRRLGTV-------EIYD  566 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~----~g~~~~~~~~~~~~~~-------~~~D  566 (790)
                      ....|+||++||.+++.   ..|. ..... +...++.+..+.++|...    .+..|.... ......       ....
T Consensus        13 ~~~~~~vIlLHG~G~~~---~~~~-~l~~~-l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~~   86 (232)
T PRK11460         13 KPAQQLLLLFHGVGDNP---VAMG-EIGSW-FAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMPT   86 (232)
T ss_pred             CCCCcEEEEEeCCCCCh---HHHH-HHHHH-HHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHHH
Confidence            34568999999988763   2222 12223 333444334444444211    122221100 000001       1223


Q ss_pred             HHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhh
Q psy463          567 QINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGY  646 (790)
Q Consensus       567 ~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  646 (790)
                      +.+.++++.++. .++.+||+++|+|+||.+++.++.++|. .++++++.++...             ..+         
T Consensus        87 l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~~~~-~~~~vv~~sg~~~-------------~~~---------  142 (232)
T PRK11460         87 FIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKAEPG-LAGRVIAFSGRYA-------------SLP---------  142 (232)
T ss_pred             HHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHhCCC-cceEEEEeccccc-------------ccc---------
Confidence            344556665533 4788899999999999999999987764 6666666554210             000         


Q ss_pred             hhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCc
Q psy463          647 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDK  726 (790)
Q Consensus       647 ~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  726 (790)
                                                                                              ..... ++
T Consensus       143 ------------------------------------------------------------------------~~~~~-~~  149 (232)
T PRK11460        143 ------------------------------------------------------------------------ETAPT-AT  149 (232)
T ss_pred             ------------------------------------------------------------------------ccccC-CC
Confidence                                                                                    00012 68


Q ss_pred             cEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          727 QYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       727 P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      |+|++||++|.+||++.+.++.+.|++.+.++++++||+++|.+..   +..+.+.+||.+.|
T Consensus       150 pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~---~~~~~~~~~l~~~l  209 (232)
T PRK11460        150 TIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDP---RLMQFALDRLRYTV  209 (232)
T ss_pred             cEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH---HHHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999999999964   55666777776654

>PLN02824 hydrolase, alpha/beta fold family protein

Probab=99.61  E-value=2.6e-14  Score=147.46  Aligned_cols=266  Identities=11%  Similarity=0.005  Sum_probs=141.4

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|..+++....        .. .|.||++||.+++   ...|..  ....++ ..|.|+++|.+|+|.+...-..... .
T Consensus        16 ~~~~i~y~~~G--------~~-~~~vlllHG~~~~---~~~w~~--~~~~L~-~~~~vi~~DlpG~G~S~~~~~~~~~-~   79 (294)
T PLN02824         16 KGYNIRYQRAG--------TS-GPALVLVHGFGGN---ADHWRK--NTPVLA-KSHRVYAIDLLGYGYSDKPNPRSAP-P   79 (294)
T ss_pred             cCeEEEEEEcC--------CC-CCeEEEECCCCCC---hhHHHH--HHHHHH-hCCeEEEEcCCCCCCCCCCcccccc-c
Confidence            66677654431        11 2689999999887   334442  223344 3479999999998876432100000 0


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc--ccchh-----
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD--TIYSE-----  631 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~--~~~~~-----  631 (790)
                      -....+++..+.+..++++.+   .+++.++||||||.+++.++.++|+ ++++++++++........  .....     
T Consensus        80 ~~~~~~~~~a~~l~~~l~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lili~~~~~~~~~~~~~~~~~~~~~~  155 (294)
T PLN02824         80 NSFYTFETWGEQLNDFCSDVV---GDPAFVICNSVGGVVGLQAAVDAPE-LVRGVMLINISLRGLHIKKQPWLGRPFIKA  155 (294)
T ss_pred             cccCCHHHHHHHHHHHHHHhc---CCCeEEEEeCHHHHHHHHHHHhChh-heeEEEEECCCcccccccccchhhhHHHHH
Confidence            012446666666666665343   4789999999999999999999986 899999888753211000  00000     


Q ss_pred             --hhcCCCCccCchhhh-hhccccchhhhccCCcEEEEeecCC-CccChhhHHHHHHHHHhcCcch-hcccccCCCCcCC
Q psy463          632 --RYMGLPTFEDNLEGY-KIAALNNKVDRIRDKQYLLVHGTMD-DNVHFQQSMMLAKSLQHADIMF-QSQRYMGLPTFED  706 (790)
Q Consensus       632 --~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~p~l~~~g~~d-~~v~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~  706 (790)
                        ..+...  . ....+ ........+..+     + .....+ ..+.    ..+.+.+....... ....+...     
T Consensus       156 ~~~~~~~~--~-~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----  217 (294)
T PLN02824        156 FQNLLRET--A-VGKAFFKSVATPETVKNI-----L-CQCYHDDSAVT----DELVEAILRPGLEPGAVDVFLDF-----  217 (294)
T ss_pred             HHHHHhch--h-HHHHHHHhhcCHHHHHHH-----H-HHhccChhhcc----HHHHHHHHhccCCchHHHHHHHH-----
Confidence              000000  0 00000 000000000000     0 000000 0000    11111111111000 00000000     


Q ss_pred             cchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463          707 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL  785 (790)
Q Consensus       707 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl  785 (790)
                       ............++++ ++|+|+|+|++|..+|.+.++.+.+...    ..++++++++||..+. +++++.+.+.+||
T Consensus       218 -~~~~~~~~~~~~l~~i-~~P~lvi~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl  291 (294)
T PLN02824        218 -ISYSGGPLPEELLPAV-KCPVLIAWGEKDPWEPVELGRAYANFDA----VEDFIVLPGVGHCPQDEAPELVNPLIESFV  291 (294)
T ss_pred             -hccccccchHHHHhhc-CCCeEEEEecCCCCCChHHHHHHHhcCC----ccceEEeCCCCCChhhhCHHHHHHHHHHHH
Confidence             0000000112446788 9999999999999999888777655332    2488999999999888 9999999999999


Q ss_pred             HHh
Q psy463          786 DSC  788 (790)
Q Consensus       786 ~~~  788 (790)
                      +++
T Consensus       292 ~~~  294 (294)
T PLN02824        292 ARH  294 (294)
T ss_pred             hcC
Confidence            864

>KOG4178|consensus

Probab=99.60  E-value=1.5e-13  Score=133.66  Aligned_cols=260  Identities=12%  Similarity=0.098  Sum_probs=141.9

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ...|+|+++||.|...   ..|.  .....++.+||+|+++|+||.|.+..+      .....+.+..+...+..+++++
T Consensus        42 ~~gP~illlHGfPe~w---yswr--~q~~~la~~~~rviA~DlrGyG~Sd~P------~~~~~Yt~~~l~~di~~lld~L  110 (322)
T KOG4178|consen   42 GDGPIVLLLHGFPESW---YSWR--HQIPGLASRGYRVIAPDLRGYGFSDAP------PHISEYTIDELVGDIVALLDHL  110 (322)
T ss_pred             CCCCEEEEEccCCccc---hhhh--hhhhhhhhcceEEEecCCCCCCCCCCC------CCcceeeHHHHHHHHHHHHHHh
Confidence            4569999999999872   2233  334456778999999999997654332      1112245666666666777655


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc---cc---cccchhhh----cCCCCccCchhhhhh
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI---YY---DTIYSERY----MGLPTFEDNLEGYKI  648 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~---~~---~~~~~~~~----~g~~~~~~~~~~~~~  648 (790)
                      +   .+|+.++||+||+.+|+.++..+|+ ++++.+..+......   ..   ...+...+    +..+  ......+..
T Consensus       111 g---~~k~~lvgHDwGaivaw~la~~~Pe-rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~--~~~E~~~s~  184 (322)
T KOG4178|consen  111 G---LKKAFLVGHDWGAIVAWRLALFYPE-RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEP--GKPETELSK  184 (322)
T ss_pred             c---cceeEEEeccchhHHHHHHHHhChh-hcceEEEecCCCCCcccchhhhhccccCccceeEecccc--Ccchhhhcc
Confidence            5   5899999999999999999999997 777777666543311   00   01111110    0111  000111111


Q ss_pred             ccccchhhhcc---CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhh-----hhhh
Q psy463          649 AALNNKVDRIR---DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAAL-----NNKV  720 (790)
Q Consensus       649 ~~~~~~~~~~~---~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  720 (790)
                      .........+.   .....+..+..+.. +.....+-.+......   +...+.      .-.++|++...     -...
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~w~t~edi~~~~~~f---~~~g~~------gplNyyrn~~r~w~a~~~~~  254 (322)
T KOG4178|consen  185 DDTEMLVKTFRTRKTPGPLIVPKQPNEN-PLWLTEEDIAFYVSKF---QIDGFT------GPLNYYRNFRRNWEAAPWAL  254 (322)
T ss_pred             chhHHhHHhhhccccCCccccCCCCCCc-cchhhHHHHHHHHhcc---cccccc------ccchhhHHHhhCchhccccc
Confidence            00000000000   01111111111111 0001111111111111   001111      11222222211     1335


Q ss_pred             hccCCccEEEEecCCCcccchhh-hHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          721 DRIRDKQYLLVHGTMDDNVHFQQ-SMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       721 ~~i~~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      .++ ++|+++++|++|.+.+... ...+.+.+...   .+.++++|.||+++. +++++.+.++.||++..
T Consensus       255 ~~i-~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l---~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~  321 (322)
T KOG4178|consen  255 AKI-TIPVLFIWGDLDPVLPYPIFGELYRKDVPRL---TERVVIEGIGHFVQQEKPQEVNQAILGFINSFS  321 (322)
T ss_pred             ccc-ccceEEEEecCcccccchhHHHHHHHhhccc---cceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence            567 9999999999999988763 33333333332   267899999999998 99999999999998753

>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein

Probab=99.60  E-value=1.7e-14  Score=148.01  Aligned_cols=257  Identities=14%  Similarity=0.058  Sum_probs=137.8

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|..+++....+        ...|+||++||.++..   ..|.  .....++ ++|.|+++|+||+|.+.....      
T Consensus        14 ~~~~~~~~~~g~--------~~~~~vv~~hG~~~~~---~~~~--~~~~~l~-~~~~vi~~D~~G~G~S~~~~~------   73 (278)
T TIGR03056        14 GPFHWHVQDMGP--------TAGPLLLLLHGTGAST---HSWR--DLMPPLA-RSFRVVAPDLPGHGFTRAPFR------   73 (278)
T ss_pred             CCEEEEEEecCC--------CCCCeEEEEcCCCCCH---HHHH--HHHHHHh-hCcEEEeecCCCCCCCCCccc------
Confidence            666666544321        2237899999987762   2333  2223344 579999999999876432211      


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc----cchhhhc
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT----IYSERYM  634 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~----~~~~~~~  634 (790)
                       ....+++..+.+..+++..   +.++++|+||||||.+++.++.++|. +++++++.++.........    .+....+
T Consensus        74 -~~~~~~~~~~~l~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~  148 (278)
T TIGR03056        74 -FRFTLPSMAEDLSALCAAE---GLSPDGVIGHSAGAAIALRLALDGPV-TPRMVVGINAALMPFEGMAGTLFPYMARVL  148 (278)
T ss_pred             -cCCCHHHHHHHHHHHHHHc---CCCCceEEEECccHHHHHHHHHhCCc-ccceEEEEcCcccccccccccccchhhHhh
Confidence             1134566666666666533   34688999999999999999998885 6777777776543211000    0000000


Q ss_pred             -CCCCccCchhhhhhccc-cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcch-hcccccCCCCcCCcchhh
Q psy463          635 -GLPTFEDNLEGYKIAAL-NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF-QSQRYMGLPTFEDNLEGY  711 (790)
Q Consensus       635 -g~~~~~~~~~~~~~~~~-~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~  711 (790)
                       ..+   ........... ........     ...+.   ..... .......+....... ....         ....+
T Consensus       149 ~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~  207 (278)
T TIGR03056       149 ACNP---FTPPMMSRGAADQQRVERLI-----RDTGS---LLDKA-GMTYYGRLIRSPAHVDGALS---------MMAQW  207 (278)
T ss_pred             hhcc---cchHHHHhhcccCcchhHHh-----hcccc---ccccc-hhhHHHHhhcCchhhhHHHH---------Hhhcc
Confidence             000   00000000000 00000000     00000   00000 000111000000000 0000         00000


Q ss_pred             hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          712 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       712 ~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      ........++++ ++|+|+++|++|..+|+..++.+.+.++.    +++.++|++||.+.. .++++.+.|.+||+
T Consensus       208 ~~~~~~~~~~~i-~~P~lii~g~~D~~vp~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~  278 (278)
T TIGR03056       208 DLAPLNRDLPRI-TIPLHLIAGEEDKAVPPDESKRAATRVPT----ATLHVVPGGGHLVHEEQADGVVGLILQAAE  278 (278)
T ss_pred             cccchhhhcccC-CCCEEEEEeCCCcccCHHHHHHHHHhccC----CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence            000112346678 89999999999999999988888776654    388999999999887 88999999999984

Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.

>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional

Probab=99.60  E-value=5.1e-14  Score=150.10  Aligned_cols=277  Identities=13%  Similarity=0.072  Sum_probs=142.5

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHH--hcCCeEEEEEcCCCCCCChhhhHhhhh
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLA--DNKDIVVAYIDGRNSALKGNTLKYAGY  556 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~--~~~G~~v~~~d~rG~~~~g~~~~~~~~  556 (790)
                      .|.++++....|.+     +...|.||++||++++.   ..|.......+.  .+.+|.|+++|++|+|.+.... .   
T Consensus       184 ~~~~l~~~~~gp~~-----~~~k~~VVLlHG~~~s~---~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~-~---  251 (481)
T PLN03087        184 SNESLFVHVQQPKD-----NKAKEDVLFIHGFISSS---AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA-D---  251 (481)
T ss_pred             CCeEEEEEEecCCC-----CCCCCeEEEECCCCccH---HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC-C---
Confidence            56788888887764     22347899999998763   233321111221  2369999999999987654321 0   


Q ss_pred             ccCCccchhHHHHHH-HHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc-
Q psy463          557 RRLGTVEIYDQINVT-RYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM-  634 (790)
Q Consensus       557 ~~~~~~~~~D~~~~~-~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~-  634 (790)
                         ....+++..+.+ +.+++..   +..++.++||||||.+++.++.++|+ +++.+++.++..........-....+ 
T Consensus       252 ---~~ytl~~~a~~l~~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe-~V~~LVLi~~~~~~~~~~~~~~~~~~~  324 (481)
T PLN03087        252 ---SLYTLREHLEMIERSVLERY---KVKSFHIVAHSLGCILALALAVKHPG-AVKSLTLLAPPYYPVPKGVQATQYVMR  324 (481)
T ss_pred             ---CcCCHHHHHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChH-hccEEEEECCCccccccchhHHHHHHH
Confidence               113355555555 3455433   35789999999999999999999986 78888888764321110000000000 


Q ss_pred             --CCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcch-hcccccC---CCCcCCc-
Q psy463          635 --GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF-QSQRYMG---LPTFEDN-  707 (790)
Q Consensus       635 --g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~-~~~~~~~---~~~~~~~-  707 (790)
                        .....+. ...+.. .+..+...+.....++.  ..+.    .....+...+....... ....+..   ...+... 
T Consensus       325 ~~~~~~~~~-~~~~~~-~~~~w~~~~~~~~~~~~--~~~~----~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~  396 (481)
T PLN03087        325 KVAPRRVWP-PIAFGA-SVACWYEHISRTICLVI--CKNH----RLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLH  396 (481)
T ss_pred             HhcccccCC-ccccch-hHHHHHHHHHhhhhccc--ccch----HHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHH
Confidence              0000000 000000 00000000000000000  0000    00000000000000000 0000000   0000000 


Q ss_pred             --chh---hhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHH
Q psy463          708 --LEG---YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHT  780 (790)
Q Consensus       708 --~~~---~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~  780 (790)
                        ...   .....+....+++ ++|+|++||++|..+|++.++.+.+.++.    ++++++|++||....  .++.+.+.
T Consensus       397 ~~i~~~~~~l~~~l~~l~~~I-~vPtLII~Ge~D~ivP~~~~~~la~~iP~----a~l~vI~~aGH~~~v~e~p~~fa~~  471 (481)
T PLN03087        397 NIICGSGSKLDGYLDHVRDQL-KCDVAIFHGGDDELIPVECSYAVKAKVPR----ARVKVIDDKDHITIVVGRQKEFARE  471 (481)
T ss_pred             HHHhchhhhhhhHHHHHHHhC-CCCEEEEEECCCCCCCHHHHHHHHHhCCC----CEEEEeCCCCCcchhhcCHHHHHHH
Confidence              000   0000011223468 99999999999999999999999888765    489999999999663  78899999


Q ss_pred             HHHHHHH
Q psy463          781 LERFLDS  787 (790)
Q Consensus       781 i~~fl~~  787 (790)
                      +++|...
T Consensus       472 L~~F~~~  478 (481)
T PLN03087        472 LEEIWRR  478 (481)
T ss_pred             HHHHhhc
Confidence            9999864

>PLN02965 Probable pheophorbidase

Probab=99.58  E-value=1.2e-13  Score=139.14  Aligned_cols=244  Identities=12%  Similarity=0.043  Sum_probs=130.9

Q ss_pred             EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC
Q psy463          503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID  582 (790)
Q Consensus       503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d  582 (790)
                      .||++||.+.+.   ..|.  .....+++.||.|+++|+||+|.+.....       ....++++.+.+..+++.++ . 
T Consensus         5 ~vvllHG~~~~~---~~w~--~~~~~L~~~~~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l~-~-   70 (255)
T PLN02965          5 HFVFVHGASHGA---WCWY--KLATLLDAAGFKSTCVDLTGAGISLTDSN-------TVSSSDQYNRPLFALLSDLP-P-   70 (255)
T ss_pred             EEEEECCCCCCc---CcHH--HHHHHHhhCCceEEEecCCcCCCCCCCcc-------ccCCHHHHHHHHHHHHHhcC-C-
Confidence            489999988663   2333  23334544799999999999886542200       11335666665555555333 1 


Q ss_pred             CCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC--cccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          583 KTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD--WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       583 ~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                      ..++.++||||||.++..++.++|+ +++.++..++...  .......+.....+..      ..+.             
T Consensus        71 ~~~~~lvGhSmGG~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-------------  130 (255)
T PLN02965         71 DHKVILVGHSIGGGSVTEALCKFTD-KISMAIYVAAAMVKPGSIISPRLKNVMEGTE------KIWD-------------  130 (255)
T ss_pred             CCCEEEEecCcchHHHHHHHHhCch-heeEEEEEccccCCCCCCccHHHHhhhhccc------ccee-------------
Confidence            1589999999999999999998885 7887777765421  0000000000000000      0000             


Q ss_pred             CcEEEEeecCCCccChhhHHHHHHHHHhcCcchh--cccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQ--SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                        .....+..........................  ............. ...........+..+ ++|+|+++|++|..
T Consensus       131 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i-~vP~lvi~g~~D~~  206 (255)
T PLN02965        131 --YTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVR-AFQDLDKLPPNPEAE-KVPRVYIKTAKDNL  206 (255)
T ss_pred             --eeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCc-chhhhhhccchhhcC-CCCEEEEEcCCCCC
Confidence              00000000000000000000000000000000  0000000000000 000000111234567 99999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      +|+..++.+.+.+...    ++++++++||+++. .++++.+.+.+|+++.
T Consensus       207 ~~~~~~~~~~~~~~~a----~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~  253 (255)
T PLN02965        207 FDPVRQDVMVENWPPA----QTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL  253 (255)
T ss_pred             CCHHHHHHHHHhCCcc----eEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence            9999998888877654    88899999999998 8999999999998764

>TIGR00976 /NonD putative hydrolase, CocE/NonD family

Probab=99.58  E-value=1.3e-13  Score=153.68  Aligned_cols=134  Identities=16%  Similarity=0.216  Sum_probs=100.5

Q ss_pred             EcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhh
Q psy463          476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG  555 (790)
Q Consensus       476 ~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~  555 (790)
                      +..||.+|.+.+++|.+     .++.|+||++||..........+..... ..++++||+|+++|+||++.++..+.   
T Consensus         2 ~~~DG~~L~~~~~~P~~-----~~~~P~Il~~~gyg~~~~~~~~~~~~~~-~~l~~~Gy~vv~~D~RG~g~S~g~~~---   72 (550)
T TIGR00976         2 PMRDGTRLAIDVYRPAG-----GGPVPVILSRTPYGKDAGLRWGLDKTEP-AWFVAQGYAVVIQDTRGRGASEGEFD---   72 (550)
T ss_pred             cCCCCCEEEEEEEecCC-----CCCCCEEEEecCCCCchhhccccccccH-HHHHhCCcEEEEEeccccccCCCceE---
Confidence            45699999999999974     3468999999987654210011222223 34445899999999999887654422   


Q ss_pred             hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463          556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       556 ~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                        ..+...++|+.++++|+.+ .++.+ .+|+++|+||||.+++.++..+|+ .+++++..++..++.
T Consensus        73 --~~~~~~~~D~~~~i~~l~~-q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~-~l~aiv~~~~~~d~~  135 (550)
T TIGR00976        73 --LLGSDEAADGYDLVDWIAK-QPWCD-GNVGMLGVSYLAVTQLLAAVLQPP-ALRAIAPQEGVWDLY  135 (550)
T ss_pred             --ecCcccchHHHHHHHHHHh-CCCCC-CcEEEEEeChHHHHHHHHhccCCC-ceeEEeecCcccchh
Confidence              1124678999999999988 66665 699999999999999999998775 899999998887653

This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.

>PRK06489 hypothetical protein; Provisional

Probab=99.57  E-value=9.5e-14  Score=146.98  Aligned_cols=68  Identities=18%  Similarity=0.266  Sum_probs=57.3

Q ss_pred             hhhhhccCCccEEEEecCCCcccchhhh--HHHHHHHHhcCCceEEEEcCCC----CCcCCCcchHHHHHHHHHHHHhh
Q psy463          717 NNKVDRIRDKQYLLVHGTMDDNVHFQQS--MMLAKSLQHADIMFQSQTYPDE----EHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       717 ~~~~~~i~~~P~Lii~G~~D~~v~~~~~--~~l~~~l~~~g~~~~~~~~p~~----~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      ...+++| ++|+|+|+|++|..+|++.+  +.+.+.+++.    +++++|++    ||..+..++.+.+.|.+||+.+-
T Consensus       285 ~~~L~~I-~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a----~l~~i~~a~~~~GH~~~e~P~~~~~~i~~FL~~~~  358 (360)
T PRK06489        285 SPDLEKI-KAPVLAINSADDERNPPETGVMEAALKRVKHG----RLVLIPASPETRGHGTTGSAKFWKAYLAEFLAQVP  358 (360)
T ss_pred             HHHHHhC-CCCEEEEecCCCcccChhhHHHHHHHHhCcCC----eEEEECCCCCCCCcccccCHHHHHHHHHHHHHhcc
Confidence            3567889 99999999999999998876  6777776654    89999996    99886588899999999998764

>COG0657 Aes Esterase/lipase [Lipid metabolism]

Probab=99.57  E-value=1.2e-13  Score=143.16  Aligned_cols=241  Identities=17%  Similarity=0.148  Sum_probs=155.0

Q ss_pred             CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463          478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR  557 (790)
Q Consensus       478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~  557 (790)
                      ..+..+...+|.|. ..  .....|+||++|||++....... .......++...|+.|+.+|||-.+.+..+       
T Consensus        59 ~~~~~~~~~~y~p~-~~--~~~~~p~vly~HGGg~~~g~~~~-~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p-------  127 (312)
T COG0657          59 PSGDGVPVRVYRPD-RK--AAATAPVVLYLHGGGWVLGSLRT-HDALVARLAAAAGAVVVSVDYRLAPEHPFP-------  127 (312)
T ss_pred             CCCCceeEEEECCC-CC--CCCCCcEEEEEeCCeeeecChhh-hHHHHHHHHHHcCCEEEecCCCCCCCCCCC-------
Confidence            34556778899982 11  45578999999999986442222 224556667778999999999998876433       


Q ss_pred             cCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCCCC---ceEEEEEeCCCCCcccccccchhh
Q psy463          558 RLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDPSN---VFKCGISVAPVTDWIYYDTIYSER  632 (790)
Q Consensus       558 ~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p~~---~~~~~v~~~~~~~~~~~~~~~~~~  632 (790)
                          ..++|+.++++|+.++..  .+|+++|+|+|+|.||.+++.++..-.+.   ..++.+.++|+.+...-...+.. 
T Consensus       128 ----~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~-  202 (312)
T COG0657         128 ----AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPG-  202 (312)
T ss_pred             ----chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhh-
Confidence                558999999999987521  37899999999999999999887754432   56788899998776530000000 


Q ss_pred             hcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHH-HHHHHHHhcCcchhcccccCCCCcCCcchhh
Q psy463          633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSM-MLAKSLQHADIMFQSQRYMGLPTFEDNLEGY  711 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  711 (790)
                                   +..                     .+.. ...... .+...+......              ...  
T Consensus       203 -------------~~~---------------------~~~~-~~~~~~~~~~~~~~~~~~~--------------~~~--  231 (312)
T COG0657         203 -------------YGE---------------------ADLL-DAAAILAWFADLYLGAAPD--------------RED--  231 (312)
T ss_pred             -------------cCC---------------------cccc-CHHHHHHHHHHHhCcCccc--------------cCC--
Confidence                         000                     0000 000000 000000000000              000  


Q ss_pred             hhhhhhhh--hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHH
Q psy463          712 KIAALNNK--VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFL  785 (790)
Q Consensus       712 ~~~~~~~~--~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl  785 (790)
                      ...+++..  +..+  .|+|+++|+.|...+  ++..+.+.|+++|+++++..+++..|.+..    .....+..+..|+
T Consensus       232 p~~spl~~~~~~~l--PP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l  307 (312)
T COG0657         232 PEASPLASDDLSGL--PPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFL  307 (312)
T ss_pred             CccCccccccccCC--CCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHH
Confidence            00111111  2223  789999999999887  999999999999999999999999998854    2344466777777


Q ss_pred             HHhh
Q psy463          786 DSCF  789 (790)
Q Consensus       786 ~~~l  789 (790)
                      ...+
T Consensus       308 ~~~~  311 (312)
T COG0657         308 RAAL  311 (312)
T ss_pred             HHhc
Confidence            6543

>KOG1515|consensus

Probab=99.57  E-value=2.9e-13  Score=136.36  Aligned_cols=254  Identities=18%  Similarity=0.155  Sum_probs=161.5

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccc-cccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVT-ERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~-~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      +.......+...+|+|....  ...+.|+||++|||++..... ......+...++++.+..|+.+|||-++.+..+   
T Consensus        66 v~~~~~~~l~vRly~P~~~~--~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P---  140 (336)
T KOG1515|consen   66 VTIDPFTNLPVRLYRPTSSS--SETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP---  140 (336)
T ss_pred             eEecCCCCeEEEEEcCCCCC--cccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC---
Confidence            33445567899999998765  337889999999999864311 111224566677778999999999998876544   


Q ss_pred             hhhccCCccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-----CCceEEEEEeCCCCCcccc
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-----SNVFKCGISVAPVTDWIYY  625 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-----~~~~~~~v~~~~~~~~~~~  625 (790)
                              ..++|..++++|+.++   ...+|.+||+|+|-|.||.+|..++.+--     ...+++.+++.|+......
T Consensus       141 --------a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~  212 (336)
T KOG1515|consen  141 --------AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR  212 (336)
T ss_pred             --------ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence                    5689999999999874   23489999999999999999988776543     2367899999998654322


Q ss_pred             ccc-chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463          626 DTI-YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTF  704 (790)
Q Consensus       626 ~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  704 (790)
                      ... +.+...+.+                                   .........+...+.-.+..     ....|..
T Consensus       213 ~~~e~~~~~~~~~-----------------------------------~~~~~~~~~~w~~~lP~~~~-----~~~~p~~  252 (336)
T KOG1515|consen  213 TESEKQQNLNGSP-----------------------------------ELARPKIDKWWRLLLPNGKT-----DLDHPFI  252 (336)
T ss_pred             CCHHHHHhhcCCc-----------------------------------chhHHHHHHHHHHhCCCCCC-----CcCCccc
Confidence            110 100000000                                   00000011111111000110     1111111


Q ss_pred             CCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cchHHH
Q psy463          705 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRPHFY  778 (790)
Q Consensus       705 ~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~~~~  778 (790)
                      .....     +.........-.|+|++.++.|...  +++..+++.|++.|+++++++++++.|.++.      .....+
T Consensus       253 np~~~-----~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~  325 (336)
T KOG1515|consen  253 NPVGN-----SLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALM  325 (336)
T ss_pred             ccccc-----ccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHH
Confidence            11100     0001111220366999999999764  7899999999999999999999999999875      345677


Q ss_pred             HHHHHHHHHh
Q psy463          779 HTLERFLDSC  788 (790)
Q Consensus       779 ~~i~~fl~~~  788 (790)
                      ..+.+|+++.
T Consensus       326 ~~i~~fi~~~  335 (336)
T KOG1515|consen  326 DAIVEFIKSN  335 (336)
T ss_pred             HHHHHHHhhc
Confidence            8888888764

>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]

Probab=99.57  E-value=4.2e-14  Score=124.74  Aligned_cols=183  Identities=18%  Similarity=0.191  Sum_probs=129.3

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ...|+.+.+|--|-.....+.-...-....+.++||+++.+|+||.|.+..+|.+      |..+.+|..++++|+.++.
T Consensus        26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~------GiGE~~Da~aaldW~~~~h   99 (210)
T COG2945          26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN------GIGELEDAAAALDWLQARH   99 (210)
T ss_pred             CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC------CcchHHHHHHHHHHHHhhC
Confidence            4567888887654321111111112334566789999999999999887766543      4567999999999999865


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhc
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRI  658 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  658 (790)
                      +.  ..-..+.|+|+|+++++.++.+.|+  ....++.+|..+.                       |..          
T Consensus       100 p~--s~~~~l~GfSFGa~Ia~~la~r~~e--~~~~is~~p~~~~-----------------------~df----------  142 (210)
T COG2945         100 PD--SASCWLAGFSFGAYIAMQLAMRRPE--ILVFISILPPINA-----------------------YDF----------  142 (210)
T ss_pred             CC--chhhhhcccchHHHHHHHHHHhccc--ccceeeccCCCCc-----------------------hhh----------
Confidence            53  2335889999999999999998764  3344444443320                       000          


Q ss_pred             cCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       659 ~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                                                                                 ..+... .+|.|+|+|+.|.+
T Consensus       143 -----------------------------------------------------------s~l~P~-P~~~lvi~g~~Ddv  162 (210)
T COG2945         143 -----------------------------------------------------------SFLAPC-PSPGLVIQGDADDV  162 (210)
T ss_pred             -----------------------------------------------------------hhccCC-CCCceeEecChhhh
Confidence                                                                       111222 68999999999998


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH-Hhh
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD-SCF  789 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~-~~l  789 (790)
                      +.+......++.     .+.+++.+++++|+++..-..+.+.+.+|+. ++|
T Consensus       163 v~l~~~l~~~~~-----~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~~r~l  209 (210)
T COG2945         163 VDLVAVLKWQES-----IKITVITIPGADHFFHGKLIELRDTIADFLEDRRL  209 (210)
T ss_pred             hcHHHHHHhhcC-----CCCceEEecCCCceecccHHHHHHHHHHHhhcccc
Confidence            888777766653     5668899999999999888888999999994 554

>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase

Probab=99.57  E-value=1.6e-14  Score=145.46  Aligned_cols=238  Identities=15%  Similarity=0.110  Sum_probs=132.1

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      +.|+||++||.+.+.   ..|.  .....++ .||.|+++|++|+|.+...        .....+.+..+.+..+++.  
T Consensus        12 ~~~~li~~hg~~~~~---~~~~--~~~~~l~-~~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~i~~--   75 (251)
T TIGR02427        12 GAPVLVFINSLGTDL---RMWD--PVLPALT-PDFRVLRYDKRGHGLSDAP--------EGPYSIEDLADDVLALLDH--   75 (251)
T ss_pred             CCCeEEEEcCcccch---hhHH--HHHHHhh-cccEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHH--
Confidence            468999999987652   2232  1223444 6899999999998765321        1123456666666666553  


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR  659 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  659 (790)
                       ++..++.++|||+||.+++.++.++|. .++++++.++....... ..+........  ..........    ......
T Consensus        76 -~~~~~v~liG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~----~~~~~~  146 (251)
T TIGR02427        76 -LGIERAVFCGLSLGGLIAQGLAARRPD-RVRALVLSNTAAKIGTP-ESWNARIAAVR--AEGLAALADA----VLERWF  146 (251)
T ss_pred             -hCCCceEEEEeCchHHHHHHHHHHCHH-HhHHHhhccCccccCch-hhHHHHHhhhh--hccHHHHHHH----HHHHHc
Confidence             345789999999999999999998875 77777776654322110 00000000000  0000000000    000000


Q ss_pred             CCcEEEEeecCCCcc-ChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          660 DKQYLLVHGTMDDNV-HFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                       .+        +... .......+...+......    .      +...............++++ ++|+|+++|++|..
T Consensus       147 -~~--------~~~~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~-~~Pvlii~g~~D~~  206 (251)
T TIGR02427       147 -TP--------GFREAHPARLDLYRNMLVRQPPD----G------YAGCCAAIRDADFRDRLGAI-AVPTLCIAGDQDGS  206 (251)
T ss_pred             -cc--------ccccCChHHHHHHHHHHHhcCHH----H------HHHHHHHHhcccHHHHhhhc-CCCeEEEEeccCCc
Confidence             00        0000 000001111111111100    0      00000011111223556778 89999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      +|.+....+.+.++.    .+++++|+++|.+.. .++.+.+.+.+||+
T Consensus       207 ~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~  251 (251)
T TIGR02427       207 TPPELVREIADLVPG----ARFAEIRGAGHIPCVEQPEAFNAALRDFLR  251 (251)
T ss_pred             CChHHHHHHHHhCCC----ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence            999988888777653    488999999998887 88888889988873

Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.

>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []

Probab=99.56  E-value=9.4e-14  Score=140.62  Aligned_cols=261  Identities=16%  Similarity=0.179  Sum_probs=145.6

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchH-----HHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWN-----LYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~-----~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      ||++|.+.+|+| +..  ..+++|+||..|+................     ...++++||+|+.+|.||.+.++..+..
T Consensus         1 DGv~L~adv~~P-~~~--~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~   77 (272)
T PF02129_consen    1 DGVRLAADVYRP-GAD--GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP   77 (272)
T ss_dssp             TS-EEEEEEEEE---T--TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T
T ss_pred             CCCEEEEEEEec-CCC--CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc
Confidence            789999999999 433  67899999999987643110011000000     1125569999999999999887766543


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhh
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERY  633 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~  633 (790)
                      .     ...+..|..++++|+.. +++-| .||+++|.||+|+.++.+|...|+ .++|++...+..++... ..+....
T Consensus        78 ~-----~~~e~~D~~d~I~W~~~-Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p-~LkAi~p~~~~~d~~~~-~~~~gG~  148 (272)
T PF02129_consen   78 M-----SPNEAQDGYDTIEWIAA-QPWSN-GKVGMYGISYGGFTQWAAAARRPP-HLKAIVPQSGWSDLYRD-SIYPGGA  148 (272)
T ss_dssp             T-----SHHHHHHHHHHHHHHHH-CTTEE-EEEEEEEETHHHHHHHHHHTTT-T-TEEEEEEESE-SBTCCT-SSEETTE
T ss_pred             C-----ChhHHHHHHHHHHHHHh-CCCCC-CeEEeeccCHHHHHHHHHHhcCCC-CceEEEecccCCccccc-chhcCCc
Confidence            2     34679999999999998 67655 599999999999999999997665 89999999988776531 1111100


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhH---HHHHHHHHhcCcchhcccccC-CCCcCCcch
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQS---MMLAKSLQHADIMFQSQRYMG-LPTFEDNLE  709 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~---~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~  709 (790)
                      +...    ....+.....  ........       ...........   ....+........ . ..+.. .........
T Consensus       149 ~~~~----~~~~w~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~  213 (272)
T PF02129_consen  149 FRLG----FFAGWEDLQS--QQEDPQSR-------PAPDRDYLRERARYEALGDSPLGRLPR-D-PPYWDEWLDHPPYDP  213 (272)
T ss_dssp             EBCC----HHHHHHHHHH--HHHHHTCC-------CCSSSHHHHHHHHHHCHHHHHHHHCHG-G-THHHHHHHHT-SSSH
T ss_pred             cccc----chhHHHHHHH--HhhcccCC-------CchhhhhhhhhhhhhhhhhHHHhhhcc-c-cHHHHHHHhCCCcCH
Confidence            0000    0001100000  00000000       00000000000   0000001000000 0 00000 000122345


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcC-CceEEEEcCCCCCc
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD-IMFQSQTYPDEEHG  769 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g-~~~~~~~~p~~~H~  769 (790)
                      .|+..++...++++ ++|+|++.|..|.... ..+.+.++.|+..+ .+.++++-|. +|.
T Consensus       214 ~w~~~~~~~~~~~i-~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw-~H~  271 (272)
T PF02129_consen  214 FWQERSPSERLDKI-DVPVLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPW-THG  271 (272)
T ss_dssp             HHHTTBHHHHHGG---SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred             HHHhCChHHHHhhC-CCCEEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence            66777776778999 9999999999997666 89999999999988 6778888775 674

It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....

>PRK10349 carboxylesterase BioH; Provisional

Probab=99.56  E-value=3.5e-14  Score=143.35  Aligned_cols=238  Identities=18%  Similarity=0.212  Sum_probs=127.2

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|.||++||.+++   ...|..  ....++ ..|.|+++|+||+|.+...         ....++++   ++.+.+ .. 
T Consensus        13 ~~~ivllHG~~~~---~~~w~~--~~~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~~~~~~---~~~l~~-~~-   72 (256)
T PRK10349         13 NVHLVLLHGWGLN---AEVWRC--IDEELS-SHFTLHLVDLPGFGRSRGF---------GALSLADM---AEAVLQ-QA-   72 (256)
T ss_pred             CCeEEEECCCCCC---hhHHHH--HHHHHh-cCCEEEEecCCCCCCCCCC---------CCCCHHHH---HHHHHh-cC-
Confidence            3569999998776   334442  223344 4699999999998765321         11223333   344444 22 


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhh---ccccchhhh
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKI---AALNNKVDR  657 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~  657 (790)
                        .+++.++||||||++++.++.++|. +++.++++++......... +...  .    ......+..   ......+..
T Consensus        73 --~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lili~~~~~~~~~~~-~~~~--~----~~~~~~~~~~~~~~~~~~~~~  142 (256)
T PRK10349         73 --PDKAIWLGWSLGGLVASQIALTHPE-RVQALVTVASSPCFSARDE-WPGI--K----PDVLAGFQQQLSDDFQRTVER  142 (256)
T ss_pred             --CCCeEEEEECHHHHHHHHHHHhChH-hhheEEEecCccceecCCC-CCcc--c----HHHHHHHHHHHHhchHHHHHH
Confidence              4789999999999999999998875 7787777665322211000 0000  0    000000000   000000000


Q ss_pred             ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCc
Q psy463          658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDD  737 (790)
Q Consensus       658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~  737 (790)
                      +.. .     ..............+...+......       ...........+...+....+.++ ++|+|+++|++|.
T Consensus       143 ~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~  208 (256)
T PRK10349        143 FLA-L-----QTMGTETARQDARALKKTVLALPMP-------EVDVLNGGLEILKTVDLRQPLQNV-SMPFLRLYGYLDG  208 (256)
T ss_pred             HHH-H-----HHccCchHHHHHHHHHHHhhccCCC-------cHHHHHHHHHHHHhCccHHHHhhc-CCCeEEEecCCCc
Confidence            000 0     0000000000000111111000000       000000000111122333567788 9999999999999


Q ss_pred             ccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          738 NVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       738 ~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      .+|.+.+..+.+.++..    +++++|++||++.. .++.+.+.+.+|-+
T Consensus       209 ~~~~~~~~~~~~~i~~~----~~~~i~~~gH~~~~e~p~~f~~~l~~~~~  254 (256)
T PRK10349        209 LVPRKVVPMLDKLWPHS----ESYIFAKAAHAPFISHPAEFCHLLVALKQ  254 (256)
T ss_pred             cCCHHHHHHHHHhCCCC----eEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence            99988887777766544    89999999999988 88999999998854

>PRK03592 haloalkane dehalogenase; Provisional

Probab=99.56  E-value=2.8e-13  Score=139.89  Aligned_cols=267  Identities=9%  Similarity=0.012  Sum_probs=138.0

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++...        +  ..|.||++||.+++   ...|..  ....+++. +.|+++|.||.|.+.....      
T Consensus        15 ~g~~i~y~~~--------G--~g~~vvllHG~~~~---~~~w~~--~~~~L~~~-~~via~D~~G~G~S~~~~~------   72 (295)
T PRK03592         15 LGSRMAYIET--------G--EGDPIVFLHGNPTS---SYLWRN--IIPHLAGL-GRCLAPDLIGMGASDKPDI------   72 (295)
T ss_pred             CCEEEEEEEe--------C--CCCEEEEECCCCCC---HHHHHH--HHHHHhhC-CEEEEEcCCCCCCCCCCCC------
Confidence            7777776654        2  22679999999876   333432  23344444 4999999999887543311      


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc---ccccchh--hh
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY---YDTIYSE--RY  633 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~---~~~~~~~--~~  633 (790)
                        ...+.+..+.+..+++..   ..+++.++|||+||.+++.++.++|+ +++.++++++......   .......  ..
T Consensus        73 --~~~~~~~a~dl~~ll~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lil~~~~~~~~~~~~~~~~~~~~~~~  146 (295)
T PRK03592         73 --DYTFADHARYLDAWFDAL---GLDDVVLVGHDWGSALGFDWAARHPD-RVRGIAFMEAIVRPMTWDDFPPAVRELFQA  146 (295)
T ss_pred             --CCCHHHHHHHHHHHHHHh---CCCCeEEEEECHHHHHHHHHHHhChh-heeEEEEECCCCCCcchhhcchhHHHHHHH
Confidence              133455555555555533   34789999999999999999999985 8898888887432111   0000000  00


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhccccc-CCCCcCCcchhhh
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYM-GLPTFEDNLEGYK  712 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~  712 (790)
                      +..+  ......+...  ......+.       ..........+....+...............+. ....-........
T Consensus       147 ~~~~--~~~~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (295)
T PRK03592        147 LRSP--GEGEEMVLEE--NVFIERVL-------PGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVA  215 (295)
T ss_pred             HhCc--ccccccccch--hhHHhhcc-------cCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHh
Confidence            0100  0000000000  00000000       000000001110111111000000000000000 0000000000000


Q ss_pred             -hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          713 -IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       713 -~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                       .......+.++ ++|+|+|+|++|..+++....++...+..   ..++.+++++||.+.. +++++.+.+.+|+.++
T Consensus       216 ~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~  289 (295)
T PRK03592        216 LVEEYAQWLATS-DVPKLLINAEPGAILTTGAIRDWCRSWPN---QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL  289 (295)
T ss_pred             hhhHhHHHhccC-CCCeEEEeccCCcccCcHHHHHHHHHhhh---hcceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence             00112345678 99999999999999966555555444332   2488899999999998 8999999999999875

>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A

Probab=99.56  E-value=1.1e-13  Score=126.26  Aligned_cols=145  Identities=19%  Similarity=0.166  Sum_probs=106.0

Q ss_pred             EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC
Q psy463          503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID  582 (790)
Q Consensus       503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d  582 (790)
                      +||++||..+.   ...|. .+. ..++++||.|+.+|+++.+....              ..+..++++++.....  |
T Consensus         1 ~vv~~HG~~~~---~~~~~-~~~-~~l~~~G~~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~--~   59 (145)
T PF12695_consen    1 VVVLLHGWGGS---RRDYQ-PLA-EALAEQGYAVVAFDYPGHGDSDG--------------ADAVERVLADIRAGYP--D   59 (145)
T ss_dssp             EEEEECTTTTT---THHHH-HHH-HHHHHTTEEEEEESCTTSTTSHH--------------SHHHHHHHHHHHHHHC--T
T ss_pred             CEEEECCCCCC---HHHHH-HHH-HHHHHCCCEEEEEecCCCCccch--------------hHHHHHHHHHHHhhcC--C
Confidence            58899999876   33333 233 34455799999999998765421              1244445555433122  7


Q ss_pred             CCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCc
Q psy463          583 KTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQ  662 (790)
Q Consensus       583 ~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p  662 (790)
                      .++|+++|||+||.+++.++.++  ..++++++.+|..+.                                        
T Consensus        60 ~~~i~l~G~S~Gg~~a~~~~~~~--~~v~~~v~~~~~~~~----------------------------------------   97 (145)
T PF12695_consen   60 PDRIILIGHSMGGAIAANLAARN--PRVKAVVLLSPYPDS----------------------------------------   97 (145)
T ss_dssp             CCEEEEEEETHHHHHHHHHHHHS--TTESEEEEESESSGC----------------------------------------
T ss_pred             CCcEEEEEEccCcHHHHHHhhhc--cceeEEEEecCccch----------------------------------------
Confidence            79999999999999999999977  378888888872110                                        


Q ss_pred             EEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchh
Q psy463          663 YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ  742 (790)
Q Consensus       663 ~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~  742 (790)
                                                                             ..+.+. +.|+|+++|++|..++++
T Consensus        98 -------------------------------------------------------~~~~~~-~~pv~~i~g~~D~~~~~~  121 (145)
T PF12695_consen   98 -------------------------------------------------------EDLAKI-RIPVLFIHGENDPLVPPE  121 (145)
T ss_dssp             -------------------------------------------------------HHHTTT-TSEEEEEEETT-SSSHHH
T ss_pred             -------------------------------------------------------hhhhcc-CCcEEEEEECCCCcCCHH
Confidence                                                                   223345 789999999999999999


Q ss_pred             hhHHHHHHHHhcCCceEEEEcCCCCCc
Q psy463          743 QSMMLAKSLQHADIMFQSQTYPDEEHG  769 (790)
Q Consensus       743 ~~~~l~~~l~~~g~~~~~~~~p~~~H~  769 (790)
                      +...+++.++   .+.+++++++++|+
T Consensus       122 ~~~~~~~~~~---~~~~~~~i~g~~H~  145 (145)
T PF12695_consen  122 QVRRLYEALP---GPKELYIIPGAGHF  145 (145)
T ss_dssp             HHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred             HHHHHHHHcC---CCcEEEEeCCCcCc
Confidence            9999999887   45799999999995

...

>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH

Probab=99.56  E-value=9.4e-14  Score=139.30  Aligned_cols=238  Identities=17%  Similarity=0.166  Sum_probs=126.8

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|.||++||.+++.   ..|.  .....++ .+|.|+++|+||.|.+...         ...   ++.+.++.+.+.   
T Consensus         4 ~~~iv~~HG~~~~~---~~~~--~~~~~l~-~~~~vi~~d~~G~G~s~~~---------~~~---~~~~~~~~~~~~---   62 (245)
T TIGR01738         4 NVHLVLIHGWGMNA---EVFR--CLDEELS-AHFTLHLVDLPGHGRSRGF---------GPL---SLADAAEAIAAQ---   62 (245)
T ss_pred             CceEEEEcCCCCch---hhHH--HHHHhhc-cCeEEEEecCCcCccCCCC---------CCc---CHHHHHHHHHHh---
Confidence            36789999987762   2332  2233444 5799999999998764321         012   333344445441   


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhc---cccchhhh
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIA---ALNNKVDR  657 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~  657 (790)
                      . ..++.++||||||.+++.++.++|. .++++++.++...+.... .+....   .  ......+...   ........
T Consensus        63 ~-~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~il~~~~~~~~~~~-~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~  134 (245)
T TIGR01738        63 A-PDPAIWLGWSLGGLVALHIAATHPD-RVRALVTVASSPCFSARE-DWPEGI---K--PDVLTGFQQQLSDDYQRTIER  134 (245)
T ss_pred             C-CCCeEEEEEcHHHHHHHHHHHHCHH-hhheeeEecCCcccccCC-cccccC---C--HHHHHHHHHHhhhhHHHHHHH
Confidence            2 2689999999999999999998885 788887776643321100 000000   0  0000000000   00000000


Q ss_pred             ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCc
Q psy463          658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDD  737 (790)
Q Consensus       658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~  737 (790)
                      ......   .+....   ......+...+......       ...........+........+.++ ++|+|+++|++|.
T Consensus       135 ~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~  200 (245)
T TIGR01738       135 FLALQT---LGTPTA---RQDARALKQTLLARPTP-------NVQVLQAGLEILATVDLRQPLQNI-SVPFLRLYGYLDG  200 (245)
T ss_pred             HHHHHH---hcCCcc---chHHHHHHHHhhccCCC-------CHHHHHHHHHHhhcccHHHHHhcC-CCCEEEEeecCCc
Confidence            000000   000000   00000111111100000       000000000001111222456788 9999999999999


Q ss_pred             ccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463          738 NVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL  785 (790)
Q Consensus       738 ~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl  785 (790)
                      .+|++..+.+.+.++    .+++.++|++||.+.. +++++.+.+.+|+
T Consensus       201 ~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi  245 (245)
T TIGR01738       201 LVPAKVVPYLDKLAP----HSELYIFAKAAHAPFLSHAEAFCALLVAFK  245 (245)
T ss_pred             ccCHHHHHHHHHhCC----CCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence            999988888877665    3588999999999887 8999999999985

This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.

>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]

Probab=99.55  E-value=2e-13  Score=132.14  Aligned_cols=281  Identities=15%  Similarity=0.107  Sum_probs=160.8

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      ....+..+||..+......++     ...+.|+||.+||..|+.  .+.|...+... +.++||.|+++|.||+++.-. 
T Consensus        50 ~re~v~~pdg~~~~ldw~~~p-----~~~~~P~vVl~HGL~G~s--~s~y~r~L~~~-~~~rg~~~Vv~~~Rgcs~~~n-  120 (345)
T COG0429          50 TRERLETPDGGFIDLDWSEDP-----RAAKKPLVVLFHGLEGSS--NSPYARGLMRA-LSRRGWLVVVFHFRGCSGEAN-  120 (345)
T ss_pred             ceEEEEcCCCCEEEEeeccCc-----cccCCceEEEEeccCCCC--cCHHHHHHHHH-HHhcCCeEEEEecccccCCcc-
Confidence            344666677766665555543     245569999999988874  33344333333 445899999999999876332 


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHH-HHHHHHHhcCCCCceEEEEEeCCCCCcccc----
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG-YATGLALALDPSNVFKCGISVAPVTDWIYY----  625 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG-~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~----  625 (790)
                         ....-+.....+|+...++++.+..+   ..++..+|.|+|| .++.+++..-.+....++++++...++..-    
T Consensus       121 ---~~p~~yh~G~t~D~~~~l~~l~~~~~---~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l  194 (345)
T COG0429         121 ---TSPRLYHSGETEDIRFFLDWLKARFP---PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRL  194 (345)
T ss_pred             ---cCcceecccchhHHHHHHHHHHHhCC---CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHh
Confidence               11222233446999999999987444   5799999999999 666666664444445566655554444211    


Q ss_pred             cccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463          626 DTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE  705 (790)
Q Consensus       626 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  705 (790)
                      +..+..++..     .....+-...   .+.+++   .+  ++..-..+  ....+-++.+...+    ...-.....+.
T Consensus       195 ~~~~s~~ly~-----r~l~~~L~~~---~~~kl~---~l--~~~~p~~~--~~~ik~~~ti~eFD----~~~Tap~~Gf~  255 (345)
T COG0429         195 DSGFSLRLYS-----RYLLRNLKRN---AARKLK---EL--EPSLPGTV--LAAIKRCRTIREFD----DLLTAPLHGFA  255 (345)
T ss_pred             cCchhhhhhH-----HHHHHHHHHH---HHHHHH---hc--CcccCcHH--HHHHHhhchHHhcc----ceeeecccCCC
Confidence            1111101000     0000111110   111111   00  11111111  00011111111111    11111122466


Q ss_pred             CcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cch--HHHH
Q psy463          706 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRP--HFYH  779 (790)
Q Consensus       706 ~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~--~~~~  779 (790)
                      +...+|++.|.+..+.+| .+|+||||...|++++.+..-.....   ....+.+.+-+-.||.-..    ...  -..+
T Consensus       256 da~dYYr~aSs~~~L~~I-r~PtLii~A~DDP~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~  331 (345)
T COG0429         256 DAEDYYRQASSLPLLPKI-RKPTLIINAKDDPFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQ  331 (345)
T ss_pred             cHHHHHHhcccccccccc-ccceEEEecCCCCCCChhhCCcchhc---CCCceEEEeecCCceEEeccCccccchhhHHH
Confidence            888999999999999999 99999999999999987654444332   2345788888888995442    122  3447


Q ss_pred             HHHHHHHHhh
Q psy463          780 TLERFLDSCF  789 (790)
Q Consensus       780 ~i~~fl~~~l  789 (790)
                      .+.+||+..+
T Consensus       332 ri~~~l~~~~  341 (345)
T COG0429         332 RILDWLDPFL  341 (345)
T ss_pred             HHHHHHHHHH
Confidence            8899998765

>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases

Probab=99.54  E-value=1.5e-13  Score=133.96  Aligned_cols=192  Identities=17%  Similarity=0.131  Sum_probs=111.1

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCC---CCChh---hhHhhhhccC-CccchhHHH--
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS---ALKGN---TLKYAGYRRL-GTVEIYDQI--  568 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~---~~~g~---~~~~~~~~~~-~~~~~~D~~--  568 (790)
                      .+..|+||++||.+.+.   +.+.. .....+......++.++.+-.   ...|.   .|........ .....+++.  
T Consensus        11 ~~~~~lvi~LHG~G~~~---~~~~~-~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s   86 (216)
T PF02230_consen   11 GKAKPLVILLHGYGDSE---DLFAL-LAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEES   86 (216)
T ss_dssp             ST-SEEEEEE--TTS-H---HHHHH-HHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHH
T ss_pred             CCCceEEEEECCCCCCc---chhHH-HHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHH
Confidence            45679999999986652   22221 111112234677777765321   00111   2211111011 101122222  


Q ss_pred             -----HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCch
Q psy463          569 -----NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNL  643 (790)
Q Consensus       569 -----~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  643 (790)
                           +.++...+ .+ ++.+||++.|+|+||.+|+.++.++|. .++++++.+|......                   
T Consensus        87 ~~~l~~li~~~~~-~~-i~~~ri~l~GFSQGa~~al~~~l~~p~-~~~gvv~lsG~~~~~~-------------------  144 (216)
T PF02230_consen   87 AERLDELIDEEVA-YG-IDPSRIFLGGFSQGAAMALYLALRYPE-PLAGVVALSGYLPPES-------------------  144 (216)
T ss_dssp             HHHHHHHHHHHHH-TT---GGGEEEEEETHHHHHHHHHHHCTSS-TSSEEEEES---TTGC-------------------
T ss_pred             HHHHHHHHHHHHH-cC-CChhheehhhhhhHHHHHHHHHHHcCc-CcCEEEEeeccccccc-------------------
Confidence                 22333333 44 889999999999999999999999986 8889998888432110                   


Q ss_pred             hhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhcc
Q psy463          644 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRI  723 (790)
Q Consensus       644 ~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  723 (790)
                                                                    ...                         ......
T Consensus       145 ----------------------------------------------~~~-------------------------~~~~~~  153 (216)
T PF02230_consen  145 ----------------------------------------------ELE-------------------------DRPEAL  153 (216)
T ss_dssp             ----------------------------------------------CCH-------------------------CCHCCC
T ss_pred             ----------------------------------------------ccc-------------------------cccccc
Confidence                                                          000                         111122


Q ss_pred             CCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          724 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       724 ~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      .++|+|++||..|+++|.+.++...+.|++.+.++++..|++.+|.+.   .+.++.+.+||++++
T Consensus       154 ~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~---~~~~~~~~~~l~~~~  216 (216)
T PF02230_consen  154 AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS---PEELRDLREFLEKHI  216 (216)
T ss_dssp             CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----HHHHHHHHHHHHHH-
T ss_pred             CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC---HHHHHHHHHHHhhhC
Confidence            168999999999999999999999999999999999999999999985   477888999999874

; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.

>PLN02679 hydrolase, alpha/beta fold family protein

Probab=99.54  E-value=5e-13  Score=141.13  Aligned_cols=253  Identities=12%  Similarity=0.019  Sum_probs=127.7

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|.||++||.+++.   ..|.. + ...++ .+|.|+++|++|+|.+.....       ....+++..+.+..+++.+  
T Consensus        88 gp~lvllHG~~~~~---~~w~~-~-~~~L~-~~~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~~l~~~l~~l--  152 (360)
T PLN02679         88 GPPVLLVHGFGASI---PHWRR-N-IGVLA-KNYTVYAIDLLGFGASDKPPG-------FSYTMETWAELILDFLEEV--  152 (360)
T ss_pred             CCeEEEECCCCCCH---HHHHH-H-HHHHh-cCCEEEEECCCCCCCCCCCCC-------ccccHHHHHHHHHHHHHHh--
Confidence            36799999988762   23332 1 22344 489999999999886543210       0123444444444444423  


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc--ccchhhh-----------cCCCCccCchhhhh
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD--TIYSERY-----------MGLPTFEDNLEGYK  647 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~--~~~~~~~-----------~g~~~~~~~~~~~~  647 (790)
                       ...++.|+||||||.+++.++..+++++++++|++++........  ..+....           +..+  ......+.
T Consensus       153 -~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  229 (360)
T PLN02679        153 -VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR--GIASALFN  229 (360)
T ss_pred             -cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch--hhHHHHHH
Confidence             347899999999999999888643334888888887643211000  0000000           0000  00000000


Q ss_pred             hccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc-hhcccccCCCCcCCcchhhhhhhhhhhhhccCCc
Q psy463          648 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM-FQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDK  726 (790)
Q Consensus       648 ~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  726 (790)
                      ..........+. ..   ..... ..+.    ..+.+........ .....+...      ............+.++ ++
T Consensus       230 ~~~~~~~~~~~~-~~---~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~i-~~  293 (360)
T PLN02679        230 RVKQRDNLKNIL-LS---VYGNK-EAVD----DELVEIIRGPADDEGALDAFVSI------VTGPPGPNPIKLIPRI-SL  293 (360)
T ss_pred             HhcCHHHHHHHH-HH---hccCc-ccCC----HHHHHHHHhhccCCChHHHHHHH------HhcCCCCCHHHHhhhc-CC
Confidence            000000000000 00   00000 0000    0111111000000 000000000      0000000112456788 99


Q ss_pred             cEEEEecCCCcccchhhh-HHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          727 QYLLVHGTMDDNVHFQQS-MMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       727 P~Lii~G~~D~~v~~~~~-~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      |+|+++|++|..+|+... ..+.+.+.+.-.+++++++|++||.++. .++++.+.|.+||++
T Consensus       294 PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~  356 (360)
T PLN02679        294 PILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ  356 (360)
T ss_pred             CEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence            999999999999998743 2333444433335689999999999888 899999999999986

>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily

Probab=99.53  E-value=4.3e-13  Score=138.82  Aligned_cols=123  Identities=15%  Similarity=0.099  Sum_probs=80.5

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      .+...+|.++++....+        ...+.||++||+++...   .  ..+. ..+...+|.|+++|+||+|.+....  
T Consensus         8 ~~~~~~~~~l~y~~~g~--------~~~~~lvllHG~~~~~~---~--~~~~-~~~~~~~~~vi~~D~~G~G~S~~~~--   71 (306)
T TIGR01249         8 YLNVSDNHQLYYEQSGN--------PDGKPVVFLHGGPGSGT---D--PGCR-RFFDPETYRIVLFDQRGCGKSTPHA--   71 (306)
T ss_pred             eEEcCCCcEEEEEECcC--------CCCCEEEEECCCCCCCC---C--HHHH-hccCccCCEEEEECCCCCCCCCCCC--
Confidence            45555788888765422        11245789999877632   1  1111 2233368999999999987654221  


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                          ........++.+.+..+.+++   +..++.++||||||.+++.++.++|. .++++|+.++..
T Consensus        72 ----~~~~~~~~~~~~dl~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~-~v~~lvl~~~~~  130 (306)
T TIGR01249        72 ----CLEENTTWDLVADIEKLREKL---GIKNWLVFGGSWGSTLALAYAQTHPE-VVTGLVLRGIFL  130 (306)
T ss_pred             ----CcccCCHHHHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHHChH-hhhhheeecccc
Confidence                001133566677777776633   34689999999999999999998885 677777766543

This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.

>PRK10673 acyl-CoA esterase; Provisional

Probab=99.53  E-value=1.8e-13  Score=138.33  Aligned_cols=233  Identities=15%  Similarity=0.163  Sum_probs=126.6

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ...|.||++||.++..   ..|.. +... ++ .+|.|+.+|+||+|.+....         ...+++..+.+..+++. 
T Consensus        14 ~~~~~iv~lhG~~~~~---~~~~~-~~~~-l~-~~~~vi~~D~~G~G~s~~~~---------~~~~~~~~~d~~~~l~~-   77 (255)
T PRK10673         14 HNNSPIVLVHGLFGSL---DNLGV-LARD-LV-NDHDIIQVDMRNHGLSPRDP---------VMNYPAMAQDLLDTLDA-   77 (255)
T ss_pred             CCCCCEEEECCCCCch---hHHHH-HHHH-Hh-hCCeEEEECCCCCCCCCCCC---------CCCHHHHHHHHHHHHHH-
Confidence            4458899999998763   23321 2223 33 58999999999987644220         12344444444444442 


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC-CCcccccccchhhhcCCCCccCchhhhhhccccchhhh
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV-TDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDR  657 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  657 (790)
                        +...++.|+||||||.+++.++.++|+ +++++++.++. ..... . .... .            +..      ...
T Consensus        78 --l~~~~~~lvGhS~Gg~va~~~a~~~~~-~v~~lvli~~~~~~~~~-~-~~~~-~------------~~~------~~~  133 (255)
T PRK10673         78 --LQIEKATFIGHSMGGKAVMALTALAPD-RIDKLVAIDIAPVDYHV-R-RHDE-I------------FAA------INA  133 (255)
T ss_pred             --cCCCceEEEEECHHHHHHHHHHHhCHh-hcceEEEEecCCCCccc-h-hhHH-H------------HHH------HHH
Confidence              234679999999999999999998875 78877776431 11100 0 0000 0            000      000


Q ss_pred             ccCCcEEEEeecCCCccChhhHHHHHH-HHHhcCcc-hhcccccCCCCcCCc----chhhhhhhhhhhhhccCCccEEEE
Q psy463          658 IRDKQYLLVHGTMDDNVHFQQSMMLAK-SLQHADIM-FQSQRYMGLPTFEDN----LEGYKIAALNNKVDRIRDKQYLLV  731 (790)
Q Consensus       658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~-~l~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~P~Lii  731 (790)
                      +.  ..    +.    ........... .+...... +....+... .+...    ...+........+.++ ++|+|++
T Consensus       134 ~~--~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i  201 (255)
T PRK10673        134 VS--EA----GA----TTRQQAAAIMRQHLNEEGVIQFLLKSFVDG-EWRFNVPVLWDQYPHIVGWEKIPAW-PHPALFI  201 (255)
T ss_pred             hh--hc----cc----ccHHHHHHHHHHhcCCHHHHHHHHhcCCcc-eeEeeHHHHHHhHHHHhCCcccCCC-CCCeEEE
Confidence            00  00    00    00000000000 00000000 000000000 00000    0011111111234567 8999999


Q ss_pred             ecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          732 HGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       732 ~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      +|++|..++.+.++.+.+.+..    +++.++++++|.... .++.+.+.+.+||.+
T Consensus       202 ~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~  254 (255)
T PRK10673        202 RGGNSPYVTEAYRDDLLAQFPQ----ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND  254 (255)
T ss_pred             ECCCCCCCCHHHHHHHHHhCCC----cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence            9999999998888888776654    488899999998887 888899999999975

>PRK11071 esterase YqiA; Provisional

Probab=99.53  E-value=2.1e-13  Score=129.00  Aligned_cols=186  Identities=16%  Similarity=0.138  Sum_probs=114.4

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhc--CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADN--KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      |.||++||.+++   ...|.......++++  .+|.|+++|.+|.+                   .+..+.+..+.++++
T Consensus         2 p~illlHGf~ss---~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~~   59 (190)
T PRK11071          2 STLLYLHGFNSS---PRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEHG   59 (190)
T ss_pred             CeEEEECCCCCC---cchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHcC
Confidence            679999999887   334443333344432  37999999999842                   123344555555333


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR  659 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  659 (790)
                         .+++.++|+||||++++.++.++|.   + +++.+|..+..    .....+++..     ...+..           
T Consensus        60 ---~~~~~lvG~S~Gg~~a~~~a~~~~~---~-~vl~~~~~~~~----~~~~~~~~~~-----~~~~~~-----------  112 (190)
T PRK11071         60 ---GDPLGLVGSSLGGYYATWLSQCFML---P-AVVVNPAVRPF----ELLTDYLGEN-----ENPYTG-----------  112 (190)
T ss_pred             ---CCCeEEEEECHHHHHHHHHHHHcCC---C-EEEECCCCCHH----HHHHHhcCCc-----ccccCC-----------
Confidence               4689999999999999999998873   2 35566654421    0011111110     000000           


Q ss_pred             CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCccc
Q psy463          660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV  739 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v  739 (790)
                       ..             ..-.......+....+.                         . +. . .+|++++||++|+.|
T Consensus       113 -~~-------------~~~~~~~~~d~~~~~~~-------------------------~-i~-~-~~~v~iihg~~De~V  150 (190)
T PRK11071        113 -QQ-------------YVLESRHIYDLKVMQID-------------------------P-LE-S-PDLIWLLQQTGDEVL  150 (190)
T ss_pred             -Cc-------------EEEcHHHHHHHHhcCCc-------------------------c-CC-C-hhhEEEEEeCCCCcC
Confidence             00             00011122222211111                         1 22 4 789999999999999


Q ss_pred             chhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH
Q psy463          740 HFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD  786 (790)
Q Consensus       740 ~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~  786 (790)
                      |++.+..+++..       +..+++|++|.+.. .+++.+.+.+|+.
T Consensus       151 ~~~~a~~~~~~~-------~~~~~~ggdH~f~~-~~~~~~~i~~fl~  189 (190)
T PRK11071        151 DYRQAVAYYAAC-------RQTVEEGGNHAFVG-FERYFNQIVDFLG  189 (190)
T ss_pred             CHHHHHHHHHhc-------ceEEECCCCcchhh-HHHhHHHHHHHhc
Confidence            999999999842       55688999999973 5888899999975

>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated

Probab=99.53  E-value=4e-13  Score=136.07  Aligned_cols=261  Identities=15%  Similarity=0.078  Sum_probs=142.1

Q ss_pred             EEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-cchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          472 YMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       472 ~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      .+.+.. +|..+.|+++.|.+    +  ..+.||++|||+....  ..+. .......++++||.|+++|++|+|.+...
T Consensus         4 ~~~~~~-~~~~l~g~~~~p~~----~--~~~~vv~i~gg~~~~~--g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~   74 (274)
T TIGR03100         4 ALTFSC-EGETLVGVLHIPGA----S--HTTGVLIVVGGPQYRV--GSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE   74 (274)
T ss_pred             eEEEEc-CCcEEEEEEEcCCC----C--CCCeEEEEeCCccccC--CchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC
Confidence            455555 67889999999964    2  2346777777764311  1111 11123445558999999999998765322


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc-cccc
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY-DTIY  629 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~-~~~~  629 (790)
                      .     ..+ .....|+.++++++.+..+  ..++|+++|||+||.+++.++..+  ..++++|+.+|....... ....
T Consensus        75 ~-----~~~-~~~~~d~~~~~~~l~~~~~--g~~~i~l~G~S~Gg~~a~~~a~~~--~~v~~lil~~p~~~~~~~~~~~~  144 (274)
T TIGR03100        75 N-----LGF-EGIDADIAAAIDAFREAAP--HLRRIVAWGLCDAASAALLYAPAD--LRVAGLVLLNPWVRTEAAQAASR  144 (274)
T ss_pred             C-----CCH-HHHHHHHHHHHHHHHhhCC--CCCcEEEEEECHHHHHHHHHhhhC--CCccEEEEECCccCCcccchHHH
Confidence            1     011 1235788889998876332  236799999999999999987643  378999999886331110 0000


Q ss_pred             hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHH-HHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSM-MLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                      ...+            |... .... ..+  ..  +..|+.+.    .+.. .+...+......       ..   ....
T Consensus       145 ~~~~------------~~~~-~~~~-~~~--~~--~~~g~~~~----~~~~~~~~~~~~~~~~~-------~~---~~~~  192 (274)
T TIGR03100       145 IRHY------------YLGQ-LLSA-DFW--RK--LLSGEVNL----GSSLRGLGDALLKARQK-------GD---EVAH  192 (274)
T ss_pred             HHHH------------HHHH-HhCh-HHH--HH--hcCCCccH----HHHHHHHHHHHHhhhhc-------CC---Cccc
Confidence            0000            0000 0000 000  00  01222111    1111 111111111000       00   0000


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhh-----hHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHH
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQ-----SMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTL  781 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~-----~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i  781 (790)
                      .. ........+..+ ++|+|+++|+.|...+.-.     +....+.+..  ..++++.+|+++|.+..  .++++.+.|
T Consensus       193 ~~-~~~~~~~~l~~~-~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~--~~v~~~~~~~~~H~l~~e~~~~~v~~~i  268 (274)
T TIGR03100       193 GG-LAERMKAGLERF-QGPVLFILSGNDLTAQEFADSVLGEPAWRGALED--PGIERVEIDGADHTFSDRVWREWVAART  268 (274)
T ss_pred             ch-HHHHHHHHHHhc-CCcEEEEEcCcchhHHHHHHHhccChhhHHHhhc--CCeEEEecCCCCcccccHHHHHHHHHHH
Confidence            00 111223556778 8999999999998753111     0222222322  24688999999998865  678999999


Q ss_pred             HHHHHH
Q psy463          782 ERFLDS  787 (790)
Q Consensus       782 ~~fl~~  787 (790)
                      .+||++
T Consensus       269 ~~wL~~  274 (274)
T TIGR03100       269 TEWLRR  274 (274)
T ss_pred             HHHHhC
Confidence            999963

This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.

>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily

Probab=99.53  E-value=6e-13  Score=137.13  Aligned_cols=255  Identities=15%  Similarity=0.101  Sum_probs=129.9

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|.||++||++++..   .|. .....++.+.||.|+.+|.||+|.+.....     ......+++..+.+..+.+.   
T Consensus        25 ~~~vl~~hG~~g~~~---~~~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~---   92 (288)
T TIGR01250        25 KIKLLLLHGGPGMSH---EYL-ENLRELLKEEGREVIMYDQLGCGYSDQPDD-----SDELWTIDYFVDELEEVREK---   92 (288)
T ss_pred             CCeEEEEcCCCCccH---HHH-HHHHHHHHhcCCEEEEEcCCCCCCCCCCCc-----ccccccHHHHHHHHHHHHHH---
Confidence            467889999877631   111 123345554599999999999876432110     00013455666666666653   


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcC-CCCccCchhhhhhccc---cc---
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMG-LPTFEDNLEGYKIAAL---NN---  653 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~---~~---  653 (790)
                      .+..+++++||||||.+++.++.++|. .++.+++.+++.......... ..... .+  ............   ..   
T Consensus        93 ~~~~~~~liG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  168 (288)
T TIGR01250        93 LGLDKFYLLGHSWGGMLAQEYALKYGQ-HLKGLIISSMLDSAPEYVKEL-NRLRKELP--PEVRAAIKRCEASGDYDNPE  168 (288)
T ss_pred             cCCCcEEEEEeehHHHHHHHHHHhCcc-ccceeeEecccccchHHHHHH-HHHHhhcC--hhHHHHHHHHHhccCcchHH
Confidence            334679999999999999999998875 788888877754322110000 00000 00  000000000000   00   


Q ss_pred             hhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCc-chhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEe
Q psy463          654 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH  732 (790)
Q Consensus       654 ~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~  732 (790)
                      ....+.  ..+. ...........    ....+..... .... ...+...+. ....+........+.++ ++|+|+++
T Consensus       169 ~~~~~~--~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~l~~i-~~P~lii~  238 (288)
T TIGR01250       169 YQEAVE--VFYH-HLLCRTRKWPE----ALKHLKSGMNTNVYN-IMQGPNEFT-ITGNLKDWDITDKLSEI-KVPTLLTV  238 (288)
T ss_pred             HHHHHH--HHHH-HhhcccccchH----HHHHHhhccCHHHHh-cccCCcccc-ccccccccCHHHHhhcc-CCCEEEEe
Confidence            000000  0000 00000000000    0000000000 0000 000000000 00011112233556788 99999999


Q ss_pred             cCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          733 GTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       733 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      |+.|. +++.....+.+.+..    +++++++++||.... .++++.+.+.+||+
T Consensus       239 G~~D~-~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~  288 (288)
T TIGR01250       239 GEFDT-MTPEAAREMQELIAG----SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR  288 (288)
T ss_pred             cCCCc-cCHHHHHHHHHhccC----CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence            99998 456777777665543    478899999999887 88999999999974

This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase

>PLN02872 triacylglycerol lipase

Probab=99.52  E-value=1.1e-13  Score=145.20  Aligned_cols=298  Identities=13%  Similarity=0.114  Sum_probs=164.5

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc----chHHHHHhcCCeEEEEEcCCCC
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV----DWNLYLADNKDIVVAYIDGRNS  544 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~----~~~~~~~~~~G~~v~~~d~rG~  544 (790)
                      +.|...+++.||..+....+.+.... ....+.|+|+++||...+   ...|..    ......++++||.|+.+|.||+
T Consensus        43 ~~e~h~v~T~DGy~L~l~ri~~~~~~-~~~~~~~~Vll~HGl~~s---s~~w~~~~~~~sla~~La~~GydV~l~n~RG~  118 (395)
T PLN02872         43 SCTEHTIQTKDGYLLALQRVSSRNPR-LGSQRGPPVLLQHGLFMA---GDAWFLNSPEQSLGFILADHGFDVWVGNVRGT  118 (395)
T ss_pred             CceEEEEECCCCcEEEEEEcCCCCCC-CCCCCCCeEEEeCccccc---ccceeecCcccchHHHHHhCCCCccccccccc
Confidence            46778888999998887666432211 012345789999998765   233321    1233456668999999999997


Q ss_pred             CCC-hhhhHh---hhh--ccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEe
Q psy463          545 ALK-GNTLKY---AGY--RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISV  616 (790)
Q Consensus       545 ~~~-g~~~~~---~~~--~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~  616 (790)
                      +.+ |.....   ..+  ..+.....+|+.++++++.+ .   ...++.++||||||.+++.++. +|.  ..++.+++.
T Consensus       119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~-~---~~~~v~~VGhS~Gg~~~~~~~~-~p~~~~~v~~~~~l  193 (395)
T PLN02872        119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYS-I---TNSKIFIVGHSQGTIMSLAALT-QPNVVEMVEAAALL  193 (395)
T ss_pred             ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHh-c---cCCceEEEEECHHHHHHHHHhh-ChHHHHHHHHHHHh
Confidence            632 211111   111  11222334799999999876 2   2378999999999999986654 553  246677778


Q ss_pred             CCCCCcccccccchh---------h--hcCCCCccCchhhhhhccccchhhhccC------CcEEEEeecCCC----c--
Q psy463          617 APVTDWIYYDTIYSE---------R--YMGLPTFEDNLEGYKIAALNNKVDRIRD------KQYLLVHGTMDD----N--  673 (790)
Q Consensus       617 ~~~~~~~~~~~~~~~---------~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~p~l~~~g~~d~----~--  673 (790)
                      +|+..+......+..         .  .+|...+.........     ....+..      ..+..+.|....    +  
T Consensus       194 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~  268 (395)
T PLN02872        194 CPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVK-----LLDSICEGHMDCNDLLTSITGTNCCFNASRID  268 (395)
T ss_pred             cchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHH-----HHHHHccCchhHHHHHHHHhCCCcccchhhhh
Confidence            887544321111100         0  0111100000000000     0000000      001111221100    0  


Q ss_pred             ---------cChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh-hhhhhhhhhhccC-CccEEEEecCCCcccchh
Q psy463          674 ---------VHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY-KIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQ  742 (790)
Q Consensus       674 ---------v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~-~~P~Lii~G~~D~~v~~~  742 (790)
                               ....+-..+.+ +.+ ...|+...|..   . .+...| +...|...+++++ ++|+++++|++|..+++.
T Consensus       269 ~~~~~~pagtS~k~~~H~~Q-~~~-s~~f~~yDyg~---~-~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~  342 (395)
T PLN02872        269 YYLEYEPHPSSVKNLRHLFQ-MIR-KGTFAHYDYGI---F-KNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVT  342 (395)
T ss_pred             HHHhcCCCcchHHHHHHHHH-HHh-cCCcccCCCCc---h-hhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHH
Confidence                     00111111111 111 11223333321   1 122333 2334556778884 479999999999999999


Q ss_pred             hhHHHHHHHHhcCCceEEEEcCCCCCc--C-CC-cchHHHHHHHHHHHHhh
Q psy463          743 QSMMLAKSLQHADIMFQSQTYPDEEHG--L-IG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       743 ~~~~l~~~l~~~g~~~~~~~~p~~~H~--~-~~-~~~~~~~~i~~fl~~~l  789 (790)
                      .+..+.+.+...   .++..+|+.+|.  + .. .++.+++.|++||++++
T Consensus       343 dv~~l~~~Lp~~---~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~  390 (395)
T PLN02872        343 DVEHTLAELPSK---PELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG  390 (395)
T ss_pred             HHHHHHHHCCCc---cEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence            999998888642   477889999996  3 23 78889999999999875

>PF10503 Esterase_phd: Esterase PHB depolymerase

Probab=99.52  E-value=4.1e-13  Score=127.35  Aligned_cols=129  Identities=22%  Similarity=0.282  Sum_probs=91.5

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-cchHHHHHhcCCeEEEEEcCCCC--CCChhhhHhhhhccC
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNLYLADNKDIVVAYIDGRNS--ALKGNTLKYAGYRRL  559 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~~~~~G~~v~~~d~rG~--~~~g~~~~~~~~~~~  559 (790)
                      |.+.+|.|++..   ..+.|+||++||..+..   +.+. ..-...++.+.||+|+.|+....  ....+.+.. .....
T Consensus         1 l~Y~lYvP~~~~---~~~~PLVv~LHG~~~~a---~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~   73 (220)
T PF10503_consen    1 LSYRLYVPPGAP---RGPVPLVVVLHGCGQSA---EDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQR   73 (220)
T ss_pred             CcEEEecCCCCC---CCCCCEEEEeCCCCCCH---HHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-ccccc
Confidence            457899998653   34789999999987762   2221 11123567778999999996432  122222222 22233


Q ss_pred             CccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          560 GTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       560 ~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      +..+...+...++++.+++ .+|++||.++|+|.||.++..++..+|+ +|+++...+++.
T Consensus        74 g~~d~~~i~~lv~~v~~~~-~iD~~RVyv~G~S~Gg~ma~~la~~~pd-~faa~a~~sG~~  132 (220)
T PF10503_consen   74 GGGDVAFIAALVDYVAARY-NIDPSRVYVTGLSNGGMMANVLACAYPD-LFAAVAVVSGVP  132 (220)
T ss_pred             CccchhhHHHHHHhHhhhc-ccCCCceeeEEECHHHHHHHHHHHhCCc-cceEEEeecccc
Confidence            4456677788899988844 5999999999999999999999999986 999888888763

>PRK07581 hypothetical protein; Validated

Probab=99.52  E-value=2.9e-13  Score=142.49  Aligned_cols=68  Identities=10%  Similarity=-0.038  Sum_probs=59.6

Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCC-CCCcCCC-cchHHHHHHHHHHHHhhC
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPD-EEHGLIG-VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~-~~H~~~~-~~~~~~~~i~~fl~~~l~  790 (790)
                      ..+.++ ++|+|+|+|++|..+|+..+..+.+.++.    .+++++++ +||.... ..+.+.+.|.+||++.|.
T Consensus       269 ~~L~~I-~~PtLvI~G~~D~~~p~~~~~~l~~~ip~----a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~  338 (339)
T PRK07581        269 AALGSI-TAKTFVMPISTDLYFPPEDCEAEAALIPN----AELRPIESIWGHLAGFGQNPADIAFIDAALKELLA  338 (339)
T ss_pred             HHHhcC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence            567788 99999999999999999999888887755    38889998 8998887 899999999999998863

>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []

Probab=99.52  E-value=4.1e-13  Score=136.66  Aligned_cols=246  Identities=20%  Similarity=0.238  Sum_probs=134.2

Q ss_pred             CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC
Q psy463          467 LPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL  546 (790)
Q Consensus       467 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~  546 (790)
                      -...+.+.++.. |.+|.|++.+|.     ..++.|+||++-|.-+.+   ..+. ......++.+|++++.+|.+|.|.
T Consensus       162 ~~~i~~v~iP~e-g~~I~g~LhlP~-----~~~p~P~VIv~gGlDs~q---eD~~-~l~~~~l~~rGiA~LtvDmPG~G~  231 (411)
T PF06500_consen  162 DYPIEEVEIPFE-GKTIPGYLHLPS-----GEKPYPTVIVCGGLDSLQ---EDLY-RLFRDYLAPRGIAMLTVDMPGQGE  231 (411)
T ss_dssp             SSEEEEEEEEET-TCEEEEEEEESS-----SSS-EEEEEEE--TTS-G---GGGH-HHHHCCCHHCT-EEEEE--TTSGG
T ss_pred             CCCcEEEEEeeC-CcEEEEEEEcCC-----CCCCCCEEEEeCCcchhH---HHHH-HHHHHHHHhCCCEEEEEccCCCcc
Confidence            345778888884 599999999998     357889888875543332   1211 112233455999999999999775


Q ss_pred             ChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc
Q psy463          547 KGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD  626 (790)
Q Consensus       547 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~  626 (790)
                      +....   ...    ..-.-..++++|+.+ .+++|..||+++|.|+||+.+..+|..+++ +++++|+.+|+.+-..-+
T Consensus       232 s~~~~---l~~----D~~~l~~aVLd~L~~-~p~VD~~RV~~~G~SfGGy~AvRlA~le~~-RlkavV~~Ga~vh~~ft~  302 (411)
T PF06500_consen  232 SPKWP---LTQ----DSSRLHQAVLDYLAS-RPWVDHTRVGAWGFSFGGYYAVRLAALEDP-RLKAVVALGAPVHHFFTD  302 (411)
T ss_dssp             GTTT----S-S-----CCHHHHHHHHHHHH-STTEEEEEEEEEEETHHHHHHHHHHHHTTT-T-SEEEEES---SCGGH-
T ss_pred             cccCC---CCc----CHHHHHHHHHHHHhc-CCccChhheEEEEeccchHHHHHHHHhccc-ceeeEeeeCchHhhhhcc
Confidence            32110   000    111123467888887 899999999999999999999999876654 888888887764422111


Q ss_pred             ccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCC
Q psy463          627 TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFED  706 (790)
Q Consensus       627 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  706 (790)
                      .   +..-..      +..|...    .+.++.         ..     ......+...+..-+..         .    
T Consensus       303 ~---~~~~~~------P~my~d~----LA~rlG---------~~-----~~~~~~l~~el~~~SLk---------~----  342 (411)
T PF06500_consen  303 P---EWQQRV------PDMYLDV----LASRLG---------MA-----AVSDESLRGELNKFSLK---------T----  342 (411)
T ss_dssp             H---HHHTTS-------HHHHHH----HHHHCT----------S-----CE-HHHHHHHGGGGSTT---------T----
T ss_pred             H---HHHhcC------CHHHHHH----HHHHhC---------Cc-----cCCHHHHHHHHHhcCcc---------h----
Confidence            1   011011      1222111    111111         00     00111122222222211         0    


Q ss_pred             cchhhhhhhhhhhh--hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCC-CcCCCcchHHHHHHHH
Q psy463          707 NLEGYKIAALNNKV--DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEE-HGLIGVRPHFYHTLER  783 (790)
Q Consensus       707 ~~~~~~~~~~~~~~--~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~-H~~~~~~~~~~~~i~~  783 (790)
                                -..+  .+. .+|+|.+.|++|+++|.+....++..    +.+-+...+|... |.   .-+..+..+.+
T Consensus       343 ----------qGlL~~rr~-~~plL~i~~~~D~v~P~eD~~lia~~----s~~gk~~~~~~~~~~~---gy~~al~~~~~  404 (411)
T PF06500_consen  343 ----------QGLLSGRRC-PTPLLAINGEDDPVSPIEDSRLIAES----STDGKALRIPSKPLHM---GYPQALDEIYK  404 (411)
T ss_dssp             ----------TTTTTSS-B-SS-EEEEEETT-SSS-HHHHHHHHHT----BTT-EEEEE-SSSHHH---HHHHHHHHHHH
T ss_pred             ----------hccccCCCC-CcceEEeecCCCCCCCHHHHHHHHhc----CCCCceeecCCCcccc---chHHHHHHHHH
Confidence                      0123  455 89999999999999999988776543    3334666776533 32   34578889999


Q ss_pred             HHHHhh
Q psy463          784 FLDSCF  789 (790)
Q Consensus       784 fl~~~l  789 (790)
                      ||++.|
T Consensus       405 Wl~~~l  410 (411)
T PF06500_consen  405 WLEDKL  410 (411)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998865

This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.

>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases

Probab=99.51  E-value=1.2e-13  Score=134.82  Aligned_cols=202  Identities=22%  Similarity=0.175  Sum_probs=122.8

Q ss_pred             EEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC--CCc
Q psy463          504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL--PYI  581 (790)
Q Consensus       504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~  581 (790)
                      ||++|||++..... .....+...++.+.|+.|+.+|||-++....+           ..++|+.++++|+.++.  -.+
T Consensus         1 v~~~HGGg~~~g~~-~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p-----------~~~~D~~~a~~~l~~~~~~~~~   68 (211)
T PF07859_consen    1 VVYIHGGGWVMGSK-ESHWPFAARLAAERGFVVVSIDYRLAPEAPFP-----------AALEDVKAAYRWLLKNADKLGI   68 (211)
T ss_dssp             EEEE--STTTSCGT-TTHHHHHHHHHHHHTSEEEEEE---TTTSSTT-----------HHHHHHHHHHHHHHHTHHHHTE
T ss_pred             CEEECCcccccCCh-HHHHHHHHHHHhhccEEEEEeecccccccccc-----------ccccccccceeeeccccccccc
Confidence            68999999875422 22334556666668999999999987653322           55899999999999831  137


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCc-ccccccchhhhcCCCCccCchhhhhhccccchhhh
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDW-IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDR  657 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  657 (790)
                      |.++|+|+|+|.||.+++.++.+...   ..++++++.+|+.++ ......+...           ..+..         
T Consensus        69 d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~-----------~~~~~---------  128 (211)
T PF07859_consen   69 DPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDS-----------NENKD---------  128 (211)
T ss_dssp             EEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHH-----------HHHST---------
T ss_pred             cccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccc-----------ccccc---------
Confidence            88999999999999999988865433   258899999998766 1110000000           00000         


Q ss_pred             ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhh--hhccCCccEEEEecCC
Q psy463          658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNK--VDRIRDKQYLLVHGTM  735 (790)
Q Consensus       658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~P~Lii~G~~  735 (790)
                                   +...+......+.+.... +..      ...          ...++...  .++  -.|+++++|+.
T Consensus       129 -------------~~~~~~~~~~~~~~~~~~-~~~------~~~----------~~~sp~~~~~~~~--~Pp~~i~~g~~  176 (211)
T PF07859_consen  129 -------------DPFLPAPKIDWFWKLYLP-GSD------RDD----------PLASPLNASDLKG--LPPTLIIHGED  176 (211)
T ss_dssp             -------------TSSSBHHHHHHHHHHHHS-TGG------TTS----------TTTSGGGSSCCTT--CHEEEEEEETT
T ss_pred             -------------cccccccccccccccccc-ccc------ccc----------ccccccccccccc--CCCeeeecccc
Confidence                         000111111111111110 111      000          01112111  223  37999999999


Q ss_pred             CcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCC
Q psy463          736 DDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLI  771 (790)
Q Consensus       736 D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~  771 (790)
                      |..+  .++..+++.|++.|++++++++++..|.+.
T Consensus       177 D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~  210 (211)
T PF07859_consen  177 DVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFF  210 (211)
T ss_dssp             STTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred             ccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence            9765  588999999999999999999999999864

; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....

>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase

Probab=99.50  E-value=6.5e-13  Score=133.57  Aligned_cols=248  Identities=14%  Similarity=0.063  Sum_probs=126.4

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHH-HHHHHHhCCC
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINV-TRYLQENLPY  580 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~  580 (790)
                      |+||++||.++..   ..|.  .....++ .||.|+.+|.+|.|.+....      ......+++.... +..+.+.   
T Consensus         2 ~~vv~~hG~~~~~---~~~~--~~~~~L~-~~~~v~~~d~~g~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~---   66 (251)
T TIGR03695         2 PVLVFLHGFLGSG---ADWQ--ALIELLG-PHFRCLAIDLPGHGSSQSPD------EIERYDFEEAAQDILATLLDQ---   66 (251)
T ss_pred             CEEEEEcCCCCch---hhHH--HHHHHhc-ccCeEEEEcCCCCCCCCCCC------ccChhhHHHHHHHHHHHHHHH---
Confidence            6799999987762   2332  2233444 79999999999987653321      1111334555544 5555542   


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                      .+..++.++|||+||.+++.++.++|. .++++++.++...+...... ..+....   ......+..............
T Consensus        67 ~~~~~~~l~G~S~Gg~ia~~~a~~~~~-~v~~lil~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  141 (251)
T TIGR03695        67 LGIEPFFLVGYSMGGRIALYYALQYPE-RVQGLILESGSPGLATEEER-AARRQND---EQLAQRFEQEGLEAFLDDWYQ  141 (251)
T ss_pred             cCCCeEEEEEeccHHHHHHHHHHhCch-heeeeEEecCCCCcCchHhh-hhhhhcc---hhhhhHHHhcCccHHHHHHhc
Confidence            345789999999999999999999885 78888887775433210000 0000000   000000000000000111100


Q ss_pred             CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccc
Q psy463          661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH  740 (790)
Q Consensus       661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~  740 (790)
                      .+.+...    ...+......+.......... .......      .............+.++ ++|+|+++|+.|..++
T Consensus       142 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~  209 (251)
T TIGR03695       142 QPLFASQ----KNLPPEQRQALRAKRLANNPE-GLAKMLR------ATGLGKQPSLWPKLQAL-TIPVLYLCGEKDEKFV  209 (251)
T ss_pred             Cceeeec----ccCChHHhHHHHHhcccccch-HHHHHHH------HhhhhcccchHHHhhCC-CCceEEEeeCcchHHH
Confidence            1111000    001111111111110000000 0000000      00000011122446678 9999999999998653


Q ss_pred             hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          741 FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       741 ~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                       ...+.    +.+....++++++|++||.+.. +++++.+.+.+||+
T Consensus       210 -~~~~~----~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~  251 (251)
T TIGR03695       210 -QIAKE----MQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE  251 (251)
T ss_pred             -HHHHH----HHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence             33333    3333345688999999999887 88899999999873

This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.

>KOG4409|consensus

Probab=99.50  E-value=5.7e-13  Score=129.71  Aligned_cols=281  Identities=14%  Similarity=0.012  Sum_probs=147.3

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA  554 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~  554 (790)
                      +...++..+.-....+.      ......+|++||.+.+.+   -|..  .-.-++ ....|.++|..|.|.+.++-...
T Consensus        70 v~i~~~~~iw~~~~~~~------~~~~~plVliHGyGAg~g---~f~~--Nf~~La-~~~~vyaiDllG~G~SSRP~F~~  137 (365)
T KOG4409|consen   70 VRIPNGIEIWTITVSNE------SANKTPLVLIHGYGAGLG---LFFR--NFDDLA-KIRNVYAIDLLGFGRSSRPKFSI  137 (365)
T ss_pred             eecCCCceeEEEeeccc------ccCCCcEEEEeccchhHH---HHHH--hhhhhh-hcCceEEecccCCCCCCCCCCCC
Confidence            34445555555544443      233456789999876632   1111  112234 47899999999988766542211


Q ss_pred             hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc
Q psy463          555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM  634 (790)
Q Consensus       555 ~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~  634 (790)
                         +. ...-...++.++..+...+   ..|..|+|||+|||++..+|.+||+ +++-+|+++|+.-...-+  ....+.
T Consensus       138 ---d~-~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPe-rV~kLiLvsP~Gf~~~~~--~~~~~~  207 (365)
T KOG4409|consen  138 ---DP-TTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPE-RVEKLILVSPWGFPEKPD--SEPEFT  207 (365)
T ss_pred             ---Cc-ccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChH-hhceEEEecccccccCCC--cchhhc
Confidence               11 1112233344443333234   4799999999999999999999996 899999998863222100  000000


Q ss_pred             CCCCccC--chhhhhhccccchhhhccC-CcEEEEeecCCCc--cChhhHHH-HHHHHHhcCcchhcccccCCCC-----
Q psy463          635 GLPTFED--NLEGYKIAALNNKVDRIRD-KQYLLVHGTMDDN--VHFQQSMM-LAKSLQHADIMFQSQRYMGLPT-----  703 (790)
Q Consensus       635 g~~~~~~--~~~~~~~~~~~~~~~~~~~-~p~l~~~g~~d~~--v~~~~~~~-l~~~l~~~~~~~~~~~~~~~~~-----  703 (790)
                      ..+..+-  ....+...+++..++.+-. .|-|+-.-..|..  ++-...++ +.+..-...        ...|.     
T Consensus       208 ~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n--------~~~psgE~~f  279 (365)
T KOG4409|consen  208 KPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCN--------AQNPSGETAF  279 (365)
T ss_pred             CCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhc--------CCCCcHHHHH
Confidence            0000000  0001111112111111110 0101000000000  00000000 011110000        00111     


Q ss_pred             -cCCcchhhhhhhhhhhhhccC-CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHH
Q psy463          704 -FEDNLEGYKIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHT  780 (790)
Q Consensus       704 -~~~~~~~~~~~~~~~~~~~i~-~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~  780 (790)
                       .-....+|.+...++++..++ .+|+++|+|+.|.+ ....+.++.+.+..  ..++.+++|++||.... +++.+.+.
T Consensus       280 k~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~--~~~~~~~v~~aGHhvylDnp~~Fn~~  356 (365)
T KOG4409|consen  280 KNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMK--EYVEIIIVPGAGHHVYLDNPEFFNQI  356 (365)
T ss_pred             HHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhc--ccceEEEecCCCceeecCCHHHHHHH
Confidence             011223455666678888883 49999999999984 55666677666633  34689999999999988 99999999


Q ss_pred             HHHHHHHh
Q psy463          781 LERFLDSC  788 (790)
Q Consensus       781 i~~fl~~~  788 (790)
                      +..++++.
T Consensus       357 v~~~~~~~  364 (365)
T KOG4409|consen  357 VLEECDKV  364 (365)
T ss_pred             HHHHHhcc
Confidence            99998763

>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase

Probab=99.50  E-value=1.1e-12  Score=138.47  Aligned_cols=68  Identities=22%  Similarity=0.149  Sum_probs=57.7

Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEE-EcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQ-TYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~-~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      ..+++| ++|+|+|+|++|..+|+..++.+.+.++.....++++ +++++||..+. .++++.+.|.+||+
T Consensus       282 ~~l~~I-~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~  351 (351)
T TIGR01392       282 EALSRI-KAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR  351 (351)
T ss_pred             HHHhhC-CCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence            567888 9999999999999999999999999998764444443 45789999887 88999999999974

This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.

>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional

Probab=99.50  E-value=3.5e-13  Score=144.50  Aligned_cols=240  Identities=13%  Similarity=0.094  Sum_probs=130.2

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|.||++||.++..   ..|.  .....+. .+|.|+++|++|+|.+...        .....+.++.+.+..+.+.   
T Consensus       131 ~~~vl~~HG~~~~~---~~~~--~~~~~l~-~~~~v~~~d~~g~G~s~~~--------~~~~~~~~~~~~~~~~~~~---  193 (371)
T PRK14875        131 GTPVVLIHGFGGDL---NNWL--FNHAALA-AGRPVIALDLPGHGASSKA--------VGAGSLDELAAAVLAFLDA---  193 (371)
T ss_pred             CCeEEEECCCCCcc---chHH--HHHHHHh-cCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh---
Confidence            47899999987762   2333  2223344 4699999999998765321        0113456666666666653   


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                      ++..+++++|||+||.+++.++.++|. .++++++.+|..........+...+....    ......     ........
T Consensus       194 ~~~~~~~lvG~S~Gg~~a~~~a~~~~~-~v~~lv~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~  263 (371)
T PRK14875        194 LGIERAHLVGHSMGGAVALRLAARAPQ-RVASLTLIAPAGLGPEINGDYIDGFVAAE----SRRELK-----PVLELLFA  263 (371)
T ss_pred             cCCccEEEEeechHHHHHHHHHHhCch-heeEEEEECcCCcCcccchhHHHHhhccc----chhHHH-----HHHHHHhc
Confidence            455789999999999999999998875 78888888775322111111111110000    000000     00000000


Q ss_pred             CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccc
Q psy463          661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH  740 (790)
Q Consensus       661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~  740 (790)
                      .+         ..........+................... .+..   .....+....+.++ ++|+|+++|++|..+|
T Consensus       264 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~l~~i-~~Pvlii~g~~D~~vp  329 (371)
T PRK14875        264 DP---------ALVTRQMVEDLLKYKRLDGVDDALRALADA-LFAG---GRQRVDLRDRLASL-AIPVLVIWGEQDRIIP  329 (371)
T ss_pred             Ch---------hhCCHHHHHHHHHHhccccHHHHHHHHHHH-hccC---cccchhHHHHHhcC-CCCEEEEEECCCCccC
Confidence            00         000000000000000000000000000000 0000   00011222456788 9999999999999999


Q ss_pred             hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          741 FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       741 ~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      +..+..+..       .+++.++|++||.... +++.+.+.|.+||+++
T Consensus       330 ~~~~~~l~~-------~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~  371 (371)
T PRK14875        330 AAHAQGLPD-------GVAVHVLPGAGHMPQMEAAADVNRLLAEFLGKA  371 (371)
T ss_pred             HHHHhhccC-------CCeEEEeCCCCCChhhhCHHHHHHHHHHHhccC
Confidence            887655432       3588899999999887 8889999999999753

>PRK03204 haloalkane dehalogenase; Provisional

Probab=99.50  E-value=3.9e-13  Score=137.40  Aligned_cols=101  Identities=12%  Similarity=0.027  Sum_probs=72.1

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |.||++||.+..   ...|.  .....+. .+|.|+++|++|+|.++..-.       ....+.++.+.+..++++.   
T Consensus        35 ~~iv~lHG~~~~---~~~~~--~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~~~~~---   98 (286)
T PRK03204         35 PPILLCHGNPTW---SFLYR--DIIVALR-DRFRCVAPDYLGFGLSERPSG-------FGYQIDEHARVIGEFVDHL---   98 (286)
T ss_pred             CEEEEECCCCcc---HHHHH--HHHHHHh-CCcEEEEECCCCCCCCCCCCc-------cccCHHHHHHHHHHHHHHh---
Confidence            679999998754   22232  2223444 579999999999886543210       0134677777788777743   


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      +..++.++||||||.++..++..+|. .++.+|+.++.
T Consensus        99 ~~~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~  135 (286)
T PRK03204         99 GLDRYLSMGQDWGGPISMAVAVERAD-RVRGVVLGNTW  135 (286)
T ss_pred             CCCCEEEEEECccHHHHHHHHHhChh-heeEEEEECcc
Confidence            45789999999999999999998886 78888876654

>PRK00175 metX homoserine O-acetyltransferase; Provisional

Probab=99.49  E-value=1.2e-12  Score=139.04  Aligned_cols=70  Identities=19%  Similarity=0.156  Sum_probs=63.0

Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcC-CCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYP-DEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p-~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ..+++| ++|+|+|+|+.|..+|++.++.+.+.++..+..+++++++ ++||.... .++++.+.+.+||.++
T Consensus       303 ~~l~~I-~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~  374 (379)
T PRK00175        303 AALARI-KARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERA  374 (379)
T ss_pred             HHHhcC-CCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhh
Confidence            567889 9999999999999999999999999999877777888775 99999887 8889999999999875

>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional

Probab=99.48  E-value=3.7e-13  Score=134.81  Aligned_cols=100  Identities=14%  Similarity=-0.011  Sum_probs=69.9

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |.||++||.+++.   ..|...  ...+  .+|.|+++|+||+|.+....         ...+.+..+.+..++++.   
T Consensus         3 p~vvllHG~~~~~---~~w~~~--~~~l--~~~~vi~~D~~G~G~S~~~~---------~~~~~~~~~~l~~~l~~~---   63 (242)
T PRK11126          3 PWLVFLHGLLGSG---QDWQPV--GEAL--PDYPRLYIDLPGHGGSAAIS---------VDGFADVSRLLSQTLQSY---   63 (242)
T ss_pred             CEEEEECCCCCCh---HHHHHH--HHHc--CCCCEEEecCCCCCCCCCcc---------ccCHHHHHHHHHHHHHHc---
Confidence            6799999998872   344322  2234  37999999999988754321         113455555555555433   


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      +.+++.++||||||.+++.++.++++..++.+++.++..
T Consensus        64 ~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~  102 (242)
T PRK11126         64 NILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP  102 (242)
T ss_pred             CCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence            357999999999999999999988765588888776543

>PLN02894 hydrolase, alpha/beta fold family protein

Probab=99.48  E-value=3.4e-12  Score=136.15  Aligned_cols=68  Identities=9%  Similarity=-0.008  Sum_probs=54.1

Q ss_pred             hhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          717 NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       717 ~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      ...+.++ ++|+|+++|++|.+.+ .....+.+.+   +..++++++|++||.+.. +++.+.+.+.+|++.+|
T Consensus       318 ~~~l~~I-~vP~liI~G~~D~i~~-~~~~~~~~~~---~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~  386 (402)
T PLN02894        318 LESASEW-KVPTTFIYGRHDWMNY-EGAVEARKRM---KVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL  386 (402)
T ss_pred             hhhcccC-CCCEEEEEeCCCCCCc-HHHHHHHHHc---CCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence            3557788 9999999999998664 5555554443   334689999999999887 89999999999998776

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.48  E-value=7.4e-13  Score=139.28  Aligned_cols=213  Identities=30%  Similarity=0.549  Sum_probs=153.6

Q ss_pred             CccceeecCCceeEeCCCCCceEEEEecCCceeEE------------------EecccCCCCCCCc------CC------
Q psy463            1 MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIM------------------TIPFYGNPGHPSS------QY------   50 (790)
Q Consensus         1 ~~~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~------------------~~~~~g~~~~~~~------~~------   50 (790)
                      +|+|||++...++||||||++|||.+.+++.+..+                  .+|..|.+++.+.      ..      
T Consensus        94 vyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~  173 (353)
T PF00930_consen   94 VYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTEL  173 (353)
T ss_dssp             HHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE
T ss_pred             eccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEe
Confidence            58999999999999999999999999988776554                  4455555543331      00      


Q ss_pred             --CccccCCCCccccccCCCcce--eEeeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccc-cCCceEEE
Q psy463           51 --TQAINLREPVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFS-SDGKKMLL  125 (790)
Q Consensus        51 --~~~~~~~~~~~~~~~w~~~~~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-pdg~~i~~  125 (790)
                        +........+...+.|++++.  .+.|++|.|+...+.+|+..++.|+.+.. +...+|++....+.|. ++|..+++
T Consensus       174 ~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~-e~~~~Wv~~~~~~~~~~~~~~~~l~  252 (353)
T PF00930_consen  174 DPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLE-ETSDGWVDVYDPPHFLGPDGNEFLW  252 (353)
T ss_dssp             ---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEE-EESSSSSSSSSEEEE-TTTSSEEEE
T ss_pred             eeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEE-ecCCcceeeecccccccCCCCEEEE
Confidence              101123355567788997665  66999999999999999999988888774 4567899777777776 99999999


Q ss_pred             EeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccce
Q psy463          126 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDH  205 (790)
Q Consensus       126 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (790)
                      .+.+++          ++|||+++.+++.      .++||.|+|++..+..||++++. +||.+.. ..      +...|
T Consensus       253 ~s~~~G----------~~hly~~~~~~~~------~~~lT~G~~~V~~i~~~d~~~~~-iyf~a~~-~~------p~~r~  308 (353)
T PF00930_consen  253 ISERDG----------YRHLYLYDLDGGK------PRQLTSGDWEVTSILGWDEDNNR-IYFTANG-DN------PGERH  308 (353)
T ss_dssp             EEETTS----------SEEEEEEETTSSE------EEESS-SSS-EEEEEEEECTSSE-EEEEESS-GG------TTSBE
T ss_pred             EEEcCC----------CcEEEEEcccccc------eeccccCceeecccceEcCCCCE-EEEEecC-CC------CCceE
Confidence            998444          7899999998884      67999999999999999998774 5555543 22      23479


Q ss_pred             eEEEecC-CcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEE
Q psy463          206 LTFIDLD-DQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVA  261 (790)
Q Consensus       206 l~~~~~~-~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~  261 (790)
                      ||+++++ +++      ++.||                 ........+++||||+++
T Consensus       309 lY~v~~~~~~~------~~~LT-----------------~~~~~~~~~~~Spdg~y~  342 (353)
T PF00930_consen  309 LYRVSLDSGGE------PKCLT-----------------CEDGDHYSASFSPDGKYY  342 (353)
T ss_dssp             EEEEETTETTE------EEESS-----------------TTSSTTEEEEE-TTSSEE
T ss_pred             EEEEEeCCCCC------eEecc-----------------CCCCCceEEEECCCCCEE
Confidence            9999999 776      66777                 222212689999999943

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PLN02578 hydrolase

Probab=99.48  E-value=7.7e-13  Score=139.59  Aligned_cols=63  Identities=14%  Similarity=0.158  Sum_probs=54.1

Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      ..++++ ++|+|+++|++|..+|...+..+.+.++..    +++++ ++||.++. .++++.+.|.+|++
T Consensus       290 ~~l~~i-~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a----~l~~i-~~GH~~~~e~p~~~~~~I~~fl~  353 (354)
T PLN02578        290 SLLSKL-SCPLLLLWGDLDPWVGPAKAEKIKAFYPDT----TLVNL-QAGHCPHDEVPEQVNKALLEWLS  353 (354)
T ss_pred             HHhhcC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCC----EEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence            456788 999999999999999999988888776543    77777 58999988 99999999999986

>KOG4667|consensus

Probab=99.46  E-value=1.2e-12  Score=117.20  Aligned_cols=239  Identities=18%  Similarity=0.174  Sum_probs=144.6

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +.+.++...+..+.+.+..        .+..-++|++||.-..   .........+..+++.|+.++.+|++|.|.+...
T Consensus        11 ~~ivi~n~~ne~lvg~lh~--------tgs~e~vvlcHGfrS~---Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gs   79 (269)
T KOG4667|consen   11 QKIVIPNSRNEKLVGLLHE--------TGSTEIVVLCHGFRSH---KNAIIMKNVAKALEKEGISAFRFDFSGNGESEGS   79 (269)
T ss_pred             eEEEeccCCCchhhcceec--------cCCceEEEEeeccccc---cchHHHHHHHHHHHhcCceEEEEEecCCCCcCCc
Confidence            3455555556666654432        3344689999998665   2222233344556678999999999998887666


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc----
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD----  626 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~----  626 (790)
                      |....++    .+++|+...++++..    .++.--+|+|||-||.+++.++.++++  +.-++.++|-.+.....    
T Consensus        80 f~~Gn~~----~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d--~~~viNcsGRydl~~~I~eRl  149 (269)
T KOG4667|consen   80 FYYGNYN----TEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHD--IRNVINCSGRYDLKNGINERL  149 (269)
T ss_pred             cccCccc----chHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcC--chheEEcccccchhcchhhhh
Confidence            5443332    456898888888765    334445799999999999999998874  55666666655543221    


Q ss_pred             -ccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463          627 -TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE  705 (790)
Q Consensus       627 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  705 (790)
                       ..+.++.+        ..++....+              ..|.-.+++....   +.+.|.. +..             
T Consensus       150 g~~~l~~ik--------e~Gfid~~~--------------rkG~y~~rvt~eS---lmdrLnt-d~h-------------  190 (269)
T KOG4667|consen  150 GEDYLERIK--------EQGFIDVGP--------------RKGKYGYRVTEES---LMDRLNT-DIH-------------  190 (269)
T ss_pred             cccHHHHHH--------hCCceecCc--------------ccCCcCceecHHH---HHHHHhc-hhh-------------
Confidence             11111111        000100000              0011111221111   1111111 000             


Q ss_pred             CcchhhhhhhhhhhhhccC-CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHH
Q psy463          706 DNLEGYKIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERF  784 (790)
Q Consensus       706 ~~~~~~~~~~~~~~~~~i~-~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~f  784 (790)
                                  ..-.+|+ +||+|-+||..|.+||.+.+.++++.++..    ++.++||++|.+.....++......|
T Consensus       191 ------------~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH----~L~iIEgADHnyt~~q~~l~~lgl~f  254 (269)
T KOG4667|consen  191 ------------EACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNH----KLEIIEGADHNYTGHQSQLVSLGLEF  254 (269)
T ss_pred             ------------hhhcCcCccCceEEEeccCCceeechhHHHHHHhccCC----ceEEecCCCcCccchhhhHhhhccee
Confidence                        1111232 799999999999999999999999998874    89999999999987555555554444


Q ss_pred             H
Q psy463          785 L  785 (790)
Q Consensus       785 l  785 (790)
                      +
T Consensus       255 ~  255 (269)
T KOG4667|consen  255 I  255 (269)
T ss_pred             E
Confidence            3

>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A

Probab=99.46  E-value=3e-13  Score=134.83  Aligned_cols=144  Identities=19%  Similarity=0.280  Sum_probs=87.9

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccc-----------cccccc--cchHHHHHhcCCeE
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQ-----------VTERFS--VDWNLYLADNKDIV  535 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~-----------~~~~~~--~~~~~~~~~~~G~~  535 (790)
                      ..|.+.|...++..+.++++.|.+    ..++.|+||.+||-.+...           +.+.+.  .......++++||+
T Consensus        87 ~~EKv~f~~~p~~~vpaylLvPd~----~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV  162 (390)
T PF12715_consen   87 TREKVEFNTTPGSRVPAYLLVPDG----AKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV  162 (390)
T ss_dssp             EEEEEEE--STTB-EEEEEEEETT------S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred             EEEEEEEEccCCeeEEEEEEecCC----CCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence            456778888889999999999986    3578999999998544310           001111  01122345569999


Q ss_pred             EEEEcCCCCCCChhhh------------H----hhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHH
Q psy463          536 VAYIDGRNSALKGNTL------------K----YAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATG  599 (790)
Q Consensus       536 v~~~d~rG~~~~g~~~------------~----~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~  599 (790)
                      |+++|.+|-|..+..-            .    .....++......|...+++||.+ ++.+|++||+++|+||||+.++
T Consensus       163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~s-lpeVD~~RIG~~GfSmGg~~a~  241 (390)
T PF12715_consen  163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLAS-LPEVDPDRIGCMGFSMGGYRAW  241 (390)
T ss_dssp             EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT--TTEEEEEEEEEEEGGGHHHHH
T ss_pred             EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhc-CcccCccceEEEeecccHHHHH
Confidence            9999998866543210            0    001123333456777789999998 9999999999999999999999


Q ss_pred             HHHhcCCCCceEEEEEeCCC
Q psy463          600 LALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       600 ~~a~~~p~~~~~~~v~~~~~  619 (790)
                      ++++.++  ++++.++.+-+
T Consensus       242 ~LaALDd--RIka~v~~~~l  259 (390)
T PF12715_consen  242 WLAALDD--RIKATVANGYL  259 (390)
T ss_dssp             HHHHH-T--T--EEEEES-B
T ss_pred             HHHHcch--hhHhHhhhhhh
Confidence            9999764  78887776654

>COG4099 Predicted peptidase [General function prediction only]

Probab=99.45  E-value=1.8e-12  Score=121.70  Aligned_cols=179  Identities=18%  Similarity=0.223  Sum_probs=123.3

Q ss_pred             CCCcEEEEEEEeCCCCCCCCCCCc-cEEEEEcCCCCccccccccccc-----hHHHHHhcCCeEEEEEcCCCCCCChhhh
Q psy463          478 QPNMEAQVKLFLPPGIDTSGHKKY-PLLIHVYGGPSSFQVTERFSVD-----WNLYLADNKDIVVAYIDGRNSALKGNTL  551 (790)
Q Consensus       478 ~dg~~i~~~~~~P~~~~~~~~~~~-p~vv~~HG~~~~~~~~~~~~~~-----~~~~~~~~~G~~v~~~d~rG~~~~g~~~  551 (790)
                      ..|.++.+.+|.|+++.  +.++| |+++++||++....  +.....     -.....-+.++-|++|.|--      -|
T Consensus       169 ~tgneLkYrly~Pkdy~--pdkky~PLvlfLHgagq~g~--dn~~~l~sg~gaiawa~pedqcfVlAPQy~~------if  238 (387)
T COG4099         169 STGNELKYRLYTPKDYA--PDKKYYPLVLFLHGAGQGGS--DNDKVLSSGIGAIAWAGPEDQCFVLAPQYNP------IF  238 (387)
T ss_pred             ccCceeeEEEecccccC--CCCccccEEEEEecCCCCCc--hhhhhhhcCccceeeecccCceEEEcccccc------cc
Confidence            35889999999999998  88887 99999999876521  111100     00011112345566666421      01


Q ss_pred             HhhhhccCCccchhHHHHHHH-HHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch
Q psy463          552 KYAGYRRLGTVEIYDQINVTR-YLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS  630 (790)
Q Consensus       552 ~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~  630 (790)
                      .+..  ...........+.++ -+.+ ...+|.+||.++|.|+||+.++.++.++|+ .|++++.++|--+.        
T Consensus       239 ~d~e--~~t~~~l~~~idli~~vlas-~ynID~sRIYviGlSrG~~gt~al~~kfPd-fFAaa~~iaG~~d~--------  306 (387)
T COG4099         239 ADSE--EKTLLYLIEKIDLILEVLAS-TYNIDRSRIYVIGLSRGGFGTWALAEKFPD-FFAAAVPIAGGGDR--------  306 (387)
T ss_pred             cccc--cccchhHHHHHHHHHHHHhh-ccCcccceEEEEeecCcchhhHHHHHhCch-hhheeeeecCCCch--------
Confidence            1100  011123444555565 4445 566999999999999999999999999996 99999988873110        


Q ss_pred             hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463          631 ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG  710 (790)
Q Consensus       631 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  710 (790)
                                  .                                                                   
T Consensus       307 ------------v-------------------------------------------------------------------  307 (387)
T COG4099         307 ------------V-------------------------------------------------------------------  307 (387)
T ss_pred             ------------h-------------------------------------------------------------------
Confidence                        0                                                                   


Q ss_pred             hhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcC
Q psy463          711 YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYP  764 (790)
Q Consensus       711 ~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p  764 (790)
                             ..++.+++.|+.++|+..|.++|.++++.+++.|+..+.++++..|.
T Consensus       308 -------~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~  354 (387)
T COG4099         308 -------YLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL  354 (387)
T ss_pred             -------hhhhhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence                   22333447899999999999999999999999999998888777665

>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A

Probab=99.45  E-value=5.8e-13  Score=131.73  Aligned_cols=221  Identities=17%  Similarity=0.102  Sum_probs=124.3

Q ss_pred             EEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCC
Q psy463          504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDK  583 (790)
Q Consensus       504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~  583 (790)
                      ||++||.+++.   ..|.. +.. .++ +||.|+++|+||.|.+.....      .....+++..+.+..+++..+   .
T Consensus         1 vv~~hG~~~~~---~~~~~-~~~-~l~-~~~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~l~~~l~~~~---~   65 (228)
T PF12697_consen    1 VVFLHGFGGSS---ESWDP-LAE-ALA-RGYRVIAFDLPGHGRSDPPPD------YSPYSIEDYAEDLAELLDALG---I   65 (228)
T ss_dssp             EEEE-STTTTG---GGGHH-HHH-HHH-TTSEEEEEECTTSTTSSSHSS------GSGGSHHHHHHHHHHHHHHTT---T
T ss_pred             eEEECCCCCCH---HHHHH-HHH-HHh-CCCEEEEEecCCccccccccc------cCCcchhhhhhhhhhcccccc---c
Confidence            68999998873   33332 333 445 799999999999876543311      112345555555555555344   3


Q ss_pred             CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc--c---cchhhhcCCCCccCchhhhhhccccchhhhc
Q psy463          584 TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD--T---IYSERYMGLPTFEDNLEGYKIAALNNKVDRI  658 (790)
Q Consensus       584 ~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~--~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  658 (790)
                      .++.++|||+||.+++.++.++|+ .++++++.+|........  .   .+....+...  ......+.....   ....
T Consensus        66 ~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~  139 (228)
T PF12697_consen   66 KKVILVGHSMGGMIALRLAARYPD-RVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWR--SRSLRRLASRFF---YRWF  139 (228)
T ss_dssp             SSEEEEEETHHHHHHHHHHHHSGG-GEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHH--HHHHHHHHHHHH---HHHH
T ss_pred             cccccccccccccccccccccccc-ccccceeecccccccccccccccchhhhhhhhcc--cccccccccccc---cccc
Confidence            789999999999999999999886 899999999887543211  0   0000000000  000000000000   0000


Q ss_pred             cCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       659 ~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                      ..        .............+.+.+...                     .....+...+.++ ++|+|+++|+.|..
T Consensus       140 ~~--------~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~-~~pvl~i~g~~D~~  189 (228)
T PF12697_consen  140 DG--------DEPEDLIRSSRRALAEYLRSN---------------------LWQADLSEALPRI-KVPVLVIHGEDDPI  189 (228)
T ss_dssp             TH--------HHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHGS-SSEEEEEEETTSSS
T ss_pred             cc--------ccccccccccccccccccccc---------------------ccccccccccccc-CCCeEEeecCCCCC
Confidence            00        000000000000000000000                     1122233667888 99999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHH
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYH  779 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~  779 (790)
                      ++.+..+.+.+.+.    .++++++|+++|.+.. +++++.+
T Consensus       190 ~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~p~~~~~  227 (228)
T PF12697_consen  190 VPPESAEELADKLP----NAELVVIPGAGHFLFLEQPDEVAE  227 (228)
T ss_dssp             SHHHHHHHHHHHST----TEEEEEETTSSSTHHHHSHHHHHH
T ss_pred             CCHHHHHHHHHHCC----CCEEEEECCCCCccHHHCHHHHhc
Confidence            99777777776654    4599999999999876 5555543

...

>COG0400 Predicted esterase [General function prediction only]

Probab=99.44  E-value=3.4e-12  Score=119.71  Aligned_cols=185  Identities=17%  Similarity=0.138  Sum_probs=123.7

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccc-------hhHHHHH
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVE-------IYDQINV  570 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~-------~~D~~~~  570 (790)
                      ....|+||++||.+++.   ..+.. +....+.  .+.++.+..+-.-..+..|.  .....+..+       ...+.+.
T Consensus        15 ~p~~~~iilLHG~Ggde---~~~~~-~~~~~~P--~~~~is~rG~v~~~g~~~~f--~~~~~~~~d~edl~~~~~~~~~~   86 (207)
T COG0400          15 DPAAPLLILLHGLGGDE---LDLVP-LPELILP--NATLVSPRGPVAENGGPRFF--RRYDEGSFDQEDLDLETEKLAEF   86 (207)
T ss_pred             CCCCcEEEEEecCCCCh---hhhhh-hhhhcCC--CCeEEcCCCCccccCcccce--eecCCCccchhhHHHHHHHHHHH
Confidence            44568999999987652   22222 2223332  35555554332111111111  001111122       3334455


Q ss_pred             HHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhcc
Q psy463          571 TRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAA  650 (790)
Q Consensus       571 ~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  650 (790)
                      ++.+.++++ +|.+|++++|+|.|+.+++.+..++|. .++++++.+|..-...                          
T Consensus        87 l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~~~-~~~~ail~~g~~~~~~--------------------------  138 (207)
T COG0400          87 LEELAEEYG-IDSSRIILIGFSQGANIALSLGLTLPG-LFAGAILFSGMLPLEP--------------------------  138 (207)
T ss_pred             HHHHHHHhC-CChhheEEEecChHHHHHHHHHHhCch-hhccchhcCCcCCCCC--------------------------
Confidence            555555455 889999999999999999999999885 8888888888532210                          


Q ss_pred             ccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEE
Q psy463          651 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLL  730 (790)
Q Consensus       651 ~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Li  730 (790)
                                                                                         ....+.+.+|+|+
T Consensus       139 -------------------------------------------------------------------~~~~~~~~~pill  151 (207)
T COG0400         139 -------------------------------------------------------------------ELLPDLAGTPILL  151 (207)
T ss_pred             -------------------------------------------------------------------ccccccCCCeEEE
Confidence                                                                               0011122789999


Q ss_pred             EecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          731 VHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       731 i~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      +||+.|++||...+.++.+.|...|.++++..++ .||.+.   .+.++.+..|+...+
T Consensus       152 ~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~---~e~~~~~~~wl~~~~  206 (207)
T COG0400         152 SHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP---PEELEAARSWLANTL  206 (207)
T ss_pred             eccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC---HHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999 799985   477788888988764

>PLN02211 methyl indole-3-acetate methyltransferase

Probab=99.44  E-value=8.7e-12  Score=126.14  Aligned_cols=247  Identities=15%  Similarity=0.110  Sum_probs=125.8

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      +..|.||++||..+..   ..|.  .....+++.||.|+++|++|++.+...   .    .....+++..+.+..++++.
T Consensus        16 ~~~p~vvliHG~~~~~---~~w~--~~~~~L~~~g~~vi~~dl~g~G~s~~~---~----~~~~~~~~~~~~l~~~i~~l   83 (273)
T PLN02211         16 RQPPHFVLIHGISGGS---WCWY--KIRCLMENSGYKVTCIDLKSAGIDQSD---A----DSVTTFDEYNKPLIDFLSSL   83 (273)
T ss_pred             CCCCeEEEECCCCCCc---CcHH--HHHHHHHhCCCEEEEecccCCCCCCCC---c----ccCCCHHHHHHHHHHHHHhc
Confidence            3458899999987662   2232  233455557999999999997753211   0    01133455554454444423


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccch-hhh
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK-VDR  657 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~  657 (790)
                      .  ...++.++||||||.++..++.++|. .++.+|..++......+.. ......+.+.    ............ ...
T Consensus        84 ~--~~~~v~lvGhS~GG~v~~~~a~~~p~-~v~~lv~~~~~~~~~g~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~  155 (273)
T PLN02211         84 P--ENEKVILVGHSAGGLSVTQAIHRFPK-KICLAVYVAATMLKLGFQT-DEDMKDGVPD----LSEFGDVYELGFGLGP  155 (273)
T ss_pred             C--CCCCEEEEEECchHHHHHHHHHhChh-heeEEEEeccccCCCCCCH-HHHHhccccc----hhhhccceeeeeccCC
Confidence            2  23789999999999999999988875 7888887765322111000 0000000000    000000000000 000


Q ss_pred             ccCCcEEEEeec-----CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEe
Q psy463          658 IRDKQYLLVHGT-----MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH  732 (790)
Q Consensus       658 ~~~~p~l~~~g~-----~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~  732 (790)
                      ........+..+     .-...+..........+.....                 .............++.++|+|+|.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~vP~l~I~  218 (273)
T PLN02211        156 DQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPI-----------------LALRSARFEEETGDIDKVPRVYIK  218 (273)
T ss_pred             CCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCc-----------------cccccccccccccccCccceEEEE
Confidence            000000000000     0000011111101000000000                 000000000112233368999999


Q ss_pred             cCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          733 GTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       733 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      |++|..+|++..+.+.+.+...    +++.++ +||..+. .++++...|.++...
T Consensus       219 g~~D~~ip~~~~~~m~~~~~~~----~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~  269 (273)
T PLN02211        219 TLHDHVVKPEQQEAMIKRWPPS----QVYELE-SDHSPFFSTPFLLFGLLIKAAAS  269 (273)
T ss_pred             eCCCCCCCHHHHHHHHHhCCcc----EEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence            9999999999999998876533    677886 7999887 888888888877654

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.44  E-value=1.4e-10  Score=115.40  Aligned_cols=127  Identities=13%  Similarity=0.195  Sum_probs=90.0

Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      |-+++..+++.+++-..-      +.......|||||.++ +++    .        .-+||++|+++|+      ++.+
T Consensus       384 l~iyd~~~~e~kr~e~~l------g~I~av~vs~dGK~~v-vaN----d--------r~el~vididngn------v~~i  438 (668)
T COG4946         384 LGIYDKDGGEVKRIEKDL------GNIEAVKVSPDGKKVV-VAN----D--------RFELWVIDIDNGN------VRLI  438 (668)
T ss_pred             EEEEecCCceEEEeeCCc------cceEEEEEcCCCcEEE-EEc----C--------ceEEEEEEecCCC------eeEe
Confidence            555666666655443321      1234678899999887 443    2        3489999999998      8888


Q ss_pred             cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          353 TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      .+........+.|+|++++|+|.--.+- -.++|-.++.++  ++.-.+|.       ......+++|.|||++++|-..
T Consensus       439 dkS~~~lItdf~~~~nsr~iAYafP~gy-~tq~Iklydm~~--~Kiy~vTT-------~ta~DfsPaFD~d~ryLYfLs~  508 (668)
T COG4946         439 DKSEYGLITDFDWHPNSRWIAYAFPEGY-YTQSIKLYDMDG--GKIYDVTT-------PTAYDFSPAFDPDGRYLYFLSA  508 (668)
T ss_pred             cccccceeEEEEEcCCceeEEEecCcce-eeeeEEEEecCC--CeEEEecC-------CcccccCcccCCCCcEEEEEec
Confidence            7766655545899999999998765532 236777778877  67666665       3456678999999999998765


Q ss_pred             cC
Q psy463          433 GP  434 (790)
Q Consensus       433 ~~  434 (790)
                      +.
T Consensus       509 Rs  510 (668)
T COG4946         509 RS  510 (668)
T ss_pred             cc
Confidence            44

>PLN00021 chlorophyllase

Probab=99.42  E-value=7.2e-12  Score=127.46  Aligned_cols=120  Identities=22%  Similarity=0.159  Sum_probs=83.6

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG  560 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~  560 (790)
                      ..+.+.++.|..     .+.+|+||++||+....   ..|.  .....++++||.|+++|++|.+..+.           
T Consensus        37 ~~~p~~v~~P~~-----~g~~PvVv~lHG~~~~~---~~y~--~l~~~Las~G~~VvapD~~g~~~~~~-----------   95 (313)
T PLN00021         37 PPKPLLVATPSE-----AGTYPVLLFLHGYLLYN---SFYS--QLLQHIASHGFIVVAPQLYTLAGPDG-----------   95 (313)
T ss_pred             CCceEEEEeCCC-----CCCCCEEEEECCCCCCc---ccHH--HHHHHHHhCCCEEEEecCCCcCCCCc-----------
Confidence            457788899973     56789999999987652   2222  23334556899999999987432111           


Q ss_pred             ccchhHHHHHHHHHHHhC-------CCcCCCceEEEEechHHHHHHHHHhcCCC----CceEEEEEeCCCCC
Q psy463          561 TVEIYDQINVTRYLQENL-------PYIDKTRTAIWGWSYGGYATGLALALDPS----NVFKCGISVAPVTD  621 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~~-------~~~d~~ri~i~G~S~GG~~a~~~a~~~p~----~~~~~~v~~~~~~~  621 (790)
                      ...+++..++++|+.+..       ..+|.++++|+|||+||.+++.++..++.    ..++++++..|+..
T Consensus        96 ~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g  167 (313)
T PLN00021         96 TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG  167 (313)
T ss_pred             hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence            123556666677766421       23567899999999999999999987764    25778888888643

>PLN03084 alpha/beta hydrolase fold protein; Provisional

Probab=99.42  E-value=5.1e-12  Score=132.45  Aligned_cols=263  Identities=11%  Similarity=0.022  Sum_probs=136.8

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....        ....|.||++||.+..   ...|..  ....++ .+|.|+++|++|+|.+......    .
T Consensus       113 ~~~~~~y~~~G--------~~~~~~ivllHG~~~~---~~~w~~--~~~~L~-~~~~Via~DlpG~G~S~~p~~~----~  174 (383)
T PLN03084        113 DLFRWFCVESG--------SNNNPPVLLIHGFPSQ---AYSYRK--VLPVLS-KNYHAIAFDWLGFGFSDKPQPG----Y  174 (383)
T ss_pred             CceEEEEEecC--------CCCCCeEEEECCCCCC---HHHHHH--HHHHHh-cCCEEEEECCCCCCCCCCCccc----c
Confidence            66666644331        2234789999999876   233432  223444 5899999999998765432110    0


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc--cccc---chhhh
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY--YDTI---YSERY  633 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~--~~~~---~~~~~  633 (790)
                      .....+.++.+.+..+++..   ..+++.|+|||+||.+++.++.++|. +++.+|+.++......  ....   +....
T Consensus       175 ~~~ys~~~~a~~l~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~~~P~-~v~~lILi~~~~~~~~~~~p~~l~~~~~~l  250 (383)
T PLN03084        175 GFNYTLDEYVSSLESLIDEL---KSDKVSLVVQGYFSPPVVKYASAHPD-KIKKLILLNPPLTKEHAKLPSTLSEFSNFL  250 (383)
T ss_pred             cccCCHHHHHHHHHHHHHHh---CCCCceEEEECHHHHHHHHHHHhChH-hhcEEEEECCCCccccccchHHHHHHHHHH
Confidence            01234666666666666533   34689999999999999999998885 7888888887532110  0000   00000


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCc-chhcccccCCCCcCCcchhhh
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MFQSQRYMGLPTFEDNLEGYK  712 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~  712 (790)
                      ++.        .+. ..+......    . +.  ..................+...+. ..........  .......+.
T Consensus       251 ~~~--------~~~-~~~~~~~~~----~-~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~--~~~~l~~~~  312 (383)
T PLN03084        251 LGE--------IFS-QDPLRASDK----A-LT--SCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRS--MKKELKKYI  312 (383)
T ss_pred             hhh--------hhh-cchHHHHhh----h-hc--ccCccCCCHHHHHHHhccccCCcchHHHHHHHHHH--hhcccchhh
Confidence            000        000 000000000    0 00  000000000000000000000000 0000000000  000000000


Q ss_pred             -hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          713 -IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       713 -~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                       .........++ ++|+|+++|+.|..++.+.++++.+..     +.++.++|+++|.++. .++++.+.|.+||.+
T Consensus       313 ~~l~~~l~~~~i-~vPvLiI~G~~D~~v~~~~~~~~a~~~-----~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~  383 (383)
T PLN03084        313 EEMRSILTDKNW-KTPITVCWGLRDRWLNYDGVEDFCKSS-----QHKLIELPMAGHHVQEDCGEELGGIISGILSK  383 (383)
T ss_pred             HHHHhhhccccC-CCCEEEEeeCCCCCcCHHHHHHHHHhc-----CCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence             00000011357 899999999999999988877776642     3488999999999998 899999999999863

>KOG1838|consensus

Probab=99.41  E-value=3e-11  Score=122.11  Aligned_cols=282  Identities=16%  Similarity=0.091  Sum_probs=160.5

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCC-CCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDT-SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~-~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      -+..-++.+||-.+...++.+....+ ......|+||++||..++.  .+.+.-.+ ...+.+.||.|+++|.||.++..
T Consensus        93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S--~~~YVr~l-v~~a~~~G~r~VVfN~RG~~g~~  169 (409)
T KOG1838|consen   93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGS--HESYVRHL-VHEAQRKGYRVVVFNHRGLGGSK  169 (409)
T ss_pred             ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCC--hhHHHHHH-HHHHHhCCcEEEEECCCCCCCCc
Confidence            34456677788888887776665320 0124679999999988874  23333223 33445689999999999976533


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC--ceEEEEEeCCCCCccccc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN--VFKCGISVAPVTDWIYYD  626 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~--~~~~~v~~~~~~~~~~~~  626 (790)
                      -.    ..+-+-....+|+..+++++..++|   ..++..+|.||||.+...++.+..++  ..+|++..+|+.-...  
T Consensus       170 Lt----Tpr~f~ag~t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~--  240 (409)
T KOG1838|consen  170 LT----TPRLFTAGWTEDLREVVNHIKKRYP---QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAA--  240 (409)
T ss_pred             cC----CCceeecCCHHHHHHHHHHHHHhCC---CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhh--
Confidence            21    1122233457899999999999777   36899999999999998888765532  3445555556432210  


Q ss_pred             ccchhhhcCCCCccCchhhhhhc---cccchhhhccCCcEEEEeecCCCc-cChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          627 TIYSERYMGLPTFEDNLEGYKIA---ALNNKVDRIRDKQYLLVHGTMDDN-VHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       627 ~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~p~l~~~g~~d~~-v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                          .+.+..+   .....|...   ++.+.+..-  .+.++- -..|.. +....+.+-++....          ....
T Consensus       241 ----~~~~~~~---~~~~~y~~~l~~~l~~~~~~~--r~~~~~-~~vd~d~~~~~~SvreFD~~~t----------~~~~  300 (409)
T KOG1838|consen  241 ----SRSIETP---LYRRFYNRALTLNLKRIVLRH--RHTLFE-DPVDFDVILKSRSVREFDEALT----------RPMF  300 (409)
T ss_pred             ----hhHHhcc---cchHHHHHHHHHhHHHHHhhh--hhhhhh-ccchhhhhhhcCcHHHHHhhhh----------hhhc
Confidence                0111000   001111111   000000000  010000 001111 111111111111111          1112


Q ss_pred             CcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----cchHH
Q psy463          703 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----VRPHF  777 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----~~~~~  777 (790)
                      .++....+|++.+..+++++| ++|+|.|+...|+++|.. +.-..+...  ...+-+++-.-.||--..     +...+
T Consensus       301 gf~~~deYY~~aSs~~~v~~I-~VP~L~ina~DDPv~p~~-~ip~~~~~~--np~v~l~~T~~GGHlgfleg~~p~~~~w  376 (409)
T KOG1838|consen  301 GFKSVDEYYKKASSSNYVDKI-KVPLLCINAADDPVVPEE-AIPIDDIKS--NPNVLLVITSHGGHLGFLEGLWPSARTW  376 (409)
T ss_pred             CCCcHHHHHhhcchhhhcccc-cccEEEEecCCCCCCCcc-cCCHHHHhc--CCcEEEEEeCCCceeeeeccCCCccchh
Confidence            355677899999999999999 999999999999999975 222222222  335566666667884332     45566


Q ss_pred             HHH-HHHHHHH
Q psy463          778 YHT-LERFLDS  787 (790)
Q Consensus       778 ~~~-i~~fl~~  787 (790)
                      ++. +.+|+.+
T Consensus       377 ~~~~l~ef~~~  387 (409)
T KOG1838|consen  377 MDKLLVEFLGN  387 (409)
T ss_pred             HHHHHHHHHHH
Confidence            666 7777765

>KOG1454|consensus

Probab=99.40  E-value=9.2e-12  Score=127.46  Aligned_cols=256  Identities=15%  Similarity=0.064  Sum_probs=133.5

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ...|.|+++||+..+   ...|... ...+....|+.|+++|..|.|.++..    ..+.  .+.+.+....+..+....
T Consensus        56 ~~~~pvlllHGF~~~---~~~w~~~-~~~L~~~~~~~v~aiDl~G~g~~s~~----~~~~--~y~~~~~v~~i~~~~~~~  125 (326)
T KOG1454|consen   56 KDKPPVLLLHGFGAS---SFSWRRV-VPLLSKAKGLRVLAIDLPGHGYSSPL----PRGP--LYTLRELVELIRRFVKEV  125 (326)
T ss_pred             CCCCcEEEeccccCC---cccHhhh-ccccccccceEEEEEecCCCCcCCCC----CCCC--ceehhHHHHHHHHHHHhh
Confidence            456889999998875   2333321 11222233699999999996632221    1111  144555555555544422


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEE---EeCCCCCcccccccchhhhcCCCCccCchhhhhhccc----
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGI---SVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAAL----  651 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----  651 (790)
                      .   ..++.++|||+||.+|..+|..+|+ .++.++   ..++...............+...  ...........+    
T Consensus       126 ~---~~~~~lvghS~Gg~va~~~Aa~~P~-~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~  199 (326)
T KOG1454|consen  126 F---VEPVSLVGHSLGGIVALKAAAYYPE-TVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKF--LSALELLIPLSLTEPV  199 (326)
T ss_pred             c---CcceEEEEeCcHHHHHHHHHHhCcc-cccceeeecccccccccCCcchhHHHHhhhhh--ccHhhhcCccccccch
Confidence            2   3569999999999999999999986 777777   34433222111101111111000  000000000000    


Q ss_pred             cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc----chhhh--hhhhhhhhhccCC
Q psy463          652 NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN----LEGYK--IAALNNKVDRIRD  725 (790)
Q Consensus       652 ~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~i~~  725 (790)
                      ......+. ..+..  ...|..+..+....+.   .. ..        ....+.+.    .....  .......+.++.+
T Consensus       200 ~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~---~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  264 (326)
T KOG1454|consen  200 RLVSEGLL-RCLKV--VYTDPSRLLEKLLHLL---SR-PV--------KEHFHRDARLSLFLELLGFDENLLSLIKKIWK  264 (326)
T ss_pred             hheeHhhh-cceee--eccccccchhhhhhhe---ec-cc--------ccchhhhheeeEEEeccCccchHHHhhccccC
Confidence            00000000 00000  0001111111000000   00 00        00000000    00000  1223355667734


Q ss_pred             ccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          726 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       726 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      +|+|+++|.+|..+|.+.+..+.+.+.    .+++.+++++||..+. .++++.+.|..|+..+.
T Consensus       265 ~pvlii~G~~D~~~p~~~~~~~~~~~p----n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~  325 (326)
T KOG1454|consen  265 CPVLIIWGDKDQIVPLELAEELKKKLP----NAELVEIPGAGHLPHLERPEEVAALLRSFIARLR  325 (326)
T ss_pred             CceEEEEcCcCCccCHHHHHHHHhhCC----CceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence            999999999999999998888777663    4599999999999998 89999999999998764

>PRK08775 homoserine O-acetyltransferase; Provisional

Probab=99.40  E-value=5e-12  Score=133.00  Aligned_cols=65  Identities=17%  Similarity=0.028  Sum_probs=56.2

Q ss_pred             hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCC-CCCcCCC-cchHHHHHHHHHHHHh
Q psy463          720 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPD-EEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       720 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~-~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      +.++ ++|+|+++|++|..+|+..+.++.+.+..   ..+++++++ +||.... .++.+.+.+.+||.++
T Consensus       273 l~~I-~~PtLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~  339 (343)
T PRK08775        273 PEAI-RVPTVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLRSPYGHDAFLKETDRIDAILTTALRST  339 (343)
T ss_pred             hhcC-CCCeEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence            5678 99999999999999999998888887732   248899985 9999988 8999999999999875

>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit

Probab=99.40  E-value=5e-12  Score=133.29  Aligned_cols=111  Identities=15%  Similarity=0.005  Sum_probs=71.1

Q ss_pred             EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC
Q psy463          503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID  582 (790)
Q Consensus       503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d  582 (790)
                      .|+++||......+.+..........++++||.|+++|++|++......      .+.....+++.++++++.++.+   
T Consensus        64 pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~------~~~d~~~~~~~~~v~~l~~~~~---  134 (350)
T TIGR01836        64 PLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL------TLDDYINGYIDKCVDYICRTSK---  134 (350)
T ss_pred             cEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC------CHHHHHHHHHHHHHHHHHHHhC---
Confidence            3778888533211111111122333445589999999999865322110      1111223457778888887433   


Q ss_pred             CCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463          583 KTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       583 ~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                      ..++.++||||||.+++.++..+|. .++++++.++..+..
T Consensus       135 ~~~i~lvGhS~GG~i~~~~~~~~~~-~v~~lv~~~~p~~~~  174 (350)
T TIGR01836       135 LDQISLLGICQGGTFSLCYAALYPD-KIKNLVTMVTPVDFE  174 (350)
T ss_pred             CCcccEEEECHHHHHHHHHHHhCch-heeeEEEeccccccC
Confidence            4789999999999999999888875 788888888876653

This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.

>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated

Probab=99.37  E-value=3.4e-11  Score=118.96  Aligned_cols=136  Identities=15%  Similarity=0.023  Sum_probs=91.5

Q ss_pred             EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH
Q psy463          473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK  552 (790)
Q Consensus       473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~  552 (790)
                      +.++...|. +.++++.|.+     .++.|+||++||.++... ............++++||.|+.+|+||+|.+.....
T Consensus         3 ~~l~~~~g~-~~~~~~~p~~-----~~~~~~VlllHG~g~~~~-~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~   75 (266)
T TIGR03101         3 FFLDAPHGF-RFCLYHPPVA-----VGPRGVVIYLPPFAEEMN-KSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA   75 (266)
T ss_pred             EEecCCCCc-EEEEEecCCC-----CCCceEEEEECCCccccc-chhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc
Confidence            445554444 6677777763     234689999999765421 111111122344556899999999999876543321


Q ss_pred             hhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc
Q psy463          553 YAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY  624 (790)
Q Consensus       553 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~  624 (790)
                      ..   .+. ..++|+..+++++.+ .+   ..+|+|+||||||.+++.++.++|. .++.+|+.+|+.+...
T Consensus        76 ~~---~~~-~~~~Dv~~ai~~L~~-~~---~~~v~LvG~SmGG~vAl~~A~~~p~-~v~~lVL~~P~~~g~~  138 (266)
T TIGR03101        76 AA---RWD-VWKEDVAAAYRWLIE-QG---HPPVTLWGLRLGALLALDAANPLAA-KCNRLVLWQPVVSGKQ  138 (266)
T ss_pred             cC---CHH-HHHHHHHHHHHHHHh-cC---CCCEEEEEECHHHHHHHHHHHhCcc-ccceEEEeccccchHH
Confidence            11   111 236788888888876 33   4789999999999999999988875 7888999999876543

This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.

>PRK10115 protease 2; Provisional

Probab=99.35  E-value=9.7e-09  Score=116.54  Aligned_cols=119  Identities=8%  Similarity=0.161  Sum_probs=71.5

Q ss_pred             CcEEEEEeccCcceEEEEEECC-CCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEE
Q psy463          258 SVVAAWVNRVQNRARITRCSIN-EGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFI  336 (790)
Q Consensus       258 g~~~~~~~r~~~~~~i~~~~~~-~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~  336 (790)
                      +.+...++.+.....|..+++. .++.+.|.....  .+.  ...+.++  ++.|++...    .+|      ...|+++
T Consensus       280 ~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~--~~~--i~~~~~~--~~~l~~~~~----~~g------~~~l~~~  343 (686)
T PRK10115        280 HRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRE--NIM--LEGFTLF--TDWLVVEER----QRG------LTSLRQI  343 (686)
T ss_pred             CEEEEEEcCCCCCceEEEecCCCcccCeEEECCCC--CCE--EEEEEEE--CCEEEEEEE----eCC------EEEEEEE
Confidence            3455666666666778888887 455555654421  111  2345565  567775554    567      7789999


Q ss_pred             EcCCCCcccCCCccccc-CCCeEEeEEEeee--cCCCEEEEEEcC-CCCceEEEEEEEcCCCCCCcceeee
Q psy463          337 DLDDQAGIKDKVPVPLT-RGRFTVTEILAWD--EKENNVYFLSTQ-GSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       337 d~~~~~~~~~~~~~~lt-~~~~~~~~~~~~s--~dg~~l~~~~~~-~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                      ++.+++      .+.|+ .....+ .....+  ++++.++|.... ..|  ..+|.+++++  ++.+.|+.
T Consensus       344 ~~~~~~------~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ss~~~P--~~~y~~d~~~--~~~~~l~~  403 (686)
T PRK10115        344 NRKTRE------VIGIAFDDPAYV-TWIAYNPEPETSRLRYGYSSMTTP--DTLFELDMDT--GERRVLKQ  403 (686)
T ss_pred             cCCCCc------eEEecCCCCceE-eeecccCCCCCceEEEEEecCCCC--CEEEEEECCC--CcEEEEEe
Confidence            987665      66665 222222 223344  566667766555 444  7899999877  55555654

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=99.32  E-value=1.5e-09  Score=109.40  Aligned_cols=315  Identities=15%  Similarity=0.132  Sum_probs=151.4

Q ss_pred             eeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccc---cccCCCcceeEeeeecccceeEEEEe
Q psy463           12 ALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLS---RVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus        12 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...|++||++|.|.+..++..++|.|.+..++         +.+||+....   ..-++++.+.+.|....   ..+...
T Consensus        40 ~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~---------i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~---~~l~~v  107 (386)
T PF14583_consen   40 QNCFTDDGRKLLFASDFDGNRNLYLLDLATGE---------ITQLTDGPGDNTFGGFLSPDDRALYYVKNG---RSLRRV  107 (386)
T ss_dssp             S--B-TTS-EEEEEE-TTSS-EEEEEETTT-E---------EEE---SS-B-TTT-EE-TTSSEEEEEETT---TEEEEE
T ss_pred             CCCcCCCCCEEEEEeccCCCcceEEEEcccCE---------EEECccCCCCCccceEEecCCCeEEEEECC---CeEEEE
Confidence            46799999999999999999999999999886         7777775432   22345566665554322   345667


Q ss_pred             eCCCCeeeEEEeecCCCCccccCCcccc--ccCCceEEEEeecCCCCC--CC-------CCCcCCcEEEEEEcCCcCCcc
Q psy463           89 SINEGTCDVVFSRDLDRGWFEPFDHLRF--SSDGKKMLLILSHNQESD--GS-------TPVDSWDHLTFIDLDDQAGIK  157 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--spdg~~i~~~~~~~~~~~--~~-------~~~g~~~~l~~~~~~~~~~~~  157 (790)
                      +..|++.+.+++.+++  |.+   ...|  ..|+.+++..........  ..       |--.--..|..+++.+|+   
T Consensus       108 dL~T~e~~~vy~~p~~--~~g---~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~---  179 (386)
T PF14583_consen  108 DLDTLEERVVYEVPDD--WKG---YGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGE---  179 (386)
T ss_dssp             ETTT--EEEEEE--TT--EEE---EEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT-----
T ss_pred             ECCcCcEEEEEECCcc--ccc---ccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCc---
Confidence            7888888888877643  221   1233  457888777643221100  00       000001348888998884   


Q ss_pred             CCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhh
Q psy463          158 DKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILA  237 (790)
Q Consensus       158 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~  237 (790)
                        ....+....|-  +-.-+.|....+|.|--   ++++..   ....||+++.+++..+++..  +             
T Consensus       180 --~~~v~~~~~wl--gH~~fsP~dp~li~fCH---EGpw~~---Vd~RiW~i~~dg~~~~~v~~--~-------------  234 (386)
T PF14583_consen  180 --RKVVFEDTDWL--GHVQFSPTDPTLIMFCH---EGPWDL---VDQRIWTINTDGSNVKKVHR--R-------------  234 (386)
T ss_dssp             --EEEEEEESS-E--EEEEEETTEEEEEEEEE----S-TTT---SS-SEEEEETTS---EESS-----------------
T ss_pred             --eeEEEecCccc--cCcccCCCCCCEEEEec---cCCcce---eceEEEEEEcCCCcceeeec--C-------------
Confidence              23333333222  12223333333354422   222221   22589999999987555421  1             


Q ss_pred             cccCCCCCCCEEEEEEEccCCcEEEEEe--ccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEE
Q psy463          238 WDEKENNVEPVLSRVNWANESVVAAWVN--RVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLIL  315 (790)
Q Consensus       238 ~~~~~~~~~~~~~~~~wspDg~~~~~~~--r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~  315 (790)
                            ......+.--|+|||+.+.+..  +++....|+.+++++++.+.+...+.       ...+.-|+||+.++==.
T Consensus       235 ------~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p~-------~~H~~ss~Dg~L~vGDG  301 (386)
T PF14583_consen  235 ------MEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMPW-------CSHFMSSPDGKLFVGDG  301 (386)
T ss_dssp             -------TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE-S-------EEEEEE-TTSSEEEEEE
T ss_pred             ------CCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCCc-------eeeeEEcCCCCEEEecC
Confidence                  2345678889999999444432  33445569999999998776655431       23566689999664222


Q ss_pred             ccc-c---ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCC--eE-------Ee-EEEeeecCCCEEEEEEcCCCC
Q psy463          316 SHN-Q---ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR--FT-------VT-EILAWDEKENNVYFLSTQGSP  381 (790)
Q Consensus       316 ~~~-~---~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~--~~-------~~-~~~~~s~dg~~l~~~~~~~~~  381 (790)
                      +.. .   +..|. -+....-||++++..+.      ...|....  +.       +. -.++|+|||++|+|.++..++
T Consensus       302 ~d~p~~v~~~~~~-~~~~~p~i~~~~~~~~~------~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~  374 (386)
T PF14583_consen  302 GDAPVDVADAGGY-KIENDPWIYLFDVEAGR------FRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGP  374 (386)
T ss_dssp             --------------------EEEEEETTTTE------EEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS
T ss_pred             CCCCccccccccc-eecCCcEEEEeccccCc------eeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCC
Confidence            200 0   00010 00112367888887665      33333221  11       11 138999999999999999332


Q ss_pred             ceEEEEEEEcCC
Q psy463          382 IVQHMYRINIAD  393 (790)
Q Consensus       382 ~~~~l~~~~~~~  393 (790)
                        ..||.+.+..
T Consensus       375 --~~vY~v~i~~  384 (386)
T PF14583_consen  375 --PAVYLVEIPD  384 (386)
T ss_dssp             ---EEEEEE--C
T ss_pred             --ccEEEEeCcc
Confidence              7999998753

>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH

Probab=99.30  E-value=2.1e-11  Score=117.30  Aligned_cols=177  Identities=16%  Similarity=0.160  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCch
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNL  643 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  643 (790)
                      ++-+..+++||.+ .+.++.++|+|+|.|.||-+|+.++.++|  .++++|+.+|..-.......+...-  .      +
T Consensus         3 LEyfe~Ai~~L~~-~p~v~~~~Igi~G~SkGaelALllAs~~~--~i~avVa~~ps~~~~~~~~~~~~~~--~------~   71 (213)
T PF08840_consen    3 LEYFEEAIDWLKS-HPEVDPDKIGIIGISKGAELALLLASRFP--QISAVVAISPSSVVFQGIGFYRDSS--K------P   71 (213)
T ss_dssp             CHHHHHHHHHHHC-STTB--SSEEEEEETHHHHHHHHHHHHSS--SEEEEEEES--SB--SSEEEETTE----------E
T ss_pred             hHHHHHHHHHHHh-CCCCCCCCEEEEEECHHHHHHHHHHhcCC--CccEEEEeCCceeEecchhcccCCC--c------c
Confidence            3445678999998 89999999999999999999999999987  7999999888543221100010000  0      0


Q ss_pred             hhhhhccccchhhhcc-CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhc
Q psy463          644 EGYKIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDR  722 (790)
Q Consensus       644 ~~~~~~~~~~~~~~~~-~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (790)
                      -.+.....    .... ..+..+..                                 ...+......... ...-.+++
T Consensus        72 lp~~~~~~----~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~-~a~IpvE~  113 (213)
T PF08840_consen   72 LPYLPFDI----SKFSWNEPGLLRS---------------------------------RYAFELADDKAVE-EARIPVEK  113 (213)
T ss_dssp             E----B-G----GG-EE-TTS-EE----------------------------------TT-B--TTTGGGC-CCB--GGG
T ss_pred             CCcCCcCh----hhceecCCcceeh---------------------------------hhhhhcccccccc-cccccHHH
Confidence            00000000    0000 00000000                                 0000000000000 00023778


Q ss_pred             cCCccEEEEecCCCcccchh-hhHHHHHHHHhcCCc--eEEEEcCCCCCcCCC---------c-----------------
Q psy463          723 IRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIM--FQSQTYPDEEHGLIG---------V-----------------  773 (790)
Q Consensus       723 i~~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~--~~~~~~p~~~H~~~~---------~-----------------  773 (790)
                      + ++|+|+++|+.|...|.. .+..+.+.|++++.+  ++.+.||++||.+..         .                 
T Consensus       114 i-~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~  192 (213)
T PF08840_consen  114 I-KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAH  192 (213)
T ss_dssp             ---SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHH
T ss_pred             c-CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHH
Confidence            8 999999999999999854 556778889998875  788999999998742         0                 


Q ss_pred             ---chHHHHHHHHHHHHhhC
Q psy463          774 ---RPHFYHTLERFLDSCFA  790 (790)
Q Consensus       774 ---~~~~~~~i~~fl~~~l~  790 (790)
                         .++.++.+++||+++|.
T Consensus       193 a~A~~dsW~~~l~Fl~~~L~  212 (213)
T PF08840_consen  193 AKAQEDSWKKILEFLRKHLG  212 (213)
T ss_dssp             HHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHhC
Confidence               13677999999999984

Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.

>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding

Probab=99.29  E-value=8.4e-11  Score=145.41  Aligned_cols=260  Identities=12%  Similarity=0.037  Sum_probs=134.4

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|+||++||.+++.   ..|.. +. ..+. .+|.|+.+|+||+|.+................++++.+.+..++++  
T Consensus      1370 ~~~~vVllHG~~~s~---~~w~~-~~-~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~-- 1441 (1655)
T PLN02980       1370 EGSVVLFLHGFLGTG---EDWIP-IM-KAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH-- 1441 (1655)
T ss_pred             CCCeEEEECCCCCCH---HHHHH-HH-HHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH--
Confidence            347899999998873   33432 22 2343 4699999999998765422100000001123456666666655553  


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR  659 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  659 (790)
                       ++.+++.|+||||||.+++.++.++|. +++.+++.++...+..... ...+....   ....................
T Consensus      1442 -l~~~~v~LvGhSmGG~iAl~~A~~~P~-~V~~lVlis~~p~~~~~~~-~~~~~~~~---~~~~~~l~~~g~~~~~~~~~ 1515 (1655)
T PLN02980       1442 -ITPGKVTLVGYSMGARIALYMALRFSD-KIEGAVIISGSPGLKDEVA-RKIRSAKD---DSRARMLIDHGLEIFLENWY 1515 (1655)
T ss_pred             -hCCCCEEEEEECHHHHHHHHHHHhChH-hhCEEEEECCCCccCchHH-HHHHhhhh---hHHHHHHHhhhHHHHHHHhc
Confidence             335789999999999999999999986 7887777765432211000 00000000   00000000000000000000


Q ss_pred             CCcEEEEeecCCCccChhhHHHHH-HHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          660 DKQYLLVHGTMDDNVHFQQSMMLA-KSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v~~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                      ...+.     ........ ..... ..+...... ......      ..............+.++ ++|+|+|+|++|..
T Consensus      1516 ~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~l------~~~~~~~~~dl~~~L~~I-~~PtLlI~Ge~D~~ 1581 (1655)
T PLN02980       1516 SGELW-----KSLRNHPH-FNKIVASRLLHKDVP-SLAKLL------SDLSIGRQPSLWEDLKQC-DTPLLLVVGEKDVK 1581 (1655)
T ss_pred             cHHHh-----hhhccCHH-HHHHHHHHHhcCCHH-HHHHHH------HHhhhcccchHHHHHhhC-CCCEEEEEECCCCc
Confidence            00000     00000000 00000 000000000 000000      000000011122557888 99999999999997


Q ss_pred             cchhhhHHHHHHHHhcC--------CceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          739 VHFQQSMMLAKSLQHAD--------IMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g--------~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ++ ..+.++.+.+.+..        ..++++++|++||..+. +++.+.+.|.+||.+.
T Consensus      1582 ~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980       1582 FK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred             cH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence            75 66677777766531        12589999999999988 8999999999999864

>PRK06765 homoserine O-acetyltransferase; Provisional

Probab=99.28  E-value=9.8e-11  Score=123.10  Aligned_cols=71  Identities=14%  Similarity=0.079  Sum_probs=62.6

Q ss_pred             hhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCC-CCCcCCC-cchHHHHHHHHHHHH
Q psy463          716 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPD-EEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       716 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~-~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      +...+.++ ++|+|+|+|+.|..+|+..++++.+.++..+..++++++++ .||..+. .++++.+.|.+||++
T Consensus       315 l~~~L~~I-~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~  387 (389)
T PRK06765        315 LEEALSNI-EANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR  387 (389)
T ss_pred             HHHHHhcC-CCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence            34667789 99999999999999999999999999987666789999985 8999887 889999999999975

>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.25  E-value=2.1e-10  Score=109.31  Aligned_cols=134  Identities=23%  Similarity=0.245  Sum_probs=93.4

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCC-CC--CChhhhHhhh
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRN-SA--LKGNTLKYAG  555 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG-~~--~~g~~~~~~~  555 (790)
                      +|...++++|.|+...    .+.|+||++||+.++.......+ . ...++++.||.|+.||... +-  .....+....
T Consensus        43 ~g~~r~y~l~vP~g~~----~~apLvv~LHG~~~sgag~~~~s-g-~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~  116 (312)
T COG3509          43 NGLKRSYRLYVPPGLP----SGAPLVVVLHGSGGSGAGQLHGT-G-WDALADREGFLVAYPDGYDRAWNANGCGNWFGPA  116 (312)
T ss_pred             CCCccceEEEcCCCCC----CCCCEEEEEecCCCChHHhhccc-c-hhhhhcccCcEEECcCccccccCCCcccccCCcc
Confidence            7888999999999854    33499999999887633222222 2 2356677899999996432 11  0011110111


Q ss_pred             hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       556 ~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      ...-+..++..+.+.+..+..+++ +|+.||+|.|.|.||.|+..++..+|+ .|+++..+++..
T Consensus       117 ~~~~g~ddVgflr~lva~l~~~~g-idp~RVyvtGlS~GG~Ma~~lac~~p~-~faa~A~VAg~~  179 (312)
T COG3509         117 DRRRGVDDVGFLRALVAKLVNEYG-IDPARVYVTGLSNGGRMANRLACEYPD-IFAAIAPVAGLL  179 (312)
T ss_pred             cccCCccHHHHHHHHHHHHHHhcC-cCcceEEEEeeCcHHHHHHHHHhcCcc-cccceeeeeccc
Confidence            123344567777888888887455 999999999999999999999999885 898888777653

>KOG2984|consensus

Probab=99.22  E-value=3.2e-11  Score=106.74  Aligned_cols=245  Identities=14%  Similarity=0.099  Sum_probs=134.9

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++.+.-+        +. +--.|+.+-|..++.  ...|..... .+.....+.|++.|.+|.|.+-.+-+..    
T Consensus        29 ng~ql~y~~~--------G~-G~~~iLlipGalGs~--~tDf~pql~-~l~k~l~~TivawDPpGYG~SrPP~Rkf----   92 (277)
T KOG2984|consen   29 NGTQLGYCKY--------GH-GPNYILLIPGALGSY--KTDFPPQLL-SLFKPLQVTIVAWDPPGYGTSRPPERKF----   92 (277)
T ss_pred             cCceeeeeec--------CC-CCceeEecccccccc--cccCCHHHH-hcCCCCceEEEEECCCCCCCCCCCcccc----
Confidence            6777776654        22 223466777776653  222332211 2222234889999999966432221110    


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                      -...-..|..++++.|.+    ++..++.|+|||-||..++.+|+++++..-+-+|..++. .....+...-+   |.  
T Consensus        93 ~~~ff~~Da~~avdLM~a----Lk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~a-yvn~~~~ma~k---gi--  162 (277)
T KOG2984|consen   93 EVQFFMKDAEYAVDLMEA----LKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAA-YVNHLGAMAFK---GI--  162 (277)
T ss_pred             hHHHHHHhHHHHHHHHHH----hCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccc-eecchhHHHHh---ch--
Confidence            011235677777877776    567899999999999999999999886433334433331 11100000000   00  


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhc-CcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA-DIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                                ..+..+..... .|+.-..|-.-   -..+-..+++..... +..              ..+. ..    
T Consensus       163 ----------Rdv~kWs~r~R-~P~e~~Yg~e~---f~~~wa~wvD~v~qf~~~~--------------dG~f-Cr----  209 (277)
T KOG2984|consen  163 ----------RDVNKWSARGR-QPYEDHYGPET---FRTQWAAWVDVVDQFHSFC--------------DGRF-CR----  209 (277)
T ss_pred             ----------HHHhhhhhhhc-chHHHhcCHHH---HHHHHHHHHHHHHHHhhcC--------------CCch-Hh----
Confidence                      00000000000 11111111000   001111122211110 000              0000 11    


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ..+.++ +||+||+||+.|+.|+-.++--+-+.++.+    ++.++|..+|.++. -++++...+++||++
T Consensus       210 ~~lp~v-kcPtli~hG~kDp~~~~~hv~fi~~~~~~a----~~~~~peGkHn~hLrya~eFnklv~dFl~~  275 (277)
T KOG2984|consen  210 LVLPQV-KCPTLIMHGGKDPFCGDPHVCFIPVLKSLA----KVEIHPEGKHNFHLRYAKEFNKLVLDFLKS  275 (277)
T ss_pred             hhcccc-cCCeeEeeCCcCCCCCCCCccchhhhcccc----eEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence            446788 999999999999999988887777666655    88999999999997 899999999999986

>KOG3043|consensus

Probab=99.21  E-value=4.1e-10  Score=102.45  Aligned_cols=166  Identities=16%  Similarity=0.178  Sum_probs=117.7

Q ss_pred             HHHHHhcCCeEEEEEcCC-C---CCCChh-hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHH
Q psy463          525 NLYLADNKDIVVAYIDGR-N---SALKGN-TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATG  599 (790)
Q Consensus       525 ~~~~~~~~G~~v~~~d~r-G---~~~~g~-~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~  599 (790)
                      ....++..||.|+.||+- |   +..... .......+.-......++...++||.. .  -+..+|+++|.+|||-++.
T Consensus        59 ~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~-~--g~~kkIGv~GfCwGak~vv  135 (242)
T KOG3043|consen   59 GADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKN-H--GDSKKIGVVGFCWGAKVVV  135 (242)
T ss_pred             HHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHH-c--CCcceeeEEEEeecceEEE
Confidence            344555679999999975 4   111011 111111111122347888999999986 3  3468999999999998887


Q ss_pred             HHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhH
Q psy463          600 LALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQS  679 (790)
Q Consensus       600 ~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~  679 (790)
                      .+...++  .|.++++..|..-                                                          
T Consensus       136 ~~~~~~~--~f~a~v~~hps~~----------------------------------------------------------  155 (242)
T KOG3043|consen  136 TLSAKDP--EFDAGVSFHPSFV----------------------------------------------------------  155 (242)
T ss_pred             Eeeccch--hheeeeEecCCcC----------------------------------------------------------
Confidence            7666554  6666666655210                                                          


Q ss_pred             HHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCC-ce
Q psy463          680 MMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MF  758 (790)
Q Consensus       680 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-~~  758 (790)
                                + .                         ..+.++ ++|+|++.|+.|..+|+....++.+.+++... ..
T Consensus       156 ----------d-~-------------------------~D~~~v-k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~  198 (242)
T KOG3043|consen  156 ----------D-S-------------------------ADIANV-KAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGS  198 (242)
T ss_pred             ----------C-h-------------------------hHHhcC-CCCEEEEeecccccCCHHHHHHHHHHHhcCcccce
Confidence                      0 0                         446677 89999999999999999999999999887643 34


Q ss_pred             EEEEcCCCCCcCCC------------cchHHHHHHHHHHHHhhC
Q psy463          759 QSQTYPDEEHGLIG------------VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       759 ~~~~~p~~~H~~~~------------~~~~~~~~i~~fl~~~l~  790 (790)
                      ++.+|+|.+|++..            ..++.++.++.||+++++
T Consensus       199 ~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~~  242 (242)
T KOG3043|consen  199 QVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYLA  242 (242)
T ss_pred             eEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhhC
Confidence            78999999999872            235788999999999874

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.21  E-value=3.2e-08  Score=102.49  Aligned_cols=241  Identities=14%  Similarity=0.142  Sum_probs=138.8

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...|+|||+.++......            +.|+++++.+++     ....+..+.. + ....++++++  .+|++...
T Consensus        35 ~l~~~~dg~~l~~~~~~~------------~~v~~~d~~~~~-----~~~~~~~~~~-~-~~~~~~~~g~--~l~~~~~~   93 (300)
T TIGR03866        35 GITLSKDGKLLYVCASDS------------DTIQVIDLATGE-----VIGTLPSGPD-P-ELFALHPNGK--ILYIANED   93 (300)
T ss_pred             ceEECCCCCEEEEEECCC------------CeEEEEECCCCc-----EEEeccCCCC-c-cEEEECCCCC--EEEEEcCC
Confidence            468999999876654322            279999988764     2233333221 2 2346777665  45554321


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                                ...|+++|+.+++..     ..+.                  .......+.|+|||++++......  ..
T Consensus        94 ----------~~~l~~~d~~~~~~~-----~~~~------------------~~~~~~~~~~~~dg~~l~~~~~~~--~~  138 (300)
T TIGR03866        94 ----------DNLVTVIDIETRKVL-----AEIP------------------VGVEPEGMAVSPDGKIVVNTSETT--NM  138 (300)
T ss_pred             ----------CCeEEEEECCCCeEE-----eEee------------------CCCCcceEEECCCCCEEEEEecCC--Ce
Confidence                      147888888765321     1111                  011234689999999665554432  23


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      ++.++..+++.........      ......|+|||+.|++ .+   ..+|        .|+++|+++++.     .+.+
T Consensus       139 ~~~~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~-~~---~~~~--------~v~i~d~~~~~~-----~~~~  195 (300)
T TIGR03866       139 AHFIDTKTYEIVDNVLVDQ------RPRFAEFTADGKELWV-SS---EIGG--------TVSVIDVATRKV-----IKKI  195 (300)
T ss_pred             EEEEeCCCCeEEEEEEcCC------CccEEEECCCCCEEEE-Ec---CCCC--------EEEEEEcCccee-----eeee
Confidence            5667887776543222111      1236889999998874 33   2344        688999987751     2333


Q ss_pred             cCC-------CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCc
Q psy463          353 TRG-------RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVS  425 (790)
Q Consensus       353 t~~-------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~  425 (790)
                      +..       ...... +.|+||++.+++.....    ..+.++++.+  ++......       .......+.|+|+|+
T Consensus       196 ~~~~~~~~~~~~~~~~-i~~s~dg~~~~~~~~~~----~~i~v~d~~~--~~~~~~~~-------~~~~~~~~~~~~~g~  261 (300)
T TIGR03866       196 TFEIPGVHPEAVQPVG-IKLTKDGKTAFVALGPA----NRVAVVDAKT--YEVLDYLL-------VGQRVWQLAFTPDEK  261 (300)
T ss_pred             eecccccccccCCccc-eEECCCCCEEEEEcCCC----CeEEEEECCC--CcEEEEEE-------eCCCcceEEECCCCC
Confidence            211       111112 67899999876654332    3577778765  44332211       122456789999999


Q ss_pred             EEEEEeecCCCCeEEEEecCCCe
Q psy463          426 YYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       426 ~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                      +++...  ..-..|.++|+++++
T Consensus       262 ~l~~~~--~~~~~i~v~d~~~~~  282 (300)
T TIGR03866       262 YLLTTN--GVSNDVSVIDVAALK  282 (300)
T ss_pred             EEEEEc--CCCCeEEEEECCCCc
Confidence            886542  223468999988754

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>PRK05855 short chain dehydrogenase; Validated

Probab=99.19  E-value=2.2e-10  Score=131.09  Aligned_cols=62  Identities=16%  Similarity=0.052  Sum_probs=50.5

Q ss_pred             hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          721 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       721 ~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ..+ ++|+|+++|++|..+|+.....+.+.+..    .++++++ +||..+. +++.+.+.|.+|+.+.
T Consensus       230 ~~~-~~P~lii~G~~D~~v~~~~~~~~~~~~~~----~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~  292 (582)
T PRK05855        230 RYT-DVPVQLIVPTGDPYVRPALYDDLSRWVPR----LWRREIK-AGHWLPMSHPQVLAAAVAEFVDAV  292 (582)
T ss_pred             CCc-cCceEEEEeCCCcccCHHHhccccccCCc----ceEEEcc-CCCcchhhChhHHHHHHHHHHHhc
Confidence            347 89999999999999999888877655442    3667776 5999887 8889999999999763

>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I

Probab=99.18  E-value=4.5e-10  Score=121.32  Aligned_cols=128  Identities=13%  Similarity=0.065  Sum_probs=77.7

Q ss_pred             EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-cchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC
Q psy463          482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG  560 (790)
Q Consensus       482 ~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~  560 (790)
                      .+..+.|.|..    .....+.|+++|+......+.+--. ..+..++++ +||.|+++|.+|.+.....+      .+.
T Consensus       173 ~~eLi~Y~P~t----~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~-qGf~V~~iDwrgpg~s~~~~------~~d  241 (532)
T TIGR01838       173 LFQLIQYEPTT----ETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVE-QGHTVFVISWRNPDASQADK------TFD  241 (532)
T ss_pred             cEEEEEeCCCC----CcCCCCcEEEECcccccceeeecccchHHHHHHHH-CCcEEEEEECCCCCcccccC------Chh
Confidence            34555666653    1223455778898654322211111 124444554 89999999999976543221      111


Q ss_pred             ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHH----HHHhcCCCCceEEEEEeCCCCCcc
Q psy463          561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATG----LALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~----~~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                      .+..+++.++++.+.+.   .+..++.++||||||.+++    .++..+++++++.++..+...++.
T Consensus       242 dY~~~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~  305 (532)
T TIGR01838       242 DYIRDGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFS  305 (532)
T ss_pred             hhHHHHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCC
Confidence            23345677888888763   3468899999999999852    234444334788888777766654

This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.

>PRK10439 enterobactin/ferric enterobactin esterase; Provisional

Probab=99.13  E-value=2.5e-09  Score=113.16  Aligned_cols=206  Identities=17%  Similarity=0.150  Sum_probs=123.1

Q ss_pred             eEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCC----eEEEEEcCCCC
Q psy463          470 VEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKD----IVVAYIDGRNS  544 (790)
Q Consensus       470 ~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G----~~v~~~d~rG~  544 (790)
                      ...+.+.+. -|.+...++|.|.++.   .+++|+|+++||......   .........+.+ .|    .+|+.+|....
T Consensus       180 ~~~~~~~S~~Lg~~r~v~VY~P~~y~---~~~~PvlyllDG~~w~~~---~~~~~~ld~li~-~g~i~P~ivV~id~~~~  252 (411)
T PRK10439        180 AKEIIWKSERLGNSRRVWIYTTGDAA---PEERPLAILLDGQFWAES---MPVWPALDSLTH-RGQLPPAVYLLIDAIDT  252 (411)
T ss_pred             eEEEEEEccccCCceEEEEEECCCCC---CCCCCEEEEEECHHhhhc---CCHHHHHHHHHH-cCCCCceEEEEECCCCc
Confidence            344455543 3677888999998864   457999999999765421   111122223333 34    45788876322


Q ss_pred             CCChhhhHhhhhccCCccchh-HH-HHHHHHHHHhCCC-cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          545 ALKGNTLKYAGYRRLGTVEIY-DQ-INVTRYLQENLPY-IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       545 ~~~g~~~~~~~~~~~~~~~~~-D~-~~~~~~l~~~~~~-~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      .........  .     ..+. .+ .+.+-++.++++. .|+++.+|+|+||||+.|++++.++|+ .|.++++.+|...
T Consensus       253 ~~R~~el~~--~-----~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd-~Fg~v~s~Sgs~w  324 (411)
T PRK10439        253 THRSQELPC--N-----ADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPE-RFGCVLSQSGSFW  324 (411)
T ss_pred             ccccccCCc--h-----HHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcc-cccEEEEecccee
Confidence            111111100  0     0111 11 1233444444442 467899999999999999999999986 9999999998532


Q ss_pred             cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463          622 WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL  701 (790)
Q Consensus       622 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~  701 (790)
                      |...              .....                                   ..+.+.+....           
T Consensus       325 w~~~--------------~~~~~-----------------------------------~~l~~~l~~~~-----------  344 (411)
T PRK10439        325 WPHR--------------GGQQE-----------------------------------GVLLEQLKAGE-----------  344 (411)
T ss_pred             cCCc--------------cCCch-----------------------------------hHHHHHHHhcc-----------
Confidence            2100              00000                                   00111111100           


Q ss_pred             CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCC
Q psy463          702 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLI  771 (790)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~  771 (790)
                                        ...- ...++|.+|+.|..+ ....+.+.+.|+++|.++++.+++| ||...
T Consensus       345 ------------------~~~~-~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~  393 (411)
T PRK10439        345 ------------------VSAR-GLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHDAL  393 (411)
T ss_pred             ------------------cCCC-CceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcCHH
Confidence                              0011 456888899998644 5677999999999999999999998 79554

>COG2936 Predicted acyl esterases [General function prediction only]

Probab=99.13  E-value=1.6e-09  Score=114.72  Aligned_cols=139  Identities=17%  Similarity=0.207  Sum_probs=103.3

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-cchHH--HHHhcCCeEEEEEcCCCCCCC
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNL--YLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~--~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ..+.++.+||++|...+|+|.+     .++.|+++..+-.|........+. .....  ..++++||+|+..|.||.+++
T Consensus        20 ~~v~V~MRDGvrL~~dIy~Pa~-----~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~S   94 (563)
T COG2936          20 RDVMVPMRDGVRLAADIYRPAG-----AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGS   94 (563)
T ss_pred             eeeeEEecCCeEEEEEEEccCC-----CCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccC
Confidence            4567888999999999999984     578899998884443321000110 11111  245559999999999998877


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW  622 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~  622 (790)
                      ...+...     ...+++|-.+.|+|+.+ +++-| .+|+++|.||+|+.++++|+..|+ ..|+++...+..+.
T Consensus        95 eG~~~~~-----~~~E~~Dg~D~I~Wia~-QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pP-aLkai~p~~~~~D~  161 (563)
T COG2936          95 EGVFDPE-----SSREAEDGYDTIEWLAK-QPWSN-GNVGMLGLSYLGFTQLAAAALQPP-ALKAIAPTEGLVDR  161 (563)
T ss_pred             Cccccee-----ccccccchhHHHHHHHh-CCccC-CeeeeecccHHHHHHHHHHhcCCc-hheeeccccccccc
Confidence            6554321     11478899999999998 88766 589999999999999999998776 88998888887764

>KOG2564|consensus

Probab=99.12  E-value=1.3e-09  Score=102.21  Aligned_cols=117  Identities=21%  Similarity=0.068  Sum_probs=74.9

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+.+.++..++ ++..++..|+      ...-|++++.||++.+.   -.|. .+...+.......++++|.||+|..--
T Consensus        50 kedv~i~~~~~-t~n~Y~t~~~------~t~gpil~l~HG~G~S~---LSfA-~~a~el~s~~~~r~~a~DlRgHGeTk~  118 (343)
T KOG2564|consen   50 KEDVSIDGSDL-TFNVYLTLPS------ATEGPILLLLHGGGSSA---LSFA-IFASELKSKIRCRCLALDLRGHGETKV  118 (343)
T ss_pred             ccccccCCCcc-eEEEEEecCC------CCCccEEEEeecCcccc---hhHH-HHHHHHHhhcceeEEEeeccccCcccc
Confidence            34444444333 6777777774      34569999999998763   2333 245566666677889999999987543


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL  604 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~  604 (790)
                      +......   ......|+.+.++++   ++. ...+|.++||||||.+|.+.+..
T Consensus       119 ~~e~dlS---~eT~~KD~~~~i~~~---fge-~~~~iilVGHSmGGaIav~~a~~  166 (343)
T KOG2564|consen  119 ENEDDLS---LETMSKDFGAVIKEL---FGE-LPPQIILVGHSMGGAIAVHTAAS  166 (343)
T ss_pred             CChhhcC---HHHHHHHHHHHHHHH---hcc-CCCceEEEeccccchhhhhhhhh
Confidence            3222110   113456666666665   332 34689999999999999877653

>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases

Probab=99.11  E-value=3.9e-11  Score=119.02  Aligned_cols=224  Identities=17%  Similarity=0.081  Sum_probs=118.8

Q ss_pred             eEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEE
Q psy463          534 IVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCG  613 (790)
Q Consensus       534 ~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~  613 (790)
                      |.|+++|.||.+.+...    ...........|+.+.++.+++.++   .+++.++||||||.+++.++..+|+ +++.+
T Consensus         1 f~vi~~d~rG~g~S~~~----~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~-~v~~l   72 (230)
T PF00561_consen    1 FDVILFDLRGFGYSSPH----WDPDFPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE-RVKKL   72 (230)
T ss_dssp             EEEEEEECTTSTTSSSC----CGSGSCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG-GEEEE
T ss_pred             CEEEEEeCCCCCCCCCC----ccCCcccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch-hhcCc
Confidence            68999999998875521    0112233568888999999888555   4569999999999999999999997 99999


Q ss_pred             EEeCCCCCccc--ccccchh-hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcC
Q psy463          614 ISVAPVTDWIY--YDTIYSE-RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD  690 (790)
Q Consensus       614 v~~~~~~~~~~--~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~  690 (790)
                      ++.+++.....  -...+.. ......  ......+.............. .   ........+...........+....
T Consensus        73 vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~  146 (230)
T PF00561_consen   73 VLISPPPDLPDGLWNRIWPRGNLQGQL--LDNFFNFLSDPIKPLLGRWPK-Q---FFAYDREFVEDFLKQFQSQQYARFA  146 (230)
T ss_dssp             EEESESSHHHHHHHHHCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-H---HHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred             EEEeeeccchhhhhHHHHhhhhhhhhH--HHhhhccccccchhhhhhhhh-h---eeeccCccccchhhccchhhhhHHH
Confidence            98888621000  0000000 000000  000000000000000000000 0   0000000000000000000000000


Q ss_pred             cchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcC
Q psy463          691 IMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGL  770 (790)
Q Consensus       691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~  770 (790)
                      ......     ..+......+........+.++ ++|+|+++|+.|..+|+.....+.+.+..    .++++++++||..
T Consensus       147 ~~~~~~-----~~~~~~~~~~~~~~~~~~l~~i-~~p~l~i~~~~D~~~p~~~~~~~~~~~~~----~~~~~~~~~GH~~  216 (230)
T PF00561_consen  147 ETDAFD-----NMFWNALGYFSVWDPSPALSNI-KVPTLIIWGEDDPLVPPESSEQLAKLIPN----SQLVLIEGSGHFA  216 (230)
T ss_dssp             HHHHHH-----HHHHHHHHHHHHHHHHHHHTTT-TSEEEEEEETTCSSSHHHHHHHHHHHSTT----EEEEEETTCCSTH
T ss_pred             HHHHHh-----hhcccccccccccccccccccc-CCCeEEEEeCCCCCCCHHHHHHHHHhcCC----CEEEECCCCChHH
Confidence            000000     0000112233444455667788 99999999999999999999998777765    4899999999988


Q ss_pred             CC-cchHHHHHH
Q psy463          771 IG-VRPHFYHTL  781 (790)
Q Consensus       771 ~~-~~~~~~~~i  781 (790)
                      .. ..+++.+.+
T Consensus       217 ~~~~~~~~~~~i  228 (230)
T PF00561_consen  217 FLEGPDEFNEII  228 (230)
T ss_dssp             HHHSHHHHHHHH
T ss_pred             HhcCHHhhhhhh
Confidence            76 555555544

; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....

>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases

Probab=99.09  E-value=1e-09  Score=110.88  Aligned_cols=64  Identities=22%  Similarity=0.142  Sum_probs=53.8

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcC-CceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD-IMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g-~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      +.|++|.||..|.+||+..+..+++.++.+| .++++..+++.+|....  .......+.||.+.|+
T Consensus       219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~--~~~~~~a~~Wl~~rf~  283 (290)
T PF03583_consen  219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA--FASAPDALAWLDDRFA  283 (290)
T ss_pred             CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh--hcCcHHHHHHHHHHHC
Confidence            7999999999999999999999999999999 79999999999997642  1223566677777653

Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process

>KOG4627|consensus

Probab=99.06  E-value=1.4e-09  Score=96.77  Aligned_cols=227  Identities=15%  Similarity=0.045  Sum_probs=140.8

Q ss_pred             hccCCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcC
Q psy463          462 LTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDG  541 (790)
Q Consensus       462 ~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~  541 (790)
                      +++...++.+.+.+-- +| .....++.|.+       ..|++|++|||-+..... .-+... ...+.++||+|+.++|
T Consensus        37 Lkn~~i~r~e~l~Yg~-~g-~q~VDIwg~~~-------~~klfIfIHGGYW~~g~r-k~clsi-v~~a~~~gY~vasvgY  105 (270)
T KOG4627|consen   37 LKNKQIIRVEHLRYGE-GG-RQLVDIWGSTN-------QAKLFIFIHGGYWQEGDR-KMCLSI-VGPAVRRGYRVASVGY  105 (270)
T ss_pred             hhhccccchhccccCC-CC-ceEEEEecCCC-------CccEEEEEecchhhcCch-hcccch-hhhhhhcCeEEEEecc
Confidence            3444444455443322 23 22334455543       347999999998764311 111112 2234458999999998


Q ss_pred             CCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          542 RNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       542 rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      --++. +..         ....+.++...++|+.+..+  +.+++.+.|||.|+.+++.+..|..+.++.+++..+|+.+
T Consensus       106 ~l~~q-~ht---------L~qt~~~~~~gv~filk~~~--n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~  173 (270)
T KOG4627|consen  106 NLCPQ-VHT---------LEQTMTQFTHGVNFILKYTE--NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD  173 (270)
T ss_pred             CcCcc-ccc---------HHHHHHHHHHHHHHHHHhcc--cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence            65442 211         12557888899999988444  4567999999999999999998877778889999998876


Q ss_pred             cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463          622 WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL  701 (790)
Q Consensus       622 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~  701 (790)
                      +.-....-....+|..                                      -.+++       ..+..         
T Consensus       174 l~EL~~te~g~dlgLt--------------------------------------~~~ae-------~~Scd---------  199 (270)
T KOG4627|consen  174 LRELSNTESGNDLGLT--------------------------------------ERNAE-------SVSCD---------  199 (270)
T ss_pred             HHHHhCCccccccCcc--------------------------------------cchhh-------hcCcc---------
Confidence            5421100000000110                                      00000       00111         


Q ss_pred             CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----cchH
Q psy463          702 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----VRPH  776 (790)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----~~~~  776 (790)
                                     +..++.+ +.|+|++.+++|..-..++.+.+.+.+.++    .+..|++.+|.-..     +...
T Consensus       200 ---------------l~~~~~v-~~~ilVv~~~~espklieQnrdf~~q~~~a----~~~~f~n~~hy~I~~~~~~~~s~  259 (270)
T KOG4627|consen  200 ---------------LWEYTDV-TVWILVVAAEHESPKLIEQNRDFADQLRKA----SFTLFKNYDHYDIIEETAIDDSD  259 (270)
T ss_pred             ---------------HHHhcCc-eeeeeEeeecccCcHHHHhhhhHHHHhhhc----ceeecCCcchhhHHHHhccccch
Confidence                           1445667 899999999999888899999999998876    78899999996532     3344


Q ss_pred             HHHHHHHHH
Q psy463          777 FYHTLERFL  785 (790)
Q Consensus       777 ~~~~i~~fl  785 (790)
                      .+..+..|+
T Consensus       260 ~~~~~~~~~  268 (270)
T KOG4627|consen  260 VSRFLRNIE  268 (270)
T ss_pred             HHHHHHHHh
Confidence            455555443

>KOG2382|consensus

Probab=99.06  E-value=3e-09  Score=104.04  Aligned_cols=61  Identities=13%  Similarity=0.152  Sum_probs=54.8

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      ..|+|+++|.++..++.++-.++.+.++.    +++.+++++||+++. +++.+.+.|.+|+..+.
T Consensus       253 ~~pvlfi~g~~S~fv~~~~~~~~~~~fp~----~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~  314 (315)
T KOG2382|consen  253 TGPVLFIKGLQSKFVPDEHYPRMEKIFPN----VEVHELDEAGHWVHLEKPEEFIESISEFLEEPE  314 (315)
T ss_pred             ccceeEEecCCCCCcChhHHHHHHHhccc----hheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence            79999999999999998888888777765    589999999999998 99999999999998653

>PRK07868 acyl-CoA synthetase; Validated

Probab=99.03  E-value=5.4e-09  Score=125.21  Aligned_cols=65  Identities=12%  Similarity=0.081  Sum_probs=54.7

Q ss_pred             hhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEE-EEcCCCCCcCCC----cchHHHHHHHHHHHHh
Q psy463          719 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQS-QTYPDEEHGLIG----VRPHFYHTLERFLDSC  788 (790)
Q Consensus       719 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~-~~~p~~~H~~~~----~~~~~~~~i~~fl~~~  788 (790)
                      .+.+| ++|+|+++|++|.++|++.++.+.+.+...    ++ .+++++||....    .+++++..+.+||.++
T Consensus       292 ~L~~i-~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a----~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~  361 (994)
T PRK07868        292 TLADI-TCPVLAFVGEVDDIGQPASVRGIRRAAPNA----EVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL  361 (994)
T ss_pred             chhhC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCC----eEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence            46788 999999999999999999999998877544    55 577899998653    6788999999999875

>KOG0271|consensus

Probab=99.03  E-value=4.5e-08  Score=95.27  Aligned_cols=104  Identities=15%  Similarity=0.205  Sum_probs=71.1

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .....+..+.+||||++++..+-+..   +.+.+..+|+--..+     ++.+......+||.|.+-|+ ..+    ++.
T Consensus       365 gHq~lVn~V~fSPd~r~IASaSFDkS---VkLW~g~tGk~lasf-----RGHv~~VYqvawsaDsRLlV-S~S----kDs  431 (480)
T KOG0271|consen  365 GHQALVNHVSFSPDGRYIASASFDKS---VKLWDGRTGKFLASF-----RGHVAAVYQVAWSADSRLLV-SGS----KDS  431 (480)
T ss_pred             chhhheeeEEECCCccEEEEeecccc---eeeeeCCCcchhhhh-----hhccceeEEEEeccCccEEE-EcC----CCc
Confidence            55566789999999998877665432   777777777543222     22223355789999998554 665    333


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEE
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYF  374 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~  374 (790)
                              .|-++++.+.+     ....|.....++.. +.|+|||.+++-
T Consensus       432 --------TLKvw~V~tkK-----l~~DLpGh~DEVf~-vDwspDG~rV~s  468 (480)
T KOG0271|consen  432 --------TLKVWDVRTKK-----LKQDLPGHADEVFA-VDWSPDGQRVAS  468 (480)
T ss_pred             --------eEEEEEeeeee-----ecccCCCCCceEEE-EEecCCCceeec
Confidence                    68888888877     23347666667765 899999997643

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.99  E-value=1.8e-06  Score=90.63  Aligned_cols=185  Identities=16%  Similarity=0.130  Sum_probs=96.8

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ......+.++|||++++..+.+.+.-.+|.++..+++...........+  ...+...|+|||+.+| +..   +..+  
T Consensus       143 ~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G--~GPRh~~f~pdg~~~Y-v~~---e~s~--  214 (345)
T PF10282_consen  143 GPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPG--SGPRHLAFSPDGKYAY-VVN---ELSN--  214 (345)
T ss_dssp             STCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTT--SSEEEEEE-TTSSEEE-EEE---TTTT--
T ss_pred             cccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccC--CCCcEEEEcCCcCEEE-Eec---CCCC--
Confidence            3446788999999988888887766555555555554443222211111  0134689999999887 454   3444  


Q ss_pred             CcCcccEEEEEEcC--CCCcccCCCcccccCCC--eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          326 PVDSWDHLTFIDLD--DQAGIKDKVPVPLTRGR--FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       326 ~~~~~~~l~~~d~~--~~~~~~~~~~~~lt~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                            .|.++++.  +++.........+..+.  ......+..+|||++||+.....    ..|..++++..+++.+.+
T Consensus       215 ------~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~----~sI~vf~~d~~~g~l~~~  284 (345)
T PF10282_consen  215 ------TVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGS----NSISVFDLDPATGTLTLV  284 (345)
T ss_dssp             ------EEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTT----TEEEEEEECTTTTTEEEE
T ss_pred             ------cEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccC----CEEEEEEEecCCCceEEE
Confidence                  56666665  33200000000111110  00123378899999887765442    244444443222555544


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                      ... .   .+...-..+.++|||++++......+.=.++.+|.+++.+...
T Consensus       285 ~~~-~---~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~  331 (345)
T PF10282_consen  285 QTV-P---TGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPV  331 (345)
T ss_dssp             EEE-E---ESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred             EEE-e---CCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEe
Confidence            331 0   0222346688999999998876555544455556667766543

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3

Probab=98.99  E-value=1.2e-08  Score=98.19  Aligned_cols=115  Identities=19%  Similarity=0.204  Sum_probs=80.9

Q ss_pred             EEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchh
Q psy463          486 KLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIY  565 (790)
Q Consensus       486 ~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~  565 (790)
                      .++.|.     ..+.||+||++||..-    ...|....... +++.||+|+.+|.........           ..+++
T Consensus         7 ~v~~P~-----~~g~yPVv~f~~G~~~----~~s~Ys~ll~h-vAShGyIVV~~d~~~~~~~~~-----------~~~~~   65 (259)
T PF12740_consen    7 LVYYPS-----SAGTYPVVLFLHGFLL----INSWYSQLLEH-VASHGYIVVAPDLYSIGGPDD-----------TDEVA   65 (259)
T ss_pred             EEEecC-----CCCCcCEEEEeCCcCC----CHHHHHHHHHH-HHhCceEEEEecccccCCCCc-----------chhHH
Confidence            456676     4567999999999873    23332223333 445999999999655332111           14577


Q ss_pred             HHHHHHHHHHHhC----C---CcCCCceEEEEechHHHHHHHHHhcCC----CCceEEEEEeCCCCC
Q psy463          566 DQINVTRYLQENL----P---YIDKTRTAIWGWSYGGYATGLALALDP----SNVFKCGISVAPVTD  621 (790)
Q Consensus       566 D~~~~~~~l~~~~----~---~~d~~ri~i~G~S~GG~~a~~~a~~~p----~~~~~~~v~~~~~~~  621 (790)
                      +..+.++|+.+.+    +   ..|.+|++|+|||.||-++..++..+.    ...+++++++.|+..
T Consensus        66 ~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG  132 (259)
T PF12740_consen   66 SAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG  132 (259)
T ss_pred             HHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence            7788888876532    1   258889999999999999998888652    137999999999863

1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process

>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function

Probab=98.96  E-value=1.7e-08  Score=98.83  Aligned_cols=251  Identities=15%  Similarity=0.143  Sum_probs=85.8

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCC-CCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRN-SALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG-~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      .-+||++-|...+-. .-.|... ....+...||.|+.+..+- ..++|..-..        .+++|+.++++|++...+
T Consensus        33 ~~~llfIGGLtDGl~-tvpY~~~-La~aL~~~~wsl~q~~LsSSy~G~G~~SL~--------~D~~eI~~~v~ylr~~~~  102 (303)
T PF08538_consen   33 PNALLFIGGLTDGLL-TVPYLPD-LAEALEETGWSLFQVQLSSSYSGWGTSSLD--------RDVEEIAQLVEYLRSEKG  102 (303)
T ss_dssp             SSEEEEE--TT--TT--STCHHH-HHHHHT-TT-EEEEE--GGGBTTS-S--HH--------HHHHHHHHHHHHHHHHS-
T ss_pred             CcEEEEECCCCCCCC-CCchHHH-HHHHhccCCeEEEEEEecCccCCcCcchhh--------hHHHHHHHHHHHHHHhhc
Confidence            347888866544321 2222222 2333455799999998874 2334432221        568999999999998432


Q ss_pred             -CcCCCceEEEEechHHHHHHHHHhcCCC----CceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccch
Q psy463          580 -YIDKTRTAIWGWSYGGYATGLALALDPS----NVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK  654 (790)
Q Consensus       580 -~~d~~ri~i~G~S~GG~~a~~~a~~~p~----~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  654 (790)
                       ....++|+|+|||-|..-++.++.+...    ..+.++|+.+||+|.+........           ...+.+.  ...
T Consensus       103 g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~-----------~~~~~~~--v~~  169 (303)
T PF08538_consen  103 GHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE-----------REAYEEL--VAL  169 (303)
T ss_dssp             -----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH--------------HHHH--HHH
T ss_pred             cccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc-----------hHHHHHH--HHH
Confidence             1357899999999999999998887643    579999999999997653222111           0001100  011


Q ss_pred             hhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh----hhhhhhhhhccCCccEEE
Q psy463          655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK----IAALNNKVDRIRDKQYLL  730 (790)
Q Consensus       655 ~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~P~Li  730 (790)
                      ++.+      +-.|..|...|........-     +.+....++.....-......|.    +..+...+.++ ..|+|+
T Consensus       170 A~~~------i~~g~~~~~lp~~~~~~~~~-----~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v-~~plLv  237 (303)
T PF08538_consen  170 AKEL------IAEGKGDEILPREFTPLVFY-----DTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKV-SKPLLV  237 (303)
T ss_dssp             HHHH------HHCT-TT-GG----GGTTT------SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG---S-EEE
T ss_pred             HHHH------HHcCCCCceeeccccccccC-----CCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccC-CCceEE
Confidence            1111      00112222111111000000     00000001111100000111111    11223456678 889999


Q ss_pred             EecCCCcccchh-hhHHHHHHHHhcCC----ceEEEEcCCCCCcCCC-c----chHHHHHHHHHHH
Q psy463          731 VHGTMDDNVHFQ-QSMMLAKSLQHADI----MFQSQTYPDEEHGLIG-V----RPHFYHTLERFLD  786 (790)
Q Consensus       731 i~G~~D~~v~~~-~~~~l~~~l~~~g~----~~~~~~~p~~~H~~~~-~----~~~~~~~i~~fl~  786 (790)
                      +.+++|+.||.. .-+.+.+.++.+-.    .....++||++|.+.. .    .+.+.+.+..||+
T Consensus       238 l~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~  303 (303)
T PF08538_consen  238 LYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK  303 (303)
T ss_dssp             EEE--TT-----------------------------------------------------------
T ss_pred             EecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence            999999999864 33456666665432    2235589999999986 2    2356777787774

This family contains many hypothetical proteins. ; PDB: 2Q0X_B.

>KOG1407|consensus

Probab=98.92  E-value=1e-06  Score=81.74  Aligned_cols=274  Identities=16%  Similarity=0.215  Sum_probs=149.3

Q ss_pred             ecCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEE
Q psy463            7 LSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARIT   86 (790)
Q Consensus         7 ~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~   86 (790)
                      +++..+++|.-||++||-.+. +..+.+|.+...  .    .......+.+.......-|.+...-++.+..  ....+.
T Consensus        20 ~~~v~Sv~wn~~g~~lasgs~-dktv~v~n~e~~--r----~~~~~~~~gh~~svdql~w~~~~~d~~atas--~dk~ir   90 (313)
T KOG1407|consen   20 VQKVHSVAWNCDGTKLASGSF-DKTVSVWNLERD--R----FRKELVYRGHTDSVDQLCWDPKHPDLFATAS--GDKTIR   90 (313)
T ss_pred             hhcceEEEEcccCceeeeccc-CCceEEEEecch--h----hhhhhcccCCCcchhhheeCCCCCcceEEec--CCceEE
Confidence            566778999999999998776 445556655442  1    0000011111111223446543333322222  234566


Q ss_pred             EeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccc
Q psy463           87 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR  166 (790)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~  166 (790)
                      +++..+++|............      -.|||||+++++....+             .|..+|..+.++      ..--.
T Consensus        91 ~wd~r~~k~~~~i~~~~eni~------i~wsp~g~~~~~~~kdD-------------~it~id~r~~~~------~~~~~  145 (313)
T KOG1407|consen   91 IWDIRSGKCTARIETKGENIN------ITWSPDGEYIAVGNKDD-------------RITFIDARTYKI------VNEEQ  145 (313)
T ss_pred             EEEeccCcEEEEeeccCcceE------EEEcCCCCEEEEecCcc-------------cEEEEEecccce------eehhc
Confidence            788888888765554332222      38999999999866322             577777544321      11112


Q ss_pred             cceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCC
Q psy463          167 GRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVE  246 (790)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~  246 (790)
                      ..+++.++..+ -.++  ++|...-     .      +-+-++....-++     ...|+                 ..+
T Consensus       146 ~~~e~ne~~w~-~~nd--~Fflt~G-----l------G~v~ILsypsLkp-----v~si~-----------------AH~  189 (313)
T KOG1407|consen  146 FKFEVNEISWN-NSND--LFFLTNG-----L------GCVEILSYPSLKP-----VQSIK-----------------AHP  189 (313)
T ss_pred             ccceeeeeeec-CCCC--EEEEecC-----C------ceEEEEecccccc-----ccccc-----------------cCC
Confidence            24556666444 3332  6666531     1      2333333322221     12233                 334


Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      ..---+.++||||+++.-.-+   ..+-+.|++.--|.+.+..-   .|  +....+||.||+.|+ .++    .+-   
T Consensus       190 snCicI~f~p~GryfA~GsAD---AlvSLWD~~ELiC~R~isRl---dw--pVRTlSFS~dg~~lA-SaS----EDh---  253 (313)
T KOG1407|consen  190 SNCICIEFDPDGRYFATGSAD---ALVSLWDVDELICERCISRL---DW--PVRTLSFSHDGRMLA-SAS----EDH---  253 (313)
T ss_pred             cceEEEEECCCCceEeecccc---ceeeccChhHhhhheeeccc---cC--ceEEEEeccCcceee-ccC----ccc---
Confidence            455678999999966654322   23667777766665554431   22  367899999999998 666    222   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                         +  |=+.++++|.     +...+.... . ...++|.|....|+|...+
T Consensus       254 ---~--IDIA~vetGd-----~~~eI~~~~-~-t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  254 ---F--IDIAEVETGD-----RVWEIPCEG-P-TFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             ---e--EEeEecccCC-----eEEEeeccC-C-ceeEEecCCCceeeEEecC
Confidence               2  3344555665     132332211 1 1237899999999999877

>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae

Probab=98.92  E-value=2.8e-09  Score=107.14  Aligned_cols=136  Identities=21%  Similarity=0.258  Sum_probs=81.0

Q ss_pred             CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcC---CeEEEEEcCCCCCCChhhhH---
Q psy463          480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNK---DIVVAYIDGRNSALKGNTLK---  552 (790)
Q Consensus       480 g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~---G~~v~~~d~rG~~~~g~~~~---  552 (790)
                      |.....++++|+++.  ..+++|+|+++||....   ...+.. .....+..+.   -.++++++..+.......+.   
T Consensus         5 g~~~~~~VylP~~y~--~~~~~PvlylldG~~~~---~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~   79 (251)
T PF00756_consen    5 GRDRRVWVYLPPGYD--PSKPYPVLYLLDGQSGW---FRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPA   79 (251)
T ss_dssp             TEEEEEEEEECTTGG--TTTTEEEEEEESHTTHH---HHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSB
T ss_pred             CCeEEEEEEECCCCC--CCCCCEEEEEccCCccc---cccchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccc
Confidence            567888999999986  78999999999995111   111111 1222233321   24556666544331100000   


Q ss_pred             ---hhhhccCCccchhHHH--HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463          553 ---YAGYRRLGTVEIYDQI--NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW  622 (790)
Q Consensus       553 ---~~~~~~~~~~~~~D~~--~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~  622 (790)
                         .......+...+.+.+  +.+.++.++++ ++..+.+|+|+||||+.|+.++.++|+ .|.++++.+|..+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~-~~~~~~~i~G~S~GG~~Al~~~l~~Pd-~F~~~~~~S~~~~~  152 (251)
T PF00756_consen   80 GSSRRADDSGGGDAYETFLTEELIPYIEANYR-TDPDRRAIAGHSMGGYGALYLALRHPD-LFGAVIAFSGALDP  152 (251)
T ss_dssp             CTTCBCTSTTTHHHHHHHHHTHHHHHHHHHSS-EEECCEEEEEETHHHHHHHHHHHHSTT-TESEEEEESEESET
T ss_pred             ccccccccCCCCcccceehhccchhHHHHhcc-cccceeEEeccCCCcHHHHHHHHhCcc-ccccccccCccccc
Confidence               0000011111222222  34556666555 555559999999999999999999996 99999999987553

; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....

>KOG2624|consensus

Probab=98.91  E-value=3e-08  Score=102.51  Aligned_cols=300  Identities=14%  Similarity=0.101  Sum_probs=172.8

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc----chHHHHHhcCCeEEEEEcCCCC
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV----DWNLYLADNKDIVVAYIDGRNS  544 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~----~~~~~~~~~~G~~v~~~d~rG~  544 (790)
                      +.|...+++.||. +-...-.|..     ..++|+|++.||...+   ...|-.    .-...+++++||.|..-|.||.
T Consensus        47 ~~E~h~V~T~DgY-iL~lhRIp~~-----~~~rp~Vll~HGLl~s---S~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn  117 (403)
T KOG2624|consen   47 PVEEHEVTTEDGY-ILTLHRIPRG-----KKKRPVVLLQHGLLAS---SSSWVLNGPEQSLAFLLADAGYDVWLGNNRGN  117 (403)
T ss_pred             ceEEEEEEccCCe-EEEEeeecCC-----CCCCCcEEEeeccccc---cccceecCccccHHHHHHHcCCceeeecCcCc
Confidence            4677888888998 4445555653     3678999999998766   333432    2345678889999999999995


Q ss_pred             CCChhhhHhhh------h--ccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEE
Q psy463          545 ALKGNTLKYAG------Y--RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGI  614 (790)
Q Consensus       545 ~~~g~~~~~~~------~--~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v  614 (790)
                      .. ++......      +  -+|.....+|+.+.++++.+.   ...+++..+|||.|+.....++...|.  +.++..+
T Consensus       118 ~y-Sr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~---T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~  193 (403)
T KOG2624|consen  118 TY-SRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK---TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFI  193 (403)
T ss_pred             cc-chhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh---ccccceEEEEEEccchhheehhcccchhhhhhheee
Confidence            43 33211111      1  123334578999999999883   456899999999999999988887753  4688999


Q ss_pred             EeCCCCCccc---ccccc----------hhhhcCCCCccCchhh---h-hhccc-cchh----------------hhccC
Q psy463          615 SVAPVTDWIY---YDTIY----------SERYMGLPTFEDNLEG---Y-KIAAL-NNKV----------------DRIRD  660 (790)
Q Consensus       615 ~~~~~~~~~~---~~~~~----------~~~~~g~~~~~~~~~~---~-~~~~~-~~~~----------------~~~~~  660 (790)
                      +.+|+.....   .....          ...++|...+......   + ..... ....                .++..
T Consensus       194 aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~  273 (403)
T KOG2624|consen  194 ALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNT  273 (403)
T ss_pred             eecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhh
Confidence            9999874431   10000          0011111100000000   0 00000 0000                00000


Q ss_pred             CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccc
Q psy463          661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH  740 (790)
Q Consensus       661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~  740 (790)
                      ....+..+....-+...+...+.+......  +....|..   .....++-+...|...+.++ ++|+.+.+|..|..+.
T Consensus       274 ~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~--f~~yD~G~---~~N~~~Y~q~~pP~Y~l~~i-~~P~~l~~g~~D~l~~  347 (403)
T KOG2624|consen  274 TLLPVYLAHLPAGTSVKNIVHWAQIVRSGK--FRKYDYGS---KRNLKHYGQSTPPEYDLTNI-KVPTALYYGDNDWLAD  347 (403)
T ss_pred             cccchhhccCCCCccHHHHHHHHHHhcCCC--ccccCCCc---cccHhhcCCCCCCCCCcccc-ccCEEEEecCCcccCC
Confidence            000011111111122222222222222211  11111110   01111222344567888999 9999999999999999


Q ss_pred             hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHHHHh
Q psy463          741 FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFLDSC  788 (790)
Q Consensus       741 ~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl~~~  788 (790)
                      ++....+...+..... ...+-+++-+|.-..    .++.++..|++.+++.
T Consensus       348 ~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~  398 (403)
T KOG2624|consen  348 PEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF  398 (403)
T ss_pred             HHHHHHHHHhcccccc-cccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence            9999988888887654 333337888886443    6889999999988754

>KOG0318|consensus

Probab=98.90  E-value=6.1e-06  Score=84.20  Aligned_cols=112  Identities=12%  Similarity=0.185  Sum_probs=62.2

Q ss_pred             ceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCC
Q psy463          301 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS  380 (790)
Q Consensus       301 ~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~  380 (790)
                      ..+.+||++.++ +..    .+|        .|+++.+.+++..+   ...+......+.. +++|||+++|+.....  
T Consensus       448 ~vAv~~~~~~va-VGG----~Dg--------kvhvysl~g~~l~e---e~~~~~h~a~iT~-vaySpd~~yla~~Da~--  508 (603)
T KOG0318|consen  448 AVAVSPDGSEVA-VGG----QDG--------KVHVYSLSGDELKE---EAKLLEHRAAITD-VAYSPDGAYLAAGDAS--  508 (603)
T ss_pred             eEEEcCCCCEEE-Eec----ccc--------eEEEEEecCCcccc---eeeeecccCCceE-EEECCCCcEEEEeccC--
Confidence            456677777665 343    455        46666666644111   2234444444444 7899999966554333  


Q ss_pred             CceEEEEEEEcCCCCCCc--ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          381 PIVQHMYRINIADPTATP--ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       381 ~~~~~l~~~~~~~~~~~~--~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                         +.+..++..+  .+.  .....       +...+..++|||+.+.++-..-   --.|++++++.
T Consensus       509 ---rkvv~yd~~s--~~~~~~~w~F-------HtakI~~~aWsP~n~~vATGSl---Dt~Viiysv~k  561 (603)
T KOG0318|consen  509 ---RKVVLYDVAS--REVKTNRWAF-------HTAKINCVAWSPNNKLVATGSL---DTNVIIYSVKK  561 (603)
T ss_pred             ---CcEEEEEccc--Cceecceeee-------eeeeEEEEEeCCCceEEEeccc---cceEEEEEccC
Confidence               5666666655  332  11111       2345667899999987654322   23466666543

>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A

Probab=98.88  E-value=3e-08  Score=103.77  Aligned_cols=115  Identities=29%  Similarity=0.274  Sum_probs=60.6

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCC-CCC---C--hhhhHhhh-------------hcc
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRN-SAL---K--GNTLKYAG-------------YRR  558 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG-~~~---~--g~~~~~~~-------------~~~  558 (790)
                      ..++|+|||.||..+...   .++ .++..+++ +||+|++++.|. ++.   .  ...-....             ...
T Consensus        97 ~~~~PvvIFSHGlgg~R~---~yS-~~~~eLAS-~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (379)
T PF03403_consen   97 PGKFPVVIFSHGLGGSRT---SYS-AICGELAS-HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD  171 (379)
T ss_dssp             SS-EEEEEEE--TT--TT---TTH-HHHHHHHH-TT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred             CCCCCEEEEeCCCCcchh---hHH-HHHHHHHh-CCeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccc
Confidence            367999999999988743   333 24455555 899999999994 322   1  11100000             000


Q ss_pred             C------------CccchhHHHHHHHHHHHh-------------------CCCcCCCceEEEEechHHHHHHHHHhcCCC
Q psy463          559 L------------GTVEIYDQINVTRYLQEN-------------------LPYIDKTRTAIWGWSYGGYATGLALALDPS  607 (790)
Q Consensus       559 ~------------~~~~~~D~~~~~~~l~~~-------------------~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~  607 (790)
                      .            ....+.|+..+++.|..-                   .+.+|.++|+++|||+||..++.++...  
T Consensus       172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d--  249 (379)
T PF03403_consen  172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD--  249 (379)
T ss_dssp             --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc--
Confidence            0            001244555555555320                   1346778999999999999999988876  


Q ss_pred             CceEEEEEeCCC
Q psy463          608 NVFKCGISVAPV  619 (790)
Q Consensus       608 ~~~~~~v~~~~~  619 (790)
                      .+++++|+..|+
T Consensus       250 ~r~~~~I~LD~W  261 (379)
T PF03403_consen  250 TRFKAGILLDPW  261 (379)
T ss_dssp             TT--EEEEES--
T ss_pred             cCcceEEEeCCc
Confidence            489999998885

>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO

Probab=98.88  E-value=4.9e-08  Score=90.72  Aligned_cols=53  Identities=13%  Similarity=0.274  Sum_probs=41.0

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHH
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFL  785 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl  785 (790)
                      ..++++++++.|++++.+.+...+..       +..++.+|.+|.+.. -++.+..|.+|+
T Consensus       134 ~~~~lvll~~~DEvLd~~~a~~~~~~-------~~~~i~~ggdH~f~~-f~~~l~~i~~f~  186 (187)
T PF05728_consen  134 PERYLVLLQTGDEVLDYREAVAKYRG-------CAQIIEEGGDHSFQD-FEEYLPQIIAFL  186 (187)
T ss_pred             CccEEEEEecCCcccCHHHHHHHhcC-------ceEEEEeCCCCCCcc-HHHHHHHHHHhh
Confidence            57999999999999999776665542       244566788999984 667778888886

One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.

>COG4757 Predicted alpha/beta hydrolase [General function prediction only]

Probab=98.88  E-value=2.1e-08  Score=91.54  Aligned_cols=262  Identities=14%  Similarity=0.074  Sum_probs=140.2

Q ss_pred             EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH
Q psy463          473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK  552 (790)
Q Consensus       473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~  552 (790)
                      ..+...||..+.+..+-..+       +.+-.+++-|+.+.   ...|. .-...+++++||.|+..||||.+++.-.-.
T Consensus         8 ~~l~~~DG~~l~~~~~pA~~-------~~~g~~~va~a~Gv---~~~fY-RrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~   76 (281)
T COG4757           8 AHLPAPDGYSLPGQRFPADG-------KASGRLVVAGATGV---GQYFY-RRFAAAAAKAGFEVLTFDYRGIGQSRPASL   76 (281)
T ss_pred             cccccCCCccCccccccCCC-------CCCCcEEecccCCc---chhHh-HHHHHHhhccCceEEEEecccccCCCcccc
Confidence            45667799999988874332       12223444555554   11222 222345667999999999999887654433


Q ss_pred             hhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC--CCCcccccccch
Q psy463          553 YAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP--VTDWIYYDTIYS  630 (790)
Q Consensus       553 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~--~~~~~~~~~~~~  630 (790)
                      ....-.+......|+.++++++.+..+   ......+|||+||.+...+.. ++ ..-.+.+.+++  +..+......+.
T Consensus        77 ~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m~~~~~l~  151 (281)
T COG4757          77 SGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWMGLRERLG  151 (281)
T ss_pred             ccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccccc-Cc-ccceeeEeccccccccchhhhhccc
Confidence            322233444567889999999987444   457899999999988776655 33 12223332222  222211100000


Q ss_pred             hhhc---CCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc
Q psy463          631 ERYM---GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN  707 (790)
Q Consensus       631 ~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  707 (790)
                      ...+   ..|     +..+.       ...+  ..-  +-|..+ +.|-..-.+..+..+....      |...|.    
T Consensus       152 ~~~l~~lv~p-----~lt~w-------~g~~--p~~--l~G~G~-d~p~~v~RdW~RwcR~p~y------~fddp~----  204 (281)
T COG4757         152 AVLLWNLVGP-----PLTFW-------KGYM--PKD--LLGLGS-DLPGTVMRDWARWCRHPRY------YFDDPA----  204 (281)
T ss_pred             ceeecccccc-----chhhc-------cccC--cHh--hcCCCc-cCcchHHHHHHHHhcCccc------cccChh----
Confidence            0000   000     00000       0000  000  012221 1121111222221111100      111110    


Q ss_pred             chhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCC----CCCcCCC-cc-hHHHHHH
Q psy463          708 LEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPD----EEHGLIG-VR-PHFYHTL  781 (790)
Q Consensus       708 ~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~----~~H~~~~-~~-~~~~~~i  781 (790)
                           .....+..+.+ .+|++.+-...|+-+|+.....+.+...++.  .+...++.    .||+-.. ++ +.+.+.+
T Consensus       205 -----~~~~~q~yaaV-rtPi~~~~~~DD~w~P~As~d~f~~~y~nAp--l~~~~~~~~~~~lGH~gyfR~~~Ealwk~~  276 (281)
T COG4757         205 -----MRNYRQVYAAV-RTPITFSRALDDPWAPPASRDAFASFYRNAP--LEMRDLPRAEGPLGHMGYFREPFEALWKEM  276 (281)
T ss_pred             -----HhHHHHHHHHh-cCceeeeccCCCCcCCHHHHHHHHHhhhcCc--ccceecCcccCcccchhhhccchHHHHHHH
Confidence                 11112456777 9999999999999999999999999888774  46666654    3786554 33 7788888


Q ss_pred             HHHH
Q psy463          782 ERFL  785 (790)
Q Consensus       782 ~~fl  785 (790)
                      ++|+
T Consensus       277 L~w~  280 (281)
T COG4757         277 LGWF  280 (281)
T ss_pred             HHhh
Confidence            8886

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=98.87  E-value=2.9e-07  Score=87.24  Aligned_cols=166  Identities=9%  Similarity=0.164  Sum_probs=102.6

Q ss_pred             EEEEEEccCCc-EEEEEecc--C------cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463          249 LSRVNWANESV-VAAWVNRV--Q------NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ  319 (790)
Q Consensus       249 ~~~~~wspDg~-~~~~~~r~--~------~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~  319 (790)
                      ...+.|+|+|+ ++..+.+.  .      +...||.++..+.....+.-...     +....++|||+|+.|+++..   
T Consensus         8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~-----~~I~~~~WsP~g~~favi~g---   79 (194)
T PF08662_consen    8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKE-----GPIHDVAWSPNGNEFAVIYG---   79 (194)
T ss_pred             eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCC-----CceEEEEECcCCCEEEEEEc---
Confidence            35788999999 44444421  1      12568888877666555533221     12458999999999986554   


Q ss_pred             ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463          320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE  399 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~  399 (790)
                      ..+        ..+.++|+++..      ...+....  . ..+.|||+|+.|++.+..+..  ..|...+...    .+
T Consensus        80 ~~~--------~~v~lyd~~~~~------i~~~~~~~--~-n~i~wsP~G~~l~~~g~~n~~--G~l~~wd~~~----~~  136 (194)
T PF08662_consen   80 SMP--------AKVTLYDVKGKK------IFSFGTQP--R-NTISWSPDGRFLVLAGFGNLN--GDLEFWDVRK----KK  136 (194)
T ss_pred             cCC--------cccEEEcCcccE------eEeecCCC--c-eEEEECCCCCEEEEEEccCCC--cEEEEEECCC----CE
Confidence            122        257777776443      34443322  2 237899999998887755322  4555666543    23


Q ss_pred             eeeecccccCCCcccEEEEEEecCCcEEEEEeecCC---CCeEEEEecCCCeEEE
Q psy463          400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG---IPEIMLFDKTGQRLLY  451 (790)
Q Consensus       400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~---~~~i~~~~~~~~~~~~  451 (790)
                      ++...      .......+.|||||++++.....+.   -..+.+++..|+.+..
T Consensus       137 ~i~~~------~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~~l~~  185 (194)
T PF08662_consen  137 KISTF------EHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGRLLYK  185 (194)
T ss_pred             Eeecc------ccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCeEeEe
Confidence            33321      2334677899999999998766543   4557777777665543

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=98.86  E-value=2.9e-06  Score=86.56  Aligned_cols=221  Identities=16%  Similarity=0.187  Sum_probs=125.2

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      .|+|+++.|+.... +            +.|.++++.+++     ....+......+.. ..|++++.  +++...    
T Consensus        58 ~~~~~~~~l~~~~~-~------------~~i~i~~~~~~~-----~~~~~~~~~~~i~~-~~~~~~~~--~~~~~~----  112 (289)
T cd00200          58 AASADGTYLASGSS-D------------KTIRLWDLETGE-----CVRTLTGHTSYVSS-VAFSPDGR--ILSSSS----  112 (289)
T ss_pred             EECCCCCEEEEEcC-C------------CeEEEEEcCccc-----ceEEEeccCCcEEE-EEEcCCCC--EEEEec----
Confidence            67888877665442 1            278888887652     22333322222222 34555422  333332    


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT  274 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~  274 (790)
                             ....|.++++.+++.     ...+.                 .....+..+.|+|++++++....+.   .+.
T Consensus       113 -------~~~~i~~~~~~~~~~-----~~~~~-----------------~~~~~i~~~~~~~~~~~l~~~~~~~---~i~  160 (289)
T cd00200         113 -------RDKTIKVWDVETGKC-----LTTLR-----------------GHTDWVNSVAFSPDGTFVASSSQDG---TIK  160 (289)
T ss_pred             -------CCCeEEEEECCCcEE-----EEEec-----------------cCCCcEEEEEEcCcCCEEEEEcCCC---cEE
Confidence                   125788888875442     11111                 2344578899999988666554221   388


Q ss_pred             EEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC
Q psy463          275 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR  354 (790)
Q Consensus       275 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~  354 (790)
                      ++++.+++.........     .......|+|+|+.++ +.+    .+|        .|.++|+..++     ....+..
T Consensus       161 i~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~-~~~----~~~--------~i~i~d~~~~~-----~~~~~~~  217 (289)
T cd00200         161 LWDLRTGKCVATLTGHT-----GEVNSVAFSPDGEKLL-SSS----SDG--------TIKLWDLSTGK-----CLGTLRG  217 (289)
T ss_pred             EEEccccccceeEecCc-----cccceEEECCCcCEEE-Eec----CCC--------cEEEEECCCCc-----eecchhh
Confidence            88988776554443221     1245789999998887 444    245        68888987665     1333423


Q ss_pred             CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          355 GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       355 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      ....+.. +.|++++..+ +.+...    ..|+.+++..  ++. ..+..       ....+..+.|++++++++..
T Consensus       218 ~~~~i~~-~~~~~~~~~~-~~~~~~----~~i~i~~~~~--~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~  279 (289)
T cd00200         218 HENGVNS-VAFSPDGYLL-ASGSED----GTIRVWDLRT--GECVQTLSG-------HTNSVTSLAWSPDGKRLASG  279 (289)
T ss_pred             cCCceEE-EEEcCCCcEE-EEEcCC----CcEEEEEcCC--ceeEEEccc-------cCCcEEEEEECCCCCEEEEe
Confidence            3333444 7899996544 444321    3566666654  222 22221       34467789999998877654

>KOG3101|consensus

Probab=98.85  E-value=2.3e-08  Score=89.55  Aligned_cols=135  Identities=23%  Similarity=0.314  Sum_probs=86.2

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEc--CCCCCCChhh----hHh
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYID--GRNSALKGNT----LKY  553 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d--~rG~~~~g~~----~~~  553 (790)
                      ..+..-+|+|+.+.  .+++.|+|+++-|....   .+.+.. ...++.+++.|++|+.||  .||...-|.+    |..
T Consensus        26 c~Mtf~vylPp~a~--~~k~~P~lf~LSGLTCT---~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~  100 (283)
T KOG3101|consen   26 CSMTFGVYLPPDAP--RGKRCPVLFYLSGLTCT---HENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQ  100 (283)
T ss_pred             cceEEEEecCCCcc--cCCcCceEEEecCCccc---chhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccC
Confidence            34556688898876  67779999999998776   223321 234566677999999999  4564322211    111


Q ss_pred             -------hhhccCCc-cchhHHHHHHHHHHH----hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          554 -------AGYRRLGT-VEIYDQINVTRYLQE----NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       554 -------~~~~~~~~-~~~~D~~~~~~~l~~----~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                             +....|.. +.++|.  .++.|.+    ..--+|..|++|+||||||.-|+..+.+.|. +++.+-+.+|+.+
T Consensus       101 GAGFYvnAt~epw~~~yrMYdY--v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~-kykSvSAFAPI~N  177 (283)
T KOG3101|consen  101 GAGFYVNATQEPWAKHYRMYDY--VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPS-KYKSVSAFAPICN  177 (283)
T ss_pred             CceeEEecccchHhhhhhHHHH--HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcc-cccceeccccccC
Confidence                   00011111 122222  1222211    1123788899999999999999999988886 8999999999987


Q ss_pred             cc
Q psy463          622 WI  623 (790)
Q Consensus       622 ~~  623 (790)
                      ..
T Consensus       178 P~  179 (283)
T KOG3101|consen  178 PI  179 (283)
T ss_pred             cc
Confidence            54

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.84  E-value=2.2e-06  Score=93.14  Aligned_cols=276  Identities=12%  Similarity=0.142  Sum_probs=155.3

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...+||||++++|..+..+..        +.+|+++|+++++.    +...+.   ..-.....|.+++.. ++|.+...
T Consensus       128 ~~~~Spdg~~la~~~s~~G~e--------~~~l~v~Dl~tg~~----l~d~i~---~~~~~~~~W~~d~~~-~~y~~~~~  191 (414)
T PF02897_consen  128 GFSVSPDGKRLAYSLSDGGSE--------WYTLRVFDLETGKF----LPDGIE---NPKFSSVSWSDDGKG-FFYTRFDE  191 (414)
T ss_dssp             EEEETTTSSEEEEEEEETTSS--------EEEEEEEETTTTEE----EEEEEE---EEESEEEEECTTSSE-EEEEECST
T ss_pred             eeeECCCCCEEEEEecCCCCc--------eEEEEEEECCCCcC----cCCccc---ccccceEEEeCCCCE-EEEEEeCc
Confidence            347899999999987655432        45899999988841    111111   111112678776553 56665433


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE-eccCcce
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV-NRVQNRA  271 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~-~r~~~~~  271 (790)
                      ...+. --.....||+..+.++....    ..+            +.+.  ........+.+|+||++++.. .+.....
T Consensus       192 ~~~~~-~~~~~~~v~~~~~gt~~~~d----~lv------------fe~~--~~~~~~~~~~~s~d~~~l~i~~~~~~~~s  252 (414)
T PF02897_consen  192 DQRTS-DSGYPRQVYRHKLGTPQSED----ELV------------FEEP--DEPFWFVSVSRSKDGRYLFISSSSGTSES  252 (414)
T ss_dssp             TTSS--CCGCCEEEEEEETTS-GGG-----EEE------------EC-T--TCTTSEEEEEE-TTSSEEEEEEESSSSEE
T ss_pred             ccccc-cCCCCcEEEEEECCCChHhC----eeE------------Eeec--CCCcEEEEEEecCcccEEEEEEEccccCC
Confidence            22110 00224689999988764310    111            1111  222236678999999955544 4433347


Q ss_pred             EEEEEECCCC-----ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccC
Q psy463          272 RITRCSINEG-----TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD  346 (790)
Q Consensus       272 ~i~~~~~~~g-----~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~  346 (790)
                      .+|++++..+     ..+.+..... .     . .......|..+++...    .+..     ...|+.++++.....  
T Consensus       253 ~v~~~d~~~~~~~~~~~~~l~~~~~-~-----~-~~~v~~~~~~~yi~Tn----~~a~-----~~~l~~~~l~~~~~~--  314 (414)
T PF02897_consen  253 EVYLLDLDDGGSPDAKPKLLSPRED-G-----V-EYYVDHHGDRLYILTN----DDAP-----NGRLVAVDLADPSPA--  314 (414)
T ss_dssp             EEEEEECCCTTTSS-SEEEEEESSS-S-------EEEEEEETTEEEEEE-----TT-T-----T-EEEEEETTSTSGG--
T ss_pred             eEEEEeccccCCCcCCcEEEeCCCC-c-----e-EEEEEccCCEEEEeeC----CCCC-----CcEEEEecccccccc--
Confidence            8999999875     4555554321 1     1 1112222666775554    2221     458999998765400  


Q ss_pred             CCcc-cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC-CCCCCcceeeecccccCCCcccEEEEEEecCC
Q psy463          347 KVPV-PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA-DPTATPECITCDLLTSANQKCSYSGATFSTNV  424 (790)
Q Consensus       347 ~~~~-~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg  424 (790)
                       ... .|......+. +-.++..++.|++....+.  ..+|.++++. +  .....+...      ..+.+...+..+++
T Consensus       315 -~~~~~l~~~~~~~~-l~~~~~~~~~Lvl~~~~~~--~~~l~v~~~~~~--~~~~~~~~p------~~g~v~~~~~~~~~  382 (414)
T PF02897_consen  315 -EWWTVLIPEDEDVS-LEDVSLFKDYLVLSYRENG--SSRLRVYDLDDG--KESREIPLP------EAGSVSGVSGDFDS  382 (414)
T ss_dssp             -GEEEEEE--SSSEE-EEEEEEETTEEEEEEEETT--EEEEEEEETT-T--EEEEEEESS------SSSEEEEEES-TT-
T ss_pred             -cceeEEcCCCCcee-EEEEEEECCEEEEEEEECC--ccEEEEEECCCC--cEEeeecCC------cceEEeccCCCCCC
Confidence             011 2333222111 1345556777887776632  3789999998 4  333333321      33455666777889


Q ss_pred             cEEEEEeecCC-CCeEEEEecCCCeEEEec
Q psy463          425 SYYVLSCIGPG-IPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       425 ~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~  453 (790)
                      ..+.+++++.. |+.+|.+|+++++.+.+.
T Consensus       383 ~~~~~~~ss~~~P~~~y~~d~~t~~~~~~k  412 (414)
T PF02897_consen  383 DELRFSYSSFTTPPTVYRYDLATGELTLLK  412 (414)
T ss_dssp             SEEEEEEEETTEEEEEEEEETTTTCEEEEE
T ss_pred             CEEEEEEeCCCCCCEEEEEECCCCCEEEEE
Confidence            99999999998 999999999998777653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold

Probab=98.83  E-value=3.9e-07  Score=87.13  Aligned_cols=104  Identities=14%  Similarity=0.098  Sum_probs=72.1

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ....+||-+||.||+-   ..  +.+....+.+.|++++.+|++|.+........       ...-.+-...++.+.+++
T Consensus        33 s~~gTVv~~hGsPGSH---~D--FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~-------~~~n~er~~~~~~ll~~l  100 (297)
T PF06342_consen   33 SPLGTVVAFHGSPGSH---ND--FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQ-------QYTNEERQNFVNALLDEL  100 (297)
T ss_pred             CCceeEEEecCCCCCc---cc--hhhhhhHHHHcCeEEEEeCCCCCCCCCCCccc-------ccChHHHHHHHHHHHHHc
Confidence            4456899999999983   33  44666777789999999999997653322110       122334445566666645


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      + ++ .++..+|||.|+-.|+.++..+|   ..++++++|+
T Consensus       101 ~-i~-~~~i~~gHSrGcenal~la~~~~---~~g~~lin~~  136 (297)
T PF06342_consen  101 G-IK-GKLIFLGHSRGCENALQLAVTHP---LHGLVLINPP  136 (297)
T ss_pred             C-CC-CceEEEEeccchHHHHHHHhcCc---cceEEEecCC
Confidence            4 54 78999999999999999999875   3455655554

>KOG2096|consensus

Probab=98.81  E-value=1.4e-06  Score=83.09  Aligned_cols=150  Identities=13%  Similarity=0.038  Sum_probs=82.7

Q ss_pred             CEEEEEEEccCCcEEEEEeccCc---ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQN---RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~---~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ......+.|||||+++...-..+   ..-||.-|-.=.+..++++-.+..   .....++|||+..+++ +++    ++|
T Consensus       229 ~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~---saV~~~aFsn~S~r~v-tvS----kDG  300 (420)
T KOG2096|consen  229 SSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQ---SAVLAAAFSNSSTRAV-TVS----KDG  300 (420)
T ss_pred             ccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccch---hheeeeeeCCCcceeE-EEe----cCC
Confidence            34457889999996665433222   112333222112334444433211   1245789999999998 787    788


Q ss_pred             CCCcCcccEEEEEEcC--CCCcccCCCcccccCCC--------eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          324 STPVDSWDHLTFIDLD--DQAGIKDKVPVPLTRGR--------FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~--~~~~~~~~~~~~lt~~~--------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                            ...||-.|+.  .++     .++.|-.+.        -.+  -++.+|.|+.++.....      .|..+..+.
T Consensus       301 ------~wriwdtdVrY~~~q-----Dpk~Lk~g~~pl~aag~~p~--RL~lsP~g~~lA~s~gs------~l~~~~se~  361 (420)
T KOG2096|consen  301 ------KWRIWDTDVRYEAGQ-----DPKILKEGSAPLHAAGSEPV--RLELSPSGDSLAVSFGS------DLKVFASED  361 (420)
T ss_pred             ------cEEEeeccceEecCC-----CchHhhcCCcchhhcCCCce--EEEeCCCCcEEEeecCC------ceEEEEccc
Confidence                  5567766653  122     133333221        112  26789999977665432      344444433


Q ss_pred             CCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          394 PTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       394 ~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      + ....++...      ....+.+++|++||++++-.
T Consensus       362 g-~~~~~~e~~------h~~~Is~is~~~~g~~~atc  391 (420)
T KOG2096|consen  362 G-KDYPELEDI------HSTTISSISYSSDGKYIATC  391 (420)
T ss_pred             C-ccchhHHHh------hcCceeeEEecCCCcEEeee
Confidence            1 223333321      34567889999999988543

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=98.78  E-value=4.9e-06  Score=86.12  Aligned_cols=250  Identities=13%  Similarity=0.075  Sum_probs=128.1

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      ...+.|||||+.++.+...++.  ++.+...+++...      .... ........|++++..+.-.....  ..+.+++
T Consensus        33 ~~~l~~~~dg~~l~~~~~~~~~--v~~~d~~~~~~~~------~~~~-~~~~~~~~~~~~g~~l~~~~~~~--~~l~~~d  101 (300)
T TIGR03866        33 PRGITLSKDGKLLYVCASDSDT--IQVIDLATGEVIG------TLPS-GPDPELFALHPNGKILYIANEDD--NLVTVID  101 (300)
T ss_pred             CCceEECCCCCEEEEEECCCCe--EEEEECCCCcEEE------eccC-CCCccEEEECCCCCEEEEEcCCC--CeEEEEE
Confidence            4568899999987655544433  5555554443100      0000 11122345666665442222211  2466677


Q ss_pred             CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463           90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF  169 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~  169 (790)
                      ..++++...+....      ......|+|||+.++.......            .++.++..+++     ....+..+. 
T Consensus       102 ~~~~~~~~~~~~~~------~~~~~~~~~dg~~l~~~~~~~~------------~~~~~d~~~~~-----~~~~~~~~~-  157 (300)
T TIGR03866       102 IETRKVLAEIPVGV------EPEGMAVSPDGKIVVNTSETTN------------MAHFIDTKTYE-----IVDNVLVDQ-  157 (300)
T ss_pred             CCCCeEEeEeeCCC------CcceEEECCCCCEEEEEecCCC------------eEEEEeCCCCe-----EEEEEEcCC-
Confidence            76654433222110      1134589999998887553211            35556765542     111111111 


Q ss_pred             EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEE
Q psy463          170 TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVL  249 (790)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~  249 (790)
                      .. .-..+++++.  .++++..          ....|+++|+++++..     ..++..   ..   ..    .......
T Consensus       158 ~~-~~~~~s~dg~--~l~~~~~----------~~~~v~i~d~~~~~~~-----~~~~~~---~~---~~----~~~~~~~  209 (300)
T TIGR03866       158 RP-RFAEFTADGK--ELWVSSE----------IGGTVSVIDVATRKVI-----KKITFE---IP---GV----HPEAVQP  209 (300)
T ss_pred             Cc-cEEEECCCCC--EEEEEcC----------CCCEEEEEEcCcceee-----eeeeec---cc---cc----ccccCCc
Confidence            11 1245666654  4444321          1157888898876531     111100   00   00    0011112


Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      ..+.|+|||+.++......  ..+.++|.++++.........      ....+.|+|||+.|+ +..   ..+|      
T Consensus       210 ~~i~~s~dg~~~~~~~~~~--~~i~v~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~-~~~---~~~~------  271 (300)
T TIGR03866       210 VGIKLTKDGKTAFVALGPA--NRVAVVDAKTYEVLDYLLVGQ------RVWQLAFTPDEKYLL-TTN---GVSN------  271 (300)
T ss_pred             cceEECCCCCEEEEEcCCC--CeEEEEECCCCcEEEEEEeCC------CcceEEECCCCCEEE-EEc---CCCC------
Confidence            3578999999655443322  248888998887654333211      134789999999887 443   2344      


Q ss_pred             ccEEEEEEcCCCC
Q psy463          330 WDHLTFIDLDDQA  342 (790)
Q Consensus       330 ~~~l~~~d~~~~~  342 (790)
                        .|.++|+.+++
T Consensus       272 --~i~v~d~~~~~  282 (300)
T TIGR03866       272 --DVSVIDVAALK  282 (300)
T ss_pred             --eEEEEECCCCc
Confidence              79999998876

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0293|consensus

Probab=98.78  E-value=4.1e-07  Score=89.63  Aligned_cols=155  Identities=15%  Similarity=0.178  Sum_probs=100.3

Q ss_pred             EEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          248 VLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       248 ~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      .+.-+.||||.+ +++......    +.+.|+.+|.+..++....  +.  ...+-+|-|||..++ +.+    .++   
T Consensus       271 ~V~yi~wSPDdryLlaCg~~e~----~~lwDv~tgd~~~~y~~~~--~~--S~~sc~W~pDg~~~V-~Gs----~dr---  334 (519)
T KOG0293|consen  271 PVSYIMWSPDDRYLLACGFDEV----LSLWDVDTGDLRHLYPSGL--GF--SVSSCAWCPDGFRFV-TGS----PDR---  334 (519)
T ss_pred             ceEEEEECCCCCeEEecCchHh----eeeccCCcchhhhhcccCc--CC--CcceeEEccCCceeE-ecC----CCC---
Confidence            355689999999 555443322    8899999999987776531  11  145789999999987 555    334   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL  406 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~  406 (790)
                           +++.+|++++.      ......-...-..-++.++||++++....+     .++..++.+.  ...+.+..   
T Consensus       335 -----~i~~wdlDgn~------~~~W~gvr~~~v~dlait~Dgk~vl~v~~d-----~~i~l~~~e~--~~dr~lis---  393 (519)
T KOG0293|consen  335 -----TIIMWDLDGNI------LGNWEGVRDPKVHDLAITYDGKYVLLVTVD-----KKIRLYNREA--RVDRGLIS---  393 (519)
T ss_pred             -----cEEEecCCcch------hhcccccccceeEEEEEcCCCcEEEEEecc-----cceeeechhh--hhhhcccc---
Confidence                 79999998864      222111111111226788999999888766     4566666554  22121222   


Q ss_pred             ccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          407 TSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       407 ~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                          ....+.+.++|.|++++.....   ..++.+.|++.
T Consensus       394 ----e~~~its~~iS~d~k~~LvnL~---~qei~LWDl~e  426 (519)
T KOG0293|consen  394 ----EEQPITSFSISKDGKLALVNLQ---DQEIHLWDLEE  426 (519)
T ss_pred             ----ccCceeEEEEcCCCcEEEEEcc---cCeeEEeecch
Confidence                3457888999999998877643   34477777763

>KOG0271|consensus

Probab=98.77  E-value=1.5e-06  Score=85.01  Aligned_cols=98  Identities=14%  Similarity=0.183  Sum_probs=59.8

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      .....|||||++|+ .++.    +.        -+-+++-.+|+     ....+..+-..+.. .+||.|.+.|+-.+.+
T Consensus       370 Vn~V~fSPd~r~IA-SaSF----Dk--------SVkLW~g~tGk-----~lasfRGHv~~VYq-vawsaDsRLlVS~SkD  430 (480)
T KOG0271|consen  370 VNHVSFSPDGRYIA-SASF----DK--------SVKLWDGRTGK-----FLASFRGHVAAVYQ-VAWSADSRLLVSGSKD  430 (480)
T ss_pred             eeeEEECCCccEEE-Eeec----cc--------ceeeeeCCCcc-----hhhhhhhccceeEE-EEeccCccEEEEcCCC
Confidence            45689999999998 6762    22        36677777776     12223222223333 7999998755444433


Q ss_pred             CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEE
Q psy463          379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYV  428 (790)
Q Consensus       379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~  428 (790)
                      ..   -.+|.+..+       .|..+   +++....++.+.|||||+.++
T Consensus       431 sT---LKvw~V~tk-------Kl~~D---LpGh~DEVf~vDwspDG~rV~  467 (480)
T KOG0271|consen  431 ST---LKVWDVRTK-------KLKQD---LPGHADEVFAVDWSPDGQRVA  467 (480)
T ss_pred             ce---EEEEEeeee-------eeccc---CCCCCceEEEEEecCCCceee
Confidence            22   456655432       23222   344667888999999999764

>KOG0318|consensus

Probab=98.76  E-value=1.3e-05  Score=81.96  Aligned_cols=148  Identities=14%  Similarity=0.130  Sum_probs=82.9

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      ..+..+.+||||+.++.+..+.   .++++|-.+|+..-.+...  .+..+.....+||||+++|+ +++    .+-   
T Consensus       191 kFV~~VRysPDG~~Fat~gsDg---ki~iyDGktge~vg~l~~~--~aHkGsIfalsWsPDs~~~~-T~S----aDk---  257 (603)
T KOG0318|consen  191 KFVNCVRYSPDGSRFATAGSDG---KIYIYDGKTGEKVGELEDS--DAHKGSIFALSWSPDSTQFL-TVS----ADK---  257 (603)
T ss_pred             cceeeEEECCCCCeEEEecCCc---cEEEEcCCCccEEEEecCC--CCccccEEEEEECCCCceEE-Eec----CCc---
Confidence            4577899999999555554332   2999998888765444421  11222244799999999998 666    222   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccCCCe---EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF---TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                           .+-++|+.+++     ..+.+..+.-   ...+ .-|-  +..|+-.+..|     .|-.++.+.  ..+..+..
T Consensus       258 -----t~KIWdVs~~s-----lv~t~~~~~~v~dqqvG-~lWq--kd~lItVSl~G-----~in~ln~~d--~~~~~~i~  317 (603)
T KOG0318|consen  258 -----TIKIWDVSTNS-----LVSTWPMGSTVEDQQVG-CLWQ--KDHLITVSLSG-----TINYLNPSD--PSVLKVIS  317 (603)
T ss_pred             -----eEEEEEeeccc-----eEEEeecCCchhceEEE-EEEe--CCeEEEEEcCc-----EEEEecccC--CChhheec
Confidence                 35667777766     2333443321   2223 3464  23344444442     222233332  12222221


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecC
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGP  434 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~  434 (790)
                            +++..+..++.++|+++| |+.+-.
T Consensus       318 ------GHnK~ITaLtv~~d~~~i-~SgsyD  341 (603)
T KOG0318|consen  318 ------GHNKSITALTVSPDGKTI-YSGSYD  341 (603)
T ss_pred             ------ccccceeEEEEcCCCCEE-EeeccC
Confidence                  256677788999999876 444333

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.76  E-value=3.7e-05  Score=75.64  Aligned_cols=175  Identities=11%  Similarity=0.114  Sum_probs=104.0

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      .....+.|||+++...+-+.++  |++++++.|..+.........+.  ..+.+.|.|+||..| +..   |-++     
T Consensus       147 ~H~a~~tP~~~~l~v~DLG~Dr--i~~y~~~dg~L~~~~~~~v~~G~--GPRHi~FHpn~k~aY-~v~---EL~s-----  213 (346)
T COG2706         147 VHSANFTPDGRYLVVPDLGTDR--IFLYDLDDGKLTPADPAEVKPGA--GPRHIVFHPNGKYAY-LVN---ELNS-----  213 (346)
T ss_pred             cceeeeCCCCCEEEEeecCCce--EEEEEcccCccccccccccCCCC--CcceEEEcCCCcEEE-EEe---ccCC-----
Confidence            4567899999988888776554  77777777765443322111110  145789999999665 665   5555     


Q ss_pred             cccEEEEEEcCCCCcccCCCcccc----------cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPL----------TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP  398 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~l----------t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~  398 (790)
                       .-.++-++...++      .+.|          +...+  ...+..++||+.||. ++++.. .--+|.++..+  ++.
T Consensus       214 -tV~v~~y~~~~g~------~~~lQ~i~tlP~dF~g~~~--~aaIhis~dGrFLYa-sNRg~d-sI~~f~V~~~~--g~L  280 (346)
T COG2706         214 -TVDVLEYNPAVGK------FEELQTIDTLPEDFTGTNW--AAAIHISPDGRFLYA-SNRGHD-SIAVFSVDPDG--GKL  280 (346)
T ss_pred             -EEEEEEEcCCCce------EEEeeeeccCccccCCCCc--eeEEEECCCCCEEEE-ecCCCC-eEEEEEEcCCC--CEE
Confidence             3445555544454      2222          21122  123788999996655 455431 25566666665  554


Q ss_pred             ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEec
Q psy463          399 ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       399 ~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  453 (790)
                      +.+...   ..+++ .-....++++|++++......+.=.+|.+|-++++++.+.
T Consensus       281 ~~~~~~---~teg~-~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~  331 (346)
T COG2706         281 ELVGIT---PTEGQ-FPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLG  331 (346)
T ss_pred             EEEEEe---ccCCc-CCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecc
Confidence            433321   11111 1234789999999988765555666777787778777643

>KOG0315|consensus

Probab=98.75  E-value=1.1e-05  Score=74.67  Aligned_cols=254  Identities=14%  Similarity=0.153  Sum_probs=140.4

Q ss_pred             eeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcc
Q psy463           82 RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  161 (790)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~  161 (790)
                      ...++.+.+.+|.|..-+.+....     ......+||++.|+-.              .++||-++|+.+++      .
T Consensus        19 DhTIRfWqa~tG~C~rTiqh~dsq-----VNrLeiTpdk~~LAaa--------------~~qhvRlyD~~S~n------p   73 (311)
T KOG0315|consen   19 DHTIRFWQALTGICSRTIQHPDSQ-----VNRLEITPDKKDLAAA--------------GNQHVRLYDLNSNN------P   73 (311)
T ss_pred             cceeeeeehhcCeEEEEEecCccc-----eeeEEEcCCcchhhhc--------------cCCeeEEEEccCCC------C
Confidence            344566777788888755543211     0123558888877731              26799999998885      2


Q ss_pred             eeccccceEEEEEEe--eeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcc
Q psy463          162 VPLTRGRFTVTEILA--WDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWD  239 (790)
Q Consensus       162 ~~lt~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~  239 (790)
                      .++...+....|+.+  +..+++  ..|.+.   .|+      .-.||  |+..-..++.      -             
T Consensus        74 ~Pv~t~e~h~kNVtaVgF~~dgr--WMyTgs---eDg------t~kIW--dlR~~~~qR~------~-------------  121 (311)
T KOG0315|consen   74 NPVATFEGHTKNVTAVGFQCDGR--WMYTGS---EDG------TVKIW--DLRSLSCQRN------Y-------------  121 (311)
T ss_pred             CceeEEeccCCceEEEEEeecCe--EEEecC---CCc------eEEEE--eccCcccchh------c-------------
Confidence            333333333334433  333332  333322   111      12344  4333222111      1             


Q ss_pred             cCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463          240 EKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ  319 (790)
Q Consensus       240 ~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~  319 (790)
                          ....-+..+...|+..-++..++..   .|.+.|+....+....-.+.+    ....+....|||+.++ -+.   
T Consensus       122 ----~~~spVn~vvlhpnQteLis~dqsg---~irvWDl~~~~c~~~liPe~~----~~i~sl~v~~dgsml~-a~n---  186 (311)
T KOG0315|consen  122 ----QHNSPVNTVVLHPNQTELISGDQSG---NIRVWDLGENSCTHELIPEDD----TSIQSLTVMPDGSMLA-AAN---  186 (311)
T ss_pred             ----cCCCCcceEEecCCcceEEeecCCC---cEEEEEccCCccccccCCCCC----cceeeEEEcCCCcEEE-Eec---
Confidence                1223345677778776333433332   289999988766544332221    1245788999999887 333   


Q ss_pred             ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC---CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCC
Q psy463          320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR---GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTA  396 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~  396 (790)
                       ..|        ..|++++-++.+.+.  ..++++   ....+.. -.+|||+|+|+-.+.+     ..+++.+.++  .
T Consensus       187 -nkG--------~cyvW~l~~~~~~s~--l~P~~k~~ah~~~il~-C~lSPd~k~lat~ssd-----ktv~iwn~~~--~  247 (311)
T KOG0315|consen  187 -NKG--------NCYVWRLLNHQTASE--LEPVHKFQAHNGHILR-CLLSPDVKYLATCSSD-----KTVKIWNTDD--F  247 (311)
T ss_pred             -CCc--------cEEEEEccCCCcccc--ceEhhheecccceEEE-EEECCCCcEEEeecCC-----ceEEEEecCC--c
Confidence             456        688888866542221  223332   2322333 5689999999888777     3444444444  2


Q ss_pred             -Cc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463          397 -TP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG  433 (790)
Q Consensus       397 -~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~  433 (790)
                       +. ..|++       ++..+..-.||.||+||+...+.
T Consensus       248 ~kle~~l~g-------h~rWvWdc~FS~dg~YlvTassd  279 (311)
T KOG0315|consen  248 FKLELVLTG-------HQRWVWDCAFSADGEYLVTASSD  279 (311)
T ss_pred             eeeEEEeec-------CCceEEeeeeccCccEEEecCCC
Confidence             22 23333       56677788999999999765444

>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic

Probab=98.73  E-value=2.5e-07  Score=85.12  Aligned_cols=156  Identities=18%  Similarity=0.083  Sum_probs=93.2

Q ss_pred             EEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCC
Q psy463          504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDK  583 (790)
Q Consensus       504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~  583 (790)
                      |+++||..++.  .+.|...+..++-. . +.|-.++.-                     -.++...+..|.+....+| 
T Consensus         1 v~IvhG~~~s~--~~HW~~wl~~~l~~-~-~~V~~~~~~---------------------~P~~~~W~~~l~~~i~~~~-   54 (171)
T PF06821_consen    1 VLIVHGYGGSP--PDHWQPWLERQLEN-S-VRVEQPDWD---------------------NPDLDEWVQALDQAIDAID-   54 (171)
T ss_dssp             EEEE--TTSST--TTSTHHHHHHHHTT-S-EEEEEC--T---------------------S--HHHHHHHHHHCCHC-T-
T ss_pred             CEEeCCCCCCC--ccHHHHHHHHhCCC-C-eEEeccccC---------------------CCCHHHHHHHHHHHHhhcC-
Confidence            57899987764  35566544444443 3 666665541                     1233445556655333344 


Q ss_pred             CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcE
Q psy463          584 TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQY  663 (790)
Q Consensus       584 ~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~  663 (790)
                      ..+.++|||.|+..++.++.......++++++++|...-..        . ..+      ...         ..+.    
T Consensus        55 ~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~--------~-~~~------~~~---------~~f~----  106 (171)
T PF06821_consen   55 EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDP--------E-PFP------PEL---------DGFT----  106 (171)
T ss_dssp             TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCH--------H-CCT------CGG---------CCCT----
T ss_pred             CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccc--------c-chh------hhc---------cccc----
Confidence            46999999999999999984445569999999999632100        0 000      000         0000    


Q ss_pred             EEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhh
Q psy463          664 LLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQ  743 (790)
Q Consensus       664 l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~  743 (790)
                                                .                           .....+ ..|.+++.+++|+.||++.
T Consensus       107 --------------------------~---------------------------~p~~~l-~~~~~viaS~nDp~vp~~~  132 (171)
T PF06821_consen  107 --------------------------P---------------------------LPRDPL-PFPSIVIASDNDPYVPFER  132 (171)
T ss_dssp             --------------------------T---------------------------SHCCHH-HCCEEEEEETTBSSS-HHH
T ss_pred             --------------------------c---------------------------Cccccc-CCCeEEEEcCCCCccCHHH
Confidence                                      0                           011223 5677999999999999999


Q ss_pred             hHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          744 SMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       744 ~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                      +..+++.|..     +++.++++||....
T Consensus       133 a~~~A~~l~a-----~~~~~~~~GHf~~~  156 (171)
T PF06821_consen  133 AQRLAQRLGA-----ELIILGGGGHFNAA  156 (171)
T ss_dssp             HHHHHHHHT------EEEEETS-TTSSGG
T ss_pred             HHHHHHHcCC-----CeEECCCCCCcccc
Confidence            9999999853     88999999998765

The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.

>PRK13616 lipoprotein LpqB; Provisional

Probab=98.73  E-value=9.5e-07  Score=97.65  Aligned_cols=78  Identities=14%  Similarity=0.194  Sum_probs=46.2

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEE---EECCCCceeEEEEEe-CCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITR---CSINEGTCDVVFSRD-LDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~---~~~~~g~~~~l~~~~-~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .+..+.|||||+.+++...+    +|++   ....+|+ ..|+... ......+......|..|++ |+ +..    ..+
T Consensus       449 ~Issl~wSpDG~RiA~i~~g----~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~-L~-V~~----~~~  517 (591)
T PRK13616        449 PISELQLSRDGVRAAMIIGG----KVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDS-LV-VGR----SDP  517 (591)
T ss_pred             CcCeEEECCCCCEEEEEECC----EEEEEEEEeCCCCc-eeecccEEeecccCCccccceEecCCE-EE-EEe----cCC
Confidence            47789999999965555432    3666   5555665 3332110 0011111134689999998 55 333    233


Q ss_pred             CCCcCcccEEEEEEcCCCC
Q psy463          324 STPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~  342 (790)
                            ...++.+++++..
T Consensus       518 ------~~~v~~v~vDG~~  530 (591)
T PRK13616        518 ------EHPVWYVNLDGSN  530 (591)
T ss_pred             ------CCceEEEecCCcc
Confidence                  4579999998765

>COG4188 Predicted dienelactone hydrolase [General function prediction only]

Probab=98.72  E-value=1.3e-07  Score=94.51  Aligned_cols=122  Identities=24%  Similarity=0.222  Sum_probs=84.5

Q ss_pred             CcEEEEEEEeCCCCCC-CCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          480 NMEAQVKLFLPPGIDT-SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       480 g~~i~~~~~~P~~~~~-~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +.++...++.|..... ..-...|+|++.||.+...   .  .+.|..+.+++.||+|..++..|+..-+.+-.......
T Consensus        49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~---~--~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~  123 (365)
T COG4188          49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYV---T--GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGS  123 (365)
T ss_pred             CCccccceeccCCCccccccCcCCeEEecCCCCCCc---c--chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcc
Confidence            5677778888876430 0113789999999977652   2  35677888888999999999999654333222222111


Q ss_pred             ----CCccchhHHHHHHHHHHHh------CCCcCCCceEEEEechHHHHHHHHHhcCC
Q psy463          559 ----LGTVEIYDQINVTRYLQEN------LPYIDKTRTAIWGWSYGGYATGLALALDP  606 (790)
Q Consensus       559 ----~~~~~~~D~~~~~~~l~~~------~~~~d~~ri~i~G~S~GG~~a~~~a~~~p  606 (790)
                          .......|+...+++|.+.      .+.+|..+|+++|||+||+.++.++.-+.
T Consensus       124 ~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~  181 (365)
T COG4188         124 YAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL  181 (365)
T ss_pred             cchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccc
Confidence                1124567888888888762      13578899999999999999998876443

>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]

Probab=98.71  E-value=7.7e-07  Score=90.05  Aligned_cols=101  Identities=17%  Similarity=0.131  Sum_probs=63.9

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHh--cCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLAD--NKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~--~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      .|.++++||.++..   ..|.... ..+..  .. |.++.+|.||++.+. ..         ........+.+..+.+.+
T Consensus        21 ~~~i~~~hg~~~~~---~~~~~~~-~~~~~~~~~-~~~~~~d~~g~g~s~-~~---------~~~~~~~~~~~~~~~~~~   85 (282)
T COG0596          21 GPPLVLLHGFPGSS---SVWRPVF-KVLPALAAR-YRVIAPDLRGHGRSD-PA---------GYSLSAYADDLAALLDAL   85 (282)
T ss_pred             CCeEEEeCCCCCch---hhhHHHH-HHhhccccc-eEEEEecccCCCCCC-cc---------cccHHHHHHHHHHHHHHh
Confidence            34899999998763   2222211 11111  12 899999999877654 00         011112233344444433


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      +   ..++.++|||+||.++..++.++|. .++.++..++..
T Consensus        86 ~---~~~~~l~G~S~Gg~~~~~~~~~~p~-~~~~~v~~~~~~  123 (282)
T COG0596          86 G---LEKVVLVGHSMGGAVALALALRHPD-RVRGLVLIGPAP  123 (282)
T ss_pred             C---CCceEEEEecccHHHHHHHHHhcch-hhheeeEecCCC
Confidence            3   2459999999999999999999986 788877777654

>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II

Probab=98.71  E-value=3.4e-07  Score=97.90  Aligned_cols=89  Identities=13%  Similarity=0.081  Sum_probs=60.1

Q ss_pred             hHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHH---
Q psy463          524 WNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGL---  600 (790)
Q Consensus       524 ~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~---  600 (790)
                      +..++++ +|+.|+.+|.+..+.....+.-.      .+ +..+.++++.+.+.   ....+|.++|+|+||.+++.   
T Consensus       239 lVr~lv~-qG~~VflIsW~nP~~~~r~~~ld------DY-v~~i~~Ald~V~~~---tG~~~vnl~GyC~GGtl~a~~~a  307 (560)
T TIGR01839       239 FVQYCLK-NQLQVFIISWRNPDKAHREWGLS------TY-VDALKEAVDAVRAI---TGSRDLNLLGACAGGLTCAALVG  307 (560)
T ss_pred             HHHHHHH-cCCeEEEEeCCCCChhhcCCCHH------HH-HHHHHHHHHHHHHh---cCCCCeeEEEECcchHHHHHHHH
Confidence            4555555 99999999998744322211111      11 23556677777663   33578999999999999986   


Q ss_pred             -HHhcCCCCceEEEEEeCCCCCcc
Q psy463          601 -ALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       601 -~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                       +++++++.+++.++......|+.
T Consensus       308 ~~aA~~~~~~V~sltllatplDf~  331 (560)
T TIGR01839       308 HLQALGQLRKVNSLTYLVSLLDST  331 (560)
T ss_pred             HHHhcCCCCceeeEEeeecccccC
Confidence             67777655788888777776654

This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.

>KOG2112|consensus

Probab=98.69  E-value=5.5e-07  Score=82.14  Aligned_cols=60  Identities=23%  Similarity=0.297  Sum_probs=53.1

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHH
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDS  787 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~  787 (790)
                      .+|+++.||+.|+.||..-.+...+.|+..+.++++.-|++.+|....   +-+..+..|+.+
T Consensus       144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~---~e~~~~~~~~~~  203 (206)
T KOG2112|consen  144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP---QELDDLKSWIKT  203 (206)
T ss_pred             cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccH---HHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999998864   455677777765

>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]

Probab=98.69  E-value=4.2e-07  Score=90.52  Aligned_cols=271  Identities=17%  Similarity=0.133  Sum_probs=138.1

Q ss_pred             CCccEEEEEcCCCCcccccccccc---chHHHHH------hcCCeEEEEEcCCCCC-CChhhhHh-hh---h-ccCCccc
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSV---DWNLYLA------DNKDIVVAYIDGRNSA-LKGNTLKY-AG---Y-RRLGTVE  563 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~---~~~~~~~------~~~G~~v~~~d~rG~~-~~g~~~~~-~~---~-~~~~~~~  563 (790)
                      .+-.+|+++|+..++..+......   .|...++      .-..|.|+++|..|++ ++..+... ..   + ..+....
T Consensus        49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t  128 (368)
T COG2021          49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT  128 (368)
T ss_pred             cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence            345689999998875443332111   2444332      2246889999999877 33222111 11   1 1223356


Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceE-EEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc----hhhhcCCCC
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTA-IWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY----SERYMGLPT  638 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~-i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~----~~~~~g~~~  638 (790)
                      +.|.+.+-+.++++++ |  ++++ |+|.||||+.++..+..+|+ .+..++.++.-.....+.-.|    .+.+..-| 
T Consensus       129 i~D~V~aq~~ll~~LG-I--~~l~avvGgSmGGMqaleWa~~yPd-~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP-  203 (368)
T COG2021         129 IRDMVRAQRLLLDALG-I--KKLAAVVGGSMGGMQALEWAIRYPD-RVRRAIPIATAARLSAQNIAFNEVQRQAIEADP-  203 (368)
T ss_pred             HHHHHHHHHHHHHhcC-c--ceEeeeeccChHHHHHHHHHHhChH-HHhhhheecccccCCHHHHHHHHHHHHHHHhCC-
Confidence            7888888888888666 3  5555 99999999999999999997 554444444322221111111    11111111 


Q ss_pred             ccCchhhh-h------------------hccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc----hhc
Q psy463          639 FEDNLEGY-K------------------IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM----FQS  695 (790)
Q Consensus       639 ~~~~~~~~-~------------------~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~----~~~  695 (790)
                       ..+...| .                  -.+.....+++.+ ...     .+....-..-.+.-..|..++-.    |..
T Consensus       204 -~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r-~~~-----~~~~~~~~~~f~vESYL~~qg~kf~~rfDa  276 (368)
T COG2021         204 -DWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGR-RLQ-----ADPLRGGGVRFAVESYLDYQGDKFVARFDA  276 (368)
T ss_pred             -CccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcc-ccc-----ccccCCCchhHHHHHHHHHHHHHHHhccCc
Confidence             0000001 0                  0111111111110 000     01000000001111111111110    000


Q ss_pred             ccccCC---CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEc-CCCCCcCC
Q psy463          696 QRYMGL---PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTY-PDEEHGLI  771 (790)
Q Consensus       696 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~-p~~~H~~~  771 (790)
                      ..|...   ....+....  ..++...++++ ++|+|++.=+.|...|+++..++.+.|+..+.   +.++ ...||.-+
T Consensus       277 NsYL~lt~ald~~D~s~~--~~~l~~al~~i-~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~---~~~i~S~~GHDaF  350 (368)
T COG2021         277 NSYLYLTRALDYHDVSRG--RGDLTAALARI-KAPVLVVGITSDWLFPPELQRALAEALPAAGA---LREIDSPYGHDAF  350 (368)
T ss_pred             chHHHHHHHHHhcCCCCC--cCcHHHHHhcC-ccCEEEEEecccccCCHHHHHHHHHhccccCc---eEEecCCCCchhh
Confidence            000000   000000000  12334557889 89999999999999999999999999998865   4344 45688665


Q ss_pred             C-cchHHHHHHHHHHHH
Q psy463          772 G-VRPHFYHTLERFLDS  787 (790)
Q Consensus       772 ~-~~~~~~~~i~~fl~~  787 (790)
                      . ..+.+...|..||+.
T Consensus       351 L~e~~~~~~~i~~fL~~  367 (368)
T COG2021         351 LVESEAVGPLIRKFLAL  367 (368)
T ss_pred             hcchhhhhHHHHHHhhc
Confidence            5 666777888888864

>PRK13616 lipoprotein LpqB; Provisional

Probab=98.68  E-value=7.8e-07  Score=98.30  Aligned_cols=118  Identities=15%  Similarity=0.286  Sum_probs=71.4

Q ss_pred             EEEEEEccCCcEEEEEecc---------CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463          249 LSRVNWANESVVAAWVNRV---------QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ  319 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~---------~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~  319 (790)
                      +..|+|||||+.+.+..++         ....+++++++++++.++  ...      .....++|||||++|+|+..   
T Consensus       399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~------g~Issl~wSpDG~RiA~i~~---  467 (591)
T PRK13616        399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVP------GPISELQLSRDGVRAAMIIG---  467 (591)
T ss_pred             CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--ccC------CCcCeEEECCCCCEEEEEEC---
Confidence            6789999998844444322         233467777777776654  111      12568999999999997653   


Q ss_pred             ccCCCCCcCcccEEEE---EEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          320 ESDGSTPVDSWDHLTF---IDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~---~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                         |        +|++   ...++|+ .....++.|+.+.......+.|..++. |+.......   ..+|.+++++
T Consensus       468 ---g--------~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~-L~V~~~~~~---~~v~~v~vDG  528 (591)
T PRK13616        468 ---G--------KVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDS-LVVGRSDPE---HPVWYVNLDG  528 (591)
T ss_pred             ---C--------EEEEEEEEeCCCCc-eeecccEEeecccCCccccceEecCCE-EEEEecCCC---CceEEEecCC
Confidence               4        5666   4434453 000112335544333212378999887 655544433   6799999987

>KOG0291|consensus

Probab=98.67  E-value=8.1e-05  Score=79.59  Aligned_cols=146  Identities=16%  Similarity=0.182  Sum_probs=96.3

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      ..+..++.||||++++.-..+.   .+.+++..+|-|..-+.+....     .....|+.+|+.++ ..+    -+|   
T Consensus       351 ~~i~~l~YSpDgq~iaTG~eDg---KVKvWn~~SgfC~vTFteHts~-----Vt~v~f~~~g~~ll-ssS----LDG---  414 (893)
T KOG0291|consen  351 DRITSLAYSPDGQLIATGAEDG---KVKVWNTQSGFCFVTFTEHTSG-----VTAVQFTARGNVLL-SSS----LDG---  414 (893)
T ss_pred             cceeeEEECCCCcEEEeccCCC---cEEEEeccCceEEEEeccCCCc-----eEEEEEEecCCEEE-Eee----cCC---
Confidence            4467899999999555433222   2888999999898766654321     55789999999776 665    577   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL  406 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~  406 (790)
                           .+-.+|+....     ..+.+|...-..-.-++.+|.|. |++.+....   ..|++.+..+  |+...+-.   
T Consensus       415 -----tVRAwDlkRYr-----NfRTft~P~p~QfscvavD~sGe-lV~AG~~d~---F~IfvWS~qT--GqllDiLs---  475 (893)
T KOG0291|consen  415 -----TVRAWDLKRYR-----NFRTFTSPEPIQFSCVAVDPSGE-LVCAGAQDS---FEIFVWSVQT--GQLLDILS---  475 (893)
T ss_pred             -----eEEeeeecccc-----eeeeecCCCceeeeEEEEcCCCC-EEEeeccce---EEEEEEEeec--Ceeeehhc---
Confidence                 46667775433     14445543221222367788787 666665544   7888888877  55433322   


Q ss_pred             ccCCCcccEEEEEEecCCcEEEEE
Q psy463          407 TSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       407 ~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                         ++.+.++..+|+|+|..++-.
T Consensus       476 ---GHEgPVs~l~f~~~~~~LaS~  496 (893)
T KOG0291|consen  476 ---GHEGPVSGLSFSPDGSLLASG  496 (893)
T ss_pred             ---CCCCcceeeEEccccCeEEec
Confidence               377888999999999977543

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.67  E-value=3.2e-05  Score=79.17  Aligned_cols=124  Identities=13%  Similarity=0.192  Sum_probs=71.7

Q ss_pred             ceeEcc-CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC----CeEEe--EEEeeecCCCEEE
Q psy463          301 HLRFSS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG----RFTVT--EILAWDEKENNVY  373 (790)
Q Consensus       301 ~~~~sp-Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~----~~~~~--~~~~~s~dg~~l~  373 (790)
                      .|.+++ ||+.++ ...   +  |        .|+++|+.+.+.........++.+    .|...  ...++++||+++|
T Consensus       198 rP~~~~~dg~~~~-vs~---e--G--------~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~ly  263 (352)
T TIGR02658       198 HPAYSNKSGRLVW-PTY---T--G--------KIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIY  263 (352)
T ss_pred             CCceEcCCCcEEE-Eec---C--C--------eEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEE
Confidence            556777 887665 454   2  6        799999765431000001112211    11111  1278899999999


Q ss_pred             EEEcCCC-----CceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          374 FLSTQGS-----PIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       374 ~~~~~~~-----~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      +....+.     ....+|++++..+  ++. ..+.-       + .....+.+|||++.++|..++. ...|.++|..++
T Consensus       264 V~~~~~~~~thk~~~~~V~ViD~~t--~kvi~~i~v-------G-~~~~~iavS~Dgkp~lyvtn~~-s~~VsViD~~t~  332 (352)
T TIGR02658       264 LLADQRAKWTHKTASRFLFVVDAKT--GKRLRKIEL-------G-HEIDSINVSQDAKPLLYALSTG-DKTLYIFDAETG  332 (352)
T ss_pred             EEecCCccccccCCCCEEEEEECCC--CeEEEEEeC-------C-CceeeEEECCCCCeEEEEeCCC-CCcEEEEECcCC
Confidence            9653311     1225899999877  433 22221       2 2566789999999555654443 345889998775


Q ss_pred             eE
Q psy463          448 RL  449 (790)
Q Consensus       448 ~~  449 (790)
                      +.
T Consensus       333 k~  334 (352)
T TIGR02658       333 KE  334 (352)
T ss_pred             eE
Confidence            43

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases

Probab=98.66  E-value=2.4e-06  Score=79.13  Aligned_cols=234  Identities=13%  Similarity=0.112  Sum_probs=117.4

Q ss_pred             EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC-Chhhh
Q psy463          473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL-KGNTL  551 (790)
Q Consensus       473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~-~g~~~  551 (790)
                      ..+...+|.+|..|...|++-.   ..+.|+|++.-|++..   .+.|. ..+ ++++..||.|+.+|.-.+-| +....
T Consensus         5 hvi~~~~~~~I~vwet~P~~~~---~~~~~tiliA~Gf~rr---mdh~a-gLA-~YL~~NGFhViRyDsl~HvGlSsG~I   76 (294)
T PF02273_consen    5 HVIRLEDGRQIRVWETRPKNNE---PKRNNTILIAPGFARR---MDHFA-GLA-EYLSANGFHVIRYDSLNHVGLSSGDI   76 (294)
T ss_dssp             EEEEETTTEEEEEEEE---TTS------S-EEEEE-TT-GG---GGGGH-HHH-HHHHTTT--EEEE---B---------
T ss_pred             ceeEcCCCCEEEEeccCCCCCC---cccCCeEEEecchhHH---HHHHH-HHH-HHHhhCCeEEEeccccccccCCCCCh
Confidence            3456668999999999998643   4556888888887654   22222 233 44455999999999764322 21111


Q ss_pred             HhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc-cccch
Q psy463          552 KYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY-DTIYS  630 (790)
Q Consensus       552 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~-~~~~~  630 (790)
                      .+-    .......++..+++|+.. .+   ..+++++..|..|-+|...+.+ .  ....+|...|+.++..- ...+.
T Consensus        77 ~ef----tms~g~~sL~~V~dwl~~-~g---~~~~GLIAaSLSaRIAy~Va~~-i--~lsfLitaVGVVnlr~TLe~al~  145 (294)
T PF02273_consen   77 NEF----TMSIGKASLLTVIDWLAT-RG---IRRIGLIAASLSARIAYEVAAD-I--NLSFLITAVGVVNLRDTLEKALG  145 (294)
T ss_dssp             --------HHHHHHHHHHHHHHHHH-TT------EEEEEETTHHHHHHHHTTT-S----SEEEEES--S-HHHHHHHHHS
T ss_pred             hhc----chHHhHHHHHHHHHHHHh-cC---CCcchhhhhhhhHHHHHHHhhc-c--CcceEEEEeeeeeHHHHHHHHhc
Confidence            100    001235778889999987 56   4679999999999999999983 3  35566666688887531 11122


Q ss_pred             hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463          631 ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG  710 (790)
Q Consensus       631 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  710 (790)
                      .-|++.+                 .+.+...  +-+.|      +--.+..++....+.+-.                  
T Consensus       146 ~Dyl~~~-----------------i~~lp~d--ldfeG------h~l~~~vFv~dc~e~~w~------------------  182 (294)
T PF02273_consen  146 YDYLQLP-----------------IEQLPED--LDFEG------HNLGAEVFVTDCFEHGWD------------------  182 (294)
T ss_dssp             S-GGGS------------------GGG--SE--EEETT------EEEEHHHHHHHHHHTT-S------------------
T ss_pred             cchhhcc-----------------hhhCCCc--ccccc------cccchHHHHHHHHHcCCc------------------
Confidence            2222222                 1111100  00101      011122233222222211                  


Q ss_pred             hhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          711 YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       711 ~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                       .-.+..+.++++ .+|++.+++.+|.-|...+..++...+...  .+++..++|+.|....
T Consensus       183 -~l~ST~~~~k~l-~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~--~~klysl~Gs~HdL~e  240 (294)
T PF02273_consen  183 -DLDSTINDMKRL-SIPFIAFTANDDDWVKQSEVEELLDNINSN--KCKLYSLPGSSHDLGE  240 (294)
T ss_dssp             -SHHHHHHHHTT---S-EEEEEETT-TTS-HHHHHHHHTT-TT----EEEEEETT-SS-TTS
T ss_pred             -cchhHHHHHhhC-CCCEEEEEeCCCccccHHHHHHHHHhcCCC--ceeEEEecCccchhhh
Confidence             122344778889 999999999999999988888887776654  4689999999998875

Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.

>KOG0293|consensus

Probab=98.65  E-value=1.8e-06  Score=85.17  Aligned_cols=284  Identities=13%  Similarity=0.147  Sum_probs=149.1

Q ss_pred             ceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC
Q psy463           11 SALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI   90 (790)
Q Consensus        11 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~   90 (790)
                      +-.-|||+||+||-++. +...-+|.+..++.-     .....+..+...+.-+.|+||.+.+.--   .....+.++++
T Consensus       228 Wfl~FS~nGkyLAsaSk-D~Taiiw~v~~d~~~-----kl~~tlvgh~~~V~yi~wSPDdryLlaC---g~~e~~~lwDv  298 (519)
T KOG0293|consen  228 WFLQFSHNGKYLASASK-DSTAIIWIVVYDVHF-----KLKKTLVGHSQPVSYIMWSPDDRYLLAC---GFDEVLSLWDV  298 (519)
T ss_pred             EEEEEcCCCeeEeeccC-CceEEEEEEecCcce-----eeeeeeecccCceEEEEECCCCCeEEec---CchHheeeccC
Confidence            45569999999998775 444556666654431     0111111122223335688777654221   12334778899


Q ss_pred             CCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceE
Q psy463           91 NEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT  170 (790)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~  170 (790)
                      .+|.+++.+....  +-  ....=+|-|||.+++--+             .-++++..++++....    .++=...  +
T Consensus       299 ~tgd~~~~y~~~~--~~--S~~sc~W~pDg~~~V~Gs-------------~dr~i~~wdlDgn~~~----~W~gvr~--~  355 (519)
T KOG0293|consen  299 DTGDLRHLYPSGL--GF--SVSSCAWCPDGFRFVTGS-------------PDRTIIMWDLDGNILG----NWEGVRD--P  355 (519)
T ss_pred             CcchhhhhcccCc--CC--CcceeEEccCCceeEecC-------------CCCcEEEecCCcchhh----ccccccc--c
Confidence            8998887766431  00  012347889999866422             2348999999876311    1111000  0


Q ss_pred             EEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEE
Q psy463          171 VTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLS  250 (790)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~  250 (790)
                      -..-++..++++. ++.+.            ...+|..++.++...      +.+.                 ..+..++
T Consensus       356 ~v~dlait~Dgk~-vl~v~------------~d~~i~l~~~e~~~d------r~li-----------------se~~~it  399 (519)
T KOG0293|consen  356 KVHDLAITYDGKY-VLLVT------------VDKKIRLYNREARVD------RGLI-----------------SEEQPIT  399 (519)
T ss_pred             eeEEEEEcCCCcE-EEEEe------------cccceeeechhhhhh------hccc-----------------cccCcee
Confidence            0111233334432 22211            225777777776442      2222                 3456678


Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  330 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~  330 (790)
                      +.+.|.||+++...-..+   .+.+.|++.....+-+..-....++  . .-.|.--...++...+    .++       
T Consensus       400 s~~iS~d~k~~LvnL~~q---ei~LWDl~e~~lv~kY~Ghkq~~fi--I-rSCFgg~~~~fiaSGS----ED~-------  462 (519)
T KOG0293|consen  400 SFSISKDGKLALVNLQDQ---EIHLWDLEENKLVRKYFGHKQGHFI--I-RSCFGGGNDKFIASGS----EDS-------  462 (519)
T ss_pred             EEEEcCCCcEEEEEcccC---eeEEeecchhhHHHHhhcccccceE--E-EeccCCCCcceEEecC----CCc-------
Confidence            999999999554443332   2888888743321111100000000  0 0112111112332444    344       


Q ss_pred             cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463          331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR  388 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  388 (790)
                       ++|+++..+|+     ....|+.+...+.- ++|+|.....+..+.+.+  ..+||.
T Consensus       463 -kvyIWhr~sgk-----ll~~LsGHs~~vNc-VswNP~~p~m~ASasDDg--tIRIWg  511 (519)
T KOG0293|consen  463 -KVYIWHRISGK-----LLAVLSGHSKTVNC-VSWNPADPEMFASASDDG--TIRIWG  511 (519)
T ss_pred             -eEEEEEccCCc-----eeEeecCCcceeeE-EecCCCCHHHhhccCCCC--eEEEec
Confidence             79999988887     35567766655554 899999887666555521  256664

>KOG0291|consensus

Probab=98.63  E-value=2.2e-05  Score=83.78  Aligned_cols=240  Identities=15%  Similarity=0.180  Sum_probs=139.7

Q ss_pred             ceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC
Q psy463           11 SALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI   90 (790)
Q Consensus        11 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~   90 (790)
                      ..+.|+--|.||||-+..-|..-+|.+...        .+..-...++.....+..++|+..+.   .+...-.+.+|+.
T Consensus       311 ~t~~~N~tGDWiA~g~~klgQLlVweWqsE--------sYVlKQQgH~~~i~~l~YSpDgq~ia---TG~eDgKVKvWn~  379 (893)
T KOG0291|consen  311 LTVSFNSTGDWIAFGCSKLGQLLVWEWQSE--------SYVLKQQGHSDRITSLAYSPDGQLIA---TGAEDGKVKVWNT  379 (893)
T ss_pred             eEEEecccCCEEEEcCCccceEEEEEeecc--------ceeeeccccccceeeEEECCCCcEEE---eccCCCcEEEEec
Confidence            457799999999998876565555555442        22222333455555566666665432   2233446778888


Q ss_pred             CCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceE
Q psy463           91 NEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT  170 (790)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~  170 (790)
                      .+|-|..-++++..+-     ....|+..|+.++ +++.++            .+-.+|+....     ..+-.|...--
T Consensus       380 ~SgfC~vTFteHts~V-----t~v~f~~~g~~ll-ssSLDG------------tVRAwDlkRYr-----NfRTft~P~p~  436 (893)
T KOG0291|consen  380 QSGFCFVTFTEHTSGV-----TAVQFTARGNVLL-SSSLDG------------TVRAWDLKRYR-----NFRTFTSPEPI  436 (893)
T ss_pred             cCceEEEEeccCCCce-----EEEEEEecCCEEE-EeecCC------------eEEeeeecccc-----eeeeecCCCce
Confidence            8888988877655431     1247888887544 555544            23333433221     12222222111


Q ss_pred             EEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEE
Q psy463          171 VTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLS  250 (790)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~  250 (790)
                      -..-++.|+.+.  +++...-          ....|++.++++|+-.     ..|.                 +.++-+.
T Consensus       437 QfscvavD~sGe--lV~AG~~----------d~F~IfvWS~qTGqll-----DiLs-----------------GHEgPVs  482 (893)
T KOG0291|consen  437 QFSCVAVDPSGE--LVCAGAQ----------DSFEIFVWSVQTGQLL-----DILS-----------------GHEGPVS  482 (893)
T ss_pred             eeeEEEEcCCCC--EEEeecc----------ceEEEEEEEeecCeee-----ehhc-----------------CCCCcce
Confidence            222246676655  6766542          1268999999999742     2233                 6677788


Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  330 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~  330 (790)
                      .++++|+|..++..+.+.+ -++|-+=-..++...+--...       .-...|+|||+.|++...     +|       
T Consensus       483 ~l~f~~~~~~LaS~SWDkT-VRiW~if~s~~~vEtl~i~sd-------vl~vsfrPdG~elaVaTl-----dg-------  542 (893)
T KOG0291|consen  483 GLSFSPDGSLLASGSWDKT-VRIWDIFSSSGTVETLEIRSD-------VLAVSFRPDGKELAVATL-----DG-------  542 (893)
T ss_pred             eeEEccccCeEEeccccce-EEEEEeeccCceeeeEeeccc-------eeEEEEcCCCCeEEEEEe-----cc-------
Confidence            9999999997766655433 224443333344444322210       347899999999995443     55       


Q ss_pred             cEEEEEEcC
Q psy463          331 DHLTFIDLD  339 (790)
Q Consensus       331 ~~l~~~d~~  339 (790)
                       +|-.+|..
T Consensus       543 -qItf~d~~  550 (893)
T KOG0291|consen  543 -QITFFDIK  550 (893)
T ss_pred             -eEEEEEhh
Confidence             56666654

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=98.63  E-value=1.8e-06  Score=81.90  Aligned_cols=106  Identities=18%  Similarity=0.312  Sum_probs=61.9

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      .+.+..++|||+|+.++......+ ..+.+++++   ...+..-...     ......|||+|+.|++ ++.+ +..|  
T Consensus        59 ~~~I~~~~WsP~g~~favi~g~~~-~~v~lyd~~---~~~i~~~~~~-----~~n~i~wsP~G~~l~~-~g~~-n~~G--  125 (194)
T PF08662_consen   59 EGPIHDVAWSPNGNEFAVIYGSMP-AKVTLYDVK---GKKIFSFGTQ-----PRNTISWSPDGRFLVL-AGFG-NLNG--  125 (194)
T ss_pred             CCceEEEEECcCCCEEEEEEccCC-cccEEEcCc---ccEeEeecCC-----CceEEEECCCCCEEEE-EEcc-CCCc--
Confidence            345889999999994333322111 147777765   2222222211     1346899999998884 4311 1223  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                            .|.++|....+      ........ .. ....|||||++++..+..
T Consensus       126 ------~l~~wd~~~~~------~i~~~~~~-~~-t~~~WsPdGr~~~ta~t~  164 (194)
T PF08662_consen  126 ------DLEFWDVRKKK------KISTFEHS-DA-TDVEWSPDGRYLATATTS  164 (194)
T ss_pred             ------EEEEEECCCCE------EeeccccC-cE-EEEEEcCCCCEEEEEEec
Confidence                  68899987554      22111112 22 348999999988876654

>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc

Probab=98.62  E-value=8.2e-08  Score=106.77  Aligned_cols=130  Identities=22%  Similarity=0.236  Sum_probs=87.3

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCC-eEEEEEcCC-CCCCChhhhHhhhhccCC
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKD-IVVAYIDGR-NSALKGNTLKYAGYRRLG  560 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G-~~v~~~d~r-G~~~~g~~~~~~~~~~~~  560 (790)
                      +...++.|....  ..+++|+||++|||+........+   ....+++..+ ++|+.++|| |.-++......   ...+
T Consensus        79 l~l~i~~p~~~~--~~~~~pv~v~ihGG~~~~g~~~~~---~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~  150 (493)
T cd00312          79 LYLNVYTPKNTK--PGNSLPVMVWIHGGGFMFGSGSLY---PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPG  150 (493)
T ss_pred             CeEEEEeCCCCC--CCCCCCEEEEEcCCccccCCCCCC---ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCc
Confidence            555677787543  356789999999998764322221   2334444344 999999999 65443322111   1122


Q ss_pred             ccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCCC
Q psy463          561 TVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVTD  621 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~~  621 (790)
                      ...+.|+..+++|+.++   ++ .|+++|.|+|+|.||.++..++.... ...|+.+|+.+|...
T Consensus       151 n~g~~D~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~  214 (493)
T cd00312         151 NYGLKDQRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL  214 (493)
T ss_pred             chhHHHHHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence            33478999999998764   34 79999999999999999988877521 236888887776543

) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.62  E-value=1.6e-05  Score=83.62  Aligned_cols=277  Identities=15%  Similarity=0.097  Sum_probs=132.4

Q ss_pred             cCCceeEeCCCCCceEEEEec---CCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeE
Q psy463            8 SSSSALWFSPSGNNLAYASFD---DNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRAR   84 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~   84 (790)
                      .+.+.+++|||+++|--+...   .+.+..|.+....+....+.    .....-.....+.-+++++.++-.+...+...
T Consensus        37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~----~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~  112 (345)
T PF10282_consen   37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN----SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVS  112 (345)
T ss_dssp             SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE----EEEESSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee----eeccCCCCcEEEEEecCCCEEEEEEccCCeEE
Confidence            445678899999866555442   34556666665533200000    00000000111223345555555555443333


Q ss_pred             EEEeeCCCCeeeEE---EeecC-----CCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCc
Q psy463           85 ITRCSINEGTCDVV---FSRDL-----DRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI  156 (790)
Q Consensus        85 ~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~  156 (790)
                      +...+.. |.....   .....     .+......-...++|||+.++...-..            ..|++++++.....
T Consensus       113 v~~l~~~-g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~------------D~v~~~~~~~~~~~  179 (345)
T PF10282_consen  113 VFPLDDD-GSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGA------------DRVYVYDIDDDTGK  179 (345)
T ss_dssp             EEEECTT-SEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTT------------TEEEEEEE-TTS-T
T ss_pred             EEEccCC-cccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCC------------CEEEEEEEeCCCce
Confidence            3222222 433322   11110     000000111248899999887554322            27999988765310


Q ss_pred             cCC-cceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecC--CcccccCcCCcccccccccee
Q psy463          157 KDK-VPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLD--DQAGIKDKVPVPLTRGRFTVT  233 (790)
Q Consensus       157 ~~~-~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~lt~~~~~~~  233 (790)
                      -.. ....+..|..  -.-+.++++++  .+|+...          ....|.++++.  ++..+.++             
T Consensus       180 l~~~~~~~~~~G~G--PRh~~f~pdg~--~~Yv~~e----------~s~~v~v~~~~~~~g~~~~~~-------------  232 (345)
T PF10282_consen  180 LTPVDSIKVPPGSG--PRHLAFSPDGK--YAYVVNE----------LSNTVSVFDYDPSDGSLTEIQ-------------  232 (345)
T ss_dssp             EEEEEEEECSTTSS--EEEEEE-TTSS--EEEEEET----------TTTEEEEEEEETTTTEEEEEE-------------
T ss_pred             EEEeeccccccCCC--CcEEEEcCCcC--EEEEecC----------CCCcEEEEeecccCCceeEEE-------------
Confidence            000 0112222211  12235566555  5665542          12577777766  33211110             


Q ss_pred             ehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEE
Q psy463          234 EILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLL  313 (790)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~  313 (790)
                       ...-.+........-..+..||||++++.++|+.+.-.+|.++.++|..+.+-.......+   ...+.++|||++|+.
T Consensus       233 -~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~---Pr~~~~s~~g~~l~V  308 (345)
T PF10282_consen  233 -TISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKF---PRHFAFSPDGRYLYV  308 (345)
T ss_dssp             -EEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSS---EEEEEE-TTSSEEEE
T ss_pred             -EeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCC---ccEEEEeCCCCEEEE
Confidence             0111111112223567899999999999999998776677777777887766544321211   247889999999884


Q ss_pred             EEccccccCCCCCcCcccEEEEEEcCCCC
Q psy463          314 ILSHNQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                       +.   ..++      .-.+|.+|.++|.
T Consensus       309 -a~---~~s~------~v~vf~~d~~tG~  327 (345)
T PF10282_consen  309 -AN---QDSN------TVSVFDIDPDTGK  327 (345)
T ss_dssp             -EE---TTTT------EEEEEEEETTTTE
T ss_pred             -Ee---cCCC------eEEEEEEeCCCCc
Confidence             44   2344      3455566666665

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.62  E-value=4.6e-05  Score=80.00  Aligned_cols=253  Identities=12%  Similarity=0.115  Sum_probs=119.6

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce-------EEEEEEeeeccCCccEE
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF-------TVTEILAWDERENNPLL  186 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~-------~~~~~~~~~~~~~~~~~  186 (790)
                      -++|+||++++-.....+            ++.++|..+.+     ....+..+..       .+..+..  ...+. .+
T Consensus        83 i~~s~DG~~~~v~n~~~~------------~v~v~D~~tle-----~v~~I~~~~~~~~~~~~Rv~aIv~--s~~~~-~f  142 (369)
T PF02239_consen   83 IAVSPDGKYVYVANYEPG------------TVSVIDAETLE-----PVKTIPTGGMPVDGPESRVAAIVA--SPGRP-EF  142 (369)
T ss_dssp             EEE--TTTEEEEEEEETT------------EEEEEETTT-------EEEEEE--EE-TTTS---EEEEEE---SSSS-EE
T ss_pred             EEEcCCCCEEEEEecCCC------------ceeEecccccc-----ceeecccccccccccCCCceeEEe--cCCCC-EE
Confidence            377999999877665444            89999987763     2333332211       1122222  11111 22


Q ss_pred             EEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEec
Q psy463          187 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNR  266 (790)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r  266 (790)
                      ++...          ...+||++|....+.      ...+.               ...........|+||||++.....
T Consensus       143 Vv~lk----------d~~~I~vVdy~d~~~------~~~~~---------------i~~g~~~~D~~~dpdgry~~va~~  191 (369)
T PF02239_consen  143 VVNLK----------DTGEIWVVDYSDPKN------LKVTT---------------IKVGRFPHDGGFDPDGRYFLVAAN  191 (369)
T ss_dssp             EEEET----------TTTEEEEEETTTSSC------EEEEE---------------EE--TTEEEEEE-TTSSEEEEEEG
T ss_pred             EEEEc----------cCCeEEEEEeccccc------cceee---------------ecccccccccccCcccceeeeccc
Confidence            22221          226999999776431      11110               023344567899999995544433


Q ss_pred             cCcceEEEEEECCCCceeEEEEEeCC------CcccccCCceeEccCCCEEEE--EEccccccCCCCCcCcccEEEEEEc
Q psy463          267 VQNRARITRCSINEGTCDVVFSRDLD------RGWFEPFDHLRFSSDGKKMLL--ILSHNQESDGSTPVDSWDHLTFIDL  338 (790)
Q Consensus       267 ~~~~~~i~~~~~~~g~~~~l~~~~~~------~~~~~~~~~~~~spDg~~i~~--~~~~~~~~~g~~~~~~~~~l~~~d~  338 (790)
                      ..+  .+.++|.++++...+......      .+|.++...+.|+..+.....  ....  +.-......++..+-.+++
T Consensus       192 ~sn--~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~--~~v~v~d~~~wkvv~~I~~  267 (369)
T PF02239_consen  192 GSN--KIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGT--DPVSVHDDYAWKVVKTIPT  267 (369)
T ss_dssp             GGT--EEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE----TTT-STTTBTSEEEEEE-
T ss_pred             ccc--eeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccC--CccccchhhcCeEEEEEEC
Confidence            333  589999988877655443111      113334445666554432111  1110  0000000001223333332


Q ss_pred             CCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecccccCCCcccEEE
Q psy463          339 DDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDLLTSANQKCSYSG  417 (790)
Q Consensus       339 ~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~  417 (790)
                      .++                .  .++..+||++++++....+ +....|.+++..+  -+ ..++...      .......
T Consensus       268 ~G~----------------g--lFi~thP~s~~vwvd~~~~-~~~~~v~viD~~t--l~~~~~i~~~------~~~~~~h  320 (369)
T PF02239_consen  268 QGG----------------G--LFIKTHPDSRYVWVDTFLN-PDADTVQVIDKKT--LKVVKTITPG------PGKRVVH  320 (369)
T ss_dssp             SSS----------------S----EE--TT-SEEEEE-TT--SSHT-EEEEECCG--TEEEE-HHHH------HT--EEE
T ss_pred             CCC----------------c--ceeecCCCCccEEeeccCC-CCCceEEEEECcC--cceeEEEecc------CCCcEec
Confidence            211                1  1256789999998874332 2246888898866  22 2223221      1123677


Q ss_pred             EEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          418 ATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       418 ~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      +.|++||+.++++.-..+ ..|.++|..+.++
T Consensus       321 ~ef~~dG~~v~vS~~~~~-~~i~v~D~~Tl~~  351 (369)
T PF02239_consen  321 MEFNPDGKEVWVSVWDGN-GAIVVYDAKTLKE  351 (369)
T ss_dssp             EEE-TTSSEEEEEEE--T-TEEEEEETTTTEE
T ss_pred             cEECCCCCEEEEEEecCC-CEEEEEECCCcEE
Confidence            899999999988765443 3899999887543

...

>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.62  E-value=4.3e-07  Score=85.17  Aligned_cols=60  Identities=15%  Similarity=0.137  Sum_probs=48.3

Q ss_pred             ccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          722 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       722 ~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      .+ .||+.++.|++|..|..++...+.+..+   ...++.+|+| ||++.. ..+++...|.+.+.
T Consensus       174 pl-~~pi~~~~G~~D~~vs~~~~~~W~~~t~---~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~  234 (244)
T COG3208         174 PL-ACPIHAFGGEKDHEVSRDELGAWREHTK---GDFTLRVFDG-GHFFLNQQREEVLARLEQHLA  234 (244)
T ss_pred             Cc-CcceEEeccCcchhccHHHHHHHHHhhc---CCceEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence            45 8999999999999988777666655544   3579999998 999988 77788888887775

>KOG0315|consensus

Probab=98.61  E-value=1.4e-05  Score=74.00  Aligned_cols=247  Identities=13%  Similarity=0.150  Sum_probs=134.4

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      ..++..+||++.||-...  -.+.+|.+..  +...++    .....+.-.+..+++.-++   .|+..+.-.-.+.+++
T Consensus        43 VNrLeiTpdk~~LAaa~~--qhvRlyD~~S--~np~Pv----~t~e~h~kNVtaVgF~~dg---rWMyTgseDgt~kIWd  111 (311)
T KOG0315|consen   43 VNRLEITPDKKDLAAAGN--QHVRLYDLNS--NNPNPV----ATFEGHTKNVTAVGFQCDG---RWMYTGSEDGTVKIWD  111 (311)
T ss_pred             eeeEEEcCCcchhhhccC--CeeEEEEccC--CCCCce----eEEeccCCceEEEEEeecC---eEEEecCCCceEEEEe
Confidence            356789999999996543  3345555444  321111    1122222234444543333   3565555556667777


Q ss_pred             CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463           90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF  169 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~  169 (790)
                      .+.-.|++.+...+.=.      .-...|.-.. +|+.+..+            +|++.|+.+..     -..++...+-
T Consensus       112 lR~~~~qR~~~~~spVn------~vvlhpnQte-Lis~dqsg------------~irvWDl~~~~-----c~~~liPe~~  167 (311)
T KOG0315|consen  112 LRSLSCQRNYQHNSPVN------TVVLHPNQTE-LISGDQSG------------NIRVWDLGENS-----CTHELIPEDD  167 (311)
T ss_pred             ccCcccchhccCCCCcc------eEEecCCcce-EEeecCCC------------cEEEEEccCCc-----cccccCCCCC
Confidence            77777777666532111      1133444444 33443333            89999997762     2445555544


Q ss_pred             EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccC-cCCccccccccceeehhhcccCCCCCCCE
Q psy463          170 TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD-KVPVPLTRGRFTVTEILAWDEKENNVEPV  248 (790)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~~~~~~~  248 (790)
                      ....-+...+++..  +.. .+          ..+..|+.++-+++..-. .+..++.                 ...++
T Consensus       168 ~~i~sl~v~~dgsm--l~a-~n----------nkG~cyvW~l~~~~~~s~l~P~~k~~-----------------ah~~~  217 (311)
T KOG0315|consen  168 TSIQSLTVMPDGSM--LAA-AN----------NKGNCYVWRLLNHQTASELEPVHKFQ-----------------AHNGH  217 (311)
T ss_pred             cceeeEEEcCCCcE--EEE-ec----------CCccEEEEEccCCCccccceEhhhee-----------------cccce
Confidence            55555566666652  221 11          125667666655432111 1112222                 56788


Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCC-ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEG-TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      +..-.+|||+|+++..+.+..   +++.+.++- +....+  .+...|..   +-.||.||.+|+ +++    .++    
T Consensus       218 il~C~lSPd~k~lat~ssdkt---v~iwn~~~~~kle~~l--~gh~rWvW---dc~FS~dg~Ylv-Tas----sd~----  280 (311)
T KOG0315|consen  218 ILRCLLSPDVKYLATCSSDKT---VKIWNTDDFFKLELVL--TGHQRWVW---DCAFSADGEYLV-TAS----SDH----  280 (311)
T ss_pred             EEEEEECCCCcEEEeecCCce---EEEEecCCceeeEEEe--ecCCceEE---eeeeccCccEEE-ecC----CCC----
Confidence            899999999996655544332   677766665 222222  22245654   689999999887 665    344    


Q ss_pred             CcccEEEEEEcCCCC
Q psy463          328 DSWDHLTFIDLDDQA  342 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~  342 (790)
                        .  ..++++..++
T Consensus       281 --~--~rlW~~~~~k  291 (311)
T KOG0315|consen  281 --T--ARLWDLSAGK  291 (311)
T ss_pred             --c--eeecccccCc
Confidence              3  4455666665

>KOG2314|consensus

Probab=98.60  E-value=4.7e-05  Score=78.42  Aligned_cols=170  Identities=14%  Similarity=0.212  Sum_probs=97.9

Q ss_pred             EEEEEEccCCc-EEEEEeccCc-ceEEEEEECCCCce---eEEEEEeCCCcccccCCceeEccCCCEEEEEEcc-cccc-
Q psy463          249 LSRVNWANESV-VAAWVNRVQN-RARITRCSINEGTC---DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSH-NQES-  321 (790)
Q Consensus       249 ~~~~~wspDg~-~~~~~~r~~~-~~~i~~~~~~~g~~---~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~-~~~~-  321 (790)
                      +..+.|||-+. +++|+....+ ..++-++.+-+++.   +.|+...        .-..-|-..|++|.|-+.. .... 
T Consensus       349 Ir~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVs--------DckLhWQk~gdyLcvkvdR~tK~~~  420 (698)
T KOG2314|consen  349 IRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVS--------DCKLHWQKSGDYLCVKVDRHTKSKV  420 (698)
T ss_pred             ccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeee--------ccEEEeccCCcEEEEEEEeeccccc
Confidence            55789999999 7777765443 34566666665543   2334332        2257799999999876531 1011 


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                      .|.   ...-+|++++  ...    .....+.- ...+. .++|.|.|.+....+........+.|.+....  .++..+
T Consensus       421 ~g~---f~n~eIfrir--eKd----Ipve~vel-ke~vi-~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~--~~~~lV  487 (698)
T KOG2314|consen  421 KGQ---FSNLEIFRIR--EKD----IPVEVVEL-KESVI-AFAWEPHGDKFAVISGNTVKNTVSFYAVETNI--KKPSLV  487 (698)
T ss_pred             cce---EeeEEEEEee--ccC----CCceeeec-chhee-eeeeccCCCeEEEEEccccccceeEEEeecCC--Cchhhh
Confidence            121   1122444444  222    00111111 11223 38999999988877665222336777776544  444433


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      ..-      ..-....+.|||.|+++|...-......++.+|++
T Consensus       488 k~~------dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~  525 (698)
T KOG2314|consen  488 KEL------DKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTD  525 (698)
T ss_pred             hhh------cccccceEEEcCCCcEEEEEEecccccceEEEecc
Confidence            321      23355678999999999887665556778888765

>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes

Probab=98.60  E-value=2.3e-07  Score=93.37  Aligned_cols=114  Identities=18%  Similarity=0.081  Sum_probs=77.0

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ...|++|++||..+..  ...|...+...++...++.|+++|+++.....  +..+.. .. ....+++...++++.+..
T Consensus        34 ~~~p~vilIHG~~~~~--~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~~-~~-~~v~~~la~~l~~L~~~~  107 (275)
T cd00707          34 PSRPTRFIIHGWTSSG--EESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAVN-NT-RVVGAELAKFLDFLVDNT  107 (275)
T ss_pred             CCCCcEEEEcCCCCCC--CCcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHHH-hH-HHHHHHHHHHHHHHHHhc
Confidence            3458899999987763  23444334444565568999999998753221  111100 00 012356677788877632


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      + ++.+++.++||||||.++..++.+.+. +++.+++..|..
T Consensus       108 g-~~~~~i~lIGhSlGa~vAg~~a~~~~~-~v~~iv~LDPa~  147 (275)
T cd00707         108 G-LSLENVHLIGHSLGAHVAGFAGKRLNG-KLGRITGLDPAG  147 (275)
T ss_pred             C-CChHHEEEEEecHHHHHHHHHHHHhcC-ccceeEEecCCc
Confidence            3 567899999999999999999998875 788888887753

Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.

>KOG0286|consensus

Probab=98.60  E-value=2.9e-05  Score=73.60  Aligned_cols=159  Identities=11%  Similarity=0.120  Sum_probs=102.2

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEcc-CCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS-DGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-Dg~~i~~~~~~~~~~~  322 (790)
                      ...+|++.-.+.+|+.++..+.    ...+.+.|+++|+....+..-  .   +-.-...++| |++.++ ..+    -+
T Consensus       143 gHtgylScC~f~dD~~ilT~SG----D~TCalWDie~g~~~~~f~GH--~---gDV~slsl~p~~~ntFv-Sg~----cD  208 (343)
T KOG0286|consen  143 GHTGYLSCCRFLDDNHILTGSG----DMTCALWDIETGQQTQVFHGH--T---GDVMSLSLSPSDGNTFV-SGG----CD  208 (343)
T ss_pred             CccceeEEEEEcCCCceEecCC----CceEEEEEcccceEEEEecCC--c---ccEEEEecCCCCCCeEE-ecc----cc
Confidence            6778899999999998776543    334999999999887666521  1   1134678899 898776 554    33


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                      .        .-+++|+..+.     ..+....++.++.. +.|.|+|..++--+.++.   -+||-+..+-   +.....
T Consensus       209 ~--------~aklWD~R~~~-----c~qtF~ghesDINs-v~ffP~G~afatGSDD~t---cRlyDlRaD~---~~a~ys  268 (343)
T KOG0286|consen  209 K--------SAKLWDVRSGQ-----CVQTFEGHESDINS-VRFFPSGDAFATGSDDAT---CRLYDLRADQ---ELAVYS  268 (343)
T ss_pred             c--------ceeeeeccCcc-----eeEeecccccccce-EEEccCCCeeeecCCCce---eEEEeecCCc---EEeeec
Confidence            4        34667877665     13335555555554 789999985554444443   5676655432   222222


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                      .     ....+.+.++.||..|+.+...++..+   ..++|.
T Consensus       269 ~-----~~~~~gitSv~FS~SGRlLfagy~d~~---c~vWDt  302 (343)
T KOG0286|consen  269 H-----DSIICGITSVAFSKSGRLLFAGYDDFT---CNVWDT  302 (343)
T ss_pred             c-----CcccCCceeEEEcccccEEEeeecCCc---eeEeec
Confidence            2     124678899999999998866555544   556554

>KOG1446|consensus

Probab=98.60  E-value=4.2e-05  Score=73.57  Aligned_cols=150  Identities=19%  Similarity=0.195  Sum_probs=84.9

Q ss_pred             EEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCcc-ccccccceeehhhcccCCCCCCCEEE
Q psy463          172 TEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVEPVLS  250 (790)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~~~~~~  250 (790)
                      ..+.++||.+   ++|+.....          ..|-++|+..=.+.    |-+ +.-+              ........
T Consensus       143 ~pi~AfDp~G---LifA~~~~~----------~~IkLyD~Rs~dkg----PF~tf~i~--------------~~~~~ew~  191 (311)
T KOG1446|consen  143 RPIAAFDPEG---LIFALANGS----------ELIKLYDLRSFDKG----PFTTFSIT--------------DNDEAEWT  191 (311)
T ss_pred             CcceeECCCC---cEEEEecCC----------CeEEEEEecccCCC----CceeEccC--------------CCCcccee
Confidence            3567889887   777776532          26677776531100    211 1100              02234567


Q ss_pred             EEEEccCCcE-EEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          251 RVNWANESVV-AAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       251 ~~~wspDg~~-~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      .+.+|||||. +..++.+.    ++++|.-+|....-++.....+  ....+..|+|||+.|+ ..+    .+|      
T Consensus       192 ~l~FS~dGK~iLlsT~~s~----~~~lDAf~G~~~~tfs~~~~~~--~~~~~a~ftPds~Fvl-~gs----~dg------  254 (311)
T KOG1446|consen  192 DLEFSPDGKSILLSTNASF----IYLLDAFDGTVKSTFSGYPNAG--NLPLSATFTPDSKFVL-SGS----DDG------  254 (311)
T ss_pred             eeEEcCCCCEEEEEeCCCc----EEEEEccCCcEeeeEeeccCCC--CcceeEEECCCCcEEE-Eec----CCC------
Confidence            8999999994 44444333    9999999998654444321111  1124789999999665 444    566      


Q ss_pred             ccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                        .|.++++++|+     +...+..........+.|+|.  +..|.+..
T Consensus       255 --~i~vw~~~tg~-----~v~~~~~~~~~~~~~~~fnP~--~~mf~sa~  294 (311)
T KOG1446|consen  255 --TIHVWNLETGK-----KVAVLRGPNGGPVSCVRFNPR--YAMFVSAS  294 (311)
T ss_pred             --cEEEEEcCCCc-----EeeEecCCCCCCccccccCCc--eeeeeecC
Confidence              67888888876     132332211222233668774  44555544

>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]

Probab=98.59  E-value=1.7e-06  Score=83.89  Aligned_cols=131  Identities=21%  Similarity=0.159  Sum_probs=78.5

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHh---cCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD---NKDIVVAYIDGRNSALKGNTLKYAGYR  557 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~---~~G~~v~~~d~rG~~~~g~~~~~~~~~  557 (790)
                      .+..-.+++|+++.  +..++|++++.||--..+...   .......+.+   -...+++.+|+--.......+.     
T Consensus        80 ~~~~~vv~lppgy~--~~~k~pvl~~~DG~~~~~~g~---i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-----  149 (299)
T COG2382          80 SERRRVVYLPPGYN--PLEKYPVLYLQDGQDWFRSGR---IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-----  149 (299)
T ss_pred             cceeEEEEeCCCCC--ccccccEEEEeccHHHHhcCC---hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-----
Confidence            45666788899988  888999999999854332100   0011122222   1245677777653222111111     


Q ss_pred             cCCccchhHHH-HHHHHHHHhCCC-cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463          558 RLGTVEIYDQI-NVTRYLQENLPY-IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       558 ~~~~~~~~D~~-~~~~~l~~~~~~-~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                      ... .-...+. +.+-++.++++. -+..+-+++|.|+||.++++++.++|+ .|-++++.+|..++.
T Consensus       150 ~n~-~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe-~FG~V~s~Sps~~~~  215 (299)
T COG2382         150 CNE-AYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPE-RFGHVLSQSGSFWWT  215 (299)
T ss_pred             ccH-HHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCch-hhceeeccCCccccC
Confidence            000 0011111 223344444442 245678899999999999999999986 999999999987654

>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]

Probab=98.59  E-value=4.1e-06  Score=71.94  Aligned_cols=105  Identities=14%  Similarity=0.020  Sum_probs=58.6

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC--ChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL--KGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~--~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ..+|++.||.+..   .++-...-....++.+|+.|..+++.-...  .|.   ......-+ ..-.....++..+..  
T Consensus        14 ~~tilLaHGAGas---mdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~---rkPp~~~~-t~~~~~~~~~aql~~--   84 (213)
T COG3571          14 PVTILLAHGAGAS---MDSTSMTAVAAALARRGWLVARFEFPYMAARRTGR---RKPPPGSG-TLNPEYIVAIAQLRA--   84 (213)
T ss_pred             CEEEEEecCCCCC---CCCHHHHHHHHHHHhCceeEEEeecchhhhccccC---CCCcCccc-cCCHHHHHHHHHHHh--
Confidence            3467788987765   233333334455667999999998642111  110   00111111 112233444555554  


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEe
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISV  616 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~  616 (790)
                       ..+..+.++.|+||||-++.+++..-.- .+.++++.
T Consensus        85 -~l~~gpLi~GGkSmGGR~aSmvade~~A-~i~~L~cl  120 (213)
T COG3571          85 -GLAEGPLIIGGKSMGGRVASMVADELQA-PIDGLVCL  120 (213)
T ss_pred             -cccCCceeeccccccchHHHHHHHhhcC-CcceEEEe
Confidence             2455689999999999999888763322 24444443

>KOG0973|consensus

Probab=98.57  E-value=6.4e-06  Score=91.54  Aligned_cols=113  Identities=17%  Similarity=0.138  Sum_probs=68.1

Q ss_pred             eecCCceeEeCCCCCceEEEEecCCceeEEEecc------cCC---C-CCCCcCCCccccCCCCccccccCCCcceeEee
Q psy463            6 VLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPF------YGN---P-GHPSSQYTQAINLREPVLSRVNWANESVVAAW   75 (790)
Q Consensus         6 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~------~g~---~-~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~   75 (790)
                      ..+...-..|||||++||+-+. +.-..||....      .|.   . +++.......++-+...+.++.|++++..+.-
T Consensus        68 h~~sv~CVR~S~dG~~lAsGSD-D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS  146 (942)
T KOG0973|consen   68 HDGSVNCVRFSPDGSYLASGSD-DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVS  146 (942)
T ss_pred             ccCceeEEEECCCCCeEeeccC-cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEE
Confidence            4556677889999999999765 56677787762      211   1 22223344445556666778889886654322


Q ss_pred             eecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEe
Q psy463           76 VNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLIL  127 (790)
Q Consensus        76 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~  127 (790)
                      .   .....+-+++..++++..+...+..     .....+|.|=|++|+-.+
T Consensus       147 ~---s~DnsViiwn~~tF~~~~vl~~H~s-----~VKGvs~DP~Gky~ASqs  190 (942)
T KOG0973|consen  147 V---SLDNSVIIWNAKTFELLKVLRGHQS-----LVKGVSWDPIGKYFASQS  190 (942)
T ss_pred             e---cccceEEEEccccceeeeeeecccc-----cccceEECCccCeeeeec
Confidence            2   2334555677777766665554321     123457888888776444

>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function

Probab=98.56  E-value=2.8e-06  Score=84.85  Aligned_cols=256  Identities=14%  Similarity=0.172  Sum_probs=130.6

Q ss_pred             EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccch-HHHHHhcCCeEEEEEcCCCCCCChhh------hHh-
Q psy463          482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDW-NLYLADNKDIVVAYIDGRNSALKGNT------LKY-  553 (790)
Q Consensus       482 ~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~-~~~~~~~~G~~v~~~d~rG~~~~g~~------~~~-  553 (790)
                      +.+..++.|...+   .+..|+.|++.|.+....   .....+ ...++. .|+..+.+..+-.+.....      ... 
T Consensus        76 ~a~~~~~~P~~~~---~~~rp~~IhLagTGDh~f---~rR~~l~a~pLl~-~gi~s~~le~Pyyg~RkP~~Q~~s~l~~V  148 (348)
T PF09752_consen   76 TARFQLLLPKRWD---SPYRPVCIHLAGTGDHGF---WRRRRLMARPLLK-EGIASLILENPYYGQRKPKDQRRSSLRNV  148 (348)
T ss_pred             heEEEEEECCccc---cCCCceEEEecCCCccch---hhhhhhhhhHHHH-cCcceEEEecccccccChhHhhcccccch
Confidence            3455667787542   345799999988766522   111222 445555 5999887774432221100      000 


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhh
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERY  633 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~  633 (790)
                      ...-..|...+.+....+.|+.+ .++   .+++|.|.||||.+|..+++.+|. .+.++-+.++.+.    ...|.+..
T Consensus       149 sDl~~~g~~~i~E~~~Ll~Wl~~-~G~---~~~g~~G~SmGG~~A~laa~~~p~-pv~~vp~ls~~sA----s~vFt~Gv  219 (348)
T PF09752_consen  149 SDLFVMGRATILESRALLHWLER-EGY---GPLGLTGISMGGHMAALAASNWPR-PVALVPCLSWSSA----SVVFTEGV  219 (348)
T ss_pred             hHHHHHHhHHHHHHHHHHHHHHh-cCC---CceEEEEechhHhhHHhhhhcCCC-ceeEEEeecccCC----Ccchhhhh
Confidence            01112233557788888999988 463   699999999999999999998885 4444444443322    12222222


Q ss_pred             cCCCCccCchhh-hhhccccchhhhccCCcE-EEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh
Q psy463          634 MGLPTFEDNLEG-YKIAALNNKVDRIRDKQY-LLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY  711 (790)
Q Consensus       634 ~g~~~~~~~~~~-~~~~~~~~~~~~~~~~p~-l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  711 (790)
                      |.....|..... +......+....+...+. +..+.. .......++.++...+..  ..                   
T Consensus       220 ls~~i~W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Ea~~~m~~~md--~~-------------------  277 (348)
T PF09752_consen  220 LSNSINWDALEKQFEDTVYEEEISDIPAQNKSLPLDSM-EERRRDREALRFMRGVMD--SF-------------------  277 (348)
T ss_pred             hhcCCCHHHHHHHhcccchhhhhcccccCcccccchhh-ccccchHHHHHHHHHHHH--hh-------------------
Confidence            211100111100 000000000000000000 000000 001111122222111110  00                   


Q ss_pred             hhhhhhhhhhcc----CCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHH
Q psy463          712 KIAALNNKVDRI----RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFL  785 (790)
Q Consensus       712 ~~~~~~~~~~~i----~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl  785 (790)
                            .++.++    ....+.++.+++|..||..+...|.+.++..    ++.++++ ||.-..  +...+-+.|.+=|
T Consensus       278 ------T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGs----EvR~l~g-GHVsA~L~~q~~fR~AI~Daf  346 (348)
T PF09752_consen  278 ------THLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGS----EVRYLPG-GHVSAYLLHQEAFRQAIYDAF  346 (348)
T ss_pred             ------ccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCCC----eEEEecC-CcEEEeeechHHHHHHHHHHh
Confidence                  222333    1455788999999999999888888888754    6667887 997654  5666667776655


Q ss_pred             H
Q psy463          786 D  786 (790)
Q Consensus       786 ~  786 (790)
                      +
T Consensus       347 ~  347 (348)
T PF09752_consen  347 E  347 (348)
T ss_pred             h
Confidence            4

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.56  E-value=5e-05  Score=82.48  Aligned_cols=234  Identities=20%  Similarity=0.287  Sum_probs=131.3

Q ss_pred             ccccc-eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCC
Q psy463          164 LTRGR-FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE  242 (790)
Q Consensus       164 lt~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~  242 (790)
                      +..+. +.......++|+++. +.|.....++       ...+|+++|+++|+....    .+.                
T Consensus       117 l~~~~~~~~~~~~~~Spdg~~-la~~~s~~G~-------e~~~l~v~Dl~tg~~l~d----~i~----------------  168 (414)
T PF02897_consen  117 LAKDGGYVSLGGFSVSPDGKR-LAYSLSDGGS-------EWYTLRVFDLETGKFLPD----GIE----------------  168 (414)
T ss_dssp             GSTTSS-EEEEEEEETTTSSE-EEEEEEETTS-------SEEEEEEEETTTTEEEEE----EEE----------------
T ss_pred             hhccCceEEeeeeeECCCCCE-EEEEecCCCC-------ceEEEEEEECCCCcCcCC----ccc----------------
Confidence            44343 445555667777764 3333333222       236899999999853211    111                


Q ss_pred             CCCCCEEEEEEEccCCcEEEEEeccC--c------ceEEEEEECCCCcee--EEEEEeCCCcccccCCceeEccCCCEEE
Q psy463          243 NNVEPVLSRVNWANESVVAAWVNRVQ--N------RARITRCSINEGTCD--VVFSRDLDRGWFEPFDHLRFSSDGKKML  312 (790)
Q Consensus       243 ~~~~~~~~~~~wspDg~~~~~~~r~~--~------~~~i~~~~~~~g~~~--~l~~~~~~~~~~~~~~~~~~spDg~~i~  312 (790)
                         ......+.|++||+.++++..+.  .      ..++++..+.++...  .|+.+.....|   .-....|+||+.|+
T Consensus       169 ---~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~---~~~~~~s~d~~~l~  242 (414)
T PF02897_consen  169 ---NPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFW---FVSVSRSKDGRYLF  242 (414)
T ss_dssp             ---EEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTS---EEEEEE-TTSSEEE
T ss_pred             ---ccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcE---EEEEEecCcccEEE
Confidence               11122399999999666654433  2      567999999887654  66665432221   12578899999887


Q ss_pred             EEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463          313 LILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA  392 (790)
Q Consensus       313 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~  392 (790)
                      +...    ...     +..++|++++..+. ......+.|..........+..  .|..+|+.++.+.+ ...|+.++++
T Consensus       243 i~~~----~~~-----~~s~v~~~d~~~~~-~~~~~~~~l~~~~~~~~~~v~~--~~~~~yi~Tn~~a~-~~~l~~~~l~  309 (414)
T PF02897_consen  243 ISSS----SGT-----SESEVYLLDLDDGG-SPDAKPKLLSPREDGVEYYVDH--HGDRLYILTNDDAP-NGRLVAVDLA  309 (414)
T ss_dssp             EEEE----SSS-----SEEEEEEEECCCTT-TSS-SEEEEEESSSS-EEEEEE--ETTEEEEEE-TT-T-T-EEEEEETT
T ss_pred             EEEE----ccc-----cCCeEEEEeccccC-CCcCCcEEEeCCCCceEEEEEc--cCCEEEEeeCCCCC-CcEEEEeccc
Confidence            5554    222     03789999998640 0001255555433222222222  27789998887443 2789999997


Q ss_pred             CCCC-Ccc-eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC-CCeEEE
Q psy463          393 DPTA-TPE-CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT-GQRLLY  451 (790)
Q Consensus       393 ~~~~-~~~-~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~-~~~~~~  451 (790)
                      .... ..+ .+..       ......-..++..+.++++.....+.+.|.++++. +.....
T Consensus       310 ~~~~~~~~~~l~~-------~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~  364 (414)
T PF02897_consen  310 DPSPAEWWTVLIP-------EDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKESRE  364 (414)
T ss_dssp             STSGGGEEEEEE---------SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEEEE
T ss_pred             ccccccceeEEcC-------CCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEEee
Confidence            7311 112 2222       22223334456667889888888888899999998 554443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.55  E-value=6.1e-05  Score=79.03  Aligned_cols=252  Identities=9%  Similarity=0.033  Sum_probs=115.2

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEE
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITR   87 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~   87 (790)
                      +....+.+||||++|+-....++...+|.+...|.- .    ........ .....+.++++++.++-.+...+..  .+
T Consensus        35 ~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l-~----~~~~~~~~-~~p~~i~~~~~g~~l~v~~~~~~~v--~v  106 (330)
T PRK11028         35 GQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGAL-T----FAAESPLP-GSPTHISTDHQGRFLFSASYNANCV--SV  106 (330)
T ss_pred             CCCccEEECCCCCEEEEEECCCCcEEEEEECCCCce-E----EeeeecCC-CCceEEEECCCCCEEEEEEcCCCeE--EE
Confidence            345667899999988665554555555655422221 0    00000000 0112244555665544444333322  22


Q ss_pred             eeCC-CCeee-EEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccC--Cccee
Q psy463           88 CSIN-EGTCD-VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD--KVPVP  163 (790)
Q Consensus        88 ~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~--~~~~~  163 (790)
                      ++.. .+... .+.....    ...+....++|||+.++......+            .|+++++++......  .....
T Consensus       107 ~~~~~~g~~~~~~~~~~~----~~~~~~~~~~p~g~~l~v~~~~~~------------~v~v~d~~~~g~l~~~~~~~~~  170 (330)
T PRK11028        107 SPLDKDGIPVAPIQIIEG----LEGCHSANIDPDNRTLWVPCLKED------------RIRLFTLSDDGHLVAQEPAEVT  170 (330)
T ss_pred             EEECCCCCCCCceeeccC----CCcccEeEeCCCCCEEEEeeCCCC------------EEEEEEECCCCcccccCCCcee
Confidence            3222 12111 1111000    001122368999998876553322            899999875320000  00111


Q ss_pred             ccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCC--cccccCcCCccccccccceeehhhcccC
Q psy463          164 LTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDD--QAGIKDKVPVPLTRGRFTVTEILAWDEK  241 (790)
Q Consensus       164 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~lt~~~~~~~~~~~~~~~  241 (790)
                      +..|.. . .-..++++++  .+|+... .         ...|.+++++.  ++.+.+   ..+.           ..|.
T Consensus       171 ~~~g~~-p-~~~~~~pdg~--~lyv~~~-~---------~~~v~v~~~~~~~~~~~~~---~~~~-----------~~p~  222 (330)
T PRK11028        171 TVEGAG-P-RHMVFHPNQQ--YAYCVNE-L---------NSSVDVWQLKDPHGEIECV---QTLD-----------MMPA  222 (330)
T ss_pred             cCCCCC-C-ceEEECCCCC--EEEEEec-C---------CCEEEEEEEeCCCCCEEEE---EEEe-----------cCCC
Confidence            212211 1 1236666665  5555532 1         15777777653  221111   0000           0000


Q ss_pred             CCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          242 ENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       242 ~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      ......+-..+.++|||++++..++..+.-.++.++.+++..+.+-....  +.  ....+.++|||++|+ .++
T Consensus       223 ~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~--~~--~p~~~~~~~dg~~l~-va~  292 (330)
T PRK11028        223 DFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT--ET--QPRGFNIDHSGKYLI-AAG  292 (330)
T ss_pred             cCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec--cc--cCCceEECCCCCEEE-EEE
Confidence            00112233457899999987777776554444444444443332222211  11  134789999999988 444

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.55  E-value=0.00026  Score=74.24  Aligned_cols=124  Identities=10%  Similarity=0.114  Sum_probs=63.7

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCC-Ccc--cccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLD-RGW--FEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~-~~~--~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      ..+.|+|||++++.++...+.-.+|.++..+++.+.+...... ...  ........++|||+.++ +..   +..    
T Consensus       178 ~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~ly-v~~---~~~----  249 (330)
T PRK11028        178 RHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLY-ACD---RTA----  249 (330)
T ss_pred             ceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEE-Eec---CCC----
Confidence            4679999999888877655544444444334544332221100 000  00012477899999887 443   122    


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccc---cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPL---TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~l---t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                          ..|.+++++....    ..+.+   ..+. ... .+.++|||++||......  ..-.+|.++..+
T Consensus       250 ----~~I~v~~i~~~~~----~~~~~~~~~~~~-~p~-~~~~~~dg~~l~va~~~~--~~v~v~~~~~~~  307 (330)
T PRK11028        250 ----SLISVFSVSEDGS----VLSFEGHQPTET-QPR-GFNIDHSGKYLIAAGQKS--HHISVYEIDGET  307 (330)
T ss_pred             ----CeEEEEEEeCCCC----eEEEeEEEeccc-cCC-ceEECCCCCEEEEEEccC--CcEEEEEEcCCC
Confidence                2566666643210    01111   1111 112 368999999888765432  125666665443

>KOG0273|consensus

Probab=98.54  E-value=5.1e-05  Score=76.61  Aligned_cols=264  Identities=15%  Similarity=0.175  Sum_probs=139.8

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCc--cccccCCCcceeEeeeecccceeEEE
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPV--LSRVNWANESVVAAWVNRVQNRARIT   86 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~w~~~~~~~~~~~r~~~~~~~~   86 (790)
                      ....+.|+-||..||+-+. +|...||  ...|+.         ...+..++  +..+.|...+..++-..-.   -...
T Consensus       237 dVT~L~Wn~~G~~LatG~~-~G~~riw--~~~G~l---------~~tl~~HkgPI~slKWnk~G~yilS~~vD---~tti  301 (524)
T KOG0273|consen  237 DVTSLDWNNDGTLLATGSE-DGEARIW--NKDGNL---------ISTLGQHKGPIFSLKWNKKGTYILSGGVD---GTTI  301 (524)
T ss_pred             CcceEEecCCCCeEEEeec-CcEEEEE--ecCchh---------hhhhhccCCceEEEEEcCCCCEEEeccCC---ccEE
Confidence            3478999999999998664 5555555  445553         22333333  2345666555444332222   2234


Q ss_pred             EeeCCCCeeeEEEeecCCC----CccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcce
Q psy463           87 RCSINEGTCDVVFSRDLDR----GWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  162 (790)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  162 (790)
                      ++++.+|.+...+...+..    -|........-++||                       .|+++.++...+    ..+
T Consensus       302 lwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~-----------------------~i~V~kv~~~~P----~~t  354 (524)
T KOG0273|consen  302 LWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDG-----------------------CIHVCKVGEDRP----VKT  354 (524)
T ss_pred             EEeccCceEEEeeeeccCCccceEEecCceEeecCCCc-----------------------eEEEEEecCCCc----cee
Confidence            5666666666555543322    243221112223333                       344444433321    122


Q ss_pred             eccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCC
Q psy463          163 PLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE  242 (790)
Q Consensus       163 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~  242 (790)
                       +..+.. -.+.+.|++.+.   +..+.+.   ..+     -.||.+.-.+-       ...|.                
T Consensus       355 -~~GH~g-~V~alk~n~tg~---LLaS~Sd---D~T-----lkiWs~~~~~~-------~~~l~----------------  398 (524)
T KOG0273|consen  355 -FIGHHG-EVNALKWNPTGS---LLASCSD---DGT-----LKIWSMGQSNS-------VHDLQ----------------  398 (524)
T ss_pred             -eecccC-ceEEEEECCCCc---eEEEecC---CCe-----eEeeecCCCcc-------hhhhh----------------
Confidence             222222 334457888764   3333321   111     35665432221       11121                


Q ss_pred             CCCCCEEEEEEEccCCc---------EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEE
Q psy463          243 NNVEPVLSRVNWANESV---------VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLL  313 (790)
Q Consensus       243 ~~~~~~~~~~~wspDg~---------~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~  313 (790)
                       .....+..+.|||+|.         .+++...+   ..+.++|+..|.+.-.+..-.     +++...+|||||++++ 
T Consensus       399 -~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~d---stV~lwdv~~gv~i~~f~kH~-----~pVysvafS~~g~ylA-  468 (524)
T KOG0273|consen  399 -AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFD---STVKLWDVESGVPIHTLMKHQ-----EPVYSVAFSPNGRYLA-  468 (524)
T ss_pred             -hhccceeeEeecCCCCccCCCcCCceEEEeecC---CeEEEEEccCCceeEeeccCC-----CceEEEEecCCCcEEE-
Confidence             3344567889999885         23333322   237888888887765442211     2466899999999998 


Q ss_pred             EEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCC
Q psy463          314 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQG  379 (790)
Q Consensus       314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~  379 (790)
                      +.+    .+|        -|..++..+++     ..+....+ ..+. .+.|+.+|.+|.....++
T Consensus       469 sGs----~dg--------~V~iws~~~~~-----l~~s~~~~-~~If-el~Wn~~G~kl~~~~sd~  515 (524)
T KOG0273|consen  469 SGS----LDG--------CVHIWSTKTGK-----LVKSYQGT-GGIF-ELCWNAAGDKLGACASDG  515 (524)
T ss_pred             ecC----CCC--------eeEeccccchh-----eeEeecCC-CeEE-EEEEcCCCCEEEEEecCC
Confidence            555    556        45666766666     23334433 2333 489999999887777664

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=98.54  E-value=6e-05  Score=76.74  Aligned_cols=237  Identities=16%  Similarity=0.165  Sum_probs=136.6

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...|+|+|+.|+....             .+.+.++++.++.     ....+......+ .-..|.++++  .++.... 
T Consensus        14 ~~~~~~~~~~l~~~~~-------------~g~i~i~~~~~~~-----~~~~~~~~~~~i-~~~~~~~~~~--~l~~~~~-   71 (289)
T cd00200          14 CVAFSPDGKLLATGSG-------------DGTIKVWDLETGE-----LLRTLKGHTGPV-RDVAASADGT--YLASGSS-   71 (289)
T ss_pred             EEEEcCCCCEEEEeec-------------CcEEEEEEeeCCC-----cEEEEecCCcce-eEEEECCCCC--EEEEEcC-
Confidence            3578999998876542             1278888877653     223333322222 2345555543  2332221 


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                                ...|+++++.+++.     ...+.                 .....+..+.|+|++++++.....   ..
T Consensus        72 ----------~~~i~i~~~~~~~~-----~~~~~-----------------~~~~~i~~~~~~~~~~~~~~~~~~---~~  116 (289)
T cd00200          72 ----------DKTIRLWDLETGEC-----VRTLT-----------------GHTSYVSSVAFSPDGRILSSSSRD---KT  116 (289)
T ss_pred             ----------CCeEEEEEcCcccc-----eEEEe-----------------ccCCcEEEEEEcCCCCEEEEecCC---Ce
Confidence                      25788888876532     22222                 334467889999998866555422   23


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      +.++++.+++........  .   .......|+|+++.++ ...    .+|        .|.++|+.+++     ....+
T Consensus       117 i~~~~~~~~~~~~~~~~~--~---~~i~~~~~~~~~~~l~-~~~----~~~--------~i~i~d~~~~~-----~~~~~  173 (289)
T cd00200         117 IKVWDVETGKCLTTLRGH--T---DWVNSVAFSPDGTFVA-SSS----QDG--------TIKLWDLRTGK-----CVATL  173 (289)
T ss_pred             EEEEECCCcEEEEEeccC--C---CcEEEEEEcCcCCEEE-EEc----CCC--------cEEEEEccccc-----cceeE
Confidence            888888866654444311  1   1144789999987665 333    345        68889987665     13333


Q ss_pred             cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          353 TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      ......+.. +.|+|+++.+++.+..     ..+...++..  ++. ..+..       ....+..+.|++++.+++...
T Consensus       174 ~~~~~~i~~-~~~~~~~~~l~~~~~~-----~~i~i~d~~~--~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~  238 (289)
T cd00200         174 TGHTGEVNS-VAFSPDGEKLLSSSSD-----GTIKLWDLST--GKCLGTLRG-------HENGVNSVAFSPDGYLLASGS  238 (289)
T ss_pred             ecCccccce-EEECCCcCEEEEecCC-----CcEEEEECCC--Cceecchhh-------cCCceEEEEEcCCCcEEEEEc
Confidence            333323343 7899999888887764     4566666654  222 12211       334677789999976665433


Q ss_pred             ecCCCCeEEEEecCCC
Q psy463          432 IGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       432 ~~~~~~~i~~~~~~~~  447 (790)
                         ....+++++...+
T Consensus       239 ---~~~~i~i~~~~~~  251 (289)
T cd00200         239 ---EDGTIRVWDLRTG  251 (289)
T ss_pred             ---CCCcEEEEEcCCc
Confidence               2345778777643

>KOG0272|consensus

Probab=98.54  E-value=7.5e-06  Score=81.34  Aligned_cols=149  Identities=11%  Similarity=0.105  Sum_probs=92.7

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      +....+...+|-|||.++..-.-+. .  -.+.|+.+|.+...+..-     .....+..|||+|-.|+ +.+    .++
T Consensus       301 GHs~~v~~iaf~~DGSL~~tGGlD~-~--~RvWDlRtgr~im~L~gH-----~k~I~~V~fsPNGy~lA-Tgs----~Dn  367 (459)
T KOG0272|consen  301 GHSKGVFSIAFQPDGSLAATGGLDS-L--GRVWDLRTGRCIMFLAGH-----IKEILSVAFSPNGYHLA-TGS----SDN  367 (459)
T ss_pred             ccccccceeEecCCCceeeccCccc-h--hheeecccCcEEEEeccc-----ccceeeEeECCCceEEe-ecC----CCC
Confidence            4556788999999999766533221 1  345678889887666431     12355899999999888 665    333


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                              ..-++|+....     ....+..+...|.. +.++|++.+...++....  ..+||.-.  +  +.  ++  
T Consensus       368 --------t~kVWDLR~r~-----~ly~ipAH~nlVS~-Vk~~p~~g~fL~TasyD~--t~kiWs~~--~--~~--~~--  423 (459)
T KOG0272|consen  368 --------TCKVWDLRMRS-----ELYTIPAHSNLVSQ-VKYSPQEGYFLVTASYDN--TVKIWSTR--T--WS--PL--  423 (459)
T ss_pred             --------cEEEeeecccc-----cceecccccchhhh-eEecccCCeEEEEcccCc--ceeeecCC--C--cc--cc--
Confidence                    45667776544     13344444444444 788986665555554422  26666432  1  11  11  


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                        ..+++...-+.++.+|+|+.+|+-+.
T Consensus       424 --ksLaGHe~kV~s~Dis~d~~~i~t~s  449 (459)
T KOG0272|consen  424 --KSLAGHEGKVISLDISPDSQAIATSS  449 (459)
T ss_pred             --hhhcCCccceEEEEeccCCceEEEec
Confidence              12344777889999999999887653

>KOG2055|consensus

Probab=98.53  E-value=1.7e-05  Score=79.84  Aligned_cols=233  Identities=15%  Similarity=0.167  Sum_probs=133.6

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...|+|+|+..+|.+.++.            -+|.+|+.+.+..  ++....+.. ...+....+.++++ -|.+..   
T Consensus       262 ~a~f~p~G~~~i~~s~rrk------------y~ysyDle~ak~~--k~~~~~g~e-~~~~e~FeVShd~~-fia~~G---  322 (514)
T KOG2055|consen  262 KAEFAPNGHSVIFTSGRRK------------YLYSYDLETAKVT--KLKPPYGVE-EKSMERFEVSHDSN-FIAIAG---  322 (514)
T ss_pred             eeeecCCCceEEEecccce------------EEEEeeccccccc--cccCCCCcc-cchhheeEecCCCC-eEEEcc---
Confidence            3588999997777765443            6899999877521  222211111 12222333344443 122222   


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcce
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRA  271 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~  271 (790)
                               ..++|+++...+++-     ...+                  .-++.+..+.||.||+ +++....+    
T Consensus       323 ---------~~G~I~lLhakT~el-----i~s~------------------KieG~v~~~~fsSdsk~l~~~~~~G----  366 (514)
T KOG2055|consen  323 ---------NNGHIHLLHAKTKEL-----ITSF------------------KIEGVVSDFTFSSDSKELLASGGTG----  366 (514)
T ss_pred             ---------cCceEEeehhhhhhh-----hhee------------------eeccEEeeEEEecCCcEEEEEcCCc----
Confidence                     237999998877652     0011                  3467789999999999 44443333    


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEc--CCCCcccCCCc
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL--DDQAGIKDKVP  349 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~--~~~~~~~~~~~  349 (790)
                      ++|+.|+....|...+..++.-   . -.++..|++|.+++ +.+    ..|      .-+||-.+-  .++.      +
T Consensus       367 eV~v~nl~~~~~~~rf~D~G~v---~-gts~~~S~ng~ylA-~GS----~~G------iVNIYd~~s~~~s~~------P  425 (514)
T KOG2055|consen  367 EVYVWNLRQNSCLHRFVDDGSV---H-GTSLCISLNGSYLA-TGS----DSG------IVNIYDGNSCFASTN------P  425 (514)
T ss_pred             eEEEEecCCcceEEEEeecCcc---c-eeeeeecCCCceEE-ecc----Ccc------eEEEeccchhhccCC------C
Confidence            4999999988777666554321   1 23678899999887 666    567      555554331  1222      4


Q ss_pred             ccccCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcE
Q psy463          350 VPLTRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSY  426 (790)
Q Consensus       350 ~~lt~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~  426 (790)
                      +++..-   ...+. .++|++|+..|+..+....   ..|..+.+.+.  .+  .++. -...+.-+.+..+.|||.|.+
T Consensus       426 kPik~~dNLtt~It-sl~Fn~d~qiLAiaS~~~k---nalrLVHvPS~--TV--FsNf-P~~n~~vg~vtc~aFSP~sG~  496 (514)
T KOG2055|consen  426 KPIKTVDNLTTAIT-SLQFNHDAQILAIASRVKK---NALRLVHVPSC--TV--FSNF-PTSNTKVGHVTCMAFSPNSGY  496 (514)
T ss_pred             Cchhhhhhhheeee-eeeeCcchhhhhhhhhccc---cceEEEeccce--ee--eccC-CCCCCcccceEEEEecCCCce
Confidence            444321   12333 4899999997777766522   34555554331  10  0000 000112346677999999999


Q ss_pred             EEEE
Q psy463          427 YVLS  430 (790)
Q Consensus       427 ~~~~  430 (790)
                      +++.
T Consensus       497 lAvG  500 (514)
T KOG2055|consen  497 LAVG  500 (514)
T ss_pred             EEee
Confidence            9875

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.52  E-value=4.3e-05  Score=78.06  Aligned_cols=337  Identities=13%  Similarity=0.115  Sum_probs=175.2

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeE-eeeecccc---e--
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVA-AWVNRVQN---R--   82 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~-~~~~r~~~---~--   82 (790)
                      ......|||-|+.|+....  .++++|..|..+-          .++.....+...++++.++.+ .|..+...   .  
T Consensus        34 p~~~~~~SP~G~~l~~~~~--~~V~~~~g~~~~~----------l~~~~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~  101 (561)
T COG5354          34 PVAYVSESPLGTYLFSEHA--AGVECWGGPSKAK----------LVRFRHPDVKYLDFSPNEKYLVTWSREPIIEPEIEI  101 (561)
T ss_pred             chhheeecCcchheehhhc--cceEEccccchhh----------eeeeecCCceecccCcccceeeeeccCCccChhhcc
Confidence            3456779999999986543  4566665555331          344444455566777777755 77655431   1  


Q ss_pred             ------eEEEEeeCCCCeeeEEEeecCCC--CccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcC
Q psy463           83 ------ARITRCSINEGTCDVVFSRDLDR--GWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA  154 (790)
Q Consensus        83 ------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~  154 (790)
                            -.+-+++..+|....-+......  +|    +...||-|.+..+....              ..|+++++ ++.
T Consensus       102 sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~W----p~~k~s~~D~y~ARvv~--------------~sl~i~e~-t~n  162 (561)
T COG5354         102 SPFTSKNNVFVWDIASGMIVFSFNGISQPYLGW----PVLKFSIDDKYVARVVG--------------SSLYIHEI-TDN  162 (561)
T ss_pred             CCccccCceeEEeccCceeEeeccccCCccccc----ceeeeeecchhhhhhcc--------------CeEEEEec-CCc
Confidence                  13445566666544433333222  34    12478888888776541              26788876 332


Q ss_pred             CccCCcceeccccceEEEEEEeeeccCCcc-EEEEecccCCCCCCCccccceeEEEecCCcccccCcCCcccccccccee
Q psy463          155 GIKDKVPVPLTRGRFTVTEILAWDERENNP-LLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT  233 (790)
Q Consensus       155 ~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~  233 (790)
                      ..... ...|.   .+-+.-..|.|.+++. +.|..---.+.     +..-.||.+...+-       .++-+       
T Consensus       163 ~~~~p-~~~lr---~~gi~dFsisP~~n~~~la~~tPEk~~k-----pa~~~i~sIp~~s~-------l~tk~-------  219 (561)
T COG5354         163 IEEHP-FKNLR---PVGILDFSISPEGNHDELAYWTPEKLNK-----PAMVRILSIPKNSV-------LVTKN-------  219 (561)
T ss_pred             cccCc-hhhcc---ccceeeEEecCCCCCceEEEEccccCCC-----CcEEEEEEccCCCe-------eeeee-------
Confidence            11000 11111   1111223455553332 23333211111     22245666552221       11111       


Q ss_pred             ehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccC--c-----ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEc
Q psy463          234 EILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQ--N-----RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFS  305 (790)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~--~-----~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~s  305 (790)
                                -....-..+.|-+.|+ ++..+.+.-  +     ...||+|+.....++......      ++..++.|+
T Consensus       220 ----------lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~------~pVhdf~W~  283 (561)
T COG5354         220 ----------LFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLK------DPVHDFTWE  283 (561)
T ss_pred             ----------eEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceecccc------ccceeeeec
Confidence                      1122235788999999 444333321  1     257899998865555432211      247799999


Q ss_pred             cCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEE
Q psy463          306 SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQH  385 (790)
Q Consensus       306 pDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~  385 (790)
                      |++++++++..-   .        ...+-..|+.++-      .-.+....   ..-+.|||.++++++..-+.-  ...
T Consensus       284 p~S~~F~vi~g~---~--------pa~~s~~~lr~Nl------~~~~Pe~~---rNT~~fsp~~r~il~agF~nl--~gn  341 (561)
T COG5354         284 PLSSRFAVISGY---M--------PASVSVFDLRGNL------RFYFPEQK---RNTIFFSPHERYILFAGFDNL--QGN  341 (561)
T ss_pred             ccCCceeEEecc---c--------ccceeecccccce------EEecCCcc---cccccccCcccEEEEecCCcc--ccc
Confidence            999999965531   1        1234455655542      11111111   112568999999988776622  245


Q ss_pred             EEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC---CCeEEEEecCC
Q psy463          386 MYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG---IPEIMLFDKTG  446 (790)
Q Consensus       386 l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~---~~~i~~~~~~~  446 (790)
                      +-.++..+   +-.+++..      ..-+.....|||||+++.....++-   -..+.++|..+
T Consensus       342 i~i~~~~~---rf~~~~~~------~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g  396 (561)
T COG5354         342 IEIFDPAG---RFKVAGAF------NGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG  396 (561)
T ss_pred             eEEeccCC---ceEEEEEe------ecCCceEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence            55555554   44555432      2234455679999998877766554   22355555544

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.52  E-value=4.4e-05  Score=78.23  Aligned_cols=121  Identities=10%  Similarity=0.254  Sum_probs=71.7

Q ss_pred             EEEcc-CCcEEEEEeccCcceEEEEEECCCCceeE-----EEE-EeCCCcccc-cCCceeEccCCCEEEEEEccccc---
Q psy463          252 VNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDV-----VFS-RDLDRGWFE-PFDHLRFSSDGKKMLLILSHNQE---  320 (790)
Q Consensus       252 ~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~-----l~~-~~~~~~~~~-~~~~~~~spDg~~i~~~~~~~~~---  320 (790)
                      |.+++ ||++++.+..+    .++.+|+.+.....     +.. .+...+|.- .....+++|||+++++... ...   
T Consensus       199 P~~~~~dg~~~~vs~eG----~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~-~~~~~t  273 (352)
T TIGR02658       199 PAYSNKSGRLVWPTYTG----KIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLAD-QRAKWT  273 (352)
T ss_pred             CceEcCCCcEEEEecCC----eEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEec-CCcccc
Confidence            34466 88876666553    39999976543322     211 111234541 1124899999999985332 101   


Q ss_pred             -cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          321 -SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       321 -~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                       ..+      -.+|+++|+.+++     ....+.-+. ... .++++||++.++|.++...   ..|.++|..+
T Consensus       274 hk~~------~~~V~ViD~~t~k-----vi~~i~vG~-~~~-~iavS~Dgkp~lyvtn~~s---~~VsViD~~t  331 (352)
T TIGR02658       274 HKTA------SRFLFVVDAKTGK-----RLRKIELGH-EID-SINVSQDAKPLLYALSTGD---KTLYIFDAET  331 (352)
T ss_pred             ccCC------CCEEEEEECCCCe-----EEEEEeCCC-cee-eEEECCCCCeEEEEeCCCC---CcEEEEECcC
Confidence             122      3589999998887     234444343 222 3789999995556666533   5688888866

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.51  E-value=0.00019  Score=70.76  Aligned_cols=280  Identities=11%  Similarity=0.037  Sum_probs=142.8

Q ss_pred             eecCCceeEeCCCCCceEEEEec--CCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeeccccee
Q psy463            6 VLSSSSALWFSPSGNNLAYASFD--DNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRA   83 (790)
Q Consensus         6 ~~~~~~~~~wSPDG~~iaf~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~   83 (790)
                      .+++.+-++|+||+|.|--+-..  .+....|.+.-..|....+...+    +.-....-+.-+.+++.++-.+...+..
T Consensus        38 ~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~----~~g~~p~yvsvd~~g~~vf~AnY~~g~v  113 (346)
T COG2706          38 ELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQT----LPGSPPCYVSVDEDGRFVFVANYHSGSV  113 (346)
T ss_pred             ccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccc----cCCCCCeEEEECCCCCEEEEEEccCceE
Confidence            36777888999999977555444  34455555554334211000000    0000001122334554444444443333


Q ss_pred             EEEEeeCCCCeeeEEEeecCC--CCccccCC-----ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCc
Q psy463           84 RITRCSINEGTCDVVFSRDLD--RGWFEPFD-----HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI  156 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~  156 (790)
                      .+.-.... |....+......  .+.-++..     ...++|||+.|+-..-.-            ..|++++++.|.-.
T Consensus       114 ~v~p~~~d-G~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~------------Dri~~y~~~dg~L~  180 (346)
T COG2706         114 SVYPLQAD-GSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGT------------DRIFLYDLDDGKLT  180 (346)
T ss_pred             EEEEcccC-CccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCC------------ceEEEEEcccCccc
Confidence            33333332 333322111111  11111111     237899999877544222            28999998877411


Q ss_pred             cCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehh
Q psy463          157 KDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL  236 (790)
Q Consensus       157 ~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~  236 (790)
                      . .....+..|.. . .-+.+.|..+  +.|+-.- -+       ..=.+|-++-..|+-..++.              .
T Consensus       181 ~-~~~~~v~~G~G-P-RHi~FHpn~k--~aY~v~E-L~-------stV~v~~y~~~~g~~~~lQ~--------------i  233 (346)
T COG2706         181 P-ADPAEVKPGAG-P-RHIVFHPNGK--YAYLVNE-LN-------STVDVLEYNPAVGKFEELQT--------------I  233 (346)
T ss_pred             c-ccccccCCCCC-c-ceEEEcCCCc--EEEEEec-cC-------CEEEEEEEcCCCceEEEeee--------------e
Confidence            1 00112222211 0 1123444444  4444321 11       01233444433344333321              1


Q ss_pred             hcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          237 AWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       237 ~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      ...|++=........+..|||||+++.++|+.+.-.+|.++..+|..+.+........+   .+.+.++|+|+.|+ .+.
T Consensus       234 ~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~---PR~F~i~~~g~~Li-aa~  309 (346)
T COG2706         234 DTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQF---PRDFNINPSGRFLI-AAN  309 (346)
T ss_pred             ccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcC---CccceeCCCCCEEE-EEc
Confidence            11222213456678899999999999999999888899999999987655444322212   35789999999887 455


Q ss_pred             cccccCCCCCcCcccEEEEEEcCCCC
Q psy463          317 HNQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       317 ~~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                         +++.      .-.+|.+|-++|+
T Consensus       310 ---q~sd------~i~vf~~d~~TG~  326 (346)
T COG2706         310 ---QKSD------NITVFERDKETGR  326 (346)
T ss_pred             ---cCCC------cEEEEEEcCCCce
Confidence               3444      4567888877776

>KOG1407|consensus

Probab=98.50  E-value=2.4e-05  Score=72.90  Aligned_cols=102  Identities=14%  Similarity=0.204  Sum_probs=67.2

Q ss_pred             ceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCC
Q psy463          301 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS  380 (790)
Q Consensus       301 ~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~  380 (790)
                      -+.|+||||+++ +.+    .+-        .+-++|++.=-     ..+.++..+|.++. ++||-||++|+-.+.+  
T Consensus       194 cI~f~p~GryfA-~Gs----ADA--------lvSLWD~~ELi-----C~R~isRldwpVRT-lSFS~dg~~lASaSED--  252 (313)
T KOG1407|consen  194 CIEFDPDGRYFA-TGS----ADA--------LVSLWDVDELI-----CERCISRLDWPVRT-LSFSHDGRMLASASED--  252 (313)
T ss_pred             EEEECCCCceEe-ecc----ccc--------eeeccChhHhh-----hheeeccccCceEE-EEeccCcceeeccCcc--
Confidence            367999999988 554    222        34456654321     35678888898887 8999999988766554  


Q ss_pred             CceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463          381 PIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       381 ~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~  435 (790)
                         .-|=+....++ .+...+.+        .+..+.++|.|..-.++|.++..+
T Consensus       253 ---h~IDIA~vetG-d~~~eI~~--------~~~t~tVAWHPk~~LLAyA~ddk~  295 (313)
T KOG1407|consen  253 ---HFIDIAEVETG-DRVWEIPC--------EGPTFTVAWHPKRPLLAYACDDKD  295 (313)
T ss_pred             ---ceEEeEecccC-CeEEEeec--------cCCceeEEecCCCceeeEEecCCC
Confidence               22222333331 23334444        345677999999999999988776

>KOG0279|consensus

Probab=98.50  E-value=0.00042  Score=65.56  Aligned_cols=291  Identities=11%  Similarity=0.131  Sum_probs=162.1

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      ..+.+..|++..|.+.+.++...-+|.+..+..+   -....+..+.+.+.+..+.-++|+...+-.++   ...++++|
T Consensus        18 Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~---~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw---D~~lrlWD   91 (315)
T KOG0279|consen   18 VTALAIKIKNSDILVSASRDKTIIVWKLTSDDIK---YGVPVRRLTGHSHFVSDVVLSSDGNFALSASW---DGTLRLWD   91 (315)
T ss_pred             EEEEEeecCCCceEEEcccceEEEEEEeccCccc---cCceeeeeeccceEecceEEccCCceEEeccc---cceEEEEE
Confidence            3567788888889888887776666666554221   01122233445555555554445443333332   23567888


Q ss_pred             CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc-
Q psy463           90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR-  168 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~-  168 (790)
                      ..+|+++..+..+....     ...+||||.++|+--++             -+-|-+++.-++-      ...++.+. 
T Consensus        92 l~~g~~t~~f~GH~~dV-----lsva~s~dn~qivSGSr-------------DkTiklwnt~g~c------k~t~~~~~~  147 (315)
T KOG0279|consen   92 LATGESTRRFVGHTKDV-----LSVAFSTDNRQIVSGSR-------------DKTIKLWNTLGVC------KYTIHEDSH  147 (315)
T ss_pred             ecCCcEEEEEEecCCce-----EEEEecCCCceeecCCC-------------cceeeeeeecccE------EEEEecCCC
Confidence            88888777666543221     23488999999874221             1245555543331      22233332 


Q ss_pred             eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463          169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV  248 (790)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~  248 (790)
                      .+...-..|.|...+ -++++....          ..+-+.|+++-+.     ....-                 ...++
T Consensus       148 ~~WVscvrfsP~~~~-p~Ivs~s~D----------ktvKvWnl~~~~l-----~~~~~-----------------gh~~~  194 (315)
T KOG0279|consen  148 REWVSCVRFSPNESN-PIIVSASWD----------KTVKVWNLRNCQL-----RTTFI-----------------GHSGY  194 (315)
T ss_pred             cCcEEEEEEcCCCCC-cEEEEccCC----------ceEEEEccCCcch-----hhccc-----------------ccccc
Confidence            455555677777644 333433211          2444556665331     11111                 56789


Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      +..+..||||.+.+.-   +....+++.|++.+++  +...+.    .....+..|||+.-+|. .+.      +     
T Consensus       195 v~t~~vSpDGslcasG---gkdg~~~LwdL~~~k~--lysl~a----~~~v~sl~fspnrywL~-~at------~-----  253 (315)
T KOG0279|consen  195 VNTVTVSPDGSLCASG---GKDGEAMLWDLNEGKN--LYSLEA----FDIVNSLCFSPNRYWLC-AAT------A-----  253 (315)
T ss_pred             EEEEEECCCCCEEecC---CCCceEEEEEccCCce--eEeccC----CCeEeeEEecCCceeEe-ecc------C-----
Confidence            9999999999977663   3344599999988866  333221    12356899999976665 222      2     


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccC---CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTR---GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~  389 (790)
                        .-|-++|++++..+....+.....   .....--.++|++||.+|+-.-.++.   .++|.+
T Consensus       254 --~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~---irv~qv  312 (315)
T KOG0279|consen  254 --TSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNV---IRVWQV  312 (315)
T ss_pred             --CceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCc---EEEEEe
Confidence              237788888775211111111111   00111123899999998876655533   455544

>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3

Probab=98.49  E-value=4.1e-07  Score=85.19  Aligned_cols=117  Identities=21%  Similarity=0.200  Sum_probs=81.3

Q ss_pred             EEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccc
Q psy463          484 QVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVE  563 (790)
Q Consensus       484 ~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~  563 (790)
                      ...++.|.     ..+.||+|+++||..-.    ..|....... .++.||+|++|+.-....           .-+..+
T Consensus        34 pLlI~tP~-----~~G~yPVilF~HG~~l~----ns~Ys~lL~H-IASHGfIVVAPQl~~~~~-----------p~~~~E   92 (307)
T PF07224_consen   34 PLLIVTPS-----EAGTYPVILFLHGFNLY----NSFYSQLLAH-IASHGFIVVAPQLYTLFP-----------PDGQDE   92 (307)
T ss_pred             CeEEecCC-----cCCCccEEEEeechhhh----hHHHHHHHHH-HhhcCeEEEechhhcccC-----------CCchHH
Confidence            34555666     46789999999997543    2222223333 345999999999764211           112356


Q ss_pred             hhHHHHHHHHHHHhC----C---CcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCCC
Q psy463          564 IYDQINVTRYLQENL----P---YIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVTD  621 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~----~---~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~~  621 (790)
                      +++....++|+.+.+    +   ..+..+++++|||.||..|..+|..+. +-.|.++|.+.|+..
T Consensus        93 i~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G  158 (307)
T PF07224_consen   93 IKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG  158 (307)
T ss_pred             HHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence            788888899987642    1   246789999999999999999998763 335778888888754

1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process

>KOG2055|consensus

Probab=98.49  E-value=6.6e-06  Score=82.60  Aligned_cols=189  Identities=15%  Similarity=0.106  Sum_probs=117.5

Q ss_pred             cceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCc
Q psy463          203 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGT  282 (790)
Q Consensus       203 ~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~  282 (790)
                      +..+|.+|+++++..++..+..                   .....+..+..|||+++++...+.+   .|+++...+++
T Consensus       279 rky~ysyDle~ak~~k~~~~~g-------------------~e~~~~e~FeVShd~~fia~~G~~G---~I~lLhakT~e  336 (514)
T KOG2055|consen  279 RKYLYSYDLETAKVTKLKPPYG-------------------VEEKSMERFEVSHDSNFIAIAGNNG---HIHLLHAKTKE  336 (514)
T ss_pred             ceEEEEeeccccccccccCCCC-------------------cccchhheeEecCCCCeEEEcccCc---eEEeehhhhhh
Confidence            4789999999987655532211                   1234567889999999777665433   39999888887


Q ss_pred             eeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEE
Q psy463          283 CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI  362 (790)
Q Consensus       283 ~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~  362 (790)
                      .-.-+..++      ....+.||.||+.|+. .+    .+|        ++|++|+....     .....+.........
T Consensus       337 li~s~KieG------~v~~~~fsSdsk~l~~-~~----~~G--------eV~v~nl~~~~-----~~~rf~D~G~v~gts  392 (514)
T KOG2055|consen  337 LITSFKIEG------VVSDFTFSSDSKELLA-SG----GTG--------EVYVWNLRQNS-----CLHRFVDDGSVHGTS  392 (514)
T ss_pred             hhheeeecc------EEeeEEEecCCcEEEE-Ec----CCc--------eEEEEecCCcc-----eEEEEeecCccceee
Confidence            644444332      2568999999998873 33    345        89999998765     233333322112223


Q ss_pred             EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEE
Q psy463          363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLF  442 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~  442 (790)
                      ++.|++|.+++.-+..|-   .+||..+-.-....++++.. +..+   ...+.+..|++|++.++.. +......+.++
T Consensus       393 ~~~S~ng~ylA~GS~~Gi---VNIYd~~s~~~s~~PkPik~-~dNL---tt~Itsl~Fn~d~qiLAia-S~~~knalrLV  464 (514)
T KOG2055|consen  393 LCISLNGSYLATGSDSGI---VNIYDGNSCFASTNPKPIKT-VDNL---TTAITSLQFNHDAQILAIA-SRVKKNALRLV  464 (514)
T ss_pred             eeecCCCceEEeccCcce---EEEeccchhhccCCCCchhh-hhhh---heeeeeeeeCcchhhhhhh-hhccccceEEE
Confidence            778899996666555544   77887543211245555543 1111   2367889999999977554 33334556665


Q ss_pred             ecC
Q psy463          443 DKT  445 (790)
Q Consensus       443 ~~~  445 (790)
                      .+-
T Consensus       465 HvP  467 (514)
T KOG2055|consen  465 HVP  467 (514)
T ss_pred             ecc
Confidence            543

>COG0627 Predicted esterase [General function prediction only]

Probab=98.49  E-value=2.1e-06  Score=86.57  Aligned_cols=230  Identities=14%  Similarity=0.091  Sum_probs=126.8

Q ss_pred             CCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCC--------------CCCCChhhhHhhhhc--cCC
Q psy463          497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGR--------------NSALKGNTLKYAGYR--RLG  560 (790)
Q Consensus       497 ~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~r--------------G~~~~g~~~~~~~~~--~~~  560 (790)
                      ..++.|+++++||..+..  ..-+...-........|++++++|-.              |.+ .|.. .+....  ..+
T Consensus        50 m~~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~-~sfY-~d~~~~~~~~~  125 (316)
T COG0627          50 MGRDIPVLYLLSGLTCNE--PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGG-ASFY-SDWTQPPWASG  125 (316)
T ss_pred             cCCCCCEEEEeCCCCCCC--CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCc-ccee-cccccCccccC
Confidence            357789999999976652  11122223344455578888887422              211 1110 011111  111


Q ss_pred             ccchhHHHH--HHHHHHHhCCCcCC--CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc-----------
Q psy463          561 TVEIYDQIN--VTRYLQENLPYIDK--TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY-----------  625 (790)
Q Consensus       561 ~~~~~D~~~--~~~~l~~~~~~~d~--~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~-----------  625 (790)
                      ...+++++.  .-..+.+..+ ++.  .+.+|+||||||+-|+.+|.++| ++|+.+.+.+|+.+....           
T Consensus       126 ~~q~~tfl~~ELP~~~~~~f~-~~~~~~~~aI~G~SMGG~GAl~lA~~~p-d~f~~~sS~Sg~~~~s~~~~~~~~~~~~~  203 (316)
T COG0627         126 PYQWETFLTQELPALWEAAFP-ADGTGDGRAIAGHSMGGYGALKLALKHP-DRFKSASSFSGILSPSSPWGPTLAMGDPW  203 (316)
T ss_pred             ccchhHHHHhhhhHHHHHhcC-cccccCCceeEEEeccchhhhhhhhhCc-chhceeccccccccccccccccccccccc
Confidence            123333321  1112222233 444  38999999999999999999998 599999999998775411           


Q ss_pred             cccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463          626 DTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE  705 (790)
Q Consensus       626 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  705 (790)
                      .....+.++|...    ...+...++...++++                            ....-              
T Consensus       204 g~~~~~~~~G~~~----~~~w~~~D~~~~~~~l----------------------------~~~~~--------------  237 (316)
T COG0627         204 GGKAFNAMLGPDS----DPAWQENDPLSLIEKL----------------------------VANAN--------------  237 (316)
T ss_pred             cCccHHHhcCCCc----cccccccCchhHHHHh----------------------------hhccc--------------
Confidence            1111122222210    0011111111111111                            00000              


Q ss_pred             CcchhhhhhhhhhhhhccCCccEEEEecCCCcccc--hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHH
Q psy463          706 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH--FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLER  783 (790)
Q Consensus       706 ~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~  783 (790)
                              ..+... ... ..++++-+|..|....  ....+.+.+++..+|.+..+...++..|... .....+..+..
T Consensus       238 --------~~~~~~-~~~-~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~-~w~~~l~~~~~  306 (316)
T COG0627         238 --------TRIWVY-GGS-PPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWY-FWASQLADHLP  306 (316)
T ss_pred             --------ccceec-ccC-CCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHH-HHHHHHHHHHH
Confidence                    000011 112 5778888899997764  3447889999999999999888888889776 46677778888


Q ss_pred             HHHHhh
Q psy463          784 FLDSCF  789 (790)
Q Consensus       784 fl~~~l  789 (790)
                      |+...|
T Consensus       307 ~~a~~l  312 (316)
T COG0627         307 WLAGAL  312 (316)
T ss_pred             HHHHHh
Confidence            887665

>KOG2315|consensus

Probab=98.48  E-value=0.00016  Score=75.02  Aligned_cols=164  Identities=11%  Similarity=0.198  Sum_probs=100.2

Q ss_pred             EEEEEEccCCc-EEE--EEeccC------cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463          249 LSRVNWANESV-VAA--WVNRVQ------NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ  319 (790)
Q Consensus       249 ~~~~~wspDg~-~~~--~~~r~~------~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~  319 (790)
                      -....|.+-|. ++.  .++-+.      +...||.++.++..+..-....      ++.++..|||+|+.++++...  
T Consensus       220 kvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~------GPVhdv~W~~s~~EF~VvyGf--  291 (566)
T KOG2315|consen  220 KVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKE------GPVHDVTWSPSGREFAVVYGF--  291 (566)
T ss_pred             eeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCC------CCceEEEECCCCCEEEEEEec--
Confidence            35788999998 333  232221      2357999998844443222222      247799999999999865541  


Q ss_pred             ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463          320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE  399 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~  399 (790)
                         -      -..+-++|+.+.-      .-.+..+..   .-+-|+|-|+.|++.+-..-++...+|-+.  .    .+
T Consensus       292 ---M------PAkvtifnlr~~~------v~df~egpR---N~~~fnp~g~ii~lAGFGNL~G~mEvwDv~--n----~K  347 (566)
T KOG2315|consen  292 ---M------PAKVTIFNLRGKP------VFDFPEGPR---NTAFFNPHGNIILLAGFGNLPGDMEVWDVP--N----RK  347 (566)
T ss_pred             ---c------cceEEEEcCCCCE------eEeCCCCCc---cceEECCCCCEEEEeecCCCCCceEEEecc--c----hh
Confidence               1      2356677776653      333433332   226699999988888776444446666442  2    34


Q ss_pred             eeeecccccCCCcccEEEEEEecCCcEEEEEeecCC---CCeEEEEecCCCeEE
Q psy463          400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG---IPEIMLFDKTGQRLL  450 (790)
Q Consensus       400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~---~~~i~~~~~~~~~~~  450 (790)
                      +|+..      ...+.....|+|||++++.....+-   ...+.+++..|..+.
T Consensus       348 ~i~~~------~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~  395 (566)
T KOG2315|consen  348 LIAKF------KAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLH  395 (566)
T ss_pred             hcccc------ccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceee
Confidence            55542      2223455789999999988766654   445677777665444

>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]

Probab=98.46  E-value=9.8e-07  Score=91.27  Aligned_cols=129  Identities=19%  Similarity=0.250  Sum_probs=83.4

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCC-eEEEEEcCCCCCCChhh-hHhhh--hcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKD-IVVAYIDGRNSALKGNT-LKYAG--YRR  558 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G-~~v~~~d~rG~~~~g~~-~~~~~--~~~  558 (790)
                      +...++.|..    +.++.||||++|||.....  ......+....++++| ++|+.+|||-.. .|.- +....  ...
T Consensus        80 L~LNIwaP~~----~a~~~PVmV~IHGG~y~~G--s~s~~~ydgs~La~~g~vVvVSvNYRLG~-lGfL~~~~~~~~~~~  152 (491)
T COG2272          80 LYLNIWAPEV----PAEKLPVMVYIHGGGYIMG--SGSEPLYDGSALAARGDVVVVSVNYRLGA-LGFLDLSSLDTEDAF  152 (491)
T ss_pred             eeEEeeccCC----CCCCCcEEEEEeccccccC--CCcccccChHHHHhcCCEEEEEeCccccc-ceeeehhhccccccc
Confidence            5556777872    4667899999999886532  2222223344555577 999999999422 1211 10100  111


Q ss_pred             CCccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEeCCCC
Q psy463          559 LGTVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISVAPVT  620 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~~~~~  620 (790)
                      -...-+.|++.+++|+.++   +| -|++.|.|+|.|.|++.++.++. .|.  ..|..+|+.+|..
T Consensus       153 ~~n~Gl~DqilALkWV~~NIe~FG-GDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~  217 (491)
T COG2272         153 ASNLGLLDQILALKWVRDNIEAFG-GDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAA  217 (491)
T ss_pred             cccccHHHHHHHHHHHHHHHHHhC-CCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCC
Confidence            1114588999999999765   55 79999999999999998887766 342  3566666666544

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.45  E-value=0.00022  Score=71.19  Aligned_cols=233  Identities=13%  Similarity=0.073  Sum_probs=125.2

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      .|.|.++...|+|+.-...            .|++++.+++.      ...+....   ..-+..+.+++  .+|+... 
T Consensus         4 gp~~d~~~g~l~~~D~~~~------------~i~~~~~~~~~------~~~~~~~~---~~G~~~~~~~g--~l~v~~~-   59 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGG------------RIYRVDPDTGE------VEVIDLPG---PNGMAFDRPDG--RLYVADS-   59 (246)
T ss_dssp             EEEEETTTTEEEEEETTTT------------EEEEEETTTTE------EEEEESSS---EEEEEEECTTS--EEEEEET-
T ss_pred             ceEEECCCCEEEEEEcCCC------------EEEEEECCCCe------EEEEecCC---CceEEEEccCC--EEEEEEc-
Confidence            5789997778888764332            89999998874      22222222   22233442223  3344332 


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccC--c
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQ--N  269 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~--~  269 (790)
                                 ..+.++|+++++.+.+      ..           .+...........+.+.|||+ ++.-.....  .
T Consensus        60 -----------~~~~~~d~~~g~~~~~------~~-----------~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~  111 (246)
T PF08450_consen   60 -----------GGIAVVDPDTGKVTVL------AD-----------LPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASG  111 (246)
T ss_dssp             -----------TCEEEEETTTTEEEEE------EE-----------EETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTC
T ss_pred             -----------CceEEEecCCCcEEEE------ee-----------ccCCCcccCCCceEEEcCCCCEEEEecCCCcccc
Confidence                       4566668877753222      10           000001345567899999999 443333222  1


Q ss_pred             c--eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCc-ccC
Q psy463          270 R--ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG-IKD  346 (790)
Q Consensus       270 ~--~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~-~~~  346 (790)
                      .  ..||+++.. ++.+.+...-.      ....+.|||||+.|++.-+      .      ...|+.++++.... ..+
T Consensus       112 ~~~g~v~~~~~~-~~~~~~~~~~~------~pNGi~~s~dg~~lyv~ds------~------~~~i~~~~~~~~~~~~~~  172 (246)
T PF08450_consen  112 IDPGSVYRIDPD-GKVTVVADGLG------FPNGIAFSPDGKTLYVADS------F------NGRIWRFDLDADGGELSN  172 (246)
T ss_dssp             GGSEEEEEEETT-SEEEEEEEEES------SEEEEEEETTSSEEEEEET------T------TTEEEEEEEETTTCCEEE
T ss_pred             ccccceEEECCC-CeEEEEecCcc------cccceEECCcchheeeccc------c------cceeEEEeccccccceee
Confidence            2  569999998 77766655422      1347999999998885443      2      34699998863220 000


Q ss_pred             C-CcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEe-cCC
Q psy463          347 K-VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFS-TNV  424 (790)
Q Consensus       347 ~-~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s-~dg  424 (790)
                      . ....+........+ ++.+.+|+ ||.....+    ..|++++.++  .....+..       ......+..|. +|.
T Consensus       173 ~~~~~~~~~~~g~pDG-~~vD~~G~-l~va~~~~----~~I~~~~p~G--~~~~~i~~-------p~~~~t~~~fgg~~~  237 (246)
T PF08450_consen  173 RRVFIDFPGGPGYPDG-LAVDSDGN-LWVADWGG----GRIVVFDPDG--KLLREIEL-------PVPRPTNCAFGGPDG  237 (246)
T ss_dssp             EEEEEE-SSSSCEEEE-EEEBTTS--EEEEEETT----TEEEEEETTS--CEEEEEE--------SSSSEEEEEEESTTS
T ss_pred             eeeEEEcCCCCcCCCc-ceEcCCCC-EEEEEcCC----CEEEEECCCc--cEEEEEcC-------CCCCEEEEEEECCCC
Confidence            0 01112222212233 77888886 65554433    4788888875  22333332       22256677784 666


Q ss_pred             cEEEEEe
Q psy463          425 SYYVLSC  431 (790)
Q Consensus       425 ~~~~~~~  431 (790)
                      +.|+.+.
T Consensus       238 ~~L~vTt  244 (246)
T PF08450_consen  238 KTLYVTT  244 (246)
T ss_dssp             SEEEEEE
T ss_pred             CEEEEEe
Confidence            7665553

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG2281|consensus

Probab=98.45  E-value=9.6e-05  Score=77.96  Aligned_cols=192  Identities=19%  Similarity=0.266  Sum_probs=107.8

Q ss_pred             ecCCceeEeCCCC----CceEEEEecCCce---------------eEEEecccCCCCCCCcCCC----------------
Q psy463            7 LSSSSALWFSPSG----NNLAYASFDDNRT---------------VIMTIPFYGNPGHPSSQYT----------------   51 (790)
Q Consensus         7 ~~~~~~~~wSPDG----~~iaf~~~~~~~~---------------~~~~~~~~g~~~~~~~~~~----------------   51 (790)
                      |.+-...||||-.    .+|+|.-.++..+               +-|.+|..|.+|.++....                
T Consensus       264 fdR~~GyWW~p~s~~~~~rIlYeeVdesev~V~h~~s~~~~~~~~d~~rYPrtGt~Nak~~Lkmv~~~~~~~gk~~~v~~  343 (867)
T KOG2281|consen  264 FDRFEGYWWSPPSGLKILRILYEEVDESEVEVIHVPSPVLGDRRVDSYRYPRTGTKNAKSTLKMVEFENDAEGKIYDVPL  343 (867)
T ss_pred             HHhhcceeecCCCCCceEEEEeeecChhheEEEeccCcccCCCccccccCCcCCCCCceeeEEEEEEeeccccceeccch
Confidence            6666789999733    4577765554434               4456677777766542110                


Q ss_pred             ----cccc-CC--CCccccccCCCcceeE--eeeecccceeEEEEeeCCCCee--------------------eEEEeec
Q psy463           52 ----QAIN-LR--EPVLSRVNWANESVVA--AWVNRVQNRARITRCSINEGTC--------------------DVVFSRD  102 (790)
Q Consensus        52 ----~~~~-~~--~~~~~~~~w~~~~~~~--~~~~r~~~~~~~~~~~~~~~~~--------------------~~~~~~~  102 (790)
                          .+.. +.  -.++.+++|.+|++.+  +-++|.|....+-+...+.+-.                    -.+...+
T Consensus       344 kdlv~~~~~~f~~~EYI~Ragwtpdgkyvwvq~LdR~Q~~l~iilip~~~f~~~~dn~~~~~~~~~~v~~~~~~~viyee  423 (867)
T KOG2281|consen  344 KDLVQPFHCLFEDVEYIARAGWTPDGKYVWVQVLDRSQQRLQIILIPPTLFIPKEDNLQLRTDLNMGVPDDVSPEVIYEE  423 (867)
T ss_pred             hhcccccccccccceeeeeccccCCCcEEEEEEecCCcceeEEEEECHHHcCCccccHhhhhhhhhcCCcCCCcceEEec
Confidence                0001 11  1456788999999855  7789999888886664443322                    1233334


Q ss_pred             CCCCccccCC--cccc-cc-CCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcC----------Cc------cCCcce
Q psy463          103 LDRGWFEPFD--HLRF-SS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA----------GI------KDKVPV  162 (790)
Q Consensus       103 ~~~~~~~~~~--~~~~-sp-dg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~----------~~------~~~~~~  162 (790)
                      ...+|+...+  .|-+ ++ .+..-+.+.+...+         ++|+|++....+.          +.      ..+...
T Consensus       424 ~sd~winiHd~f~~~~~~~~e~~~~fi~asE~~~---------Frhly~its~lk~ng~~~s~~~~p~~~d~~c~i~ee~  494 (867)
T KOG2281|consen  424 PSDGWINIHDIFHPLPQSTHEASYPFIWASEETG---------FRHLYLITSLLKPNGYCLSLGSAPLDQDFKCRIKEEI  494 (867)
T ss_pred             CCCceEEhhhcccccccCCccceeeEEEeccccc---------ceEEEEEEeecccCCCcccccCCcccccccCcchhhe
Confidence            5567886532  2322 22 22222222322211         6799998643311          00      011245


Q ss_pred             eccccceEEEEEEe--eeccCCccEEEEecccCCCCCCCccccceeEEEecC-Ccc
Q psy463          163 PLTRGRFTVTEILA--WDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLD-DQA  215 (790)
Q Consensus       163 ~lt~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~  215 (790)
                      .||.|+|+|....+  .|...+  ++|+..+...+      -..|||++.++ .|+
T Consensus       495 altSgeweVl~r~Gi~VdE~~~--LVYf~gt~d~P------lE~hLyvvsye~~g~  542 (867)
T KOG2281|consen  495 ALTSGEWEVLARHGIWVDEVRK--LVYFVGTKDTP------LEHHLYVVSYENPGE  542 (867)
T ss_pred             eecccceeehhhcCeeecccce--EEEEEccCCCC------ceeeEEEEEEecCCc
Confidence            67999999998875  455544  55554433322      22699999998 566

>KOG2551|consensus

Probab=98.44  E-value=5.9e-06  Score=75.93  Aligned_cols=62  Identities=21%  Similarity=0.312  Sum_probs=50.2

Q ss_pred             hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          721 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       721 ~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      ..+ ++|.|-+.|+.|.++|...+..|++.+.++    ..+.-|| ||.+.. ...+.+.|.+||...+
T Consensus       160 ~~i-~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~vl~Hpg-gH~VP~-~~~~~~~i~~fi~~~~  221 (230)
T KOG2551|consen  160 RPL-STPSLHIFGETDTIVPSERSEQLAESFKDA----TVLEHPG-GHIVPN-KAKYKEKIADFIQSFL  221 (230)
T ss_pred             cCC-CCCeeEEecccceeecchHHHHHHHhcCCC----eEEecCC-CccCCC-chHHHHHHHHHHHHHH
Confidence            345 899999999999999999999999998876    4455554 999885 4477788888887643

>TIGR03230 lipo_lipase lipoprotein lipase

Probab=98.44  E-value=1.4e-06  Score=91.76  Aligned_cols=113  Identities=15%  Similarity=0.118  Sum_probs=74.8

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhc-CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADN-KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ..|++|++||...... ...|...+...++.. ..+.|+++|.+|.+.....  .+.  ..-.....++.+.+++|.+..
T Consensus        40 ~~ptvIlIHG~~~s~~-~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~--~a~--~~t~~vg~~la~lI~~L~~~~  114 (442)
T TIGR03230        40 ETKTFIVIHGWTVTGM-FESWVPKLVAALYEREPSANVIVVDWLSRAQQHYP--TSA--AYTKLVGKDVAKFVNWMQEEF  114 (442)
T ss_pred             CCCeEEEECCCCcCCc-chhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCc--ccc--ccHHHHHHHHHHHHHHHHHhh
Confidence            3578999999876421 233443344444432 3699999999987643211  111  000122356667777776534


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      + ++.+++.|+||||||.+|..++.+.|. ++..++++.|.
T Consensus       115 g-l~l~~VhLIGHSLGAhIAg~ag~~~p~-rV~rItgLDPA  153 (442)
T TIGR03230       115 N-YPWDNVHLLGYSLGAHVAGIAGSLTKH-KVNRITGLDPA  153 (442)
T ss_pred             C-CCCCcEEEEEECHHHHHHHHHHHhCCc-ceeEEEEEcCC
Confidence            4 567899999999999999999987774 78888888775

Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.

>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases

Probab=98.43  E-value=4.7e-07  Score=102.37  Aligned_cols=132  Identities=22%  Similarity=0.265  Sum_probs=82.3

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      +..-++.|....  ...++||||++|||....... .........+++..+++||.++||-.. .|.-.........+..
T Consensus       109 L~LnI~~P~~~~--~~~~lPV~v~ihGG~f~~G~~-~~~~~~~~~~~~~~~vivVt~nYRlg~-~Gfl~~~~~~~~~gN~  184 (535)
T PF00135_consen  109 LYLNIYTPSNAS--SNSKLPVMVWIHGGGFMFGSG-SFPPYDGASLAASKDVIVVTINYRLGA-FGFLSLGDLDAPSGNY  184 (535)
T ss_dssp             -EEEEEEETSSS--STTSEEEEEEE--STTTSSCT-TSGGGHTHHHHHHHTSEEEEE----HH-HHH-BSSSTTSHBSTH
T ss_pred             HHHhhhhccccc--cccccceEEEeecccccCCCc-ccccccccccccCCCEEEEEecccccc-cccccccccccCchhh
Confidence            566788898755  344799999999998764422 112223345566689999999999421 2211000000002345


Q ss_pred             chhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCC
Q psy463          563 EIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPV  619 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~  619 (790)
                      .+.|+..+++|+.++   +| -|+++|.|+|+|.||..+...+..-. ...|..+|+.+|.
T Consensus       185 Gl~Dq~~AL~WV~~nI~~FG-GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs  244 (535)
T PF00135_consen  185 GLLDQRLALKWVQDNIAAFG-GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS  244 (535)
T ss_dssp             HHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred             hhhhhHHHHHHHHhhhhhcc-cCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence            688999999999876   44 68999999999999998877665421 3589999988884

Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....

>KOG0279|consensus

Probab=98.41  E-value=0.00019  Score=67.80  Aligned_cols=181  Identities=11%  Similarity=0.092  Sum_probs=110.7

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|.+.|+++|+.     .+++-                 ....-+..+++|||.+.+..-+|+..   |-+++..++-.
T Consensus        85 ~~lrlWDl~~g~~-----t~~f~-----------------GH~~dVlsva~s~dn~qivSGSrDkT---iklwnt~g~ck  139 (315)
T KOG0279|consen   85 GTLRLWDLATGES-----TRRFV-----------------GHTKDVLSVAFSTDNRQIVSGSRDKT---IKLWNTLGVCK  139 (315)
T ss_pred             ceEEEEEecCCcE-----EEEEE-----------------ecCCceEEEEecCCCceeecCCCcce---eeeeeecccEE
Confidence            5778889999874     22332                 45566789999999997666666543   77777665544


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEE-EEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEE
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLL-ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI  362 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~-~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~  362 (790)
                      -.+.... .+.|+.   ...|||+....++ .++    .++        .+-++|+++-+      .+.--.+.-.....
T Consensus       140 ~t~~~~~-~~~WVs---cvrfsP~~~~p~Ivs~s----~Dk--------tvKvWnl~~~~------l~~~~~gh~~~v~t  197 (315)
T KOG0279|consen  140 YTIHEDS-HREWVS---CVRFSPNESNPIIVSAS----WDK--------TVKVWNLRNCQ------LRTTFIGHSGYVNT  197 (315)
T ss_pred             EEEecCC-CcCcEE---EEEEcCCCCCcEEEEcc----CCc--------eEEEEccCCcc------hhhccccccccEEE
Confidence            4444332 266764   7899999644332 344    444        57888987655      33321222222234


Q ss_pred             EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEE
Q psy463          363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLF  442 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~  442 (790)
                      ..+||||...+.-..+     ..++..+++.  ++ .+-+-+      ....+.+..|||+.-+++...    .+.|.+.
T Consensus       198 ~~vSpDGslcasGgkd-----g~~~LwdL~~--~k-~lysl~------a~~~v~sl~fspnrywL~~at----~~sIkIw  259 (315)
T KOG0279|consen  198 VTVSPDGSLCASGGKD-----GEAMLWDLNE--GK-NLYSLE------AFDIVNSLCFSPNRYWLCAAT----ATSIKIW  259 (315)
T ss_pred             EEECCCCCEEecCCCC-----ceEEEEEccC--Cc-eeEecc------CCCeEeeEEecCCceeEeecc----CCceEEE
Confidence            7899999966552222     5777777765  22 122221      445778899999876665432    3348888


Q ss_pred             ecCCCeE
Q psy463          443 DKTGQRL  449 (790)
Q Consensus       443 ~~~~~~~  449 (790)
                      +++++..
T Consensus       260 dl~~~~~  266 (315)
T KOG0279|consen  260 DLESKAV  266 (315)
T ss_pred             eccchhh
Confidence            8877543

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.41  E-value=0.00063  Score=67.88  Aligned_cols=230  Identities=13%  Similarity=0.143  Sum_probs=127.5

Q ss_pred             EeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEE
Q psy463          175 LAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNW  254 (790)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~w  254 (790)
                      ..|+++.+. +||+...           ...||+++.++++...      +.                  ... ......
T Consensus         5 p~~d~~~g~-l~~~D~~-----------~~~i~~~~~~~~~~~~------~~------------------~~~-~~G~~~   47 (246)
T PF08450_consen    5 PVWDPRDGR-LYWVDIP-----------GGRIYRVDPDTGEVEV------ID------------------LPG-PNGMAF   47 (246)
T ss_dssp             EEEETTTTE-EEEEETT-----------TTEEEEEETTTTEEEE------EE------------------SSS-EEEEEE
T ss_pred             eEEECCCCE-EEEEEcC-----------CCEEEEEECCCCeEEE------Ee------------------cCC-CceEEE
Confidence            467765543 5555331           2689999998875311      11                  111 233444


Q ss_pred             c-cCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC-cccccCCceeEccCCCEEEEEEccccccCCCCCcCcc--
Q psy463          255 A-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR-GWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW--  330 (790)
Q Consensus       255 s-pDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~-~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~--  330 (790)
                      . +||+++......     +.++|.++++.+.+....... ... ...+.++.|||+ |++..+.......      .  
T Consensus        48 ~~~~g~l~v~~~~~-----~~~~d~~~g~~~~~~~~~~~~~~~~-~~ND~~vd~~G~-ly~t~~~~~~~~~------~~~  114 (246)
T PF08450_consen   48 DRPDGRLYVADSGG-----IAVVDPDTGKVTVLADLPDGGVPFN-RPNDVAVDPDGN-LYVTDSGGGGASG------IDP  114 (246)
T ss_dssp             ECTTSEEEEEETTC-----EEEEETTTTEEEEEEEEETTCSCTE-EEEEEEE-TTS--EEEEEECCBCTTC------GGS
T ss_pred             EccCCEEEEEEcCc-----eEEEecCCCcEEEEeeccCCCcccC-CCceEEEcCCCC-EEEEecCCCcccc------ccc
Confidence            4 787754444332     666699999888887764222 222 234789999998 7655541110111      1  


Q ss_pred             cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc---ceeeecccc
Q psy463          331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP---ECITCDLLT  407 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~---~~lt~~~~~  407 (790)
                      ..||+++.+ ++      ...+..+ .....-++|+||++.||+.....    ..|++++++....+.   +.+..    
T Consensus       115 g~v~~~~~~-~~------~~~~~~~-~~~pNGi~~s~dg~~lyv~ds~~----~~i~~~~~~~~~~~~~~~~~~~~----  178 (246)
T PF08450_consen  115 GSVYRIDPD-GK------VTVVADG-LGFPNGIAFSPDGKTLYVADSFN----GRIWRFDLDADGGELSNRRVFID----  178 (246)
T ss_dssp             EEEEEEETT-SE------EEEEEEE-ESSEEEEEEETTSSEEEEEETTT----TEEEEEEEETTTCCEEEEEEEEE----
T ss_pred             cceEEECCC-Ce------EEEEecC-cccccceEECCcchheeeccccc----ceeEEEeccccccceeeeeeEEE----
Confidence            469999987 54      4444332 22233489999999998876554    468888886421211   12211    


Q ss_pred             cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEcCCCcEEE
Q psy463          408 SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQ  484 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~  484 (790)
                      .....+....+.+..+|..++...   ....|++++.+++.+..+...           ...+..+.|-.++..+|.
T Consensus       179 ~~~~~g~pDG~~vD~~G~l~va~~---~~~~I~~~~p~G~~~~~i~~p-----------~~~~t~~~fgg~~~~~L~  241 (246)
T PF08450_consen  179 FPGGPGYPDGLAVDSDGNLWVADW---GGGRIVVFDPDGKLLREIELP-----------VPRPTNCAFGGPDGKTLY  241 (246)
T ss_dssp             -SSSSCEEEEEEEBTTS-EEEEEE---TTTEEEEEETTSCEEEEEE-S-----------SSSEEEEEEESTTSSEEE
T ss_pred             cCCCCcCCCcceEcCCCCEEEEEc---CCCEEEEECCCccEEEEEcCC-----------CCCEEEEEEECCCCCEEE
Confidence            111223466788999998655443   345688888886555444321           124555666555555554

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function

Probab=98.39  E-value=3.2e-05  Score=78.86  Aligned_cols=171  Identities=18%  Similarity=0.148  Sum_probs=93.5

Q ss_pred             CCccchhHHHHHHHHHHHhCCCcC-CCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYID-KTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d-~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                      +|...+.|++.|+.++..+.+... .-++.++|+|+|||+|...+.-.|. .+.+++-.++......      +-.+|..
T Consensus       158 ~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~-~~~~~iDns~~~~p~l------~~I~Gre  230 (403)
T PF11144_consen  158 FGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPW-LFDGVIDNSSYALPPL------RYIFGRE  230 (403)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCcc-ceeEEEecCccccchh------heeeeee
Confidence            333457888899999988766443 2489999999999999999988875 8888887776543210      0001110


Q ss_pred             CccCchhhhhhccccchhhhccCCcEEEEeecCCCccC--hhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhh
Q psy463          638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH--FQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAA  715 (790)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  715 (790)
                         -.-..|....-...-.++.-.-..-.+.+.+...|  +..+..+.+.+......                       
T Consensus       231 ---~~~~~y~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL-----------------------  284 (403)
T PF11144_consen  231 ---IDFMKYICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHL-----------------------  284 (403)
T ss_pred             ---cCcccccccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHH-----------------------
Confidence               00000000000000000000000001111111111  11112222221111100                       


Q ss_pred             hhhhhhcc-CCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcC
Q psy463          716 LNNKVDRI-RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYP  764 (790)
Q Consensus       716 ~~~~~~~i-~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p  764 (790)
                        ....+. +++-.+..|+..|..+|.++-++|++.+++.|.++++..+.
T Consensus       285 --~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIk  332 (403)
T PF11144_consen  285 --KIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIK  332 (403)
T ss_pred             --HHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEec
Confidence              111122 25677889999999999999999999999999999999883

>KOG3847|consensus

Probab=98.36  E-value=4.6e-06  Score=80.02  Aligned_cols=115  Identities=20%  Similarity=0.278  Sum_probs=72.8

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC-hhhhHhh----h-hccC------------
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK-GNTLKYA----G-YRRL------------  559 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~-g~~~~~~----~-~~~~------------  559 (790)
                      ..++|+|||.||.++...+...    +...++ ++||+|.++..|..... ...+...    . ...|            
T Consensus       115 ~~k~PvvvFSHGLggsRt~YSa----~c~~LA-ShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~eke  189 (399)
T KOG3847|consen  115 NDKYPVVVFSHGLGGSRTLYSA----YCTSLA-SHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKE  189 (399)
T ss_pred             CCCccEEEEecccccchhhHHH----HhhhHh-hCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCcee
Confidence            5789999999999887543332    333444 49999999999864321 0000000    0 0000            


Q ss_pred             -------CccchhHHHHHHHHHHH--------------------hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEE
Q psy463          560 -------GTVEIYDQINVTRYLQE--------------------NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKC  612 (790)
Q Consensus       560 -------~~~~~~D~~~~~~~l~~--------------------~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~  612 (790)
                             -...+.++..+++-+.+                    ..+.+|..+++|+|||.||..+......+  ..|+|
T Consensus       190 f~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~--t~Frc  267 (399)
T KOG3847|consen  190 FHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH--TDFRC  267 (399)
T ss_pred             EEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc--cceee
Confidence                   00124555555554422                    12357788999999999999999888754  38999


Q ss_pred             EEEeCCC
Q psy463          613 GISVAPV  619 (790)
Q Consensus       613 ~v~~~~~  619 (790)
                      +|+..++
T Consensus       268 aI~lD~W  274 (399)
T KOG3847|consen  268 AIALDAW  274 (399)
T ss_pred             eeeeeee
Confidence            9988774

>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family

Probab=98.32  E-value=2.4e-06  Score=82.62  Aligned_cols=46  Identities=22%  Similarity=0.123  Sum_probs=32.8

Q ss_pred             ccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          722 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       722 ~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                      +| ++|+|-++|.+|..++.+.++.+++.+...   .+++..++ ||.+-.
T Consensus       159 ~i-~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g-GH~vP~  204 (212)
T PF03959_consen  159 KI-SIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG-GHHVPR  204 (212)
T ss_dssp             T----EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS-SSS---
T ss_pred             cC-CCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC-CCcCcC
Confidence            45 899999999999999999999999998874   47777766 887764

It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.

>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]

Probab=98.32  E-value=5.4e-05  Score=72.69  Aligned_cols=42  Identities=33%  Similarity=0.389  Sum_probs=37.0

Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW  622 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~  622 (790)
                      .+|.++.+|+|||+||.+++.++..+|+ .|.+.++.+|-..|
T Consensus       133 ~~~~~~~~i~GhSlGGLfvl~aLL~~p~-~F~~y~~~SPSlWw  174 (264)
T COG2819         133 RTNSERTAIIGHSLGGLFVLFALLTYPD-CFGRYGLISPSLWW  174 (264)
T ss_pred             ccCcccceeeeecchhHHHHHHHhcCcc-hhceeeeecchhhh
Confidence            3788999999999999999999998885 99999999986544

>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]

Probab=98.32  E-value=0.00047  Score=78.29  Aligned_cols=53  Identities=26%  Similarity=0.337  Sum_probs=48.0

Q ss_pred             chhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhc
Q psy463          642 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQS  695 (790)
Q Consensus       642 ~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~  695 (790)
                      +...|...+|+.++++++ +|+|++||+.|++|+.+++++++++|+..+...+.
T Consensus       534 ~~~~~~~~sp~~~~~~i~-~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~  586 (620)
T COG1506         534 DREKYEDRSPIFYADNIK-TPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVEL  586 (620)
T ss_pred             ChHHHHhcChhhhhcccC-CCEEEEeecCCccCChHHHHHHHHHHHHcCceEEE
Confidence            577899999999999998 89999999999999999999999999998876333

>KOG0266|consensus

Probab=98.30  E-value=0.00042  Score=75.66  Aligned_cols=226  Identities=19%  Similarity=0.142  Sum_probs=125.7

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEc-CCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL-DDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~-~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      -.|||||+.++= ...+.            .|+++++ +.+.     ....+......+ .-..+++++ +.++-.+.  
T Consensus       209 ~~fs~d~~~l~s-~s~D~------------tiriwd~~~~~~-----~~~~l~gH~~~v-~~~~f~p~g-~~i~Sgs~--  266 (456)
T KOG0266|consen  209 VAFSPDGSYLLS-GSDDK------------TLRIWDLKDDGR-----NLKTLKGHSTYV-TSVAFSPDG-NLLVSGSD--  266 (456)
T ss_pred             eEECCCCcEEEE-ecCCc------------eEEEeeccCCCe-----EEEEecCCCCce-EEEEecCCC-CEEEEecC--
Confidence            378999995542 22222            7888887 3332     223333333233 445777777 32332221  


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                                ...+.+.|+.+++..     ..|.                 .....+..+.+++||+++.....++   .
T Consensus       267 ----------D~tvriWd~~~~~~~-----~~l~-----------------~hs~~is~~~f~~d~~~l~s~s~d~---~  311 (456)
T KOG0266|consen  267 ----------DGTVRIWDVRTGECV-----RKLK-----------------GHSDGISGLAFSPDGNLLVSASYDG---T  311 (456)
T ss_pred             ----------CCcEEEEeccCCeEE-----Eeee-----------------ccCCceEEEEECCCCCEEEEcCCCc---c
Confidence                      146666677776642     2333                 4556788999999999555544322   3


Q ss_pred             EEEEECCCCcee--EEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463          273 ITRCSINEGTCD--VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  350 (790)
Q Consensus       273 i~~~~~~~g~~~--~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~  350 (790)
                      |.++|+.++...  .+..... . -. +.....|||+|+.|+ ...    .++        ++-++|+..+.     ...
T Consensus       312 i~vwd~~~~~~~~~~~~~~~~-~-~~-~~~~~~fsp~~~~ll-~~~----~d~--------~~~~w~l~~~~-----~~~  370 (456)
T KOG0266|consen  312 IRVWDLETGSKLCLKLLSGAE-N-SA-PVTSVQFSPNGKYLL-SAS----LDR--------TLKLWDLRSGK-----SVG  370 (456)
T ss_pred             EEEEECCCCceeeeecccCCC-C-CC-ceeEEEECCCCcEEE-Eec----CCC--------eEEEEEccCCc-----cee
Confidence            999999999833  2222211 1 10 245789999999887 444    233        68888887664     133


Q ss_pred             cccCCCeEEeE--EEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCC-cccEEEEEEecCCcEE
Q psy463          351 PLTRGRFTVTE--ILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQ-KCSYSGATFSTNVSYY  427 (790)
Q Consensus       351 ~lt~~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~-~~~~~~~~~s~dg~~~  427 (790)
                      ..+.....+..  .+..+++++.++-...+     ..++..++.+. .....+..       . ...+...++++....+
T Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d-----~~v~~~~~~s~-~~~~~l~~-------h~~~~~~~~~~~~~~~~~  437 (456)
T KOG0266|consen  371 TYTGHSNLVRCIFSPTLSTGGKLIYSGSED-----GSVYVWDSSSG-GILQRLEG-------HSKAAVSDLSSHPTENLI  437 (456)
T ss_pred             eecccCCcceeEecccccCCCCeEEEEeCC-----ceEEEEeCCcc-chhhhhcC-------CCCCceeccccCCCcCee
Confidence            33322221111  12336778766666555     56777777651 22222222       2 3445567777877766


Q ss_pred             EEE
Q psy463          428 VLS  430 (790)
Q Consensus       428 ~~~  430 (790)
                      +..
T Consensus       438 ~s~  440 (456)
T KOG0266|consen  438 ASS  440 (456)
T ss_pred             eec
Confidence            554

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.25  E-value=0.00023  Score=74.76  Aligned_cols=186  Identities=12%  Similarity=0.154  Sum_probs=104.6

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      .+|.++|.++.+..     ..+.                 ........+.+||||++++..+|+.   .|.++|+.+++.
T Consensus        16 ~~v~viD~~t~~~~-----~~i~-----------------~~~~~h~~~~~s~Dgr~~yv~~rdg---~vsviD~~~~~~   70 (369)
T PF02239_consen   16 GSVAVIDGATNKVV-----ARIP-----------------TGGAPHAGLKFSPDGRYLYVANRDG---TVSVIDLATGKV   70 (369)
T ss_dssp             TEEEEEETTT-SEE-----EEEE------------------STTEEEEEE-TT-SSEEEEEETTS---EEEEEETTSSSE
T ss_pred             CEEEEEECCCCeEE-----EEEc-----------------CCCCceeEEEecCCCCEEEEEcCCC---eEEEEECCcccE
Confidence            69999998886531     2221                 1122234577999999877777753   499999999875


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCe------
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF------  357 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~------  357 (790)
                      ..-..... .     ....++|+||++++. +.   ...+        .+.++|.++.+     ..+.+..+..      
T Consensus        71 v~~i~~G~-~-----~~~i~~s~DG~~~~v-~n---~~~~--------~v~v~D~~tle-----~v~~I~~~~~~~~~~~  127 (369)
T PF02239_consen   71 VATIKVGG-N-----PRGIAVSPDGKYVYV-AN---YEPG--------TVSVIDAETLE-----PVKTIPTGGMPVDGPE  127 (369)
T ss_dssp             EEEEE-SS-E-----EEEEEE--TTTEEEE-EE---EETT--------EEEEEETTT-------EEEEEE--EE-TTTS-
T ss_pred             EEEEecCC-C-----cceEEEcCCCCEEEE-Ee---cCCC--------ceeEecccccc-----ceeecccccccccccC
Confidence            43333221 1     347899999998874 43   2334        78899988766     1233322211      


Q ss_pred             -EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCC
Q psy463          358 -TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGI  436 (790)
Q Consensus       358 -~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~  436 (790)
                       .+.. +.-+|.+...++...+.    .+++.++...  .+...++..  .   -........|+|+++|++......+ 
T Consensus       128 ~Rv~a-Iv~s~~~~~fVv~lkd~----~~I~vVdy~d--~~~~~~~~i--~---~g~~~~D~~~dpdgry~~va~~~sn-  194 (369)
T PF02239_consen  128 SRVAA-IVASPGRPEFVVNLKDT----GEIWVVDYSD--PKNLKVTTI--K---VGRFPHDGGFDPDGRYFLVAANGSN-  194 (369)
T ss_dssp             --EEE-EEE-SSSSEEEEEETTT----TEEEEEETTT--SSCEEEEEE--E-----TTEEEEEE-TTSSEEEEEEGGGT-
T ss_pred             CCcee-EEecCCCCEEEEEEccC----CeEEEEEecc--ccccceeee--c---ccccccccccCcccceeeecccccc-
Confidence             1223 33467777666655543    4889998765  222111110  0   1234567899999999877654443 


Q ss_pred             CeEEEEecCCCeEEE
Q psy463          437 PEIMLFDKTGQRLLY  451 (790)
Q Consensus       437 ~~i~~~~~~~~~~~~  451 (790)
                       .+-++|.+++++..
T Consensus       195 -~i~viD~~~~k~v~  208 (369)
T PF02239_consen  195 -KIAVIDTKTGKLVA  208 (369)
T ss_dssp             -EEEEEETTTTEEEE
T ss_pred             -eeEEEeeccceEEE
Confidence             78888887765543

...

>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters

Probab=98.25  E-value=9.4e-05  Score=75.49  Aligned_cols=123  Identities=19%  Similarity=0.157  Sum_probs=79.1

Q ss_pred             EEEEEe-CCCCCCCCCCCccEEEEEcCCCCccccccccccc-h-HHHHHhcCCeEEEEEcCCCCC--CChhhhHhhhhcc
Q psy463          484 QVKLFL-PPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-W-NLYLADNKDIVVAYIDGRNSA--LKGNTLKYAGYRR  558 (790)
Q Consensus       484 ~~~~~~-P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~-~~~~~~~~G~~v~~~d~rG~~--~~g~~~~~~~~~~  558 (790)
                      ..|++. |..++   .+.-|+|+++|||+............ . ...++.  ..++++.||.-++  ..|..+.      
T Consensus       107 s~Wlvk~P~~~~---pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yP------  175 (374)
T PF10340_consen  107 SYWLVKAPNRFK---PKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYP------  175 (374)
T ss_pred             eEEEEeCCcccC---CCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCc------
Confidence            356776 76543   23459999999998753322221111 1 112333  5589999998654  2233322      


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC----CCCceEEEEEeCCCCCcc
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD----PSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~----p~~~~~~~v~~~~~~~~~  623 (790)
                         ..+.++.++.+++.+..+   .+.|.++|-|.||.+++.++..-    +...-+.+++++|+.+..
T Consensus       176 ---tQL~qlv~~Y~~Lv~~~G---~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~  238 (374)
T PF10340_consen  176 ---TQLRQLVATYDYLVESEG---NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV  238 (374)
T ss_pred             ---hHHHHHHHHHHHHHhccC---CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence               447888899999985244   47899999999999998765431    112346899999988765

In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].

>PTZ00472 serine carboxypeptidase (CBP1); Provisional

Probab=98.24  E-value=3.2e-05  Score=83.62  Aligned_cols=137  Identities=18%  Similarity=0.121  Sum_probs=82.7

Q ss_pred             CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-------------cchHHHHHhcCCeEEEEEcC-CCCC
Q psy463          480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-------------VDWNLYLADNKDIVVAYIDG-RNSA  545 (790)
Q Consensus       480 g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-------------~~~~~~~~~~~G~~v~~~d~-rG~~  545 (790)
                      +..+.+|++...+    .....|+|++++||||.......+.             ......-.. +-..++.+|. +|+|
T Consensus        60 ~~~lFyw~~~s~~----~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~-~~~~~l~iDqP~G~G  134 (462)
T PTZ00472         60 DKHYFYWAFGPRN----GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWN-NEAYVIYVDQPAGVG  134 (462)
T ss_pred             CceEEEEEEEcCC----CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccc-cccCeEEEeCCCCcC
Confidence            5678888887664    3456799999999999754211110             000011111 2245788886 4765


Q ss_pred             CChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC---------CCCceEEEEEe
Q psy463          546 LKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD---------PSNVFKCGISV  616 (790)
Q Consensus       546 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~---------p~~~~~~~v~~  616 (790)
                      .+-...  .....-....++|+..+++.+.++++.....++.|+|+||||..+..++.+-         +.-.+++++.+
T Consensus       135 ~S~~~~--~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IG  212 (462)
T PTZ00472        135 FSYADK--ADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVG  212 (462)
T ss_pred             cccCCC--CCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEe
Confidence            432110  1111111234677777777666557766678999999999999886665431         11247789999


Q ss_pred             CCCCCcc
Q psy463          617 APVTDWI  623 (790)
Q Consensus       617 ~~~~~~~  623 (790)
                      .|+++..
T Consensus       213 Ng~~dp~  219 (462)
T PTZ00472        213 NGLTDPY  219 (462)
T ss_pred             ccccChh
Confidence            9987754

>KOG4497|consensus

Probab=98.23  E-value=0.00018  Score=69.45  Aligned_cols=100  Identities=14%  Similarity=0.230  Sum_probs=64.3

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      .+-.+||+|..+++ +.+   + .-      .+.||++|+..-+     ....|.. .-.+. .+.|+|.--+++.....
T Consensus       321 ~g~lafs~Ds~y~a-Trn---d-~~------PnalW~Wdlq~l~-----l~avLiQ-k~pir-af~WdP~~prL~vctg~  382 (447)
T KOG4497|consen  321 AGKLAFSCDSTYAA-TRN---D-KY------PNALWLWDLQNLK-----LHAVLIQ-KHPIR-AFEWDPGRPRLVVCTGK  382 (447)
T ss_pred             cceeeecCCceEEe-eec---C-CC------CceEEEEechhhh-----hhhhhhh-cccee-EEEeCCCCceEEEEcCC
Confidence            35678999998777 554   1 22      4579999987654     1222322 22233 37899998888887765


Q ss_pred             CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                           .+||.-...+    ..++-.     +...+.+..+.|.-+|..++.-
T Consensus       383 -----srLY~W~psg----~~~V~v-----P~~GF~i~~l~W~~~g~~i~l~  420 (447)
T KOG4497|consen  383 -----SRLYFWAPSG----PRVVGV-----PKKGFNIQKLQWLQPGEFIVLC  420 (447)
T ss_pred             -----ceEEEEcCCC----ceEEec-----CCCCceeeeEEecCCCcEEEEE
Confidence                 6899887765    222221     1244777888898888877654

>KOG1446|consensus

Probab=98.23  E-value=0.0025  Score=61.66  Aligned_cols=166  Identities=11%  Similarity=0.143  Sum_probs=97.5

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      +....+..+.-||-+......+.+.   .|.+.|+...+|+-+....+       ..-++|.|.|-.+| ++.      +
T Consensus        98 GH~~~V~sL~~sP~~d~FlS~S~D~---tvrLWDlR~~~cqg~l~~~~-------~pi~AfDp~GLifA-~~~------~  160 (311)
T KOG1446|consen   98 GHKKRVNSLSVSPKDDTFLSSSLDK---TVRLWDLRVKKCQGLLNLSG-------RPIAAFDPEGLIFA-LAN------G  160 (311)
T ss_pred             CCCceEEEEEecCCCCeEEecccCC---eEEeeEecCCCCceEEecCC-------CcceeECCCCcEEE-Eec------C
Confidence            4455677888899887444443332   28899999888887766543       23689999997555 333      2


Q ss_pred             CCCcCcccEEEEEEcCCC-CcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          324 STPVDSWDHLTFIDLDDQ-AGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~-~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                            ...|.++|+..= ++  ....-.++.+ ..+... +.+|||||.|...++.     ..++.++.-.  |.+..-
T Consensus       161 ------~~~IkLyD~Rs~dkg--PF~tf~i~~~~~~ew~~-l~FS~dGK~iLlsT~~-----s~~~~lDAf~--G~~~~t  224 (311)
T KOG1446|consen  161 ------SELIKLYDLRSFDKG--PFTTFSITDNDEAEWTD-LEFSPDGKSILLSTNA-----SFIYLLDAFD--GTVKST  224 (311)
T ss_pred             ------CCeEEEEEecccCCC--CceeEccCCCCccceee-eEEcCCCCEEEEEeCC-----CcEEEEEccC--CcEeee
Confidence                  226888887531 10  0001123322 112233 7899999999988876     5677787644  332211


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                      -..   .......--+..|+||+++++-..   +-..|.++++++++
T Consensus       225 fs~---~~~~~~~~~~a~ftPds~Fvl~gs---~dg~i~vw~~~tg~  265 (311)
T KOG1446|consen  225 FSG---YPNAGNLPLSATFTPDSKFVLSGS---DDGTIHVWNLETGK  265 (311)
T ss_pred             Eee---ccCCCCcceeEEECCCCcEEEEec---CCCcEEEEEcCCCc
Confidence            110   011111224688999999775433   33457888887643

>PTZ00421 coronin; Provisional

Probab=98.21  E-value=0.0017  Score=70.85  Aligned_cols=168  Identities=16%  Similarity=0.213  Sum_probs=95.8

Q ss_pred             CEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          247 PVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       247 ~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ..+..+.|+|++. +++....+.   .|.++|+.+++........  .   .......|+|||+.|+ +.+    .++  
T Consensus       126 ~~V~~l~f~P~~~~iLaSgs~Dg---tVrIWDl~tg~~~~~l~~h--~---~~V~sla~spdG~lLa-tgs----~Dg--  190 (493)
T PTZ00421        126 KKVGIVSFHPSAMNVLASAGADM---VVNVWDVERGKAVEVIKCH--S---DQITSLEWNLDGSLLC-TTS----KDK--  190 (493)
T ss_pred             CcEEEEEeCcCCCCEEEEEeCCC---EEEEEECCCCeEEEEEcCC--C---CceEEEEEECCCCEEE-Eec----CCC--
Confidence            4466789999975 555544332   3888999888654433211  1   1245789999999776 555    456  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL  405 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~  405 (790)
                            .|.++|+.+++     ....+..+.........|.+++..|+..+.... ..+.|...++... .++..... +
T Consensus       191 ------~IrIwD~rsg~-----~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s-~Dr~VklWDlr~~-~~p~~~~~-~  256 (493)
T PTZ00421        191 ------KLNIIDPRDGT-----IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKS-QQRQIMLWDTRKM-ASPYSTVD-L  256 (493)
T ss_pred             ------EEEEEECCCCc-----EEEEEecCCCCcceEEEEcCCCCeEEEEecCCC-CCCeEEEEeCCCC-CCceeEec-c
Confidence                  68899988775     123333322111223678898887665443211 1145555565431 11111111 0


Q ss_pred             cccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          406 LTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       406 ~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                          ........+.|++|++.++....+  -..|.++++.+++.
T Consensus       257 ----d~~~~~~~~~~d~d~~~L~lggkg--Dg~Iriwdl~~~~~  294 (493)
T PTZ00421        257 ----DQSSALFIPFFDEDTNLLYIGSKG--EGNIRCFELMNERL  294 (493)
T ss_pred             ----CCCCceEEEEEcCCCCEEEEEEeC--CCeEEEEEeeCCce
Confidence                022345567899999987665433  34678888766543

>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular

Probab=98.17  E-value=4.8e-05  Score=79.34  Aligned_cols=69  Identities=20%  Similarity=0.212  Sum_probs=54.5

Q ss_pred             hhhccCC-ccEEEEecCCCcccchhhhHHHHHHHHhcCC-ceEEEEcCCCCCcCC--C--cchHHHHHHHHHHHHh
Q psy463          719 KVDRIRD-KQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MFQSQTYPDEEHGLI--G--VRPHFYHTLERFLDSC  788 (790)
Q Consensus       719 ~~~~i~~-~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-~~~~~~~p~~~H~~~--~--~~~~~~~~i~~fl~~~  788 (790)
                      .+++| + +|+|.+.|+.|.++|+.++..+.+.+...+- +.+.++.+++||.-.  .  .+++++..|.+||.++
T Consensus       332 dl~~I-~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~  406 (406)
T TIGR01849       332 DPGAI-TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN  406 (406)
T ss_pred             cHHHC-cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence            35678 6 9999999999999999999999988633322 345677778899643  2  6788999999999864

This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some

>KOG0266|consensus

Probab=98.17  E-value=0.00043  Score=75.57  Aligned_cols=164  Identities=13%  Similarity=0.167  Sum_probs=100.6

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ....++....|+|+|+.+.....+..   |.++|..++++...+....+     ......|++||..|+ ..+    .+|
T Consensus       244 gH~~~v~~~~f~p~g~~i~Sgs~D~t---vriWd~~~~~~~~~l~~hs~-----~is~~~f~~d~~~l~-s~s----~d~  310 (456)
T KOG0266|consen  244 GHSTYVTSVAFSPDGNLLVSGSDDGT---VRIWDVRTGECVRKLKGHSD-----GISGLAFSPDGNLLV-SAS----YDG  310 (456)
T ss_pred             CCCCceEEEEecCCCCEEEEecCCCc---EEEEeccCCeEEEeeeccCC-----ceEEEEECCCCCEEE-EcC----CCc
Confidence            55677899999999986666554433   99999999888776654321     255788999999887 444    456


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCc---ccccCCCeE-EeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVP---VPLTRGRFT-VTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE  399 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~---~~lt~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~  399 (790)
                              .|.++|+.++.      .   ..+...... ......|+|++++|+....++.   ..+|.+.  .. ..+.
T Consensus       311 --------~i~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~---~~~w~l~--~~-~~~~  370 (456)
T KOG0266|consen  311 --------TIRVWDLETGS------KLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRT---LKLWDLR--SG-KSVG  370 (456)
T ss_pred             --------cEEEEECCCCc------eeeeecccCCCCCCceeEEEECCCCcEEEEecCCCe---EEEEEcc--CC-ccee
Confidence                    68899998775      2   123222222 2334789999997776665532   4444443  21 1122


Q ss_pred             eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      +.+..    ......+..+..++++++++.....   ..|++++..++
T Consensus       371 ~~~~~----~~~~~~~~~~~~~~~~~~i~sg~~d---~~v~~~~~~s~  411 (456)
T KOG0266|consen  371 TYTGH----SNLVRCIFSPTLSTGGKLIYSGSED---GSVYVWDSSSG  411 (456)
T ss_pred             eeccc----CCcceeEecccccCCCCeEEEEeCC---ceEEEEeCCcc
Confidence            22221    0011234456668888877554433   34777777653

>KOG0973|consensus

Probab=98.17  E-value=0.00016  Score=80.73  Aligned_cols=184  Identities=12%  Similarity=0.081  Sum_probs=102.9

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEEC--------CCCc--------eeEEEE-EeCCCcccccCCceeEcc
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSI--------NEGT--------CDVVFS-RDLDRGWFEPFDHLRFSS  306 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~--------~~g~--------~~~l~~-~~~~~~~~~~~~~~~~sp  306 (790)
                      ...+.+.-+.|||||++++.-+.+. .-.|+....        .+|.        +..++. .+.      -..+..|||
T Consensus        67 ~h~~sv~CVR~S~dG~~lAsGSDD~-~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~------DV~Dv~Wsp  139 (942)
T KOG0973|consen   67 DHDGSVNCVRFSPDGSYLASGSDDR-LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDS------DVLDVNWSP  139 (942)
T ss_pred             cccCceeEEEECCCCCeEeeccCcc-eEEEeeecccCCcccccccccccccceeeEEEEEecCCC------ccceeccCC
Confidence            4455677899999999877765442 112333331        0011        111111 111      145899999


Q ss_pred             CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEE
Q psy463          307 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHM  386 (790)
Q Consensus       307 Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l  386 (790)
                      |++.++ +.+    .+.        .+.+++..+-+     ..+.|..+..-+.+ +.|+|-|++++-.+.+..   -.+
T Consensus       140 ~~~~lv-S~s----~Dn--------sViiwn~~tF~-----~~~vl~~H~s~VKG-vs~DP~Gky~ASqsdDrt---ikv  197 (942)
T KOG0973|consen  140 DDSLLV-SVS----LDN--------SVIIWNAKTFE-----LLKVLRGHQSLVKG-VSWDPIGKYFASQSDDRT---LKV  197 (942)
T ss_pred             CccEEE-Eec----ccc--------eEEEEccccce-----eeeeeecccccccc-eEECCccCeeeeecCCce---EEE
Confidence            999887 665    333        47777766554     24455555555666 899999998887777743   566


Q ss_pred             EEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecCC-----------CeEEEecc
Q psy463          387 YRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKTG-----------QRLLYWDT  454 (790)
Q Consensus       387 ~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~-----------~~~~~l~~  454 (790)
                      |+.+--   +-.+.++..... ....-.+..++|||||++|+..-.-.+ .+.+-+++-.+           +..+.+..
T Consensus       198 wrt~dw---~i~k~It~pf~~-~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrF  273 (942)
T KOG0973|consen  198 WRTSDW---GIEKSITKPFEE-SPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRF  273 (942)
T ss_pred             EEcccc---eeeEeeccchhh-CCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEe
Confidence            663211   122333321100 001235567899999999976533223 44455544332           23455667


Q ss_pred             chhHHH
Q psy463          455 NEDLRT  460 (790)
Q Consensus       455 ~~~~~~  460 (790)
                      ||.+..
T Consensus       274 nP~lfe  279 (942)
T KOG0973|consen  274 NPKLFE  279 (942)
T ss_pred             ChHHhc
Confidence            776643

>PRK04940 hypothetical protein; Provisional

Probab=98.10  E-value=9e-05  Score=67.40  Aligned_cols=55  Identities=9%  Similarity=0.116  Sum_probs=43.5

Q ss_pred             ccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHH
Q psy463          726 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDS  787 (790)
Q Consensus       726 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~  787 (790)
                      -.++++..+.|+++...++.+.+...      .+..+.+|.+|.|. +-++....|.+|+.+
T Consensus       125 ~r~~vllq~gDEvLDyr~a~~~y~~~------y~~~v~~GGdH~f~-~fe~~l~~I~~F~~~  179 (180)
T PRK04940        125 DRCLVILSRNDEVLDSQRTAEELHPY------YEIVWDEEQTHKFK-NISPHLQRIKAFKTL  179 (180)
T ss_pred             ccEEEEEeCCCcccCHHHHHHHhccC------ceEEEECCCCCCCC-CHHHHHHHHHHHHhc
Confidence            34689999999999998888777532      14678899999998 466788999999853

>PTZ00420 coronin; Provisional

Probab=98.07  E-value=0.0015  Score=71.88  Aligned_cols=121  Identities=11%  Similarity=0.117  Sum_probs=63.0

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccc--cCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFE--PFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~--~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      +..++|+|||++++....+.   .|.++|+.+++...-...  ..+...  ....-.|++|++.|+ +++.  +...   
T Consensus       170 V~SlswspdG~lLat~s~D~---~IrIwD~Rsg~~i~tl~g--H~g~~~s~~v~~~~fs~d~~~Il-TtG~--d~~~---  238 (568)
T PTZ00420        170 LSSLKWNIKGNLLSGTCVGK---HMHIIDPRKQEIASSFHI--HDGGKNTKNIWIDGLGGDDNYIL-STGF--SKNN---  238 (568)
T ss_pred             EEEEEECCCCCEEEEEecCC---EEEEEECCCCcEEEEEec--ccCCceeEEEEeeeEcCCCCEEE-EEEc--CCCC---
Confidence            56789999999665554332   388899988865432221  111000  000123569999877 4431  2222   


Q ss_pred             cCcccEEEEEEcCC-CCcccCCCccc-ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          327 VDSWDHLTFIDLDD-QAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       327 ~~~~~~l~~~d~~~-~~~~~~~~~~~-lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                         ..+|.++|+.. ++      +.. +........-.+.|+++...+|..+.. +   ..|+..++..
T Consensus       239 ---~R~VkLWDlr~~~~------pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkG-D---~tIr~~e~~~  294 (568)
T PTZ00420        239 ---MREMKLWDLKNTTS------ALVTMSIDNASAPLIPHYDESTGLIYLIGKG-D---GNCRYYQHSL  294 (568)
T ss_pred             ---ccEEEEEECCCCCC------ceEEEEecCCccceEEeeeCCCCCEEEEEEC-C---CeEEEEEccC
Confidence               34799999874 33      222 111111111136788876656555433 2   3455555543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.06  E-value=0.0044  Score=73.29  Aligned_cols=153  Identities=11%  Similarity=0.070  Sum_probs=77.5

Q ss_pred             EEEEEEEc-cCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          248 VLSRVNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       248 ~~~~~~ws-pDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      .+..+.|+ ++|+.++....+.   .|+++|+..+....... .+...   ......|+ |+..|+ +++    .++   
T Consensus       619 ~v~~v~~~~~~g~~latgs~dg---~I~iwD~~~~~~~~~~~-~~h~~---~V~~v~f~-~~~~lv-s~s----~D~---  682 (793)
T PLN00181        619 NICCVQFPSESGRSLAFGSADH---KVYYYDLRNPKLPLCTM-IGHSK---TVSYVRFV-DSSTLV-SSS----TDN---  682 (793)
T ss_pred             CeEEEEEeCCCCCEEEEEeCCC---eEEEEECCCCCccceEe-cCCCC---CEEEEEEe-CCCEEE-EEE----CCC---
Confidence            35677885 5688655544332   38889887654211111 11111   13357786 677665 555    455   


Q ss_pred             cCcccEEEEEEcCCCCcc-cCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc------
Q psy463          327 VDSWDHLTFIDLDDQAGI-KDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE------  399 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~-~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~------  399 (790)
                           .|.++|+..+... .......++.....+. ...|+++++.|+..+.++     .++..+...  ..+.      
T Consensus       683 -----~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~-~v~~s~~~~~lasgs~D~-----~v~iw~~~~--~~~~~s~~~~  749 (793)
T PLN00181        683 -----TLKLWDLSMSISGINETPLHSFMGHTNVKN-FVGLSVSDGYIATGSETN-----EVFVYHKAF--PMPVLSYKFK  749 (793)
T ss_pred             -----EEEEEeCCCCccccCCcceEEEcCCCCCee-EEEEcCCCCEEEEEeCCC-----EEEEEECCC--CCceEEEecc
Confidence                 5778887532100 0001233443332222 378999998776666553     333333322  1100      


Q ss_pred             ---eeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          400 ---CITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       400 ---~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                         .+.. + ........+..+.|++++..++...
T Consensus       750 ~~~~~~~-~-~~~~~~~~V~~v~ws~~~~~lva~~  782 (793)
T PLN00181        750 TIDPVSG-L-EVDDASQFISSVCWRGQSSTLVAAN  782 (793)
T ss_pred             cCCcccc-c-ccCCCCcEEEEEEEcCCCCeEEEec
Confidence               0000 0 0011234578899999999876553

>KOG0272|consensus

Probab=98.05  E-value=0.00019  Score=71.65  Aligned_cols=152  Identities=10%  Similarity=0.052  Sum_probs=90.7

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .....+..++|.|+|+++....-+..   -.+.|+.++..- |..+ +  .. ....+.+|.|||.-++ +.+.    +.
T Consensus       259 gH~~RVs~VafHPsG~~L~TasfD~t---WRlWD~~tk~El-L~QE-G--Hs-~~v~~iaf~~DGSL~~-tGGl----D~  325 (459)
T KOG0272|consen  259 GHLARVSRVAFHPSGKFLGTASFDST---WRLWDLETKSEL-LLQE-G--HS-KGVFSIAFQPDGSLAA-TGGL----DS  325 (459)
T ss_pred             cchhhheeeeecCCCceeeecccccc---hhhcccccchhh-Hhhc-c--cc-cccceeEecCCCceee-ccCc----cc
Confidence            56677889999999996665544432   345566666432 2222 1  11 1256899999998544 4442    12


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                            +.  .++|+.+|.     ..-.|..+..++.+ +.|||+|-.|+-.+.++.   -+||.+.-..      ++..
T Consensus       326 ------~~--RvWDlRtgr-----~im~L~gH~k~I~~-V~fsPNGy~lATgs~Dnt---~kVWDLR~r~------~ly~  382 (459)
T KOG0272|consen  326 ------LG--RVWDLRTGR-----CIMFLAGHIKEILS-VAFSPNGYHLATGSSDNT---CKVWDLRMRS------ELYT  382 (459)
T ss_pred             ------hh--heeecccCc-----EEEEecccccceee-EeECCCceEEeecCCCCc---EEEeeecccc------ccee
Confidence                  22  356887776     34456555555655 899999976666555543   5666553221      1211


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~  435 (790)
                          .+.....++.+.|+|++.+++.+++-.+
T Consensus       383 ----ipAH~nlVS~Vk~~p~~g~fL~TasyD~  410 (459)
T KOG0272|consen  383 ----IPAHSNLVSQVKYSPQEGYFLVTASYDN  410 (459)
T ss_pred             ----cccccchhhheEecccCCeEEEEcccCc
Confidence                1114456778999997666666655544

>KOG0772|consensus

Probab=98.04  E-value=0.00035  Score=71.56  Aligned_cols=278  Identities=13%  Similarity=0.129  Sum_probs=132.3

Q ss_pred             cCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCC
Q psy463          118 SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGS  197 (790)
Q Consensus       118 pdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (790)
                      +.|.+++-....+...+.-+-|+.-..+-.+|+++=..-. +..++|..-+.+..+.+.|.+.++. |+.++.+      
T Consensus       164 ~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~-~~fr~l~P~E~h~i~sl~ys~Tg~~-iLvvsg~------  235 (641)
T KOG0772|consen  164 KHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASM-RSFRQLQPCETHQINSLQYSVTGDQ-ILVVSGS------  235 (641)
T ss_pred             cCCceEEEEeeecCCCceeeeccccceEEEEecccccccc-hhhhccCcccccccceeeecCCCCe-EEEEecC------
Confidence            3444444333333333333444445567777776532111 2256676667778888899887665 4444432      


Q ss_pred             CCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEE
Q psy463          198 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCS  277 (790)
Q Consensus       198 ~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~  277 (790)
                            .+.-++|-+|-+.      .....||.=+.+.-..    ...-..++...|.|+.+-.+.+.......+||-++
T Consensus       236 ------aqakl~DRdG~~~------~e~~KGDQYI~Dm~nT----KGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~  299 (641)
T KOG0772|consen  236 ------AQAKLLDRDGFEI------VEFSKGDQYIRDMYNT----KGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVN  299 (641)
T ss_pred             ------cceeEEccCCcee------eeeeccchhhhhhhcc----CCceeeeeccccccCcccceEEecCCCcEEEEecC
Confidence                  2333333333211      0000111111100000    02233456788999999333332222333344443


Q ss_pred             CCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCC--CcccccCC
Q psy463          278 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK--VPVPLTRG  355 (790)
Q Consensus       278 ~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~--~~~~lt~~  355 (790)
                      -. .+...++.....++-.-+...-.|+|||+.|+ ..-    .+|        -|-.++..+-.  .+.  ..+.--..
T Consensus       300 ~~-k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iA-agc----~DG--------SIQ~W~~~~~~--v~p~~~vk~AH~~  363 (641)
T KOG0772|consen  300 NT-KSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIA-AGC----LDG--------SIQIWDKGSRT--VRPVMKVKDAHLP  363 (641)
T ss_pred             Cc-hhheeEEeeccCCCcccCceeeecCCCcchhh-hcc----cCC--------ceeeeecCCcc--cccceEeeeccCC
Confidence            22 22233433322233222345788999999987 333    466        24444532111  000  00110001


Q ss_pred             CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463          356 RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       356 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~  435 (790)
                      .-++.. +.||+||++|+-.+.++.   -.||-+.--   .++-..-.+|.    ....-....||||.+.|+...+.+.
T Consensus       364 g~~Its-i~FS~dg~~LlSRg~D~t---LKvWDLrq~---kkpL~~~tgL~----t~~~~tdc~FSPd~kli~TGtS~~~  432 (641)
T KOG0772|consen  364 GQDITS-ISFSYDGNYLLSRGFDDT---LKVWDLRQF---KKPLNVRTGLP----TPFPGTDCCFSPDDKLILTGTSAPN  432 (641)
T ss_pred             CCceeE-EEeccccchhhhccCCCc---eeeeecccc---ccchhhhcCCC----ccCCCCccccCCCceEEEecccccC
Confidence            113344 889999997766655543   455544321   11111111111    1223345689999998877665554


Q ss_pred             ---CCeEEEEecCC
Q psy463          436 ---IPEIMLFDKTG  446 (790)
Q Consensus       436 ---~~~i~~~~~~~  446 (790)
                         .+.|+.+|..+
T Consensus       433 ~~~~g~L~f~d~~t  446 (641)
T KOG0772|consen  433 GMTAGTLFFFDRMT  446 (641)
T ss_pred             CCCCceEEEEeccc
Confidence               66788887655

>KOG4497|consensus

Probab=98.01  E-value=0.00036  Score=67.43  Aligned_cols=108  Identities=13%  Similarity=0.203  Sum_probs=72.9

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      +.....+..+||+|..+++..+.. -.+.+++.|+..-+...+....      ++...+.|.|.-..+++..       |
T Consensus       316 nPk~g~g~lafs~Ds~y~aTrnd~-~PnalW~Wdlq~l~l~avLiQk------~piraf~WdP~~prL~vct-------g  381 (447)
T KOG4497|consen  316 NPKCGAGKLAFSCDSTYAATRNDK-YPNALWLWDLQNLKLHAVLIQK------HPIRAFEWDPGRPRLVVCT-------G  381 (447)
T ss_pred             CcccccceeeecCCceEEeeecCC-CCceEEEEechhhhhhhhhhhc------cceeEEEeCCCCceEEEEc-------C
Confidence            335667889999999966544322 2345899998876655444332      1356799999999998543       3


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                            ..+||.+.+.+-.      ...+....+.+.. +.|..+|..++..+.+
T Consensus       382 ------~srLY~W~psg~~------~V~vP~~GF~i~~-l~W~~~g~~i~l~~kD  423 (447)
T KOG4497|consen  382 ------KSRLYFWAPSGPR------VVGVPKKGFNIQK-LQWLQPGEFIVLCGKD  423 (447)
T ss_pred             ------CceEEEEcCCCce------EEecCCCCceeee-EEecCCCcEEEEEcCC
Confidence                  4589999876633      3334443466655 8999999988777655

>KOG0273|consensus

Probab=98.01  E-value=0.0025  Score=64.82  Aligned_cols=148  Identities=10%  Similarity=0.099  Sum_probs=91.4

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCE---------EEE
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKK---------MLL  313 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~---------i~~  313 (790)
                      ...+.+..+.|-|-|++++..+.+.+   +-+.....+.+ ..|....     .+ ...+.|||+|.-         |+ 
T Consensus       357 GH~g~V~alk~n~tg~LLaS~SdD~T---lkiWs~~~~~~~~~l~~Hs-----ke-i~t~~wsp~g~v~~n~~~~~~l~-  426 (524)
T KOG0273|consen  357 GHHGEVNALKWNPTGSLLASCSDDGT---LKIWSMGQSNSVHDLQAHS-----KE-IYTIKWSPTGPVTSNPNMNLMLA-  426 (524)
T ss_pred             cccCceEEEEECCCCceEEEecCCCe---eEeeecCCCcchhhhhhhc-----cc-eeeEeecCCCCccCCCcCCceEE-
Confidence            56677889999999996666554432   33443222222 2221110     01 236788888762         22 


Q ss_pred             EEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          314 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      .++    .++        .+-++|+..+.     ....++++...|.. +++||+|++++.-+.++.   .+||....  
T Consensus       427 sas----~ds--------tV~lwdv~~gv-----~i~~f~kH~~pVys-vafS~~g~ylAsGs~dg~---V~iws~~~--  483 (524)
T KOG0273|consen  427 SAS----FDS--------TVKLWDVESGV-----PIHTLMKHQEPVYS-VAFSPNGRYLASGSLDGC---VHIWSTKT--  483 (524)
T ss_pred             Eee----cCC--------eEEEEEccCCc-----eeEeeccCCCceEE-EEecCCCcEEEecCCCCe---eEeccccc--
Confidence            332    233        57788988876     35568888777766 899999998888776644   56665433  


Q ss_pred             CCCC-cceeeecccccCCCcccEEEEEEecCCcEEEEEeecC
Q psy463          394 PTAT-PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGP  434 (790)
Q Consensus       394 ~~~~-~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~  434 (790)
                        ++ .++..        +.+.++.+.|+.+|.++....+..
T Consensus       484 --~~l~~s~~--------~~~~Ifel~Wn~~G~kl~~~~sd~  515 (524)
T KOG0273|consen  484 --GKLVKSYQ--------GTGGIFELCWNAAGDKLGACASDG  515 (524)
T ss_pred             --hheeEeec--------CCCeEEEEEEcCCCCEEEEEecCC
Confidence              22 22222        467789999999999887765443

>PTZ00420 coronin; Provisional

Probab=97.97  E-value=0.0096  Score=65.70  Aligned_cols=121  Identities=10%  Similarity=0.085  Sum_probs=72.0

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      .....+..+.|+|++. +++....+.   .|.++|+.+++........      .......|+|||+.|+ ..+    .+
T Consensus       123 gH~~~V~sVaf~P~g~~iLaSgS~Dg---tIrIWDl~tg~~~~~i~~~------~~V~SlswspdG~lLa-t~s----~D  188 (568)
T PTZ00420        123 GHKKKISIIDWNPMNYYIMCSSGFDS---FVNIWDIENEKRAFQINMP------KKLSSLKWNIKGNLLS-GTC----VG  188 (568)
T ss_pred             cCCCcEEEEEECCCCCeEEEEEeCCC---eEEEEECCCCcEEEEEecC------CcEEEEEECCCCCEEE-EEe----cC
Confidence            3456688999999998 444443332   3888899887654322211      1245789999999776 444    34


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE----eEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV----TEILAWDEKENNVYFLSTQGSPIVQHMYRINIA  392 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~----~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~  392 (790)
                      +        .|.++|+.+++     ....+..+...+    .....+++|++.|+-.+..+. ..+.|...++.
T Consensus       189 ~--------~IrIwD~Rsg~-----~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~-~~R~VkLWDlr  248 (568)
T PTZ00420        189 K--------HMHIIDPRKQE-----IASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKN-NMREMKLWDLK  248 (568)
T ss_pred             C--------EEEEEECCCCc-----EEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCC-CccEEEEEECC
Confidence            4        68899998776     123333322211    111245688887776665531 12456666665

>KOG0275|consensus

Probab=97.97  E-value=0.00019  Score=68.87  Aligned_cols=124  Identities=7%  Similarity=0.151  Sum_probs=78.3

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      ....++..+.+++||. ++..++.+.    +.+++..+++|..-+...+..-   ...+...-|....-+++++    +.
T Consensus       346 GHsSyvn~a~ft~dG~~iisaSsDgt----vkvW~~KtteC~~Tfk~~~~d~---~vnsv~~~PKnpeh~iVCN----rs  414 (508)
T KOG0275|consen  346 GHSSYVNEATFTDDGHHIISASSDGT----VKVWHGKTTECLSTFKPLGTDY---PVNSVILLPKNPEHFIVCN----RS  414 (508)
T ss_pred             CccccccceEEcCCCCeEEEecCCcc----EEEecCcchhhhhhccCCCCcc---cceeEEEcCCCCceEEEEc----CC
Confidence            4556788899999999 554444443    8888888888866555433111   1234444555443332444    32


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeE--EEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTE--ILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE  399 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~  399 (790)
                              +.+|++++.+.-      .+..+.|..+-..  ....||.|.++|-.+.+     ..||-++..+  |+.+
T Consensus       415 --------ntv~imn~qGQv------VrsfsSGkREgGdFi~~~lSpkGewiYcigED-----~vlYCF~~~s--G~LE  472 (508)
T KOG0275|consen  415 --------NTVYIMNMQGQV------VRSFSSGKREGGDFINAILSPKGEWIYCIGED-----GVLYCFSVLS--GKLE  472 (508)
T ss_pred             --------CeEEEEeccceE------EeeeccCCccCCceEEEEecCCCcEEEEEccC-----cEEEEEEeec--Ccee
Confidence                    368999987765      6667765432211  14679999999998777     6788887766  4443

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=97.95  E-value=0.00041  Score=77.57  Aligned_cols=227  Identities=14%  Similarity=0.167  Sum_probs=124.6

Q ss_pred             EEEEeeCCCCeeeEE-EeecCCCCccccCCccccccCCceEEE-EeecC--CCCCCCCCCcCCcEEEEEEcCCcCCccCC
Q psy463           84 RITRCSINEGTCDVV-FSRDLDRGWFEPFDHLRFSSDGKKMLL-ILSHN--QESDGSTPVDSWDHLTFIDLDDQAGIKDK  159 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~i~~-~~~~~--~~~~~~~~~g~~~~l~~~~~~~~~~~~~~  159 (790)
                      .+.+.|..+...+.+ ....      .....|.|||||++|+| ++...  +          ...||+-+|.+.....  
T Consensus       330 ~L~~~D~dG~n~~~ve~~~~------~~i~sP~~SPDG~~vAY~ts~e~~~g----------~s~vYv~~L~t~~~~~--  391 (912)
T TIGR02171       330 NLAYIDYTKGASRAVEIEDT------ISVYHPDISPDGKKVAFCTGIEGLPG----------KSSVYVRNLNASGSGL--  391 (912)
T ss_pred             eEEEEecCCCCceEEEecCC------CceecCcCCCCCCEEEEEEeecCCCC----------CceEEEEehhccCCCc--
Confidence            566666666555554 2211      12246999999999999 55433  2          2379999987653211  


Q ss_pred             cceeccccceEEEEEEeeeccCCccEEEEecccCCCCC-CCccccceeEEEecCCcccccCcCCccccccccc-------
Q psy463          160 VPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGS-TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT-------  231 (790)
Q Consensus       160 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~-------  231 (790)
                      ++-.+-   .-.+..+.+.+.++..|+|++....+... .+.  ...-|.+.++.|+   ..+|+.|-.|.++       
T Consensus       392 vkl~ve---~aaiprwrv~e~gdt~ivyv~~a~nn~d~~~~~--~~stw~v~f~~gk---fg~p~kl~dga~hggvs~~~  463 (912)
T TIGR02171       392 VKLPVE---NAAIPRWRVLENGDTVIVYVSDASNNKDDATFA--AYSTWQVPFANGK---FGTPKKLFDGAYHGGVSEDL  463 (912)
T ss_pred             eEeecc---cccccceEecCCCCeEEEEEcCCCCCcchhhhh--hcceEEEEecCCC---CCCchhhhccccccccccCC
Confidence            111111   11222345567777789999987654422 222  1466888888763   2336666654444       


Q ss_pred             ---------eeehhhcccCCC------CCCCEEEEEEEccCCc-EEEEEeccC------------cceEEEEEECCCCce
Q psy463          232 ---------VTEILAWDEKEN------NVEPVLSRVNWANESV-VAAWVNRVQ------------NRARITRCSINEGTC  283 (790)
Q Consensus       232 ---------~~~~~~~~~~~~------~~~~~~~~~~wspDg~-~~~~~~r~~------------~~~~i~~~~~~~g~~  283 (790)
                               ++++++-.....      -......+++.+.||. ...+.+-+.            .+.+|.+.|..+.-.
T Consensus       464 ~lavtga~llr~~~~~~~~~~~~~~vwyn~eqacn~sl~~d~~~rt~fldfgg~tg~~fvg~~y~~he~~lvads~gklv  543 (912)
T TIGR02171       464 NLAVSGARLLRAHVANEDVDNGKDDVWYNGEQACNASLAKDGSKRTLFLDFGGSTGQAFVGQKYGVHERLLVADSKGKLV  543 (912)
T ss_pred             ceeeehhhHhhhhhcccccccCccceeecchhccchhhhccCCcceEEEecCCccchhhccccccceeEEEEecCCCchh
Confidence                     222221100000      0112236788888987 555544322            124677777655444


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEE-EEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKML-LILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG  355 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~-~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~  355 (790)
                      +.+-...+   +.  +....|--+.+.++ .+..   +.+|.     ...|.++++..++      +..|..|
T Consensus       544 ~~v~ap~g---yt--fdh~ew~~~~~~~~vatl~---n~~g~-----h~ki~lv~~~~~~------i~~l~eg  597 (912)
T TIGR02171       544 RAVAAPAG---YT--FDHTEWVTGRSNLAVATLT---NVNGA-----HKKIALINLSDSK------VTELVEG  597 (912)
T ss_pred             hhccCCCC---cc--ccchhhhcCCCceEEEEee---cCCCc-----cceEEEEEcCCCc------eEEeecc
Confidence            44443322   21  33455766534443 2344   56774     7899999999887      7777655

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=97.94  E-value=1.1e-05  Score=53.66  Aligned_cols=29  Identities=17%  Similarity=0.267  Sum_probs=24.4

Q ss_pred             cCCceeEeCCCCCceEEEEecC--CceeEEE
Q psy463            8 SSSSALWFSPSGNNLAYASFDD--NRTVIMT   36 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~--~~~~~~~   36 (790)
                      +.+..|.||||||+|+|++.+.  |..+||+
T Consensus         9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy~   39 (39)
T PF07676_consen    9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIYV   39 (39)
T ss_dssp             SSEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred             ccccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence            3568899999999999999998  8888874

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]

Probab=97.94  E-value=0.00047  Score=71.09  Aligned_cols=74  Identities=19%  Similarity=0.208  Sum_probs=60.9

Q ss_pred             hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cc---hHHHHHHHHHHHHhhC
Q psy463          715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VR---PHFYHTLERFLDSCFA  790 (790)
Q Consensus       715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~---~~~~~~i~~fl~~~l~  790 (790)
                      .+...+..+..+|+|++||..|..||...+..+++.....  +.+...+++++|.... ..   .+.+..+.+||.++|.
T Consensus       222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l~  299 (299)
T COG1073         222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHLL  299 (299)
T ss_pred             cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhcC
Confidence            3446677772379999999999999999999999998875  5688889999998885 32   3789999999998763

>KOG2100|consensus

Probab=97.93  E-value=0.00056  Score=78.49  Aligned_cols=193  Identities=34%  Similarity=0.597  Sum_probs=140.8

Q ss_pred             CccceeecCCceeEeCCCCCceEEEEecCCceeEEEecccCCC-----------------CCCCc--------------C
Q psy463            1 MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNP-----------------GHPSS--------------Q   49 (790)
Q Consensus         1 ~~~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~-----------------~~~~~--------------~   49 (790)
                      +|+||++....+.||||||..+||++.++..++.+.++..++.                 ++.+.              .
T Consensus       200 ~yeeEv~~~~~a~wwsp~g~~la~~~~~dt~V~~~~~~~~~~~~~yp~~~~~~ypk~g~~np~v~l~v~~~~~~~~~~~~  279 (755)
T KOG2100|consen  200 IYEEEVLSSDSAIWWSPDGDRLAYASFNDTKVETINLPGYTDDDQYPKSTNFHYPKAGAPNPAVSLFVVDLHDPPRLGIP  279 (755)
T ss_pred             eeehhhcccCccceeCCCCceeEEEEecccccceEEeccccccccCcccceeecCCCCCCCCeEEEEEEeCCCceeeccC
Confidence            6999999999999999999999999998887766666555443                 22211              1


Q ss_pred             CCccccCCCCccccccCCCcc-eeEeeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCC-ccccccCCceEEEEe
Q psy463           50 YTQAINLREPVLSRVNWANES-VVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFD-HLRFSSDGKKMLLIL  127 (790)
Q Consensus        50 ~~~~~~~~~~~~~~~~w~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~i~~~~  127 (790)
                      .+...+...++...+.|..+. ..+.|++|.|+...+.+|+.+ +.|+..++..+..+|+.... .|.++.|+....+..
T Consensus       280 ~~~~~~~~~~~~~~~~W~~~~~~~~~~~~r~~~~~~~~~cd~~-~~~~~~~~~~~~~~W~~~~~~~~~~~~d~~~~~~~~  358 (755)
T KOG2100|consen  280 PPTNQRSGEYYVTNVKWDTTEKVLVVWTNREQNISVETLCDTP-GICRVVYEESSDGGWVEHQNVEPVFSSDGSSYLKVD  358 (755)
T ss_pred             CccccccCceEEEEEEEecCccEEEEEEccCCCeeeeEEecCc-ccceeeEeccccccccccccccceEeecCCceeEEE
Confidence            111222334445566787554 466999999999999999999 99998888765558997665 689999997766665


Q ss_pred             ecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeE
Q psy463          128 SHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLT  207 (790)
Q Consensus       128 ~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  207 (790)
                      ....+.        +.|+..+...++.     ....+|.|.|++..+.+++ ...+.++|.+.. ..      ....+||
T Consensus       359 ~~~~~~--------~~hi~~~~~~~~~-----~~~~lt~g~w~v~~i~~~~-~~~~~i~f~~~~-~~------~~~~~ly  417 (755)
T KOG2100|consen  359 SVSDGG--------YNHIAYLKLSNGS-----EPRMLTSGNWEVTSILGYD-KDSNRIYFDAYE-ED------PSERHLY  417 (755)
T ss_pred             eeccCC--------EEEEEEEEcCCCC-----ccccccccceEEEEecccc-CCCceEEEEecC-CC------CCceEEE
Confidence            544321        5699999887762     3678999999999999999 444435555442 21      2347999


Q ss_pred             EEecCCcc
Q psy463          208 FIDLDDQA  215 (790)
Q Consensus       208 ~~~~~~~~  215 (790)
                      .+++.+..
T Consensus       418 ~i~~~~~~  425 (755)
T KOG2100|consen  418 SISLGSGT  425 (755)
T ss_pred             EEEccccc
Confidence            99998876

>KOG1553|consensus

Probab=97.93  E-value=7.8e-05  Score=72.54  Aligned_cols=133  Identities=16%  Similarity=0.147  Sum_probs=91.4

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC-hh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK-GN  549 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~-g~  549 (790)
                      +..++.+.||.+|..+.+.-..-.  .+.+.-+|+..-|..+-.++      .....-+ +.||.|+-.+.+|.+++ |-
T Consensus       215 ~R~kiks~dgneiDtmF~d~r~n~--~~ngq~LvIC~EGNAGFYEv------G~m~tP~-~lgYsvLGwNhPGFagSTG~  285 (517)
T KOG1553|consen  215 QRLKIKSSDGNEIDTMFLDGRPNQ--SGNGQDLVICFEGNAGFYEV------GVMNTPA-QLGYSVLGWNHPGFAGSTGL  285 (517)
T ss_pred             eEEEEeecCCcchhheeecCCCCC--CCCCceEEEEecCCccceEe------eeecChH-HhCceeeccCCCCccccCCC
Confidence            345667778888887766433111  23445688888887765332      2222222 26999999999986653 22


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                      ++.        ..+.....+.+++.+..++ .-.+.|+++|||.||+.++++|..+|  .++++|+-+...|+.
T Consensus       286 P~p--------~n~~nA~DaVvQfAI~~Lg-f~~edIilygWSIGGF~~~waAs~YP--dVkavvLDAtFDDll  348 (517)
T KOG1553|consen  286 PYP--------VNTLNAADAVVQFAIQVLG-FRQEDIILYGWSIGGFPVAWAASNYP--DVKAVVLDATFDDLL  348 (517)
T ss_pred             CCc--------ccchHHHHHHHHHHHHHcC-CCccceEEEEeecCCchHHHHhhcCC--CceEEEeecchhhhh
Confidence            221        2445555567788887666 55678999999999999999999998  588999888876654

>KOG0305|consensus

Probab=97.93  E-value=0.00097  Score=70.47  Aligned_cols=117  Identities=12%  Similarity=0.071  Sum_probs=75.5

Q ss_pred             CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ..-+-.++|+|=-+ +++. ..+.....|...+..+|+........      .+.-+..||+..+.|+....     .+ 
T Consensus       343 ~aAVKA~awcP~q~~lLAs-GGGs~D~~i~fwn~~~g~~i~~vdtg------sQVcsL~Wsk~~kEi~sthG-----~s-  409 (484)
T KOG0305|consen  343 TAAVKALAWCPWQSGLLAT-GGGSADRCIKFWNTNTGARIDSVDTG------SQVCSLIWSKKYKELLSTHG-----YS-  409 (484)
T ss_pred             ceeeeEeeeCCCccCceEE-cCCCcccEEEEEEcCCCcEecccccC------CceeeEEEcCCCCEEEEecC-----CC-
Confidence            33455778888777 4444 33344455888888888664332221      12568999999999984332     12 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~  389 (790)
                           ..+|.+++..+-+     ....++.+...+.. ++|+|||..|+..+.+..   -++|.+
T Consensus       410 -----~n~i~lw~~ps~~-----~~~~l~gH~~RVl~-la~SPdg~~i~t~a~DET---lrfw~~  460 (484)
T KOG0305|consen  410 -----ENQITLWKYPSMK-----LVAELLGHTSRVLY-LALSPDGETIVTGAADET---LRFWNL  460 (484)
T ss_pred             -----CCcEEEEeccccc-----eeeeecCCcceeEE-EEECCCCCEEEEecccCc---EEeccc
Confidence                 4466666665544     25567777666655 899999999988887754   455544

>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family

Probab=97.87  E-value=7e-05  Score=84.26  Aligned_cols=101  Identities=18%  Similarity=0.157  Sum_probs=63.4

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH-hh---------hh---------ccC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK-YA---------GY---------RRL  559 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~-~~---------~~---------~~~  559 (790)
                      .+.|+|+++||..+..   ..|.  .....++++||.|+++|++|+|.+..... ..         .+         ++-
T Consensus       447 ~g~P~VVllHG~~g~~---~~~~--~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn  521 (792)
T TIGR03502       447 DGWPVVIYQHGITGAK---ENAL--AFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDN  521 (792)
T ss_pred             CCCcEEEEeCCCCCCH---HHHH--HHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccC
Confidence            4568999999988762   3333  23334455799999999999887633200 00         01         001


Q ss_pred             CccchhHHHHHHHHHH------Hh---CCCcCCCceEEEEechHHHHHHHHHhc
Q psy463          560 GTVEIYDQINVTRYLQ------EN---LPYIDKTRTAIWGWSYGGYATGLALAL  604 (790)
Q Consensus       560 ~~~~~~D~~~~~~~l~------~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~  604 (790)
                      -.+.+.|+......+.      ..   .+..+..++.++||||||.++..++..
T Consensus       522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~  575 (792)
T TIGR03502       522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY  575 (792)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence            1133566665555554      11   112556799999999999999998874

Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae

>KOG2139|consensus

Probab=97.87  E-value=0.00063  Score=66.74  Aligned_cols=161  Identities=14%  Similarity=0.178  Sum_probs=96.0

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .+..+++...|.+||..+...+-++  ..|.+.|+++|.+..|..... .    ......|||||.+|+ .+.    -++
T Consensus       193 pgh~pVtsmqwn~dgt~l~tAS~gs--ssi~iWdpdtg~~~pL~~~gl-g----g~slLkwSPdgd~lf-aAt----~da  260 (445)
T KOG2139|consen  193 PGHNPVTSMQWNEDGTILVTASFGS--SSIMIWDPDTGQKIPLIPKGL-G----GFSLLKWSPDGDVLF-AAT----CDA  260 (445)
T ss_pred             CCCceeeEEEEcCCCCEEeecccCc--ceEEEEcCCCCCcccccccCC-C----ceeeEEEcCCCCEEE-Eec----ccc
Confidence            4456789999999999444433322  238899999999888773221 1    145789999999886 444    334


Q ss_pred             CCCcCcccEEEEEE-cCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc---
Q psy463          324 STPVDSWDHLTFID-LDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE---  399 (790)
Q Consensus       324 ~~~~~~~~~l~~~d-~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---  399 (790)
                            -..||.-. .-+.+      .-.+..+  .+.. ..|+|+|+.|.|.... .   ..||++...+......   
T Consensus       261 ------vfrlw~e~q~wt~e------rw~lgsg--rvqt-acWspcGsfLLf~~sg-s---p~lysl~f~~~~~~~~~~~  321 (445)
T KOG2139|consen  261 ------VFRLWQENQSWTKE------RWILGSG--RVQT-ACWSPCGSFLLFACSG-S---PRLYSLTFDGEDSVFLRPQ  321 (445)
T ss_pred             ------eeeeehhcccceec------ceeccCC--ceee-eeecCCCCEEEEEEcC-C---ceEEEEeecCCCccccCcc
Confidence                  12344211 11121      2223333  4444 6899999999988764 2   5788887655322111   


Q ss_pred             ---e--eeeccc--ccCCC----cccEEEEEEecCCcEEEEEeecCC
Q psy463          400 ---C--ITCDLL--TSANQ----KCSYSGATFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       400 ---~--lt~~~~--~~~~~----~~~~~~~~~s~dg~~~~~~~~~~~  435 (790)
                         .  +..++.  +.-.+    -+.....+|.|.|.|++..+.+..
T Consensus       322 ~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~  368 (445)
T KOG2139|consen  322 SIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQS  368 (445)
T ss_pred             cceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCc
Confidence               1  111110  00012    235567899999999999887765

>KOG1445|consensus

Probab=97.87  E-value=0.00014  Score=75.97  Aligned_cols=123  Identities=13%  Similarity=0.194  Sum_probs=71.5

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      +....+..++|||||+.++.+-.+.   .|.++...+++ +.+.+..+.-+  .....+.|..||+.++.+.-   ++..
T Consensus       718 gHtdqIf~~AWSpdGr~~AtVcKDg---~~rVy~Prs~e-~pv~Eg~gpvg--tRgARi~wacdgr~viv~Gf---dk~S  788 (1012)
T KOG1445|consen  718 GHTDQIFGIAWSPDGRRIATVCKDG---TLRVYEPRSRE-QPVYEGKGPVG--TRGARILWACDGRIVIVVGF---DKSS  788 (1012)
T ss_pred             cCcCceeEEEECCCCcceeeeecCc---eEEEeCCCCCC-CccccCCCCcc--CcceeEEEEecCcEEEEecc---cccc
Confidence            5667788999999999666554433   27787776654 33444322111  11346899999998875444   3444


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE---eEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV---TEILAWDEKENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~---~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                            ..+|-++++.+=.      .+.|-....++   .-.+.+++|...| |.+..|+   +.+|.+.+
T Consensus       789 ------eRQv~~Y~Aq~l~------~~pl~t~~lDvaps~LvP~YD~Ds~~l-fltGKGD---~~v~~yEv  843 (1012)
T KOG1445|consen  789 ------ERQVQMYDAQTLD------LRPLYTQVLDVAPSPLVPHYDYDSNVL-FLTGKGD---RFVNMYEV  843 (1012)
T ss_pred             ------hhhhhhhhhhhcc------CCcceeeeecccCccccccccCCCceE-EEecCCC---ceEEEEEe
Confidence                  5677777765422      22332221222   1247789998754 5555544   45555544

>KOG0263|consensus

Probab=97.86  E-value=0.00042  Score=74.81  Aligned_cols=109  Identities=17%  Similarity=0.203  Sum_probs=75.2

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      +.-+.+.|++.+++.-+.   ...+-+.|..+|.+.+++..     ..++....+|||+|++|+ +..    .+|     
T Consensus       538 V~cv~FHPNs~Y~aTGSs---D~tVRlWDv~~G~~VRiF~G-----H~~~V~al~~Sp~Gr~La-Sg~----ed~-----  599 (707)
T KOG0263|consen  538 VDCVSFHPNSNYVATGSS---DRTVRLWDVSTGNSVRIFTG-----HKGPVTALAFSPCGRYLA-SGD----EDG-----  599 (707)
T ss_pred             cceEEECCcccccccCCC---CceEEEEEcCCCcEEEEecC-----CCCceEEEEEcCCCceEe-ecc----cCC-----
Confidence            445889999987665422   23488889999999999853     223456899999999998 554    556     


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEE
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMY  387 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~  387 (790)
                         .|-++|+.+++     ...++-.+...+. .+.||.||..|+..+.+..   ..||
T Consensus       600 ---~I~iWDl~~~~-----~v~~l~~Ht~ti~-SlsFS~dg~vLasgg~Dns---V~lW  646 (707)
T KOG0263|consen  600 ---LIKIWDLANGS-----LVKQLKGHTGTIY-SLSFSRDGNVLASGGADNS---VRLW  646 (707)
T ss_pred             ---cEEEEEcCCCc-----chhhhhcccCcee-EEEEecCCCEEEecCCCCe---EEEE
Confidence               68889998877     2445544443344 3889999996666555532   5555

>KOG3253|consensus

Probab=97.85  E-value=0.00023  Score=74.67  Aligned_cols=51  Identities=12%  Similarity=0.141  Sum_probs=43.8

Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                      +.+-.+ +.|+|++.|.+|..|++...+++.+.+++.   ++++++.+++|.+..
T Consensus       298 E~Lldm-k~PVLFV~Gsnd~mcspn~ME~vreKMqA~---~elhVI~~adhsmai  348 (784)
T KOG3253|consen  298 EALLDM-KQPVLFVIGSNDHMCSPNSMEEVREKMQAE---VELHVIGGADHSMAI  348 (784)
T ss_pred             hhhHhc-CCceEEEecCCcccCCHHHHHHHHHHhhcc---ceEEEecCCCccccC
Confidence            445566 899999999999999999999998888764   689999999998864

>KOG1274|consensus

Probab=97.84  E-value=0.0042  Score=68.57  Aligned_cols=160  Identities=16%  Similarity=0.208  Sum_probs=98.1

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...+..++++-+|++++....+   ..|.+++..++.....+..     ...+.....|+|.|+.|+. .+    -+|  
T Consensus        96 tlp~r~~~v~g~g~~iaagsdD---~~vK~~~~~D~s~~~~lrg-----h~apVl~l~~~p~~~fLAv-ss----~dG--  160 (933)
T KOG1274|consen   96 TLPIRDLAVSGSGKMIAAGSDD---TAVKLLNLDDSSQEKVLRG-----HDAPVLQLSYDPKGNFLAV-SS----CDG--  160 (933)
T ss_pred             eccceEEEEecCCcEEEeecCc---eeEEEEeccccchheeecc-----cCCceeeeeEcCCCCEEEE-Ee----cCc--
Confidence            3446678999999966554332   2377888777655444432     1123567899999998884 33    467  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccC----CC---eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTR----GR---FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP  398 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~----~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~  398 (790)
                            .|+++++..+..     ...|+.    .+   -.+...++|+|+|..+++...++.   ..+|  +.++  ++.
T Consensus       161 ------~v~iw~~~~~~~-----~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~---Vkvy--~r~~--we~  222 (933)
T KOG1274|consen  161 ------KVQIWDLQDGIL-----SKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT---VKVY--SRKG--WEL  222 (933)
T ss_pred             ------eEEEEEcccchh-----hhhcccCCccccccccceeeeeeecCCCCeEEeeccCCe---EEEE--ccCC--cee
Confidence                  788999887751     222322    11   122345899999988888877733   4444  4444  222


Q ss_pred             -ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          399 -ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       399 -~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                       ..|....     ....+....|||.|+||+.+.-   ..+|.+++.++
T Consensus       223 ~f~Lr~~~-----~ss~~~~~~wsPnG~YiAAs~~---~g~I~vWnv~t  263 (933)
T KOG1274|consen  223 QFKLRDKL-----SSSKFSDLQWSPNGKYIAASTL---DGQILVWNVDT  263 (933)
T ss_pred             heeecccc-----cccceEEEEEcCCCcEEeeecc---CCcEEEEeccc
Confidence             1222211     1223778999999999987632   45577777663

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.83  E-value=0.031  Score=56.26  Aligned_cols=248  Identities=13%  Similarity=0.164  Sum_probs=130.8

Q ss_pred             cccceeEEEEeeCCCCeeeEEEeecCC-CCcccc-CCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCC
Q psy463           78 RVQNRARITRCSINEGTCDVVFSRDLD-RGWFEP-FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG  155 (790)
Q Consensus        78 r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~  155 (790)
                      |+...-+++++|..|-....-..++.. +.-... .....+|+|||++++..-...           ..+.++|++.++ 
T Consensus        62 rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa-----------~SVtVVDl~~~k-  129 (342)
T PF06433_consen   62 RGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPA-----------TSVTVVDLAAKK-  129 (342)
T ss_dssp             EEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSS-----------EEEEEEETTTTE-
T ss_pred             cccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCC-----------CeEEEEECCCCc-
Confidence            345556778889888877765565553 322211 123588999999988765433           379999998874 


Q ss_pred             ccCCcceec-cccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecC-CcccccCcCCcccccccccee
Q psy463          156 IKDKVPVPL-TRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLD-DQAGIKDKVPVPLTRGRFTVT  233 (790)
Q Consensus       156 ~~~~~~~~l-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~lt~~~~~~~  233 (790)
                          +...+ +.|   +..++.+.++    - |.+.-  +|        ..+-.+.++ .|+.      .+-.       
T Consensus       130 ----vv~ei~~PG---C~~iyP~~~~----~-F~~lC--~D--------Gsl~~v~Ld~~Gk~------~~~~-------  174 (342)
T PF06433_consen  130 ----VVGEIDTPG---CWLIYPSGNR----G-FSMLC--GD--------GSLLTVTLDADGKE------AQKS-------  174 (342)
T ss_dssp             ----EEEEEEGTS---EEEEEEEETT----E-EEEEE--TT--------SCEEEEEETSTSSE------EEEE-------
T ss_pred             ----eeeeecCCC---EEEEEecCCC----c-eEEEe--cC--------CceEEEEECCCCCE------eEee-------
Confidence                34444 222   2222333222    1 33321  11        355666665 3331      1100       


Q ss_pred             ehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEE------eCCCccc-ccCCceeEc
Q psy463          234 EILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSR------DLDRGWF-EPFDHLRFS  305 (790)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~------~~~~~~~-~~~~~~~~s  305 (790)
                          -.-|....+.....+.++.++. +++.+-.+.    +|.+++.+...+..-.-      +...+|. +...-.+++
T Consensus       175 ----t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~----v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~  246 (342)
T PF06433_consen  175 ----TKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGN----VYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYH  246 (342)
T ss_dssp             ----EEESSTTTS-B-S--EEETTTTEEEEEBTTSE----EEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEE
T ss_pred             ----ccccCCCCcccccccceECCCCeEEEEecCCE----EEEEeccCCcccccCcccccCccccccCcCCcceeeeeec
Confidence                0011112333445677777665 554444443    99999988765433221      1123565 223457888


Q ss_pred             cCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEE
Q psy463          306 SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQH  385 (790)
Q Consensus       306 pDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~  385 (790)
                      +..+.||++- +. ...|.+ -+.-++||++|++++++     ..++.-. ..+. .++.+.|.+-++|..+.+.   ..
T Consensus       247 ~~~~rlyvLM-h~-g~~gsH-KdpgteVWv~D~~t~kr-----v~Ri~l~-~~~~-Si~Vsqd~~P~L~~~~~~~---~~  313 (342)
T PF06433_consen  247 AASGRLYVLM-HQ-GGEGSH-KDPGTEVWVYDLKTHKR-----VARIPLE-HPID-SIAVSQDDKPLLYALSAGD---GT  313 (342)
T ss_dssp             TTTTEEEEEE-EE---TT-T-TS-EEEEEEEETTTTEE-----EEEEEEE-EEES-EEEEESSSS-EEEEEETTT---TE
T ss_pred             cccCeEEEEe-cC-CCCCCc-cCCceEEEEEECCCCeE-----EEEEeCC-Cccc-eEEEccCCCcEEEEEcCCC---Ce
Confidence            8888887543 22 112211 00146999999998872     3444321 1222 3778899887777665543   58


Q ss_pred             EEEEEcCC
Q psy463          386 MYRINIAD  393 (790)
Q Consensus       386 l~~~~~~~  393 (790)
                      |++++..+
T Consensus       314 l~v~D~~t  321 (342)
T PF06433_consen  314 LDVYDAAT  321 (342)
T ss_dssp             EEEEETTT
T ss_pred             EEEEeCcC
Confidence            99999877

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like

Probab=97.83  E-value=0.00043  Score=67.89  Aligned_cols=61  Identities=23%  Similarity=0.278  Sum_probs=50.6

Q ss_pred             CccEEEEecC------CCcccchhhhHHHHHHHHhcCCceEEEEcCC--CCCcCCCcchHHHHHHHHHH
Q psy463          725 DKQYLLVHGT------MDDNVHFQQSMMLAKSLQHADIMFQSQTYPD--EEHGLIGVRPHFYHTLERFL  785 (790)
Q Consensus       725 ~~P~Lii~G~------~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~--~~H~~~~~~~~~~~~i~~fl  785 (790)
                      .+.+|-|.|.      .|-.||...+..+...++......+.+++.|  +.|.-..+..++.+.|.+||
T Consensus       184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~V~~~I~~FL  252 (255)
T PF06028_consen  184 NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQVDKLIIQFL  252 (255)
T ss_dssp             T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHHHHHHHHHHH
T ss_pred             CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHHHHHHHHHHh
Confidence            6889999998      8999999999999888888777777788876  57866657788889999997

; PDB: 3LP5_A 3FLE_A 3DS8_A.

>KOG2919|consensus

Probab=97.81  E-value=0.0024  Score=61.87  Aligned_cols=79  Identities=14%  Similarity=0.137  Sum_probs=44.1

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCC-c-eeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEG-T-CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g-~-~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                      ...+.++.+.|-+||..++.-.|-.++  |-..|+... . ...|-...+++   ..---+...|+|+.|+ ...    .
T Consensus       248 gh~gGvThL~~~edGn~lfsGaRk~dk--Il~WDiR~~~~pv~~L~rhv~~T---NQRI~FDld~~~~~La-sG~----t  317 (406)
T KOG2919|consen  248 GHGGGVTHLQWCEDGNKLFSGARKDDK--ILCWDIRYSRDPVYALERHVGDT---NQRILFDLDPKGEILA-SGD----T  317 (406)
T ss_pred             ccCCCeeeEEeccCcCeecccccCCCe--EEEEeehhccchhhhhhhhccCc---cceEEEecCCCCceee-ccC----C
Confidence            456788999999999977776665544  545554321 1 11111111100   0001355688888776 332    5


Q ss_pred             CCCCCcCcccEEEEEEcCC
Q psy463          322 DGSTPVDSWDHLTFIDLDD  340 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~  340 (790)
                      +|        -|-++|+++
T Consensus       318 dG--------~V~vwdlk~  328 (406)
T KOG2919|consen  318 DG--------SVRVWDLKD  328 (406)
T ss_pred             Cc--------cEEEEecCC
Confidence            66        466777765

>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length

Probab=97.80  E-value=7.2e-05  Score=58.65  Aligned_cols=58  Identities=12%  Similarity=0.036  Sum_probs=43.2

Q ss_pred             CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       480 g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      |.+|.+..+.|++     . ...+|+++||......   .  .......++++||.|+.+|.||+|.+.
T Consensus         1 G~~L~~~~w~p~~-----~-~k~~v~i~HG~~eh~~---r--y~~~a~~L~~~G~~V~~~D~rGhG~S~   58 (79)
T PF12146_consen    1 GTKLFYRRWKPEN-----P-PKAVVVIVHGFGEHSG---R--YAHLAEFLAEQGYAVFAYDHRGHGRSE   58 (79)
T ss_pred             CcEEEEEEecCCC-----C-CCEEEEEeCCcHHHHH---H--HHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence            5678888998874     2 5789999999877632   2  223344556699999999999988765

Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.

>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria

Probab=97.80  E-value=0.0032  Score=65.91  Aligned_cols=78  Identities=21%  Similarity=0.242  Sum_probs=56.1

Q ss_pred             CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHH----HHhCCCcCCCceEEEEechHHHHHHHHHhcCCC
Q psy463          532 KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYL----QENLPYIDKTRTAIWGWSYGGYATGLALALDPS  607 (790)
Q Consensus       532 ~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l----~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~  607 (790)
                      .|.-|+.+.+.-.+.-|             +.+.|+..+...+    .+..+.  ..|..|+|.+.||+.++.+++.+|+
T Consensus        99 ~GHPvYFV~F~p~P~pg-------------QTl~DV~~ae~~Fv~~V~~~hp~--~~kp~liGnCQgGWa~~mlAA~~Pd  163 (581)
T PF11339_consen   99 AGHPVYFVGFFPEPEPG-------------QTLEDVMRAEAAFVEEVAERHPD--APKPNLIGNCQGGWAAMMLAALRPD  163 (581)
T ss_pred             cCCCeEEEEecCCCCCC-------------CcHHHHHHHHHHHHHHHHHhCCC--CCCceEEeccHHHHHHHHHHhcCcC
Confidence            58888887776544333             4567776554443    332342  2389999999999999999999997


Q ss_pred             CceEEEEEeCCCCCccc
Q psy463          608 NVFKCGISVAPVTDWIY  624 (790)
Q Consensus       608 ~~~~~~v~~~~~~~~~~  624 (790)
                      ..--.+++++|++.|..
T Consensus       164 ~~gplvlaGaPlsywaG  180 (581)
T PF11339_consen  164 LVGPLVLAGAPLSYWAG  180 (581)
T ss_pred             ccCceeecCCCcccccC
Confidence            55558888899987763

Their function is unknown.

>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins

Probab=97.79  E-value=0.00028  Score=69.84  Aligned_cols=127  Identities=15%  Similarity=0.183  Sum_probs=82.7

Q ss_pred             CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccc--ccccchHHHHHhcCCeEEEEEcCCCC
Q psy463          467 LPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE--RFSVDWNLYLADNKDIVVAYIDGRNS  544 (790)
Q Consensus       467 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~--~~~~~~~~~~~~~~G~~v~~~d~rG~  544 (790)
                      ......+.+.. |+..|..+.+.-+++     ++-.-|++.-|..+..+...  .....+...++...|..|+.+||||.
T Consensus       109 ~~~~kRv~Iq~-D~~~IDt~~I~~~~a-----~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGV  182 (365)
T PF05677_consen  109 VSSVKRVPIQY-DGVKIDTMAIHQPEA-----KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGV  182 (365)
T ss_pred             ccceeeEEEee-CCEEEEEEEeeCCCC-----CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcc
Confidence            34456666666 899998887753332     22234566666655422100  00112445566667999999999998


Q ss_pred             CCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC
Q psy463          545 ALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP  606 (790)
Q Consensus       545 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p  606 (790)
                      +.+......       ...+.|..+.++||+++...+.+++|++.|||+||.++..++..+.
T Consensus       183 g~S~G~~s~-------~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~  237 (365)
T PF05677_consen  183 GSSTGPPSR-------KDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV  237 (365)
T ss_pred             ccCCCCCCH-------HHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence            764332111       2457788889999987433477899999999999999988776543

>KOG0284|consensus

Probab=97.78  E-value=0.00045  Score=68.77  Aligned_cols=264  Identities=13%  Similarity=0.151  Sum_probs=139.9

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcce----------eEeeeec
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESV----------VAAWVNR   78 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~----------~~~~~~r   78 (790)
                      ....+.|+|+||+|.-.+. .|...+|.--.-        .....+.-++..+..+.|+.++.          +-+|.+.
T Consensus        98 ~V~~v~WtPeGRRLltgs~-SGEFtLWNg~~f--------nFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn  168 (464)
T KOG0284|consen   98 PVNVVRWTPEGRRLLTGSQ-SGEFTLWNGTSF--------NFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPN  168 (464)
T ss_pred             ceeeEEEcCCCceeEeecc-cccEEEecCcee--------eHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccc
Confidence            3456789999999986554 666666654221        12223444455555566654333          2245544


Q ss_pred             ccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccC
Q psy463           79 VQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD  158 (790)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~  158 (790)
                      -+|+..++....                  +.....+|||...+++ +.+.++            -|-+.|.-..+    
T Consensus       169 mnnVk~~~ahh~------------------eaIRdlafSpnDskF~-t~SdDg------------~ikiWdf~~~k----  213 (464)
T KOG0284|consen  169 MNNVKIIQAHHA------------------EAIRDLAFSPNDSKFL-TCSDDG------------TIKIWDFRMPK----  213 (464)
T ss_pred             hhhhHHhhHhhh------------------hhhheeccCCCCceeE-EecCCC------------eEEEEeccCCc----
Confidence            444332222110                  1123458888555444 232222            33344432221    


Q ss_pred             CcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhc
Q psy463          159 KVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW  238 (790)
Q Consensus       159 ~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~  238 (790)
                       .+..|+...|++..+ .|.|..+  +++....           ..-+-+.|..+|..     ...|.            
T Consensus       214 -ee~vL~GHgwdVksv-dWHP~kg--Liasgsk-----------DnlVKlWDprSg~c-----l~tlh------------  261 (464)
T KOG0284|consen  214 -EERVLRGHGWDVKSV-DWHPTKG--LIASGSK-----------DNLVKLWDPRSGSC-----LATLH------------  261 (464)
T ss_pred             -hhheeccCCCCccee-ccCCccc--eeEEccC-----------CceeEeecCCCcch-----hhhhh------------
Confidence             256677777887766 6777655  4443321           12334457666653     22222            


Q ss_pred             ccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccc
Q psy463          239 DEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN  318 (790)
Q Consensus       239 ~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~  318 (790)
                           .....+..+.|+|+|.++...++++.   |.++|+.+-+.  |..-.+...   -+....|+|=...|+.+..  
T Consensus       262 -----~HKntVl~~~f~~n~N~Llt~skD~~---~kv~DiR~mkE--l~~~r~Hkk---dv~~~~WhP~~~~lftsgg--  326 (464)
T KOG0284|consen  262 -----GHKNTVLAVKFNPNGNWLLTGSKDQS---CKVFDIRTMKE--LFTYRGHKK---DVTSLTWHPLNESLFTSGG--  326 (464)
T ss_pred             -----hccceEEEEEEcCCCCeeEEccCCce---EEEEehhHhHH--HHHhhcchh---hheeeccccccccceeecc--
Confidence                 45567889999999997777777653   77778763221  111110010   1447899999888874444  


Q ss_pred             cccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          319 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       319 ~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                        .+|        .|+.+.+...+     ....+...-......++|.|=|..|.-.+++
T Consensus       327 --~Dg--------svvh~~v~~~~-----p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd  371 (464)
T KOG0284|consen  327 --SDG--------SVVHWVVGLEE-----PLGEIPPAHDGEIWSLAYHPLGHILATGSND  371 (464)
T ss_pred             --CCC--------ceEEEeccccc-----cccCCCcccccceeeeeccccceeEeecCCC
Confidence              455        45555554333     0112222211223348899998755444443

>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins

Probab=97.77  E-value=0.00056  Score=62.42  Aligned_cols=81  Identities=14%  Similarity=0.157  Sum_probs=54.6

Q ss_pred             HHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC
Q psy463          527 YLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP  606 (790)
Q Consensus       527 ~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p  606 (790)
                      ..++++|+.|+.+|-.-      .|-.   ..-......|+.+.++...++   -..+++.++|.|+|+-+...+..+-|
T Consensus        23 ~~l~~~G~~VvGvdsl~------Yfw~---~rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp   90 (192)
T PF06057_consen   23 EALAKQGVPVVGVDSLR------YFWS---ERTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLP   90 (192)
T ss_pred             HHHHHCCCeEEEechHH------HHhh---hCCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCC
Confidence            34555899999998432      1111   111124577888888877763   23689999999999998888877766


Q ss_pred             C---CceEEEEEeCCC
Q psy463          607 S---NVFKCGISVAPV  619 (790)
Q Consensus       607 ~---~~~~~~v~~~~~  619 (790)
                      .   ..++.+++.+|-
T Consensus        91 ~~~r~~v~~v~Ll~p~  106 (192)
T PF06057_consen   91 AALRARVAQVVLLSPS  106 (192)
T ss_pred             HHHHhheeEEEEeccC
Confidence            4   356666666664

VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].

>KOG0265|consensus

Probab=97.76  E-value=0.043  Score=53.03  Aligned_cols=148  Identities=13%  Similarity=0.090  Sum_probs=85.9

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ....++.+.|.-++..+....-+   .+|.+.|+..+.+.-++..-     .+.......||+|..+. .-+    -   
T Consensus       173 ~kyqltAv~f~d~s~qv~sggId---n~ikvWd~r~~d~~~~lsGh-----~DtIt~lsls~~gs~ll-sns----M---  236 (338)
T KOG0265|consen  173 NKYQLTAVGFKDTSDQVISGGID---NDIKVWDLRKNDGLYTLSGH-----ADTITGLSLSRYGSFLL-SNS----M---  236 (338)
T ss_pred             cceeEEEEEecccccceeecccc---CceeeeccccCcceEEeecc-----cCceeeEEeccCCCccc-ccc----c---
Confidence            34556789998888744432211   23777787766665555422     22355788999999775 222    1   


Q ss_pred             CCcCcccEEEEEEcCC---CCcccCCCcccccCC---CeEEe-EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463          325 TPVDSWDHLTFIDLDD---QAGIKDKVPVPLTRG---RFTVT-EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT  397 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~---~~~~~~~~~~~lt~~---~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~  397 (790)
                           -..+.++|..-   +++     -..+-.+   .++.. -.-+|||++..+-+.+.+     +.+|+.+..+    
T Consensus       237 -----d~tvrvwd~rp~~p~~R-----~v~if~g~~hnfeknlL~cswsp~~~~i~ags~d-----r~vyvwd~~~----  297 (338)
T KOG0265|consen  237 -----DNTVRVWDVRPFAPSQR-----CVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSAD-----RFVYVWDTTS----  297 (338)
T ss_pred             -----cceEEEEEecccCCCCc-----eEEEeecchhhhhhhcceeeccCCCCcccccccc-----ceEEEeeccc----
Confidence                 12566666532   220     0011111   11111 126899999988887766     7888887755    


Q ss_pred             cceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          398 PECITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       398 ~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      .+.|..    +++..+.+....|.|....|....
T Consensus       298 r~~lyk----lpGh~gsvn~~~Fhp~e~iils~~  327 (338)
T KOG0265|consen  298 RRILYK----LPGHYGSVNEVDFHPTEPIILSCS  327 (338)
T ss_pred             ccEEEE----cCCcceeEEEeeecCCCcEEEEec
Confidence            122222    344677888899999888664433

>KOG2314|consensus

Probab=97.74  E-value=0.014  Score=60.98  Aligned_cols=206  Identities=15%  Similarity=0.166  Sum_probs=103.7

Q ss_pred             CCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEE-EeeeccCCccEEEEe
Q psy463          111 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI-LAWDERENNPLLILS  189 (790)
Q Consensus       111 ~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~-~~~~~~~~~~~~~~~  189 (790)
                      ..+..|||-+.-|+|++......        -..+.++.+.++..       --|..-++|.+- +.|-..++. +.+.-
T Consensus       349 Ir~FswsP~~~llAYwtpe~~~~--------parvtL~evPs~~~-------iRt~nlfnVsDckLhWQk~gdy-Lcvkv  412 (698)
T KOG2314|consen  349 IRDFSWSPTSNLLAYWTPETNNI--------PARVTLMEVPSKRE-------IRTKNLFNVSDCKLHWQKSGDY-LCVKV  412 (698)
T ss_pred             ccCcccCCCcceEEEEcccccCC--------cceEEEEecCccce-------eeeccceeeeccEEEeccCCcE-EEEEE
Confidence            34579999999999998754432        12466666654421       112233344433 455444443 33322


Q ss_pred             cc-cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEe-c
Q psy463          190 HN-QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVN-R  266 (790)
Q Consensus       190 ~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~-r  266 (790)
                      .. ....-.+ ..+.-+|+++.-..     +  |...-                 .-...+-.++|-|.|. .+..+. .
T Consensus       413 dR~tK~~~~g-~f~n~eIfrireKd-----I--pve~v-----------------elke~vi~FaWEP~gdkF~vi~g~~  467 (698)
T KOG2314|consen  413 DRHTKSKVKG-QFSNLEIFRIREKD-----I--PVEVV-----------------ELKESVIAFAWEPHGDKFAVISGNT  467 (698)
T ss_pred             Eeeccccccc-eEeeEEEEEeeccC-----C--Cceee-----------------ecchheeeeeeccCCCeEEEEEccc
Confidence            21 1111011 12334666664211     1  11111                 1123456899999998 433332 2


Q ss_pred             cCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccC
Q psy463          267 VQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD  346 (790)
Q Consensus       267 ~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~  346 (790)
                      .....+.|-+....++.+.+..-+..     ......|||.|+.+++.+-    ...      ...|+.+|.+-..    
T Consensus       468 ~k~tvsfY~~e~~~~~~~lVk~~dk~-----~~N~vfwsPkG~fvvva~l----~s~------~g~l~F~D~~~a~----  528 (698)
T KOG2314|consen  468 VKNTVSFYAVETNIKKPSLVKELDKK-----FANTVFWSPKGRFVVVAAL----VSR------RGDLEFYDTDYAD----  528 (698)
T ss_pred             cccceeEEEeecCCCchhhhhhhccc-----ccceEEEcCCCcEEEEEEe----ccc------ccceEEEecchhh----
Confidence            22334566665444444333222111     1457899999998874432    111      3378999976432    


Q ss_pred             CCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          347 KVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       347 ~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                        .+..............|+|.|+++.-.+..
T Consensus       529 --~k~~~~~eh~~at~veWDPtGRYvvT~ss~  558 (698)
T KOG2314|consen  529 --LKDTASPEHFAATEVEWDPTGRYVVTSSSS  558 (698)
T ss_pred             --hhhccCccccccccceECCCCCEEEEeeeh
Confidence              333222221122237899999977655443

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.73  E-value=0.0099  Score=58.99  Aligned_cols=211  Identities=12%  Similarity=0.040  Sum_probs=114.6

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEec--cCcceEEEEEECCCC
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNR--VQNRARITRCSINEG  281 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r--~~~~~~i~~~~~~~g  281 (790)
                      ..++++|..+|+.     +..+.               .+...+.+....|||||++++.+..  ....-.|-++|+..+
T Consensus        28 ~~~~v~D~~~g~~-----~~~~~---------------a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~   87 (305)
T PF07433_consen   28 TFALVFDCRTGQL-----LQRLW---------------APPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARG   87 (305)
T ss_pred             cEEEEEEcCCCce-----eeEEc---------------CCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCC
Confidence            5788889988863     22333               1255677889999999997766644  334567899998832


Q ss_pred             ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc---CCCC---CcCcccEEEEEEcCCCCcccCCCccc--cc
Q psy463          282 TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES---DGST---PVDSWDHLTFIDLDDQAGIKDKVPVP--LT  353 (790)
Q Consensus       282 ~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~---~g~~---~~~~~~~l~~~d~~~~~~~~~~~~~~--lt  353 (790)
                       -+++-+-.  ..=++ .+...+.|||+.|+ +++-....   .|..   ...=...|.++|..+|+.     ..+  |.
T Consensus        88 -~~ri~E~~--s~GIG-PHel~l~pDG~tLv-VANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~l-----l~q~~Lp  157 (305)
T PF07433_consen   88 -YRRIGEFP--SHGIG-PHELLLMPDGETLV-VANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGAL-----LEQVELP  157 (305)
T ss_pred             -cEEEeEec--CCCcC-hhhEEEcCCCCEEE-EEcCCCccCcccCceecChhhcCCceEEEecCCCce-----eeeeecC
Confidence             22232211  11122 34789999999998 44311100   1100   000022567777777761     223  32


Q ss_pred             C--CCeEEeEEEeeecCCCEEEEEEcC-CCCce--EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEE
Q psy463          354 R--GRFTVTEILAWDEKENNVYFLSTQ-GSPIV--QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYV  428 (790)
Q Consensus       354 ~--~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~--~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~  428 (790)
                      .  ....+.. +++++||. ++|.... +.+..  --|......   ...+.+.........-+..+.++++++++..++
T Consensus       158 ~~~~~lSiRH-La~~~~G~-V~~a~Q~qg~~~~~~PLva~~~~g---~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia  232 (305)
T PF07433_consen  158 PDLHQLSIRH-LAVDGDGT-VAFAMQYQGDPGDAPPLVALHRRG---GALRLLPAPEEQWRRLNGYIGSIAADRDGRLIA  232 (305)
T ss_pred             ccccccceee-EEecCCCc-EEEEEecCCCCCccCCeEEEEcCC---CcceeccCChHHHHhhCCceEEEEEeCCCCEEE
Confidence            1  2233444 89999986 5565554 33221  112222221   122222110000000134667899999999988


Q ss_pred             EEeecCCCCeEEEEecCCCeEEE
Q psy463          429 LSCIGPGIPEIMLFDKTGQRLLY  451 (790)
Q Consensus       429 ~~~~~~~~~~i~~~~~~~~~~~~  451 (790)
                      .++..-  ..+.++|.++++...
T Consensus       233 ~tsPrG--g~~~~~d~~tg~~~~  253 (305)
T PF07433_consen  233 VTSPRG--GRVAVWDAATGRLLG  253 (305)
T ss_pred             EECCCC--CEEEEEECCCCCEee
Confidence            875433  467777887776654

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.72  E-value=0.025  Score=57.49  Aligned_cols=104  Identities=13%  Similarity=0.115  Sum_probs=59.4

Q ss_pred             EEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEccc--cccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463          273 ITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN--QESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  349 (790)
Q Consensus       273 i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~--~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~  349 (790)
                      +++++.+++.. +.+........ .....+....|||. |+|.....  .......   ..-.||+++..++.      .
T Consensus        87 ~~~~~~~~~~~~t~~~~~~~~~~-~~r~ND~~v~pdG~-~wfgt~~~~~~~~~~~~---~~G~lyr~~p~g~~------~  155 (307)
T COG3386          87 VRLLDPDTGGKITLLAEPEDGLP-LNRPNDGVVDPDGR-IWFGDMGYFDLGKSEER---PTGSLYRVDPDGGV------V  155 (307)
T ss_pred             cEEEeccCCceeEEeccccCCCC-cCCCCceeEcCCCC-EEEeCCCccccCccccC---CcceEEEEcCCCCE------E
Confidence            56666665555 44443322111 12244788899987 55555420  0011100   02369999975553      4


Q ss_pred             ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463          350 VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA  392 (790)
Q Consensus       350 ~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~  392 (790)
                      +.+ .+...+..-++||||++.+|++-+..    ..|++++++
T Consensus       156 ~l~-~~~~~~~NGla~SpDg~tly~aDT~~----~~i~r~~~d  193 (307)
T COG3386         156 RLL-DDDLTIPNGLAFSPDGKTLYVADTPA----NRIHRYDLD  193 (307)
T ss_pred             Eee-cCcEEecCceEECCCCCEEEEEeCCC----CeEEEEecC
Confidence            444 44344555589999999999987663    578888775

>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]

Probab=97.70  E-value=0.0049  Score=66.94  Aligned_cols=133  Identities=15%  Similarity=0.137  Sum_probs=83.7

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcc-ccccccccchHHHHHhcCCeEEEEEcCCCCCCCh----hhhH--h
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSF-QVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG----NTLK--Y  553 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g----~~~~--~  553 (790)
                      ..|...+++|.++.   ++    ++.+ |+++-. .+............+ ++||+++.-|- |+.+..    ..|.  .
T Consensus        15 ~~i~fev~LP~~WN---gR----~~~~-GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~   84 (474)
T PF07519_consen   15 PNIRFEVWLPDNWN---GR----FLQV-GGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNNP   84 (474)
T ss_pred             ceEEEEEECChhhc---cC----eEEE-CCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCCH
Confidence            37888899999765   22    2333 433321 111111000022233 48999999995 443321    1121  1


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY  624 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~  624 (790)
                      ....+++...+.+...+.+.+++.+-...+++-...|.|-||--++..|.++|+ .|.++++.+|..+|..
T Consensus        85 ~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~-dfDGIlAgaPA~~~~~  154 (474)
T PF07519_consen   85 EALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPE-DFDGILAGAPAINWTH  154 (474)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChh-hcCeEEeCCchHHHHH
Confidence            112344445566666677777765444667889999999999999999999996 9999999999988754

It also includes several bacterial homologues of unknown function.

>KOG1274|consensus

Probab=97.69  E-value=0.021  Score=63.32  Aligned_cols=188  Identities=19%  Similarity=0.232  Sum_probs=105.2

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..++-+|+.+++-++.-             -|-++++++..     ....+-..+.++.. +.++|++.  ++-++.   
T Consensus       102 ~~v~g~g~~iaagsdD~-------------~vK~~~~~D~s-----~~~~lrgh~apVl~-l~~~p~~~--fLAvss---  157 (933)
T KOG1274|consen  102 LAVSGSGKMIAAGSDDT-------------AVKLLNLDDSS-----QEKVLRGHDAPVLQ-LSYDPKGN--FLAVSS---  157 (933)
T ss_pred             EEEecCCcEEEeecCce-------------eEEEEeccccc-----hheeecccCCceee-eeEcCCCC--EEEEEe---
Confidence            48899999999755311             45566665543     12222233334433 36677654  332222   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRAR  272 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~  272 (790)
                              ..+.|+.++++++...     ..++.  ..-       .+..........++|+|+|. +++...++.    
T Consensus       158 --------~dG~v~iw~~~~~~~~-----~tl~~--v~k-------~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~----  211 (933)
T KOG1274|consen  158 --------CDGKVQIWDLQDGILS-----KTLTG--VDK-------DNEFILSRICTRLAWHPKGGTLAVPPVDNT----  211 (933)
T ss_pred             --------cCceEEEEEcccchhh-----hhccc--CCc-------cccccccceeeeeeecCCCCeEEeeccCCe----
Confidence                    2268888888876532     22220  000       00001245678999999966 666655544    


Q ss_pred             EEEEECCCCceeEEEEE-eCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          273 ITRCSINEGTCDVVFSR-DLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~-~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      +.+++.++.+..-.+.. ....    .+....|||.|++|+ ...    .+|        +|.++|+++-+      .  
T Consensus       212 Vkvy~r~~we~~f~Lr~~~~ss----~~~~~~wsPnG~YiA-As~----~~g--------~I~vWnv~t~~------~--  266 (933)
T KOG1274|consen  212 VKVYSRKGWELQFKLRDKLSSS----KFSDLQWSPNGKYIA-AST----LDG--------QILVWNVDTHE------R--  266 (933)
T ss_pred             EEEEccCCceeheeeccccccc----ceEEEEEcCCCcEEe-eec----cCC--------cEEEEecccch------h--
Confidence            88888888765432221 1111    144789999999998 333    455        78999987633      1  


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                        .......-..+|-|+...|-+....
T Consensus       267 --~~~~~~Vc~~aw~p~~n~it~~~~~  291 (933)
T KOG1274|consen  267 --HEFKRAVCCEAWKPNANAITLITAL  291 (933)
T ss_pred             --ccccceeEEEecCCCCCeeEEEeec
Confidence              1111112226788887777666555

>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]

Probab=97.68  E-value=0.00036  Score=70.96  Aligned_cols=88  Identities=16%  Similarity=0.106  Sum_probs=58.2

Q ss_pred             HHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC
Q psy463          527 YLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP  606 (790)
Q Consensus       527 ~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p  606 (790)
                      .++.++|..|+.++.++-...-.      ...+..+..+.+..+++.+++..+   .++|-++|+|.||.++..++...+
T Consensus       133 ~~l~~~g~~vfvIsw~nPd~~~~------~~~~edYi~e~l~~aid~v~~itg---~~~InliGyCvGGtl~~~ala~~~  203 (445)
T COG3243         133 RWLLEQGLDVFVISWRNPDASLA------AKNLEDYILEGLSEAIDTVKDITG---QKDINLIGYCVGGTLLAAALALMA  203 (445)
T ss_pred             HHHHHcCCceEEEeccCchHhhh------hccHHHHHHHHHHHHHHHHHHHhC---ccccceeeEecchHHHHHHHHhhh
Confidence            44455999999999876432111      111222333566677777776322   378999999999999999988888


Q ss_pred             CCceEEEEEeCCCCCcc
Q psy463          607 SNVFKCGISVAPVTDWI  623 (790)
Q Consensus       607 ~~~~~~~v~~~~~~~~~  623 (790)
                      .++++.+.......|+.
T Consensus       204 ~k~I~S~T~lts~~DF~  220 (445)
T COG3243         204 AKRIKSLTLLTSPVDFS  220 (445)
T ss_pred             hcccccceeeecchhhc
Confidence            75577666665554543

>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function

Probab=97.66  E-value=0.00027  Score=70.78  Aligned_cols=113  Identities=18%  Similarity=0.159  Sum_probs=70.6

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhc--CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHH----HHHHH
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADN--KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQIN----VTRYL  574 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~----~~~~l  574 (790)
                      .++++++-|.||...    |...|...+...  ..+.|+.+.+.|+......-  ..........++|+++    .++.+
T Consensus         2 ~~li~~IPGNPGlv~----fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~--~~~~~~~~~sL~~QI~hk~~~i~~~   75 (266)
T PF10230_consen    2 RPLIVFIPGNPGLVE----FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNS--KFSPNGRLFSLQDQIEHKIDFIKEL   75 (266)
T ss_pred             cEEEEEECCCCChHH----HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccc--cccCCCCccCHHHHHHHHHHHHHHH
Confidence            468999999999743    233344444432  57899999999876533220  0001122244555543    33333


Q ss_pred             HHhCCCcCCCceEEEEechHHHHHHHHHhcCC--CCceEEEEEeCCCC
Q psy463          575 QENLPYIDKTRTAIWGWSYGGYATGLALALDP--SNVFKCGISVAPVT  620 (790)
Q Consensus       575 ~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p--~~~~~~~v~~~~~~  620 (790)
                      ..... ....++.++|||.|+|+++.++.+.+  ...++.++...|..
T Consensus        76 ~~~~~-~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi  122 (266)
T PF10230_consen   76 IPQKN-KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI  122 (266)
T ss_pred             hhhhc-CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence            33111 14578999999999999999999988  34677777777754

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.65  E-value=0.0031  Score=62.71  Aligned_cols=109  Identities=19%  Similarity=0.217  Sum_probs=62.8

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...++++||||+.+||++..++...+|..+..+..         ...++........|.+++.  .|.............
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~---------~~~~~g~~l~~PS~d~~g~--~W~v~~~~~~~~~~~   93 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPV---------RPVLTGGSLTRPSWDPDGW--VWTVDDGSGGVRVVR   93 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcc---------eeeccCCccccccccCCCC--EEEEEcCCCceEEEE
Confidence            46789999999999999977788889999876653         1111223444566766533  454433222212121


Q ss_pred             eCCCCeeeEEEeecCCCCccc-cCCccccccCCceEEEEeecCC
Q psy463           89 SINEGTCDVVFSRDLDRGWFE-PFDHLRFSSDGKKMLLILSHNQ  131 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~i~~~~~~~~  131 (790)
                      +..++....+...   ..+.. .....++||||.+++++....+
T Consensus        94 ~~~~g~~~~~~v~---~~~~~~~I~~l~vSpDG~RvA~v~~~~~  134 (253)
T PF10647_consen   94 DSASGTGEPVEVD---WPGLRGRITALRVSPDGTRVAVVVEDGG  134 (253)
T ss_pred             ecCCCcceeEEec---ccccCCceEEEEECCCCcEEEEEEecCC
Confidence            2222322221111   11111 2345789999999999986544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG0296|consensus

Probab=97.64  E-value=0.0042  Score=61.24  Aligned_cols=81  Identities=12%  Similarity=0.186  Sum_probs=55.7

Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      |.++|++..+.|.+...+..      .-...|-+ .+.|+ ++.    .+|        .|+.+|+.+|.     .....
T Consensus       310 i~iyD~a~~~~R~~c~he~~------V~~l~w~~-t~~l~-t~c----~~g--------~v~~wDaRtG~-----l~~~y  364 (399)
T KOG0296|consen  310 IAIYDLAASTLRHICEHEDG------VTKLKWLN-TDYLL-TAC----ANG--------KVRQWDARTGQ-----LKFTY  364 (399)
T ss_pred             EEEEecccchhheeccCCCc------eEEEEEcC-cchhe-eec----cCc--------eEEeeeccccc-----eEEEE
Confidence            88888888887777665421      34677877 45555 554    567        79999999887     23446


Q ss_pred             cCCCeEEeEEEeeecCCCEEEEEEcCC
Q psy463          353 TRGRFTVTEILAWDEKENNVYFLSTQG  379 (790)
Q Consensus       353 t~~~~~~~~~~~~s~dg~~l~~~~~~~  379 (790)
                      +.+...+.. ++.+||++.|+-.+.++
T Consensus       365 ~GH~~~Il~-f~ls~~~~~vvT~s~D~  390 (399)
T KOG0296|consen  365 TGHQMGILD-FALSPQKRLVVTVSDDN  390 (399)
T ss_pred             ecCchheeE-EEEcCCCcEEEEecCCC
Confidence            666666665 77899998776666554

>COG1770 PtrB Protease II [Amino acid transport and metabolism]

Probab=97.64  E-value=0.15  Score=55.53  Aligned_cols=204  Identities=16%  Similarity=0.195  Sum_probs=118.7

Q ss_pred             ccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCc--ceEEEEEECC
Q psy463          202 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQN--RARITRCSIN  279 (790)
Q Consensus       202 ~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~--~~~i~~~~~~  279 (790)
                      .+..|-+.|+.+|+-.    +..++                    .....+.|.+||+.++++....+  ...++...+.
T Consensus       153 e~y~lr~kdL~tg~~~----~d~i~--------------------~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~g  208 (682)
T COG1770         153 EQYTLRFKDLATGEEL----PDEIT--------------------NTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLG  208 (682)
T ss_pred             cEEEEEEEeccccccc----chhhc--------------------ccccceEEecCCCeEEEEEEcCCCCcceEEEEecC
Confidence            3456777788887632    22222                    22457899999997776654433  3468888888


Q ss_pred             C--CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCe
Q psy463          280 E--GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF  357 (790)
Q Consensus       280 ~--g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~  357 (790)
                      +  ...+.|+++....-++    ...=|...++|++..+    ..-      ..++++++++..+.    .++.+.....
T Consensus       209 t~~~~d~lvyeE~d~~f~~----~v~~s~s~~yi~i~~~----~~~------tsE~~ll~a~~p~~----~p~vv~pr~~  270 (682)
T COG1770         209 TPGSSDELVYEEKDDRFFL----SVGRSRSEAYIVISLG----SHI------TSEVRLLDADDPEA----EPKVVLPREN  270 (682)
T ss_pred             CCCCcceEEEEcCCCcEEE----EeeeccCCceEEEEcC----CCc------ceeEEEEecCCCCC----ceEEEEEcCC
Confidence            7  5556666654322122    2334666777775443    112      45788988765330    1344433222


Q ss_pred             EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC-CCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCC
Q psy463          358 TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA-DPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGI  436 (790)
Q Consensus       358 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~  436 (790)
                      .+.  .....-+..+|+.++... ...+|++..+. ++......+++        .....--.++-=..+++..+...+.
T Consensus       271 g~e--Y~~eh~~d~f~i~sN~~g-knf~l~~ap~~~~~~~w~~~I~h--------~~~~~l~~~~~f~~~lVl~eR~~gl  339 (682)
T COG1770         271 GVE--YSVEHGGDRFYILSNADG-KNFKLVRAPVSADKSNWRELIPH--------REDVRLEGVDLFADHLVLLERQEGL  339 (682)
T ss_pred             CcE--EeeeecCcEEEEEecCCC-cceEEEEccCCCChhcCeeeecc--------CCCceeeeeeeeccEEEEEecccCC
Confidence            222  233444778888888844 45889888771 11112233333        1122223445556789898888889


Q ss_pred             CeEEEEecCCCeEEEeccchhH
Q psy463          437 PEIMLFDKTGQRLLYWDTNEDL  458 (790)
Q Consensus       437 ~~i~~~~~~~~~~~~l~~~~~~  458 (790)
                      |.|++.+..++....|..++..
T Consensus       340 p~v~v~~~~~~~~~~i~f~~~a  361 (682)
T COG1770         340 PRVVVRDRKTGEERGIAFDDEA  361 (682)
T ss_pred             ceEEEEecCCCceeeEEecchh
Confidence            9999999887666556555443

>KOG0772|consensus

Probab=97.64  E-value=0.0039  Score=64.21  Aligned_cols=122  Identities=16%  Similarity=0.186  Sum_probs=65.5

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...++.++||+||++++.-..+.   .+-++|+..-+.-........+.+  ...+..||||.+-|+ +...  ...|. 
T Consensus       364 g~~Itsi~FS~dg~~LlSRg~D~---tLKvWDLrq~kkpL~~~tgL~t~~--~~tdc~FSPd~kli~-TGtS--~~~~~-  434 (641)
T KOG0772|consen  364 GQDITSISFSYDGNYLLSRGFDD---TLKVWDLRQFKKPLNVRTGLPTPF--PGTDCCFSPDDKLIL-TGTS--APNGM-  434 (641)
T ss_pred             CCceeEEEeccccchhhhccCCC---ceeeeeccccccchhhhcCCCccC--CCCccccCCCceEEE-eccc--ccCCC-
Confidence            34678999999999655432222   277777765322211111111111  135789999988554 5542  12221 


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR  388 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  388 (790)
                         +...|+++|..+=+     .+..|--....+.. ..|.|.=+.|+..+.+|.   .++|.
T Consensus       435 ---~~g~L~f~d~~t~d-----~v~ki~i~~aSvv~-~~WhpkLNQi~~gsgdG~---~~vyY  485 (641)
T KOG0772|consen  435 ---TAGTLFFFDRMTLD-----TVYKIDISTASVVR-CLWHPKLNQIFAGSGDGT---AHVYY  485 (641)
T ss_pred             ---CCceEEEEecccee-----eEEEecCCCceEEE-EeecchhhheeeecCCCc---eEEEE
Confidence               13468888865433     12222222233443 679988777777666654   56654

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=97.63  E-value=0.022  Score=58.99  Aligned_cols=195  Identities=12%  Similarity=0.186  Sum_probs=94.6

Q ss_pred             cccccCC--ceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEE-EeeeccCCccEEEEec
Q psy463          114 LRFSSDG--KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI-LAWDERENNPLLILSH  190 (790)
Q Consensus       114 ~~~spdg--~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~-~~~~~~~~~~~~~~~~  190 (790)
                      -.|||.|  ..|+|+.....+...        .+.++.+..+.       .-.|..-+.+... +.|...++-+++-+-.
T Consensus       179 FsisP~~n~~~la~~tPEk~~kpa--------~~~i~sIp~~s-------~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t  243 (561)
T COG5354         179 FSISPEGNHDELAYWTPEKLNKPA--------MVRILSIPKNS-------VLVTKNLFKVSGVQLKWQVLGKYLLVLVMT  243 (561)
T ss_pred             EEecCCCCCceEEEEccccCCCCc--------EEEEEEccCCC-------eeeeeeeEeecccEEEEecCCceEEEEEEE
Confidence            4778864  558888776554333        44444443332       1112222233332 4555555543322222


Q ss_pred             ccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCc
Q psy463          191 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQN  269 (790)
Q Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~  269 (790)
                      ....  ..-....++||++.+.....     +..+                  .-.+.+.+++|+|+++ .+... .-. 
T Consensus       244 ~~ks--nKsyfgesnLyl~~~~e~~i-----~V~~------------------~~~~pVhdf~W~p~S~~F~vi~-g~~-  296 (561)
T COG5354         244 HTKS--NKSYFGESNLYLLRITERSI-----PVEK------------------DLKDPVHDFTWEPLSSRFAVIS-GYM-  296 (561)
T ss_pred             eeec--ccceeccceEEEEeeccccc-----ceec------------------cccccceeeeecccCCceeEEe-ccc-
Confidence            1111  11112237889888874321     1110                  1134578899999999 33333 111 


Q ss_pred             ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463          270 RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  349 (790)
Q Consensus       270 ~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~  349 (790)
                      ...+...++.+. .+-..-+..       -..+.|||.+++|++ +..+ ..        ...+-++|..+.-       
T Consensus       297 pa~~s~~~lr~N-l~~~~Pe~~-------rNT~~fsp~~r~il~-agF~-nl--------~gni~i~~~~~rf-------  351 (561)
T COG5354         297 PASVSVFDLRGN-LRFYFPEQK-------RNTIFFSPHERYILF-AGFD-NL--------QGNIEIFDPAGRF-------  351 (561)
T ss_pred             ccceeecccccc-eEEecCCcc-------cccccccCcccEEEE-ecCC-cc--------ccceEEeccCCce-------
Confidence            112555555544 222111111       236889999999884 3321 12        3367778876542       


Q ss_pred             ccccCCCeEEeEEEeeecCCCEEEEE
Q psy463          350 VPLTRGRFTVTEILAWDEKENNVYFL  375 (790)
Q Consensus       350 ~~lt~~~~~~~~~~~~s~dg~~l~~~  375 (790)
                      ..++.-...-.....|+||+..++..
T Consensus       352 ~~~~~~~~~n~s~~~wspd~qF~~~~  377 (561)
T COG5354         352 KVAGAFNGLNTSYCDWSPDGQFYDTD  377 (561)
T ss_pred             EEEEEeecCCceEeeccCCceEEEec
Confidence            22221111112336799999854443

>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]

Probab=97.60  E-value=0.0019  Score=57.61  Aligned_cols=59  Identities=17%  Similarity=0.134  Sum_probs=47.8

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHHHHh
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFLDSC  788 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl~~~  788 (790)
                      .-|.++++..+|+.|+++.++.+.+++..     .++....+||....    ...+.+..+.+|+.+.
T Consensus       117 pfps~vvaSrnDp~~~~~~a~~~a~~wgs-----~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~  179 (181)
T COG3545         117 PFPSVVVASRNDPYVSYEHAEDLANAWGS-----ALVDVGEGGHINAESGFGPWPEGYALLAQLLSRA  179 (181)
T ss_pred             CCceeEEEecCCCCCCHHHHHHHHHhccH-----hheecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence            57999999999999999999999998865     56777888896543    6677777777777543

>PTZ00421 coronin; Provisional

Probab=97.60  E-value=0.0066  Score=66.37  Aligned_cols=166  Identities=13%  Similarity=0.117  Sum_probs=95.4

Q ss_pred             CCCCEEEEEEEcc-CCcEEEEEeccCcceEEEEEECCCCce-----eEEEEEeCCCcccccCCceeEccCCCEEEEEEcc
Q psy463          244 NVEPVLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTC-----DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSH  317 (790)
Q Consensus       244 ~~~~~~~~~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~-----~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~  317 (790)
                      .....+..+.|+| |+++++....+.   .|.++++.++..     ..+..-.+..   .......|+|++..++++.+ 
T Consensus        73 GH~~~V~~v~fsP~d~~~LaSgS~Dg---tIkIWdi~~~~~~~~~~~~l~~L~gH~---~~V~~l~f~P~~~~iLaSgs-  145 (493)
T PTZ00421         73 GQEGPIIDVAFNPFDPQKLFTASEDG---TIMGWGIPEEGLTQNISDPIVHLQGHT---KKVGIVSFHPSAMNVLASAG-  145 (493)
T ss_pred             CCCCCEEEEEEcCCCCCEEEEEeCCC---EEEEEecCCCccccccCcceEEecCCC---CcEEEEEeCcCCCCEEEEEe-
Confidence            4456688999999 888555554432   277777765421     1122111111   12346899999765554555 


Q ss_pred             ccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463          318 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT  397 (790)
Q Consensus       318 ~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~  397 (790)
                         .++        .|.++|+.+++     ....+..+...+.. ++|+|||+.|+..+.+     ..|...++..  ++
T Consensus       146 ---~Dg--------tVrIWDl~tg~-----~~~~l~~h~~~V~s-la~spdG~lLatgs~D-----g~IrIwD~rs--g~  201 (493)
T PTZ00421        146 ---ADM--------VVNVWDVERGK-----AVEVIKCHSDQITS-LEWNLDGSLLCTTSKD-----KKLNIIDPRD--GT  201 (493)
T ss_pred             ---CCC--------EEEEEECCCCe-----EEEEEcCCCCceEE-EEEECCCCEEEEecCC-----CEEEEEECCC--Cc
Confidence               455        68899998776     13344444444554 8899999977665554     4555666654  32


Q ss_pred             c-ceeeecccccCCCcccEEEEEEecCCcEEEEEeec-CCCCeEEEEecCC
Q psy463          398 P-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG-PGIPEIMLFDKTG  446 (790)
Q Consensus       398 ~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~-~~~~~i~~~~~~~  446 (790)
                      . ..+..     + .........|++++..++..... ..-..|.++|+..
T Consensus       202 ~v~tl~~-----H-~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~  246 (493)
T PTZ00421        202 IVSSVEA-----H-ASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRK  246 (493)
T ss_pred             EEEEEec-----C-CCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCC
Confidence            2 11211     0 11123456788887776544322 2256788888865

>KOG2139|consensus

Probab=97.59  E-value=0.0042  Score=61.17  Aligned_cols=113  Identities=18%  Similarity=0.310  Sum_probs=72.7

Q ss_pred             cCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc-CCCeEEeEEEeeecCCCEEEEEE
Q psy463          298 PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT-RGRFTVTEILAWDEKENNVYFLS  376 (790)
Q Consensus       298 ~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-~~~~~~~~~~~~s~dg~~l~~~~  376 (790)
                      +..+..|.+||..++ .++     .|      -.+|.++|++++.      ..+|. .+...+. .+.|||||.+++-.+
T Consensus       197 pVtsmqwn~dgt~l~-tAS-----~g------sssi~iWdpdtg~------~~pL~~~glgg~s-lLkwSPdgd~lfaAt  257 (445)
T KOG2139|consen  197 PVTSMQWNEDGTILV-TAS-----FG------SSSIMIWDPDTGQ------KIPLIPKGLGGFS-LLKWSPDGDVLFAAT  257 (445)
T ss_pred             eeeEEEEcCCCCEEe-ecc-----cC------cceEEEEcCCCCC------cccccccCCCcee-eEEEcCCCCEEEEec
Confidence            356899999999887 555     34      4589999999887      55554 3333333 388999999765555


Q ss_pred             cCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          377 TQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       377 ~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                      -++.   ..||--.- .  ...++-..       +.+.+....|||+|++++|++.+..  .+|-...
T Consensus       258 ~dav---frlw~e~q-~--wt~erw~l-------gsgrvqtacWspcGsfLLf~~sgsp--~lysl~f  310 (445)
T KOG2139|consen  258 CDAV---FRLWQENQ-S--WTKERWIL-------GSGRVQTACWSPCGSFLLFACSGSP--RLYSLTF  310 (445)
T ss_pred             ccce---eeeehhcc-c--ceecceec-------cCCceeeeeecCCCCEEEEEEcCCc--eEEEEee
Confidence            4433   55652211 1  11222222       3447788999999999999987653  4554443

>KOG0645|consensus

Probab=97.58  E-value=0.0091  Score=56.62  Aligned_cols=154  Identities=15%  Similarity=0.217  Sum_probs=90.0

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...+.+++|||.|++++..+-+..   ..+..-..++-..+...++...   -.-..+||++|..|+ +.+    ++.  
T Consensus        61 krsVRsvAwsp~g~~La~aSFD~t---~~Iw~k~~~efecv~~lEGHEn---EVK~Vaws~sG~~LA-TCS----RDK--  127 (312)
T KOG0645|consen   61 KRSVRSVAWSPHGRYLASASFDAT---VVIWKKEDGEFECVATLEGHEN---EVKCVAWSASGNYLA-TCS----RDK--  127 (312)
T ss_pred             hheeeeeeecCCCcEEEEeeccce---EEEeecCCCceeEEeeeecccc---ceeEEEEcCCCCEEE-Eee----CCC--
Confidence            345789999999997776665432   2233333444333433332111   145799999999999 777    333  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL  405 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~  405 (790)
                            -+|++..+.+.+..  ....|+.+.-++.. ..|.|... |.|.....+  ...+|+-..++   .-+|+-.  
T Consensus       128 ------SVWiWe~deddEfe--c~aVL~~HtqDVK~-V~WHPt~d-lL~S~SYDn--TIk~~~~~~dd---dW~c~~t--  190 (312)
T KOG0645|consen  128 ------SVWIWEIDEDDEFE--CIAVLQEHTQDVKH-VIWHPTED-LLFSCSYDN--TIKVYRDEDDD---DWECVQT--  190 (312)
T ss_pred             ------eEEEEEecCCCcEE--EEeeeccccccccE-EEEcCCcc-eeEEeccCC--eEEEEeecCCC---CeeEEEE--
Confidence                  47777776544111  12346666556666 78999755 566655532  26777765422   2222221  


Q ss_pred             cccCCCcccEEEEEEecCCcEEEEEe
Q psy463          406 LTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       406 ~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                        +.+....+....|.+.|..++-..
T Consensus       191 --l~g~~~TVW~~~F~~~G~rl~s~s  214 (312)
T KOG0645|consen  191 --LDGHENTVWSLAFDNIGSRLVSCS  214 (312)
T ss_pred             --ecCccceEEEEEecCCCceEEEec
Confidence              112344677889999998775443

>KOG1282|consensus

Probab=97.57  E-value=0.0026  Score=67.33  Aligned_cols=139  Identities=17%  Similarity=0.189  Sum_probs=81.4

Q ss_pred             CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc--chH-----------HHHHhcCCeEEEEEcCC-C
Q psy463          478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV--DWN-----------LYLADNKDIVVAYIDGR-N  543 (790)
Q Consensus       478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~--~~~-----------~~~~~~~G~~v~~~d~r-G  543 (790)
                      ..+..+.+|.+.-..    .....|+|+++-||||...+...+..  .+.           .+-.. +-..++..|.+ |
T Consensus        54 ~~~~~LFYwf~eS~~----~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWn-k~aNiLfLd~PvG  128 (454)
T KOG1282|consen   54 SEGRQLFYWFFESEN----NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWN-KEANILFLDQPVG  128 (454)
T ss_pred             CCCceEEEEEEEccC----CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCcccc-ccccEEEEecCCc
Confidence            357899999987653    34567999999999998654321110  000           00011 12247788876 4


Q ss_pred             CCCChhhhHhhhhccCCccchhHHHHHHH-HHHHhCCCcCCCceEEEEechHHHHH----HHHHhcC-----CCCceEEE
Q psy463          544 SALKGNTLKYAGYRRLGTVEIYDQINVTR-YLQENLPYIDKTRTAIWGWSYGGYAT----GLALALD-----PSNVFKCG  613 (790)
Q Consensus       544 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~~d~~ri~i~G~S~GG~~a----~~~a~~~-----p~~~~~~~  613 (790)
                      .|. .-.-.......-....+.|...++. |+. ++|..-.+.+.|.|-||+|...    ..+....     |.-.+++.
T Consensus       129 vGF-SYs~~~~~~~~~D~~~A~d~~~FL~~wf~-kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~  206 (454)
T KOG1282|consen  129 VGF-SYSNTSSDYKTGDDGTAKDNYEFLQKWFE-KFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGY  206 (454)
T ss_pred             CCc-cccCCCCcCcCCcHHHHHHHHHHHHHHHH-hChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEE
Confidence            332 2111111111111234566655554 555 4888878899999999999554    4443332     22367899


Q ss_pred             EEeCCCCCcc
Q psy463          614 ISVAPVTDWI  623 (790)
Q Consensus       614 v~~~~~~~~~  623 (790)
                      +.+.|+++..
T Consensus       207 ~IGNg~td~~  216 (454)
T KOG1282|consen  207 AIGNGLTDPE  216 (454)
T ss_pred             EecCcccCcc
Confidence            9999998754

>KOG2096|consensus

Probab=97.56  E-value=0.024  Score=55.08  Aligned_cols=156  Identities=10%  Similarity=0.041  Sum_probs=83.0

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      -+....-.++++...+.+.   .|.++++.+.-...+......      ....+.||||+.|+. +..            
T Consensus       191 i~iGiA~~~k~imsas~dt---~i~lw~lkGq~L~~idtnq~~------n~~aavSP~GRFia~-~gF------------  248 (420)
T KOG2096|consen  191 INIGIAGNAKYIMSASLDT---KICLWDLKGQLLQSIDTNQSS------NYDAAVSPDGRFIAV-SGF------------  248 (420)
T ss_pred             EEEeecCCceEEEEecCCC---cEEEEecCCceeeeecccccc------ccceeeCCCCcEEEE-ecC------------
Confidence            3455555666665554433   388888885544444433221      347899999998873 321            


Q ss_pred             ccEEEEEEc---CCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecc
Q psy463          330 WDHLTFIDL---DDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDL  405 (790)
Q Consensus       330 ~~~l~~~d~---~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~  405 (790)
                      ..++.++.+   ..|+.-+....-+|..+.-.+.. ++||+++.+++-.+.+|.   .+||-.++.-..++ ++.|-..-
T Consensus       249 TpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~-~aFsn~S~r~vtvSkDG~---wriwdtdVrY~~~qDpk~Lk~g~  324 (420)
T KOG2096|consen  249 TPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLA-AAFSNSSTRAVTVSKDGK---WRIWDTDVRYEAGQDPKILKEGS  324 (420)
T ss_pred             CCCceEEEEEeccCcchhhhhhhheeccchhheee-eeeCCCcceeEEEecCCc---EEEeeccceEecCCCchHhhcCC
Confidence            113334332   12220000012234444444444 889999999988888776   88888776431121 22221110


Q ss_pred             cccCCCcccEEEEEEecCCcEEEEEe
Q psy463          406 LTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       406 ~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      ..+......--...+||.|+.++.+.
T Consensus       325 ~pl~aag~~p~RL~lsP~g~~lA~s~  350 (420)
T KOG2096|consen  325 APLHAAGSEPVRLELSPSGDSLAVSF  350 (420)
T ss_pred             cchhhcCCCceEEEeCCCCcEEEeec
Confidence            00000112223688999999988764

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=97.54  E-value=0.06  Score=64.89  Aligned_cols=170  Identities=14%  Similarity=0.089  Sum_probs=88.5

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEe------CCC---cccccCCceeEccCCCEEEEEEccccc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRD------LDR---GWFEPFDHLRFSSDGKKMLLILSHNQE  320 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~------~~~---~~~~~~~~~~~spDg~~i~~~~~~~~~  320 (790)
                      ..++++|++..++.++...  .+|++++..++....+....      +..   .-......++++|||+.|++.-+    
T Consensus       686 ~gVa~dp~~g~LyVad~~~--~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs----  759 (1057)
T PLN02919        686 WDVCFEPVNEKVYIAMAGQ--HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS----  759 (1057)
T ss_pred             eEEEEecCCCeEEEEECCC--CeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC----
Confidence            3678999665444443322  23888888877665432110      000   00111235889999998874333    


Q ss_pred             cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCC---------------------eEEeEEEeeecCCCEEEEEEcCC
Q psy463          321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR---------------------FTVTEILAWDEKENNVYFLSTQG  379 (790)
Q Consensus       321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~---------------------~~~~~~~~~s~dg~~l~~~~~~~  379 (790)
                        +      ...|.++|++++.      ...+..+.                     ......+++++||+ ||+.... 
T Consensus       760 --~------n~~Irv~D~~tg~------~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVADs~-  823 (1057)
T PLN02919        760 --E------SSSIRALDLKTGG------SRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVADSY-  823 (1057)
T ss_pred             --C------CCeEEEEECCCCc------EEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEEECC-
Confidence              2      2478899987654      22111000                     00111267889987 5555433 


Q ss_pred             CCceEEEEEEEcCCCCCCcceeeec-ccc------cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          380 SPIVQHMYRINIADPTATPECITCD-LLT------SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       380 ~~~~~~l~~~~~~~~~~~~~~lt~~-~~~------~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      +   ..|.+++.++  +....+... ...      ....-..-..+.++++|+.++.  + .....|.++++++++.
T Consensus       824 N---~rIrviD~~t--g~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVa--D-t~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        824 N---HKIKKLDPAT--KRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVA--D-TNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             C---CEEEEEECCC--CeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEE--E-CCCCEEEEEECCCCcc
Confidence            2   4678888765  333322210 000      0000112346789999974332  2 2245688888877543

>KOG0305|consensus

Probab=97.53  E-value=0.036  Score=58.93  Aligned_cols=155  Identities=10%  Similarity=0.024  Sum_probs=94.4

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      .....+....|++||++++.-   .+...+++.|....+. ..+.....      .+-..+|+|=-+.|+.+..      
T Consensus       299 ~H~qeVCgLkws~d~~~lASG---gnDN~~~Iwd~~~~~p~~~~~~H~a------AVKA~awcP~q~~lLAsGG------  363 (484)
T KOG0305|consen  299 GHRQEVCGLKWSPDGNQLASG---GNDNVVFIWDGLSPEPKFTFTEHTA------AVKALAWCPWQSGLLATGG------  363 (484)
T ss_pred             cccceeeeeEECCCCCeeccC---CCccceEeccCCCccccEEEeccce------eeeEeeeCCCccCceEEcC------
Confidence            445567889999999976543   2334488887744332 33333221      1457899998877763433      


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                      |..    -..|..+|..+|+     ....+-.+ -.|.. +.|++..+.|+.+-.... ....||.+..-.   ....++
T Consensus       364 Gs~----D~~i~fwn~~~g~-----~i~~vdtg-sQVcs-L~Wsk~~kEi~sthG~s~-n~i~lw~~ps~~---~~~~l~  428 (484)
T KOG0305|consen  364 GSA----DRCIKFWNTNTGA-----RIDSVDTG-SQVCS-LIWSKKYKELLSTHGYSE-NQITLWKYPSMK---LVAELL  428 (484)
T ss_pred             CCc----ccEEEEEEcCCCc-----EecccccC-Cceee-EEEcCCCCEEEEecCCCC-CcEEEEeccccc---eeeeec
Confidence            311    3478888988876     12233222 24444 899999988877654422 235677765322   222222


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~  435 (790)
                      .       +...+-..++||||..++......+
T Consensus       429 g-------H~~RVl~la~SPdg~~i~t~a~DET  454 (484)
T KOG0305|consen  429 G-------HTSRVLYLALSPDGETIVTGAADET  454 (484)
T ss_pred             C-------CcceeEEEEECCCCCEEEEecccCc
Confidence            2       5566788999999998876654444

>KOG0286|consensus

Probab=97.52  E-value=0.081  Score=50.99  Aligned_cols=161  Identities=14%  Similarity=0.144  Sum_probs=95.2

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECC--CCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSIN--EGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~--~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ..++..-++||.|+.++.-.-+ +...||-+...  .|..+......+.+++   ...-.|-+|+. |+ +.+      |
T Consensus        97 s~WVMtCA~sPSg~~VAcGGLd-N~Csiy~ls~~d~~g~~~v~r~l~gHtgy---lScC~f~dD~~-il-T~S------G  164 (343)
T KOG0286|consen   97 SSWVMTCAYSPSGNFVACGGLD-NKCSIYPLSTRDAEGNVRVSRELAGHTGY---LSCCRFLDDNH-IL-TGS------G  164 (343)
T ss_pred             ceeEEEEEECCCCCeEEecCcC-ceeEEEecccccccccceeeeeecCccce---eEEEEEcCCCc-eE-ecC------C
Confidence            4567889999999988775432 33334444322  2222222222233333   34677888876 44 454      4


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeec-CCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE-KENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                            -....++|+++|+     +...+..+..++.. ++.+| ++++++--+-+..   ..||-+...      .+.-
T Consensus       165 ------D~TCalWDie~g~-----~~~~f~GH~gDV~s-lsl~p~~~ntFvSg~cD~~---aklWD~R~~------~c~q  223 (343)
T KOG0286|consen  165 ------DMTCALWDIETGQ-----QTQVFHGHTGDVMS-LSLSPSDGNTFVSGGCDKS---AKLWDVRSG------QCVQ  223 (343)
T ss_pred             ------CceEEEEEcccce-----EEEEecCCcccEEE-EecCCCCCCeEEecccccc---eeeeeccCc------ceeE
Confidence                  3467889999887     34456666666665 78889 7774433333332   566655322      2222


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .    ++++...+..+.|-|+|.-++...+   -....++|+..
T Consensus       224 t----F~ghesDINsv~ffP~G~afatGSD---D~tcRlyDlRa  260 (343)
T KOG0286|consen  224 T----FEGHESDINSVRFFPSGDAFATGSD---DATCRLYDLRA  260 (343)
T ss_pred             e----ecccccccceEEEccCCCeeeecCC---CceeEEEeecC
Confidence            1    2347788899999999987755433   33467778765

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.51  E-value=0.01  Score=58.92  Aligned_cols=175  Identities=14%  Similarity=0.124  Sum_probs=92.7

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      ....++++|+||+.+++.....+...|++....+. ...+....       ....|.|+++|. +.+...   ...+   
T Consensus        24 ~~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~-~~~~~~g~-------~l~~PS~d~~g~-~W~v~~---~~~~---   88 (253)
T PF10647_consen   24 YDVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP-VRPVLTGG-------SLTRPSWDPDGW-VWTVDD---GSGG---   88 (253)
T ss_pred             ccccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc-ceeeccCC-------ccccccccCCCC-EEEEEc---CCCc---
Confidence            35678999999995555554445566888876544 33333211       155899999976 442322   1111   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccCCCe--EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC-CCCCcceeee
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF--TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD-PTATPECITC  403 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~lt~  403 (790)
                          ..+.+ +...++.    ....+.....  .+.. +.+||||.++++....+..  .+|++..+.- .++.+..++.
T Consensus        89 ----~~~~~-~~~~g~~----~~~~v~~~~~~~~I~~-l~vSpDG~RvA~v~~~~~~--~~v~va~V~r~~~g~~~~l~~  156 (253)
T PF10647_consen   89 ----VRVVR-DSASGTG----EPVEVDWPGLRGRITA-LRVSPDGTRVAVVVEDGGG--GRVYVAGVVRDGDGVPRRLTG  156 (253)
T ss_pred             ----eEEEE-ecCCCcc----eeEEecccccCCceEE-EEECCCCcEEEEEEecCCC--CeEEEEEEEeCCCCCcceecc
Confidence                22222 3223320    0222222111  3444 8999999999999876322  5677665421 1132334433


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      .+.-..........+.|+++++.++.......+... .+...+...
T Consensus       157 ~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~~~~~-~v~~dG~~~  201 (253)
T PF10647_consen  157 PRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGGPVVR-LVSVDGGPS  201 (253)
T ss_pred             ceEecccccCcceeeeecCCCEEEEEeCCCCCceeE-EEEccCCcc
Confidence            211111123456789999999877766444432222 444444433

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=97.50  E-value=0.05  Score=64.46  Aligned_cols=165  Identities=13%  Similarity=0.141  Sum_probs=89.5

Q ss_pred             CCCCEEEEEEEcc-CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeE-ccCCCEEEEEEcccccc
Q psy463          244 NVEPVLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRF-SSDGKKMLLILSHNQES  321 (790)
Q Consensus       244 ~~~~~~~~~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~-spDg~~i~~~~~~~~~~  321 (790)
                      .....+..+.|+| ||.+++....+.   .|.++|+.++.+........      ......| +++|+.|+ +.+    .
T Consensus       573 ~H~~~V~~l~~~p~~~~~L~Sgs~Dg---~v~iWd~~~~~~~~~~~~~~------~v~~v~~~~~~g~~la-tgs----~  638 (793)
T PLN00181        573 EHEKRVWSIDYSSADPTLLASGSDDG---SVKLWSINQGVSIGTIKTKA------NICCVQFPSESGRSLA-FGS----A  638 (793)
T ss_pred             CCCCCEEEEEEcCCCCCEEEEEcCCC---EEEEEECCCCcEEEEEecCC------CeEEEEEeCCCCCEEE-EEe----C
Confidence            3456688999997 677655544332   38888888776543332211      1235677 45788776 555    4


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                      +|        .|+++|+..++.    ....+..+...+.. +.|. ++..|+-.+.++.   ..||.+..........++
T Consensus       639 dg--------~I~iwD~~~~~~----~~~~~~~h~~~V~~-v~f~-~~~~lvs~s~D~~---ikiWd~~~~~~~~~~~~l  701 (793)
T PLN00181        639 DH--------KVYYYDLRNPKL----PLCTMIGHSKTVSY-VRFV-DSSTLVSSSTDNT---LKLWDLSMSISGINETPL  701 (793)
T ss_pred             CC--------eEEEEECCCCCc----cceEecCCCCCEEE-EEEe-CCCEEEEEECCCE---EEEEeCCCCccccCCcce
Confidence            55        689999875430    02233333333443 6776 6776666555533   455544321100011122


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      ..    +.+.......+.|++++.+++....   -..+++++...
T Consensus       702 ~~----~~gh~~~i~~v~~s~~~~~lasgs~---D~~v~iw~~~~  739 (793)
T PLN00181        702 HS----FMGHTNVKNFVGLSVSDGYIATGSE---TNEVFVYHKAF  739 (793)
T ss_pred             EE----EcCCCCCeeEEEEcCCCCEEEEEeC---CCEEEEEECCC
Confidence            21    1113344566889999987765432   23466666543

>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella

Probab=97.50  E-value=0.0014  Score=67.56  Aligned_cols=68  Identities=19%  Similarity=0.216  Sum_probs=59.0

Q ss_pred             hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463          715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC  788 (790)
Q Consensus       715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~  788 (790)
                      +|+.+.+++ ..|.|+|.|+.|+...++.+.-+++.|+.   +..+.++|+++|....  ..+.+.+..|+...
T Consensus       253 DP~~Y~~rL-~~PK~ii~atgDeFf~pD~~~~y~d~L~G---~K~lr~vPN~~H~~~~--~~~~~~l~~f~~~~  320 (367)
T PF10142_consen  253 DPYSYRDRL-TMPKYIINATGDEFFVPDSSNFYYDKLPG---EKYLRYVPNAGHSLIG--SDVVQSLRAFYNRI  320 (367)
T ss_pred             CHHHHHHhc-CccEEEEecCCCceeccCchHHHHhhCCC---CeeEEeCCCCCcccch--HHHHHHHHHHHHHH
Confidence            445888999 99999999999999999999999999985   4688999999999874  77778888888764

Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.

>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins

Probab=97.48  E-value=0.002  Score=63.89  Aligned_cols=61  Identities=10%  Similarity=0.150  Sum_probs=57.4

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHH
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFL  785 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl  785 (790)
                      .+|-|++.++.|.+++.+..+++.+..++.|.+++...+++..|.-+.  +++++.+.+.+|+
T Consensus       178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw  240 (240)
T PF05705_consen  178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW  240 (240)
T ss_pred             CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence            689999999999999999999999999999999999999999998876  8999999998884

>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3

Probab=97.48  E-value=0.0015  Score=63.94  Aligned_cols=244  Identities=10%  Similarity=0.072  Sum_probs=117.1

Q ss_pred             CCccEEEEEcCCCCccc--cccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQ--VTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE  576 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~  576 (790)
                      +++|+++-.|--+-...  +..-+...-...++  ..+.|+-+|.+|.......+.    ..+..-.++++.+.+..+.+
T Consensus        21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~--~~f~i~Hi~aPGqe~ga~~~p----~~y~yPsmd~LAe~l~~Vl~   94 (283)
T PF03096_consen   21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL--QNFCIYHIDAPGQEEGAATLP----EGYQYPSMDQLAEMLPEVLD   94 (283)
T ss_dssp             TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH--TTSEEEEEE-TTTSTT---------TT-----HHHHHCTHHHHHH
T ss_pred             CCCceEEEeccccccchHHHHHHhcchhHHHHh--hceEEEEEeCCCCCCCccccc----ccccccCHHHHHHHHHHHHH
Confidence            46899999998654311  00111111222333  589999999999765222222    12222346777777777776


Q ss_pred             hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc-------CCCCccCchhhhhhc
Q psy463          577 NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM-------GLPTFEDNLEGYKIA  649 (790)
Q Consensus       577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~  649 (790)
                      +++   .+.+.-+|-..|+++-..+|..+|+ ++.++|++++...-.....+...+.+       |..  .. ...|-..
T Consensus        95 ~f~---lk~vIg~GvGAGAnIL~rfAl~~p~-~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt--~~-~~d~Ll~  167 (283)
T PF03096_consen   95 HFG---LKSVIGFGVGAGANILARFALKHPE-RVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMT--SS-VKDYLLW  167 (283)
T ss_dssp             HHT------EEEEEETHHHHHHHHHHHHSGG-GEEEEEEES---S---HHHHHHHHHH-------CTT--S--HHHHHHH
T ss_pred             hCC---ccEEEEEeeccchhhhhhccccCcc-ceeEEEEEecCCCCccHHHHHHHHHhcccccccccc--cc-hHHhhhh
Confidence            544   4779999999999999999999986 89999999987654432222222211       111  00 0000000


Q ss_pred             cccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhc----CcchhcccccCCCCcCCcchhhhhhhhhhhhhccCC
Q psy463          650 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA----DIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRD  725 (790)
Q Consensus       650 ~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  725 (790)
                      -..  -....           ..  ..+-.....+.+.+.    +.......|.            .+.++....+.. .
T Consensus       168 h~F--g~~~~-----------~~--n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~------------~R~DL~~~~~~~-~  219 (283)
T PF03096_consen  168 HYF--GKEEE-----------EN--NSDLVQTYRQHLDERINPKNLALFLNSYN------------SRTDLSIERPSL-G  219 (283)
T ss_dssp             HHS---HHHH-----------HC--T-HHHHHHHHHHHT-TTHHHHHHHHHHHH------------T-----SECTTC-C
T ss_pred             ccc--ccccc-----------cc--cHHHHHHHHHHHhcCCCHHHHHHHHHHHh------------ccccchhhcCCC-C
Confidence            000  00000           00  000001111111110    0000011111            111122334455 8


Q ss_pred             ccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          726 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       726 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ||+|++.|..-+.  .+.+.++...|..  ....++.++++|=.+.. .+..+.+.+.-||+-
T Consensus       220 c~vLlvvG~~Sp~--~~~vv~~ns~Ldp--~~ttllkv~dcGglV~eEqP~klaea~~lFlQG  278 (283)
T PF03096_consen  220 CPVLLVVGDNSPH--VDDVVEMNSKLDP--TKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG  278 (283)
T ss_dssp             S-EEEEEETTSTT--HHHHHHHHHHS-C--CCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred             CCeEEEEecCCcc--hhhHHHHHhhcCc--ccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence            9999999998864  4566788887753  35789999999877776 888899999999874

Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.

>KOG1516|consensus

Probab=97.47  E-value=0.00041  Score=78.26  Aligned_cols=130  Identities=22%  Similarity=0.359  Sum_probs=81.1

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh-hhccCCc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA-GYRRLGT  561 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~-~~~~~~~  561 (790)
                      ++.-++.|....  ..+ .|++|++|||.....-...+.......++..+..+|+.++||-.. .|  |... .....|.
T Consensus        97 LylNV~tp~~~~--~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~-lG--F~st~d~~~~gN  170 (545)
T KOG1516|consen   97 LYLNVYTPQGCS--ESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGP-LG--FLSTGDSAAPGN  170 (545)
T ss_pred             ceEEEeccCCCc--cCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEeccccee-ce--eeecCCCCCCCc
Confidence            555677777532  112 899999999976432112222223345555568999999999421 22  1111 1111344


Q ss_pred             cchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCC
Q psy463          562 VEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPV  619 (790)
Q Consensus       562 ~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~  619 (790)
                      ..+.|+..+++|+.++   .+ -|+++|.|+|||.||..+..++..-. ...|..+|..++.
T Consensus       171 ~gl~Dq~~AL~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~  231 (545)
T KOG1516|consen  171 LGLFDQLLALRWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN  231 (545)
T ss_pred             ccHHHHHHHHHHHHHHHHhcC-CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence            5567999999999775   44 68999999999999999877665211 1355555555553

>KOG2048|consensus

Probab=97.45  E-value=0.058  Score=57.88  Aligned_cols=176  Identities=15%  Similarity=0.163  Sum_probs=98.3

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .....+...+.||||.++++..-.  ...||.+..+. ..+...-. .............|+-|+..++ +++   ....
T Consensus       380 k~~~nIs~~aiSPdg~~Ia~st~~--~~~iy~L~~~~-~vk~~~v~-~~~~~~~~a~~i~ftid~~k~~-~~s---~~~~  451 (691)
T KOG2048|consen  380 KEKENISCAAISPDGNLIAISTVS--RTKIYRLQPDP-NVKVINVD-DVPLALLDASAISFTIDKNKLF-LVS---KNIF  451 (691)
T ss_pred             CCccceeeeccCCCCCEEEEeecc--ceEEEEeccCc-ceeEEEec-cchhhhccceeeEEEecCceEE-EEe---cccc
Confidence            455667888999999966654321  22377777665 22221111 1111111244678899998877 444   1223


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                              .|..+++++... +  ....++.. .......+..|+||.+|+..+..     ..|+.+++++  .+.+++.
T Consensus       452 --------~le~~el~~ps~-k--el~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~-----g~I~v~nl~~--~~~~~l~  513 (691)
T KOG2048|consen  452 --------SLEEFELETPSF-K--ELKSIQSQAKCPSISRLVVSSDGNYIAAISTR-----GQIFVYNLET--LESHLLK  513 (691)
T ss_pred             --------eeEEEEecCcch-h--hhhccccccCCCcceeEEEcCCCCEEEEEecc-----ceEEEEEccc--ceeecch
Confidence                    567777665431 0  02222221 11222236789999999999866     6889999987  5555555


Q ss_pred             ecccccCCCcccEEEEEEecC-CcEEEEEeecCCCCeEEEEecCCCeEEEecc
Q psy463          403 CDLLTSANQKCSYSGATFSTN-VSYYVLSCIGPGIPEIMLFDKTGQRLLYWDT  454 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~d-g~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~  454 (790)
                      ..+      +..+.-..++|. -..++...+   ..+++-+|+..+++..|..
T Consensus       514 ~rl------n~~vTa~~~~~~~~~~lvvats---~nQv~efdi~~~~l~~ws~  557 (691)
T KOG2048|consen  514 VRL------NIDVTAAAFSPFVRNRLVVATS---NNQVFEFDIEARNLTRWSK  557 (691)
T ss_pred             hcc------CcceeeeeccccccCcEEEEec---CCeEEEEecchhhhhhhhh
Confidence            321      234455667744 345544432   3457777776555555433

>KOG0265|consensus

Probab=97.45  E-value=0.027  Score=54.39  Aligned_cols=246  Identities=11%  Similarity=0.078  Sum_probs=124.6

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      -.|+|||..++  +           ||.-++|.+.+..+..    +...-++....-++.+ .|..++.  .++-..   
T Consensus        53 ~~F~P~gs~~a--S-----------gG~Dr~I~LWnv~gdc----eN~~~lkgHsgAVM~l-~~~~d~s--~i~S~g---  109 (338)
T KOG0265|consen   53 IKFHPDGSCFA--S-----------GGSDRAIVLWNVYGDC----ENFWVLKGHSGAVMEL-HGMRDGS--HILSCG---  109 (338)
T ss_pred             EEECCCCCeEe--e-----------cCCcceEEEEeccccc----cceeeeccccceeEee-eeccCCC--EEEEec---
Confidence            37899998655  2           2334577777643321    2244444444444444 4444444  232221   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc--EEEEEeccCcce
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV--VAAWVNRVQNRA  271 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~~~~~~r~~~~~  271 (790)
                              ...+|+..|.++|+..+     ...                 ........+.  |--+  .+..+  +++..
T Consensus       110 --------tDk~v~~wD~~tG~~~r-----k~k-----------------~h~~~vNs~~--p~rrg~~lv~S--gsdD~  155 (338)
T KOG0265|consen  110 --------TDKTVRGWDAETGKRIR-----KHK-----------------GHTSFVNSLD--PSRRGPQLVCS--GSDDG  155 (338)
T ss_pred             --------CCceEEEEecccceeee-----hhc-----------------cccceeeecC--ccccCCeEEEe--cCCCc
Confidence                    11588899999987422     221                 1122222222  3323  22222  22333


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      ++.+.|..+.++..++...-      ....+.|..++.++. ...    -++        +|-++|+..++     ....
T Consensus       156 t~kl~D~R~k~~~~t~~~ky------qltAv~f~d~s~qv~-sgg----Idn--------~ikvWd~r~~d-----~~~~  211 (338)
T KOG0265|consen  156 TLKLWDIRKKEAIKTFENKY------QLTAVGFKDTSDQVI-SGG----IDN--------DIKVWDLRKND-----GLYT  211 (338)
T ss_pred             eEEEEeecccchhhccccce------eEEEEEeccccccee-ecc----ccC--------ceeeeccccCc-----ceEE
Confidence            47777777665554443211      123688888888876 443    233        67788886665     1334


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      |......+.+ ++.+++|..+.-.+-+     ..+.+.+...-.-..+|+.-.....+.-.-..-.-+|||+++.+.+..
T Consensus       212 lsGh~DtIt~-lsls~~gs~llsnsMd-----~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags  285 (338)
T KOG0265|consen  212 LSGHADTITG-LSLSRYGSFLLSNSMD-----NTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGS  285 (338)
T ss_pred             eecccCceee-EEeccCCCcccccccc-----ceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCcccccc
Confidence            4444455565 7789999876555544     333333332110122333321000000011223468999999887654


Q ss_pred             ecCCCCeEEEEecCCCeE
Q psy463          432 IGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       432 ~~~~~~~i~~~~~~~~~~  449 (790)
                      ...   .+|+.|..+..+
T Consensus       286 ~dr---~vyvwd~~~r~~  300 (338)
T KOG0265|consen  286 ADR---FVYVWDTTSRRI  300 (338)
T ss_pred             ccc---eEEEeecccccE
Confidence            444   377777665433

>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3

Probab=97.45  E-value=0.0003  Score=72.29  Aligned_cols=115  Identities=17%  Similarity=0.116  Sum_probs=65.0

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhc--CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADN--KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE  576 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~  576 (790)
                      ...|++|++||..+... ...|.......++..  .++.|+++|.......  .+..+....  ......+...+..|..
T Consensus        69 ~~~pt~iiiHGw~~~~~-~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n~--~~vg~~la~~l~~L~~  143 (331)
T PF00151_consen   69 PSKPTVIIIHGWTGSGS-SESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVANT--RLVGRQLAKFLSFLIN  143 (331)
T ss_dssp             TTSEEEEEE--TT-TT--TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEcCcCCccc-chhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhhH--HHHHHHHHHHHHHHHh
Confidence            45799999999887641 344555555666665  6899999998632111  111111100  0112334455666664


Q ss_pred             hCCCcCCCceEEEEechHHHHHHHHHhcCCC-CceEEEEEeCCC
Q psy463          577 NLPYIDKTRTAIWGWSYGGYATGLALALDPS-NVFKCGISVAPV  619 (790)
Q Consensus       577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~-~~~~~~v~~~~~  619 (790)
                      ..+ ++.++|.|+|||+||.+|..+..+... ..+..+.++.|.
T Consensus       144 ~~g-~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPA  186 (331)
T PF00151_consen  144 NFG-VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPA  186 (331)
T ss_dssp             HH----GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B
T ss_pred             hcC-CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcc
Confidence            233 788999999999999999998876654 356677777764

1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....

>KOG2394|consensus

Probab=97.43  E-value=0.013  Score=60.78  Aligned_cols=69  Identities=20%  Similarity=0.386  Sum_probs=41.7

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      ...+.|||||+.|+ +++    .+|      +  |.+++.++.+      ..-+.+.-+.-.--..||||||+|+.-..+
T Consensus       293 in~f~FS~DG~~LA-~VS----qDG------f--LRvF~fdt~e------Llg~mkSYFGGLLCvcWSPDGKyIvtGGED  353 (636)
T KOG2394|consen  293 INEFAFSPDGKYLA-TVS----QDG------F--LRIFDFDTQE------LLGVMKSYFGGLLCVCWSPDGKYIVTGGED  353 (636)
T ss_pred             ccceeEcCCCceEE-EEe----cCc------e--EEEeeccHHH------HHHHHHhhccceEEEEEcCCccEEEecCCc
Confidence            56889999999999 676    678      4  4455554443      333333212111127899999987665444


Q ss_pred             CCCceEEEEEE
Q psy463          379 GSPIVQHMYRI  389 (790)
Q Consensus       379 ~~~~~~~l~~~  389 (790)
                      .-   ..+|.+
T Consensus       354 DL---VtVwSf  361 (636)
T KOG2394|consen  354 DL---VTVWSF  361 (636)
T ss_pred             ce---EEEEEe
Confidence            21   455544

>KOG0275|consensus

Probab=97.43  E-value=0.011  Score=57.23  Aligned_cols=167  Identities=12%  Similarity=0.174  Sum_probs=92.6

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .....+..++||.|+..+...+.++.   +.+-.+.+|++-.-+.  +...   ......|++||..|+ .++    .+|
T Consensus       304 AHtkGvt~l~FSrD~SqiLS~sfD~t---vRiHGlKSGK~LKEfr--GHsS---yvn~a~ft~dG~~ii-saS----sDg  370 (508)
T KOG0275|consen  304 AHTKGVTCLSFSRDNSQILSASFDQT---VRIHGLKSGKCLKEFR--GHSS---YVNEATFTDDGHHII-SAS----SDG  370 (508)
T ss_pred             hhccCeeEEEEccCcchhhcccccce---EEEeccccchhHHHhc--Cccc---cccceEEcCCCCeEE-Eec----CCc
Confidence            34456789999999994444433332   5555667776643222  1122   245789999999998 666    567


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                              .+-+++..+++-..  +.+++. .+..+.. ...-|.+-.-+..-++.    ..+|++++.+  ..++..+.
T Consensus       371 --------tvkvW~~KtteC~~--Tfk~~~-~d~~vns-v~~~PKnpeh~iVCNrs----ntv~imn~qG--QvVrsfsS  432 (508)
T KOG0275|consen  371 --------TVKVWHGKTTECLS--TFKPLG-TDYPVNS-VILLPKNPEHFIVCNRS----NTVYIMNMQG--QVVRSFSS  432 (508)
T ss_pred             --------cEEEecCcchhhhh--hccCCC-Cccccee-EEEcCCCCceEEEEcCC----CeEEEEeccc--eEEeeecc
Confidence                    46677766554100  012222 1233333 22234433223333332    5788888876  33444443


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                      +-    ...+.+....+||.|.|++....   -..+|.+...+++
T Consensus       433 Gk----REgGdFi~~~lSpkGewiYcigE---D~vlYCF~~~sG~  470 (508)
T KOG0275|consen  433 GK----REGGDFINAILSPKGEWIYCIGE---DGVLYCFSVLSGK  470 (508)
T ss_pred             CC----ccCCceEEEEecCCCcEEEEEcc---CcEEEEEEeecCc
Confidence            21    13456777889999999876532   2346666655443

>KOG0283|consensus

Probab=97.41  E-value=0.042  Score=60.47  Aligned_cols=164  Identities=16%  Similarity=0.189  Sum_probs=81.0

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ...+++.++|.|-....+.+.--+.+.+||-+  ...  +.+.-.+.    .+......|+|||+..+ +.+    -.| 
T Consensus       408 HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI--~d~--~Vv~W~Dl----~~lITAvcy~PdGk~av-IGt----~~G-  473 (712)
T KOG0283|consen  408 HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSI--SDK--KVVDWNDL----RDLITAVCYSPDGKGAV-IGT----FNG-  473 (712)
T ss_pred             cCCeeEEEEecccCCCcEeecccccceEEeec--CcC--eeEeehhh----hhhheeEEeccCCceEE-EEE----ecc-
Confidence            34566677777755533333333334444433  222  21211111    02355789999999766 555    345 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCccccc-----CCCeEEeEEEeeecC-CCEEEEEEcCCCCceEEEEEEEcCCCCCCc
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLT-----RGRFTVTEILAWDEK-ENNVYFLSTQGSPIVQHMYRINIADPTATP  398 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-----~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~  398 (790)
                           .  ..+++..+.+..... -..+.     .+. .+++ +++.|. ...|.+++++     .+|.++++..  .  
T Consensus       474 -----~--C~fY~t~~lk~~~~~-~I~~~~~Kk~~~~-rITG-~Q~~p~~~~~vLVTSnD-----SrIRI~d~~~--~--  534 (712)
T KOG0283|consen  474 -----Y--CRFYDTEGLKLVSDF-HIRLHNKKKKQGK-RITG-LQFFPGDPDEVLVTSND-----SRIRIYDGRD--K--  534 (712)
T ss_pred             -----E--EEEEEccCCeEEEee-eEeeccCccccCc-eeee-eEecCCCCCeEEEecCC-----CceEEEeccc--h--
Confidence                 2  333333332200000 00011     122 3555 555543 3368888888     5666666533  1  


Q ss_pred             ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          399 ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       399 ~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                       .|.+-+.+.. +...-..++|+.||++|+..+..   ..||+++...
T Consensus       535 -~lv~KfKG~~-n~~SQ~~Asfs~Dgk~IVs~seD---s~VYiW~~~~  577 (712)
T KOG0283|consen  535 -DLVHKFKGFR-NTSSQISASFSSDGKHIVSASED---SWVYIWKNDS  577 (712)
T ss_pred             -hhhhhhcccc-cCCcceeeeEccCCCEEEEeecC---ceEEEEeCCC
Confidence             2222111111 23344568899999999887644   3488877654

>COG3150 Predicted esterase [General function prediction only]

Probab=97.41  E-value=0.0034  Score=55.13  Aligned_cols=51  Identities=14%  Similarity=0.275  Sum_probs=37.3

Q ss_pred             EEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH
Q psy463          728 YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD  786 (790)
Q Consensus       728 ~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~  786 (790)
                      +.++.-+.|++...+++.+.+....       ..+..|.+|.|.. -...++.|..|+.
T Consensus       137 ~~lL~qtgDEvLDyr~a~a~y~~~~-------~~V~dgg~H~F~~-f~~~l~~i~aF~g  187 (191)
T COG3150         137 LVLLSQTGDEVLDYRQAVAYYHPCY-------EIVWDGGDHKFKG-FSRHLQRIKAFKG  187 (191)
T ss_pred             EEeecccccHHHHHHHHHHHhhhhh-------heeecCCCccccc-hHHhHHHHHHHhc
Confidence            3444555699998888888877654       3577889999984 5667788888864

>KOG0645|consensus

Probab=97.39  E-value=0.028  Score=53.41  Aligned_cols=22  Identities=45%  Similarity=0.596  Sum_probs=18.1

Q ss_pred             cCCceeEeCCCCCceEEEEecC
Q psy463            8 SSSSALWFSPSGNNLAYASFDD   29 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~   29 (790)
                      .+..+.+|||.|+.||..|++.
T Consensus        62 rsVRsvAwsp~g~~La~aSFD~   83 (312)
T KOG0645|consen   62 RSVRSVAWSPHGRYLASASFDA   83 (312)
T ss_pred             heeeeeeecCCCcEEEEeeccc
Confidence            4567889999999999988743

>KOG0282|consensus

Probab=97.36  E-value=0.017  Score=59.18  Aligned_cols=274  Identities=13%  Similarity=0.058  Sum_probs=142.6

Q ss_pred             CceeEeCC-CCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463           10 SSALWFSP-SGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus        10 ~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      .+++.|.| -|+-|+ ...-++.+.||.+--.++-       ......+...+..+.|++++..++-..-   ...+.++
T Consensus       217 vsai~~fp~~~hLlL-S~gmD~~vklW~vy~~~~~-------lrtf~gH~k~Vrd~~~s~~g~~fLS~sf---D~~lKlw  285 (503)
T KOG0282|consen  217 VSAIQWFPKKGHLLL-SGGMDGLVKLWNVYDDRRC-------LRTFKGHRKPVRDASFNNCGTSFLSASF---DRFLKLW  285 (503)
T ss_pred             cchhhhccceeeEEE-ecCCCceEEEEEEecCcce-------ehhhhcchhhhhhhhccccCCeeeeeec---ceeeeee
Confidence            46778999 555444 4445666666655444441       1122223333455678777776544432   3567889


Q ss_pred             eCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc
Q psy463           89 SINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR  168 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~  168 (790)
                      |..||+|..-+....--      .--.|.||+..+++.-            |.-..|-.+|+-+++     +.+.....-
T Consensus       286 DtETG~~~~~f~~~~~~------~cvkf~pd~~n~fl~G------------~sd~ki~~wDiRs~k-----vvqeYd~hL  342 (503)
T KOG0282|consen  286 DTETGQVLSRFHLDKVP------TCVKFHPDNQNIFLVG------------GSDKKIRQWDIRSGK-----VVQEYDRHL  342 (503)
T ss_pred             ccccceEEEEEecCCCc------eeeecCCCCCcEEEEe------------cCCCcEEEEeccchH-----HHHHHHhhh
Confidence            99999988765543211      1237789997766533            223378888887774     333333332


Q ss_pred             eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463          169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV  248 (790)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~  248 (790)
                      ..+..+.-. +.+   ..|++.+...        .-.||-....-        +.++..               ....+.
T Consensus       343 g~i~~i~F~-~~g---~rFissSDdk--------s~riWe~~~~v--------~ik~i~---------------~~~~hs  387 (503)
T KOG0282|consen  343 GAILDITFV-DEG---RRFISSSDDK--------SVRIWENRIPV--------PIKNIA---------------DPEMHT  387 (503)
T ss_pred             hheeeeEEc-cCC---ceEeeeccCc--------cEEEEEcCCCc--------cchhhc---------------chhhcc
Confidence            233333222 222   2455443211        13444332211        221110               023344


Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCC---ceeEEEEEeCCCcccc-cCCceeEccCCCEEEEEEccccccCCC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEG---TCDVVFSRDLDRGWFE-PFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g---~~~~l~~~~~~~~~~~-~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ...++-+|+|++++..+-+.   .|++..+...   ..+..++    +.+.. ..-...|||||+.|+ +..    .+| 
T Consensus       388 mP~~~~~P~~~~~~aQs~dN---~i~ifs~~~~~r~nkkK~fe----Gh~vaGys~~v~fSpDG~~l~-SGd----sdG-  454 (503)
T KOG0282|consen  388 MPCLTLHPNGKWFAAQSMDN---YIAIFSTVPPFRLNKKKRFE----GHSVAGYSCQVDFSPDGRTLC-SGD----SDG-  454 (503)
T ss_pred             CcceecCCCCCeehhhccCc---eEEEEecccccccCHhhhhc----ceeccCceeeEEEcCCCCeEE-eec----CCc-
Confidence            56778899999544433221   2444432211   1122222    11221 123678999999886 443    566 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                             .++.+|..+-+     ....|..++-.... ..|.|-....+.++..
T Consensus       455 -------~v~~wdwkt~k-----l~~~lkah~~~ci~-v~wHP~e~Skvat~~w  495 (503)
T KOG0282|consen  455 -------KVNFWDWKTTK-----LVSKLKAHDQPCIG-VDWHPVEPSKVATCGW  495 (503)
T ss_pred             -------cEEEeechhhh-----hhhccccCCcceEE-EEecCCCcceeEeccc
Confidence                   78999987765     13445444433444 6798876655555443

>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.26  E-value=0.00066  Score=59.34  Aligned_cols=127  Identities=20%  Similarity=0.264  Sum_probs=79.9

Q ss_pred             HHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhh
Q psy463          568 INVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYK  647 (790)
Q Consensus       568 ~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  647 (790)
                      .+-.+|+++.   +=+.+..+.|.||||+.|+.+..++|. .|..+|+.+|+.+...+        +|..  .+. +.|-
T Consensus        88 ~AyerYv~eE---alpgs~~~sgcsmGayhA~nfvfrhP~-lftkvialSGvYdardf--------fg~y--ydd-Dv~y  152 (227)
T COG4947          88 RAYERYVIEE---ALPGSTIVSGCSMGAYHAANFVFRHPH-LFTKVIALSGVYDARDF--------FGGY--YDD-DVYY  152 (227)
T ss_pred             HHHHHHHHHh---hcCCCccccccchhhhhhhhhheeChh-HhhhheeecceeeHHHh--------cccc--ccC-ceee
Confidence            3445566652   112457889999999999999999986 99999999999776422        1111  000 0000


Q ss_pred             hccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCcc
Q psy463          648 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQ  727 (790)
Q Consensus       648 ~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P  727 (790)
                       .+|..           .+.|..|+                                             ..+++++++-
T Consensus       153 -nsP~d-----------ylpg~~dp---------------------------------------------~~l~rlr~~~  175 (227)
T COG4947         153 -NSPSD-----------YLPGLADP---------------------------------------------FRLERLRRID  175 (227)
T ss_pred             -cChhh-----------hccCCcCh---------------------------------------------HHHHHHhhcc
Confidence             11111           11111110                                             3355554668


Q ss_pred             EEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCC
Q psy463          728 YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEH  768 (790)
Q Consensus       728 ~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H  768 (790)
                      +.++.|..|+..+  +...|.+.|.++.++..+.+..+..|
T Consensus       176 ~vfc~G~e~~~L~--~~~~L~~~l~dKqipaw~~~WggvaH  214 (227)
T COG4947         176 MVFCIGDEDPFLD--NNQHLSRLLSDKQIPAWMHVWGGVAH  214 (227)
T ss_pred             EEEEecCcccccc--chHHHHHHhccccccHHHHHhccccc
Confidence            8899999888765  56678888888888877777766666

>KOG1445|consensus

Probab=97.25  E-value=0.017  Score=61.17  Aligned_cols=144  Identities=13%  Similarity=0.112  Sum_probs=85.7

Q ss_pred             ccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCC
Q psy463          202 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINE  280 (790)
Q Consensus       202 ~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~  280 (790)
                      .+-.||++...+.......+...||                 ....-+..+.|.|=.. .++...-+.   .|-++|+.+
T Consensus       650 g~i~lWr~~a~gl~e~~~tPe~~lt-----------------~h~eKI~slRfHPLAadvLa~asyd~---Ti~lWDl~~  709 (1012)
T KOG1445|consen  650 GQINLWRLTANGLPENEMTPEKILT-----------------IHGEKITSLRFHPLAADVLAVASYDS---TIELWDLAN  709 (1012)
T ss_pred             ceEEEEEeccCCCCcccCCcceeee-----------------cccceEEEEEecchhhhHhhhhhccc---eeeeeehhh
Confidence            3468999988775432222223444                 5566688899998665 443333222   288888887


Q ss_pred             CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE-
Q psy463          281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV-  359 (790)
Q Consensus       281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~-  359 (790)
                      ++.+.-+..-     .+...+++|||||+.++ ++.    ++|        .|.++....++       .++-.+...+ 
T Consensus       710 ~~~~~~l~gH-----tdqIf~~AWSpdGr~~A-tVc----KDg--------~~rVy~Prs~e-------~pv~Eg~gpvg  764 (1012)
T KOG1445|consen  710 AKLYSRLVGH-----TDQIFGIAWSPDGRRIA-TVC----KDG--------TLRVYEPRSRE-------QPVYEGKGPVG  764 (1012)
T ss_pred             hhhhheeccC-----cCceeEEEECCCCccee-eee----cCc--------eEEEeCCCCCC-------CccccCCCCcc
Confidence            7654322211     11245899999999999 555    577        68888877664       2332222111 


Q ss_pred             --eEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463          360 --TEILAWDEKENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       360 --~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                        ..-+.|.-||+.|+..+.+.. .+++|..++.
T Consensus       765 tRgARi~wacdgr~viv~Gfdk~-SeRQv~~Y~A  797 (1012)
T KOG1445|consen  765 TRGARILWACDGRIVIVVGFDKS-SERQVQMYDA  797 (1012)
T ss_pred             CcceeEEEEecCcEEEEeccccc-chhhhhhhhh
Confidence              122679999999888876622 1244544443

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=97.24  E-value=0.0057  Score=68.81  Aligned_cols=33  Identities=15%  Similarity=0.294  Sum_probs=26.5

Q ss_pred             CCceeEeCCCCCceEE-EEecC--CceeEEEecccC
Q psy463            9 SSSALWFSPSGNNLAY-ASFDD--NRTVIMTIPFYG   41 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf-~~~~~--~~~~~~~~~~~g   41 (790)
                      ...+|.|||||++||| ++...  +...||+..+..
T Consensus       351 ~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t  386 (912)
T TIGR02171       351 SVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNA  386 (912)
T ss_pred             ceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhc
Confidence            3467999999999999 77766  688899877653

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT)

Probab=97.21  E-value=0.0026  Score=61.77  Aligned_cols=104  Identities=17%  Similarity=0.199  Sum_probs=57.5

Q ss_pred             cEEEEEcCCCCccccccccccchHHHH-------HhcCCeEEEEEcCCCCC--CChhhhHhhhhccCCccchhHHHHHHH
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYL-------ADNKDIVVAYIDGRNSA--LKGNTLKYAGYRRLGTVEIYDQINVTR  572 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~-------~~~~G~~v~~~d~rG~~--~~g~~~~~~~~~~~~~~~~~D~~~~~~  572 (790)
                      ..|+|+||..++..   ++.. +....       .....+.++.+|+....  ..|....         ...+-+..+++
T Consensus         5 ~pVlFIhG~~Gs~~---q~rs-l~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~---------~q~~~~~~~i~   71 (225)
T PF07819_consen    5 IPVLFIHGNAGSYK---QVRS-LASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQ---------RQAEFLAEAIK   71 (225)
T ss_pred             CEEEEECcCCCCHh---HHHH-HHHHHhhhhhhccCccceeEEEeccCccccccccccHH---------HHHHHHHHHHH
Confidence            45789999877621   2111 11111       11235778888876421  1221111         12333445566


Q ss_pred             HHHHhC--CCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEeCC
Q psy463          573 YLQENL--PYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISVAP  618 (790)
Q Consensus       573 ~l~~~~--~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~~~  618 (790)
                      .+.+.+  ......+|.|+||||||.++-.++...+.  ..++.++..+.
T Consensus        72 ~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~t  121 (225)
T PF07819_consen   72 YILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGT  121 (225)
T ss_pred             HHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcC
Confidence            655533  12456899999999999999887764431  34666665543

This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane

>KOG1273|consensus

Probab=97.19  E-value=0.26  Score=48.08  Aligned_cols=252  Identities=15%  Similarity=0.175  Sum_probs=132.5

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      .||+-|..++.-..             -+.+.++|+.+-.     ..+-++.+-..+. -+.|+.+++.  ...+.    
T Consensus        30 ~Fs~~G~~lAvGc~-------------nG~vvI~D~~T~~-----iar~lsaH~~pi~-sl~WS~dgr~--LltsS----   84 (405)
T KOG1273|consen   30 QFSRWGDYLAVGCA-------------NGRVVIYDFDTFR-----IARMLSAHVRPIT-SLCWSRDGRK--LLTSS----   84 (405)
T ss_pred             EeccCcceeeeecc-------------CCcEEEEEccccc-----hhhhhhcccccee-EEEecCCCCE--eeeec----
Confidence            78999998886442             2268888887652     2344444433333 3577777763  22222    


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc--EEEEEeccCcceE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV--VAAWVNRVQNRAR  272 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~~~~~~r~~~~~~  272 (790)
                             +...|-+.|+-.|..     ..++.                  .+.-+..+.|.|-.+  .++..-+.+    
T Consensus        85 -------~D~si~lwDl~~gs~-----l~rir------------------f~spv~~~q~hp~k~n~~va~~~~~s----  130 (405)
T KOG1273|consen   85 -------RDWSIKLWDLLKGSP-----LKRIR------------------FDSPVWGAQWHPRKRNKCVATIMEES----  130 (405)
T ss_pred             -------CCceeEEEeccCCCc-----eeEEE------------------ccCccceeeeccccCCeEEEEEecCC----
Confidence                   114566667766642     12222                  233455778888655  333332222    


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccc-cCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFE-PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~-~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      -++++...+..+.|....  .+-.. ....-.|.+-|++|+ +..    ..|        .|.++++++-+-..   .-+
T Consensus       131 p~vi~~s~~~h~~Lp~d~--d~dln~sas~~~fdr~g~yIi-tGt----sKG--------kllv~~a~t~e~va---s~r  192 (405)
T KOG1273|consen  131 PVVIDFSDPKHSVLPKDD--DGDLNSSASHGVFDRRGKYII-TGT----SKG--------KLLVYDAETLECVA---SFR  192 (405)
T ss_pred             cEEEEecCCceeeccCCC--ccccccccccccccCCCCEEE-Eec----Ccc--------eEEEEecchheeee---eee
Confidence            344444444444443321  11111 012234888999887 444    456        57778877654000   112


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE-c--CCCCCCcceeeecccccCCCcccEEEEEEecCCcEEE
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN-I--ADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYV  428 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~-~--~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~  428 (790)
                      +|. .-.+.. +.++..|+.+++.+.+.-   .+.|.+. +  .+.+++++..-. +.+.+ +.-.+....||.||.|++
T Consensus       193 its-~~~IK~-I~~s~~g~~liiNtsDRv---IR~ye~~di~~~~r~~e~e~~~K-~qDvV-Nk~~Wk~ccfs~dgeYv~  265 (405)
T KOG1273|consen  193 ITS-VQAIKQ-IIVSRKGRFLIINTSDRV---IRTYEISDIDDEGRDGEVEPEHK-LQDVV-NKLQWKKCCFSGDGEYVC  265 (405)
T ss_pred             ech-heeeeE-EEEeccCcEEEEecCCce---EEEEehhhhcccCccCCcChhHH-HHHHH-hhhhhhheeecCCccEEE
Confidence            232 112333 668889999998887722   3334332 2  222334332110 11011 344566678999999987


Q ss_pred             EEeecCCCCeEEEEecCCCeEEEe
Q psy463          429 LSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       429 ~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                      ...  ...-.+|++....+.+..+
T Consensus       266 a~s--~~aHaLYIWE~~~GsLVKI  287 (405)
T KOG1273|consen  266 AGS--ARAHALYIWEKSIGSLVKI  287 (405)
T ss_pred             ecc--ccceeEEEEecCCcceeee
Confidence            765  2256789988777666544

>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised

Probab=97.17  E-value=0.042  Score=56.24  Aligned_cols=129  Identities=11%  Similarity=-0.044  Sum_probs=74.1

Q ss_pred             CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh-hhhH------
Q psy463          480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG-NTLK------  552 (790)
Q Consensus       480 g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g-~~~~------  552 (790)
                      |.+-.-.+++|..    .+....+||++||...+.. ... .......-+.+.|++++.+..+.-.... ..+.      
T Consensus        70 ~~~~flaL~~~~~----~~~~~G~vIilp~~g~~~d-~p~-~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~  143 (310)
T PF12048_consen   70 GEERFLALWRPAN----SAKPQGAVIILPDWGEHPD-WPG-LIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEV  143 (310)
T ss_pred             CCEEEEEEEeccc----CCCCceEEEEecCCCCCCC-cHh-HHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCC
Confidence            4444456677765    4566789999999776521 111 1223344556799999998776511000 0000      


Q ss_pred             -hh---------------------hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCce
Q psy463          553 -YA---------------------GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVF  610 (790)
Q Consensus       553 -~~---------------------~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~  610 (790)
                       ..                     ....+......-+.+++.++.+ ++   ..+|+|+||+.|++++..++...+....
T Consensus       144 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~-~~---~~~ivlIg~G~gA~~~~~~la~~~~~~~  219 (310)
T PF12048_consen  144 PSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQ-QG---GKNIVLIGHGTGAGWAARYLAEKPPPMP  219 (310)
T ss_pred             CCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHh-cC---CceEEEEEeChhHHHHHHHHhcCCCccc
Confidence             00                     0000000112233344555554 44   3569999999999999999987776567


Q ss_pred             EEEEEeCC
Q psy463          611 KCGISVAP  618 (790)
Q Consensus       611 ~~~v~~~~  618 (790)
                      .+.|.+++
T Consensus       220 daLV~I~a  227 (310)
T PF12048_consen  220 DALVLINA  227 (310)
T ss_pred             CeEEEEeC
Confidence            77777776

This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.

>KOG0263|consensus

Probab=97.17  E-value=0.0085  Score=65.12  Aligned_cols=162  Identities=16%  Similarity=0.194  Sum_probs=99.4

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ...+-+...++|||.+++...+.+..   +-+..+.+..+..++.....     +.-..+|+|-|=+++ +++    .++
T Consensus       449 GH~GPVyg~sFsPd~rfLlScSED~s---vRLWsl~t~s~~V~y~GH~~-----PVwdV~F~P~GyYFa-tas----~D~  515 (707)
T KOG0263|consen  449 GHSGPVYGCSFSPDRRFLLSCSEDSS---VRLWSLDTWSCLVIYKGHLA-----PVWDVQFAPRGYYFA-TAS----HDQ  515 (707)
T ss_pred             cCCCceeeeeecccccceeeccCCcc---eeeeecccceeEEEecCCCc-----ceeeEEecCCceEEE-ecC----CCc
Confidence            44555678899999995444433221   66666777777777753222     233577899986655 555    344


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                            ...||-.|  ...      +.++-.+ .-++. -..|.|++.+++--+.+.   ..++|-+..    |...++-
T Consensus       516 ------tArLWs~d--~~~------PlRifaghlsDV~-cv~FHPNs~Y~aTGSsD~---tVRlWDv~~----G~~VRiF  573 (707)
T KOG0263|consen  516 ------TARLWSTD--HNK------PLRIFAGHLSDVD-CVSFHPNSNYVATGSSDR---TVRLWDVST----GNSVRIF  573 (707)
T ss_pred             ------eeeeeecc--cCC------chhhhcccccccc-eEEECCcccccccCCCCc---eEEEEEcCC----CcEEEEe
Confidence                  44666655  344      4444333 33333 367899988654443332   256665543    4445555


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      ++      +...+..+.+||+|++++-   +..-..|.++|+.++++
T Consensus       574 ~G------H~~~V~al~~Sp~Gr~LaS---g~ed~~I~iWDl~~~~~  611 (707)
T KOG0263|consen  574 TG------HKGPVTALAFSPCGRYLAS---GDEDGLIKIWDLANGSL  611 (707)
T ss_pred             cC------CCCceEEEEEcCCCceEee---cccCCcEEEEEcCCCcc
Confidence            43      6778899999999998854   33456688999887544

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.14  E-value=0.36  Score=48.85  Aligned_cols=127  Identities=17%  Similarity=0.278  Sum_probs=70.5

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc-cC----CCeEEeE--EEeeecCCCE
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL-TR----GRFTVTE--ILAWDEKENN  371 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l-t~----~~~~~~~--~~~~s~dg~~  371 (790)
                      +..+.++.++.+++|..-     +|        .+|.+|+.+.+- +-..+..+ +.    ..|...+  .+++++..++
T Consensus       186 f~~~~~~~~~~~~~F~Sy-----~G--------~v~~~dlsg~~~-~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~r  251 (342)
T PF06433_consen  186 FEHPAYSRDGGRLYFVSY-----EG--------NVYSADLSGDSA-KFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGR  251 (342)
T ss_dssp             -S--EEETTTTEEEEEBT-----TS--------EEEEEEETTSSE-EEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTE
T ss_pred             ccccceECCCCeEEEEec-----CC--------EEEEEeccCCcc-cccCcccccCccccccCcCCcceeeeeeccccCe
Confidence            346777778777886543     56        789999876640 00001111 21    2333321  3677888888


Q ss_pred             EEEEEcCCC-----CceEEEEEEEcCCCCCC-cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          372 VYFLSTQGS-----PIVQHMYRINIADPTAT-PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       372 l~~~~~~~~-----~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      ||+.-..+.     -....||.+++++  ++ +.++.-        .....++.+|.|.+=+++..+.. ...|+++|..
T Consensus       252 lyvLMh~g~~gsHKdpgteVWv~D~~t--~krv~Ri~l--------~~~~~Si~Vsqd~~P~L~~~~~~-~~~l~v~D~~  320 (342)
T PF06433_consen  252 LYVLMHQGGEGSHKDPGTEVWVYDLKT--HKRVARIPL--------EHPIDSIAVSQDDKPLLYALSAG-DGTLDVYDAA  320 (342)
T ss_dssp             EEEEEEE--TT-TTS-EEEEEEEETTT--TEEEEEEEE--------EEEESEEEEESSSS-EEEEEETT-TTEEEEEETT
T ss_pred             EEEEecCCCCCCccCCceEEEEEECCC--CeEEEEEeC--------CCccceEEEccCCCcEEEEEcCC-CCeEEEEeCc
Confidence            888765421     1247899999987  33 222321        12344788899888666655442 3678999988


Q ss_pred             CCeEE
Q psy463          446 GQRLL  450 (790)
Q Consensus       446 ~~~~~  450 (790)
                      +++..
T Consensus       321 tGk~~  325 (342)
T PF06433_consen  321 TGKLV  325 (342)
T ss_dssp             T--EE
T ss_pred             CCcEE
Confidence            76544

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PLN02209 serine carboxypeptidase

Probab=97.12  E-value=0.023  Score=60.95  Aligned_cols=63  Identities=19%  Similarity=0.162  Sum_probs=50.9

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCC--------------------c-eEEEEcCCCCCcCCCcchHHHHHHHH
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI--------------------M-FQSQTYPDEEHGLIGVRPHFYHTLER  783 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~--------------------~-~~~~~~p~~~H~~~~~~~~~~~~i~~  783 (790)
                      ..++||..|..|.+|+...++.+.+.|+-.+.                    . ..++.+-++||+....++..+..+.+
T Consensus       351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp~qP~~al~m~~~  430 (437)
T PLN02209        351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAEYLPEESSIMFQR  430 (437)
T ss_pred             CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcCcCHHHHHHHHHH
Confidence            57999999999999999999999888762111                    1 55677788999994488899999999


Q ss_pred             HHHH
Q psy463          784 FLDS  787 (790)
Q Consensus       784 fl~~  787 (790)
                      |+..
T Consensus       431 fi~~  434 (437)
T PLN02209        431 WISG  434 (437)
T ss_pred             HHcC
Confidence            9864

>KOG0319|consensus

Probab=97.10  E-value=0.32  Score=53.04  Aligned_cols=322  Identities=12%  Similarity=0.128  Sum_probs=151.0

Q ss_pred             eEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeCCC
Q psy463           13 LWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINE   92 (790)
Q Consensus        13 ~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~~~   92 (790)
                      .+||++|+.|+.+-.    ..|..+...-+..    ..|....-.....+...-++|..++....|.+   .++++..++
T Consensus        25 ~~~s~nG~~L~t~~~----d~Vi~idv~t~~~----~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~---llrv~~L~t   93 (775)
T KOG0319|consen   25 VAWSSNGQHLYTACG----DRVIIIDVATGSI----ALPSGSNEDEDEITALALTPDEEVLVTASRSQ---LLRVWSLPT   93 (775)
T ss_pred             eeECCCCCEEEEecC----ceEEEEEccCCce----ecccCCccchhhhheeeecCCccEEEEeeccc---eEEEEEccc
Confidence            889999998876532    2233333333320    01111111111122233445667776666654   456677777


Q ss_pred             CeeeEEEeecCCCCccccCCcc----ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc
Q psy463           93 GTCDVVFSRDLDRGWFEPFDHL----RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR  168 (790)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~----~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~  168 (790)
                      |++.+.        |......|    .|+|-|..++             .||.-+.+-+.|+.++.     ..-.+...+
T Consensus        94 gk~irs--------wKa~He~Pvi~ma~~~~g~LlA-------------tggaD~~v~VWdi~~~~-----~th~fkG~g  147 (775)
T KOG0319|consen   94 GKLIRS--------WKAIHEAPVITMAFDPTGTLLA-------------TGGADGRVKVWDIKNGY-----CTHSFKGHG  147 (775)
T ss_pred             chHhHh--------HhhccCCCeEEEEEcCCCceEE-------------eccccceEEEEEeeCCE-----EEEEecCCC
Confidence            754432        22211223    6777774333             12233356666666552     122233222


Q ss_pred             eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463          169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV  248 (790)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~  248 (790)
                      ..+ ....+.+.-..-+++...           ....++++|+..+.. -+   ..+.                 ....-
T Consensus       148 GvV-ssl~F~~~~~~~lL~sg~-----------~D~~v~vwnl~~~~t-cl---~~~~-----------------~H~S~  194 (775)
T KOG0319|consen  148 GVV-SSLLFHPHWNRWLLASGA-----------TDGTVRVWNLNDKRT-CL---HTMI-----------------LHKSA  194 (775)
T ss_pred             ceE-EEEEeCCccchhheeecC-----------CCceEEEEEcccCch-HH---HHHH-----------------hhhhh
Confidence            222 223333332221222221           225777778775431 00   1111                 33445


Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccC---CC-EEEEEEccccccCCC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD---GK-KMLLILSHNQESDGS  324 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spD---g~-~i~~~~~~~~~~~g~  324 (790)
                      +..+.+++|+.-+....|+.-   +++.|+..-++..+...-      +...+..+-++   ++ .++++++    .+| 
T Consensus       195 vtsL~~~~d~~~~ls~~RDkv---i~vwd~~~~~~l~~lp~y------e~~E~vv~l~~~~~~~~~~~~TaG----~~g-  260 (775)
T KOG0319|consen  195 VTSLAFSEDSLELLSVGRDKV---IIVWDLVQYKKLKTLPLY------ESLESVVRLREELGGKGEYIITAG----GSG-  260 (775)
T ss_pred             eeeeeeccCCceEEEeccCcE---EEEeehhhhhhhheechh------hheeeEEEechhcCCcceEEEEec----CCc-
Confidence            678999999997777777653   778887544333222210      00223444443   33 1333555    345 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                             .+..+|.++++-     ....... .-+........-.++ ++..+++     .+|+.++.+.  .   .++.
T Consensus       261 -------~~~~~d~es~~~-----~~~~~~~~~~e~~~~~~~~~~~~-~l~vtae-----Qnl~l~d~~~--l---~i~k  317 (775)
T KOG0319|consen  261 -------VVQYWDSESGKC-----VYKQRQSDSEEIDHLLAIESMSQ-LLLVTAE-----QNLFLYDEDE--L---TIVK  317 (775)
T ss_pred             -------eEEEEecccchh-----hhhhccCCchhhhcceeccccCc-eEEEEcc-----ceEEEEEccc--c---EEeh
Confidence                   577788877651     1111111 111222122223344 4444444     5677776544  2   1222


Q ss_pred             cccccCCCcccEEEEE-EecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          404 DLLTSANQKCSYSGAT-FSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~-~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      .+   ++.+..+.... +.|+.++++...+.   |++.+++..+-
T Consensus       318 ~i---vG~ndEI~Dm~~lG~e~~~laVATNs---~~lr~y~~~~~  356 (775)
T KOG0319|consen  318 QI---VGYNDEILDMKFLGPEESHLAVATNS---PELRLYTLPTS  356 (775)
T ss_pred             hh---cCCchhheeeeecCCccceEEEEeCC---CceEEEecCCC
Confidence            11   22444555555 56777777776443   44666666553

>KOG0640|consensus

Probab=97.09  E-value=0.037  Score=53.51  Aligned_cols=77  Identities=10%  Similarity=0.124  Sum_probs=47.5

Q ss_pred             CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ...+..+.+|+.|+ ++.-+..+.    |.+.|--+++|..-....-+..-   .-+..|+.|||+|. ...    .+. 
T Consensus       261 t~ai~~V~Ys~t~~lYvTaSkDG~----IklwDGVS~rCv~t~~~AH~gse---vcSa~Ftkn~kyiL-sSG----~DS-  327 (430)
T KOG0640|consen  261 TGAITQVRYSSTGSLYVTASKDGA----IKLWDGVSNRCVRTIGNAHGGSE---VCSAVFTKNGKYIL-SSG----KDS-  327 (430)
T ss_pred             ccceeEEEecCCccEEEEeccCCc----EEeeccccHHHHHHHHhhcCCce---eeeEEEccCCeEEe-ecC----Ccc-
Confidence            34567899999999 555544443    88888777777544433211111   33789999999775 322    333 


Q ss_pred             CCcCcccEEEEEEcCCCC
Q psy463          325 TPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~  342 (790)
                             -++++.+.+|.
T Consensus       328 -------~vkLWEi~t~R  338 (430)
T KOG0640|consen  328 -------TVKLWEISTGR  338 (430)
T ss_pred             -------eeeeeeecCCc
Confidence                   45666666665

>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.09  E-value=0.0025  Score=69.42  Aligned_cols=117  Identities=15%  Similarity=0.184  Sum_probs=68.6

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC----ccchhHHHHHHHHHHH
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG----TVEIYDQINVTRYLQE  576 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~----~~~~~D~~~~~~~l~~  576 (790)
                      .|++|++-| -+... .......+...++.+.|-.|++...|--|.+ .++......++.    .+.+.|++..++++..
T Consensus        29 gpifl~~gg-E~~~~-~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S-~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~  105 (434)
T PF05577_consen   29 GPIFLYIGG-EGPIE-PFWINNGFMWELAKEFGALVVALEHRYYGKS-QPFGDLSTENLRYLTSEQALADLAYFIRYVKK  105 (434)
T ss_dssp             SEEEEEE---SS-HH-HHHHH-HHHHHHHHHHTEEEEEE--TTSTTB--TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CCccc-hhhhcCChHHHHHHHcCCcEEEeehhhhcCC-CCccccchhhHHhcCHHHHHHHHHHHHHHHHH
Confidence            688888744 33211 1111122455677778999999999964432 222222222221    2457888888888886


Q ss_pred             hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          577 NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      +....+..+++++|.||||.+|+++-.++|. .+.++++.+++..
T Consensus       106 ~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~-~~~ga~ASSapv~  149 (434)
T PF05577_consen  106 KYNTAPNSPWIVFGGSYGGALAAWFRLKYPH-LFDGAWASSAPVQ  149 (434)
T ss_dssp             HTTTGCC--EEEEEETHHHHHHHHHHHH-TT-T-SEEEEET--CC
T ss_pred             hhcCCCCCCEEEECCcchhHHHHHHHhhCCC-eeEEEEeccceee
Confidence            5544556799999999999999999999997 7777776666543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.

>PLN03016 sinapoylglucose-malate O-sinapoyltransferase

Probab=97.06  E-value=0.039  Score=59.17  Aligned_cols=63  Identities=16%  Similarity=0.139  Sum_probs=50.8

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcC--------------------Cc-eEEEEcCCCCCcCCCcchHHHHHHHH
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD--------------------IM-FQSQTYPDEEHGLIGVRPHFYHTLER  783 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g--------------------~~-~~~~~~p~~~H~~~~~~~~~~~~i~~  783 (790)
                      ..++||..|..|.+|+....+.+.+.|.-.+                    .. ..++.+-++||+....++..+..+..
T Consensus       347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~qP~~al~m~~~  426 (433)
T PLN03016        347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR  426 (433)
T ss_pred             CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCCHHHHHHHHHH
Confidence            5799999999999999999999888875211                    11 56677788999995588889999999


Q ss_pred             HHHH
Q psy463          784 FLDS  787 (790)
Q Consensus       784 fl~~  787 (790)
                      |+..
T Consensus       427 Fi~~  430 (433)
T PLN03016        427 WISG  430 (433)
T ss_pred             HHcC
Confidence            9864

>KOG2315|consensus

Probab=97.05  E-value=0.016  Score=60.58  Aligned_cols=152  Identities=16%  Similarity=0.262  Sum_probs=85.6

Q ss_pred             EeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEE
Q psy463          175 LAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNW  254 (790)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~w  254 (790)
                      +.|+..+..+++..+. .-.....-......||+++.++... .    .+|.                  -.+-+..+.|
T Consensus       223 m~WN~~gt~LLvLast-dVDktn~SYYGEq~Lyll~t~g~s~-~----V~L~------------------k~GPVhdv~W  278 (566)
T KOG2315|consen  223 MKWNKLGTALLVLAST-DVDKTNASYYGEQTLYLLATQGESV-S----VPLL------------------KEGPVHDVTW  278 (566)
T ss_pred             EEeccCCceEEEEEEE-eecCCCccccccceEEEEEecCceE-E----EecC------------------CCCCceEEEE
Confidence            5677666654444443 2222222234457899999884322 2    2332                  3456788999


Q ss_pred             ccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEE
Q psy463          255 ANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHL  333 (790)
Q Consensus       255 spDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l  333 (790)
                      +|+|+ ......- . ...+.+.|+.   |..++.-..     ++.....|||-|+.|+ ++..+ +-.|        ++
T Consensus       279 ~~s~~EF~VvyGf-M-PAkvtifnlr---~~~v~df~e-----gpRN~~~fnp~g~ii~-lAGFG-NL~G--------~m  338 (566)
T KOG2315|consen  279 SPSGREFAVVYGF-M-PAKVTIFNLR---GKPVFDFPE-----GPRNTAFFNPHGNIIL-LAGFG-NLPG--------DM  338 (566)
T ss_pred             CCCCCEEEEEEec-c-cceEEEEcCC---CCEeEeCCC-----CCccceEECCCCCEEE-EeecC-CCCC--------ce
Confidence            99999 3332211 1 1125555543   334443321     1245788999999877 45432 1334        68


Q ss_pred             EEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          334 TFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       334 ~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      -++|+...+        .|+.-...-.....|+|||++++-.+..
T Consensus       339 EvwDv~n~K--------~i~~~~a~~tt~~eW~PdGe~flTATTa  375 (566)
T KOG2315|consen  339 EVWDVPNRK--------LIAKFKAANTTVFEWSPDGEYFLTATTA  375 (566)
T ss_pred             EEEeccchh--------hccccccCCceEEEEcCCCcEEEEEecc
Confidence            888987644        3433322223458899999987776655

>KOG0289|consensus

Probab=96.98  E-value=0.5  Score=48.29  Aligned_cols=164  Identities=15%  Similarity=0.154  Sum_probs=93.5

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      +.-+....-.|.|.++.+.+.++.   +...|..+|.+-.....+.  .-.+ +....|.|||--+. +..    .+|  
T Consensus       303 ~~~V~~ls~h~tgeYllsAs~d~~---w~Fsd~~~g~~lt~vs~~~--s~v~-~ts~~fHpDgLifg-tgt----~d~--  369 (506)
T KOG0289|consen  303 EEPVTGLSLHPTGEYLLSASNDGT---WAFSDISSGSQLTVVSDET--SDVE-YTSAAFHPDGLIFG-TGT----PDG--  369 (506)
T ss_pred             cccceeeeeccCCcEEEEecCCce---EEEEEccCCcEEEEEeecc--ccce-eEEeeEcCCceEEe-ccC----CCc--
Confidence            344566778889997666654432   4445666665543333221  1111 45899999996443 333    556  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL  405 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~  405 (790)
                            .|-++|+..+.     .......+...+.. ++|+.+|-+++..++++.     +...|+..- ...+.+... 
T Consensus       370 ------~vkiwdlks~~-----~~a~Fpght~~vk~-i~FsENGY~Lat~add~~-----V~lwDLRKl-~n~kt~~l~-  430 (506)
T KOG0289|consen  370 ------VVKIWDLKSQT-----NVAKFPGHTGPVKA-ISFSENGYWLATAADDGS-----VKLWDLRKL-KNFKTIQLD-  430 (506)
T ss_pred             ------eEEEEEcCCcc-----ccccCCCCCCceeE-EEeccCceEEEEEecCCe-----EEEEEehhh-cccceeecc-
Confidence                  68888987654     13334334445555 889999988888877743     334444220 112222221 


Q ss_pred             cccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          406 LTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       406 ~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                           ....+.+.+|...|++++..  +. -=.||+++-.++..
T Consensus       431 -----~~~~v~s~~fD~SGt~L~~~--g~-~l~Vy~~~k~~k~W  466 (506)
T KOG0289|consen  431 -----EKKEVNSLSFDQSGTYLGIA--GS-DLQVYICKKKTKSW  466 (506)
T ss_pred             -----ccccceeEEEcCCCCeEEee--cc-eeEEEEEecccccc
Confidence                 23367788999999998776  22 23455555444433

>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.97  E-value=0.0015  Score=54.49  Aligned_cols=59  Identities=19%  Similarity=0.277  Sum_probs=52.8

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ..|+|++.++.|+.+|.+.++.+.+.|..+    +++.+++.||.... ...-+.+.+.+||..
T Consensus        34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s----~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~   93 (103)
T PF08386_consen   34 APPILVLGGTHDPVTPYEGARAMAARLPGS----RLVTVDGAGHGVYAGGSPCVDKAVDDYLLD   93 (103)
T ss_pred             CCCEEEEecCcCCCCcHHHHHHHHHHCCCc----eEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence            589999999999999999999999998865    89999999999884 677888899999863

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity

>KOG2919|consensus

Probab=96.97  E-value=0.082  Score=51.65  Aligned_cols=158  Identities=14%  Similarity=0.158  Sum_probs=86.1

Q ss_pred             cCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEE
Q psy463          256 NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTF  335 (790)
Q Consensus       256 pDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~  335 (790)
                      |+..+++.++|.+.   |.++|.-+|+.+.-+..-....-+....+..|||||.+|+ ..-             .+-|.+
T Consensus       121 P~t~l~a~ssr~~P---Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlf-aGy-------------krcirv  183 (406)
T KOG2919|consen  121 PSTNLFAVSSRDQP---IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLF-AGY-------------KRCIRV  183 (406)
T ss_pred             CccceeeeccccCc---eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEe-ecc-------------cceEEE
Confidence            44446666666654   9999999998875543210000001135789999999987 222             235777


Q ss_pred             EEc-CCCCcccCCCcccccCCCeE---EeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCC
Q psy463          336 IDL-DDQAGIKDKVPVPLTRGRFT---VTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQ  411 (790)
Q Consensus       336 ~d~-~~~~~~~~~~~~~lt~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~  411 (790)
                      +|. ..|..+.  ....++++...   +.+-++++|-....+-....+.  ...||.-  .+  ..+-.+-      .+.
T Consensus       184 Fdt~RpGr~c~--vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q--~~giy~~--~~--~~pl~ll------ggh  249 (406)
T KOG2919|consen  184 FDTSRPGRDCP--VYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQ--RVGIYND--DG--RRPLQLL------GGH  249 (406)
T ss_pred             eeccCCCCCCc--chhhhhcccccccceeeeeeccCCCCcceeeecccc--eeeeEec--CC--CCceeee------ccc
Confidence            776 3333111  12234454333   2333678886654443333321  1444432  22  2222222      236


Q ss_pred             cccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          412 KCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       412 ~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .+++....|-+||..+ |+-.+ .-+.|...|++.
T Consensus       250 ~gGvThL~~~edGn~l-fsGaR-k~dkIl~WDiR~  282 (406)
T KOG2919|consen  250 GGGVTHLQWCEDGNKL-FSGAR-KDDKILCWDIRY  282 (406)
T ss_pred             CCCeeeEEeccCcCee-ccccc-CCCeEEEEeehh
Confidence            7788999999999976 33222 256777777754

>KOG0295|consensus

Probab=96.96  E-value=0.16  Score=50.58  Aligned_cols=162  Identities=15%  Similarity=0.221  Sum_probs=97.6

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      +.++.++.+.+-|-|..+....|++.   |...+..+|-|...+...  ..|..   -++.+-||.-++ ..+    .  
T Consensus       191 gh~h~vS~V~f~P~gd~ilS~srD~t---ik~We~~tg~cv~t~~~h--~ewvr---~v~v~~DGti~A-s~s----~--  255 (406)
T KOG0295|consen  191 GHEHGVSSVFFLPLGDHILSCSRDNT---IKAWECDTGYCVKTFPGH--SEWVR---MVRVNQDGTIIA-SCS----N--  255 (406)
T ss_pred             CcccceeeEEEEecCCeeeecccccc---eeEEecccceeEEeccCc--hHhEE---EEEecCCeeEEE-ecC----C--
Confidence            66788899999999997777777654   888899999887666543  44654   678888998665 444    2  


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCC--------------EEEEEEcCCCCceEEEEEE
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKEN--------------NVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~--------------~l~~~~~~~~~~~~~l~~~  389 (790)
                            -.+|.++-+++++     ....|+..+..+.- .+|.|...              .+.+...+.  +..++|  
T Consensus       256 ------dqtl~vW~~~t~~-----~k~~lR~hEh~vEc-i~wap~~~~~~i~~at~~~~~~~~l~s~SrD--ktIk~w--  319 (406)
T KOG0295|consen  256 ------DQTLRVWVVATKQ-----CKAELREHEHPVEC-IAWAPESSYPSISEATGSTNGGQVLGSGSRD--KTIKIW--  319 (406)
T ss_pred             ------CceEEEEEeccch-----hhhhhhccccceEE-EEecccccCcchhhccCCCCCccEEEeeccc--ceEEEE--
Confidence                  2356666666664     12234544444433 55655432              122222211  113333  


Q ss_pred             EcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          390 NIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       390 ~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      ++..  +  .||-.    +.+....+.+++|+|.|+||+-..+..   .+.++|+..+
T Consensus       320 dv~t--g--~cL~t----L~ghdnwVr~~af~p~Gkyi~ScaDDk---tlrvwdl~~~  366 (406)
T KOG0295|consen  320 DVST--G--MCLFT----LVGHDNWVRGVAFSPGGKYILSCADDK---TLRVWDLKNL  366 (406)
T ss_pred             eccC--C--eEEEE----EecccceeeeeEEcCCCeEEEEEecCC---cEEEEEeccc
Confidence            3322  1  34332    344667888999999999985444433   3677777653

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=96.91  E-value=0.43  Score=47.71  Aligned_cols=188  Identities=12%  Similarity=0.078  Sum_probs=106.1

Q ss_pred             EEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          250 SRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       250 ~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      ..+..+|+.. .+++..|....  ++++|..+|+.......+....+   ++.-.|||||+.|| +...+. ..|     
T Consensus         8 H~~a~~p~~~~avafaRRPG~~--~~v~D~~~g~~~~~~~a~~gRHF---yGHg~fs~dG~~Ly-tTEnd~-~~g-----   75 (305)
T PF07433_consen    8 HGVAAHPTRPEAVAFARRPGTF--ALVFDCRTGQLLQRLWAPPGRHF---YGHGVFSPDGRLLY-TTENDY-ETG-----   75 (305)
T ss_pred             cceeeCCCCCeEEEEEeCCCcE--EEEEEcCCCceeeEEcCCCCCEE---ecCEEEcCCCCEEE-Eecccc-CCC-----
Confidence            4577899655 88888887654  78888899887665554432322   56899999999887 443221 223     


Q ss_pred             cccEEEEEEcCCCCcccCCCccc---ccCCCeEEeEEEeeecCCCEEEEEEcC--CCC-----------ceEEEEEEEcC
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVP---LTRGRFTVTEILAWDEKENNVYFLSTQ--GSP-----------IVQHMYRINIA  392 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~---lt~~~~~~~~~~~~s~dg~~l~~~~~~--~~~-----------~~~~l~~~~~~  392 (790)
                       .-.|-++|+..+       .+.   ...+... ...+.|.|||++|++....  -+|           +...|..++..
T Consensus        76 -~G~IgVyd~~~~-------~~ri~E~~s~GIG-PHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~  146 (305)
T PF07433_consen   76 -RGVIGVYDAARG-------YRRIGEFPSHGIG-PHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDAR  146 (305)
T ss_pred             -cEEEEEEECcCC-------cEEEeEecCCCcC-hhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecC
Confidence             457889998732       222   2222211 1236789999888775332  111           22345555544


Q ss_pred             CCCCC-cce--eeecccccCCCcccEEEEEEecCCcEEEEE-eecCC---CCeEEEEecCCCeEEEeccchhHHHhhccC
Q psy463          393 DPTAT-PEC--ITCDLLTSANQKCSYSGATFSTNVSYYVLS-CIGPG---IPEIMLFDKTGQRLLYWDTNEDLRTALTNI  465 (790)
Q Consensus       393 ~~~~~-~~~--lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~-~~~~~---~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~  465 (790)
                      +  |+ .++  |...     ..+-.+.-.++++||..++.. +.+..   +|-+.+.+.. +..+.+...++....+.+|
T Consensus       147 s--G~ll~q~~Lp~~-----~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g-~~~~~~~~p~~~~~~l~~Y  218 (305)
T PF07433_consen  147 S--GALLEQVELPPD-----LHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRG-GALRLLPAPEEQWRRLNGY  218 (305)
T ss_pred             C--CceeeeeecCcc-----ccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCC-CcceeccCChHHHHhhCCc
Confidence            4  33 222  2111     123355667889998754332 33332   5655555433 3355555555555556655


Q ss_pred             C
Q psy463          466 T  466 (790)
Q Consensus       466 ~  466 (790)
                      .
T Consensus       219 ~  219 (305)
T PF07433_consen  219 I  219 (305)
T ss_pred             e
Confidence            3

>KOG0296|consensus

Probab=96.91  E-value=0.058  Score=53.53  Aligned_cols=166  Identities=12%  Similarity=0.090  Sum_probs=99.6

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      .......++.+|+.++++.- .+.+  .-|+.+..+|+.  +....   +..+......||-||..|+ +.    +-+| 
T Consensus        63 H~~svFavsl~P~~~l~aTG-GgDD--~AflW~~~~ge~--~~elt---gHKDSVt~~~FshdgtlLA-TG----dmsG-  128 (399)
T KOG0296|consen   63 HTDSVFAVSLHPNNNLVATG-GGDD--LAFLWDISTGEF--AGELT---GHKDSVTCCSFSHDGTLLA-TG----DMSG-  128 (399)
T ss_pred             cCCceEEEEeCCCCceEEec-CCCc--eEEEEEccCCcc--eeEec---CCCCceEEEEEccCceEEE-ec----CCCc-
Confidence            34557788999966655433 2222  366777777763  22221   1112255789999999777 44    3567 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeec
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCD  404 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~  404 (790)
                             .|.++...++.     ....|- ....-...+.|.|.+..+++-+.+     ..||...+..  +....+.. 
T Consensus       129 -------~v~v~~~stg~-----~~~~~~-~e~~dieWl~WHp~a~illAG~~D-----GsvWmw~ip~--~~~~kv~~-  187 (399)
T KOG0296|consen  129 -------KVLVFKVSTGG-----EQWKLD-QEVEDIEWLKWHPRAHILLAGSTD-----GSVWMWQIPS--QALCKVMS-  187 (399)
T ss_pred             -------cEEEEEcccCc-----eEEEee-cccCceEEEEecccccEEEeecCC-----CcEEEEECCC--cceeeEec-
Confidence                   67777777765     122342 222222348999988866666666     4566666655  22223333 


Q ss_pred             ccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC-eEEEec
Q psy463          405 LLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ-RLLYWD  453 (790)
Q Consensus       405 ~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~  453 (790)
                           +++.......|.|||+.++..++..   .|.+++..++ .+..++
T Consensus       188 -----Gh~~~ct~G~f~pdGKr~~tgy~dg---ti~~Wn~ktg~p~~~~~  229 (399)
T KOG0296|consen  188 -----GHNSPCTCGEFIPDGKRILTGYDDG---TIIVWNPKTGQPLHKIT  229 (399)
T ss_pred             -----CCCCCcccccccCCCceEEEEecCc---eEEEEecCCCceeEEec
Confidence                 2566667788999999998776643   4777777664 334333

>KOG4840|consensus

Probab=96.91  E-value=0.02  Score=52.79  Aligned_cols=109  Identities=17%  Similarity=0.073  Sum_probs=68.5

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC-ChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL-KGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~-~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      -.|||+ ||.+.....-.+. ......+.+.+|.++.+..+.+.. +|..-        ...+++|+..+++++.. .+ 
T Consensus        37 ~~vvfi-GGLgdgLl~~~y~-~~L~~~lde~~wslVq~q~~Ssy~G~Gt~s--------lk~D~edl~~l~~Hi~~-~~-  104 (299)
T KOG4840|consen   37 VKVVFI-GGLGDGLLICLYT-TMLNRYLDENSWSLVQPQLRSSYNGYGTFS--------LKDDVEDLKCLLEHIQL-CG-  104 (299)
T ss_pred             EEEEEE-cccCCCccccccH-HHHHHHHhhccceeeeeecccccccccccc--------ccccHHHHHHHHHHhhc-cC-
Confidence            345565 4444422222222 223344556899999998875432 33221        11567888888886654 23 


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCCCCcc
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~~~~~  623 (790)
                      . ..+|+++|||-|..-.+++++.. .++.+.++|+.+|+++..
T Consensus       105 f-St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE  147 (299)
T KOG4840|consen  105 F-STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE  147 (299)
T ss_pred             c-ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence            2 24899999999999888887432 234677999999999876

>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []

Probab=96.88  E-value=0.0034  Score=60.00  Aligned_cols=90  Identities=12%  Similarity=0.048  Sum_probs=47.6

Q ss_pred             EEEEcCCCCccccccccccchHHHHHhcCCeE---EEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIV---VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~---v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      ||++||..+..  ...|.  .....+.++||.   |++++|-.... ........   .....+.++.+.++.+++   +
T Consensus         4 VVlVHG~~~~~--~~~w~--~~~~~l~~~GY~~~~vya~tyg~~~~-~~~~~~~~---~~~~~~~~l~~fI~~Vl~---~   72 (219)
T PF01674_consen    4 VVLVHGTGGNA--YSNWS--TLAPYLKAAGYCDSEVYALTYGSGNG-SPSVQNAH---MSCESAKQLRAFIDAVLA---Y   72 (219)
T ss_dssp             EEEE--TTTTT--CGGCC--HHHHHHHHTT--CCCEEEE--S-CCH-HTHHHHHH---B-HHHHHHHHHHHHHHHH---H
T ss_pred             EEEECCCCcch--hhCHH--HHHHHHHHcCCCcceeEeccCCCCCC-CCcccccc---cchhhHHHHHHHHHHHHH---h
Confidence            67999987632  33444  333444458999   79999844322 11111110   111234566666777666   3


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALD  605 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~  605 (790)
                      ... ||-|+||||||.++-+++...
T Consensus        73 TGa-kVDIVgHS~G~~iaR~yi~~~   96 (219)
T PF01674_consen   73 TGA-KVDIVGHSMGGTIARYYIKGG   96 (219)
T ss_dssp             HT---EEEEEETCHHHHHHHHHHHC
T ss_pred             hCC-EEEEEEcCCcCHHHHHHHHHc
Confidence            446 999999999999998887643

This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....

>KOG3975|consensus

Probab=96.87  E-value=0.13  Score=48.78  Aligned_cols=58  Identities=9%  Similarity=0.012  Sum_probs=42.7

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL  785 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl  785 (790)
                      .+-+-+..|+.|.-||......+-+.+++.  ++++.+ .+..|.|-- +.+.....+.+.|
T Consensus       242 ~d~l~Fyygt~DgW~p~~~~d~~kdd~~ee--d~~Lde-dki~HAFV~~~~q~ma~~v~d~~  300 (301)
T KOG3975|consen  242 LDSLWFYYGTNDGWVPSHYYDYYKDDVPEE--DLKLDE-DKIPHAFVVKHAQYMANAVFDMI  300 (301)
T ss_pred             CcEEEEEccCCCCCcchHHHHHHhhhcchh--ceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence            578899999999999987777777777665  345555 678898876 6666666665544

>KOG1273|consensus

Probab=96.85  E-value=0.26  Score=48.17  Aligned_cols=157  Identities=10%  Similarity=0.099  Sum_probs=85.7

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ..-.-+..++||+||+.+..++|+.   .|.+.|+..|.+-.-..-.      .+.-...|.|-.+..++...    -..
T Consensus        63 aH~~pi~sl~WS~dgr~LltsS~D~---si~lwDl~~gs~l~rirf~------spv~~~q~hp~k~n~~va~~----~~~  129 (405)
T KOG1273|consen   63 AHVRPITSLCWSRDGRKLLTSSRDW---SIKLWDLLKGSPLKRIRFD------SPVWGAQWHPRKRNKCVATI----MEE  129 (405)
T ss_pred             ccccceeEEEecCCCCEeeeecCCc---eeEEEeccCCCceeEEEcc------CccceeeeccccCCeEEEEE----ecC
Confidence            4455688999999999655555543   3888999888753222111      11224566665444442222    111


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCe-EEeEE---EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF-TVTEI---LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE  399 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~-~~~~~---~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~  399 (790)
                              .-+++++..++      .+.|...+. +....   ..+++.|++|+.-...     ..|..++..+    .+
T Consensus       130 --------sp~vi~~s~~~------h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsK-----Gkllv~~a~t----~e  186 (405)
T KOG1273|consen  130 --------SPVVIDFSDPK------HSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSK-----GKLLVYDAET----LE  186 (405)
T ss_pred             --------CcEEEEecCCc------eeeccCCCccccccccccccccCCCCEEEEecCc-----ceEEEEecch----he
Confidence                    13455554443      444443321 11111   2378889977765555     4566666544    23


Q ss_pred             eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeE
Q psy463          400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEI  439 (790)
Q Consensus       400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i  439 (790)
                      |+..--.+   ....+-+..+|..|+.+++.++.+....+
T Consensus       187 ~vas~rit---s~~~IK~I~~s~~g~~liiNtsDRvIR~y  223 (405)
T KOG1273|consen  187 CVASFRIT---SVQAIKQIIVSRKGRFLIINTSDRVIRTY  223 (405)
T ss_pred             eeeeeeec---hheeeeEEEEeccCcEEEEecCCceEEEE
Confidence            43321111   11245568899999999988777763333

>KOG2931|consensus

Probab=96.84  E-value=0.047  Score=53.02  Aligned_cols=248  Identities=10%  Similarity=0.006  Sum_probs=129.4

Q ss_pred             CCccEEEEEcCCCCcccc--ccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQV--TERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE  576 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~--~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~  576 (790)
                      .++|+++-.|.-+-....  ..-|...-+..+..  .|+|+-+|.+|.-.-..    .....+..-.++++.+.+-.+.+
T Consensus        44 ~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~--~fcv~HV~~PGqe~gAp----~~p~~y~yPsmd~LAd~l~~VL~  117 (326)
T KOG2931|consen   44 GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE--HFCVYHVDAPGQEDGAP----SFPEGYPYPSMDDLADMLPEVLD  117 (326)
T ss_pred             CCCceEEEecccccchHhHhHHhhcCHhHHHHHh--heEEEecCCCccccCCc----cCCCCCCCCCHHHHHHHHHHHHH
Confidence            367889999986543210  01111122233443  39999999998643211    11222223457888888888877


Q ss_pred             hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc-------CCCCccCchhhhhhc
Q psy463          577 NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM-------GLPTFEDNLEGYKIA  649 (790)
Q Consensus       577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~  649 (790)
                      +++   -+.|.-+|--.|+++-..+|..||+ ++-++|++++...-.....+..+++.       |..  .. ...|.  
T Consensus       118 ~f~---lk~vIg~GvGAGAyIL~rFAl~hp~-rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gmt--~~-~~d~l--  188 (326)
T KOG2931|consen  118 HFG---LKSVIGMGVGAGAYILARFALNHPE-RVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGMT--QG-VKDYL--  188 (326)
T ss_pred             hcC---cceEEEecccccHHHHHHHHhcChh-heeEEEEEecCCCCchHHHHHHHHHHHHHHHhhchh--hh-HHHHH--
Confidence            444   5789999999999999999999986 88888888775443221111111111       111  00 00000  


Q ss_pred             cccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHh----cCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCC
Q psy463          650 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQH----ADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRD  725 (790)
Q Consensus       650 ~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  725 (790)
                          ..+.+- +       +...+ ..+-..+..+.+..    .++......|.+..........        ....+ +
T Consensus       189 ----l~H~Fg-~-------e~~~~-~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~--------~~~tl-k  246 (326)
T KOG2931|consen  189 ----LAHHFG-K-------EELGN-NSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPK--------LGTTL-K  246 (326)
T ss_pred             ----HHHHhc-c-------ccccc-cHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCC--------cCccc-c
Confidence                000000 0       00000 00000111111111    1111122222222211111000        01134 7


Q ss_pred             ccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          726 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       726 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ||+|++.|.+-+.+  +.+.++...|..  ....++.+.++|-.+.. .+..+.+.+.-||+-
T Consensus       247 c~vllvvGd~Sp~~--~~vv~~n~~Ldp--~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG  305 (326)
T KOG2931|consen  247 CPVLLVVGDNSPHV--SAVVECNSKLDP--TYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG  305 (326)
T ss_pred             ccEEEEecCCCchh--hhhhhhhcccCc--ccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence            99999999987643  345555555543  24578888999888887 888888999888863

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=96.75  E-value=0.003  Score=41.80  Aligned_cols=32  Identities=9%  Similarity=0.052  Sum_probs=21.0

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccC--cceEEEE
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQ--NRARITR  275 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~--~~~~i~~  275 (790)
                      ........+.|||||+.++++.+..  +..+||+
T Consensus         6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy~   39 (39)
T PF07676_consen    6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIYV   39 (39)
T ss_dssp             -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred             cCCccccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence            5566788999999999555554444  5556664

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>KOG0771|consensus

Probab=96.74  E-value=0.042  Score=55.61  Aligned_cols=65  Identities=11%  Similarity=-0.020  Sum_probs=40.3

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      .....++....|+||++++...-..   .+.++++.+-++..+..+.  ..  .......|+||.+.++ ..+
T Consensus       279 ~~~~siSsl~VS~dGkf~AlGT~dG---sVai~~~~~lq~~~~vk~a--H~--~~VT~ltF~Pdsr~~~-svS  343 (398)
T KOG0771|consen  279 KRFKSISSLAVSDDGKFLALGTMDG---SVAIYDAKSLQRLQYVKEA--HL--GFVTGLTFSPDSRYLA-SVS  343 (398)
T ss_pred             hccCcceeEEEcCCCcEEEEeccCC---cEEEEEeceeeeeEeehhh--he--eeeeeEEEcCCcCccc-ccc
Confidence            3455788999999999666543322   2777766554444333321  11  1245789999999887 444

>KOG2110|consensus

Probab=96.74  E-value=0.17  Score=50.52  Aligned_cols=121  Identities=14%  Similarity=0.204  Sum_probs=76.2

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...+...+.++++-++++-.. .+..+++++|+.+-+.......  ..   +.....+|||||..|+ +++    ..|  
T Consensus       129 ~~gl~AlS~n~~n~ylAyp~s-~t~GdV~l~d~~nl~~v~~I~a--H~---~~lAalafs~~G~llA-TAS----eKG--  195 (391)
T KOG2110|consen  129 PKGLCALSPNNANCYLAYPGS-TTSGDVVLFDTINLQPVNTINA--HK---GPLAALAFSPDGTLLA-TAS----EKG--  195 (391)
T ss_pred             ccceEeeccCCCCceEEecCC-CCCceEEEEEcccceeeeEEEe--cC---CceeEEEECCCCCEEE-Eec----cCc--
Confidence            333445555555557776532 2244588888876544333321  11   1245789999999999 888    345  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe-EEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT-EILAWDEKENNVYFLSTQGSPIVQHMYRINIA  392 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~  392 (790)
                           +-|.++.+..|+     +...+..|..-+. ..++|+||+..|...++.+.   .||++++..
T Consensus       196 -----TVIRVf~v~~G~-----kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeT---VHiFKL~~~  250 (391)
T KOG2110|consen  196 -----TVIRVFSVPEGQ-----KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTET---VHIFKLEKV  250 (391)
T ss_pred             -----eEEEEEEcCCcc-----EeeeeeCCceeeEEEEEEECCCCCeEEEecCCCe---EEEEEeccc
Confidence                 356777777766     3556666654322 23899999998877776655   888887653

>KOG0284|consensus

Probab=96.52  E-value=0.052  Score=54.64  Aligned_cols=159  Identities=14%  Similarity=0.227  Sum_probs=94.8

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ..+.-+..+.||+||.++...+.+.   -|...+.+-...+.+...     -.+.....+|||+..+++ +++    .+|
T Consensus       136 aHDs~Vr~m~ws~~g~wmiSgD~gG---~iKyWqpnmnnVk~~~ah-----h~eaIRdlafSpnDskF~-t~S----dDg  202 (464)
T KOG0284|consen  136 AHDSPVRTMKWSHNGTWMISGDKGG---MIKYWQPNMNNVKIIQAH-----HAEAIRDLAFSPNDSKFL-TCS----DDG  202 (464)
T ss_pred             hhcccceeEEEccCCCEEEEcCCCc---eEEecccchhhhHHhhHh-----hhhhhheeccCCCCceeE-Eec----CCC
Confidence            3455678899999999766555432   133333322222211110     111256899999887777 777    456


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                              .|-++|..-.+     ..++|+.+.|++.. +.|.|... +++.+.+.+    -+-..|..+  +  .||..
T Consensus       203 --------~ikiWdf~~~k-----ee~vL~GHgwdVks-vdWHP~kg-LiasgskDn----lVKlWDprS--g--~cl~t  259 (464)
T KOG0284|consen  203 --------TIKIWDFRMPK-----EERVLRGHGWDVKS-VDWHPTKG-LIASGSKDN----LVKLWDPRS--G--SCLAT  259 (464)
T ss_pred             --------eEEEEeccCCc-----hhheeccCCCCcce-eccCCccc-eeEEccCCc----eeEeecCCC--c--chhhh
Confidence                    46777765443     26778888899887 89999865 555555432    222234433  2  34432


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                          ++.....+-.+.|++++.+++......   .+.++|+.
T Consensus       260 ----lh~HKntVl~~~f~~n~N~Llt~skD~---~~kv~DiR  294 (464)
T KOG0284|consen  260 ----LHGHKNTVLAVKFNPNGNWLLTGSKDQ---SCKVFDIR  294 (464)
T ss_pred             ----hhhccceEEEEEEcCCCCeeEEccCCc---eEEEEehh
Confidence                233555677899999998886653333   46677765

>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.49  E-value=0.021  Score=62.19  Aligned_cols=139  Identities=17%  Similarity=0.107  Sum_probs=78.1

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc--------------cchHHHHHhcCCeEEEEEcCC-C
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS--------------VDWNLYLADNKDIVVAYIDGR-N  543 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~--------------~~~~~~~~~~~G~~v~~~d~r-G  543 (790)
                      .+..+.++.+...+    ..+..|+|+++.||||+..+...+.              ......-.. .-..++.+|.+ |
T Consensus        22 ~~~~lfyw~~~s~~----~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~-~~an~l~iD~PvG   96 (415)
T PF00450_consen   22 ENAHLFYWFFESRN----DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWN-KFANLLFIDQPVG   96 (415)
T ss_dssp             TTEEEEEEEEE-SS----GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GG-GTSEEEEE--STT
T ss_pred             CCcEEEEEEEEeCC----CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccc-cccceEEEeecCc
Confidence            56788888887665    2456799999999999754321111              000111112 24578999955 6


Q ss_pred             CCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHH----hcCC-----CCceEEEE
Q psy463          544 SALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLAL----ALDP-----SNVFKCGI  614 (790)
Q Consensus       544 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a----~~~p-----~~~~~~~v  614 (790)
                      +|.+-..- ......-....++|+..+++.+...++.....++.|+|.||||..+..+|    ....     .-.+++++
T Consensus        97 tGfS~~~~-~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~  175 (415)
T PF00450_consen   97 TGFSYGND-PSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA  175 (415)
T ss_dssp             STT-EESS-GGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred             eEEeeccc-cccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence            55422111 11111111234666666666655557877777999999999998665443    3221     23588999


Q ss_pred             EeCCCCCcc
Q psy463          615 SVAPVTDWI  623 (790)
Q Consensus       615 ~~~~~~~~~  623 (790)
                      ++.|+++..
T Consensus       176 IGng~~dp~  184 (415)
T PF00450_consen  176 IGNGWIDPR  184 (415)
T ss_dssp             EESE-SBHH
T ss_pred             ecCcccccc
Confidence            999998864

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....

>KOG4389|consensus

Probab=96.45  E-value=0.0047  Score=63.82  Aligned_cols=129  Identities=22%  Similarity=0.279  Sum_probs=75.9

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      ++.-++.|. .+  + .+.-++|+++||+.-.. ..+.....-..+++....+|+.++||-.. +|.-+........|..
T Consensus       121 LYlNVW~P~-~~--p-~n~tVlVWiyGGGF~sG-t~SLdvYdGk~la~~envIvVs~NYRvG~-FGFL~l~~~~eaPGNm  194 (601)
T KOG4389|consen  121 LYLNVWAPA-AD--P-YNLTVLVWIYGGGFYSG-TPSLDVYDGKFLAAVENVIVVSMNYRVGA-FGFLYLPGHPEAPGNM  194 (601)
T ss_pred             eEEEEeccC-CC--C-CCceEEEEEEcCccccC-CcceeeeccceeeeeccEEEEEeeeeecc-ceEEecCCCCCCCCcc
Confidence            444556663 11  2 22348999999886432 22222222223444456778999999422 3432221122233444


Q ss_pred             chhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHH-HHHhcCCC--CceEEEEEeCCCC
Q psy463          563 EIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATG-LALALDPS--NVFKCGISVAPVT  620 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~-~~a~~~p~--~~~~~~v~~~~~~  620 (790)
                      .+-|+.-|++|+.++   +| -|+++|.++|.|.|+..+. .++.  |.  ..|+.+|+.+|-.
T Consensus       195 Gl~DQqLAl~WV~~Ni~aFG-Gnp~~vTLFGESAGaASv~aHLls--P~S~glF~raIlQSGS~  255 (601)
T KOG4389|consen  195 GLLDQQLALQWVQENIAAFG-GNPSRVTLFGESAGAASVVAHLLS--PGSRGLFHRAILQSGSL  255 (601)
T ss_pred             chHHHHHHHHHHHHhHHHhC-CCcceEEEeccccchhhhhheecC--CCchhhHHHHHhhcCCC
Confidence            567888889998775   34 6899999999999987543 3333  32  3577777666644

>KOG0278|consensus

Probab=96.39  E-value=0.085  Score=49.61  Aligned_cols=115  Identities=5%  Similarity=0.124  Sum_probs=71.4

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      +....++-.|+||+++..+....    |...|+.+-..-.-+.-+.      ...+.+.+|+- .++ ++.   ..++  
T Consensus       184 ~s~VtSlEvs~dG~ilTia~gss----V~Fwdaksf~~lKs~k~P~------nV~SASL~P~k-~~f-VaG---ged~--  246 (334)
T KOG0278|consen  184 NSPVTSLEVSQDGRILTIAYGSS----VKFWDAKSFGLLKSYKMPC------NVESASLHPKK-EFF-VAG---GEDF--  246 (334)
T ss_pred             CCCCcceeeccCCCEEEEecCce----eEEeccccccceeeccCcc------ccccccccCCC-ceE-Eec---Ccce--
Confidence            34456788999999877765544    7777776643322222111      14578899987 444 444   2444  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccc-cCCCeEEeEEEeeecCCCEEEEEEcC-CCCceEEEEEEEcCC
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPL-TRGRFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMYRINIAD  393 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~l-t~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~  393 (790)
                            .+|.+|-.+|+      .+.. .++......-+.|+|||. +|..+.. |.   ..||.+....
T Consensus       247 ------~~~kfDy~Tge------Ei~~~nkgh~gpVhcVrFSPdGE-~yAsGSEDGT---irlWQt~~~~  300 (334)
T KOG0278|consen  247 ------KVYKFDYNTGE------EIGSYNKGHFGPVHCVRFSPDGE-LYASGSEDGT---IRLWQTTPGK  300 (334)
T ss_pred             ------EEEEEeccCCc------eeeecccCCCCceEEEEECCCCc-eeeccCCCce---EEEEEecCCC
Confidence                  58899998887      3333 344443344489999997 5555444 44   7888876643

>KOG2183|consensus

Probab=96.35  E-value=0.012  Score=59.59  Aligned_cols=97  Identities=20%  Similarity=0.254  Sum_probs=64.2

Q ss_pred             chHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhh---ccCC----ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHH
Q psy463          523 DWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGY---RRLG----TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG  595 (790)
Q Consensus       523 ~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~---~~~~----~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG  595 (790)
                      .++..++.+.+..++.+..|--|. ..+|....+   ...+    .+.+.|.+..+..++.. .......|+++|.||||
T Consensus       101 GFm~D~Ap~~~AllVFaEHRyYGe-S~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~-~~a~~~pvIafGGSYGG  178 (492)
T KOG2183|consen  101 GFMWDLAPELKALLVFAEHRYYGE-SLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRD-LSAEASPVIAFGGSYGG  178 (492)
T ss_pred             chHHhhhHhhCceEEEeehhcccc-CCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhc-cccccCcEEEecCchhh
Confidence            355566777788899999885332 112222211   2222    24577888888888773 33456799999999999


Q ss_pred             HHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          596 YATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       596 ~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      ++++++=.++|.-...++.+.+|+.-
T Consensus       179 MLaAWfRlKYPHiv~GAlAaSAPvl~  204 (492)
T KOG2183|consen  179 MLAAWFRLKYPHIVLGALAASAPVLY  204 (492)
T ss_pred             HHHHHHHhcChhhhhhhhhccCceEe
Confidence            99999999999633445556667643

>KOG0639|consensus

Probab=96.33  E-value=0.065  Score=55.33  Aligned_cols=221  Identities=12%  Similarity=0.158  Sum_probs=123.5

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      ..+|||+.|+.             ||....|-+.||...+.   .++.+||.-.-.+. -++.+++.+  +.|...+.  
T Consensus       472 kL~pdgrtLiv-------------GGeastlsiWDLAapTp---rikaeltssapaCy-ALa~spDak--vcFsccsd--  530 (705)
T KOG0639|consen  472 KLLPDGRTLIV-------------GGEASTLSIWDLAAPTP---RIKAELTSSAPACY-ALAISPDAK--VCFSCCSD--  530 (705)
T ss_pred             EecCCCceEEe-------------ccccceeeeeeccCCCc---chhhhcCCcchhhh-hhhcCCccc--eeeeeccC--
Confidence            56899998885             34456788888876641   34566665432222 345666665  66665531  


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT  274 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~  274 (790)
                               .+|-+.|+.....     .+++.                 ........+..|+||..+ |+..-++  .+.
T Consensus       531 ---------GnI~vwDLhnq~~-----Vrqfq-----------------GhtDGascIdis~dGtkl-WTGGlDn--tvR  576 (705)
T KOG0639|consen  531 ---------GNIAVWDLHNQTL-----VRQFQ-----------------GHTDGASCIDISKDGTKL-WTGGLDN--TVR  576 (705)
T ss_pred             ---------CcEEEEEccccee-----eeccc-----------------CCCCCceeEEecCCCcee-ecCCCcc--cee
Confidence                     4677778776432     23333                 445556778889998733 3322222  244


Q ss_pred             EEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC
Q psy463          275 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR  354 (790)
Q Consensus       275 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~  354 (790)
                      -+|+..+..  +.+.    .+.....+...+|.|.+++ +..    .++        ++++....+.+      ..+|..
T Consensus       577 cWDlregrq--lqqh----dF~SQIfSLg~cP~~dWla-vGM----ens--------~vevlh~skp~------kyqlhl  631 (705)
T KOG0639|consen  577 CWDLREGRQ--LQQH----DFSSQIFSLGYCPTGDWLA-VGM----ENS--------NVEVLHTSKPE------KYQLHL  631 (705)
T ss_pred             ehhhhhhhh--hhhh----hhhhhheecccCCCcccee-eec----ccC--------cEEEEecCCcc------ceeecc
Confidence            445554432  2111    1112244677899999998 454    334        57777766555      667777


Q ss_pred             CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          355 GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       355 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      .+--+.+ +.|++=|++++-++-++-   -..|+......-.+.+           ....+.+-.+|.|.++||..
T Consensus       632 heScVLS-lKFa~cGkwfvStGkDnl---LnawrtPyGasiFqsk-----------E~SsVlsCDIS~ddkyIVTG  692 (705)
T KOG0639|consen  632 HESCVLS-LKFAYCGKWFVSTGKDNL---LNAWRTPYGASIFQSK-----------ESSSVLSCDISFDDKYIVTG  692 (705)
T ss_pred             cccEEEE-EEecccCceeeecCchhh---hhhccCccccceeecc-----------ccCcceeeeeccCceEEEec
Confidence            6654554 788999996554443321   3455544322100110           11233344677888877553

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.26  E-value=0.11  Score=52.94  Aligned_cols=154  Identities=16%  Similarity=0.171  Sum_probs=82.5

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      ..|.|.|+...++|++-..+  +|+.++.++|+.+........      ........+|. |+ .+.     .|      
T Consensus        28 EgP~w~~~~~~L~w~DI~~~--~i~r~~~~~g~~~~~~~p~~~------~~~~~~d~~g~-Lv-~~~-----~g------   86 (307)
T COG3386          28 EGPVWDPDRGALLWVDILGG--RIHRLDPETGKKRVFPSPGGF------SSGALIDAGGR-LI-ACE-----HG------   86 (307)
T ss_pred             cCccCcCCCCEEEEEeCCCC--eEEEecCCcCceEEEECCCCc------ccceeecCCCe-EE-EEc-----cc------
Confidence            35789999998888765432  499999988876654433210      12233344443 43 232     33      


Q ss_pred             ccEEEEEEcCCCCcccCCCc-ccccCCCeE----EeEEEeeecCCCEEEEEEcC-------CCCceEEEEEEEcCCCCCC
Q psy463          330 WDHLTFIDLDDQAGIKDKVP-VPLTRGRFT----VTEILAWDEKENNVYFLSTQ-------GSPIVQHMYRINIADPTAT  397 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~-~~lt~~~~~----~~~~~~~s~dg~~l~~~~~~-------~~~~~~~l~~~~~~~~~~~  397 (790)
                         +++++.+.+.      . +.++.....    ...-...+|||+ ++|....       ..+....||+++..+  ..
T Consensus        87 ---~~~~~~~~~~------~~t~~~~~~~~~~~~r~ND~~v~pdG~-~wfgt~~~~~~~~~~~~~~G~lyr~~p~g--~~  154 (307)
T COG3386          87 ---VRLLDPDTGG------KITLLAEPEDGLPLNRPNDGVVDPDGR-IWFGDMGYFDLGKSEERPTGSLYRVDPDG--GV  154 (307)
T ss_pred             ---cEEEeccCCc------eeEEeccccCCCCcCCCCceeEcCCCC-EEEeCCCccccCccccCCcceEEEEcCCC--CE
Confidence               3445544433      2 222211100    011145678886 6665433       112335799999754  34


Q ss_pred             cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          398 PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       398 ~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      .+.+...       -..-+.+.||||++.++++-+.  ...|+.++++
T Consensus       155 ~~l~~~~-------~~~~NGla~SpDg~tly~aDT~--~~~i~r~~~d  193 (307)
T COG3386         155 VRLLDDD-------LTIPNGLAFSPDGKTLYVADTP--ANRIHRYDLD  193 (307)
T ss_pred             EEeecCc-------EEecCceEECCCCCEEEEEeCC--CCeEEEEecC
Confidence            4433331       2233468999999988776433  2456666554

>KOG2394|consensus

Probab=96.22  E-value=0.034  Score=57.94  Aligned_cols=64  Identities=14%  Similarity=0.126  Sum_probs=39.9

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      ...+.+.++.+||||+.++.++++. .  |.+.+..+.+..-+.     ..+++..--..||||||+|+ +..
T Consensus       288 ~~~g~in~f~FS~DG~~LA~VSqDG-f--LRvF~fdt~eLlg~m-----kSYFGGLLCvcWSPDGKyIv-tGG  351 (636)
T KOG2394|consen  288 IGEGSINEFAFSPDGKYLATVSQDG-F--LRIFDFDTQELLGVM-----KSYFGGLLCVCWSPDGKYIV-TGG  351 (636)
T ss_pred             eccccccceeEcCCCceEEEEecCc-e--EEEeeccHHHHHHHH-----HhhccceEEEEEcCCccEEE-ecC
Confidence            3455678899999999777776653 2  444444444433222     12222233579999999887 555

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=96.18  E-value=0.81  Score=55.48  Aligned_cols=120  Identities=7%  Similarity=0.137  Sum_probs=69.7

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCC-----C------cccccCCceeEccCCCEEEEEEccc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLD-----R------GWFEPFDHLRFSSDGKKMLLILSHN  318 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~-----~------~~~~~~~~~~~spDg~~i~~~~~~~  318 (790)
                      ..+++.++|..+++++...  ..|.++|..++..+.+......     .      ..+.......++|++..+++...  
T Consensus       627 ~GIavd~~gn~LYVaDt~n--~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~--  702 (1057)
T PLN02919        627 QGLAYNAKKNLLYVADTEN--HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMA--  702 (1057)
T ss_pred             cEEEEeCCCCEEEEEeCCC--ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEEC--
Confidence            5678888888666665543  2488888888776655432100     0      00111235789997776764332  


Q ss_pred             cccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC--------C------CeEEeEEEeeecCCCEEEEEEcCCCCceE
Q psy463          319 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR--------G------RFTVTEILAWDEKENNVYFLSTQGSPIVQ  384 (790)
Q Consensus       319 ~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~--------~------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~  384 (790)
                          +      ...|++++..++.      ...+..        +      .......++++|||+.||+.....    .
T Consensus       703 ----~------~~~I~v~d~~~g~------v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n----~  762 (1057)
T PLN02919        703 ----G------QHQIWEYNISDGV------TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSES----S  762 (1057)
T ss_pred             ----C------CCeEEEEECCCCe------EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCC----C
Confidence                3      3478888876654      221110        0      011112278999999888765543    4


Q ss_pred             EEEEEEcCC
Q psy463          385 HMYRINIAD  393 (790)
Q Consensus       385 ~l~~~~~~~  393 (790)
                      .|.++++++
T Consensus       763 ~Irv~D~~t  771 (1057)
T PLN02919        763 SIRALDLKT  771 (1057)
T ss_pred             eEEEEECCC
Confidence            788888765

>KOG0650|consensus

Probab=96.15  E-value=0.22  Score=52.92  Aligned_cols=117  Identities=12%  Similarity=0.214  Sum_probs=74.1

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...+..+.|..+|.+++.+.-.+....+++..+.....+.-+...  .   +..-...|.|--..++ +++         
T Consensus       521 ~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~ks--k---G~vq~v~FHPs~p~lf-VaT---------  585 (733)
T KOG0650|consen  521 PKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKS--K---GLVQRVKFHPSKPYLF-VAT---------  585 (733)
T ss_pred             CCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhc--C---CceeEEEecCCCceEE-EEe---------
Confidence            344668899999997777665555556777777655443222111  1   1133678888877666 444         


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA  392 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~  392 (790)
                          ...|.++|+..++     .++.|..+...+.. ++.+|.|..|+..+.+     ..+..++++
T Consensus       586 ----q~~vRiYdL~kqe-----lvKkL~tg~kwiS~-msihp~GDnli~gs~d-----~k~~WfDld  637 (733)
T KOG0650|consen  586 ----QRSVRIYDLSKQE-----LVKKLLTGSKWISS-MSIHPNGDNLILGSYD-----KKMCWFDLD  637 (733)
T ss_pred             ----ccceEEEehhHHH-----HHHHHhcCCeeeee-eeecCCCCeEEEecCC-----CeeEEEEcc
Confidence                3467888887654     24455555555554 7889999988888777     455555554

>PLN02733 phosphatidylcholine-sterol O-acyltransferase

Probab=96.08  E-value=0.011  Score=63.09  Aligned_cols=85  Identities=8%  Similarity=-0.067  Sum_probs=54.9

Q ss_pred             HHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc
Q psy463          525 NLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL  604 (790)
Q Consensus       525 ~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~  604 (790)
                      ....+++.||.+ ..|.+|.+..   |+...   .....+.++.+.++.+.+..+   ..+|.|+||||||.++..++..
T Consensus       113 li~~L~~~GY~~-~~dL~g~gYD---wR~~~---~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~  182 (440)
T PLN02733        113 MIEQLIKWGYKE-GKTLFGFGYD---FRQSN---RLPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL  182 (440)
T ss_pred             HHHHHHHcCCcc-CCCcccCCCC---ccccc---cHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence            334455689865 7788886642   22210   011235666666766665333   4789999999999999998887


Q ss_pred             CCC---CceEEEEEeCCC
Q psy463          605 DPS---NVFKCGISVAPV  619 (790)
Q Consensus       605 ~p~---~~~~~~v~~~~~  619 (790)
                      +|.   ..++..|++++.
T Consensus       183 ~p~~~~k~I~~~I~la~P  200 (440)
T PLN02733        183 HSDVFEKYVNSWIAIAAP  200 (440)
T ss_pred             CCHhHHhHhccEEEECCC
Confidence            774   235666666654

>KOG0771|consensus

Probab=96.05  E-value=0.089  Score=53.32  Aligned_cols=154  Identities=16%  Similarity=0.117  Sum_probs=81.6

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCcee-EEEEEeCCCcccccCCceeEccCCC--EEEEEEcccccc
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCD-VVFSRDLDRGWFEPFDHLRFSSDGK--KMLLILSHNQES  321 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~-~l~~~~~~~~~~~~~~~~~~spDg~--~i~~~~~~~~~~  321 (790)
                      ....+..+.+||||+.+++..++.    +.+++.++|.+- .++..+  ..|.  +...+|+-|+.  .+...++   ..
T Consensus       185 ~~~eV~DL~FS~dgk~lasig~d~----~~VW~~~~g~~~a~~t~~~--k~~~--~~~cRF~~d~~~~~l~laa~---~~  253 (398)
T KOG0771|consen  185 HHAEVKDLDFSPDGKFLASIGADS----ARVWSVNTGAALARKTPFS--KDEM--FSSCRFSVDNAQETLRLAAS---QF  253 (398)
T ss_pred             hcCccccceeCCCCcEEEEecCCc----eEEEEeccCchhhhcCCcc--cchh--hhhceecccCCCceEEEEEe---cC
Confidence            345577899999999777776653    777788888442 222111  2232  56788988872  2222222   12


Q ss_pred             CCCCCcCcccEEEEEEcCCC-CcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce
Q psy463          322 DGSTPVDSWDHLTFIDLDDQ-AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC  400 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~-~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~  400 (790)
                      ++.     .-.++.+.+-.+ .   -.+.++.+...-.+. .+..|+||+.++..+.+|.   .-||  +..    +.++
T Consensus       254 ~~~-----~v~~~~~~~w~~~~---~l~~~~~~~~~~siS-sl~VS~dGkf~AlGT~dGs---Vai~--~~~----~lq~  315 (398)
T KOG0771|consen  254 PGG-----GVRLCDISLWSGSN---FLRLRKKIKRFKSIS-SLAVSDDGKFLALGTMDGS---VAIY--DAK----SLQR  315 (398)
T ss_pred             CCC-----ceeEEEeeeecccc---ccchhhhhhccCcce-eEEEcCCCcEEEEeccCCc---EEEE--Eec----eeee
Confidence            221     112222222112 1   001233333322334 3889999999988888754   3333  332    2222


Q ss_pred             eeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          401 ITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      +--. .  .-+...+..+.|+||.++++-.
T Consensus       316 ~~~v-k--~aH~~~VT~ltF~Pdsr~~~sv  342 (398)
T KOG0771|consen  316 LQYV-K--EAHLGFVTGLTFSPDSRYLASV  342 (398)
T ss_pred             eEee-h--hhheeeeeeEEEcCCcCccccc
Confidence            2110 0  0134567789999999887553

>KOG0288|consensus

Probab=96.01  E-value=0.11  Score=52.59  Aligned_cols=109  Identities=13%  Similarity=0.156  Sum_probs=70.3

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      .+.++++..|+||.-+....|+.+   +-++|+.+.+.+..+..++-.-- .-.....|||||.+++ ..+    .+|  
T Consensus       341 gg~vtSl~ls~~g~~lLsssRDdt---l~viDlRt~eI~~~~sA~g~k~a-sDwtrvvfSpd~~Yva-AGS----~dg--  409 (459)
T KOG0288|consen  341 GGRVTSLDLSMDGLELLSSSRDDT---LKVIDLRTKEIRQTFSAEGFKCA-SDWTRVVFSPDGSYVA-AGS----ADG--  409 (459)
T ss_pred             CcceeeEeeccCCeEEeeecCCCc---eeeeecccccEEEEeeccccccc-cccceeEECCCCceee-ecc----CCC--
Confidence            456889999999994433355443   88889888877766654321100 0023688999999877 555    566  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCe--EEeEEEeeecCCCEEEEEEc
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF--TVTEILAWDEKENNVYFLST  377 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~--~~~~~~~~s~dg~~l~~~~~  377 (790)
                            .||++++.+++     ....|....-  .+. .++|+|-|+.++-...
T Consensus       410 ------sv~iW~v~tgK-----lE~~l~~s~s~~aI~-s~~W~~sG~~Llsadk  451 (459)
T KOG0288|consen  410 ------SVYIWSVFTGK-----LEKVLSLSTSNAAIT-SLSWNPSGSGLLSADK  451 (459)
T ss_pred             ------cEEEEEccCce-----EEEEeccCCCCcceE-EEEEcCCCchhhcccC
Confidence                  69999999887     2333332211  233 3899999987655443

>KOG2106|consensus

Probab=96.00  E-value=2.5  Score=44.36  Aligned_cols=99  Identities=13%  Similarity=0.101  Sum_probs=56.3

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      ...+.+.|-|-++.-+..+    +.+++|.++.....+-.+ +     ++..-.+|||||..|+ +.+    .++     
T Consensus       410 ~~~~~fhpsg~va~Gt~~G----~w~V~d~e~~~lv~~~~d-~-----~~ls~v~ysp~G~~lA-vgs----~d~-----  469 (626)
T KOG2106|consen  410 AECADFHPSGVVAVGTATG----RWFVLDTETQDLVTIHTD-N-----EQLSVVRYSPDGAFLA-VGS----HDN-----  469 (626)
T ss_pred             eeEeeccCcceEEEeeccc----eEEEEecccceeEEEEec-C-----CceEEEEEcCCCCEEE-Eec----CCC-----
Confidence            4567788888422222222    378888887554444433 1     2345789999999998 566    344     


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEE
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYF  374 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~  374 (790)
                       .--||+++..+.+      ...+..-.......+.||+|++++.-
T Consensus       470 -~iyiy~Vs~~g~~------y~r~~k~~gs~ithLDwS~Ds~~~~~  508 (626)
T KOG2106|consen  470 -HIYIYRVSANGRK------YSRVGKCSGSPITHLDWSSDSQFLVS  508 (626)
T ss_pred             -eEEEEEECCCCcE------EEEeeeecCceeEEeeecCCCceEEe
Confidence             3344555544443      33332211122234899999995443

>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []

Probab=95.99  E-value=0.02  Score=56.29  Aligned_cols=98  Identities=13%  Similarity=0.030  Sum_probs=55.4

Q ss_pred             EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHH-HHHHHHHhCCCc
Q psy463          503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQIN-VTRYLQENLPYI  581 (790)
Q Consensus       503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~~  581 (790)
                      .|+++|++.++..   .|  .-....+....+.|+.++.+|.......          ...++++++ .++.+....+  
T Consensus         2 ~lf~~p~~gG~~~---~y--~~la~~l~~~~~~v~~i~~~~~~~~~~~----------~~si~~la~~y~~~I~~~~~--   64 (229)
T PF00975_consen    2 PLFCFPPAGGSAS---SY--RPLARALPDDVIGVYGIEYPGRGDDEPP----------PDSIEELASRYAEAIRARQP--   64 (229)
T ss_dssp             EEEEESSTTCSGG---GG--HHHHHHHTTTEEEEEEECSTTSCTTSHE----------ESSHHHHHHHHHHHHHHHTS--
T ss_pred             eEEEEcCCccCHH---HH--HHHHHhCCCCeEEEEEEecCCCCCCCCC----------CCCHHHHHHHHHHHhhhhCC--
Confidence            5788999887632   22  2223334322488999999886421111          022344332 2333444233  


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCC--CCceEEEEEeCC
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDP--SNVFKCGISVAP  618 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p--~~~~~~~v~~~~  618 (790)
                       ..++.|+|||+||.+|..+|.+=-  ...+..++++.+
T Consensus        65 -~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~  102 (229)
T PF00975_consen   65 -EGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDS  102 (229)
T ss_dssp             -SSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred             -CCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecC
Confidence             238999999999999988775321  223555666553

Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....

>PRK02888 nitrous-oxide reductase; Validated

Probab=95.88  E-value=0.7  Score=50.87  Aligned_cols=67  Identities=12%  Similarity=0.064  Sum_probs=39.1

Q ss_pred             EEccCCcEEEEEeccCcceEEEEEECCC----C-ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          253 NWANESVVAAWVNRVQNRARITRCSINE----G-TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       253 ~wspDg~~~~~~~r~~~~~~i~~~~~~~----g-~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      .+.+|||..+..     ...+.++|..+    + +....... +..     .....+||||++++ ..+   ..      
T Consensus       283 a~vkdGK~~~V~-----gn~V~VID~~t~~~~~~~v~~yIPV-GKs-----PHGV~vSPDGkyly-Van---kl------  341 (635)
T PRK02888        283 EAVKAGKFKTIG-----GSKVPVVDGRKAANAGSALTRYVPV-PKN-----PHGVNTSPDGKYFI-ANG---KL------  341 (635)
T ss_pred             HhhhCCCEEEEC-----CCEEEEEECCccccCCcceEEEEEC-CCC-----ccceEECCCCCEEE-EeC---CC------
Confidence            356789854442     12488888877    2 22221111 111     34789999999887 444   12      


Q ss_pred             CcccEEEEEEcCCCC
Q psy463          328 DSWDHLTFIDLDDQA  342 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~  342 (790)
                        ...+-++|++..+
T Consensus       342 --S~tVSVIDv~k~k  354 (635)
T PRK02888        342 --SPTVTVIDVRKLD  354 (635)
T ss_pred             --CCcEEEEEChhhh
Confidence              2368888886543

>KOG0264|consensus

Probab=95.85  E-value=0.46  Score=48.76  Aligned_cols=158  Identities=11%  Similarity=0.135  Sum_probs=87.7

Q ss_pred             EEEEEccCCc-EEEEEeccCcceEEEEEECCCCce-------eEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          250 SRVNWANESV-VAAWVNRVQNRARITRCSINEGTC-------DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       250 ~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~-------~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                      ..++|++.-. .+.....++.   +.+.|+.....       +.++..-.     ......+|.|--+.++-.++    .
T Consensus       181 ~glsWn~~~~g~Lls~~~d~~---i~lwdi~~~~~~~~~~~p~~~~~~h~-----~~VeDV~~h~~h~~lF~sv~----d  248 (422)
T KOG0264|consen  181 YGLSWNRQQEGTLLSGSDDHT---ICLWDINAESKEDKVVDPKTIFSGHE-----DVVEDVAWHPLHEDLFGSVG----D  248 (422)
T ss_pred             cccccccccceeEeeccCCCc---EEEEeccccccCCccccceEEeecCC-----cceehhhccccchhhheeec----C
Confidence            3489999887 4333333222   55555543221       22222111     23567899998888775555    3


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCccc-ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC  400 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~-lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~  400 (790)
                      ++        .|.++|+.+++   . ++.. .......+.. ++|+|=+..|+.++...    ..|...++..       
T Consensus       249 d~--------~L~iwD~R~~~---~-~~~~~~~ah~~~vn~-~~fnp~~~~ilAT~S~D----~tV~LwDlRn-------  304 (422)
T KOG0264|consen  249 DG--------KLMIWDTRSNT---S-KPSHSVKAHSAEVNC-VAFNPFNEFILATGSAD----KTVALWDLRN-------  304 (422)
T ss_pred             CC--------eEEEEEcCCCC---C-CCcccccccCCceeE-EEeCCCCCceEEeccCC----CcEEEeechh-------
Confidence            44        68889987421   0 1322 3333444444 78999888776665532    3455555532       


Q ss_pred             eeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      |...+.++.+....+..+.|||....++.+....  ..+.++|+.
T Consensus       305 L~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D--~rl~vWDls  347 (422)
T KOG0264|consen  305 LNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTD--RRLNVWDLS  347 (422)
T ss_pred             cccCceeccCCCcceEEEEeCCCCCceeEecccC--CcEEEEecc
Confidence            1111222334667888999999988876664422  345555554

>KOG0306|consensus

Probab=95.80  E-value=0.93  Score=49.80  Aligned_cols=153  Identities=8%  Similarity=0.091  Sum_probs=91.8

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ..-+..+.+|.|..+++....++    |.+.+..+.+|.+-....    +   .-.-.|-|.++.|+ +..    +.|  
T Consensus       373 R~dVRsl~vS~d~~~~~Sga~~S----ikiWn~~t~kciRTi~~~----y---~l~~~Fvpgd~~Iv-~G~----k~G--  434 (888)
T KOG0306|consen  373 RSDVRSLCVSSDSILLASGAGES----IKIWNRDTLKCIRTITCG----Y---ILASKFVPGDRYIV-LGT----KNG--  434 (888)
T ss_pred             hhheeEEEeecCceeeeecCCCc----EEEEEccCcceeEEeccc----c---EEEEEecCCCceEE-Eec----cCC--
Confidence            34467888998888666554443    888888888775443321    1   23567888888776 554    667  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc---CCCCCCcceee
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI---ADPTATPECIT  402 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~---~~~~~~~~~lt  402 (790)
                            +|-++|+.+..     ....+..++. ..+.++.+||++..+-.+.+..   ..+|...+   ..+ .+.+.|+
T Consensus       435 ------el~vfdlaS~~-----l~Eti~AHdg-aIWsi~~~pD~~g~vT~saDkt---VkfWdf~l~~~~~g-t~~k~ls  498 (888)
T KOG0306|consen  435 ------ELQVFDLASAS-----LVETIRAHDG-AIWSISLSPDNKGFVTGSADKT---VKFWDFKLVVSVPG-TQKKVLS  498 (888)
T ss_pred             ------ceEEEEeehhh-----hhhhhhcccc-ceeeeeecCCCCceEEecCCcE---EEEEeEEEEeccCc-ccceeee
Confidence                  78888988765     1233333333 2344778899997766666533   44554332   111 1222222


Q ss_pred             ec---ccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463          403 CD---LLTSANQKCSYSGATFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       403 ~~---~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~  435 (790)
                      -.   .+.   -...+..+++||||++++.+--..+
T Consensus       499 l~~~rtLe---l~ddvL~v~~Spdgk~LaVsLLdnT  531 (888)
T KOG0306|consen  499 LKHTRTLE---LEDDVLCVSVSPDGKLLAVSLLDNT  531 (888)
T ss_pred             eccceEEe---ccccEEEEEEcCCCcEEEEEeccCe
Confidence            10   011   1235667899999999999866555

>KOG0643|consensus

Probab=95.76  E-value=2  Score=41.28  Aligned_cols=163  Identities=11%  Similarity=0.087  Sum_probs=93.5

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEcc----CCCEEEEEEcccc
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS----DGKKMLLILSHNQ  319 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~sp----Dg~~i~~~~~~~~  319 (790)
                      ..+..++.+.+..||.+++....++..+-.|..+   |+  +|-.-.+       .....|+.    |.+.++ +.+   
T Consensus         8 GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~n---Ge--rlGty~G-------HtGavW~~Did~~s~~li-TGS---   71 (327)
T KOG0643|consen    8 GHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLN---GE--RLGTYDG-------HTGAVWCCDIDWDSKHLI-TGS---   71 (327)
T ss_pred             cCccccceEEecCCCcEEEEecCCCCceEEEecC---Cc--eeeeecC-------CCceEEEEEecCCcceee-ecc---
Confidence            4455667888999999888777765544333322   32  1211122       22444543    455554 444   


Q ss_pred             ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC--CCCceEEEEEEEcCCC--C
Q psy463          320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADP--T  395 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~~~~l~~~~~~~~--~  395 (790)
                       .+        ..+.++|+++|+     ....+.. ...+.. ..|+++|..+.+....  +.+....++.+..+..  .
T Consensus        72 -AD--------~t~kLWDv~tGk-----~la~~k~-~~~Vk~-~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~  135 (327)
T KOG0643|consen   72 -AD--------QTAKLWDVETGK-----QLATWKT-NSPVKR-VDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDID  135 (327)
T ss_pred             -cc--------ceeEEEEcCCCc-----EEEEeec-CCeeEE-EeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhc
Confidence             22        246788999887     1222322 223444 7899999988888776  5554455665543221  0


Q ss_pred             -CC-cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463          396 -AT-PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       396 -~~-~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                       .+ ...|.+       ....+..+.|+|-+++|+..   .....|-.+|+.+++
T Consensus       136 s~ep~~kI~t-------~~skit~a~Wg~l~~~ii~G---he~G~is~~da~~g~  180 (327)
T KOG0643|consen  136 SEEPYLKIPT-------PDSKITSALWGPLGETIIAG---HEDGSISIYDARTGK  180 (327)
T ss_pred             ccCceEEecC-------CccceeeeeecccCCEEEEe---cCCCcEEEEEcccCc
Confidence             12 112222       34567778899999988664   334567888887653

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.62  E-value=0.99  Score=43.83  Aligned_cols=189  Identities=13%  Similarity=0.150  Sum_probs=102.8

Q ss_pred             EEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          251 RVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       251 ~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      .++++|--+ .+++..|..+.  .++.|.++.+.-.+........+   ++.-.|||||..||-+-+   +-+.     .
T Consensus        72 gi~~~p~~~ravafARrPGtf--~~vfD~~~~~~pv~~~s~~~RHf---yGHGvfs~dG~~LYATEn---dfd~-----~  138 (366)
T COG3490          72 GIAFHPALPRAVAFARRPGTF--AMVFDPNGAQEPVTLVSQEGRHF---YGHGVFSPDGRLLYATEN---DFDP-----N  138 (366)
T ss_pred             CeecCCCCcceEEEEecCCce--EEEECCCCCcCcEEEecccCcee---ecccccCCCCcEEEeecC---CCCC-----C
Confidence            467788877 77777776544  67778877655444333333333   557899999998874332   2222     1


Q ss_pred             ccEEEEEEcCCCCcccCCCccccc---CCCeEEeEEEeeecCCCEEEEEEcC--CC-----------CceEEEEEEEcCC
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLT---RGRFTVTEILAWDEKENNVYFLSTQ--GS-----------PIVQHMYRINIAD  393 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt---~~~~~~~~~~~~s~dg~~l~~~~~~--~~-----------~~~~~l~~~~~~~  393 (790)
                      .--|-++|...+       ...+.   ..... .....|.+||+.++.....  -+           .++..|..++...
T Consensus       139 rGViGvYd~r~~-------fqrvgE~~t~GiG-pHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~at  210 (366)
T COG3490         139 RGVIGVYDAREG-------FQRVGEFSTHGIG-PHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAAT  210 (366)
T ss_pred             CceEEEEecccc-------cceecccccCCcC-cceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccc
Confidence            446778887633       22221   11111 1236799999988776442  11           1233455555333


Q ss_pred             CCCC-cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC----CCeEEEEecCCCeEEEeccchhHHHhhccCC
Q psy463          394 PTAT-PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG----IPEIMLFDKTGQRLLYWDTNEDLRTALTNIT  466 (790)
Q Consensus       394 ~~~~-~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~  466 (790)
                        |. .+..+-.   ..-..-.+.-+...+||+.+ |.|.-.+    .|-+.-....++.+..+..-++....+..|.
T Consensus       211 --G~liekh~Lp---~~l~~lSiRHld~g~dgtvw-fgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYi  282 (366)
T COG3490         211 --GNLIEKHTLP---ASLRQLSIRHLDIGRDGTVW-FGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYI  282 (366)
T ss_pred             --cchhhhccCc---hhhhhcceeeeeeCCCCcEE-EEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhh
Confidence              22 1111110   00022344456778888744 5554333    4556555666677777766666666666653

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=95.61  E-value=1.4  Score=47.01  Aligned_cols=164  Identities=12%  Similarity=0.096  Sum_probs=99.3

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      -..+.++|||+.++.++.......+.++|..++........ +..     ....+++|||+.++....    .       
T Consensus       118 P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~v-G~~-----P~~~a~~p~g~~vyv~~~----~-------  180 (381)
T COG3391         118 PVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPV-GNT-----PTGVAVDPDGNKVYVTNS----D-------  180 (381)
T ss_pred             CceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEec-CCC-----cceEEECCCCCeEEEEec----C-------
Confidence            35688999999666665532344589999888766544222 111     247899999998884332    2       


Q ss_pred             cccEEEEEEcCCCCcccCCCccc------ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVP------LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~------lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                       ...|.++|..+..      ..+      +..+.  ......+++||+.+|..-....  ...+.+++...  +......
T Consensus       181 -~~~v~vi~~~~~~------v~~~~~~~~~~~~~--~P~~i~v~~~g~~~yV~~~~~~--~~~v~~id~~~--~~v~~~~  247 (381)
T COG3391         181 -DNTVSVIDTSGNS------VVRGSVGSLVGVGT--GPAGIAVDPDGNRVYVANDGSG--SNNVLKIDTAT--GNVTATD  247 (381)
T ss_pred             -CCeEEEEeCCCcc------eeccccccccccCC--CCceEEECCCCCEEEEEeccCC--CceEEEEeCCC--ceEEEec
Confidence             2378899976654      222      11111  1223678999998887765521  25788888766  3332221


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      -.    .+.. .-.....+|+|++++.....  ...+.++|..+..+
T Consensus       248 ~~----~~~~-~~~~v~~~p~g~~~yv~~~~--~~~V~vid~~~~~v  287 (381)
T COG3391         248 LP----VGSG-APRGVAVDPAGKAAYVANSQ--GGTVSVIDGATDRV  287 (381)
T ss_pred             cc----cccC-CCCceeECCCCCEEEEEecC--CCeEEEEeCCCCce
Confidence            10    0011 33457899999988666444  45688888776443

>KOG1524|consensus

Probab=95.61  E-value=0.25  Score=51.69  Aligned_cols=144  Identities=13%  Similarity=0.219  Sum_probs=79.4

Q ss_pred             CCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          245 VEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       245 ~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ..+-+....|+|||. ++..-..+.    |.+.. .+|-.+......+     ......+|.||...++|...      +
T Consensus       103 H~~A~~~gRW~~dGtgLlt~GEDG~----iKiWS-rsGMLRStl~Q~~-----~~v~c~~W~p~S~~vl~c~g------~  166 (737)
T KOG1524|consen  103 HAAAISSGRWSPDGAGLLTAGEDGV----IKIWS-RSGMLRSTVVQNE-----ESIRCARWAPNSNSIVFCQG------G  166 (737)
T ss_pred             hhhhhhhcccCCCCceeeeecCCce----EEEEe-ccchHHHHHhhcC-----ceeEEEEECCCCCceEEecC------C
Confidence            334456778999999 554433332    44444 3444332221111     12457999999999986443      3


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                              |+++-.+..+.     ++.+...++.-+.. ..|++.+..| .++...  ....+|  +.-+     ..|..
T Consensus       167 --------h~~IKpL~~n~-----k~i~WkAHDGiiL~-~~W~~~s~lI-~sgGED--~kfKvW--D~~G-----~~Lf~  222 (737)
T KOG1524|consen  167 --------HISIKPLAANS-----KIIRWRAHDGLVLS-LSWSTQSNII-ASGGED--FRFKIW--DAQG-----ANLFT  222 (737)
T ss_pred             --------eEEEeeccccc-----ceeEEeccCcEEEE-eecCccccce-eecCCc--eeEEee--cccC-----ccccc
Confidence                    78888876553     25555555544444 7899987744 333221  113333  2222     12221


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      +    .-....+.+++|.||..+++-+++
T Consensus       223 S----~~~ey~ITSva~npd~~~~v~S~n  247 (737)
T KOG1524|consen  223 S----AAEEYAITSVAFNPEKDYLLWSYN  247 (737)
T ss_pred             C----Chhccceeeeeeccccceeeeeee
Confidence            1    114556778889998666665543

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=95.56  E-value=0.22  Score=58.96  Aligned_cols=68  Identities=16%  Similarity=0.113  Sum_probs=42.9

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      +....++|-|.|.+++.+.|..+..+|.....++-+-....-.....  ........||+|+.-|++...
T Consensus       257 gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~--~~~v~~l~Wn~ds~iLAv~~~  324 (928)
T PF04762_consen  257 GLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPE--EEKVIELAWNSDSEILAVWLE  324 (928)
T ss_pred             CccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCC--CceeeEEEECCCCCEEEEEec
Confidence            33457889999998888877666677777776653332222110000  011357999999999886543

>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like

Probab=95.53  E-value=0.045  Score=53.51  Aligned_cols=96  Identities=19%  Similarity=0.063  Sum_probs=52.8

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCe--EEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI--VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE  576 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~--~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~  576 (790)
                      ....++|++||......  +  ...-..++....++  .++.+..+..+.. ..+.  ....-.......+...++.+..
T Consensus        16 ~~~~vlvfVHGyn~~f~--~--a~~r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~--~d~~~a~~s~~~l~~~L~~L~~   88 (233)
T PF05990_consen   16 PDKEVLVFVHGYNNSFE--D--ALRRAAQLAHDLGFPGVVILFSWPSDGSL-LGYF--YDRESARFSGPALARFLRDLAR   88 (233)
T ss_pred             CCCeEEEEEeCCCCCHH--H--HHHHHHHHHHHhCCCceEEEEEcCCCCCh-hhhh--hhhhhHHHHHHHHHHHHHHHHh
Confidence            34579999999866521  1  11122233333333  6888887754431 1111  1111111234444555555554


Q ss_pred             hCCCcCCCceEEEEechHHHHHHHHHhc
Q psy463          577 NLPYIDKTRTAIWGWSYGGYATGLALAL  604 (790)
Q Consensus       577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~  604 (790)
                       .  ....+|.|++||||+.+.+.++..
T Consensus        89 -~--~~~~~I~ilaHSMG~rv~~~aL~~  113 (233)
T PF05990_consen   89 -A--PGIKRIHILAHSMGNRVLLEALRQ  113 (233)
T ss_pred             -c--cCCceEEEEEeCchHHHHHHHHHH
Confidence             2  235799999999999998876543

>KOG0306|consensus

Probab=95.51  E-value=5.2  Score=44.33  Aligned_cols=159  Identities=14%  Similarity=0.140  Sum_probs=85.4

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCc-ceEEEEEECCCCceeEEEEEeCCCc--ccccCCceeEccCCCEEEEEEcccc
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQN-RARITRCSINEGTCDVVFSRDLDRG--WFEPFDHLRFSSDGKKMLLILSHNQ  319 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~-~~~i~~~~~~~g~~~~l~~~~~~~~--~~~~~~~~~~spDg~~i~~~~~~~~  319 (790)
                      ..++-+..++-+|||+ .+.-.....- ....-.+....|..+++.....++.  ..+..-...+||||+.+++..-   
T Consensus       452 AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLL---  528 (888)
T KOG0306|consen  452 AHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLL---  528 (888)
T ss_pred             ccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEec---
Confidence            5577788999999999 5443322211 1122222223343322111100000  0011446899999999985443   


Q ss_pred             ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463          320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE  399 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~  399 (790)
                        +.      .-++|.+|  +=+     ..-.|-.+...+.. ...|||++.++-.+.+.+   ..+|-.+...      
T Consensus       529 --dn------TVkVyflD--tlK-----FflsLYGHkLPV~s-mDIS~DSklivTgSADKn---VKiWGLdFGD------  583 (888)
T KOG0306|consen  529 --DN------TVKVYFLD--TLK-----FFLSLYGHKLPVLS-MDISPDSKLIVTGSADKN---VKIWGLDFGD------  583 (888)
T ss_pred             --cC------eEEEEEec--cee-----eeeeecccccceeE-EeccCCcCeEEeccCCCc---eEEeccccch------
Confidence              23      44677776  222     01223344455555 678999997777666644   7788777643      


Q ss_pred             eeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463          400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~  435 (790)
                      |.-. +   ..++..+-++.|-|+ .++.|++...+
T Consensus       584 CHKS-~---fAHdDSvm~V~F~P~-~~~FFt~gKD~  614 (888)
T KOG0306|consen  584 CHKS-F---FAHDDSVMSVQFLPK-THLFFTCGKDG  614 (888)
T ss_pred             hhhh-h---hcccCceeEEEEccc-ceeEEEecCcc
Confidence            2211 0   113445667888884 45657665443

>KOG0643|consensus

Probab=95.50  E-value=0.94  Score=43.43  Aligned_cols=135  Identities=10%  Similarity=0.151  Sum_probs=76.4

Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCC--cccCCCcc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA--GIKDKVPV  350 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~--~~~~~~~~  350 (790)
                      +.+.|+++|++........      +.....||++|..+++..-   +.-|.     ...|.++|+....  ...+.+..
T Consensus        76 ~kLWDv~tGk~la~~k~~~------~Vk~~~F~~~gn~~l~~tD---~~mg~-----~~~v~~fdi~~~~~~~~s~ep~~  141 (327)
T KOG0643|consen   76 AKLWDVETGKQLATWKTNS------PVKRVDFSFGGNLILASTD---KQMGY-----TCFVSVFDIRDDSSDIDSEEPYL  141 (327)
T ss_pred             eEEEEcCCCcEEEEeecCC------eeEEEeeccCCcEEEEEeh---hhcCc-----ceEEEEEEccCChhhhcccCceE
Confidence            7888999998776655432      2456889999998875544   34452     3456677765211  00111122


Q ss_pred             cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          351 PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       351 ~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      .|...+-.+.. ..|+|-++.|+.--..     ..|-.+++..  ++...-+.     ......+....+|+|..+++..
T Consensus       142 kI~t~~skit~-a~Wg~l~~~ii~Ghe~-----G~is~~da~~--g~~~v~s~-----~~h~~~Ind~q~s~d~T~FiT~  208 (327)
T KOG0643|consen  142 KIPTPDSKITS-ALWGPLGETIIAGHED-----GSISIYDART--GKELVDSD-----EEHSSKINDLQFSRDRTYFITG  208 (327)
T ss_pred             EecCCccceee-eeecccCCEEEEecCC-----CcEEEEEccc--Cceeeech-----hhhccccccccccCCcceEEec
Confidence            33332222333 6799999988765444     3455556554  32111110     0133467789999999987665


Q ss_pred             eecC
Q psy463          431 CIGP  434 (790)
Q Consensus       431 ~~~~  434 (790)
                      +...
T Consensus       209 s~Dt  212 (327)
T KOG0643|consen  209 SKDT  212 (327)
T ss_pred             ccCc
Confidence            4433

>KOG2106|consensus

Probab=95.43  E-value=4.2  Score=42.78  Aligned_cols=98  Identities=12%  Similarity=0.229  Sum_probs=61.7

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      .....|.|-| .++ +..    ..|        +.+++|.++..      ...+-... +......++|||..++..+.+
T Consensus       410 ~~~~~fhpsg-~va-~Gt----~~G--------~w~V~d~e~~~------lv~~~~d~-~~ls~v~ysp~G~~lAvgs~d  468 (626)
T KOG2106|consen  410 AECADFHPSG-VVA-VGT----ATG--------RWFVLDTETQD------LVTIHTDN-EQLSVVRYSPDGAFLAVGSHD  468 (626)
T ss_pred             eeEeeccCcc-eEE-Eee----ccc--------eEEEEecccce------eEEEEecC-CceEEEEEcCCCCEEEEecCC
Confidence            4478899999 565 444    456        67889987755      33333222 223447899999999988877


Q ss_pred             CCCceEEEEEEEcCCCCCCcceee-ecccccCCCcccEEEEEEecCCcEEEE
Q psy463          379 GSPIVQHMYRINIADPTATPECIT-CDLLTSANQKCSYSGATFSTNVSYYVL  429 (790)
Q Consensus       379 ~~~~~~~l~~~~~~~~~~~~~~lt-~~~~~~~~~~~~~~~~~~s~dg~~~~~  429 (790)
                      +.   .-||+++.++  .+..++- |.      + ..+.-..||+|+++++-
T Consensus       469 ~~---iyiy~Vs~~g--~~y~r~~k~~------g-s~ithLDwS~Ds~~~~~  508 (626)
T KOG2106|consen  469 NH---IYIYRVSANG--RKYSRVGKCS------G-SPITHLDWSSDSQFLVS  508 (626)
T ss_pred             Ce---EEEEEECCCC--cEEEEeeeec------C-ceeEEeeecCCCceEEe
Confidence            43   5566666555  3332221 11      2 34556789999998744

>KOG2182|consensus

Probab=95.39  E-value=0.086  Score=55.32  Aligned_cols=116  Identities=11%  Similarity=0.115  Sum_probs=74.7

Q ss_pred             CCccEEEEEcCCCCcccccccccc---chHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc----CCccchhHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSV---DWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR----LGTVEIYDQINVT  571 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~---~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~----~~~~~~~D~~~~~  571 (790)
                      ..-|+.+++-|.+..   .+.|..   .....++++.|-.|+..+.|=-|.+ .+.......+    --.+.++|++..+
T Consensus        84 ~~gPiFLmIGGEgp~---~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S-~P~~~~st~nlk~LSs~QALaDla~fI  159 (514)
T KOG2182|consen   84 PGGPIFLMIGGEGPE---SDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQS-SPIGDLSTSNLKYLSSLQALADLAEFI  159 (514)
T ss_pred             CCCceEEEEcCCCCC---CCCccccCcchHHHHHHHhCCeeEEeeeeccccC-CCCCCCcccchhhhhHHHHHHHHHHHH
Confidence            345888888663332   233422   2334556678999999999853321 1111100000    0125688999999


Q ss_pred             HHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          572 RYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       572 ~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      +.+..+.+.-+..+++.+|.||-|.+++++=..+|+ .+.+.++.++.
T Consensus       160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe-l~~GsvASSap  206 (514)
T KOG2182|consen  160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE-LTVGSVASSAP  206 (514)
T ss_pred             HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch-hheeecccccc
Confidence            988876666666799999999999999999999997 55555555544

>KOG0264|consensus

Probab=95.38  E-value=2.2  Score=43.98  Aligned_cols=166  Identities=14%  Similarity=0.155  Sum_probs=95.2

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCC--ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccc
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEG--TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQE  320 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~  320 (790)
                      .....+..++|.|--+ ++..+..++   .+.++|+.++  +++.....     ........+|+|=+..|+.+++    
T Consensus       225 ~h~~~VeDV~~h~~h~~lF~sv~dd~---~L~iwD~R~~~~~~~~~~~a-----h~~~vn~~~fnp~~~~ilAT~S----  292 (422)
T KOG0264|consen  225 GHEDVVEDVAWHPLHEDLFGSVGDDG---KLMIWDTRSNTSKPSHSVKA-----HSAEVNCVAFNPFNEFILATGS----  292 (422)
T ss_pred             cCCcceehhhccccchhhheeecCCC---eEEEEEcCCCCCCCcccccc-----cCCceeEEEeCCCCCceEEecc----
Confidence            3455567888988777 444443332   3888888853  22211111     0012457899998887765555    


Q ss_pred             cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCC------
Q psy463          321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADP------  394 (790)
Q Consensus       321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~------  394 (790)
                      .++        .|.++|+..=.    .++..+......+.. +.|||....|+.++...+  ...+|.++-.+.      
T Consensus       293 ~D~--------tV~LwDlRnL~----~~lh~~e~H~dev~~-V~WSPh~etvLASSg~D~--rl~vWDls~ig~eq~~ed  357 (422)
T KOG0264|consen  293 ADK--------TVALWDLRNLN----KPLHTFEGHEDEVFQ-VEWSPHNETVLASSGTDR--RLNVWDLSRIGEEQSPED  357 (422)
T ss_pred             CCC--------cEEEeechhcc----cCceeccCCCcceEE-EEeCCCCCceeEecccCC--cEEEEeccccccccChhh
Confidence            455        68899986532    023445555666665 899999998877765532  145555432221      


Q ss_pred             --CCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEE
Q psy463          395 --TATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIM  440 (790)
Q Consensus       395 --~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~  440 (790)
                        ++.++.|..    =.+....+...+|.|..-+.+.+....+.-+||
T Consensus       358 a~dgppEllF~----HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW  401 (422)
T KOG0264|consen  358 AEDGPPELLFI----HGGHTAKVSDFSWNPNEPWTIASVAEDNILQIW  401 (422)
T ss_pred             hccCCcceeEE----ecCcccccccccCCCCCCeEEEEecCCceEEEe
Confidence              011121111    023445667788999998888876666533333

>KOG3967|consensus

Probab=95.37  E-value=0.11  Score=47.54  Aligned_cols=100  Identities=12%  Similarity=0.074  Sum_probs=59.3

Q ss_pred             CCccEEEEEcCCCCcccccccccc--------------chHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc--cCCcc
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSV--------------DWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR--RLGTV  562 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~--------------~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~--~~~~~  562 (790)
                      .+..++|++||.+-..  ..+|.-              .+..+.. +.||-|+..+.....    .|...-..  .+-..
T Consensus        99 ~~~kLlVLIHGSGvVr--AGQWARrLIIN~~Ld~GTQiPyi~rAv-~~Gygviv~N~N~~~----kfye~k~np~kyirt  171 (297)
T KOG3967|consen   99 NPQKLLVLIHGSGVVR--AGQWARRLIINEDLDSGTQIPYIKRAV-AEGYGVIVLNPNRER----KFYEKKRNPQKYIRT  171 (297)
T ss_pred             CccceEEEEecCceEe--cchHhhhhhhccccccCCcChHHHHHH-HcCCcEEEeCCchhh----hhhhcccCcchhccc
Confidence            3445899999976542  122221              1222233 479988888764221    12211111  11113


Q ss_pred             chhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC
Q psy463          563 EIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN  608 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~  608 (790)
                      .++........++.  + .....|+++.||+||++++.++.+.|.+
T Consensus       172 ~veh~~yvw~~~v~--p-a~~~sv~vvahsyGG~~t~~l~~~f~~d  214 (297)
T KOG3967|consen  172 PVEHAKYVWKNIVL--P-AKAESVFVVAHSYGGSLTLDLVERFPDD  214 (297)
T ss_pred             hHHHHHHHHHHHhc--c-cCcceEEEEEeccCChhHHHHHHhcCCc
Confidence            45565555565553  3 5568899999999999999999998864

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=95.35  E-value=6.6  Score=46.95  Aligned_cols=114  Identities=7%  Similarity=0.005  Sum_probs=60.1

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      ...++|-.||+.+++..-.  ...|     ..+.|.+++-+ |+      ..............++|-|.|..|+-....
T Consensus       212 ~~~ISWRGDG~yFAVss~~--~~~~-----~~R~iRVy~Re-G~------L~stSE~v~gLe~~l~WrPsG~lIA~~q~~  277 (928)
T PF04762_consen  212 RVRISWRGDGEYFAVSSVE--PETG-----SRRVIRVYSRE-GE------LQSTSEPVDGLEGALSWRPSGNLIASSQRL  277 (928)
T ss_pred             ceEEEECCCCcEEEEEEEE--cCCC-----ceeEEEEECCC-ce------EEeccccCCCccCCccCCCCCCEEEEEEEc
Confidence            4467899999988854431  1122     14567777754 33      222111111223458999999977666543


Q ss_pred             CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463          379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG  433 (790)
Q Consensus       379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~  433 (790)
                      .+  ...|..+.-.|   - +.-... +........+....|++|+..++.....
T Consensus       278 ~~--~~~VvFfErNG---L-rhgeF~-l~~~~~~~~v~~l~Wn~ds~iLAv~~~~  325 (928)
T PF04762_consen  278 PD--RHDVVFFERNG---L-RHGEFT-LRFDPEEEKVIELAWNSDSEILAVWLED  325 (928)
T ss_pred             CC--CcEEEEEecCC---c-EeeeEe-cCCCCCCceeeEEEECCCCCEEEEEecC
Confidence            22  13333333222   1 100000 0000134466789999999999987643

>KOG2565|consensus

Probab=95.34  E-value=0.1  Score=52.37  Aligned_cols=113  Identities=19%  Similarity=0.149  Sum_probs=72.0

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHh---------cCCeEEEEEcCCCCCCChh
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD---------NKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~---------~~G~~v~~~d~rG~~~~g~  549 (790)
                      .|.+|+.....|+..+ ...+.+| |+++||.||+.  .+-|..  . .++.         +.-|-|++|..+|-|-+..
T Consensus       132 eGL~iHFlhvk~p~~k-~~k~v~P-lLl~HGwPGsv--~EFykf--I-PlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~  204 (469)
T KOG2565|consen  132 EGLKIHFLHVKPPQKK-KKKKVKP-LLLLHGWPGSV--REFYKF--I-PLLTDPKRHGNESDYAFEVIAPSLPGYGWSDA  204 (469)
T ss_pred             cceeEEEEEecCCccc-cCCcccc-eEEecCCCchH--HHHHhh--h-hhhcCccccCCccceeEEEeccCCCCcccCcC
Confidence            6889999988887543 1233455 56789999983  232221  1 1221         1235599999988443221


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN  608 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~  608 (790)
                      +     . .. +.....++..++-|.-+++   -++..|-|.-+|..++..++..+|++
T Consensus       205 ~-----s-k~-GFn~~a~ArvmrkLMlRLg---~nkffiqGgDwGSiI~snlasLyPen  253 (469)
T KOG2565|consen  205 P-----S-KT-GFNAAATARVMRKLMLRLG---YNKFFIQGGDWGSIIGSNLASLYPEN  253 (469)
T ss_pred             C-----c-cC-CccHHHHHHHHHHHHHHhC---cceeEeecCchHHHHHHHHHhhcchh
Confidence            1     1 11 1334455555665554455   48999999999999999999999974

>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]

Probab=95.31  E-value=0.29  Score=46.62  Aligned_cols=62  Identities=18%  Similarity=0.341  Sum_probs=47.6

Q ss_pred             CccEEEEecCCC------cccchhhhHHHHHHHHhcCCceEEEEcCC--CCCcCCCcchHHHHHHHHHHH
Q psy463          725 DKQYLLVHGTMD------DNVHFQQSMMLAKSLQHADIMFQSQTYPD--EEHGLIGVRPHFYHTLERFLD  786 (790)
Q Consensus       725 ~~P~Lii~G~~D------~~v~~~~~~~l~~~l~~~g~~~~~~~~p~--~~H~~~~~~~~~~~~i~~fl~  786 (790)
                      .+-+|+|.|+.|      -.||...+...+..+...+....-.+|+|  +.|.-......+...+..||-
T Consensus       216 ~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~v~~yv~~FLw  285 (288)
T COG4814         216 NTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPTVAKYVKNFLW  285 (288)
T ss_pred             CcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChhHHHHHHHHhh
Confidence            578999999765      56888899999999988887766656665  567655567778888888874

>KOG4378|consensus

Probab=95.29  E-value=1.1  Score=46.74  Aligned_cols=157  Identities=17%  Similarity=0.235  Sum_probs=96.6

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      +.-+.+--...+++....+.+   |.+..+.++....-+..+..    .......|||--+.+..+++    .+|     
T Consensus       124 vt~v~YN~~DeyiAsvs~gGd---iiih~~~t~~~tt~f~~~sg----qsvRll~ys~skr~lL~~as----d~G-----  187 (673)
T KOG4378|consen  124 VTYVDYNNTDEYIASVSDGGD---IIIHGTKTKQKTTTFTIDSG----QSVRLLRYSPSKRFLLSIAS----DKG-----  187 (673)
T ss_pred             eEEEEecCCcceeEEeccCCc---EEEEecccCccccceecCCC----CeEEEeecccccceeeEeec----cCC-----
Confidence            444444434445555544332   88888888765544433211    11346789999888876666    456     


Q ss_pred             cccEEEEEEcCCCCcccCCCcc--cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPV--PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL  406 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~--~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~  406 (790)
                         .+.++|+.+..      ++  .+..+...-.+ +.++|-...|++.....    .+|+.+++.++ .-..||+-   
T Consensus       188 ---~VtlwDv~g~s------p~~~~~~~HsAP~~g-icfspsne~l~vsVG~D----kki~~yD~~s~-~s~~~l~y---  249 (673)
T KOG4378|consen  188 ---AVTLWDVQGMS------PIFHASEAHSAPCRG-ICFSPSNEALLVSVGYD----KKINIYDIRSQ-ASTDRLTY---  249 (673)
T ss_pred             ---eEEEEeccCCC------cccchhhhccCCcCc-ceecCCccceEEEeccc----ceEEEeecccc-cccceeee---
Confidence               57788887654      22  12223322334 78999887665554332    68888888652 33456664   


Q ss_pred             ccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          407 TSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       407 ~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                           ...++.++|+++|.+++..   ...++|+.+|+.+.
T Consensus       250 -----~~Plstvaf~~~G~~L~aG---~s~G~~i~YD~R~~  282 (673)
T KOG4378|consen  250 -----SHPLSTVAFSECGTYLCAG---NSKGELIAYDMRST  282 (673)
T ss_pred             -----cCCcceeeecCCceEEEee---cCCceEEEEecccC
Confidence                 2356779999999988663   34667999998763

>KOG2110|consensus

Probab=95.28  E-value=0.39  Score=48.08  Aligned_cols=138  Identities=12%  Similarity=0.087  Sum_probs=77.4

Q ss_pred             EEEEECCCCce-eEEEEEeCCCcccccCCceeEccC--CCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463          273 ITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSD--GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  349 (790)
Q Consensus       273 i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spD--g~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~  349 (790)
                      ||++|+.+-+. ..|-..+     ..+.+--++||.  +.+++|=.+   ...|        +++++|+.+=+     ..
T Consensus       108 IyIydI~~MklLhTI~t~~-----~n~~gl~AlS~n~~n~ylAyp~s---~t~G--------dV~l~d~~nl~-----~v  166 (391)
T KOG2110|consen  108 IYIYDIKDMKLLHTIETTP-----PNPKGLCALSPNNANCYLAYPGS---TTSG--------DVVLFDTINLQ-----PV  166 (391)
T ss_pred             EEEEecccceeehhhhccC-----CCccceEeeccCCCCceEEecCC---CCCc--------eEEEEEcccce-----ee
Confidence            99999876543 1121110     011233455554  457775433   2344        78999976533     12


Q ss_pred             ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEE
Q psy463          350 VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVL  429 (790)
Q Consensus       350 ~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~  429 (790)
                      ..|..++..+.. +++++||..|+-.+..|.    -|.++.+..+ .+......+.     -...+++.+||||++++..
T Consensus       167 ~~I~aH~~~lAa-lafs~~G~llATASeKGT----VIRVf~v~~G-~kl~eFRRG~-----~~~~IySL~Fs~ds~~L~~  235 (391)
T KOG2110|consen  167 NTINAHKGPLAA-LAFSPDGTLLATASEKGT----VIRVFSVPEG-QKLYEFRRGT-----YPVSIYSLSFSPDSQFLAA  235 (391)
T ss_pred             eEEEecCCceeE-EEECCCCCEEEEeccCce----EEEEEEcCCc-cEeeeeeCCc-----eeeEEEEEEECCCCCeEEE
Confidence            334455555544 899999998877776653    3444454441 1222222211     2357789999999999877


Q ss_pred             EeecCCCCeEEEEecC
Q psy463          430 SCIGPGIPEIMLFDKT  445 (790)
Q Consensus       430 ~~~~~~~~~i~~~~~~  445 (790)
                      +.+..+   |.++.++
T Consensus       236 sS~TeT---VHiFKL~  248 (391)
T KOG2110|consen  236 SSNTET---VHIFKLE  248 (391)
T ss_pred             ecCCCe---EEEEEec
Confidence            765554   5555443

>KOG0282|consensus

Probab=95.27  E-value=0.098  Score=53.92  Aligned_cols=144  Identities=13%  Similarity=0.122  Sum_probs=88.7

Q ss_pred             CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ...+..+.||++|+ ++...-..    .|.+.|+++|++..-+....      ...-..|.||+..+++...    .++ 
T Consensus       258 ~k~Vrd~~~s~~g~~fLS~sfD~----~lKlwDtETG~~~~~f~~~~------~~~cvkf~pd~~n~fl~G~----sd~-  322 (503)
T KOG0282|consen  258 RKPVRDASFNNCGTSFLSASFDR----FLKLWDTETGQVLSRFHLDK------VPTCVKFHPDNQNIFLVGG----SDK-  322 (503)
T ss_pred             hhhhhhhhccccCCeeeeeecce----eeeeeccccceEEEEEecCC------CceeeecCCCCCcEEEEec----CCC-
Confidence            34467889999999 43333222    28899999999876665432      1446889999977775444    445 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCccc-ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~-lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                             .|..+|..+++      ..+ ...+-..+.. +.|-++|++.+-++.+..   ..+|...+..   ..+.+..
T Consensus       323 -------ki~~wDiRs~k------vvqeYd~hLg~i~~-i~F~~~g~rFissSDdks---~riWe~~~~v---~ik~i~~  382 (503)
T KOG0282|consen  323 -------KIRQWDIRSGK------VVQEYDRHLGAILD-ITFVDEGRRFISSSDDKS---VRIWENRIPV---PIKNIAD  382 (503)
T ss_pred             -------cEEEEeccchH------HHHHHHhhhhheee-eEEccCCceEeeeccCcc---EEEEEcCCCc---cchhhcc
Confidence                   78999998887      322 2222222233 567788987766666644   6777665432   1111111


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEE
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      .      +......+...|.+++++..
T Consensus       383 ~------~~hsmP~~~~~P~~~~~~aQ  403 (503)
T KOG0282|consen  383 P------EMHTMPCLTLHPNGKWFAAQ  403 (503)
T ss_pred             h------hhccCcceecCCCCCeehhh
Confidence            0      23344456788999987553

>KOG4388|consensus

Probab=95.17  E-value=0.031  Score=58.97  Aligned_cols=91  Identities=15%  Similarity=0.057  Sum_probs=63.1

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHh--
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN--  577 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--  577 (790)
                      ..-+|++.|||+.......+-. .+...++.+.|+-|+.+||.-.+.-..+           ...+++..+.-|++.+  
T Consensus       395 S~sli~HcHGGGfVAqsSkSHE-~YLr~Wa~aL~cPiiSVdYSLAPEaPFP-----------RaleEv~fAYcW~inn~a  462 (880)
T KOG4388|consen  395 SRSLIVHCHGGGFVAQSSKSHE-PYLRSWAQALGCPIISVDYSLAPEAPFP-----------RALEEVFFAYCWAINNCA  462 (880)
T ss_pred             CceEEEEecCCceeeecccccc-HHHHHHHHHhCCCeEEeeeccCCCCCCC-----------cHHHHHHHHHHHHhcCHH
Confidence            3458999999987543222222 3445555568999999999876653322           3477888888888764  


Q ss_pred             -CCCcCCCceEEEEechHHHHHHHHHh
Q psy463          578 -LPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       578 -~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                       ++ ...+||++.|-|.||.++.-.+.
T Consensus       463 llG-~TgEriv~aGDSAGgNL~~~VaL  488 (880)
T KOG4388|consen  463 LLG-STGERIVLAGDSAGGNLCFTVAL  488 (880)
T ss_pred             HhC-cccceEEEeccCCCcceeehhHH
Confidence             34 44689999999999998765443

>KOG0639|consensus

Probab=95.05  E-value=0.21  Score=51.83  Aligned_cols=138  Identities=12%  Similarity=0.098  Sum_probs=85.7

Q ss_pred             EEEEEEccCCcEEEE-EeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          249 LSRVNWANESVVAAW-VNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       249 ~~~~~wspDg~~~~~-~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      -..++.|||.|+.+. ...+.    |.++|+-.....+-+..     ..+....+..|+||.+|. +..    .+     
T Consensus       512 CyALa~spDakvcFsccsdGn----I~vwDLhnq~~VrqfqG-----htDGascIdis~dGtklW-TGG----lD-----  572 (705)
T KOG0639|consen  512 CYALAISPDAKVCFSCCSDGN----IAVWDLHNQTLVRQFQG-----HTDGASCIDISKDGTKLW-TGG----LD-----  572 (705)
T ss_pred             hhhhhcCCccceeeeeccCCc----EEEEEcccceeeecccC-----CCCCceeEEecCCCceee-cCC----Cc-----
Confidence            346788999995443 33333    88899877655444432     112256789999999997 443    12     


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEE-eEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV-TEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL  406 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~  406 (790)
                         ..+.-+|+..+.        ++...++.. ...+...|.+.+|++--..     .++++....+  .+.-.|..   
T Consensus       573 ---ntvRcWDlregr--------qlqqhdF~SQIfSLg~cP~~dWlavGMen-----s~vevlh~sk--p~kyqlhl---  631 (705)
T KOG0639|consen  573 ---NTVRCWDLREGR--------QLQQHDFSSQIFSLGYCPTGDWLAVGMEN-----SNVEVLHTSK--PEKYQLHL---  631 (705)
T ss_pred             ---cceeehhhhhhh--------hhhhhhhhhhheecccCCCccceeeeccc-----CcEEEEecCC--ccceeecc---
Confidence               246677876654        444443321 1226788999998876544     4666666654  23334443   


Q ss_pred             ccCCCcccEEEEEEecCCcEEEEE
Q psy463          407 TSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       407 ~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                          ...-+-++.|++.|+|++-+
T Consensus       632 ----heScVLSlKFa~cGkwfvSt  651 (705)
T KOG0639|consen  632 ----HESCVLSLKFAYCGKWFVST  651 (705)
T ss_pred             ----cccEEEEEEecccCceeeec
Confidence                34456678999999997554

>KOG0319|consensus

Probab=95.04  E-value=4.7  Score=44.50  Aligned_cols=329  Identities=14%  Similarity=0.126  Sum_probs=156.4

Q ss_pred             eeecCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCC--cceeEeeeecccce
Q psy463            5 EVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWAN--ESVVAAWVNRVQNR   82 (790)
Q Consensus         5 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~--~~~~~~~~~r~~~~   82 (790)
                      ..++...++.+|+||..+..++. +.-..+|.+...-        ....+.+ |...-.+...+  .+..-.|.-.....
T Consensus       190 ~H~S~vtsL~~~~d~~~~ls~~R-Dkvi~vwd~~~~~--------~l~~lp~-ye~~E~vv~l~~~~~~~~~~~~TaG~~  259 (775)
T KOG0319|consen  190 LHKSAVTSLAFSEDSLELLSVGR-DKVIIVWDLVQYK--------KLKTLPL-YESLESVVRLREELGGKGEYIITAGGS  259 (775)
T ss_pred             hhhhheeeeeeccCCceEEEecc-CcEEEEeehhhhh--------hhheech-hhheeeEEEechhcCCcceEEEEecCC
Confidence            34677789999999999887764 4445555441100        0000000 00110111110  11111222222333


Q ss_pred             eEEEEeeCCCCeeeEEEeecCCCCccccCCcc-ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcc
Q psy463           83 ARITRCSINEGTCDVVFSRDLDRGWFEPFDHL-RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  161 (790)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~  161 (790)
                      -.++.++..+++|..........    ..... ...-+++-++.+.              -++|.++|.++..     +.
T Consensus       260 g~~~~~d~es~~~~~~~~~~~~~----e~~~~~~~~~~~~~l~vta--------------eQnl~l~d~~~l~-----i~  316 (775)
T KOG0319|consen  260 GVVQYWDSESGKCVYKQRQSDSE----EIDHLLAIESMSQLLLVTA--------------EQNLFLYDEDELT-----IV  316 (775)
T ss_pred             ceEEEEecccchhhhhhccCCch----hhhcceeccccCceEEEEc--------------cceEEEEEccccE-----Ee
Confidence            45566777777766543332111    11111 2223334344333              3488899877763     45


Q ss_pred             eeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccC
Q psy463          162 VPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEK  241 (790)
Q Consensus       162 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~  241 (790)
                      .+|-...-++....-+.+..+  .+++..+.           .+|-++++.+...+       |-.              
T Consensus       317 k~ivG~ndEI~Dm~~lG~e~~--~laVATNs-----------~~lr~y~~~~~~c~-------ii~--------------  362 (775)
T KOG0319|consen  317 KQIVGYNDEILDMKFLGPEES--HLAVATNS-----------PELRLYTLPTSYCQ-------IIP--------------  362 (775)
T ss_pred             hhhcCCchhheeeeecCCccc--eEEEEeCC-----------CceEEEecCCCceE-------EEe--------------
Confidence            566655556666666666555  33333321           34555566664421       221              


Q ss_pred             CCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          242 ENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       242 ~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                        +....+.++.-+-+|-+++..+++ +..++|++  +.+.++.+..... ++.-...+....|-.|-.++.+++    .
T Consensus       363 --GH~e~vlSL~~~~~g~llat~sKD-~svilWr~--~~~~~~~~~~a~~-~gH~~svgava~~~~~asffvsvS----~  432 (775)
T KOG0319|consen  363 --GHTEAVLSLDVWSSGDLLATGSKD-KSVILWRL--NNNCSKSLCVAQA-NGHTNSVGAVAGSKLGASFFVSVS----Q  432 (775)
T ss_pred             --CchhheeeeeecccCcEEEEecCC-ceEEEEEe--cCCcchhhhhhhh-cccccccceeeecccCccEEEEec----C
Confidence              233334444433455444444443 33456666  3232222111111 111112446677777777776666    4


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCccccc------CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCC
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT------RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPT  395 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~  395 (790)
                      +.        .|-++++...+...  .+..++      .++-++.. ++.+|+.+.|+-.+.+..   ..||.++ .   
T Consensus       433 D~--------tlK~W~l~~s~~~~--~~~~~~~~~t~~aHdKdIN~-Vaia~ndkLiAT~SqDkt---aKiW~le-~---  494 (775)
T KOG0319|consen  433 DC--------TLKLWDLPKSKETA--FPIVLTCRYTERAHDKDINC-VAIAPNDKLIATGSQDKT---AKIWDLE-Q---  494 (775)
T ss_pred             Cc--------eEEEecCCCccccc--ccceehhhHHHHhhcccccc-eEecCCCceEEecccccc---eeeeccc-C---
Confidence            44        35555554422100  022221      12334444 788998886655555543   6777665 1   


Q ss_pred             CCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463          396 ATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       396 ~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~  435 (790)
                      .+..-+      +.++..++..++||+..+.+ .++++..
T Consensus       495 ~~l~~v------LsGH~RGvw~V~Fs~~dq~l-aT~SgD~  527 (775)
T KOG0319|consen  495 LRLLGV------LSGHTRGVWCVSFSKNDQLL-ATCSGDK  527 (775)
T ss_pred             ceEEEE------eeCCccceEEEEecccccee-EeccCCc
Confidence            111111      22367788899999988755 4555544

>KOG0295|consensus

Probab=94.97  E-value=1.3  Score=44.42  Aligned_cols=135  Identities=10%  Similarity=0.150  Sum_probs=80.3

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|...++++|-..     .+++                 .....+..+....||.+++.-+.++   .+.+..+++++|
T Consensus       215 ~tik~We~~tg~cv-----~t~~-----------------~h~ewvr~v~v~~DGti~As~s~dq---tl~vW~~~t~~~  269 (406)
T KOG0295|consen  215 NTIKAWECDTGYCV-----KTFP-----------------GHSEWVRMVRVNQDGTIIASCSNDQ---TLRVWVVATKQC  269 (406)
T ss_pred             cceeEEecccceeE-----Eecc-----------------CchHhEEEEEecCCeeEEEecCCCc---eEEEEEeccchh
Confidence            46666777777642     3333                 4455788899999999777665544   266666778877


Q ss_pred             eEEEEEeCCCcccccCCceeEcc--------------CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSS--------------DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  349 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~sp--------------Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~  349 (790)
                      +.++.+-..     +..-.+|.|              ||-.+.+..+    +++        .|-.+|+.++.     ..
T Consensus       270 k~~lR~hEh-----~vEci~wap~~~~~~i~~at~~~~~~~~l~s~S----rDk--------tIk~wdv~tg~-----cL  327 (406)
T KOG0295|consen  270 KAELREHEH-----PVECIAWAPESSYPSISEATGSTNGGQVLGSGS----RDK--------TIKIWDVSTGM-----CL  327 (406)
T ss_pred             hhhhhcccc-----ceEEEEecccccCcchhhccCCCCCccEEEeec----ccc--------eEEEEeccCCe-----EE
Confidence            655432110     111223322              3333443444    444        57778888775     23


Q ss_pred             ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463          350 VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       350 ~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~  389 (790)
                      -.|...+-.+.+ .+++|.|++|+-.+.++.   -++|.+
T Consensus       328 ~tL~ghdnwVr~-~af~p~Gkyi~ScaDDkt---lrvwdl  363 (406)
T KOG0295|consen  328 FTLVGHDNWVRG-VAFSPGGKYILSCADDKT---LRVWDL  363 (406)
T ss_pred             EEEecccceeee-eEEcCCCeEEEEEecCCc---EEEEEe
Confidence            334444444565 789999999888887744   556655

>KOG1920|consensus

Probab=94.89  E-value=11  Score=44.54  Aligned_cols=125  Identities=10%  Similarity=0.088  Sum_probs=66.5

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEc
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLST  377 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~  377 (790)
                      ...+.|--||+.+++..-.  ...|      ...|-++|-+ |.      . +.+.. .......++|-|.|..++....
T Consensus       198 ~~~IsWRgDg~~fAVs~~~--~~~~------~RkirV~drE-g~------L-ns~se~~~~l~~~LsWkPsgs~iA~iq~  261 (1265)
T KOG1920|consen  198 KTSISWRGDGEYFAVSFVE--SETG------TRKIRVYDRE-GA------L-NSTSEPVEGLQHSLSWKPSGSLIAAIQC  261 (1265)
T ss_pred             CceEEEccCCcEEEEEEEe--ccCC------ceeEEEeccc-ch------h-hcccCcccccccceeecCCCCeEeeeee
Confidence            3458999999988754321  1233      4678888866 32      1 11111 1122345899998887765544


Q ss_pred             CCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          378 QGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       378 ~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      ..+-  ..|..+.-.|   -..- . ..+..+.+...+..+.|+.++..++..........|.++...+
T Consensus       262 ~~sd--~~IvffErNG---L~hg-~-f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N  323 (1265)
T KOG1920|consen  262 KTSD--SDIVFFERNG---LRHG-E-FVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGN  323 (1265)
T ss_pred             cCCC--CcEEEEecCC---cccc-c-cccCCcccccchheeeecCCCCceeeeecccccceEEEEEecC
Confidence            4221  2344443322   1100 0 0000111233367789999999887765554445566666554

>KOG0278|consensus

Probab=94.87  E-value=2.5  Score=40.16  Aligned_cols=141  Identities=14%  Similarity=0.185  Sum_probs=82.3

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      ...+.+..+.|--..+ ++..+...    .+.+.|..+|...+-..-..      +..+...|+||+.|. ++      .
T Consensus       141 ghtg~Ir~v~wc~eD~~iLSSadd~----tVRLWD~rTgt~v~sL~~~s------~VtSlEvs~dG~ilT-ia------~  203 (334)
T KOG0278|consen  141 GHTGGIRTVLWCHEDKCILSSADDK----TVRLWDHRTGTEVQSLEFNS------PVTSLEVSQDGRILT-IA------Y  203 (334)
T ss_pred             CCCCcceeEEEeccCceEEeeccCC----ceEEEEeccCcEEEEEecCC------CCcceeeccCCCEEE-Ee------c
Confidence            6677888899988777 54443322    27788888886654333221      256889999999665 22      2


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                      |       .-|..+|+.+=+     ..+.. +-...+.. .+.+|+.. +++.+.. .   ..+|+++..+  ++..-..
T Consensus       204 g-------ssV~Fwdaksf~-----~lKs~-k~P~nV~S-ASL~P~k~-~fVaGge-d---~~~~kfDy~T--geEi~~~  262 (334)
T KOG0278|consen  204 G-------SSVKFWDAKSFG-----LLKSY-KMPCNVES-ASLHPKKE-FFVAGGE-D---FKVYKFDYNT--GEEIGSY  262 (334)
T ss_pred             C-------ceeEEecccccc-----ceeec-cCcccccc-ccccCCCc-eEEecCc-c---eEEEEEeccC--Cceeeec
Confidence            3       136667765422     01111 11223333 56788864 4444333 2   6888888877  4332221


Q ss_pred             ecccccCCCcccEEEEEEecCCcEE
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYY  427 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~  427 (790)
                      .     .+.-+.+..+.|||||...
T Consensus       263 n-----kgh~gpVhcVrFSPdGE~y  282 (334)
T KOG0278|consen  263 N-----KGHFGPVHCVRFSPDGELY  282 (334)
T ss_pred             c-----cCCCCceEEEEECCCCcee
Confidence            1     1145677889999999854

>KOG1009|consensus

Probab=94.85  E-value=0.27  Score=49.73  Aligned_cols=113  Identities=16%  Similarity=0.089  Sum_probs=62.3

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEE------CCC-----CceeEEEEEeCCCcccccCCceeEccCCCEEE
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCS------INE-----GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKML  312 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~------~~~-----g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~  312 (790)
                      .....+.-+.|+|+|.+++....+. ..-|+...      .++     .+...+...-  .+-..-..+..|+||+..++
T Consensus        63 ~H~~aVN~vRf~p~gelLASg~D~g-~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~l--r~h~~diydL~Ws~d~~~l~  139 (434)
T KOG1009|consen   63 RHTRAVNVVRFSPDGELLASGGDGG-EVFLWKQGDVRIFDADTEADLNKEKWVVKKVL--RGHRDDIYDLAWSPDSNFLV  139 (434)
T ss_pred             CCcceeEEEEEcCCcCeeeecCCCc-eEEEEEecCcCCccccchhhhCccceEEEEEe--cccccchhhhhccCCCceee
Confidence            4556677889999999776654332 11122222      122     1111111110  00001134789999999777


Q ss_pred             EEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          313 LILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       313 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                       +.+      .      -.-++++|+..|.     ....+..+...+.+ .+|+|-+++|.-.+.+
T Consensus       140 -s~s------~------dns~~l~Dv~~G~-----l~~~~~dh~~yvqg-vawDpl~qyv~s~s~d  186 (434)
T KOG1009|consen  140 -SGS------V------DNSVRLWDVHAGQ-----LLAILDDHEHYVQG-VAWDPLNQYVASKSSD  186 (434)
T ss_pred             -eee------c------cceEEEEEeccce-----eEeeccccccccce-eecchhhhhhhhhccC
Confidence             343      1      2357888988776     23344444444444 8899988877666555

>KOG2048|consensus

Probab=94.75  E-value=2.6  Score=45.89  Aligned_cols=117  Identities=15%  Similarity=0.192  Sum_probs=70.7

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      .....++-|+..++...  -+...+...++++..-+.+...... .-........-||||.+|+....            
T Consensus       431 a~~i~ftid~~k~~~~s--~~~~~le~~el~~ps~kel~~~~~~-~~~~~I~~l~~SsdG~yiaa~~t------------  495 (691)
T KOG2048|consen  431 ASAISFTIDKNKLFLVS--KNIFSLEEFELETPSFKELKSIQSQ-AKCPSISRLVVSSDGNYIAAIST------------  495 (691)
T ss_pred             ceeeEEEecCceEEEEe--cccceeEEEEecCcchhhhhccccc-cCCCcceeEEEcCCCCEEEEEec------------
Confidence            45677888888554444  2333477777777654444332211 11122456888999999985433            


Q ss_pred             cccEEEEEEcCCCCcccCCCccccc-CCCeEEeEEEeeec-CCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLT-RGRFTVTEILAWDE-KENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt-~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                       ...|+++++++++      .+.|. .-...++. .+++| +-+.|+.....     .++|.+++..
T Consensus       496 -~g~I~v~nl~~~~------~~~l~~rln~~vTa-~~~~~~~~~~lvvats~-----nQv~efdi~~  549 (691)
T KOG2048|consen  496 -RGQIFVYNLETLE------SHLLKVRLNIDVTA-AAFSPFVRNRLVVATSN-----NQVFEFDIEA  549 (691)
T ss_pred             -cceEEEEEcccce------eecchhccCcceee-eeccccccCcEEEEecC-----CeEEEEecch
Confidence             3479999999886      55544 22233333 55663 44566666555     6889888854

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=94.71  E-value=3.9  Score=43.59  Aligned_cols=203  Identities=14%  Similarity=0.105  Sum_probs=110.6

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      ..+++|++++-.....            ..+.+++.....     ....+..|.  .-.-.+++++++  -+|+..... 
T Consensus        80 ~v~~~~~~vyv~~~~~------------~~v~vid~~~~~-----~~~~~~vG~--~P~~~~~~~~~~--~vYV~n~~~-  137 (381)
T COG3391          80 AVNPAGNKVYVTTGDS------------NTVSVIDTATNT-----VLGSIPVGL--GPVGLAVDPDGK--YVYVANAGN-  137 (381)
T ss_pred             eeCCCCCeEEEecCCC------------CeEEEEcCcccc-----eeeEeeecc--CCceEEECCCCC--EEEEEeccc-
Confidence            6688888777654332            278888855442     222222232  222346666666  455555421 


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT  274 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~  274 (790)
                             ....++++|..++.....     +.                 .+. .-.....+|||+.++..+.  ....|.
T Consensus       138 -------~~~~vsvid~~t~~~~~~-----~~-----------------vG~-~P~~~a~~p~g~~vyv~~~--~~~~v~  185 (381)
T COG3391         138 -------GNNTVSVIDAATNKVTAT-----IP-----------------VGN-TPTGVAVDPDGNKVYVTNS--DDNTVS  185 (381)
T ss_pred             -------CCceEEEEeCCCCeEEEE-----Ee-----------------cCC-CcceEEECCCCCeEEEEec--CCCeEE
Confidence                   125778888776542111     11                 111 1157889999996666652  233488


Q ss_pred             EEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc--c
Q psy463          275 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP--L  352 (790)
Q Consensus       275 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~--l  352 (790)
                      .++.++..... -.....-.-........++|||++++....    .+.      ...+..+|..++.      ...  +
T Consensus       186 vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~----~~~------~~~v~~id~~~~~------v~~~~~  248 (381)
T COG3391         186 VIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVAND----GSG------SNNVLKIDTATGN------VTATDL  248 (381)
T ss_pred             EEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEec----cCC------CceEEEEeCCCce------EEEecc
Confidence            88866654443 110000000011246889999998874332    221      1378888887765      322  2


Q ss_pred             cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          353 TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ..+.. .......+|+|+.+|......    ..++.++...
T Consensus       249 ~~~~~-~~~~v~~~p~g~~~yv~~~~~----~~V~vid~~~  284 (381)
T COG3391         249 PVGSG-APRGVAVDPAGKAAYVANSQG----GTVSVIDGAT  284 (381)
T ss_pred             ccccC-CCCceeECCCCCEEEEEecCC----CeEEEEeCCC
Confidence            22222 112256789999887775552    4677777654

>KOG1524|consensus

Probab=94.60  E-value=1.1  Score=47.27  Aligned_cols=93  Identities=15%  Similarity=0.193  Sum_probs=55.3

Q ss_pred             CceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc-ccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       300 ~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~-lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      ...+|||||..|+ ++.    .+|        .|-++. .+|-      .+. |......+.. .+|.|++..++|....
T Consensus       108 ~~gRW~~dGtgLl-t~G----EDG--------~iKiWS-rsGM------LRStl~Q~~~~v~c-~~W~p~S~~vl~c~g~  166 (737)
T KOG1524|consen  108 SSGRWSPDGAGLL-TAG----EDG--------VIKIWS-RSGM------LRSTVVQNEESIRC-ARWAPNSNSIVFCQGG  166 (737)
T ss_pred             hhcccCCCCceee-eec----CCc--------eEEEEe-ccch------HHHHHhhcCceeEE-EEECCCCCceEEecCC
Confidence            4678999999987 555    678        344444 3342      332 3344444554 8999999999998654


Q ss_pred             CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEE
Q psy463          379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYY  427 (790)
Q Consensus       379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~  427 (790)
                            |++.-++..+ .++-+...       ..+.+-..+|++....|
T Consensus       167 ------h~~IKpL~~n-~k~i~WkA-------HDGiiL~~~W~~~s~lI  201 (737)
T KOG1524|consen  167 ------HISIKPLAAN-SKIIRWRA-------HDGLVLSLSWSTQSNII  201 (737)
T ss_pred             ------eEEEeecccc-cceeEEec-------cCcEEEEeecCccccce
Confidence                  7777776542 22222221       33445556666665544

>KOG0310|consensus

Probab=94.59  E-value=5.3  Score=41.80  Aligned_cols=148  Identities=9%  Similarity=0.038  Sum_probs=84.6

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ....|+...+|+|-..-+.++..-++.  |-++|....... +.+-.. +   .+.....+-|.|..|+ +++      |
T Consensus       151 ~htDYVR~g~~~~~~~hivvtGsYDg~--vrl~DtR~~~~~-v~elnh-g---~pVe~vl~lpsgs~ia-sAg------G  216 (487)
T KOG0310|consen  151 GHTDYVRCGDISPANDHIVVTGSYDGK--VRLWDTRSLTSR-VVELNH-G---CPVESVLALPSGSLIA-SAG------G  216 (487)
T ss_pred             CCcceeEeeccccCCCeEEEecCCCce--EEEEEeccCCce-eEEecC-C---CceeeEEEcCCCCEEE-EcC------C
Confidence            677899999999988833333322222  555555544222 222111 0   2356788999999887 444      5


Q ss_pred             CCCcCcccEEEEEEcCCC-CcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          324 STPVDSWDHLTFIDLDDQ-AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~-~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                             ..+-+||+.+| +     .+.....+.-.++. +...-|+.+|+-.+-+++   .++|.  +..  -+   +.
T Consensus       217 -------n~vkVWDl~~G~q-----ll~~~~~H~KtVTc-L~l~s~~~rLlS~sLD~~---VKVfd--~t~--~K---vv  273 (487)
T KOG0310|consen  217 -------NSVKVWDLTTGGQ-----LLTSMFNHNKTVTC-LRLASDSTRLLSGSLDRH---VKVFD--TTN--YK---VV  273 (487)
T ss_pred             -------CeEEEEEecCCce-----ehhhhhcccceEEE-EEeecCCceEeecccccc---eEEEE--ccc--eE---EE
Confidence                   36889999744 3     12222223335555 677778888877766643   44444  322  11   11


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      ...    .-.+.+-+.++|||++.++...+
T Consensus       274 ~s~----~~~~pvLsiavs~dd~t~viGms  299 (487)
T KOG0310|consen  274 HSW----KYPGPVLSIAVSPDDQTVVIGMS  299 (487)
T ss_pred             Eee----ecccceeeEEecCCCceEEEecc
Confidence            110    01235567889999998877543

>KOG1007|consensus

Probab=94.58  E-value=1.4  Score=42.82  Aligned_cols=151  Identities=16%  Similarity=0.166  Sum_probs=86.8

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-e-EEEEEeCCCcccccCCceeEcc--CCCEEEEEEccccccC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-D-VVFSRDLDRGWFEPFDHLRFSS--DGKKMLLILSHNQESD  322 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~-~l~~~~~~~~~~~~~~~~~~sp--Dg~~i~~~~~~~~~~~  322 (790)
                      +.+.-+.|-||++.++.+.+..    |.+++++.+.. . .+..... .+-...+.+-+|||  ||..++ +.+     +
T Consensus       124 g~i~cvew~Pns~klasm~dn~----i~l~~l~ess~~vaev~ss~s-~e~~~~ftsg~WspHHdgnqv~-tt~-----d  192 (370)
T KOG1007|consen  124 GKINCVEWEPNSDKLASMDDNN----IVLWSLDESSKIVAEVLSSES-AEMRHSFTSGAWSPHHDGNQVA-TTS-----D  192 (370)
T ss_pred             CceeeEEEcCCCCeeEEeccCc----eEEEEcccCcchheeeccccc-ccccceecccccCCCCccceEE-EeC-----C
Confidence            4677899999999666665443    88888876644 2 2222111 11111245789999  899888 444     2


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCe-EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF-TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                      +        .|..+|+.+-+     +.-.|...-. .+.. +.++|+...++.+..+.  +..+||-..-.+  ..++. 
T Consensus       193 ~--------tl~~~D~RT~~-----~~~sI~dAHgq~vrd-lDfNpnkq~~lvt~gDd--gyvriWD~R~tk--~pv~e-  253 (370)
T KOG1007|consen  193 S--------TLQFWDLRTMK-----KNNSIEDAHGQRVRD-LDFNPNKQHILVTCGDD--GYVRIWDTRKTK--FPVQE-  253 (370)
T ss_pred             C--------cEEEEEccchh-----hhcchhhhhcceeee-ccCCCCceEEEEEcCCC--ccEEEEeccCCC--ccccc-
Confidence            3        58888987643     1223332222 2333 78899887777666552  225666432211  11222 


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIG  433 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~  433 (790)
                            +++....+..+.|.|--..++.+...
T Consensus       254 ------l~~HsHWvW~VRfn~~hdqLiLs~~S  279 (370)
T KOG1007|consen  254 ------LPGHSHWVWAVRFNPEHDQLILSGGS  279 (370)
T ss_pred             ------cCCCceEEEEEEecCccceEEEecCC
Confidence                  23355667778888887777666433

>KOG0640|consensus

Probab=94.57  E-value=1.7  Score=42.60  Aligned_cols=118  Identities=12%  Similarity=0.178  Sum_probs=68.7

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...+..+++.|.|.++..-.   +++.+.++|+++-+|-.-... . ..-.+......+|+.|+ ||++.+    .+|  
T Consensus       216 ~~~vrsiSfHPsGefllvgT---dHp~~rlYdv~T~QcfvsanP-d-~qht~ai~~V~Ys~t~~-lYvTaS----kDG--  283 (430)
T KOG0640|consen  216 TEPVRSISFHPSGEFLLVGT---DHPTLRLYDVNTYQCFVSANP-D-DQHTGAITQVRYSSTGS-LYVTAS----KDG--  283 (430)
T ss_pred             cceeeeEeecCCCceEEEec---CCCceeEEeccceeEeeecCc-c-cccccceeEEEecCCcc-EEEEec----cCC--
Confidence            34567899999999544322   234477788888776432221 1 11112244788999998 555777    788  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCccccc--CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLT--RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~  390 (790)
                            +|-++|--++.     ..+.+.  .+.-++-+ ..|..+||+|.-.+.+..   ..||.+.
T Consensus       284 ------~IklwDGVS~r-----Cv~t~~~AH~gsevcS-a~Ftkn~kyiLsSG~DS~---vkLWEi~  335 (430)
T KOG0640|consen  284 ------AIKLWDGVSNR-----CVRTIGNAHGGSEVCS-AVFTKNGKYILSSGKDST---VKLWEIS  335 (430)
T ss_pred             ------cEEeeccccHH-----HHHHHHhhcCCceeee-EEEccCCeEEeecCCcce---eeeeeec
Confidence                  67788743333     233332  23334444 678899986655443322   4555553

>KOG1539|consensus

Probab=94.41  E-value=0.25  Score=54.64  Aligned_cols=63  Identities=14%  Similarity=0.142  Sum_probs=46.0

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      +....+...++|||||++....-++.   |.++|+.++.+......+.      +..+.+|||+|..|+ ++.
T Consensus       574 gh~nritd~~FS~DgrWlisasmD~t---Ir~wDlpt~~lID~~~vd~------~~~sls~SPngD~LA-T~H  636 (910)
T KOG1539|consen  574 GHGNRITDMTFSPDGRWLISASMDST---IRTWDLPTGTLIDGLLVDS------PCTSLSFSPNGDFLA-TVH  636 (910)
T ss_pred             ccccceeeeEeCCCCcEEEEeecCCc---EEEEeccCcceeeeEecCC------cceeeEECCCCCEEE-EEE
Confidence            55667889999999996666554332   9999999997754443321      245799999999998 554

>KOG0310|consensus

Probab=94.36  E-value=2.1  Score=44.67  Aligned_cols=159  Identities=12%  Similarity=0.142  Sum_probs=97.4

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCc-eeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGT-CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~-~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      ........+.+-.||++++.-+..+   .+-+.|..+.. .+.+....      .+.....|+|+++.++.+++    .+
T Consensus        66 rFk~~v~s~~fR~DG~LlaaGD~sG---~V~vfD~k~r~iLR~~~ah~------apv~~~~f~~~d~t~l~s~s----Dd  132 (487)
T KOG0310|consen   66 RFKDVVYSVDFRSDGRLLAAGDESG---HVKVFDMKSRVILRQLYAHQ------APVHVTKFSPQDNTMLVSGS----DD  132 (487)
T ss_pred             hhccceeEEEeecCCeEEEccCCcC---cEEEeccccHHHHHHHhhcc------CceeEEEecccCCeEEEecC----CC
Confidence            3445567888999999666543321   26666644321 12222221      13557889999998875554    23


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcc-cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPV-PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~-~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                      +        -+-.+|+.+..      .. .|+.+...+.. .+|+|....+++++...+  ..+||-....+  .+...+
T Consensus       133 ~--------v~k~~d~s~a~------v~~~l~~htDYVR~-g~~~~~~~hivvtGsYDg--~vrl~DtR~~~--~~v~el  193 (487)
T KOG0310|consen  133 K--------VVKYWDLSTAY------VQAELSGHTDYVRC-GDISPANDHIVVTGSYDG--KVRLWDTRSLT--SRVVEL  193 (487)
T ss_pred             c--------eEEEEEcCCcE------EEEEecCCcceeEe-eccccCCCeEEEecCCCc--eEEEEEeccCC--ceeEEe
Confidence            3        34556776665      32 35555555665 789999888999887732  26666555443  222223


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .        ..+.+.++.+-|.|+.|+. +   +-|++.++|+.+
T Consensus       194 n--------hg~pVe~vl~lpsgs~ias-A---gGn~vkVWDl~~  226 (487)
T KOG0310|consen  194 N--------HGCPVESVLALPSGSLIAS-A---GGNSVKVWDLTT  226 (487)
T ss_pred             c--------CCCceeeEEEcCCCCEEEE-c---CCCeEEEEEecC
Confidence            3        4577888888898887643 2   346699999874

>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function

Probab=94.33  E-value=0.15  Score=49.21  Aligned_cols=52  Identities=19%  Similarity=0.090  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCC
Q psy463          566 DQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAP  618 (790)
Q Consensus       566 D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~  618 (790)
                      ....|++++....... ..++.|.|||.||.+|.+++...+.   +++..+....+
T Consensus        67 ~q~~A~~yl~~~~~~~-~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg  121 (224)
T PF11187_consen   67 QQKSALAYLKKIAKKY-PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG  121 (224)
T ss_pred             HHHHHHHHHHHHHHhC-CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence            3345566655422222 2469999999999999998886432   25566665544

>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]

Probab=94.09  E-value=0.078  Score=52.91  Aligned_cols=61  Identities=15%  Similarity=0.132  Sum_probs=47.1

Q ss_pred             hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463          721 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL  785 (790)
Q Consensus       721 ~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl  785 (790)
                      .++ ..|-.|+.+..|...+++++.-+++.|+..   .-+.++|+..|...+ .-++.+.-.+.+|
T Consensus       326 ~RL-alpKyivnaSgDdff~pDsa~lYyd~LPG~---kaLrmvPN~~H~~~n~~i~esl~~flnrf  387 (507)
T COG4287         326 LRL-ALPKYIVNASGDDFFVPDSANLYYDDLPGE---KALRMVPNDPHNLINQFIKESLEPFLNRF  387 (507)
T ss_pred             hhc-cccceeecccCCcccCCCccceeeccCCCc---eeeeeCCCCcchhhHHHHHHHHHHHHHHH
Confidence            466 799999999999999999999999998754   467889999998875 3344444444444

>KOG1551|consensus

Probab=93.93  E-value=0.14  Score=48.72  Aligned_cols=55  Identities=13%  Similarity=0.020  Sum_probs=41.7

Q ss_pred             EEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHH
Q psy463          728 YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDS  787 (790)
Q Consensus       728 ~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~  787 (790)
                      +.++.+++|..+|......+.+.++  |.+++++.   .||.-..  ..+.+-++|.+-|++
T Consensus       309 ~ivv~A~~D~Yipr~gv~~lQ~~WP--g~eVr~~e---gGHVsayl~k~dlfRR~I~d~L~R  365 (371)
T KOG1551|consen  309 IIVVQAKEDAYIPRTGVRSLQEIWP--GCEVRYLE---GGHVSAYLFKQDLFRRAIVDGLDR  365 (371)
T ss_pred             EEEEEecCCccccccCcHHHHHhCC--CCEEEEee---cCceeeeehhchHHHHHHHHHHHh
Confidence            5667899999999988888888876  45556554   4897665  677777888887765

>KOG1332|consensus

Probab=93.88  E-value=6.1  Score=37.63  Aligned_cols=157  Identities=11%  Similarity=0.104  Sum_probs=79.6

Q ss_pred             CCCCEEEEEEEccCCc--EEEEEeccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccC---C---------
Q psy463          244 NVEPVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSD---G---------  308 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~--~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spD---g---------  308 (790)
                      ........++|.|.+-  .++....+ +.-.|..++.+++-. ..+...-    -++ ..+..|.|-   |         
T Consensus       100 ~h~~SVNsV~wapheygl~LacasSD-G~vsvl~~~~~g~w~t~ki~~aH----~~G-vnsVswapa~~~g~~~~~~~~~  173 (299)
T KOG1332|consen  100 AHSASVNSVAWAPHEYGLLLACASSD-GKVSVLTYDSSGGWTTSKIVFAH----EIG-VNSVSWAPASAPGSLVDQGPAA  173 (299)
T ss_pred             hhcccceeecccccccceEEEEeeCC-CcEEEEEEcCCCCccchhhhhcc----ccc-cceeeecCcCCCccccccCccc
Confidence            3445677889999887  44444433 333466666664322 2222110    011 457788775   5         


Q ss_pred             --CEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCC----EEEEEEcCCCCc
Q psy463          309 --KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKEN----NVYFLSTQGSPI  382 (790)
Q Consensus       309 --~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~----~l~~~~~~~~~~  382 (790)
                        ++|+ ...    -+.      .-.||..+-+.=+     ..+.|..+..-++. .+|.|.-.    +|+-.+.++.  
T Consensus       174 ~~krlv-SgG----cDn------~VkiW~~~~~~w~-----~e~~l~~H~dwVRD-VAwaP~~gl~~s~iAS~SqDg~--  234 (299)
T KOG1332|consen  174 KVKRLV-SGG----CDN------LVKIWKFDSDSWK-----LERTLEGHKDWVRD-VAWAPSVGLPKSTIASCSQDGT--  234 (299)
T ss_pred             ccceee-ccC----Ccc------ceeeeecCCcchh-----hhhhhhhcchhhhh-hhhccccCCCceeeEEecCCCc--
Confidence              2233 111    111      2234444322111     12336655555555 77887642    3333334433  


Q ss_pred             eEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463          383 VQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG  433 (790)
Q Consensus       383 ~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~  433 (790)
                       .-||..+.+....+.+.|..       -.+....++||..|..|+.+...
T Consensus       235 -viIwt~~~e~e~wk~tll~~-------f~~~~w~vSWS~sGn~LaVs~Gd  277 (299)
T KOG1332|consen  235 -VIIWTKDEEYEPWKKTLLEE-------FPDVVWRVSWSLSGNILAVSGGD  277 (299)
T ss_pred             -EEEEEecCccCccccccccc-------CCcceEEEEEeccccEEEEecCC
Confidence             56676664432233444433       24567889999999988776433

>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants

Probab=93.88  E-value=0.75  Score=44.29  Aligned_cols=93  Identities=17%  Similarity=-0.023  Sum_probs=51.6

Q ss_pred             EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC
Q psy463          503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID  582 (790)
Q Consensus       503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d  582 (790)
                      .||.+-||..... .....+.+..+.++++||.|++.-|.-+=.+..-   +      .........+++.+... ...+
T Consensus        18 gvihFiGGaf~ga-~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~---A------~~~~~~f~~~~~~L~~~-~~~~   86 (250)
T PF07082_consen   18 GVIHFIGGAFVGA-APQITYRYLLERLADRGYAVIATPYVVTFDHQAI---A------REVWERFERCLRALQKR-GGLD   86 (250)
T ss_pred             EEEEEcCcceecc-CcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHH---H------HHHHHHHHHHHHHHHHh-cCCC
Confidence            4556667766433 3333444444555568999999888532111100   0      01123333455555542 2232


Q ss_pred             C--CceEEEEechHHHHHHHHHhcCC
Q psy463          583 K--TRTAIWGWSYGGYATGLALALDP  606 (790)
Q Consensus       583 ~--~ri~i~G~S~GG~~a~~~a~~~p  606 (790)
                      .  -++.=+|||+|+-+-+.+.....
T Consensus        87 ~~~lP~~~vGHSlGcklhlLi~s~~~  112 (250)
T PF07082_consen   87 PAYLPVYGVGHSLGCKLHLLIGSLFD  112 (250)
T ss_pred             cccCCeeeeecccchHHHHHHhhhcc
Confidence            2  26778999999999888776554

Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.

>KOG0289|consensus

Probab=93.74  E-value=7.7  Score=40.10  Aligned_cols=116  Identities=13%  Similarity=0.174  Sum_probs=70.2

Q ss_pred             CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      +..++...+.|||- +...+..+    .+-++|+..+..  +..-++..   .+...+.||-+|=+++ +..    .++ 
T Consensus       347 ~v~~ts~~fHpDgLifgtgt~d~----~vkiwdlks~~~--~a~Fpght---~~vk~i~FsENGY~La-t~a----dd~-  411 (506)
T KOG0289|consen  347 DVEYTSAAFHPDGLIFGTGTPDG----VVKIWDLKSQTN--VAKFPGHT---GPVKAISFSENGYWLA-TAA----DDG-  411 (506)
T ss_pred             cceeEEeeEcCCceEEeccCCCc----eEEEEEcCCccc--cccCCCCC---CceeEEEeccCceEEE-EEe----cCC-
Confidence            45578899999998 44333333    377788877652  32222211   2356899999998887 444    345 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                             .+.++|+..-+   +.+..++... .++.. +.+++.|+++...++.     -.+|...-.+
T Consensus       412 -------~V~lwDLRKl~---n~kt~~l~~~-~~v~s-~~fD~SGt~L~~~g~~-----l~Vy~~~k~~  463 (506)
T KOG0289|consen  412 -------SVKLWDLRKLK---NFKTIQLDEK-KEVNS-LSFDQSGTYLGIAGSD-----LQVYICKKKT  463 (506)
T ss_pred             -------eEEEEEehhhc---ccceeecccc-cccee-EEEcCCCCeEEeecce-----eEEEEEeccc
Confidence                   48899986433   1123333322 24444 7899999987776443     5666665433

>PRK02888 nitrous-oxide reductase; Validated

Probab=93.68  E-value=1.1  Score=49.37  Aligned_cols=156  Identities=13%  Similarity=0.094  Sum_probs=80.3

Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  330 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~  330 (790)
                      .+=++|||+.+...+  .-...+..+|.++.+........+      ......++|||++++++.. +. ..|       
T Consensus       197 ~~PlpnDGk~l~~~~--ey~~~vSvID~etmeV~~qV~Vdg------npd~v~~spdGk~afvTsy-Ns-E~G-------  259 (635)
T PRK02888        197 RIPLPNDGKDLDDPK--KYRSLFTAVDAETMEVAWQVMVDG------NLDNVDTDYDGKYAFSTCY-NS-EEG-------  259 (635)
T ss_pred             ccccCCCCCEeeccc--ceeEEEEEEECccceEEEEEEeCC------CcccceECCCCCEEEEecc-Cc-ccC-------
Confidence            445688999553332  233457788888765433222221      1347899999999986543 11 123       


Q ss_pred             cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCC
Q psy463          331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSAN  410 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~  410 (790)
                      ..+..++.....       ..+.   +.....-.+.+||+..++.  .     .++-+++...+...-..++.-+.    
T Consensus       260 ~tl~em~a~e~d-------~~vv---fni~~iea~vkdGK~~~V~--g-----n~V~VID~~t~~~~~~~v~~yIP----  318 (635)
T PRK02888        260 VTLAEMMAAERD-------WVVV---FNIARIEEAVKAGKFKTIG--G-----SKVPVVDGRKAANAGSALTRYVP----  318 (635)
T ss_pred             cceeeeccccCc-------eEEE---EchHHHHHhhhCCCEEEEC--C-----CEEEEEECCccccCCcceEEEEE----
Confidence            245555542211       0010   0001112456788876652  1     35667775431000011111000    


Q ss_pred             CcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          411 QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       411 ~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      -...-..+.+||||++++.+  +..-+.+-++|++.
T Consensus       319 VGKsPHGV~vSPDGkylyVa--nklS~tVSVIDv~k  352 (635)
T PRK02888        319 VPKNPHGVNTSPDGKYFIAN--GKLSPTVTVIDVRK  352 (635)
T ss_pred             CCCCccceEECCCCCEEEEe--CCCCCcEEEEEChh
Confidence            01234568899999998765  23356788888765

>KOG1332|consensus

Probab=93.49  E-value=7.2  Score=37.17  Aligned_cols=76  Identities=13%  Similarity=0.094  Sum_probs=43.6

Q ss_pred             CCceeEccCC---C-EEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEE
Q psy463          299 FDHLRFSSDG---K-KMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYF  374 (790)
Q Consensus       299 ~~~~~~spDg---~-~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~  374 (790)
                      .++.+|.|.-   + .|+ .++    .+|      .--||..+.+.++    .+.+.|.... .+....+||..|..|.+
T Consensus       210 VRDVAwaP~~gl~~s~iA-S~S----qDg------~viIwt~~~e~e~----wk~tll~~f~-~~~w~vSWS~sGn~LaV  273 (299)
T KOG1332|consen  210 VRDVAWAPSVGLPKSTIA-SCS----QDG------TVIIWTKDEEYEP----WKKTLLEEFP-DVVWRVSWSLSGNILAV  273 (299)
T ss_pred             hhhhhhccccCCCceeeE-Eec----CCC------cEEEEEecCccCc----ccccccccCC-cceEEEEEeccccEEEE
Confidence            3578898864   2 233 455    566      3445555533222    2344454432 33344899999998877


Q ss_pred             EEcCCCCceEEEEEEEcCC
Q psy463          375 LSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       375 ~~~~~~~~~~~l~~~~~~~  393 (790)
                      ...+..   ..||+-++++
T Consensus       274 s~GdNk---vtlwke~~~G  289 (299)
T KOG1332|consen  274 SGGDNK---VTLWKENVDG  289 (299)
T ss_pred             ecCCcE---EEEEEeCCCC
Confidence            765533   6677766654

>KOG4378|consensus

Probab=93.42  E-value=8.4  Score=40.54  Aligned_cols=138  Identities=10%  Similarity=0.111  Sum_probs=81.3

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCc
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGT  282 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~  282 (790)
                      ++|-+..+.++..     ...++                +.......-+.+||-.| ++.......   .+.++|+.+..
T Consensus       143 Gdiiih~~~t~~~-----tt~f~----------------~~sgqsvRll~ys~skr~lL~~asd~G---~VtlwDv~g~s  198 (673)
T KOG4378|consen  143 GDIIIHGTKTKQK-----TTTFT----------------IDSGQSVRLLRYSPSKRFLLSIASDKG---AVTLWDVQGMS  198 (673)
T ss_pred             CcEEEEecccCcc-----cccee----------------cCCCCeEEEeecccccceeeEeeccCC---eEEEEeccCCC
Confidence            5777777777653     23333                23344556888999999 333332221   27778877654


Q ss_pred             eeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEE
Q psy463          283 CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI  362 (790)
Q Consensus       283 ~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~  362 (790)
                      ..--..+.    .-.+...+.|||-...|++.+.    -        -..|+++|....+     ....|+-. .... .
T Consensus       199 p~~~~~~~----HsAP~~gicfspsne~l~vsVG----~--------Dkki~~yD~~s~~-----s~~~l~y~-~Pls-t  255 (673)
T KOG4378|consen  199 PIFHASEA----HSAPCRGICFSPSNEALLVSVG----Y--------DKKINIYDIRSQA-----STDRLTYS-HPLS-T  255 (673)
T ss_pred             cccchhhh----ccCCcCcceecCCccceEEEec----c--------cceEEEeeccccc-----ccceeeec-CCcc-e
Confidence            43111110    1124568999999988875554    2        2379999976544     23445432 1122 3


Q ss_pred             EeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          363 LAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ++++++|-+|..-...     .+|+.+++.+
T Consensus       256 vaf~~~G~~L~aG~s~-----G~~i~YD~R~  281 (673)
T KOG4378|consen  256 VAFSECGTYLCAGNSK-----GELIAYDMRS  281 (673)
T ss_pred             eeecCCceEEEeecCC-----ceEEEEeccc
Confidence            7899999766554443     6888898876

>KOG0647|consensus

Probab=93.36  E-value=8.8  Score=37.79  Aligned_cols=84  Identities=21%  Similarity=0.199  Sum_probs=50.0

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      +-+++.|||.-+.++-++.=++.+.+|.+...|..      .|+.........-.+.|++|+..++-..   -...+.++
T Consensus        29 sIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~------~~ka~~~~~~PvL~v~WsddgskVf~g~---~Dk~~k~w   99 (347)
T KOG0647|consen   29 SISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL------VPKAQQSHDGPVLDVCWSDDGSKVFSGG---CDKQAKLW   99 (347)
T ss_pred             chheeEeccccCceEEecccCCceEEEEEecCCcc------cchhhhccCCCeEEEEEccCCceEEeec---cCCceEEE
Confidence            34789999966666656677899999999998653      3333333333334567887774332111   12235566


Q ss_pred             eCCCCeeeEEEee
Q psy463           89 SINEGTCDVVFSR  101 (790)
Q Consensus        89 ~~~~~~~~~~~~~  101 (790)
                      +..+++.+.+-.+
T Consensus       100 DL~S~Q~~~v~~H  112 (347)
T KOG0647|consen  100 DLASGQVSQVAAH  112 (347)
T ss_pred             EccCCCeeeeeec
Confidence            6666655554443

>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.22  E-value=0.25  Score=49.88  Aligned_cols=116  Identities=19%  Similarity=0.122  Sum_probs=62.0

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeE--EEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV--VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE  576 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~--v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~  576 (790)
                      ...-++||+||...+..  +  ...-..+++...|+.  .+.+..+..+.   -+.+...+.--.+...++...+++|..
T Consensus       114 ~~k~vlvFvHGfNntf~--d--av~R~aqI~~d~g~~~~pVvFSWPS~g~---l~~Yn~DreS~~~Sr~aLe~~lr~La~  186 (377)
T COG4782         114 SAKTVLVFVHGFNNTFE--D--AVYRTAQIVHDSGNDGVPVVFSWPSRGS---LLGYNYDRESTNYSRPALERLLRYLAT  186 (377)
T ss_pred             CCCeEEEEEcccCCchh--H--HHHHHHHHHhhcCCCcceEEEEcCCCCe---eeecccchhhhhhhHHHHHHHHHHHHh
Confidence            34568999999865421  1  011122344333433  33344332111   000111111112446777888888887


Q ss_pred             hCCCcCCCceEEEEechHHHHHHHHHhc----CCC---CceEEEEEeCCCCCccc
Q psy463          577 NLPYIDKTRTAIWGWSYGGYATGLALAL----DPS---NVFKCGISVAPVTDWIY  624 (790)
Q Consensus       577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~----~p~---~~~~~~v~~~~~~~~~~  624 (790)
                      ..+   ..+|.|+.||||.++++.++.+    ...   ..++-+|..+|=.+...
T Consensus       187 ~~~---~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV  238 (377)
T COG4782         187 DKP---VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV  238 (377)
T ss_pred             CCC---CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence            333   5799999999999999776543    111   13556666677555443

>KOG0277|consensus

Probab=93.15  E-value=3.3  Score=39.60  Aligned_cols=163  Identities=16%  Similarity=0.250  Sum_probs=93.3

Q ss_pred             EEEEcc--CCcE-EEEEec--cCcceEEEEEECCC-CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          251 RVNWAN--ESVV-AAWVNR--VQNRARITRCSINE-GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       251 ~~~wsp--Dg~~-~~~~~r--~~~~~~i~~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      .+.+||  ++++ ++....  -.+..+|+++++.+ +..+....-+    |.+...+.+||+.-..+++.++    .+| 
T Consensus        13 svqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d----~~D~LfdV~Wse~~e~~~~~a~----GDG-   83 (311)
T KOG0277|consen   13 SVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYD----TEDGLFDVAWSENHENQVIAAS----GDG-   83 (311)
T ss_pred             eeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeee----cccceeEeeecCCCcceEEEEe----cCc-
Confidence            577888  6773 332221  12334699999863 3333222211    1112347999999888886776    566 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC-CCCceEEEEEEEcCCCCCCcceeee
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                             .|-++|+.-..    .+.+.+..+.-++.+ ..|++-.+..+.++.- +.   .+||..+...      .+..
T Consensus        84 -------SLrl~d~~~~s----~Pi~~~kEH~~EV~S-vdwn~~~r~~~ltsSWD~T---iKLW~~~r~~------Sv~T  142 (311)
T KOG0277|consen   84 -------SLRLFDLTMPS----KPIHKFKEHKREVYS-VDWNTVRRRIFLTSSWDGT---IKLWDPNRPN------SVQT  142 (311)
T ss_pred             -------eEEEeccCCCC----cchhHHHhhhhheEE-eccccccceeEEeeccCCc---eEeecCCCCc------ceEe
Confidence                   46677743221    012233344555655 7898888888777754 43   6777654422      2221


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                          ..+++..+.+..|||--.-++.+.++.+.-.++=++..++
T Consensus       143 ----f~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk  182 (311)
T KOG0277|consen  143 ----FNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGK  182 (311)
T ss_pred             ----ecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCc
Confidence                2346667888999998766767766666444444444443

>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=93.14  E-value=0.29  Score=48.14  Aligned_cols=101  Identities=13%  Similarity=0.033  Sum_probs=56.2

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHH-HHHHHHhCCC
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINV-TRYLQENLPY  580 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~  580 (790)
                      |.|+++|+..|...     .+.-....+. .-..|+..+.+|.+.....+          ..+++..+. ++.+.+..| 
T Consensus         1 ~pLF~fhp~~G~~~-----~~~~L~~~l~-~~~~v~~l~a~g~~~~~~~~----------~~l~~~a~~yv~~Ir~~QP-   63 (257)
T COG3319           1 PPLFCFHPAGGSVL-----AYAPLAAALG-PLLPVYGLQAPGYGAGEQPF----------ASLDDMAAAYVAAIRRVQP-   63 (257)
T ss_pred             CCEEEEcCCCCcHH-----HHHHHHHHhc-cCceeeccccCccccccccc----------CCHHHHHHHHHHHHHHhCC-
Confidence            46889999877621     1111122233 23668888887754322111          234444432 334444344 


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcC--CCCceEEEEEeCCCCC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALD--PSNVFKCGISVAPVTD  621 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~--p~~~~~~~v~~~~~~~  621 (790)
                        ...+.+.|||+||.+|.-+|.+-  ....++.++.+.++..
T Consensus        64 --~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~  104 (257)
T COG3319          64 --EGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP  104 (257)
T ss_pred             --CCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence              35899999999999998877542  1224555555544433

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.09  E-value=9.5  Score=37.38  Aligned_cols=108  Identities=10%  Similarity=0.063  Sum_probs=62.4

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCe-EEeEEEeeecCCCEEEEEEc
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF-TVTEILAWDEKENNVYFLST  377 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~-~~~~~~~~s~dg~~l~~~~~  377 (790)
                      .+.+.++|--+.-++++.    +.|+       .-+++|..+..     .+..+...+. ...+.-.|||||++||-+-+
T Consensus        70 ~Hgi~~~p~~~ravafAR----rPGt-------f~~vfD~~~~~-----~pv~~~s~~~RHfyGHGvfs~dG~~LYATEn  133 (366)
T COG3490          70 GHGIAFHPALPRAVAFAR----RPGT-------FAMVFDPNGAQ-----EPVTLVSQEGRHFYGHGVFSPDGRLLYATEN  133 (366)
T ss_pred             cCCeecCCCCcceEEEEe----cCCc-------eEEEECCCCCc-----CcEEEecccCceeecccccCCCCcEEEeecC
Confidence            457889998776554554    5672       35778887765     2444443322 22333578999999998887


Q ss_pred             C--CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          378 Q--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       378 ~--~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      +  .+.+-.-||...  .   ...++-. .   .+..-.-..+.+.+||+.++..-
T Consensus       134 dfd~~rGViGvYd~r--~---~fqrvgE-~---~t~GiGpHev~lm~DGrtlvvan  180 (366)
T COG3490         134 DFDPNRGVIGVYDAR--E---GFQRVGE-F---STHGIGPHEVTLMADGRTLVVAN  180 (366)
T ss_pred             CCCCCCceEEEEecc--c---ccceecc-c---ccCCcCcceeEEecCCcEEEEeC
Confidence            7  233334455443  2   1111111 0   00122345689999999988753

>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []

Probab=92.95  E-value=0.2  Score=44.72  Aligned_cols=53  Identities=30%  Similarity=0.278  Sum_probs=34.1

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC------CCceEEEEEeCCC
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP------SNVFKCGISVAPV  619 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p------~~~~~~~v~~~~~  619 (790)
                      ...+...++.+.++.+   ..+|.++|||+||.+|..++....      ...+.+....+|.
T Consensus        47 ~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~  105 (140)
T PF01764_consen   47 YDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPR  105 (140)
T ss_dssp             HHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S-
T ss_pred             HHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcc
Confidence            4455566666666444   478999999999999877665421      1346666666654

Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....

>KOG0316|consensus

Probab=92.94  E-value=4.9  Score=37.99  Aligned_cols=104  Identities=13%  Similarity=0.072  Sum_probs=63.1

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ..+-+..+.+.-||++......+   ..+.++++-.|.+-.-+..-+.     -.-+...|.|..+|+ ...      | 
T Consensus        16 ~qgaV~avryN~dGnY~ltcGsd---rtvrLWNp~rg~liktYsghG~-----EVlD~~~s~Dnskf~-s~G------g-   79 (307)
T KOG0316|consen   16 AQGAVRAVRYNVDGNYCLTCGSD---RTVRLWNPLRGALIKTYSGHGH-----EVLDAALSSDNSKFA-SCG------G-   79 (307)
T ss_pred             cccceEEEEEccCCCEEEEcCCC---ceEEeecccccceeeeecCCCc-----eeeeccccccccccc-cCC------C-
Confidence            34556778888999954433221   1277777777766544433211     134677788888887 332      4 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEE
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLS  376 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~  376 (790)
                           -..++++|+.+|+     ..+.+..+...+.. ..|+.+.. +++.+
T Consensus        80 -----Dk~v~vwDV~TGk-----v~Rr~rgH~aqVNt-V~fNeesS-Vv~Sg  119 (307)
T KOG0316|consen   80 -----DKAVQVWDVNTGK-----VDRRFRGHLAQVNT-VRFNEESS-VVASG  119 (307)
T ss_pred             -----CceEEEEEcccCe-----eeeecccccceeeE-EEecCcce-EEEec
Confidence                 4579999999988     35566655555544 66765543 44443

>KOG0641|consensus

Probab=92.88  E-value=8.1  Score=36.04  Aligned_cols=73  Identities=16%  Similarity=0.121  Sum_probs=47.3

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      -+..+..-|.|++++.-.   ....+.++|+.+|...+-+..-..     -....+|||...++. +.+    -      
T Consensus       233 avaav~vdpsgrll~sg~---~dssc~lydirg~r~iq~f~phsa-----dir~vrfsp~a~yll-t~s----y------  293 (350)
T KOG0641|consen  233 AVAAVAVDPSGRLLASGH---ADSSCMLYDIRGGRMIQRFHPHSA-----DIRCVRFSPGAHYLL-TCS----Y------  293 (350)
T ss_pred             eeEEEEECCCcceeeecc---CCCceEEEEeeCCceeeeeCCCcc-----ceeEEEeCCCceEEE-Eec----c------
Confidence            467888999999665432   233488999999877655543211     145789999876655 555    1      


Q ss_pred             CcccEEEEEEcCCC
Q psy463          328 DSWDHLTFIDLDDQ  341 (790)
Q Consensus       328 ~~~~~l~~~d~~~~  341 (790)
                        -..|-+.|+.+.
T Consensus       294 --d~~ikltdlqgd  305 (350)
T KOG0641|consen  294 --DMKIKLTDLQGD  305 (350)
T ss_pred             --cceEEEeecccc
Confidence              235777787654

>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]

Probab=92.86  E-value=0.32  Score=50.63  Aligned_cols=99  Identities=12%  Similarity=0.018  Sum_probs=55.4

Q ss_pred             EEEEEcCCCCccccccccccchHHHHHhcCCeE---EEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV---VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~---v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      .+|++||....   ...|..  ..+.+...|+.   +..++..+.......          ....+-+.+-++.+..   
T Consensus        61 pivlVhG~~~~---~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~ql~~~V~~~l~---  122 (336)
T COG1075          61 PIVLVHGLGGG---YGNFLP--LDYRLAILGWLTNGVYAFELSGGDGTYSL----------AVRGEQLFAYVDEVLA---  122 (336)
T ss_pred             eEEEEccCcCC---cchhhh--hhhhhcchHHHhcccccccccccCCCccc----------cccHHHHHHHHHHHHh---
Confidence            46789997443   222221  22224445555   666665543111100          0223334444444444   


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCC-CceEEEEEeCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPS-NVFKCGISVAPV  619 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~-~~~~~~v~~~~~  619 (790)
                      ....+++.++||||||.++.+++...+. ..++.++..++.
T Consensus       123 ~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp  163 (336)
T COG1075         123 KTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP  163 (336)
T ss_pred             hcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence            2345899999999999999988887652 256667766654

>KOG0268|consensus

Probab=92.81  E-value=1.6  Score=43.81  Aligned_cols=143  Identities=10%  Similarity=0.131  Sum_probs=78.2

Q ss_pred             CCEEEEEEEccCCc-EEEEE-eccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          246 EPVLSRVNWANESV-VAAWV-NRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       246 ~~~~~~~~wspDg~-~~~~~-~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      ...+..+.++|--. +++.. +.+.    |+++|+..+.+ +.+.....       ...++|+|.+  +.|++.   +.+
T Consensus       187 ~Dti~svkfNpvETsILas~~sDrs----IvLyD~R~~~Pl~KVi~~mR-------TN~IswnPea--fnF~~a---~ED  250 (433)
T KOG0268|consen  187 ADSISSVKFNPVETSILASCASDRS----IVLYDLRQASPLKKVILTMR-------TNTICWNPEA--FNFVAA---NED  250 (433)
T ss_pred             CCceeEEecCCCcchheeeeccCCc----eEEEecccCCccceeeeecc-------ccceecCccc--cceeec---ccc
Confidence            34456777888777 55544 2222    99999987654 33333221       3479999943  444554   233


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                      .        .||.+|...=+     .+..+-.+-........+||-|+.++-.+-+..   .+||-++-..  ......|
T Consensus       251 ~--------nlY~~DmR~l~-----~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDks---IRIf~~~~~~--SRdiYht  312 (433)
T KOG0268|consen  251 H--------NLYTYDMRNLS-----RPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKS---IRIFPVNHGH--SRDIYHT  312 (433)
T ss_pred             c--------cceehhhhhhc-----ccchhhcccceeEEEeccCCCcchhccccccce---EEEeecCCCc--chhhhhH
Confidence            3        69999865322     022222221111223789999997766655532   4555544322  1111112


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEE
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVL  429 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~  429 (790)
                      .       .-..+..+.||-|.+||+-
T Consensus       313 k-------RMq~V~~Vk~S~Dskyi~S  332 (433)
T KOG0268|consen  313 K-------RMQHVFCVKYSMDSKYIIS  332 (433)
T ss_pred             h-------hhheeeEEEEeccccEEEe
Confidence            1       1235667899999998743

>KOG1920|consensus

Probab=92.54  E-value=7.7  Score=45.67  Aligned_cols=63  Identities=13%  Similarity=0.108  Sum_probs=43.5

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      +++..+..+.+--|+. ++..+..+.    |.++|.++.....+...+.      ......||||++.++++..
T Consensus        66 ~gd~~i~s~~fl~d~~~i~v~~~~G~----iilvd~et~~~eivg~vd~------GI~aaswS~Dee~l~liT~  129 (1265)
T KOG1920|consen   66 DGDDEIVSVQFLADTNSICVITALGD----IILVDPETLELEIVGNVDN------GISAASWSPDEELLALITG  129 (1265)
T ss_pred             CCCcceEEEEEecccceEEEEecCCc----EEEEcccccceeeeeeccC------ceEEEeecCCCcEEEEEeC
Confidence            3445677888888888 555554443    8888888877665555432      1457999999999986543

>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases

Probab=92.49  E-value=0.21  Score=48.42  Aligned_cols=20  Identities=30%  Similarity=0.486  Sum_probs=17.2

Q ss_pred             CceEEEEechHHHHHHHHHh
Q psy463          584 TRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       584 ~ri~i~G~S~GG~~a~~~a~  603 (790)
                      .+|.++|||+||.++-.++.
T Consensus        78 ~~IsfIgHSLGGli~r~al~   97 (217)
T PF05057_consen   78 RKISFIGHSLGGLIARYALG   97 (217)
T ss_pred             ccceEEEecccHHHHHHHHH
Confidence            58999999999999876655

>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2

Probab=92.20  E-value=5.6  Score=42.33  Aligned_cols=106  Identities=20%  Similarity=0.108  Sum_probs=64.3

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeE-EEEEcCCCCCCChhhhHhhhhccCCccch-hHHHHHHHHHH
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV-VAYIDGRNSALKGNTLKYAGYRRLGTVEI-YDQINVTRYLQ  575 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~-v~~~d~rG~~~~g~~~~~~~~~~~~~~~~-~D~~~~~~~l~  575 (790)
                      .-+.|+.|++-|.-..    ++|...   .++.+.|.- .+.-|.|--||   +|.-      |..++ +.+.+.++..+
T Consensus       286 D~KPPL~VYFSGyR~a----EGFEgy---~MMk~Lg~PfLL~~DpRleGG---aFYl------Gs~eyE~~I~~~I~~~L  349 (511)
T TIGR03712       286 DFKPPLNVYFSGYRPA----EGFEGY---FMMKRLGAPFLLIGDPRLEGG---AFYL------GSDEYEQGIINVIQEKL  349 (511)
T ss_pred             CCCCCeEEeeccCccc----CcchhH---HHHHhcCCCeEEeeccccccc---eeee------CcHHHHHHHHHHHHHHH
Confidence            3456899999886543    223222   223334444 56778885333   1110      11111 23344555555


Q ss_pred             HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463          576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                      +.++ .+.+.+.+.|.|||-+-|+++++.-   .-.|+|.+-|++++.
T Consensus       350 ~~Lg-F~~~qLILSGlSMGTfgAlYYga~l---~P~AIiVgKPL~NLG  393 (511)
T TIGR03712       350 DYLG-FDHDQLILSGLSMGTFGALYYGAKL---SPHAIIVGKPLVNLG  393 (511)
T ss_pred             HHhC-CCHHHeeeccccccchhhhhhcccC---CCceEEEcCcccchh
Confidence            4355 7889999999999999999998743   345888888988764

This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>KOG1539|consensus

Probab=92.14  E-value=2.2  Score=47.62  Aligned_cols=82  Identities=16%  Similarity=0.151  Sum_probs=51.7

Q ss_pred             eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463          271 ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  350 (790)
Q Consensus       271 ~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~  350 (790)
                      ..|.++|..+.+..+.+..-+     +...+..||||||||+ +++    .++        .|.++|+.++.      ..
T Consensus       556 f~I~vvD~~t~kvvR~f~gh~-----nritd~~FS~DgrWli-sas----mD~--------tIr~wDlpt~~------lI  611 (910)
T KOG1539|consen  556 FSIRVVDVVTRKVVREFWGHG-----NRITDMTFSPDGRWLI-SAS----MDS--------TIRTWDLPTGT------LI  611 (910)
T ss_pred             eeEEEEEchhhhhhHHhhccc-----cceeeeEeCCCCcEEE-Eee----cCC--------cEEEEeccCcc------ee
Confidence            458888887765544333111     1145899999999998 555    455        58899998876      22


Q ss_pred             c-ccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          351 P-LTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       351 ~-lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      - +.-. .... .+++||.|..|+-...+
T Consensus       612 D~~~vd-~~~~-sls~SPngD~LAT~Hvd  638 (910)
T KOG1539|consen  612 DGLLVD-SPCT-SLSFSPNGDFLATVHVD  638 (910)
T ss_pred             eeEecC-Ccce-eeEECCCCCEEEEEEec
Confidence            1 1111 1112 37899999977766554

>KOG2521|consensus

Probab=92.00  E-value=3.8  Score=42.14  Aligned_cols=64  Identities=16%  Similarity=0.128  Sum_probs=58.3

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHh
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSC  788 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~  788 (790)
                      ..+.|.+.+..|.++|.++.+.+.+..++.|+.++.+-+.++-|..+.  .+..+.+...+|++++
T Consensus       225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~  290 (350)
T KOG2521|consen  225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV  290 (350)
T ss_pred             cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence            467888889999999999999999999999999999999999998765  8899999999999876

>cd00741 Lipase Lipase

Probab=91.94  E-value=0.4  Score=43.53  Aligned_cols=25  Identities=28%  Similarity=0.226  Sum_probs=21.2

Q ss_pred             CCceEEEEechHHHHHHHHHhcCCC
Q psy463          583 KTRTAIWGWSYGGYATGLALALDPS  607 (790)
Q Consensus       583 ~~ri~i~G~S~GG~~a~~~a~~~p~  607 (790)
                      ..+|.++|||+||.+|..++.....
T Consensus        27 ~~~i~v~GHSlGg~lA~l~a~~~~~   51 (153)
T cd00741          27 DYKIHVTGHSLGGALAGLAGLDLRG   51 (153)
T ss_pred             CCeEEEEEcCHHHHHHHHHHHHHHh
Confidence            5799999999999999888776543

Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.

>KOG4328|consensus

Probab=91.93  E-value=8  Score=40.26  Aligned_cols=164  Identities=16%  Similarity=0.217  Sum_probs=94.3

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      .....++.+.++|... .++.++-++.   |-..|++++....++....+..|   +....++.+...++|..     .-
T Consensus       232 ~hs~~Vs~l~F~P~n~s~i~ssSyDGt---iR~~D~~~~i~e~v~s~~~d~~~---fs~~d~~~e~~~vl~~~-----~~  300 (498)
T KOG4328|consen  232 PHSGPVSGLKFSPANTSQIYSSSYDGT---IRLQDFEGNISEEVLSLDTDNIW---FSSLDFSAESRSVLFGD-----NV  300 (498)
T ss_pred             cCCccccceEecCCChhheeeeccCce---eeeeeecchhhHHHhhcCcccee---eeeccccCCCccEEEee-----cc
Confidence            3345577888999877 4444433222   88888888877666654333334   34778888887777433     23


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE-cCCCCCCcc-e
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN-IADPTATPE-C  400 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~-~  400 (790)
                      |        .+-++|+.++..    ....++.+...+.+ ++..|-..+++.++.-..  ...||-.. +.+   +.. .
T Consensus       301 G--------~f~~iD~R~~~s----~~~~~~lh~kKI~s-v~~NP~~p~~laT~s~D~--T~kIWD~R~l~~---K~sp~  362 (498)
T KOG4328|consen  301 G--------NFNVIDLRTDGS----EYENLRLHKKKITS-VALNPVCPWFLATASLDQ--TAKIWDLRQLRG---KASPF  362 (498)
T ss_pred             c--------ceEEEEeecCCc----cchhhhhhhcccce-eecCCCCchheeecccCc--ceeeeehhhhcC---CCCcc
Confidence            4        344556544320    14445544445554 788888776555544322  14566553 332   222 1


Q ss_pred             eeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                      |+.     ......+.++.|||++-.++.++....   |.++|.
T Consensus       363 lst-----~~HrrsV~sAyFSPs~gtl~TT~~D~~---IRv~ds  398 (498)
T KOG4328|consen  363 LST-----LPHRRSVNSAYFSPSGGTLLTTCQDNE---IRVFDS  398 (498)
T ss_pred             eec-----ccccceeeeeEEcCCCCceEeeccCCc---eEEeec
Confidence            221     225678889999999887766654443   556554

>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function

Probab=91.81  E-value=0.21  Score=46.97  Aligned_cols=70  Identities=14%  Similarity=-0.021  Sum_probs=46.0

Q ss_pred             eEEEEEcCCCCCCChhh-hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC
Q psy463          534 IVVAYIDGRNSALKGNT-LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD  605 (790)
Q Consensus       534 ~~v~~~d~rG~~~~g~~-~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~  605 (790)
                      ..|++|=||=....... .............+.|+.++.++.+++..  +...++|.|||.|+.+...++..+
T Consensus        46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~  116 (207)
T PF11288_consen   46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEE  116 (207)
T ss_pred             CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHH
Confidence            45788888754322211 01111112223568999999999888543  346899999999999999988764

>PRK13613 lipoprotein LpqB; Provisional

Probab=91.60  E-value=28  Score=39.34  Aligned_cols=169  Identities=13%  Similarity=0.127  Sum_probs=91.9

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-----eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-----DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-----~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      ...+++.|+||+.+++....  ...+++-++..+..     +.++...       ....|+|.++| ++. ++-  .+..
T Consensus       364 ~~~s~avS~~g~~~A~v~~~--~~~l~vg~~~~~~~~~~~~~~~~~~~-------~Lt~PS~d~~g-~vW-tvd--~~~~  430 (599)
T PRK13613        364 PLRRVAVSRDESRAAGISAD--GDSVYVGSLTPGASIGVHSWGVTADG-------RLTSPSWDGRG-DLW-VVD--RDPA  430 (599)
T ss_pred             CccceEEcCCCceEEEEcCC--CcEEEEeccCCCCccccccceeeccC-------cccCCcCcCCC-CEE-Eec--CCCC
Confidence            56789999999966666432  23577766544332     2333221       14579999988 565 332  0122


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC-CCCCc
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD-PTATP  398 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~  398 (790)
                      +      ...|.++. .+|+      ...+...   ...+.. +..|+||-++++....+..  .+|++--+.- .++. 
T Consensus       431 ~------~~vl~v~~-~~G~------~~~V~~~~l~g~~I~~-lrvSrDG~RvAvv~~~~g~--~~v~va~V~R~~~G~-  493 (599)
T PRK13613        431 D------PRLLWLLQ-GDGE------PVEVRTPELDGHRVVA-VRVARDGVRVALIVEKDGR--RSLQIGRIVRDAKAV-  493 (599)
T ss_pred             C------ceEEEEEc-CCCc------EEEeeccccCCCEeEE-EEECCCccEEEEEEecCCC--cEEEEEEEEeCCCCc-
Confidence            3      22344444 3444      3222221   113444 8899999999998765221  4555543321 1233 


Q ss_pred             ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          399 ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       399 ~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      ..|+.. ..+..+.....+++|..+++.++......+...++++.+++.
T Consensus       494 ~~l~~~-~~l~~~l~~v~~~~W~~~~sL~Vlg~~~~~~~~v~~v~vdG~  541 (599)
T PRK13613        494 VSVEEF-RSLAPELEDVTDMSWAGDSQLVVLGREEGGVQQARYVQVDGS  541 (599)
T ss_pred             EEeecc-EEeccCCCccceeEEcCCCEEEEEeccCCCCcceEEEecCCc
Confidence            445432 111112334678899999997776654444444777777764

>PRK13615 lipoprotein LpqB; Provisional

Probab=91.58  E-value=8.1  Score=42.86  Aligned_cols=99  Identities=16%  Similarity=0.194  Sum_probs=50.6

Q ss_pred             ceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC
Q psy463           11 SALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI   90 (790)
Q Consensus        11 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~   90 (790)
                      .+++.|+||+.+||+.. +  ..+ .+...|+...        .-+.-.......|..++  ..|+....+...+.. ..
T Consensus       337 ~s~avS~dg~~~A~v~~-~--~~l-~vg~~~~~~~--------~~~~~~~Lt~PS~d~~g--~vWtv~~g~~~~l~~-~~  401 (557)
T PRK13615        337 DAATLSADGRQAAVRNA-S--GVW-SVGDGDRDAV--------LLDTRPGLVAPSLDAQG--YVWSTPASDPRGLVA-WG  401 (557)
T ss_pred             ccceEcCCCceEEEEcC-C--ceE-EEecCCCcce--------eeccCCccccCcCcCCC--CEEEEeCCCceEEEE-ec
Confidence            57899999999999843 2  233 3333333211        00111123344565444  567766544333332 22


Q ss_pred             CCCeeeEEEeecCCCCccc--cCCccccccCCceEEEEeec
Q psy463           91 NEGTCDVVFSRDLDRGWFE--PFDHLRFSSDGKKMLLILSH  129 (790)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~--~~~~~~~spdg~~i~~~~~~  129 (790)
                      .+|....+   ..  -|..  .....+.|+||-+++.+.+.
T Consensus       402 ~~G~~~~v---~v--~~~~~~~I~~lrvSrDG~R~Avi~~~  437 (557)
T PRK13615        402 PDGVGHPV---AV--SWTATGRVVSLEVARDGARVLVQLET  437 (557)
T ss_pred             CCCceEEe---ec--cccCCCeeEEEEeCCCccEEEEEEec
Confidence            33433222   11  1221  22456889999999887653

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=91.48  E-value=6.8  Score=41.58  Aligned_cols=113  Identities=13%  Similarity=0.067  Sum_probs=57.6

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEE-ECCC-----CceeEEEEEeCCCc--ccccCCceeEccCCCEEEEEEccccc-
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRC-SINE-----GTCDVVFSRDLDRG--WFEPFDHLRFSSDGKKMLLILSHNQE-  320 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~-~~~~-----g~~~~l~~~~~~~~--~~~~~~~~~~spDg~~i~~~~~~~~~-  320 (790)
                      ..+.+.+||  ++.+...    .|+.+ +.++     ++.+.|...-....  ..+....+.|.|||+ |++....... 
T Consensus        75 ~Gi~~~~~G--lyV~~~~----~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~-LYv~~G~~~~~  147 (367)
T TIGR02604        75 TGLAVAVGG--VYVATPP----DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGW-LYFNHGNTLAS  147 (367)
T ss_pred             cceeEecCC--EEEeCCC----eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCC-EEEecccCCCc
Confidence            567788898  4444333    37766 3332     23444544322110  112245799999996 6654441000 


Q ss_pred             ---cCCC---CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEc
Q psy463          321 ---SDGS---TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLST  377 (790)
Q Consensus       321 ---~~g~---~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~  377 (790)
                         ..+.   ........+++++.++++      .+.+..+.....+ ++|+++|+ ++++.+
T Consensus       148 ~~~~~~~~~~~~~~~~g~i~r~~pdg~~------~e~~a~G~rnp~G-l~~d~~G~-l~~tdn  202 (367)
T TIGR02604       148 KVTRPGTSDESRQGLGGGLFRYNPDGGK------LRVVAHGFQNPYG-HSVDSWGD-VFFCDN  202 (367)
T ss_pred             eeccCCCccCcccccCceEEEEecCCCe------EEEEecCcCCCcc-ceECCCCC-EEEEcc
Confidence               0000   000001368899988876      6566554322223 78999886 555544

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG0288|consensus

Probab=91.45  E-value=1.9  Score=43.98  Aligned_cols=121  Identities=16%  Similarity=0.145  Sum_probs=70.5

Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc-
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP-  351 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~-  351 (790)
                      |-.+|..++.++......+      ...+...|+||..|. ..+    ++.        .|-++|+.+.+      +++ 
T Consensus       324 vRfwD~Rs~~~~~sv~~gg------~vtSl~ls~~g~~lL-sss----RDd--------tl~viDlRt~e------I~~~  378 (459)
T KOG0288|consen  324 VRFWDIRSADKTRSVPLGG------RVTSLDLSMDGLELL-SSS----RDD--------TLKVIDLRTKE------IRQT  378 (459)
T ss_pred             eEEEeccCCceeeEeecCc------ceeeEeeccCCeEEe-eec----CCC--------ceeeeeccccc------EEEE
Confidence            5566655555443332211      145788999999887 334    333        46788887766      443 


Q ss_pred             ccCCCe----EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEE
Q psy463          352 LTRGRF----TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYY  427 (790)
Q Consensus       352 lt~~~~----~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~  427 (790)
                      ++...+    +... ..||||+.+++--+.+     +.||+-++.+  ++.+.+-+.    .+.+..+.+.+|+|.|+.+
T Consensus       379 ~sA~g~k~asDwtr-vvfSpd~~YvaAGS~d-----gsv~iW~v~t--gKlE~~l~~----s~s~~aI~s~~W~~sG~~L  446 (459)
T KOG0288|consen  379 FSAEGFKCASDWTR-VVFSPDGSYVAAGSAD-----GSVYIWSVFT--GKLEKVLSL----STSNAAITSLSWNPSGSGL  446 (459)
T ss_pred             eeccccccccccce-eEECCCCceeeeccCC-----CcEEEEEccC--ceEEEEecc----CCCCcceEEEEEcCCCchh
Confidence            222111    1122 6789999977665555     4566666665  554443321    1122358889999999887


Q ss_pred             EEE
Q psy463          428 VLS  430 (790)
Q Consensus       428 ~~~  430 (790)
                      +..
T Consensus       447 lsa  449 (459)
T KOG0288|consen  447 LSA  449 (459)
T ss_pred             hcc
Confidence            543

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=91.43  E-value=17  Score=37.91  Aligned_cols=144  Identities=16%  Similarity=0.192  Sum_probs=65.6

Q ss_pred             CCCCEEEEEEEccC----Cc-EEEEEec----cCcceEEEEEECCCC-----ceeEEEEE-eCCCcccccCCceeEccCC
Q psy463          244 NVEPVLSRVNWANE----SV-VAAWVNR----VQNRARITRCSINEG-----TCDVVFSR-DLDRGWFEPFDHLRFSSDG  308 (790)
Q Consensus       244 ~~~~~~~~~~wspD----g~-~~~~~~r----~~~~~~i~~~~~~~g-----~~~~l~~~-~~~~~~~~~~~~~~~spDg  308 (790)
                      ........+++.|+    +. +++++..    .....+|.++....+     ..+.|... .......+....+.|.|||
T Consensus        46 ~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG  125 (331)
T PF07995_consen   46 DGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG  125 (331)
T ss_dssp             STTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS
T ss_pred             cccCCcccceeccccCCCCEEEEEEEcccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC
Confidence            44566778888885    56 6666643    123356777776654     22334332 2201111223468999999


Q ss_pred             CEEEEEEcccccc-CCCCCcCcccEEEEEEcCCCCcccCC-------CcccccCCCeEEeEEEeeecCCCEEEEEEcCCC
Q psy463          309 KKMLLILSHNQES-DGSTPVDSWDHLTFIDLDDQAGIKDK-------VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS  380 (790)
Q Consensus       309 ~~i~~~~~~~~~~-~g~~~~~~~~~l~~~d~~~~~~~~~~-------~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~  380 (790)
                       .|++........ ....+....-.|.+++.++.-...+.       .......|-....+ ++|+|....|+..-+...
T Consensus       126 -~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~~p~dnP~~~~~~~~~~i~A~GlRN~~~-~~~d~~tg~l~~~d~G~~  203 (331)
T PF07995_consen  126 -KLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGSIPADNPFVGDDGADSEIYAYGLRNPFG-LAFDPNTGRLWAADNGPD  203 (331)
T ss_dssp             -EEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSSB-TTSTTTTSTTSTTTEEEE--SEEEE-EEEETTTTEEEEEEE-SS
T ss_pred             -cEEEEeCCCCCcccccccccccceEEEecccCcCCCCCccccCCCceEEEEEeCCCcccc-EEEECCCCcEEEEccCCC
Confidence             577666521110 00001111447899997654100000       01122222222223 789998555666544321


Q ss_pred             CceEEEEEEE
Q psy463          381 PIVQHMYRIN  390 (790)
Q Consensus       381 ~~~~~l~~~~  390 (790)
                       ..-.|.++.
T Consensus       204 -~~dein~i~  212 (331)
T PF07995_consen  204 -GWDEINRIE  212 (331)
T ss_dssp             -SSEEEEEE-
T ss_pred             -CCcEEEEec
Confidence             124566554

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase

Probab=91.29  E-value=0.29  Score=44.87  Aligned_cols=69  Identities=22%  Similarity=0.211  Sum_probs=52.6

Q ss_pred             hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCC-ceEEEEcCCCCCcCC--C--cchHHHHHHHHHHHHh
Q psy463          720 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MFQSQTYPDEEHGLI--G--VRPHFYHTLERFLDSC  788 (790)
Q Consensus       720 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-~~~~~~~p~~~H~~~--~--~~~~~~~~i~~fl~~~  788 (790)
                      .+.|.++++|-|-|+.|.++.+.++....+.+..... ....++.||+||.-.  .  .+++++..|.+|+.++
T Consensus       129 p~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~  202 (202)
T PF06850_consen  129 PAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH  202 (202)
T ss_pred             hHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence            4456578899999999999999998887766554322 235667899999643  2  6789999999999864

This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.

>KOG1538|consensus

Probab=90.99  E-value=27  Score=38.42  Aligned_cols=59  Identities=8%  Similarity=0.138  Sum_probs=34.3

Q ss_pred             EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463          363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~  435 (790)
                      +++-++|.++..-+.++.   -++|.-+  +     .+|-.    ...-...+.++..-|++++++..+..-+
T Consensus       228 isYf~NGEy~LiGGsdk~---L~~fTR~--G-----vrLGT----vg~~D~WIWtV~~~PNsQ~v~~GCqDGT  286 (1081)
T KOG1538|consen  228 ISYFTNGEYILLGGSDKQ---LSLFTRD--G-----VRLGT----VGEQDSWIWTVQAKPNSQYVVVGCQDGT  286 (1081)
T ss_pred             heeccCCcEEEEccCCCc---eEEEeec--C-----eEEee----ccccceeEEEEEEccCCceEEEEEccCe
Confidence            456688888777655532   4555421  1     11111    0112346677889999999988876544

>KOG1063|consensus

Probab=90.90  E-value=2.3  Score=46.39  Aligned_cols=118  Identities=14%  Similarity=0.081  Sum_probs=64.4

Q ss_pred             EEEEEEccCCcEEEEEeccCc--ceEEEEEECCCCceeE-EEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          249 LSRVNWANESVVAAWVNRVQN--RARITRCSINEGTCDV-VFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~--~~~i~~~~~~~g~~~~-l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      +..++.||+|++++..-+.+.  ...|++.+..+-.... |-...     +. .....|||||+.|+ .++    ++.  
T Consensus       528 v~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~Hs-----LT-VT~l~FSpdg~~LL-svs----RDR--  594 (764)
T KOG1063|consen  528 VYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHS-----LT-VTRLAFSPDGRYLL-SVS----RDR--  594 (764)
T ss_pred             EEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccc-----eE-EEEEEECCCCcEEE-Eee----cCc--
Confidence            578999999998888776654  4567887766543322 22111     11 34789999999887 666    344  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~  390 (790)
                          ...||-.- ++...  ......+..+. .+...-.|+||++++ +++.+.  ....+|...
T Consensus       595 ----t~sl~~~~-~~~~~--e~~fa~~k~Ht-RIIWdcsW~pde~~F-aTaSRD--K~VkVW~~~  648 (764)
T KOG1063|consen  595 ----TVSLYEVQ-EDIKD--EFRFACLKAHT-RIIWDCSWSPDEKYF-ATASRD--KKVKVWEEP  648 (764)
T ss_pred             ----eEEeeeee-cccch--hhhhccccccc-eEEEEcccCccccee-EEecCC--ceEEEEecc
Confidence                22344331 11110  00011122222 344457899999973 333332  125566654

>KOG4547|consensus

Probab=90.79  E-value=13  Score=39.99  Aligned_cols=141  Identities=14%  Similarity=0.133  Sum_probs=76.9

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|+++++.+|+.     ...++.+               ...+....+.|+.+-..++....   ..++..++...+..
T Consensus        80 g~v~~ys~~~g~i-----t~~~st~---------------~h~~~v~~~~~~~~~~ciyS~~a---d~~v~~~~~~~~~~  136 (541)
T KOG4547|consen   80 GSVLLYSVAGGEI-----TAKLSTD---------------KHYGNVNEILDAQRLGCIYSVGA---DLKVVYILEKEKVI  136 (541)
T ss_pred             ccEEEEEecCCeE-----EEEEecC---------------CCCCcceeeecccccCceEecCC---ceeEEEEeccccee
Confidence            6888888888763     2233211               23344455555544443333322   22344555555554


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEE
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL  363 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~  363 (790)
                      .++......     ...+...+|||+.++ +++              .+|-++|.++++     ..+..|.+...+.. +
T Consensus       137 ~~~~~~~~~-----~~~sl~is~D~~~l~-~as--------------~~ik~~~~~~ke-----vv~~ftgh~s~v~t-~  190 (541)
T KOG4547|consen  137 IRIWKEQKP-----LVSSLCISPDGKILL-TAS--------------RQIKVLDIETKE-----VVITFTGHGSPVRT-L  190 (541)
T ss_pred             eeeeccCCC-----ccceEEEcCCCCEEE-ecc--------------ceEEEEEccCce-----EEEEecCCCcceEE-E
Confidence            444443221     156899999999776 444              379999999887     34556766555544 4


Q ss_pred             eeecC--CC-EEEEEEcCCCCceEEEEEEEcCC
Q psy463          364 AWDEK--EN-NVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       364 ~~s~d--g~-~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ++-.+  |- -.||.+.........++.+.-+.
T Consensus       191 ~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~  223 (541)
T KOG4547|consen  191 SFTTLIDGIIGKYVLSSAAAERGITVWVVEKED  223 (541)
T ss_pred             EEEEeccccccceeeeccccccceeEEEEEccc
Confidence            44333  22 13555555222225677776644

>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]

Probab=90.77  E-value=5.7  Score=41.03  Aligned_cols=69  Identities=14%  Similarity=0.108  Sum_probs=43.9

Q ss_pred             HHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC
Q psy463          526 LYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD  605 (790)
Q Consensus       526 ~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~  605 (790)
                      ...++++|+.|+-+|--.   |=++  ..    .......|+...+++...+   -...++.++|+|+|+-+-..+-.+-
T Consensus       280 ~~~l~~~gvpVvGvdsLR---YfW~--~r----tPe~~a~Dl~r~i~~y~~~---w~~~~~~liGySfGADvlP~~~n~L  347 (456)
T COG3946         280 AEALQKQGVPVVGVDSLR---YFWS--ER----TPEQIAADLSRLIRFYARR---WGAKRVLLIGYSFGADVLPFAYNRL  347 (456)
T ss_pred             HHHHHHCCCceeeeehhh---hhhc--cC----CHHHHHHHHHHHHHHHHHh---hCcceEEEEeecccchhhHHHHHhC
Confidence            345667999999998432   1111  11    1113467777777777663   3368999999999997766554433


Q ss_pred             C
Q psy463          606 P  606 (790)
Q Consensus       606 p  606 (790)
                      |
T Consensus       348 ~  348 (456)
T COG3946         348 P  348 (456)
T ss_pred             C
Confidence            3

>cd00519 Lipase_3 Lipase (class 3)

Probab=90.53  E-value=0.5  Score=46.36  Aligned_cols=52  Identities=13%  Similarity=0.049  Sum_probs=32.6

Q ss_pred             hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC----CCceEEEEEeCCC
Q psy463          565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP----SNVFKCGISVAPV  619 (790)
Q Consensus       565 ~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p----~~~~~~~v~~~~~  619 (790)
                      .++...++.+.++.+   ..+|.++|||+||.+|..++....    ...+.+....+|-
T Consensus       112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~  167 (229)
T cd00519         112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR  167 (229)
T ss_pred             HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence            344444554444223   468999999999999987766422    2345566655553

Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.

>KOG2111|consensus

Probab=90.45  E-value=20  Score=35.77  Aligned_cols=103  Identities=14%  Similarity=0.230  Sum_probs=66.0

Q ss_pred             EEEEEeccCcceEEEEEECCCCce---eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEE
Q psy463          260 VAAWVNRVQNRARITRCSINEGTC---DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFI  336 (790)
Q Consensus       260 ~~~~~~r~~~~~~i~~~~~~~g~~---~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~  336 (790)
                      ++++-.+..  .++-++|+..-+.   ..+-..+.      ...-.+.+-+|..++ +++    ..|       +-|.++
T Consensus       150 ~LafPg~k~--GqvQi~dL~~~~~~~p~~I~AH~s------~Iacv~Ln~~Gt~vA-TaS----tkG-------TLIRIF  209 (346)
T KOG2111|consen  150 LLAFPGFKT--GQVQIVDLASTKPNAPSIINAHDS------DIACVALNLQGTLVA-TAS----TKG-------TLIRIF  209 (346)
T ss_pred             EEEcCCCcc--ceEEEEEhhhcCcCCceEEEcccC------ceeEEEEcCCccEEE-Eec----cCc-------EEEEEE
Confidence            666654433  3477777765443   33333222      134678899999888 777    456       357778


Q ss_pred             EcCCCCcccCCCcccccCCCe--EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463          337 DLDDQAGIKDKVPVPLTRGRF--TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       337 d~~~~~~~~~~~~~~lt~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                      |..+|+     +...+..|..  ++.. +++|||+.+|+..++.|.   -|++.+.-
T Consensus       210 dt~~g~-----~l~E~RRG~d~A~iy~-iaFSp~~s~LavsSdKgT---lHiF~l~~  257 (346)
T KOG2111|consen  210 DTEDGT-----LLQELRRGVDRADIYC-IAFSPNSSWLAVSSDKGT---LHIFSLRD  257 (346)
T ss_pred             EcCCCc-----EeeeeecCCchheEEE-EEeCCCccEEEEEcCCCe---EEEEEeec
Confidence            888776     2444555532  2333 789999999999998866   78877654

>KOG0302|consensus

Probab=90.41  E-value=5.5  Score=40.33  Aligned_cols=156  Identities=12%  Similarity=0.221  Sum_probs=82.5

Q ss_pred             EEEEEcc--CCcEEEEEeccCcceEEEEEECCCCcee----EEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          250 SRVNWAN--ESVVAAWVNRVQNRARITRCSINEGTCD----VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       250 ~~~~wsp--Dg~~~~~~~r~~~~~~i~~~~~~~g~~~----~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ..+.|||  .|+++.    +.-...|++....+|...    .++..   +   ..+....|||..+.++++++    -+|
T Consensus       215 y~LdWSp~~~g~Lls----GDc~~~I~lw~~~~g~W~vd~~Pf~gH---~---~SVEDLqWSptE~~vfaScS----~Dg  280 (440)
T KOG0302|consen  215 YGLDWSPIKTGRLLS----GDCVKGIHLWEPSTGSWKVDQRPFTGH---T---KSVEDLQWSPTEDGVFASCS----CDG  280 (440)
T ss_pred             eeeeccccccccccc----CccccceEeeeeccCceeecCcccccc---c---cchhhhccCCccCceEEeee----cCc
Confidence            4678998  333221    112233666666655432    11111   1   12458999999999988887    667


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccC-CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc-CCCCCCccee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTR-GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI-ADPTATPECI  401 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~-~~~~~~~~~l  401 (790)
                              -|.++|...+.    ++...+++ ...++ ..++|+.+-..|++-+..|.   .+||-+.. ..  +++...
T Consensus       281 --------sIrIWDiRs~~----~~~~~~~kAh~sDV-NVISWnr~~~lLasG~DdGt---~~iwDLR~~~~--~~pVA~  342 (440)
T KOG0302|consen  281 --------SIRIWDIRSGP----KKAAVSTKAHNSDV-NVISWNRREPLLASGGDDGT---LSIWDLRQFKS--GQPVAT  342 (440)
T ss_pred             --------eEEEEEecCCC----ccceeEeeccCCce-eeEEccCCcceeeecCCCce---EEEEEhhhccC--CCccee
Confidence                    46777876653    01333333 23333 34889877664444333343   66665532 22  222111


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      ..      -....+.++.|+|....++......  .+|-+.|+.
T Consensus       343 fk------~Hk~pItsieW~p~e~s~iaasg~D--~QitiWDls  378 (440)
T KOG0302|consen  343 FK------YHKAPITSIEWHPHEDSVIAASGED--NQITIWDLS  378 (440)
T ss_pred             EE------eccCCeeEEEeccccCceEEeccCC--CcEEEEEee
Confidence            11      1456788899999876554433222  345555543

>KOG0268|consensus

Probab=90.33  E-value=1.5  Score=43.93  Aligned_cols=140  Identities=13%  Similarity=0.236  Sum_probs=78.4

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      .|+|--..|+-+...            -+.|.++|+-.+++    +.. +.-+  -=.|-..|+|..   ..|+..++. 
T Consensus       194 kfNpvETsILas~~s------------DrsIvLyD~R~~~P----l~K-Vi~~--mRTN~IswnPea---fnF~~a~ED-  250 (433)
T KOG0268|consen  194 KFNPVETSILASCAS------------DRSIVLYDLRQASP----LKK-VILT--MRTNTICWNPEA---FNFVAANED-  250 (433)
T ss_pred             ecCCCcchheeeecc------------CCceEEEecccCCc----cce-eeee--ccccceecCccc---cceeecccc-
Confidence            556666666544422            23799999866542    111 1000  001224677732   566665432 


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARI  273 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i  273 (790)
                               ..||.+|...-+.     |..+-.                +.-.-+..+.+||-|+ ++.-+-...    |
T Consensus       251 ---------~nlY~~DmR~l~~-----p~~v~~----------------dhvsAV~dVdfsptG~EfvsgsyDks----I  296 (433)
T KOG0268|consen  251 ---------HNLYTYDMRNLSR-----PLNVHK----------------DHVSAVMDVDFSPTGQEFVSGSYDKS----I  296 (433)
T ss_pred             ---------ccceehhhhhhcc-----cchhhc----------------ccceeEEEeccCCCcchhccccccce----E
Confidence                     6889988654211     333321                2233467899999999 554332222    7


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      -++....+..+.++....    ........||.|.++|+ ..|
T Consensus       297 RIf~~~~~~SRdiYhtkR----Mq~V~~Vk~S~Dskyi~-SGS  334 (433)
T KOG0268|consen  297 RIFPVNHGHSRDIYHTKR----MQHVFCVKYSMDSKYII-SGS  334 (433)
T ss_pred             EEeecCCCcchhhhhHhh----hheeeEEEEeccccEEE-ecC
Confidence            777777777766554321    11244789999999776 666

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=90.32  E-value=20  Score=35.36  Aligned_cols=205  Identities=15%  Similarity=0.214  Sum_probs=91.8

Q ss_pred             CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ...++.++|.||.+ +.+..+.   ...|+.++.++.-.+.+.- .   ++.+ ...+.+.-+|+ ++ ++.   |+.+ 
T Consensus        21 ~~e~SGLTy~pd~~tLfaV~d~---~~~i~els~~G~vlr~i~l-~---g~~D-~EgI~y~g~~~-~v-l~~---Er~~-   86 (248)
T PF06977_consen   21 LDELSGLTYNPDTGTLFAVQDE---PGEIYELSLDGKVLRRIPL-D---GFGD-YEGITYLGNGR-YV-LSE---ERDQ-   86 (248)
T ss_dssp             -S-EEEEEEETTTTEEEEEETT---TTEEEEEETT--EEEEEE--S---S-SS-EEEEEE-STTE-EE-EEE---TTTT-
T ss_pred             cCCccccEEcCCCCeEEEEECC---CCEEEEEcCCCCEEEEEeC-C---CCCC-ceeEEEECCCE-EE-EEE---cCCC-
Confidence            33478999999987 5555544   2348999986443343322 1   1212 44788887775 33 455   4555 


Q ss_pred             CCcCcccEEEEEEcCCCCc-ccCCCccccc-----CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc
Q psy463          325 TPVDSWDHLTFIDLDDQAG-IKDKVPVPLT-----RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP  398 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~-~~~~~~~~lt-----~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~  398 (790)
                             .|++++++.... ......+.++     .+.....+ ++|++.++.+++.-. ..|  ..||.++........
T Consensus        87 -------~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EG-la~D~~~~~L~v~kE-~~P--~~l~~~~~~~~~~~~  155 (248)
T PF06977_consen   87 -------RLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEG-LAYDPKTNRLFVAKE-RKP--KRLYEVNGFPGGFDL  155 (248)
T ss_dssp             -------EEEEEEE----TT--EEEEEEEE---S---SS--EE-EEEETTTTEEEEEEE-SSS--EEEEEEESTT-SS--
T ss_pred             -------cEEEEEEeccccccchhhceEEecccccCCCcceEE-EEEcCCCCEEEEEeC-CCC--hhhEEEccccCccce
Confidence                   788888743221 0100111222     12223455 899999998887643 344  789988862100111


Q ss_pred             ceeee-cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEc
Q psy463          399 ECITC-DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPI  477 (790)
Q Consensus       399 ~~lt~-~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  477 (790)
                      ..... .+..........+.+.+.|....++.-.  ...+.|..+|.+++....+.......  --...++++|-+++..
T Consensus       156 ~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS--~es~~l~~~d~~G~~~~~~~L~~g~~--gl~~~~~QpEGIa~d~  231 (248)
T PF06977_consen  156 FVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILS--DESRLLLELDRQGRVVSSLSLDRGFH--GLSKDIPQPEGIAFDP  231 (248)
T ss_dssp             EEEE-HHHH-HT--SS---EEEEETTTTEEEEEE--TTTTEEEEE-TT--EEEEEE-STTGG--G-SS---SEEEEEE-T
T ss_pred             eeccccccccccceeccccceEEcCCCCeEEEEE--CCCCeEEEECCCCCEEEEEEeCCccc--CcccccCCccEEEECC
Confidence            10000 0000000123566778888755443332  22355777787665433332221110  0123567788888875


Q ss_pred             CCC
Q psy463          478 QPN  480 (790)
Q Consensus       478 ~dg  480 (790)
                       +|
T Consensus       232 -~G  233 (248)
T PF06977_consen  232 -DG  233 (248)
T ss_dssp             -T-
T ss_pred             -CC
Confidence             44

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PRK13614 lipoprotein LpqB; Provisional

Probab=90.19  E-value=8.8  Score=42.76  Aligned_cols=107  Identities=18%  Similarity=0.274  Sum_probs=53.5

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccc-eeEEEEe
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQN-RARITRC   88 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~-~~~~~~~   88 (790)
                      ..+++.|+||+.+||+..  ....++.... |+...        .-++-.......|..++  ..|+....+ ...+..-
T Consensus       345 ~~s~avS~~g~~~A~~~~--~~~~l~~~~~-g~~~~--------~~~~g~~Lt~PS~d~~g--~vWtv~~g~~~~vv~~~  411 (573)
T PRK13614        345 PASPAESPVSQTVAFLNG--SRTTLYTVSP-GQPAR--------ALTSGSTLTRPSFSPQD--WVWTAGPGGNGRIVAYR  411 (573)
T ss_pred             ccceeecCCCceEEEecC--CCcEEEEecC-CCcce--------eeecCCCccCCcccCCC--CEEEeeCCCCceEEEEe
Confidence            457899999999999843  2246676665 33210        01111123344565444  567765533 2222222


Q ss_pred             eCCCCeeeEEEeecCCCCcccc--CCccccccCCceEEEEeec
Q psy463           89 SINEGTCDVVFSRDLDRGWFEP--FDHLRFSSDGKKMLLILSH  129 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~spdg~~i~~~~~~  129 (790)
                      ...++...........-.|+..  ....+.|+||-+++.+.+.
T Consensus       412 ~~g~~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~  454 (573)
T PRK13614        412 PTGVAEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQ  454 (573)
T ss_pred             cCCCcccccccceeecccccCCCeeEEEEECCCccEEEEEEEe
Confidence            2112221111111111125432  3456889999998887753

>KOG0303|consensus

Probab=90.01  E-value=25  Score=36.11  Aligned_cols=131  Identities=10%  Similarity=0.111  Sum_probs=75.3

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..+.+.++++|+.     ...|                  ..+..+.+.+|+-||.++..+.++.   .|-++|..+|+.
T Consensus       154 n~v~iWnv~tgea-----li~l------------------~hpd~i~S~sfn~dGs~l~TtckDK---kvRv~dpr~~~~  207 (472)
T KOG0303|consen  154 NTVSIWNVGTGEA-----LITL------------------DHPDMVYSMSFNRDGSLLCTTCKDK---KVRVIDPRRGTV  207 (472)
T ss_pred             ceEEEEeccCCce-----eeec------------------CCCCeEEEEEeccCCceeeeecccc---eeEEEcCCCCcE
Confidence            5777888888863     1222                  3456778999999999766665543   288899888765


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEE
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL  363 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~  363 (790)
                      ..--  ....+-.  .....|-.+|+ |+ +...  .+-.      ..++.++|.+.=++  ......|.... .+. .+
T Consensus       208 v~e~--~~heG~k--~~Raifl~~g~-i~-tTGf--sr~s------eRq~aLwdp~nl~e--P~~~~elDtSn-Gvl-~P  269 (472)
T KOG0303|consen  208 VSEG--VAHEGAK--PARAIFLASGK-IF-TTGF--SRMS------ERQIALWDPNNLEE--PIALQELDTSN-GVL-LP  269 (472)
T ss_pred             eeec--ccccCCC--cceeEEeccCc-ee-eecc--cccc------ccceeccCcccccC--cceeEEeccCC-ceE-Ee
Confidence            4222  1111111  23578888998 54 4432  1223      45778887654220  00011222222 222 37


Q ss_pred             eeecCCCEEEEEEcC
Q psy463          364 AWDEKENNVYFLSTQ  378 (790)
Q Consensus       364 ~~s~dg~~l~~~~~~  378 (790)
                      -|++|.+.||..+-.
T Consensus       270 FyD~dt~ivYl~GKG  284 (472)
T KOG0303|consen  270 FYDPDTSIVYLCGKG  284 (472)
T ss_pred             eecCCCCEEEEEecC
Confidence            899999877766544

>KOG0290|consensus

Probab=90.00  E-value=21  Score=35.13  Aligned_cols=159  Identities=8%  Similarity=0.113  Sum_probs=81.5

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ..+..+..++|+.+|+-++.+-...+-  +.+.|+..-+-..+..+....  ..+--..+|++..-.+.-+..    .++
T Consensus       194 AHDKEV~DIaf~~~s~~~FASvgaDGS--vRmFDLR~leHSTIIYE~p~~--~~pLlRLswnkqDpnymATf~----~dS  265 (364)
T KOG0290|consen  194 AHDKEVYDIAFLKGSRDVFASVGADGS--VRMFDLRSLEHSTIIYEDPSP--STPLLRLSWNKQDPNYMATFA----MDS  265 (364)
T ss_pred             ecCcceeEEEeccCccceEEEecCCCc--EEEEEecccccceEEecCCCC--CCcceeeccCcCCchHHhhhh----cCC
Confidence            566778889999988833333222222  666777766555554443210  011123455554433221222    122


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCC--Cccee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTA--TPECI  401 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~--~~~~l  401 (790)
                             .++.++|+.--.+    ....|..+...+.+ ++|.|-.+..+-++.+..    +...-++..-..  ....+
T Consensus       266 -------~~V~iLDiR~P~t----pva~L~~H~a~VNg-IaWaPhS~~hictaGDD~----qaliWDl~q~~~~~~~dPi  329 (364)
T KOG0290|consen  266 -------NKVVILDIRVPCT----PVARLRNHQASVNG-IAWAPHSSSHICTAGDDC----QALIWDLQQMPRENGEDPI  329 (364)
T ss_pred             -------ceEEEEEecCCCc----ceehhhcCcccccc-eEecCCCCceeeecCCcc----eEEEEecccccccCCCCch
Confidence                   4677888753210    14567666666766 899999887766665532    333334332101  11111


Q ss_pred             eecccccCCCcccEEEEEEecC-CcEEEEEe
Q psy463          402 TCDLLTSANQKCSYSGATFSTN-VSYYVLSC  431 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~d-g~~~~~~~  431 (790)
                      ..   -  .....+..+.||+. ..+|+..+
T Consensus       330 la---y--~a~~EVNqi~Ws~~~~Dwiai~~  355 (364)
T KOG0290|consen  330 LA---Y--TAGGEVNQIQWSSSQPDWIAICF  355 (364)
T ss_pred             hh---h--hccceeeeeeecccCCCEEEEEe
Confidence            10   0  03456778888854 55665543

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=89.93  E-value=10  Score=40.18  Aligned_cols=56  Identities=14%  Similarity=0.200  Sum_probs=35.3

Q ss_pred             EEeeecCCCEEEEEEcCC-C--------------CceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcE
Q psy463          362 ILAWDEKENNVYFLSTQG-S--------------PIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSY  426 (790)
Q Consensus       362 ~~~~s~dg~~l~~~~~~~-~--------------~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~  426 (790)
                      .+.|.|||+ ||+..... .              +....+++++.++  ++.+.+..       +...-..+.|+++|+.
T Consensus       128 ~l~~gpDG~-LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg--~~~e~~a~-------G~rnp~Gl~~d~~G~l  197 (367)
T TIGR02604       128 SLAWGPDGW-LYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDG--GKLRVVAH-------GFQNPYGHSVDSWGDV  197 (367)
T ss_pred             CceECCCCC-EEEecccCCCceeccCCCccCcccccCceEEEEecCC--CeEEEEec-------CcCCCccceECCCCCE
Confidence            378999986 87754421 0              0124688888877  55555544       3334456889999876


Q ss_pred             E
Q psy463          427 Y  427 (790)
Q Consensus       427 ~  427 (790)
                      +
T Consensus       198 ~  198 (367)
T TIGR02604       198 F  198 (367)
T ss_pred             E
Confidence            5

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.91  E-value=5.4  Score=39.33  Aligned_cols=122  Identities=13%  Similarity=0.249  Sum_probs=70.1

Q ss_pred             CCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          245 VEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       245 ~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ....++..+|+||.+ +.+..+.+   +.|.-++.++.-.+.+.-..    ..+ ...+.|.-+|+..  ++.   |++.
T Consensus        84 ~~~nvS~LTynp~~rtLFav~n~p---~~iVElt~~GdlirtiPL~g----~~D-pE~Ieyig~n~fv--i~d---ER~~  150 (316)
T COG3204          84 ETANVSSLTYNPDTRTLFAVTNKP---AAIVELTKEGDLIRTIPLTG----FSD-PETIEYIGGNQFV--IVD---ERDR  150 (316)
T ss_pred             ccccccceeeCCCcceEEEecCCC---ceEEEEecCCceEEEecccc----cCC-hhHeEEecCCEEE--EEe---hhcc
Confidence            334478999999999 44444433   34888887766555543321    111 3467888888643  344   4555


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCC-----CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-----RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                              .|+.+-++.+.+....+...++-+     .....+ ++|+|..+.++|.-.+. |  ..||.+..
T Consensus       151 --------~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEG-lA~d~~~~~l~~aKEr~-P--~~I~~~~~  211 (316)
T COG3204         151 --------ALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEG-LAWDPVDHRLFVAKERN-P--IGIFEVTQ  211 (316)
T ss_pred             --------eEEEEEEcCCccEEeccceEEeccccCCCCcCcee-eecCCCCceEEEEEccC-C--cEEEEEec
Confidence                    566665554432111111112111     223345 89999999888876553 4  78888874

>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]

Probab=89.82  E-value=0.81  Score=48.61  Aligned_cols=104  Identities=17%  Similarity=0.200  Sum_probs=54.9

Q ss_pred             CCCCccEEEEEcCCCCcccccccccc--------c----h--HHHHHhcCCeEEEEEcCC-CCCCChhhhHhhhhccCCc
Q psy463          497 GHKKYPLLIHVYGGPSSFQVTERFSV--------D----W--NLYLADNKDIVVAYIDGR-NSALKGNTLKYAGYRRLGT  561 (790)
Q Consensus       497 ~~~~~p~vv~~HG~~~~~~~~~~~~~--------~----~--~~~~~~~~G~~v~~~d~r-G~~~~g~~~~~~~~~~~~~  561 (790)
                      ...+.|+++++-||||+..+.-.+..        .    .  ...-+-. --.++.+|++ |.|.+ .+.......+. .
T Consensus        97 dp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGfS-~a~~~e~~~d~-~  173 (498)
T COG2939          97 DPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGFS-RALGDEKKKDF-E  173 (498)
T ss_pred             CCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCcc-cccccccccch-h
Confidence            45678999999999998554222210        0    0  0111111 1247888844 55542 22111111111 1


Q ss_pred             cchhHHHHHHHHHHHhCCCcCC--CceEEEEechHHHHHHHHHh
Q psy463          562 VEIYDQINVTRYLQENLPYIDK--TRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       562 ~~~~D~~~~~~~l~~~~~~~d~--~ri~i~G~S~GG~~a~~~a~  603 (790)
                      ..-.|+....+.+.+.++...+  ++.+|+|-||||.-+..+|.
T Consensus       174 ~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~  217 (498)
T COG2939         174 GAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAH  217 (498)
T ss_pred             ccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHH
Confidence            2245666666655544333333  48999999999987765553

>KOG1408|consensus

Probab=89.75  E-value=25  Score=39.04  Aligned_cols=115  Identities=17%  Similarity=0.172  Sum_probs=72.0

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC-cccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR-GWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~-~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      +.....-|..+++...-.+.+   |-+++.++|+.+++++...+. +-   .--....|.|-+|+-..+           
T Consensus       599 lYDm~Vdp~~k~v~t~cQDrn---irif~i~sgKq~k~FKgs~~~eG~---lIKv~lDPSgiY~atScs-----------  661 (1080)
T KOG1408|consen  599 LYDMAVDPTSKLVVTVCQDRN---IRIFDIESGKQVKSFKGSRDHEGD---LIKVILDPSGIYLATSCS-----------  661 (1080)
T ss_pred             EEEeeeCCCcceEEEEecccc---eEEEeccccceeeeecccccCCCc---eEEEEECCCccEEEEeec-----------
Confidence            445556677774433322211   888999999988888753221 10   002345666766663333           


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                        ...|.++|.-+|+     ...+.+.+.-.+.+ +-|.+|-|.|+-.+.++-   .-+|+++.
T Consensus       662 --dktl~~~Df~sgE-----cvA~m~GHsE~VTG-~kF~nDCkHlISvsgDgC---IFvW~lp~  714 (1080)
T KOG1408|consen  662 --DKTLCFVDFVSGE-----CVAQMTGHSEAVTG-VKFLNDCKHLISVSGDGC---IFVWKLPL  714 (1080)
T ss_pred             --CCceEEEEeccch-----hhhhhcCcchheee-eeecccchhheeecCCce---EEEEECch
Confidence              2368999998888     56677766655666 779999998877776643   55665544

>PRK10252 entF enterobactin synthase subunit F; Provisional

Probab=89.59  E-value=0.9  Score=57.63  Aligned_cols=98  Identities=11%  Similarity=-0.054  Sum_probs=57.6

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |.++++||.++..   ..|.  .....+. .++.|+.++.+|.+... .         ....++++.+.+...+....  
T Consensus      1069 ~~l~~lh~~~g~~---~~~~--~l~~~l~-~~~~v~~~~~~g~~~~~-~---------~~~~l~~la~~~~~~i~~~~-- 1130 (1296)
T PRK10252       1069 PTLFCFHPASGFA---WQFS--VLSRYLD-PQWSIYGIQSPRPDGPM-Q---------TATSLDEVCEAHLATLLEQQ-- 1130 (1296)
T ss_pred             CCeEEecCCCCch---HHHH--HHHHhcC-CCCcEEEEECCCCCCCC-C---------CCCCHHHHHHHHHHHHHhhC--
Confidence            5688999987762   1222  1222333 47899999998865321 0         01234444443333332111  


Q ss_pred             CCCceEEEEechHHHHHHHHHhc---CCCCceEEEEEeCC
Q psy463          582 DKTRTAIWGWSYGGYATGLALAL---DPSNVFKCGISVAP  618 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~---~p~~~~~~~v~~~~  618 (790)
                      ...++.++||||||.++..++.+   .+ ..+..++...+
T Consensus      1131 ~~~p~~l~G~S~Gg~vA~e~A~~l~~~~-~~v~~l~l~~~ 1169 (1296)
T PRK10252       1131 PHGPYHLLGYSLGGTLAQGIAARLRARG-EEVAFLGLLDT 1169 (1296)
T ss_pred             CCCCEEEEEechhhHHHHHHHHHHHHcC-CceeEEEEecC
Confidence            12579999999999999998875   33 35555555544

>KOG1523|consensus

Probab=89.53  E-value=24  Score=35.22  Aligned_cols=26  Identities=8%  Similarity=0.220  Sum_probs=20.9

Q ss_pred             EeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          363 LAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ..|+|+|..|++.+.+     .-+..++..+
T Consensus       212 v~fs~sG~~lawv~Hd-----s~v~~~da~~  237 (361)
T KOG1523|consen  212 VLFSPSGNRLAWVGHD-----STVSFVDAAG  237 (361)
T ss_pred             eEeCCCCCEeeEecCC-----CceEEeecCC
Confidence            7899999999999877     4566677655

>PRK13615 lipoprotein LpqB; Provisional

Probab=89.46  E-value=27  Score=38.94  Aligned_cols=165  Identities=13%  Similarity=0.064  Sum_probs=89.1

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      ...++.|+||+.+++.+...   .+++-.. ++..+.+.....       ...|+|.++| ++. ++.     +|.    
T Consensus       336 ~~s~avS~dg~~~A~v~~~~---~l~vg~~-~~~~~~~~~~~~-------Lt~PS~d~~g-~vW-tv~-----~g~----  393 (557)
T PRK13615        336 ADAATLSADGRQAAVRNASG---VWSVGDG-DRDAVLLDTRPG-------LVAPSLDAQG-YVW-STP-----ASD----  393 (557)
T ss_pred             cccceEcCCCceEEEEcCCc---eEEEecC-CCcceeeccCCc-------cccCcCcCCC-CEE-EEe-----CCC----
Confidence            36789999999766665432   3444433 244444433211       3479999998 565 332     331    


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee-eec
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI-TCD  404 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l-t~~  404 (790)
                       ...+.... .+|+      ...+...   ...+. .+..|+||-++++....+..  .+|++..+.-..+.++.| +..
T Consensus       394 -~~~l~~~~-~~G~------~~~v~v~~~~~~~I~-~lrvSrDG~R~Avi~~~~g~--~~V~va~V~R~~~~P~~L~~~p  462 (557)
T PRK13615        394 -PRGLVAWG-PDGV------GHPVAVSWTATGRVV-SLEVARDGARVLVQLETGAG--PQLLVASIVRDGGVPTSLTTTP  462 (557)
T ss_pred             -ceEEEEec-CCCc------eEEeeccccCCCeeE-EEEeCCCccEEEEEEecCCC--CEEEEEEEEeCCCcceEeeecc
Confidence             22333322 2333      2222111   11344 38899999999998765221  455553321112556666 432


Q ss_pred             ccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          405 LLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       405 ~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      + .+..+.....++.|..+++..+......+..+++++.+.+.
T Consensus       463 ~-~l~~~l~~v~sl~W~~~~~laVl~~~~~~~~~v~~v~v~g~  504 (557)
T PRK13615        463 L-ELLASPGTPLDATWVDELDVATLTLAPDGERQVELHQVGGP  504 (557)
T ss_pred             E-EcccCcCcceeeEEcCCCEEEEEeccCCCCceEEEEECCCc
Confidence            1 11112336678899999997777643333566777777653

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=89.38  E-value=30  Score=36.06  Aligned_cols=173  Identities=17%  Similarity=0.174  Sum_probs=78.0

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCce-eEEEEEeCC-CcccccCCceeEccC---CCEEEEEEccccccCCC
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTC-DVVFSRDLD-RGWFEPFDHLRFSSD---GKKMLLILSHNQESDGS  324 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~-~~~~~~~~~~~~spD---g~~i~~~~~~~~~~~g~  324 (790)
                      ..++|.|||+++.. .+..   .|++++ ..|.. ..+...... .........+++.|+   ...||+..+......+ 
T Consensus         5 ~~~a~~pdG~l~v~-e~~G---~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~-   78 (331)
T PF07995_consen    5 RSMAFLPDGRLLVA-ERSG---RIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG-   78 (331)
T ss_dssp             EEEEEETTSCEEEE-ETTT---EEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS-
T ss_pred             eEEEEeCCCcEEEE-eCCc---eEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC-
Confidence            36789999985443 3322   388888 44443 444443210 001111235667774   3445544431100111 


Q ss_pred             CCcCcccEEEEEEcCCCCc-ccCCCcccc----cC--CCeEEeEEEeeecCCCEEEEEEcC-CC--------CceEEEEE
Q psy463          325 TPVDSWDHLTFIDLDDQAG-IKDKVPVPL----TR--GRFTVTEILAWDEKENNVYFLSTQ-GS--------PIVQHMYR  388 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~-~~~~~~~~l----t~--~~~~~~~~~~~s~dg~~l~~~~~~-~~--------~~~~~l~~  388 (790)
                         .....|.++....+.. ..  ..+.|    ..  ........+.|.||| .||+.... ..        .....|++
T Consensus        79 ---~~~~~v~r~~~~~~~~~~~--~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~~~~~~~~~~~~~~G~ilr  152 (331)
T PF07995_consen   79 ---DNDNRVVRFTLSDGDGDLS--SEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDGGNDDNAQDPNSLRGKILR  152 (331)
T ss_dssp             ---SEEEEEEEEEEETTSCEEE--EEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-TTTGGGGCSTTSSTTEEEE
T ss_pred             ---CcceeeEEEeccCCccccc--cceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCCCCcccccccccccceEEE
Confidence               1134677666654310 00  01111    11  122223348899999 68887654 11        12357889


Q ss_pred             EEcCCCC-----------CCcceeeecccccCCCcccEEEEEEecC-CcEEEEEeecCC-CCeEEEE
Q psy463          389 INIADPT-----------ATPECITCDLLTSANQKCSYSGATFSTN-VSYYVLSCIGPG-IPEIMLF  442 (790)
Q Consensus       389 ~~~~~~~-----------~~~~~lt~~~~~~~~~~~~~~~~~~s~d-g~~~~~~~~~~~-~~~i~~~  442 (790)
                      ++.++..           ...+..+.       +-......+|.|. |+.+ ....+++ .-+|.++
T Consensus       153 i~~dG~~p~dnP~~~~~~~~~~i~A~-------GlRN~~~~~~d~~tg~l~-~~d~G~~~~dein~i  211 (331)
T PF07995_consen  153 IDPDGSIPADNPFVGDDGADSEIYAY-------GLRNPFGLAFDPNTGRLW-AADNGPDGWDEINRI  211 (331)
T ss_dssp             EETTSSB-TTSTTTTSTTSTTTEEEE---------SEEEEEEEETTTTEEE-EEEE-SSSSEEEEEE
T ss_pred             ecccCcCCCCCccccCCCceEEEEEe-------CCCccccEEEECCCCcEE-EEccCCCCCcEEEEe
Confidence            9876520           01122222       3345567889998 5544 4445554 4444443

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG4283|consensus

Probab=89.26  E-value=12  Score=36.62  Aligned_cols=154  Identities=12%  Similarity=0.131  Sum_probs=90.0

Q ss_pred             CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCE-EEEEEccccccCC
Q psy463          246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKK-MLLILSHNQESDG  323 (790)
Q Consensus       246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~-i~~~~~~~~~~~g  323 (790)
                      ...+..+.|-|=.. .....+-+.   .+.+.|.++-+....+.-++.      ....+|||=... -.+.+.    ..+
T Consensus       101 ky~iss~~WyP~DtGmFtssSFDh---tlKVWDtnTlQ~a~~F~me~~------VYshamSp~a~sHcLiA~g----tr~  167 (397)
T KOG4283|consen  101 KYAISSAIWYPIDTGMFTSSSFDH---TLKVWDTNTLQEAVDFKMEGK------VYSHAMSPMAMSHCLIAAG----TRD  167 (397)
T ss_pred             eeeeeeeEEeeecCceeecccccc---eEEEeecccceeeEEeecCce------eehhhcChhhhcceEEEEe----cCC
Confidence            44578899999666 433333332   278888887666555554331      446788886542 221222    122


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                             .++-+-|+.+|.     ....|..+..++.. ..|+|...+|.+++....  ..+||-+.-.+  +-..+|-.
T Consensus       168 -------~~VrLCDi~SGs-----~sH~LsGHr~~vla-V~Wsp~~e~vLatgsaDg--~irlWDiRras--gcf~~lD~  230 (397)
T KOG4283|consen  168 -------VQVRLCDIASGS-----FSHTLSGHRDGVLA-VEWSPSSEWVLATGSADG--AIRLWDIRRAS--GCFRVLDQ  230 (397)
T ss_pred             -------CcEEEEeccCCc-----ceeeeccccCceEE-EEeccCceeEEEecCCCc--eEEEEEeeccc--ceeEEeec
Confidence                   368888998887     24456666656655 899999998888776522  26677665443  21111111


Q ss_pred             c-------ccccCCCcccEEEEEEecCCcEEEE
Q psy463          404 D-------LLTSANQKCSYSGATFSTNVSYYVL  429 (790)
Q Consensus       404 ~-------~~~~~~~~~~~~~~~~s~dg~~~~~  429 (790)
                      .       +.+-....+-+.+.+|+.||.+++.
T Consensus       231 hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~  263 (397)
T KOG4283|consen  231 HNTKRPPILKTNTAHYGKVNGLAWTSDARYLAS  263 (397)
T ss_pred             ccCccCccccccccccceeeeeeecccchhhhh
Confidence            0       0001113456778899999987754

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=89.22  E-value=24  Score=34.77  Aligned_cols=198  Identities=12%  Similarity=0.168  Sum_probs=88.3

Q ss_pred             EeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEE
Q psy463          175 LAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNW  254 (790)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~w  254 (790)
                      +.|+++++. ++.+...           ...|+.+++++.-.++    ..+.                  ..+-...+++
T Consensus        27 LTy~pd~~t-LfaV~d~-----------~~~i~els~~G~vlr~----i~l~------------------g~~D~EgI~y   72 (248)
T PF06977_consen   27 LTYNPDTGT-LFAVQDE-----------PGEIYELSLDGKVLRR----IPLD------------------GFGDYEGITY   72 (248)
T ss_dssp             EEEETTTTE-EEEEETT-----------TTEEEEEETT--EEEE----EE-S------------------S-SSEEEEEE
T ss_pred             cEEcCCCCe-EEEEECC-----------CCEEEEEcCCCCEEEE----EeCC------------------CCCCceeEEE
Confidence            578887664 5554432           2688989886432111    1111                  2233456788


Q ss_pred             ccCCcEEEEEeccCcceEEEEEECC--CCce--e---EEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          255 ANESVVAAWVNRVQNRARITRCSIN--EGTC--D---VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       255 spDg~~~~~~~r~~~~~~i~~~~~~--~g~~--~---~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      .-+|+++....|.+   +|+++++.  +...  .   .+.-.....+- ......+|.|.++.|++ +.   ++.     
T Consensus        73 ~g~~~~vl~~Er~~---~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N-~G~EGla~D~~~~~L~v-~k---E~~-----  139 (248)
T PF06977_consen   73 LGNGRYVLSEERDQ---RLYIFTIDDDTTSLDRADVQKISLGFPNKGN-KGFEGLAYDPKTNRLFV-AK---ERK-----  139 (248)
T ss_dssp             -STTEEEEEETTTT---EEEEEEE----TT--EEEEEEEE---S---S-S--EEEEEETTTTEEEE-EE---ESS-----
T ss_pred             ECCCEEEEEEcCCC---cEEEEEEeccccccchhhceEEecccccCCC-cceEEEEEcCCCCEEEE-Ee---CCC-----
Confidence            88888666665543   36666653  2221  1   11111000000 01457999999999884 43   232     


Q ss_pred             CcccEEEEEEc--CCCCcccCCCcccccCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce--
Q psy463          328 DSWDHLTFIDL--DDQAGIKDKVPVPLTRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC--  400 (790)
Q Consensus       328 ~~~~~l~~~d~--~~~~~~~~~~~~~lt~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~--  400 (790)
                        ...||-++.  .... ........+...   -.+.++ ++++|....++..+...    ..|..++.++   ++..  
T Consensus       140 --P~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~S~-l~~~p~t~~lliLS~es----~~l~~~d~~G---~~~~~~  208 (248)
T PF06977_consen  140 --PKRLYEVNGFPGGFD-LFVSDDQDLDDDKLFVRDLSG-LSYDPRTGHLLILSDES----RLLLELDRQG---RVVSSL  208 (248)
T ss_dssp             --SEEEEEEESTT-SS---EEEE-HHHH-HT--SS---E-EEEETTTTEEEEEETTT----TEEEEE-TT-----EEEEE
T ss_pred             --ChhhEEEccccCccc-eeeccccccccccceeccccc-eEEcCCCCeEEEEECCC----CeEEEECCCC---CEEEEE
Confidence              235777765  1111 000000011100   112333 77899988999998774    4677777655   3222  


Q ss_pred             -eeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          401 -ITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       401 -lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                       |......+...-.....+++.++|+.++.+
T Consensus       209 ~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs  239 (248)
T PF06977_consen  209 SLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS  239 (248)
T ss_dssp             E-STTGGG-SS---SEEEEEE-TT--EEEEE
T ss_pred             EeCCcccCcccccCCccEEEECCCCCEEEEc
Confidence             221100000011235578999999755443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG1523|consensus

Probab=89.16  E-value=26  Score=35.03  Aligned_cols=175  Identities=17%  Similarity=0.230  Sum_probs=85.8

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEEC-CCCce--eEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSI-NEGTC--DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ  319 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~-~~g~~--~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~  319 (790)
                      ..+..++.+.|+|.+. ++.......    -|+... ++++-  +.+..+-+     +......|||.+.+|+ +.+   
T Consensus        53 ~Hd~~vtgvdWap~snrIvtcs~drn----ayVw~~~~~~~WkptlvLlRiN-----rAAt~V~WsP~enkFA-VgS---  119 (361)
T KOG1523|consen   53 EHDKIVTGVDWAPKSNRIVTCSHDRN----AYVWTQPSGGTWKPTLVLLRIN-----RAATCVKWSPKENKFA-VGS---  119 (361)
T ss_pred             hhCcceeEEeecCCCCceeEccCCCC----ccccccCCCCeeccceeEEEec-----cceeeEeecCcCceEE-ecc---
Confidence            4556677899999986 666543322    344444 44432  22222211     1144789999999998 444   


Q ss_pred             ccCCCCCcCcccEEEEEEcCCCCc--ccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463          320 ESDGSTPVDSWDHLTFIDLDDQAG--IKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT  397 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~~d~~~~~~--~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~  397 (790)
                         |      -.-|-+.-.+..+.  ++....+++..   .+.. +.|.|++-.++..+.++.-.-...|+-.++.+...
T Consensus       120 ---g------ar~isVcy~E~ENdWWVsKhikkPirS---tv~s-ldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap  186 (361)
T KOG1523|consen  120 ---G------ARLISVCYYEQENDWWVSKHIKKPIRS---TVTS-LDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAP  186 (361)
T ss_pred             ---C------ccEEEEEEEecccceehhhhhCCcccc---ceee-eeccCCcceecccccCcceeEEEEeeeccccCCCC
Confidence               3      12232222222210  00001122211   2333 88999887666655553311233444444432110


Q ss_pred             ---cceeeec-c-cccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          398 ---PECITCD-L-LTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       398 ---~~~lt~~-~-~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                         -..+..+ + .......+.+..+.|||+|..+++.....   .+.+.|..+.
T Consensus       187 ~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds---~v~~~da~~p  238 (361)
T KOG1523|consen  187 TPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDS---TVSFVDAAGP  238 (361)
T ss_pred             CCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCC---ceEEeecCCC
Confidence               0000000 0 00001345778899999999999874333   3566665543

>KOG3724|consensus

Probab=89.05  E-value=0.64  Score=51.64  Aligned_cols=40  Identities=15%  Similarity=0.151  Sum_probs=28.6

Q ss_pred             hhHHHHHHHHHHHhCC---CcC---CCceEEEEechHHHHHHHHHh
Q psy463          564 IYDQINVTRYLQENLP---YID---KTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~---~~d---~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      .+=+.+|++++.+.+.   ..+   +..|+++||||||.+|..++.
T Consensus       156 tEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t  201 (973)
T KOG3724|consen  156 TEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT  201 (973)
T ss_pred             HHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh
Confidence            4445667777776432   222   456999999999999988776

>KOG0307|consensus

Probab=89.03  E-value=6.1  Score=45.97  Aligned_cols=116  Identities=15%  Similarity=0.238  Sum_probs=65.6

Q ss_pred             CEEEEEEEccCCc-EEEEEeccCcceEEEEEECCC--CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          247 PVLSRVNWANESV-VAAWVNRVQNRARITRCSINE--GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       247 ~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~--g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ...+.+.|.||+. .+.....++..+.|-+.|+.-  -..+.+....  .+    .-...|.+.+..++++..    +++
T Consensus       207 ~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~--~G----ilslsWc~~D~~lllSsg----kD~  276 (1049)
T KOG0307|consen  207 MHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQ--RG----ILSLSWCPQDPRLLLSSG----KDN  276 (1049)
T ss_pred             cceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccc--cc----eeeeccCCCCchhhhccc----CCC
Confidence            4567899999998 555555555555577776542  2222221111  11    336889999877774443    556


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCccccc-CCCeEEeEEEeeecCCCEE-EEEEcCCCCceEEEEEEE
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLT-RGRFTVTEILAWDEKENNV-YFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-~~~~~~~~~~~~s~dg~~l-~~~~~~~~~~~~~l~~~~  390 (790)
                              ++..++.++++     ..-.+. .++|-..  ..|.|..-.+ ...+-+|.   ..||.+.
T Consensus       277 --------~ii~wN~~tgE-----vl~~~p~~~nW~fd--v~w~pr~P~~~A~asfdgk---I~I~sl~  327 (1049)
T KOG0307|consen  277 --------RIICWNPNTGE-----VLGELPAQGNWCFD--VQWCPRNPSVMAAASFDGK---ISIYSLQ  327 (1049)
T ss_pred             --------CeeEecCCCce-----EeeecCCCCcceee--eeecCCCcchhhhheeccc---eeeeeee
Confidence                    68889988877     122332 3444332  6787765533 22233332   5565543

>KOG1034|consensus

Probab=88.98  E-value=27  Score=35.03  Aligned_cols=84  Identities=13%  Similarity=0.212  Sum_probs=57.6

Q ss_pred             ccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCC
Q psy463          202 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINE  280 (790)
Q Consensus       202 ~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~  280 (790)
                      +.+.|+++|+.+++.     ...+.                 .....+.++.+-|+.- ++...+.++.   |-+.+..+
T Consensus       113 ~~GvIrVid~~~~~~-----~~~~~-----------------ghG~sINeik~~p~~~qlvls~SkD~s---vRlwnI~~  167 (385)
T KOG1034|consen  113 YLGVIRVIDVVSGQC-----SKNYR-----------------GHGGSINEIKFHPDRPQLVLSASKDHS---VRLWNIQT  167 (385)
T ss_pred             ceeEEEEEecchhhh-----cccee-----------------ccCccchhhhcCCCCCcEEEEecCCce---EEEEeccC
Confidence            457999999988763     23333                 4456677888889876 6555554432   88888889


Q ss_pred             CceeEEEEEeCCCcccccCCceeEccCCCEEE
Q psy463          281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKML  312 (790)
Q Consensus       281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~  312 (790)
                      ..|..++..-  .+..+-.-+..||+||.+|+
T Consensus       168 ~~Cv~VfGG~--egHrdeVLSvD~~~~gd~i~  197 (385)
T KOG1034|consen  168 DVCVAVFGGV--EGHRDEVLSVDFSLDGDRIA  197 (385)
T ss_pred             CeEEEEeccc--ccccCcEEEEEEcCCCCeee
Confidence            9988887532  23333345789999999776

>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2

Probab=88.43  E-value=0.58  Score=49.87  Aligned_cols=51  Identities=16%  Similarity=0.137  Sum_probs=36.4

Q ss_pred             hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC-----ceEEEEEeCCC
Q psy463          565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN-----VFKCGISVAPV  619 (790)
Q Consensus       565 ~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~-----~~~~~v~~~~~  619 (790)
                      ..+...++.+.+    .+..||.|+||||||.++..++...+..     .++..|.+++.
T Consensus       104 ~~lk~~ie~~~~----~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p  159 (389)
T PF02450_consen  104 TKLKQLIEEAYK----KNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTP  159 (389)
T ss_pred             HHHHHHHHHHHH----hcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence            444455555544    2258999999999999999988877543     46777777765

3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=88.43  E-value=4.7  Score=32.28  Aligned_cols=63  Identities=16%  Similarity=0.241  Sum_probs=40.1

Q ss_pred             EeeecCCCEEEEEEcC-------------CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEE
Q psy463          363 LAWDEKENNVYFLSTQ-------------GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVL  429 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~~-------------~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~  429 (790)
                      +..++++..|||+...             ......+|++++..+  ++.+.|-.       +-+.-..+++|+|++++++
T Consensus         3 ldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t--~~~~vl~~-------~L~fpNGVals~d~~~vlv   73 (89)
T PF03088_consen    3 LDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPST--KETTVLLD-------GLYFPNGVALSPDESFVLV   73 (89)
T ss_dssp             EEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTT--TEEEEEEE-------EESSEEEEEE-TTSSEEEE
T ss_pred             eeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCC--CeEEEehh-------CCCccCeEEEcCCCCEEEE
Confidence            4567776678887543             012347899999988  66666665       4456678999999999888


Q ss_pred             EeecC
Q psy463          430 SCIGP  434 (790)
Q Consensus       430 ~~~~~  434 (790)
                      +....
T Consensus        74 ~Et~~   78 (89)
T PF03088_consen   74 AETGR   78 (89)
T ss_dssp             EEGGG
T ss_pred             EeccC
Confidence            75544

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>KOG1963|consensus

Probab=88.42  E-value=35  Score=38.82  Aligned_cols=100  Identities=18%  Similarity=0.206  Sum_probs=61.9

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCC--C---ceeEEEEEeCCCccc-ccCCceeEccCCCEEEEEEccccccC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINE--G---TCDVVFSRDLDRGWF-EPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~--g---~~~~l~~~~~~~~~~-~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      ..-.+.||.+++++...-.+.   |.+..--+  +   .++.+       .|. .......||+||..|+ ...    +.
T Consensus       208 ~t~~~~spn~~~~Aa~d~dGr---I~vw~d~~~~~~~~t~t~l-------HWH~~~V~~L~fS~~G~~Ll-SGG----~E  272 (792)
T KOG1963|consen  208 ITCVALSPNERYLAAGDSDGR---ILVWRDFGSSDDSETCTLL-------HWHHDEVNSLSFSSDGAYLL-SGG----RE  272 (792)
T ss_pred             ceeEEeccccceEEEeccCCc---EEEEeccccccccccceEE-------EecccccceeEEecCCceEe-ecc----cc
Confidence            567899999997766654322   44443222  1   12221       233 2256899999999886 443    44


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      |        -|.++.+++++      .+.|..-...+.+ +.||||+......-.+
T Consensus       273 ~--------VLv~Wq~~T~~------kqfLPRLgs~I~~-i~vS~ds~~~sl~~~D  313 (792)
T KOG1963|consen  273 G--------VLVLWQLETGK------KQFLPRLGSPILH-IVVSPDSDLYSLVLED  313 (792)
T ss_pred             e--------EEEEEeecCCC------cccccccCCeeEE-EEEcCCCCeEEEEecC
Confidence            4        67788888776      5555543334454 7899999866555555

>PRK13613 lipoprotein LpqB; Provisional

Probab=88.35  E-value=19  Score=40.62  Aligned_cols=108  Identities=14%  Similarity=0.077  Sum_probs=55.9

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecc-cceeE-EE
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRV-QNRAR-IT   86 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~-~~~~~-~~   86 (790)
                      ...+++.|+||+.+|++..  ....+|+=++.++....+. ..  .-++-.......|..++  -.|+.+. ..... +.
T Consensus       364 ~~~s~avS~~g~~~A~v~~--~~~~l~vg~~~~~~~~~~~-~~--~~~~~~~Lt~PS~d~~g--~vWtvd~~~~~~~vl~  436 (599)
T PRK13613        364 PLRRVAVSRDESRAAGISA--DGDSVYVGSLTPGASIGVH-SW--GVTADGRLTSPSWDGRG--DLWVVDRDPADPRLLW  436 (599)
T ss_pred             CccceEEcCCCceEEEEcC--CCcEEEEeccCCCCccccc-cc--eeeccCcccCCcCcCCC--CEEEecCCCCCceEEE
Confidence            3467899999999999963  3346676666444310000 00  01111223345665444  4677644 22221 22


Q ss_pred             EeeCCCCeeeEEEeecCCCCcccc--CCccccccCCceEEEEeec
Q psy463           87 RCSINEGTCDVVFSRDLDRGWFEP--FDHLRFSSDGKKMLLILSH  129 (790)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~spdg~~i~~~~~~  129 (790)
                      +... +|....+-   .  .|+..  ....+.|+||-+++++...
T Consensus       437 v~~~-~G~~~~V~---~--~~l~g~~I~~lrvSrDG~RvAvv~~~  475 (599)
T PRK13613        437 LLQG-DGEPVEVR---T--PELDGHRVVAVRVARDGVRVALIVEK  475 (599)
T ss_pred             EEcC-CCcEEEee---c--cccCCCEeEEEEECCCccEEEEEEec
Confidence            2222 34432211   1  25532  3457889999999988754

>KOG1009|consensus

Probab=88.30  E-value=12  Score=38.44  Aligned_cols=57  Identities=16%  Similarity=0.160  Sum_probs=37.7

Q ss_pred             EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      ++|+||+..+.+.+.+     ..++..++..  |...++-.+      +...+..++|.|-+++++--..
T Consensus       129 L~Ws~d~~~l~s~s~d-----ns~~l~Dv~~--G~l~~~~~d------h~~yvqgvawDpl~qyv~s~s~  185 (434)
T KOG1009|consen  129 LAWSPDSNFLVSGSVD-----NSVRLWDVHA--GQLLAILDD------HEHYVQGVAWDPLNQYVASKSS  185 (434)
T ss_pred             hhccCCCceeeeeecc-----ceEEEEEecc--ceeEeeccc------cccccceeecchhhhhhhhhcc
Confidence            7899999988887766     4555566655  554444332      4445566889998888765433

>KOG1408|consensus

Probab=88.26  E-value=3.6  Score=45.14  Aligned_cols=102  Identities=21%  Similarity=0.277  Sum_probs=61.4

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      ....+||++|++++ +.     .-|.     ...+-+++++.-.     .+..+..+.+.+.- .+|+|.+++|+-.+..
T Consensus        81 ~t~vAfS~~Gryva-tG-----EcG~-----~pa~kVw~la~h~-----vVAEfvdHKY~vtc-vaFsp~~kyvvSVGsQ  143 (1080)
T KOG1408|consen   81 LTCVAFSQNGRYVA-TG-----ECGR-----TPASKVWSLAFHG-----VVAEFVDHKYNVTC-VAFSPGNKYVVSVGSQ  143 (1080)
T ss_pred             eeEEEEcCCCcEEE-ec-----ccCC-----Cccceeeeecccc-----chhhhhhcccccee-eeecCCCcEEEeeccc
Confidence            34689999999876 33     2332     3456677776432     25567777777776 7899999977655443


Q ss_pred             CCCceEEEE--EEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          379 GSPIVQHMY--RINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       379 ~~~~~~~l~--~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      .+ +-.+++  ++++.+.+.   .++          ..+.-++||.||+|++.+.
T Consensus       144 HD-MIVnv~dWr~N~~~asn---kis----------s~Vsav~fsEdgSYfvT~g  184 (1080)
T KOG1408|consen  144 HD-MIVNVNDWRVNSSGASN---KIS----------SVVSAVAFSEDGSYFVTSG  184 (1080)
T ss_pred             cc-eEEEhhhhhhccccccc---ccc----------eeEEEEEEccCCceeeeee
Confidence            21 222222  444433111   122          2455688999999887653

>KOG0294|consensus

Probab=87.68  E-value=32  Score=34.33  Aligned_cols=63  Identities=11%  Similarity=0.102  Sum_probs=41.9

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      ..+.+..++..|.||++..+.+++.   +.++++-.|+...++.-..      ......|+|.|.++++...
T Consensus       126 H~~~Vt~lsiHPS~KLALsVg~D~~---lr~WNLV~Gr~a~v~~L~~------~at~v~w~~~Gd~F~v~~~  188 (362)
T KOG0294|consen  126 HKGQVTDLSIHPSGKLALSVGGDQV---LRTWNLVRGRVAFVLNLKN------KATLVSWSPQGDHFVVSGR  188 (362)
T ss_pred             cccccceeEecCCCceEEEEcCCce---eeeehhhcCccceeeccCC------cceeeEEcCCCCEEEEEec
Confidence            3344778999999997777766653   6666666665443333211      1336899999998886554

>KOG0277|consensus

Probab=87.56  E-value=28  Score=33.59  Aligned_cols=159  Identities=11%  Similarity=0.073  Sum_probs=78.3

Q ss_pred             CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCC-ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEG-TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ...+..++||+.-. .++.. .+++.  +.+.|+.-. .+-..+++-.    .+ ..+..|++-.+.++++.+    -+|
T Consensus        60 ~D~LfdV~Wse~~e~~~~~a-~GDGS--Lrl~d~~~~s~Pi~~~kEH~----~E-V~Svdwn~~~r~~~ltsS----WD~  127 (311)
T KOG0277|consen   60 EDGLFDVAWSENHENQVIAA-SGDGS--LRLFDLTMPSKPIHKFKEHK----RE-VYSVDWNTVRRRIFLTSS----WDG  127 (311)
T ss_pred             ccceeEeeecCCCcceEEEE-ecCce--EEEeccCCCCcchhHHHhhh----hh-eEEeccccccceeEEeec----cCC
Confidence            44578899999888 33332 22233  444442211 1111121110    01 346788888777775555    677


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEE-EEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNV-YFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l-~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                              .|-+++..-++     .....+.+..-+.. ..|+|--.-+ +..+.++.   -+||-+...+   +...+.
T Consensus       128 --------TiKLW~~~r~~-----Sv~Tf~gh~~~Iy~-a~~sp~~~nlfas~Sgd~~---l~lwdvr~~g---k~~~i~  187 (311)
T KOG0277|consen  128 --------TIKLWDPNRPN-----SVQTFNGHNSCIYQ-AAFSPHIPNLFASASGDGT---LRLWDVRSPG---KFMSIE  187 (311)
T ss_pred             --------ceEeecCCCCc-----ceEeecCCccEEEE-EecCCCCCCeEEEccCCce---EEEEEecCCC---ceeEEE
Confidence                    34555543222     03333333333333 6788865434 33333333   5677666554   322222


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      .       .+..+-.-.|+.-...++++...  ...|+.+|++
T Consensus       188 a-------h~~Eil~cdw~ky~~~vl~Tg~v--d~~vr~wDir  221 (311)
T KOG0277|consen  188 A-------HNSEILCCDWSKYNHNVLATGGV--DNLVRGWDIR  221 (311)
T ss_pred             e-------ccceeEeecccccCCcEEEecCC--CceEEEEehh
Confidence            1       23344555677777767665332  2345555544

>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function

Probab=87.42  E-value=2.7  Score=31.11  Aligned_cols=45  Identities=18%  Similarity=0.116  Sum_probs=24.7

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCc
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSS  513 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~  513 (790)
                      +.|...+.+.||.-+...-+.+.........++|+|++.||...+
T Consensus        11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~s   55 (63)
T PF04083_consen   11 PCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQS   55 (63)
T ss_dssp             --EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--
T ss_pred             CcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccC
Confidence            357788899999988877665544111145678899999998876

The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=87.38  E-value=49  Score=36.15  Aligned_cols=193  Identities=12%  Similarity=0.090  Sum_probs=103.8

Q ss_pred             ccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc--EEEEEe--ccCcceEEEEEE
Q psy463          202 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV--VAAWVN--RVQNRARITRCS  277 (790)
Q Consensus       202 ~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~~~~~~--r~~~~~~i~~~~  277 (790)
                      -...|.-+++.|+..+++  .+.++                 -......-+.|-|.-.  ..-|+.  +..++..+.++.
T Consensus       130 ~d~ki~~~~ipg~~~rr~--~r~l~-----------------~N~~qDl~ivWW~~~~~e~~PWsP~~~e~draNl~L~~  190 (545)
T PF11768_consen  130 LDPKISYVDIPGPKGRRL--ERHLS-----------------VNSSQDLVIVWWPSAQDEVWPWSPISSEKDRANLHLLS  190 (545)
T ss_pred             cCceEEEEECCCCCCCcc--ceeEe-----------------eccCCCEEEEEecCCCCCcCCCCCccccchhccEEEEE
Confidence            346788888888776666  44444                 1122223355644432  344433  333445688888


Q ss_pred             CCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCC-
Q psy463          278 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR-  356 (790)
Q Consensus       278 ~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~-  356 (790)
                      ..+++.+.|.....+  |.  .-...||-.....++++......+|..    .-+-.+++...++      .+++.--. 
T Consensus       191 ~~~~klEvL~yirTE--~d--Pl~~~Fs~~~~~qi~tVE~s~s~~g~~----~~d~ciYE~~r~k------lqrvsvtsi  256 (545)
T PF11768_consen  191 CSGGKLEVLSYIRTE--ND--PLDVEFSLNQPYQIHTVEQSISVKGEP----SADSCIYECSRNK------LQRVSVTSI  256 (545)
T ss_pred             ecCCcEEEEEEEEec--CC--cEEEEccCCCCcEEEEEEEecCCCCCc----eeEEEEEEeecCc------eeEEEEEEE
Confidence            888877777654321  11  124667764444444654322233411    3344556665554      43332111 


Q ss_pred             ---eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463          357 ---FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG  433 (790)
Q Consensus       357 ---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~  433 (790)
                         ..+.. .+++|+.++++..-.++.   ..|  ++...   .....+.       ..+....++|.|+|..++.. +.
T Consensus       257 pL~s~v~~-ca~sp~E~kLvlGC~DgS---iiL--yD~~~---~~t~~~k-------a~~~P~~iaWHp~gai~~V~-s~  319 (545)
T PF11768_consen  257 PLPSQVIC-CARSPSEDKLVLGCEDGS---IIL--YDTTR---GVTLLAK-------AEFIPTLIAWHPDGAIFVVG-SE  319 (545)
T ss_pred             ecCCcceE-EecCcccceEEEEecCCe---EEE--EEcCC---Ceeeeee-------ecccceEEEEcCCCcEEEEE-cC
Confidence               11222 678999998988877743   444  44433   2222332       23455668999999977553 22


Q ss_pred             CCCCeEEEEecCC
Q psy463          434 PGIPEIMLFDKTG  446 (790)
Q Consensus       434 ~~~~~i~~~~~~~  446 (790)
                        .+++.++|.+=
T Consensus       320 --qGelQ~FD~AL  330 (545)
T PF11768_consen  320 --QGELQCFDMAL  330 (545)
T ss_pred             --CceEEEEEeec
Confidence              35677887654

>KOG0308|consensus

Probab=87.17  E-value=17  Score=39.89  Aligned_cols=165  Identities=16%  Similarity=0.171  Sum_probs=95.4

Q ss_pred             CCCCEEEEEEE-ccCCcEEEEEeccCcceEEEEEECCCCceeEE------EEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          244 NVEPVLSRVNW-ANESVVAAWVNRVQNRARITRCSINEGTCDVV------FSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       244 ~~~~~~~~~~w-spDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l------~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      ....|+..++. .++..+++...-+.   +|+++|+++|..+.+      +......+-.....+.+-++.|. ++ ...
T Consensus       115 ~H~DYVkcla~~ak~~~lvaSgGLD~---~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t-~i-vsG  189 (735)
T KOG0308|consen  115 THKDYVKCLAYIAKNNELVASGGLDR---KIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGT-II-VSG  189 (735)
T ss_pred             cccchheeeeecccCceeEEecCCCc---cEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcce-EE-Eec
Confidence            55677777777 55555555543222   399999998855322      11111112222233555666663 32 222


Q ss_pred             cccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCC
Q psy463          317 HNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTA  396 (790)
Q Consensus       317 ~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~  396 (790)
                            |     +...|.++|..+++     +...|..+...+.- +..++||.+++-.+.++.   .+||.+      +
T Consensus       190 ------g-----tek~lr~wDprt~~-----kimkLrGHTdNVr~-ll~~dDGt~~ls~sSDgt---IrlWdL------g  243 (735)
T KOG0308|consen  190 ------G-----TEKDLRLWDPRTCK-----KIMKLRGHTDNVRV-LLVNDDGTRLLSASSDGT---IRLWDL------G  243 (735)
T ss_pred             ------C-----cccceEEecccccc-----ceeeeeccccceEE-EEEcCCCCeEeecCCCce---EEeeec------c
Confidence                  2     25578999998876     35567666666665 678999999988877754   666654      4


Q ss_pred             CcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          397 TPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       397 ~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      ..+|++.-.+    ....+.....+|+=+++++   +..-..|++-|+.+
T Consensus       244 qQrCl~T~~v----H~e~VWaL~~~~sf~~vYs---G~rd~~i~~Tdl~n  286 (735)
T KOG0308|consen  244 QQRCLATYIV----HKEGVWALQSSPSFTHVYS---GGRDGNIYRTDLRN  286 (735)
T ss_pred             ccceeeeEEe----ccCceEEEeeCCCcceEEe---cCCCCcEEecccCC
Confidence            5567654211    2223444555565554433   33345688888876

>KOG0307|consensus

Probab=86.97  E-value=9.7  Score=44.43  Aligned_cols=101  Identities=14%  Similarity=0.115  Sum_probs=62.1

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      .+...|.||+..-+.+++   +.++      ..-|-++|+.--..    ..+.++.+...+.. +.|.+.+..+++++..
T Consensus       209 ~S~l~WhP~~aTql~~As---~dd~------~PviqlWDlR~ass----P~k~~~~H~~Gils-lsWc~~D~~lllSsgk  274 (1049)
T KOG0307|consen  209 CSVLAWHPDHATQLLVAS---GDDS------APVIQLWDLRFASS----PLKILEGHQRGILS-LSWCPQDPRLLLSSGK  274 (1049)
T ss_pred             eeeeeeCCCCceeeeeec---CCCC------CceeEeecccccCC----chhhhcccccceee-eccCCCCchhhhcccC
Confidence            347999999887665777   5555      45677778653210    14556666666665 8899988777777665


Q ss_pred             CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCc
Q psy463          379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVS  425 (790)
Q Consensus       379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~  425 (790)
                      .    .+++.-+.++  ++  .|..    +.....+++.+.|.|..-
T Consensus       275 D----~~ii~wN~~t--gE--vl~~----~p~~~nW~fdv~w~pr~P  309 (1049)
T KOG0307|consen  275 D----NRIICWNPNT--GE--VLGE----LPAQGNWCFDVQWCPRNP  309 (1049)
T ss_pred             C----CCeeEecCCC--ce--Eeee----cCCCCcceeeeeecCCCc
Confidence            3    3555555554  33  2221    112344667788887643

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=86.41  E-value=46  Score=34.94  Aligned_cols=168  Identities=14%  Similarity=0.210  Sum_probs=75.0

Q ss_pred             CCc---EEEEEeccC--cceEEEEEECCCCceeEEEEEeC--CCcccccCCceeE-cc-CCCEEEEEEccccccCCCCCc
Q psy463          257 ESV---VAAWVNRVQ--NRARITRCSINEGTCDVVFSRDL--DRGWFEPFDHLRF-SS-DGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       257 Dg~---~~~~~~r~~--~~~~i~~~~~~~g~~~~l~~~~~--~~~~~~~~~~~~~-sp-Dg~~i~~~~~~~~~~~g~~~~  327 (790)
                      +|+   ++..++|..  +.-.+|.+|..++..+.+.....  .....++++--.+ +| +|+..+ +++   .++|    
T Consensus       110 ~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya-~v~---~k~G----  181 (381)
T PF02333_consen  110 NGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYA-FVN---GKDG----  181 (381)
T ss_dssp             TTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEE-EEE---ETTS----
T ss_pred             CCceEEEEEEecCcCCCCeEEEEEecCCCCcceEcCCCCcccccccccceeeEEeecCCCCcEEE-EEe---cCCc----
Confidence            676   566677754  45679999988776655532100  0011112222222 44 566555 444   4667    


Q ss_pred             CcccEEEEEEcCC-CCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecc
Q psy463          328 DSWDHLTFIDLDD-QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDL  405 (790)
Q Consensus       328 ~~~~~l~~~d~~~-~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~  405 (790)
                        .-+.|.+...+ +. +.....+.+.-.. ++.+ ...+....+||+.-..     .-||+++++...+. .+.+... 
T Consensus       182 --~~~Qy~L~~~~~g~-v~~~lVR~f~~~s-Q~EG-CVVDDe~g~LYvgEE~-----~GIW~y~Aep~~~~~~~~v~~~-  250 (381)
T PF02333_consen  182 --RVEQYELTDDGDGK-VSATLVREFKVGS-QPEG-CVVDDETGRLYVGEED-----VGIWRYDAEPEGGNDRTLVASA-  250 (381)
T ss_dssp             --EEEEEEEEE-TTSS-EEEEEEEEEE-SS--EEE-EEEETTTTEEEEEETT-----TEEEEEESSCCC-S--EEEEEB-
T ss_pred             --eEEEEEEEeCCCCc-EeeEEEEEecCCC-cceE-EEEecccCCEEEecCc-----cEEEEEecCCCCCCcceeeecc-
Confidence              44455554332 22 0001133333222 3344 5667777777775444     57899887642222 2223211 


Q ss_pred             cccCCCcccEEEEEEe--cCC-cEEEEEeecCCCCeEEEEecCC
Q psy463          406 LTSANQKCSYSGATFS--TNV-SYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       406 ~~~~~~~~~~~~~~~s--~dg-~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .. ..-...+..+++-  .++ .||+.+..+.+  .+.+++.++
T Consensus       251 ~g-~~l~aDvEGlaly~~~~g~gYLivSsQG~~--sf~Vy~r~~  291 (381)
T PF02333_consen  251 DG-DGLVADVEGLALYYGSDGKGYLIVSSQGDN--SFAVYDREG  291 (381)
T ss_dssp             SS-SSB-S-EEEEEEEE-CCC-EEEEEEEGGGT--EEEEEESST
T ss_pred             cc-cccccCccceEEEecCCCCeEEEEEcCCCC--eEEEEecCC
Confidence            00 0001234445543  444 47777655443  555666543

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=86.36  E-value=51  Score=35.69  Aligned_cols=117  Identities=15%  Similarity=0.230  Sum_probs=55.1

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEe------CCCcccccCCceeEccCC------CEEEEEEcc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRD------LDRGWFEPFDHLRFSSDG------KKMLLILSH  317 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~------~~~~~~~~~~~~~~spDg------~~i~~~~~~  317 (790)
                      ..++|.|||+++. +.|..  -+|++++..++..+.+....      +..+-    ..++++||-      ++||++.+.
T Consensus        33 w~maflPDG~llV-tER~~--G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GL----lglal~PdF~~~~~n~~lYvsyt~  105 (454)
T TIGR03606        33 WALLWGPDNQLWV-TERAT--GKILRVNPETGEVKVVFTLPEIVNDAQHNGL----LGLALHPDFMQEKGNPYVYISYTY  105 (454)
T ss_pred             eEEEEcCCCeEEE-EEecC--CEEEEEeCCCCceeeeecCCceeccCCCCce----eeEEECCCccccCCCcEEEEEEec
Confidence            4678999998433 33311  13888877665543332111      11222    356677663      356655441


Q ss_pred             ccccCCCCCcCcccEEEEEEcCCCC-cccCCCccccc---CCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          318 NQESDGSTPVDSWDHLTFIDLDDQA-GIKDKVPVPLT---RGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       318 ~~~~~g~~~~~~~~~l~~~d~~~~~-~~~~~~~~~lt---~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                         ..+..-......|.++.++.+. ..... ...++   .......+.+.|+|||+ ||+...+
T Consensus       106 ---~~~~~~~~~~~~I~R~~l~~~~~~l~~~-~~Il~~lP~~~~H~GgrI~FgPDG~-LYVs~GD  165 (454)
T TIGR03606       106 ---KNGDKELPNHTKIVRYTYDKSTQTLEKP-VDLLAGLPAGNDHNGGRLVFGPDGK-IYYTIGE  165 (454)
T ss_pred             ---cCCCCCccCCcEEEEEEecCCCCccccc-eEEEecCCCCCCcCCceEEECCCCc-EEEEECC
Confidence               1110000014578787765321 00000 11111   11112233478999996 8876655

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification

Probab=86.03  E-value=0.87  Score=44.03  Aligned_cols=58  Identities=28%  Similarity=0.316  Sum_probs=45.8

Q ss_pred             chhhhhhccccchhhh--ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccC
Q psy463          642 NLEGYKIAALNNKVDR--IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMG  700 (790)
Q Consensus       642 ~~~~~~~~~~~~~~~~--~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~  700 (790)
                      ....|...++...+.+  .+ .|+|++||+.|.+||+.++.++.++|++.+.......|++
T Consensus       125 ~~~~~~~~s~~~~~~~~~~~-~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~  184 (213)
T PF00326_consen  125 NPEFYRELSPISPADNVQIK-PPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPG  184 (213)
T ss_dssp             SHHHHHHHHHGGGGGGCGGG-SEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT
T ss_pred             hhhhhhhhccccccccccCC-CCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCc
Confidence            3566767777777777  44 8999999999999999999999999999887644444433

; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....

>PLN02454 triacylglycerol lipase

Probab=85.62  E-value=1.3  Score=46.39  Aligned_cols=39  Identities=21%  Similarity=0.136  Sum_probs=27.9

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      .+++...++.+++.++. ..-+|.++|||+||.+|..+|.
T Consensus       209 r~qvl~~V~~l~~~Yp~-~~~sI~vTGHSLGGALAtLaA~  247 (414)
T PLN02454        209 RSQLLAKIKELLERYKD-EKLSIVLTGHSLGASLATLAAF  247 (414)
T ss_pred             HHHHHHHHHHHHHhCCC-CCceEEEEecCHHHHHHHHHHH
Confidence            45566677777764542 1225999999999999988874

>KOG1538|consensus

Probab=85.36  E-value=10  Score=41.43  Aligned_cols=57  Identities=23%  Similarity=0.357  Sum_probs=41.5

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEE
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFL  375 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~  375 (790)
                      ..+..|-|||..+++ +.      |       ..|+++|...|.     ....|-.+...+.- .+||.||+.++--
T Consensus        15 i~d~afkPDGsqL~l-AA------g-------~rlliyD~ndG~-----llqtLKgHKDtVyc-VAys~dGkrFASG   71 (1081)
T KOG1538|consen   15 INDIAFKPDGTQLIL-AA------G-------SRLLVYDTSDGT-----LLQPLKGHKDTVYC-VAYAKDGKRFASG   71 (1081)
T ss_pred             hheeEECCCCceEEE-ec------C-------CEEEEEeCCCcc-----cccccccccceEEE-EEEccCCceeccC
Confidence            457999999999984 43      3       369999997665     25567666666655 8999999865433

>PLN00413 triacylglycerol lipase

Probab=85.32  E-value=1.4  Score=46.89  Aligned_cols=37  Identities=22%  Similarity=0.278  Sum_probs=27.4

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      .+.+...++.+.+.++   ..++.|+|||+||.+|..++.
T Consensus       267 yy~i~~~Lk~ll~~~p---~~kliVTGHSLGGALAtLaA~  303 (479)
T PLN00413        267 YYTILRHLKEIFDQNP---TSKFILSGHSLGGALAILFTA  303 (479)
T ss_pred             HHHHHHHHHHHHHHCC---CCeEEEEecCHHHHHHHHHHH
Confidence            3455566666666444   468999999999999988764

>PRK13614 lipoprotein LpqB; Provisional

Probab=84.98  E-value=72  Score=35.81  Aligned_cols=172  Identities=16%  Similarity=0.090  Sum_probs=92.4

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ....++.|+||+.+++.+..  ...++.... ++..+.+.....       ...|+|.++| ++. ++.     +|.   
T Consensus       344 ~~~s~avS~~g~~~A~~~~~--~~~l~~~~~-g~~~~~~~~g~~-------Lt~PS~d~~g-~vW-tv~-----~g~---  403 (573)
T PRK13614        344 GPASPAESPVSQTVAFLNGS--RTTLYTVSP-GQPARALTSGST-------LTRPSFSPQD-WVW-TAG-----PGG---  403 (573)
T ss_pred             cccceeecCCCceEEEecCC--CcEEEEecC-CCcceeeecCCC-------ccCCcccCCC-CEE-Eee-----CCC---
Confidence            46688999999966665432  235776665 344454444221       4579999998 565 332     231   


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCC--C-eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC-CCCCCcceeee
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRG--R-FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA-DPTATPECITC  403 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~--~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~lt~  403 (790)
                        ..+|.++..++...........+...  . ..+.. +..|+||-++++....+.  ..+|++..+. ..+|.++.|+.
T Consensus       404 --~~~vv~~~~~g~~~~~~~~~~~v~~~~l~g~~I~~-lrvSrDG~R~Avi~~~~g--~~~V~va~V~R~~~G~P~~L~~  478 (573)
T PRK13614        404 --NGRIVAYRPTGVAEGAQAPTVTLTADWLAGRTVKE-LRVSREGVRALVISEQNG--KSRVQVAGIVRNEDGTPRELTA  478 (573)
T ss_pred             --CceEEEEecCCCcccccccceeecccccCCCeeEE-EEECCCccEEEEEEEeCC--ccEEEEEEEEeCCCCCeEEccC
Confidence              12565555332110000000011111  1 12443 889999999998875422  1456654331 12356667765


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .+ ... ......++.|..+++.++......+..+++++.+.+
T Consensus       479 ~~-~~~-~~~~~~sl~W~~~~sl~V~~~~~~~~~~~~~v~v~~  519 (573)
T PRK13614        479 PI-TLA-ADSDADTGAWVGDSTVVVTKASATSNVVPELLSVDA  519 (573)
T ss_pred             ce-ecc-cCCCcceeEEcCCCEEEEEeccCCCcceEEEEEeCC
Confidence            21 111 124566788999999777765443455667766643

>KOG4283|consensus

Probab=84.82  E-value=43  Score=33.08  Aligned_cols=112  Identities=19%  Similarity=0.216  Sum_probs=65.1

Q ss_pred             CCEEEEEEEccCCc---EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          246 EPVLSRVNWANESV---VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       246 ~~~~~~~~wspDg~---~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      ++-+.+-+|||=..   +++...|+   .++-+||+++|.+.-.+..-.     +..-...|||...++..+.+    .+
T Consensus       143 e~~VYshamSp~a~sHcLiA~gtr~---~~VrLCDi~SGs~sH~LsGHr-----~~vlaV~Wsp~~e~vLatgs----aD  210 (397)
T KOG4283|consen  143 EGKVYSHAMSPMAMSHCLIAAGTRD---VQVRLCDIASGSFSHTLSGHR-----DGVLAVEWSPSSEWVLATGS----AD  210 (397)
T ss_pred             CceeehhhcChhhhcceEEEEecCC---CcEEEEeccCCcceeeecccc-----CceEEEEeccCceeEEEecC----CC
Confidence            34455667888654   55554443   349999999999876654321     11447899999999886666    56


Q ss_pred             CCCCcCcccEEEEEEcC--CCCc--cc--CCCccc-c---cCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          323 GSTPVDSWDHLTFIDLD--DQAG--IK--DKVPVP-L---TRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~--~~~~--~~--~~~~~~-l---t~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      |        .+-++|+.  +|-.  ..  +.+..+ +   +.....+.+ ++|+-||.+++..+.+
T Consensus       211 g--------~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvng-la~tSd~~~l~~~gtd  267 (397)
T KOG4283|consen  211 G--------AIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNG-LAWTSDARYLASCGTD  267 (397)
T ss_pred             c--------eEEEEEeecccceeEEeecccCccCccccccccccceeee-eeecccchhhhhccCc
Confidence            6        23344432  1210  00  000111 1   122233444 8899999888777666

>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins

Probab=84.69  E-value=3.4  Score=39.33  Aligned_cols=37  Identities=11%  Similarity=-0.097  Sum_probs=27.0

Q ss_pred             EEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          729 LLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       729 Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                      ..+.|.+|.+.|+++.+.+++..      +....+ +++|....
T Consensus       169 ~aiIg~~D~IFpp~nQ~~~W~~~------~~~~~~-~~~Hy~F~  205 (213)
T PF04301_consen  169 KAIIGKKDRIFPPENQKRAWQGR------CTIVEI-DAPHYPFF  205 (213)
T ss_pred             EEEEcCCCEEeCHHHHHHHHhCc------CcEEEe-cCCCcCch
Confidence            36889999999999988887632      134455 46998764

>KOG1520|consensus

Probab=84.02  E-value=17  Score=37.56  Aligned_cols=136  Identities=15%  Similarity=0.168  Sum_probs=72.9

Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc-------------ccCCCCCcCcccEEEEEEcC
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ-------------ESDGSTPVDSWDHLTFIDLD  339 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~-------------~~~g~~~~~~~~~l~~~d~~  339 (790)
                      |+.++.+++..+.+..+.. +.-.........+++|. |+|+-++..             +.+|        .|+.+|..
T Consensus       138 L~~V~p~g~~a~~l~~~~~-G~~~kf~N~ldI~~~g~-vyFTDSSsk~~~rd~~~a~l~g~~~G--------Rl~~YD~~  207 (376)
T KOG1520|consen  138 LLKVGPEGGLAELLADEAE-GKPFKFLNDLDIDPEGV-VYFTDSSSKYDRRDFVFAALEGDPTG--------RLFRYDPS  207 (376)
T ss_pred             eEEECCCCCcceecccccc-CeeeeecCceeEcCCCe-EEEeccccccchhheEEeeecCCCcc--------ceEEecCc
Confidence            7778888877666655432 11111134566677554 555544210             2334        57777776


Q ss_pred             CCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCC-CCCcceeeecccccCCCcccEEEE
Q psy463          340 DQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADP-TATPECITCDLLTSANQKCSYSGA  418 (790)
Q Consensus       340 ~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~~lt~~~~~~~~~~~~~~~~  418 (790)
                      +++      .+.|-.+-.-..+ ++.|||+..++|.-..-    .+|-++=+++. .|+.+..+..+      .+.-.++
T Consensus       208 tK~------~~VLld~L~F~NG-laLS~d~sfvl~~Et~~----~ri~rywi~g~k~gt~EvFa~~L------PG~PDNI  270 (376)
T KOG1520|consen  208 TKV------TKVLLDGLYFPNG-LALSPDGSFVLVAETTT----ARIKRYWIKGPKAGTSEVFAEGL------PGYPDNI  270 (376)
T ss_pred             ccc------hhhhhhccccccc-ccCCCCCCEEEEEeecc----ceeeeeEecCCccCchhhHhhcC------CCCCcce
Confidence            665      6666555433334 78899999888875542    23444434331 13333333321      1222346


Q ss_pred             EEecCCcEEEEEeecCC
Q psy463          419 TFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       419 ~~s~dg~~~~~~~~~~~  435 (790)
                      ..+++|.+++......+
T Consensus       271 R~~~~G~fWVal~~~~~  287 (376)
T KOG1520|consen  271 RRDSTGHFWVALHSKRS  287 (376)
T ss_pred             eECCCCCEEEEEecccc
Confidence            77888887766544443

>PLN02408 phospholipase A1

Probab=83.91  E-value=1.7  Score=45.02  Aligned_cols=37  Identities=16%  Similarity=0.025  Sum_probs=25.9

Q ss_pred             HHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463          566 DQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       566 D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      .+.+.++.+++.++. ...+|.|+|||+||.+|..++.
T Consensus       183 qVl~eI~~ll~~y~~-~~~sI~vTGHSLGGALAtLaA~  219 (365)
T PLN02408        183 MVREEIARLLQSYGD-EPLSLTITGHSLGAALATLTAY  219 (365)
T ss_pred             HHHHHHHHHHHhcCC-CCceEEEeccchHHHHHHHHHH
Confidence            444556666654442 2346999999999999987765

>KOG0647|consensus

Probab=83.28  E-value=6.8  Score=38.52  Aligned_cols=97  Identities=19%  Similarity=0.195  Sum_probs=59.4

Q ss_pred             CCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCce--eEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          245 VEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTC--DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       245 ~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~--~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                      .+..++.++|||... ++...+. .+.-+||.+... |..  +.+...+      .+.-...||.||.+++ +.+    -
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SW-D~tVR~wevq~~-g~~~~ka~~~~~------~PvL~v~WsddgskVf-~g~----~   92 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSW-DGTVRIWEVQNS-GQLVPKAQQSHD------GPVLDVCWSDDGSKVF-SGG----C   92 (347)
T ss_pred             cccchheeEeccccCceEEeccc-CCceEEEEEecC-CcccchhhhccC------CCeEEEEEccCCceEE-eec----c
Confidence            345678999999555 4434433 344556666544 322  1111111      1244789999998776 554    4


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCC
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE  369 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg  369 (790)
                      ++        ++-++|+.+++      ..++..++..+.. ..|-+..
T Consensus        93 Dk--------~~k~wDL~S~Q------~~~v~~Hd~pvkt-~~wv~~~  125 (347)
T KOG0647|consen   93 DK--------QAKLWDLASGQ------VSQVAAHDAPVKT-CHWVPGM  125 (347)
T ss_pred             CC--------ceEEEEccCCC------eeeeeecccceeE-EEEecCC
Confidence            55        67888999998      8787777666654 5665443

>PLN02571 triacylglycerol lipase

Probab=83.07  E-value=1.9  Score=45.39  Aligned_cols=38  Identities=21%  Similarity=0.194  Sum_probs=26.5

Q ss_pred             hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463          565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       565 ~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      +++...++.+.+.++. ..-+|.|+|||+||.+|..+|.
T Consensus       208 ~qvl~eV~~L~~~y~~-e~~sI~VTGHSLGGALAtLaA~  245 (413)
T PLN02571        208 DQVLNEVGRLVEKYKD-EEISITICGHSLGAALATLNAV  245 (413)
T ss_pred             HHHHHHHHHHHHhcCc-ccccEEEeccchHHHHHHHHHH
Confidence            4555666666654431 1237999999999999988775

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=82.98  E-value=7  Score=31.32  Aligned_cols=73  Identities=18%  Similarity=0.186  Sum_probs=43.4

Q ss_pred             eeEccCCCEEEEEEcccc-------------ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecC
Q psy463          302 LRFSSDGKKMLLILSHNQ-------------ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEK  368 (790)
Q Consensus       302 ~~~spDg~~i~~~~~~~~-------------~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~d  368 (790)
                      ....+|+..|+|+-++..             ..+|        .|+.+|..+++      .+.|..+-.-..+ ++.++|
T Consensus         3 ldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~G--------Rll~ydp~t~~------~~vl~~~L~fpNG-Vals~d   67 (89)
T PF03088_consen    3 LDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTG--------RLLRYDPSTKE------TTVLLDGLYFPNG-VALSPD   67 (89)
T ss_dssp             EEE-TTT--EEEEES-SS--TTGHHHHHHHT---E--------EEEEEETTTTE------EEEEEEEESSEEE-EEE-TT
T ss_pred             eeEecCCCEEEEEeCccccCccceeeeeecCCCCc--------CEEEEECCCCe------EEEehhCCCccCe-EEEcCC
Confidence            556777555776655220             1233        89999999987      6666655333334 789999


Q ss_pred             CCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          369 ENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       369 g~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ++.|++.-...    .+|.++-+++
T Consensus        68 ~~~vlv~Et~~----~Ri~rywl~G   88 (89)
T PF03088_consen   68 ESFVLVAETGR----YRILRYWLKG   88 (89)
T ss_dssp             SSEEEEEEGGG----TEEEEEESSS
T ss_pred             CCEEEEEeccC----ceEEEEEEeC
Confidence            99888876553    3566665543

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function

Probab=82.83  E-value=22  Score=39.49  Aligned_cols=40  Identities=13%  Similarity=0.191  Sum_probs=27.1

Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                      +...+..+++.+++........    ...+.|+|||+.|++...
T Consensus       482 ~~~~~~~~g~~~rf~~~P~gaE----~tG~~fspDg~tlFvniQ  521 (524)
T PF05787_consen  482 VWAYDPDTGELKRFLVGPNGAE----ITGPCFSPDGRTLFVNIQ  521 (524)
T ss_pred             eeeccccccceeeeccCCCCcc----cccceECCCCCEEEEEEe
Confidence            5566677777777765432211    457999999999886554

>PLN02934 triacylglycerol lipase

Probab=82.81  E-value=1.8  Score=46.33  Aligned_cols=37  Identities=19%  Similarity=0.174  Sum_probs=27.9

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      .+.+...++.+++.++   ..++.++|||+||.+|..++.
T Consensus       304 y~~v~~~lk~ll~~~p---~~kIvVTGHSLGGALAtLaA~  340 (515)
T PLN02934        304 YYAVRSKLKSLLKEHK---NAKFVVTGHSLGGALAILFPT  340 (515)
T ss_pred             HHHHHHHHHHHHHHCC---CCeEEEeccccHHHHHHHHHH
Confidence            4456666777766444   368999999999999988763

>KOG2321|consensus

Probab=82.77  E-value=78  Score=34.50  Aligned_cols=113  Identities=12%  Similarity=0.263  Sum_probs=57.9

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe-EEEeeecCCCE-EEEEE
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT-EILAWDEKENN-VYFLS  376 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~-~~~~~s~dg~~-l~~~~  376 (790)
                      .....|+.||-.++ +..    ..|        +++++|+.+.+      +..+-.+..++. -.+.|-+.+.. .+++.
T Consensus       231 vTal~F~d~gL~~a-VGt----s~G--------~v~iyDLRa~~------pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~  291 (703)
T KOG2321|consen  231 VTALKFRDDGLHVA-VGT----STG--------SVLIYDLRASK------PLLVKDHGYELPIKKLDWQDTDQQNKVVSM  291 (703)
T ss_pred             ceEEEecCCceeEE-eec----cCC--------cEEEEEcccCC------ceeecccCCccceeeecccccCCCceEEec
Confidence            44788999998887 343    467        79999998876      544444433321 12566443221 22222


Q ss_pred             cCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          377 TQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       377 ~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                      +..-   ..||--  ..  |++  .+.     .+..+.+..+.+-|++..+.+.-.+...+.+|+-++
T Consensus       292 Dk~~---~kiWd~--~~--Gk~--~as-----iEpt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~L  345 (703)
T KOG2321|consen  292 DKRI---LKIWDE--CT--GKP--MAS-----IEPTSDLNDFCFVPGSGMFFTANESSKMHTYYIPSL  345 (703)
T ss_pred             chHH---hhhccc--cc--CCc--eee-----ccccCCcCceeeecCCceEEEecCCCcceeEEcccc
Confidence            2211   222211  11  211  111     012344566778888776655544444666666544

>KOG0650|consensus

Probab=82.66  E-value=80  Score=34.58  Aligned_cols=102  Identities=10%  Similarity=0.214  Sum_probs=57.7

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      .....|..+|.+|+.+..    ..+      ...+++..+....     ...++......+.. ..|.|-..++++.+. 
T Consensus       524 i~~vtWHrkGDYlatV~~----~~~------~~~VliHQLSK~~-----sQ~PF~kskG~vq~-v~FHPs~p~lfVaTq-  586 (733)
T KOG0650|consen  524 IRQVTWHRKGDYLATVMP----DSG------NKSVLIHQLSKRK-----SQSPFRKSKGLVQR-VKFHPSKPYLFVATQ-  586 (733)
T ss_pred             cceeeeecCCceEEEecc----CCC------cceEEEEeccccc-----ccCchhhcCCceeE-EEecCCCceEEEEec-
Confidence            356789999999884433    344      5567777775433     01122222222222 567787666655543 


Q ss_pred             CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                           +.|.++++..  .   .|+..++   ++-..+++.+++|.|..++..
T Consensus       587 -----~~vRiYdL~k--q---elvKkL~---tg~kwiS~msihp~GDnli~g  625 (733)
T KOG0650|consen  587 -----RSVRIYDLSK--Q---ELVKKLL---TGSKWISSMSIHPNGDNLILG  625 (733)
T ss_pred             -----cceEEEehhH--H---HHHHHHh---cCCeeeeeeeecCCCCeEEEe
Confidence                 3556666644  1   1221111   155678889999998877654

>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children

Probab=82.56  E-value=8.2  Score=38.36  Aligned_cols=111  Identities=15%  Similarity=0.058  Sum_probs=50.2

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHh--cCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHH
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD--NKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQ  575 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~--~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~  575 (790)
                      ....| ||+.||.+.+-  ....+......+..  --|.-|.+++. |.+.. .+......     ..+.+..+.+...+
T Consensus         3 ~~~~P-vViwHGmGD~~--~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~-~D~~~s~f-----~~v~~Qv~~vc~~l   72 (279)
T PF02089_consen    3 PSPLP-VVIWHGMGDSC--CNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPS-EDVENSFF-----GNVNDQVEQVCEQL   72 (279)
T ss_dssp             TSS---EEEE--TT--S----TTTHHHHHHHHHHHSTT--EEE--S-SSSHH-HHHHHHHH-----SHHHHHHHHHHHHH
T ss_pred             CCCCc-EEEEEcCcccc--CChhHHHHHHHHHHHhCCCceEEEEEE-CCCcc-hhhhhhHH-----HHHHHHHHHHHHHH
Confidence            34455 55779976541  11122222222222  13767777765 32211 11111111     22455554444444


Q ss_pred             HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      +..+.+. .-+.++|+|.||.++=.++.+.+...++-.|..++.
T Consensus        73 ~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp  115 (279)
T PF02089_consen   73 ANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP  115 (279)
T ss_dssp             HH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred             hhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence            4344332 469999999999999999999887678877776654

Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.

>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria

Probab=82.51  E-value=4  Score=37.68  Aligned_cols=53  Identities=19%  Similarity=0.125  Sum_probs=33.1

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP  618 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~  618 (790)
                      ..++...++-|....  ....++.++|||||..++..++...+...-..++..+|
T Consensus        91 a~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP  143 (177)
T PF06259_consen   91 APRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP  143 (177)
T ss_pred             HHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence            334444444444422  34569999999999999999887633323335555555

Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.

>PLN02310 triacylglycerol lipase

Probab=82.30  E-value=3.6  Score=43.21  Aligned_cols=39  Identities=15%  Similarity=0.058  Sum_probs=26.1

Q ss_pred             hHHHHHHHHHHHhCCCcC-CCceEEEEechHHHHHHHHHh
Q psy463          565 YDQINVTRYLQENLPYID-KTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       565 ~D~~~~~~~l~~~~~~~d-~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      +.+.+.++.+.+.++.-+ ..+|.|+|||+||.+|..++.
T Consensus       189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~  228 (405)
T PLN02310        189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY  228 (405)
T ss_pred             HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence            344555666655333212 248999999999999988774

>PLN02162 triacylglycerol lipase

Probab=82.19  E-value=2.1  Score=45.35  Aligned_cols=37  Identities=22%  Similarity=0.166  Sum_probs=25.7

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      +..+.+.++.+.++.+   ..++.++|||+||.+|..++.
T Consensus       261 y~~I~~~L~~lL~k~p---~~kliVTGHSLGGALAtLaAa  297 (475)
T PLN02162        261 YYTIRQMLRDKLARNK---NLKYILTGHSLGGALAALFPA  297 (475)
T ss_pred             HHHHHHHHHHHHHhCC---CceEEEEecChHHHHHHHHHH
Confidence            3445555555554333   468999999999999987654

>KOG1063|consensus

Probab=81.89  E-value=92  Score=34.76  Aligned_cols=123  Identities=17%  Similarity=0.118  Sum_probs=62.8

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      +.+..+..+.|+|++. ++..+...  ...++.=+-++|-......-....+....+-.-.|+|++..|+  +.   ...
T Consensus       265 GHeDWV~sv~W~p~~~~LLSASaDk--smiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii--~~---g~~  337 (764)
T KOG1063|consen  265 GHEDWVYSVWWHPEGLDLLSASADK--SMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVII--AH---GRT  337 (764)
T ss_pred             CcccceEEEEEccchhhheecccCc--ceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEE--Ee---ccc
Confidence            5567889999999996 44433322  1122332333343322222111111111133678999997554  33   256


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR  388 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  388 (790)
                      |      --|+|. +-+..    +........| ...+.. +.|+|.|+.|.-.+.+..   .+|+.
T Consensus       338 G------g~hlWk-t~d~~----~w~~~~~iSGH~~~V~d-v~W~psGeflLsvs~DQT---TRlFa  389 (764)
T KOG1063|consen  338 G------GFHLWK-TKDKT----FWTQEPVISGHVDGVKD-VDWDPSGEFLLSVSLDQT---TRLFA  389 (764)
T ss_pred             C------cEEEEe-ccCcc----ceeecccccccccccee-eeecCCCCEEEEeccccc---eeeec
Confidence            6      346666 11111    1112233333 345565 899999997666665533   55554

>KOG0269|consensus

Probab=81.10  E-value=24  Score=39.53  Aligned_cols=164  Identities=11%  Similarity=0.129  Sum_probs=94.2

Q ss_pred             CCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          245 VEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       245 ~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ....+..+.|++--- ++..-+++.   -|-.+|+........+....     +..++..|||--...++...    ..|
T Consensus       132 H~Rs~~~ldfh~tep~iliSGSQDg---~vK~~DlR~~~S~~t~~~nS-----ESiRDV~fsp~~~~~F~s~~----dsG  199 (839)
T KOG0269|consen  132 HERSANKLDFHSTEPNILISGSQDG---TVKCWDLRSKKSKSTFRSNS-----ESIRDVKFSPGYGNKFASIH----DSG  199 (839)
T ss_pred             hccceeeeeeccCCccEEEecCCCc---eEEEEeeecccccccccccc-----hhhhceeeccCCCceEEEec----CCc
Confidence            445567778887665 444444433   25566666555444443321     12568999997544443443    456


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                              -|-++|+.--.    ....+++.+...+.- +.|+|++.+|+--+.+   +...||-+.-    .+...+.+
T Consensus       200 --------~lqlWDlRqp~----r~~~k~~AH~GpV~c-~nwhPnr~~lATGGRD---K~vkiWd~t~----~~~~~~~t  259 (839)
T KOG0269|consen  200 --------YLQLWDLRQPD----RCEKKLTAHNGPVLC-LNWHPNREWLATGGRD---KMVKIWDMTD----SRAKPKHT  259 (839)
T ss_pred             --------eEEEeeccCch----hHHHHhhcccCceEE-EeecCCCceeeecCCC---ccEEEEeccC----CCccceeE
Confidence                    46677875322    124568877666655 8899987766554433   2366776643    22222211


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      . .    ....+..+.|-|+..+.+.+++-.+--.|+++|++
T Consensus       260 I-n----Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvr  296 (839)
T KOG0269|consen  260 I-N----TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVR  296 (839)
T ss_pred             E-e----ecceeeeeeeccCccchhhhhhccccceEEEEeec
Confidence            0 0    12345567888988877777766666667777765

>PLN02324 triacylglycerol lipase

Probab=81.07  E-value=2.4  Score=44.47  Aligned_cols=38  Identities=18%  Similarity=0.110  Sum_probs=26.5

Q ss_pred             hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463          565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       565 ~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      +.+...++.+++.++. ..-+|.|+|||+||.+|..+|.
T Consensus       197 eqVl~eV~~L~~~Yp~-e~~sItvTGHSLGGALAtLaA~  234 (415)
T PLN02324        197 EQVQGELKRLLELYKN-EEISITFTGHSLGAVMSVLSAA  234 (415)
T ss_pred             HHHHHHHHHHHHHCCC-CCceEEEecCcHHHHHHHHHHH
Confidence            3445556666664542 1247999999999999988774

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=80.50  E-value=95  Score=34.03  Aligned_cols=70  Identities=17%  Similarity=0.282  Sum_probs=45.5

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      ....++||+.++++ +.-    .+|        .|.++|...+       ...++...... ..++|.|+|..+++.+.+
T Consensus       262 v~~ca~sp~E~kLv-lGC----~Dg--------SiiLyD~~~~-------~t~~~ka~~~P-~~iaWHp~gai~~V~s~q  320 (545)
T PF11768_consen  262 VICCARSPSEDKLV-LGC----EDG--------SIILYDTTRG-------VTLLAKAEFIP-TLIAWHPDGAIFVVGSEQ  320 (545)
T ss_pred             ceEEecCcccceEE-EEe----cCC--------eEEEEEcCCC-------eeeeeeecccc-eEEEEcCCCcEEEEEcCC
Confidence            34678999999998 444    467        6888897654       33444444333 348999999866666555


Q ss_pred             CCCceEEEEEEEcC
Q psy463          379 GSPIVQHMYRINIA  392 (790)
Q Consensus       379 ~~~~~~~l~~~~~~  392 (790)
                      |.   -++|-+.+.
T Consensus       321 Ge---lQ~FD~ALs  331 (545)
T PF11768_consen  321 GE---LQCFDMALS  331 (545)
T ss_pred             ce---EEEEEeecC
Confidence            43   556655554

>KOG0299|consensus

Probab=80.19  E-value=84  Score=33.18  Aligned_cols=60  Identities=15%  Similarity=-0.024  Sum_probs=33.8

Q ss_pred             EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      ++..|....++-.+..|.   .+||.+.-.-  .....|.. +.    -.+.+.++.|+++|++++....
T Consensus       386 la~i~~sdL~asGS~~G~---vrLW~i~~g~--r~i~~l~~-ls----~~GfVNsl~f~~sgk~ivagiG  445 (479)
T KOG0299|consen  386 LAVIPGSDLLASGSWSGC---VRLWKIEDGL--RAINLLYS-LS----LVGFVNSLAFSNSGKRIVAGIG  445 (479)
T ss_pred             eEecccCceEEecCCCCc---eEEEEecCCc--cccceeee-cc----cccEEEEEEEccCCCEEEEecc
Confidence            444555553333333343   7888886533  23333322 11    2356778899999998877643

>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]

Probab=80.08  E-value=0.35  Score=49.55  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=33.8

Q ss_pred             hhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhc
Q psy463          646 YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA  689 (790)
Q Consensus       646 ~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~  689 (790)
                      +....+...+..+...|+|++||..|..|+...+..++......
T Consensus       218 ~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~  261 (299)
T COG1073         218 LLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER  261 (299)
T ss_pred             hccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC
Confidence            34444455566666579999999999999999999988876663

>KOG0292|consensus

Probab=80.02  E-value=1.2e+02  Score=35.03  Aligned_cols=246  Identities=13%  Similarity=0.134  Sum_probs=0.0

Q ss_pred             ceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCc
Q psy463           81 NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV  160 (790)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~  160 (790)
                      +..+++.++..+.+-..+............+...+++|--+.++..+   ....+.|      .|+.+.-+...      
T Consensus       338 kd~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlics---~~~n~~y------~L~~ipk~~~~------  402 (1202)
T KOG0292|consen  338 KDRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLICS---NLDNGEY------ELVQIPKDSDG------  402 (1202)
T ss_pred             ccceEEeeeccccccceeEeccCCCcccCCcceeeeccccCeEEEEe---ccCCCeE------EEEEecCcccc------


Q ss_pred             ceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhccc
Q psy463          161 PVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE  240 (790)
Q Consensus       161 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~  240 (790)
                      ....+......-.-.-|-.+++- .++.+.+            ..+-.-++.....++++.|....              
T Consensus       403 ~~~~~~~~k~tG~~a~fvarNrf-avl~k~~------------~~v~ik~l~N~vtkkl~~~~~~~--------------  455 (1202)
T KOG0292|consen  403 VSDGKDVKKGTGEGALFVARNRF-AVLDKSN------------EQVVIKNLKNKVTKKLLLPESTD--------------  455 (1202)
T ss_pred             cCCchhhhcCCCCceEEEEecce-EEEEecC------------cceEEecccchhhhcccCccccc--------------


Q ss_pred             CCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccc
Q psy463          241 KENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQE  320 (790)
Q Consensus       241 ~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~  320 (790)
                                ..-..-+|.++....+.     +.++|+..+....-.....       .....||+|+..++ +.+    
T Consensus       456 ----------~IF~ag~g~lll~~~~~-----v~lfdvQq~~~~~si~~s~-------vkyvvws~dm~~vA-ll~----  508 (1202)
T KOG0292|consen  456 ----------DIFYAGTGNLLLRSPDS-----VTLFDVQQKKKVGSIKVSK-------VKYVVWSNDMSRVA-LLS----  508 (1202)
T ss_pred             ----------ceeeccCccEEEEcCCe-----EEEEEeecceEEEEEecCc-------eeEEEEcCccchhh-hcc----


Q ss_pred             cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC-------CCC-----ceEEEEE
Q psy463          321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ-------GSP-----IVQHMYR  388 (790)
Q Consensus       321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~-------~~~-----~~~~l~~  388 (790)
                               ...|.+.+.+=.       ...-......+.+ -+|+.+|-.||-+.+.       |+.     ....||.
T Consensus       509 ---------Kh~i~i~~kkL~-------l~~sihEtiriks-gawde~gVfiYtT~nHikYal~~GD~GIikTLd~~iyi  571 (1202)
T KOG0292|consen  509 ---------KHTITIADKKLE-------LLCSIHETIRIKS-GAWDEDGVFIYTTLNHIKYALENGDSGIIKTLDKPIYI  571 (1202)
T ss_pred             ---------cceEEEEecchh-------heecchheeEeee-ceeccCceEEEEehhhhhhhhccCCcceEEecccceEE


Q ss_pred             EEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463          389 INIADPTATPECITCDLLTSANQKCSYSGATFST  422 (790)
Q Consensus       389 ~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~  422 (790)
                      ..+.+  +.+-||-.        .+....+.+.|
T Consensus       572 tkv~g--n~V~cl~r--------d~~~~~~~IDp  595 (1202)
T KOG0292|consen  572 TKVKG--NKVFCLNR--------DGEIECLTIDP  595 (1202)
T ss_pred             EEeeC--CEEEEEec--------CCCeEEEeech

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	790
1z68_A	719	Crystal Structure Of Human Fibroblast Activation Pr		5e-79
1z68_A	719	Crystal Structure Of Human Fibroblast Activation Pr		5e-20
1orv_A	728	Crystal Structure Of Porcine Dipeptidyl Peptidase I		4e-74
1orv_A	728	Crystal Structure Of Porcine Dipeptidyl Peptidase I		8e-20
3qbj_A	748	Crystal Structure Of Dipeptidyl Peptidase Iv In Com		1e-72
3qbj_A	748	Crystal Structure Of Dipeptidyl Peptidase Iv In Com		7e-19
1r9m_A	733	Crystal Structure Of Human Dipeptidyl Peptidase Iv		1e-72
1r9m_A	733	Crystal Structure Of Human Dipeptidyl Peptidase Iv		8e-19
3nox_A	753	Crystal Structure Of Human Dpp-Iv In Complex With S		2e-72
3nox_A	753	Crystal Structure Of Human Dpp-Iv In Complex With S		7e-19
2qjr_A	748	Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf		2e-72
2qjr_A	748	Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf		7e-19
2rip_A	729	Structure Of Dppiv In Complex With An Inhibitor Len		2e-72
2rip_A	729	Structure Of Dppiv In Complex With An Inhibitor Len		7e-19
1n1m_A	728	Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A		2e-72
1n1m_A	728	Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A		7e-19
2rgu_A	734	Crystal Structure Of Complex Of Human Dpp4 And Inhi		2e-72
2rgu_A	734	Crystal Structure Of Complex Of Human Dpp4 And Inhi		7e-19
1x70_A	728	Human Dipeptidyl Peptidase Iv In Complex With A Bet		2e-72
1x70_A	728	Human Dipeptidyl Peptidase Iv In Complex With A Bet		8e-19
3q8w_A	732	A B-Aminoacyl Containing Thiazolidine Derivative An		2e-72
3q8w_A	732	A B-Aminoacyl Containing Thiazolidine Derivative An		8e-19
2g5p_A	726	Crystal Structure Of Human Dipeptidyl Peptidase Iv		2e-72
2g5p_A	726	Crystal Structure Of Human Dipeptidyl Peptidase Iv		8e-19
1pfq_A	731	Crystal Structure Of Human Apo Dipeptidyl Peptidase		2e-72
1pfq_A	731	Crystal Structure Of Human Apo Dipeptidyl Peptidase		8e-19
1j2e_A	740	Crystal Structure Of Human Dipeptidyl Peptidase Iv		2e-72
1j2e_A	740	Crystal Structure Of Human Dipeptidyl Peptidase Iv		8e-19
2jid_A	736	Human Dipeptidyl Peptidase Iv In Complex With 1-(3,		2e-72
2jid_A	736	Human Dipeptidyl Peptidase Iv In Complex With 1-(3,		7e-19
2onc_A	731	Crystal Structure Of Human Dpp-4 Length = 731		2e-72
2onc_A	731	Crystal Structure Of Human Dpp-4 Length = 731		8e-19
2bgr_A	738	Crystal Structure Of Hiv-1 Tat Derived Nonapeptides		2e-72
2bgr_A	738	Crystal Structure Of Hiv-1 Tat Derived Nonapeptides		7e-19
3ccb_A	740	Crystal Structure Of Human Dpp4 In Complex With A B		2e-72
3ccb_A	740	Crystal Structure Of Human Dpp4 In Complex With A B		8e-19
1r9n_A	739	Crystal Structure Of Human Dipeptidyl Peptidase Iv		2e-72
1r9n_A	739	Crystal Structure Of Human Dipeptidyl Peptidase Iv		8e-19
2qt9_A	766	Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A		2e-72
2qt9_A	766	Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A		7e-19
4a5s_A	740	Crystal Structure Of Human Dpp4 In Complex With A N		4e-72
4a5s_A	740	Crystal Structure Of Human Dpp4 In Complex With A N		8e-19
1u8e_A	728	Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F Leng		5e-72
1u8e_A	728	Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F Leng		8e-19
2gbc_A	730	Native Dpp-Iv (Cd26) From Rat Length = 730		1e-71
2gbc_A	730	Native Dpp-Iv (Cd26) From Rat Length = 730		1e-19
1xfd_A	723	Structure Of A Human A-Type Potassium Channel Accel		3e-61
1xfd_A	723	Structure Of A Human A-Type Potassium Channel Accel		2e-09
2ecf_A	741	Crystal Structure Of Dipeptidyl Aminopeptidase Iv F		3e-38
2ecf_A	741	Crystal Structure Of Dipeptidyl Aminopeptidase Iv F		1e-09
2d5l_A	706	Crystal Structure Of Prolyl Tripeptidyl Aminopeptid		4e-37
2d5l_A	706	Crystal Structure Of Prolyl Tripeptidyl Aminopeptid		5e-05
2dcm_A	706	The Crystal Structure Of S603a Mutated Prolyl Tripe		9e-37
2dcm_A	706	The Crystal Structure Of S603a Mutated Prolyl Tripe		5e-05
2z3w_A	706	Prolyl Tripeptidyl Aminopeptidase Mutant E636a Leng		1e-36
2z3w_A	706	Prolyl Tripeptidyl Aminopeptidase Mutant E636a Leng		8e-05
2qr5_A	582	Aeropyrum Pernix Acylaminoacyl Peptidase, H367a Mut		6e-04
1ve6_A	582	Crystal Structure Of An Acylpeptide HydrolaseESTERA		6e-04
2qzp_A	562	Crystal Structure Of Mutation Of An Acylptide Hydro		7e-04

>pdb|1Z68|A Chain A, Crystal Structure Of Human Fibroblast Activation Protein Alpha Length = 719

Iteration: 1
 Score =  292 bits (747), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 206/622 (33%), Positives = 316/622 (50%), Gaps = 74/622 (11%)
Query: 110 PFDHLRFSSDGKKMLLILSHN---QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR 166
           P  +L +S  G K+  +  +N   ++  G  P      +TF   +++  I + +P  +  
Sbjct: 111 PIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPF----QITFNGRENK--IFNGIPDWVYE 164
Query: 167 GRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT 226
                T+   W          L++ + +D   PV ++ +      D+Q      +P P  
Sbjct: 165 EEMLATKYALWWSPNGK---FLAYAEFNDTDIPVIAYSYYG----DEQYPRTINIPYPKA 217
Query: 227 RGRFTVTEILAWDE--------KENNVEPVL-------SRVNWA-NESVVAAWVNRVQNR 270
             +  V  I   D         +E  V  ++       S + W  +E V   W+ RVQN 
Sbjct: 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNV 277
Query: 271 ARITRCSINE--GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328
           + ++ C   E   T D   ++          +H+  S  G      +        STPV 
Sbjct: 278 SVLSICDFREDWQTWDCPKTQ----------EHIEESRTGWAGGFFV--------STPVF 319
Query: 329 SWDHLTFIDL-DDQAG------IKDKV--PVPLTRGRFTVTEILAWDEKENNVYFLSTQG 379
           S+D +++  +  D+ G      IKD V   + +T G++    I      ++++++ S + 
Sbjct: 320 SYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFR--VTQDSLFYSSNEF 377
Query: 380 S--PIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIP 437
              P  +++YRI+I     + +C+TC L     ++C Y  A+FS    YY L C GPGIP
Sbjct: 378 EEYPGRRNIYRISIGSYPPSKKCVTCHL---RKERCQYYTASFSDYAKYYALVCYGPGIP 434
Query: 438 EIMLFD-KTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTS 496
              L D +T Q +   + N++L  AL NI LP  E   + +   +    K+ LPP  D S
Sbjct: 435 ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVD-EITLWYKMILPPQFDRS 493
Query: 497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGY 556
             KKYPLLI VYGGP S  V   F+V+W  YLA  + +V+A +DGR +A +G+ L YA Y
Sbjct: 494 --KKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVY 551
Query: 557 RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISV 616
           R+LG  E+ DQI   R   E + +ID+ R AIWGWSYGGY + LALA   + +FKCGI+V
Sbjct: 552 RKLGVYEVEDQITAVRKFIE-MGFIDEKRIAIWGWSYGGYVSSLALA-SGTGLFKCGIAV 609
Query: 617 APVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHF 676
           APV+ W YY ++Y+ER+MGLPT +DNLE YK + +  + +  R+  YLL+HGT DDNVHF
Sbjct: 610 APVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHF 669
Query: 677 QQSMMLAKSLQHADIMFQSQRY 698
           Q S  +AK+L +A + FQ+  Y
Sbjct: 670 QNSAQIAKALVNAQVDFQAMWY 691

>pdb|1Z68|A Chain A, Crystal Structure Of Human Fibroblast Activation Protein Alpha Length = 719

Iteration: 1
 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++R+MGLPT +DNLE YK + +  + +  R+  YLL+HGT DDNVHFQ S  +AK+L +A
Sbjct: 623 TERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNA 682
Query: 755 DIMFQSQTYPDEEHGLIGVRP-HFYHTLERFLDSCFA 790
            + FQ+  Y D+ HGL G+   H Y  +  FL  CF+
Sbjct: 683 QVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCFS 719

>pdb|1ORV|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv (Cd26) Length = 728

Iteration: 1
 Score =  276 bits (705), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 170/463 (36%), Positives = 248/463 (53%), Gaps = 40/463 (8%)
Query: 249 LSRVNWANESVVA-AWVNRVQNRARITRCSINEGTCDVVFSRDLDR------GW---FEP 298
           L  V W  E  ++  W+ R QN + I  C  +E T   + S           GW   F P
Sbjct: 262 LCGVTWVTEERISLQWIRRAQNYSIIDICDYDESTGRWISSVARQHIEISTTGWVGRFRP 321
Query: 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT 358
            +   F+SDG     I+S+ +          + H+     D            +T+G + 
Sbjct: 322 AEP-HFTSDGNSFYKIISNEE---------GYKHICHFQTDKSNC------TFITKGAWE 365
Query: 359 VTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYS 416
           V  I A     + +Y++S +  G P  +++YRI + D T    C++C+L     ++C Y 
Sbjct: 366 VIGIEAL--TSDYLYYISNEHKGMPGGRNLYRIQLNDYTKVT-CLSCEL---NPERCQYY 419
Query: 417 GATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR-LLYWDTNEDLRTALTNITLPSVEYMSV 475
            A+FS    YY L C GPG+P   L   +  + L   + N  L   L ++ +PS +   +
Sbjct: 420 SASFSNKAKYYQLRCFGPGLPLYTLHSSSSDKELRVLEDNSALDKMLQDVQMPSKKLDVI 479
Query: 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV 535
            +    +   ++ LPP  D S  KKYPLLI VY GP S +V   F + W  YLA  ++I+
Sbjct: 480 NLH-GTKFWYQMILPPHFDKS--KKYPLLIEVYAGPCSQKVDTVFRLSWATYLASTENII 536
Query: 536 VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595
           VA  DGR S  +G+ + +A  RRLGT E+ DQI  TR   + + ++D  R AIWGWSYGG
Sbjct: 537 VASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEATRQFSK-MGFVDDKRIAIWGWSYGG 595
Query: 596 YATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV 655
           Y T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++ 
Sbjct: 596 YVTSMVLGAG-SGVFKCGIAVAPVSKWEYYDSVYTERYMGLPTPEDNLDYYRNSTVMSRA 654
Query: 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           +  +  +YLL+HGT DDNVHFQQS  L+K+L  A + FQ+  Y
Sbjct: 655 ENFKQVEYLLIHGTADDNVHFQQSAQLSKALVDAGVDFQTMWY 697

>pdb|1ORV|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv (Cd26) Length = 728

Iteration: 1
 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  L+K+L  A
Sbjct: 629 TERYMGLPTPEDNLDYYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQLSKALVDA 688
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  FL  CF+
Sbjct: 689 GVDFQTMWYTDEDHGIASNMAHQHIYTHMSHFLKQCFS 726

>pdb|3QBJ|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex With Inhibitor Length = 748

Iteration: 1
 Score =  271 bits (692), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 270 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 329
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 330 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 374
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 375 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 428
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 429 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 485
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 486 FIILAETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 543
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 544 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 602
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 603 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 661
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 662 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 705

>pdb|3QBJ|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex With Inhibitor Length = 748

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 637 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 696
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 697 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 734

>pdb|1R9M|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1 Ang. Resolution. Length = 733

Iteration: 1
 Score =  271 bits (692), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/464 (36%), Positives = 252/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 267 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 326
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S N+E         + H+ +  +D       K    +T+G + V
Sbjct: 327 SEPHFTLDGNSFYKIIS-NEEG--------YRHICYFQIDK------KDCTFITKGTWEV 371
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 372 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 425
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 426 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 482
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 483 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 540
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 541 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 599
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 600 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 658
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 659 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 702

>pdb|1R9M|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1 Ang. Resolution. Length = 733

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 634 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 693
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 694 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 731

>pdb|3NOX|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With Sa-(+)-(6- (Aminomethyl)-5-(2,4-Dichlorophenyl)-7-Methylimidazo[1, 2-A]pyrimidin- 2-Yl)(Morpholino)methanone Length = 753

Iteration: 1
 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 264 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 323
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 324 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 368
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 369 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 422
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 423 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 479
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 480 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 537
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 538 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 596
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 597 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 655
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 656 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 699

>pdb|3NOX|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With Sa-(+)-(6- (Aminomethyl)-5-(2,4-Dichlorophenyl)-7-Methylimidazo[1, 2-A]pyrimidin- 2-Yl)(Morpholino)methanone Length = 753

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 631 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 690
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 691 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 728

>pdb|2QJR|A Chain A, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf Length = 748

Iteration: 1
 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 270 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 329
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 330 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 374
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 375 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 428
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 429 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 485
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 486 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 543
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 544 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 602
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 603 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 661
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 662 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 705

>pdb|2QJR|A Chain A, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf Length = 748

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 637 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 696
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 697 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 734

>pdb|2RIP|A Chain A, Structure Of Dppiv In Complex With An Inhibitor Length = 729

Iteration: 1
 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 263 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 322
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 323 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 367
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 368 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 421
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 422 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 478
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 479 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 536
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 537 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 595
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 596 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 654
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 655 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 698

>pdb|2RIP|A Chain A, Structure Of Dppiv In Complex With An Inhibitor Length = 729

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 630 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 689
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 690 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 727

>pdb|1N1M|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN INHIBITOR Length = 728

Iteration: 1
 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 322 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 366
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 367 IGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 420
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 421 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 477
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 478 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 535
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 536 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 594
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 595 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 653
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 654 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 697

>pdb|1N1M|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN INHIBITOR Length = 728

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 629 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 688
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 689 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726

>pdb|2RGU|A Chain A, Crystal Structure Of Complex Of Human Dpp4 And Inhibitor Length = 734

Iteration: 1
 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 322 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 366
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 367 IGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 420
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 421 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 477
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 478 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 535
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 536 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 594
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 595 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 653
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 654 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 697

>pdb|2RGU|A Chain A, Crystal Structure Of Complex Of Human Dpp4 And Inhibitor Length = 734

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 629 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 688
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 689 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726

>pdb|1X70|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With A Beta Amino Acid Inhibitor Length = 728

Iteration: 1
 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 322 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 366
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 367 IGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 420
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 421 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 477
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 478 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 535
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 536 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 594
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 595 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 653
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 654 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 697

>pdb|1X70|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With A Beta Amino Acid Inhibitor Length = 728

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 629 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 688
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 689 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726

>pdb|3Q8W|A Chain A, A B-Aminoacyl Containing Thiazolidine Derivative And Dppiv Complex Length = 732

Iteration: 1
 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 322 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 366
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 367 IGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 420
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 421 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 477
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 478 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 535
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 536 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 594
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 595 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 653
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 654 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 697

>pdb|3Q8W|A Chain A, A B-Aminoacyl Containing Thiazolidine Derivative And Dppiv Complex Length = 732

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 629 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 688
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 689 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726

>pdb|2G5P|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv) Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor 21ac Length = 726

Iteration: 1
 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 322 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 366
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 367 IGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 420
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 421 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 477
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 478 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 535
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 536 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 594
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 595 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 653
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 654 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 697

>pdb|2G5P|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv) Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor 21ac Length = 726

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 629 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 688
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 689 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726

>pdb|1PFQ|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv / Cd26 Length = 731

Iteration: 1
 Score =  270 bits (691), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 265 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 324
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 325 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 369
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 370 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 423
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 424 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 480
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 481 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 538
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 539 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 597
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 598 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 656
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 657 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 700

>pdb|1PFQ|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv / Cd26 Length = 731

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 632 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 691
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 692 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 729

>pdb|1J2E|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv Length = 740

Iteration: 1
 Score =  270 bits (690), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 268 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 327
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 328 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 372
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 373 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 426
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 427 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 483
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 484 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 541
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 542 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 600
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 601 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 659
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 660 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 703

>pdb|1J2E|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv Length = 740

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 635 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 694
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 695 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 732

>pdb|2JID|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4- Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine Length = 736

Iteration: 1
 Score =  270 bits (690), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 270 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 329
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 330 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 374
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 375 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 428
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 429 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 485
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 486 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 543
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 544 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 602
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 603 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 661
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 662 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 705

>pdb|2JID|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4- Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine Length = 736

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 637 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 696
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 697 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 734

>pdb|2ONC|A Chain A, Crystal Structure Of Human Dpp-4 Length = 731

Iteration: 1
 Score =  270 bits (690), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 265 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 324
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 325 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 369
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 370 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 423
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 424 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 480
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 481 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 538
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 539 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 597
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 598 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 656
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 657 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 700

>pdb|2ONC|A Chain A, Crystal Structure Of Human Dpp-4 Length = 731

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 632 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 691
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 692 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 729

>pdb|2BGR|A Chain A, Crystal Structure Of Hiv-1 Tat Derived Nonapeptides Tat(1-9) Bound To The Active Site Of Dipeptidyl Peptidase Iv (Cd26) Length = 738

Iteration: 1
 Score =  270 bits (690), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 272 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 331
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 332 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 376
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 377 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 430
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 431 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 487
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 488 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 545
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 546 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 604
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 605 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 663
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 664 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 707

>pdb|2BGR|A Chain A, Crystal Structure Of Hiv-1 Tat Derived Nonapeptides Tat(1-9) Bound To The Active Site Of Dipeptidyl Peptidase Iv (Cd26) Length = 738

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 639 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 698
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 699 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 736

>pdb|3CCB|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Benzimidazole Derivative Length = 740

Iteration: 1
 Score =  270 bits (690), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 274 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 333
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 334 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 378
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 379 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 432
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 433 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 489
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 490 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 547
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 548 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 606
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 607 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 665
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 666 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 709

>pdb|3CCB|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Benzimidazole Derivative Length = 740

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 641 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 700
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 701 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 738

>pdb|1R9N|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution Length = 739

Iteration: 1
 Score =  270 bits (690), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 273 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 332
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 333 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 377
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 378 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 431
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 432 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 488
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 489 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 546
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 547 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 605
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 606 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 664
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 665 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 708

>pdb|1R9N|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution Length = 739

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 640 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 699
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 700 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 737

>pdb|2QT9|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl Cyclohexylalanine Inhibitor Length = 766

Iteration: 1
 Score =  270 bits (690), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 300 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 359
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 360 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 404
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 405 IGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 458
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 459 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 515
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 516 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 573
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 574 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 632
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 633 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 691
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 692 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 735

>pdb|2QT9|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl Cyclohexylalanine Inhibitor Length = 766

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 667 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 726
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 727 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 764

>pdb|4A5S|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Noval Heterocyclic Dpp4 Inhibitor Length = 740

Iteration: 1
 Score =  269 bits (688), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 250/464 (53%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 322 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 366
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I + D T    C++C+L     ++C Y  
Sbjct: 367 IGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVT-CLSCEL---NPERCQYYS 420
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 421 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 477
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I
Sbjct: 478 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENI 535
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 536 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 594
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 595 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 653
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 654 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 697

>pdb|4A5S|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Noval Heterocyclic Dpp4 Inhibitor Length = 740

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 629 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 688
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 689 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726

>pdb|1U8E|A Chain A, Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F Length = 728

Iteration: 1
 Score =  269 bits (687), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 165/464 (35%), Positives = 251/464 (54%), Gaps = 42/464 (9%)
Query: 249 LSRVNWA-NESVVAAWVNRVQNRARITRCSINE--GTCDVVFSRD----LDRGWFEPF-- 299
           L  V WA  E +   W+ R+QN + +  C  +E  G  + + +R        GW   F  
Sbjct: 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               F+ DG     I+S+ +          + H+ +  +D       K    +T+G + V
Sbjct: 322 SEPHFTLDGNSFYKIISNEE---------GYRHICYFQIDK------KDCTFITKGTWEV 366
Query: 360 TEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG 417
             I A     + +Y++S +  G P  +++Y+I ++D T    C++C+L     ++C Y  
Sbjct: 367 IGIEAL--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVT-CLSCEL---NPERCQYYS 420
Query: 418 ATFSTNVSYYVLSCIGPGIPEIML---FDKTGQRLLYWDTNEDLRTALTNITLPSVEYMS 474
            +FS    YY L C GPG+P   L    +  G R+L  + N  L   L N+ +PS + + 
Sbjct: 421 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL--EDNSALDKMLQNVQMPSKK-LD 477
Query: 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI 534
             I    +   ++ LPP  D S  KKYPLL+ V+ GP S +    F ++W  YLA  ++I
Sbjct: 478 FIILNETKFWYQMILPPHFDKS--KKYPLLLDVFAGPCSQKADTVFRLNWATYLASTENI 535
Query: 535 VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           +VA  DGR S  +G+ + +A  RRLGT E+ DQI   R   + + ++D  R AIWGWSYG
Sbjct: 536 IVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYG 594
Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           GY T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++
Sbjct: 595 GYVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSR 653
Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +  +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y
Sbjct: 654 AENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 697

>pdb|1U8E|A Chain A, Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F Length = 728

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L   
Sbjct: 629 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 688
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 689 GVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726

>pdb|2GBC|A Chain A, Native Dpp-Iv (Cd26) From Rat Length = 730

Iteration: 1
 Score =  268 bits (684), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/463 (35%), Positives = 250/463 (53%), Gaps = 37/463 (7%)
Query: 249 LSRVNWANESVVA-AWVNRVQNRARITRCSINEGT----CDVVFS--RDLDRGW---FEP 298
           L  V W +E  ++  W+ R+QN + +  C  ++ T    C            GW   F P
Sbjct: 261 LCDVAWVSEDRISLQWLRRIQNYSVMAICDYDKTTLVWNCPTTQEHIETSATGWCGRFRP 320
Query: 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT 358
            +   F+SDG     I+S           D + H+     D +    ++V   +T+G + 
Sbjct: 321 AEP-HFTSDGSSFYKIVSDK---------DGYKHICQFQKDRKP---EQVCTFITKGAWE 367
Query: 359 VTEILAWDEKENNVYFLSTQGS--PIVQHMYRINIADPTATPECITCDLLTSANQKCSYS 416
           V  I A     + +Y++S +    P  +++Y+I + D T   +C++CDL     ++C Y 
Sbjct: 368 VISIEAL--TSDYLYYISNEYKEMPGGRNLYKIQLTDHT-NKKCLSCDL---NPERCQYY 421
Query: 417 GATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR-LLYWDTNEDLRTALTNITLPSVEYMSV 475
             + S    YY L C GPG+P   L   T Q+ L   + N  L   L ++ +PS + +  
Sbjct: 422 SVSLSKEAKYYQLGCRGPGLPLYTLHRSTDQKELRVLEDNSALDKMLQDVQMPSKK-LDF 480
Query: 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV 535
            +        ++ LPP  D S  KKYPLLI VY GP S +    F ++W  YLA  ++I+
Sbjct: 481 IVLNETRFWYQMILPPHFDKS--KKYPLLIDVYAGPCSQKADAAFRLNWATYLASTENII 538
Query: 536 VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595
           VA  DGR S  +G+ + +A  +RLGT+E+ DQI   R   + + ++D  R AIWGWSYGG
Sbjct: 539 VASFDGRGSGYQGDKIMHAINKRLGTLEVEDQIEAARQFLK-MGFVDSKRVAIWGWSYGG 597
Query: 596 YATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV 655
           Y T + L    S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++ 
Sbjct: 598 YVTSMVLG-SGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRA 656
Query: 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           +  +  +YLL+HGT DDNVHFQQS  ++K+L  A + FQ+  Y
Sbjct: 657 ENFKQVEYLLIHGTADDNVHFQQSAQISKALVDAGVDFQAMWY 699

>pdb|2GBC|A Chain A, Native Dpp-Iv (Cd26) From Rat Length = 730

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L  A
Sbjct: 631 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDA 690
Query: 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            + FQ+  Y DE+HG+       H Y  +  FL  CF+
Sbjct: 691 GVDFQAMWYTDEDHGIASSTAHQHIYSHMSHFLQQCFS 728

>pdb|1XFD|A Chain A, Structure Of A Human A-Type Potassium Channel Accelerating Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase Family Length = 723

Iteration: 1
 Score =  233 bits (595), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 235/463 (50%), Gaps = 33/463 (7%)
Query: 246 EPVLSRVNWANESVVAA-WVNRVQNRARITRCSINEGTCDVVFSRDLDRGWF-----EPF 299
           E  ++ V WA  + VA  W+NR QN + +T C    G C      D    W      EP 
Sbjct: 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC-TKKHEDESEAWLHRQNEEPV 312
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
               FS DG+K   I +  Q   G      + H+T      Q    +     +T G + V
Sbjct: 313 ----FSKDGRKFFFIRAIPQGGRGK-----FYHITVSS--SQPNSSNDNIQSITSGDWDV 361
Query: 360 TEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGAT 419
           T+ILA+DEK N +YFLST+  P  + +Y  N        +C++CDL+    + C+Y  A+
Sbjct: 362 TKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG-NFNRQCLSCDLV----ENCTYFSAS 416
Query: 420 FSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLY-WDTNEDLRTALTNITLPSVEYMSVPIQ 478
           FS ++ +++L C GPG+P + + + T ++ ++  +TNE ++ A+ +  +P VEY  + I 
Sbjct: 417 FSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEID 476
Query: 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAY 538
            +    +++  P     + H  YPLL+ V G P S  V E+F V W   +  +   VV  
Sbjct: 477 -DYNLPMQILKPATFTDTTH--YPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVK 533
Query: 539 IDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYAT 598
            DGR S  +G  L +   RRLG +E  DQ+   R + +   YID+TR A++G  YGGY +
Sbjct: 534 CDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKE-QYIDRTRVAVFGKDYGGYLS 592
Query: 599 GLALALDPSN---VFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV 655
              L     N    F CG +++P+TD+  Y + +SERY+GL   ++    Y++  + ++V
Sbjct: 593 TYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNR--AYEMTKVAHRV 650
Query: 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
             + ++Q+L++H T D+ +HFQ +  L   L      +  Q Y
Sbjct: 651 SALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIY 693

>pdb|1XFD|A Chain A, Structure Of A Human A-Type Potassium Channel Accelerating Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase Family Length = 723

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           S+RY+GL   ++    Y++  + ++V  + ++Q+L++H T D+ +HFQ +  L   L   
Sbjct: 627 SERYLGLHGLDNR--AYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRG 684
Query: 755 DIMFQSQTYPDEEHGLI--GVRPHFYHTLERFLDSCF 789
              +  Q YPDE H      ++ H Y ++  F   CF
Sbjct: 685 KANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 721

>pdb|2ECF|A Chain A, Crystal Structure Of Dipeptidyl Aminopeptidase Iv From Stenotrophomonas Maltophilia Length = 741

Iteration: 1
 Score =  156 bits (395), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 221/493 (44%), Gaps = 63/493 (12%)
Query: 241 KENNVEPVLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPF 299
           KE ++   L+RVNW + + +     +R Q +  +   ++       V + +    W    
Sbjct: 283 KEQDI--YLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLAS-NQQRVLAHETSPTWVPLH 339
Query: 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV 359
           + LRF  DG  +            S+    + HL  ID   +A         LT G ++V
Sbjct: 340 NSLRFLDDGSILW-----------SSERTGFQHLYRIDSKGKAAA-------LTHGNWSV 381
Query: 360 TEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGAT 419
            E+LA DEK    YF +   S     +Y + +      P+ ++        +      A+
Sbjct: 382 DELLAVDEKAGLAYFRAGIESARESQIYAVPLQG--GQPQRLS--------KAPGMHSAS 431
Query: 420 FSTNVSYYVLSCIGPGIP-EIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSV--P 476
           F+ N S YV S      P +I LF   G+++     N+     L +   P   Y     P
Sbjct: 432 FARNASVYVDSWSNNSTPPQIELFRANGEKIATLVEND-----LADPKHPYARYREAQRP 486
Query: 477 IQ--------PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE----RFSVDW 524
           ++                +  P G D +  K+YP+ ++VYGGP+S  VT+    R    +
Sbjct: 487 VEFGTLTAADGKTPLNYSVIKPAGFDPA--KRYPVAVYVYGGPASQTVTDSWPGRGDHLF 544
Query: 525 NLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKT 584
           N YLA  +  VV  +D R +  +G     A Y + GTVE+ DQ+    +L++  P++D  
Sbjct: 545 NQYLA-QQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQ-PWVDPA 602
Query: 585 RTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLE 644
           R  + GWS GGY T + LA   S+ + CG++ APVTDW  YD+ Y+ERYM LP   D   
Sbjct: 603 RIGVQGWSNGGYMTLMLLA-KASDSYACGVAGAPVTDWGLYDSHYTERYMDLPARND--A 659
Query: 645 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP-- 702
           GY+ A +   ++ +R    LL+HG  DDNV F  S  L  +LQ     F+   Y G    
Sbjct: 660 GYREARVLTHIEGLRSP-LLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHG 718
Query: 703 -TFEDNLEGYKIA 714
            +  D L  Y++A
Sbjct: 719 LSGADALHRYRVA 731

>pdb|2ECF|A Chain A, Crystal Structure Of Dipeptidyl Aminopeptidase Iv From Stenotrophomonas Maltophilia Length = 741

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754
           ++RYM LP   D   GY+ A +   ++ +R    LL+HG  DDNV F  S  L  +LQ  
Sbjct: 647 TERYMDLPARND--AGYREARVLTHIEGLRSP-LLLIHGMADDNVLFTNSTSLMSALQKR 703
Query: 755 DIMFQSQTYPDEEHGLIGVRP-HFYHTLERFLDSCF 789
              F+  TYP  +HGL G    H Y   E FL  C 
Sbjct: 704 GQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRCL 739

>pdb|2D5L|A Chain A, Crystal Structure Of Prolyl Tripeptidyl Aminopeptidase From Porphyromonas Gingivalis Length = 706

Iteration: 1
 Score =  153 bits (386), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 214/472 (45%), Gaps = 47/472 (9%)
Query: 246 EPVLSRVNWA-NESVV-AAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR 303
           E  L+ ++W+ +E+++  A VNR QN  ++       G        + D+ + EP   L 
Sbjct: 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316
Query: 304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL 363
           F        +  S           D W+HL   D         ++   +T+G + VT   
Sbjct: 317 FLPGSNNQFIWQSRR---------DGWNHLYLYD------TTGRLIRQVTKGEWEVTNFA 361
Query: 364 AWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTN 423
            +D K   +YF ST+ SP+ +H Y I+I          T DL   +    +      S +
Sbjct: 362 GFDPKGTRLYFESTEASPLERHFYCIDIKGGK------TKDLTPESGMHRT----QLSPD 411
Query: 424 VSYYVLSCIGPGIPEIMLFDKTGQ--RLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNM 481
            S  +     P +P  +     G+    L    N D   A+  I   ++  M+   Q  +
Sbjct: 412 GSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPDTGYAMPEIRTGTI--MAADGQTPL 469
Query: 482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE--RFSVD-WNLYLADNKDIVVAY 538
               KL +P   D +  KKYP++++VYGGP +  VT+  R SV  W++Y+A  K   V  
Sbjct: 470 --YYKLTMPLHFDPA--KKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMA-QKGYAVFT 524
Query: 539 IDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYAT 598
           +D R SA +G   +   +RRLG  E+ DQ+    +L+    ++D  R  + GWSYGG+ T
Sbjct: 525 VDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQ-SWVDADRIGVHGWSYGGFMT 583
Query: 599 GLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRI 658
              L L   +VFK G++  PV DW  Y+ +Y ERY   P  ++N EGY  A L  +   +
Sbjct: 584 -TNLMLTHGDVFKVGVAGGPVIDWNRYEIMYGERYFDAP--QENPEGYDAANLLKRAGDL 640
Query: 659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG 710
           + +  +L+HG +D  V +Q S++   +   A        Y   P+ E N+ G
Sbjct: 641 KGR-LMLIHGAIDPVVVWQHSLLFLDACVKARTY---PDYYVYPSHEHNVMG 688

>pdb|2D5L|A Chain A, Crystal Structure Of Prolyl Tripeptidyl Aminopeptidase From Porphyromonas Gingivalis Length = 706

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 690 DIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAK 749
           +IM+  +RY   P  ++N EGY  A L  +   ++ +  +L+HG +D  V +Q S++   
Sbjct: 610 EIMY-GERYFDAP--QENPEGYDAANLLKRAGDLKGR-LMLIHGAIDPVVVWQHSLLFLD 665
Query: 750 SLQHADIMFQSQTYPDEEHGLIGV-RPHFYHTLERFL 785
           +   A        YP  EH ++G  R H Y T+ R+ 
Sbjct: 666 ACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYF 702

>pdb|2DCM|A Chain A, The Crystal Structure Of S603a Mutated Prolyl Tripeptidyl Aminopeptidase Complexed With Substrate Length = 706

Iteration: 1
 Score =  152 bits (383), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 214/472 (45%), Gaps = 47/472 (9%)
Query: 246 EPVLSRVNWA-NESVV-AAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR 303
           E  L+ ++W+ +E+++  A VNR QN  ++       G        + D+ + EP   L 
Sbjct: 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316
Query: 304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL 363
           F        +  S           D W+HL   D         ++   +T+G + VT   
Sbjct: 317 FLPGSNNQFIWQSRR---------DGWNHLYLYD------TTGRLIRQVTKGEWEVTNFA 361
Query: 364 AWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTN 423
            +D K   +YF ST+ SP+ +H Y I+I          T DL   +    +      S +
Sbjct: 362 GFDPKGTRLYFESTEASPLERHFYCIDIKGGK------TKDLTPESGMHRT----QLSPD 411
Query: 424 VSYYVLSCIGPGIPEIMLFDKTGQ--RLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNM 481
            S  +     P +P  +     G+    L    N D   A+  I   ++  M+   Q  +
Sbjct: 412 GSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPDTGYAMPEIRTGTI--MAADGQTPL 469
Query: 482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE--RFSVD-WNLYLADNKDIVVAY 538
               KL +P   D +  KKYP++++VYGGP +  VT+  R SV  W++Y+A  K   V  
Sbjct: 470 --YYKLTMPLHFDPA--KKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMA-QKGYAVFT 524
Query: 539 IDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYAT 598
           +D R SA +G   +   +RRLG  E+ DQ+    +L+    ++D  R  + GW+YGG+ T
Sbjct: 525 VDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQ-SWVDADRIGVHGWAYGGFMT 583
Query: 599 GLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRI 658
              L L   +VFK G++  PV DW  Y+ +Y ERY   P  ++N EGY  A L  +   +
Sbjct: 584 -TNLMLTHGDVFKVGVAGGPVIDWNRYEIMYGERYFDAP--QENPEGYDAANLLKRAGDL 640
Query: 659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG 710
           + +  +L+HG +D  V +Q S++   +   A        Y   P+ E N+ G
Sbjct: 641 KGR-LMLIHGAIDPVVVWQHSLLFLDACVKARTY---PDYYVYPSHEHNVMG 688

>pdb|2DCM|A Chain A, The Crystal Structure Of S603a Mutated Prolyl Tripeptidyl Aminopeptidase Complexed With Substrate Length = 706

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 690 DIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAK 749
           +IM+  +RY   P  ++N EGY  A L  +   ++ +  +L+HG +D  V +Q S++   
Sbjct: 610 EIMY-GERYFDAP--QENPEGYDAANLLKRAGDLKGR-LMLIHGAIDPVVVWQHSLLFLD 665
Query: 750 SLQHADIMFQSQTYPDEEHGLIGV-RPHFYHTLERFL 785
           +   A        YP  EH ++G  R H Y T+ R+ 
Sbjct: 666 ACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYF 702

>pdb|2Z3W|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a Length = 706

Iteration: 1
 Score =  151 bits (382), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 213/472 (45%), Gaps = 47/472 (9%)
Query: 246 EPVLSRVNWA-NESVV-AAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR 303
           E  L+ ++W+ +E+++  A VNR QN  ++       G        + D+ + EP   L 
Sbjct: 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316
Query: 304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL 363
           F        +  S           D W+HL   D         ++   +T+G + VT   
Sbjct: 317 FLPGSNNQFIWQSRR---------DGWNHLYLYD------TTGRLIRQVTKGEWEVTNFA 361
Query: 364 AWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTN 423
            +D K   +YF ST+ SP+ +H Y I+I          T DL   +    +      S +
Sbjct: 362 GFDPKGTRLYFESTEASPLERHFYCIDIKGGK------TKDLTPESGMHRT----QLSPD 411
Query: 424 VSYYVLSCIGPGIPEIMLFDKTGQ--RLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNM 481
            S  +     P +P  +     G+    L    N D   A+  I   ++  M+   Q  +
Sbjct: 412 GSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPDTGYAMPEIRTGTI--MAADGQTPL 469
Query: 482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE--RFSVD-WNLYLADNKDIVVAY 538
               KL +P   D +  KKYP++++VYGGP +  VT+  R SV  W++Y+A  K   V  
Sbjct: 470 --YYKLTMPLHFDPA--KKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMA-QKGYAVFT 524
Query: 539 IDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYAT 598
           +D R SA +G   +   +RRLG  E+ DQ+    +L+    ++D  R  + GWSYGG+ T
Sbjct: 525 VDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQ-SWVDADRIGVHGWSYGGFMT 583
Query: 599 GLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRI 658
              L L   +VFK G++  PV DW  Y  +Y ERY   P  ++N EGY  A L  +   +
Sbjct: 584 -TNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFDAP--QENPEGYDAANLLKRAGDL 640
Query: 659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG 710
           + +  +L+HG +D  V +Q S++   +   A        Y   P+ E N+ G
Sbjct: 641 KGR-LMLIHGAIDPVVVWQHSLLFLDACVKARTY---PDYYVYPSHEHNVMG 688

>pdb|2Z3W|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a Length = 706

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 691 IMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKS 750
           IM+  +RY   P  ++N EGY  A L  +   ++ +  +L+HG +D  V +Q S++   +
Sbjct: 611 IMY-GERYFDAP--QENPEGYDAANLLKRAGDLKGR-LMLIHGAIDPVVVWQHSLLFLDA 666
Query: 751 LQHADIMFQSQTYPDEEHGLIGV-RPHFYHTLERFL 785
              A        YP  EH ++G  R H Y T+ R+ 
Sbjct: 667 CVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYF 702

>pdb|2QR5|A Chain A, Aeropyrum Pernix Acylaminoacyl Peptidase, H367a Mutant Length = 582

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 588 IWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYK 647
           I G+SYGGY T  AL + P  +FK G++ A V DW   + +Y         F + L G  
Sbjct: 441 IMGYSYGGYMTLCALTMKP-GLFKAGVAGASVVDW---EEMYELSDAAFRNFIEQLTGGS 496
Query: 648 IAALN-----NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQ 696
              +      N VDRI++    L+H   D     +  + L   L      F++ 
Sbjct: 497 REIMRSRSPINHVDRIKEP-LALIHPQNDSRTPLKPLLRLMGELLARGKTFEAH 549

>pdb|1VE6|A Chain A, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM Aeropyrum Pernix K1 Length = 582

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 588 IWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYK 647
           I G+SYGGY T  AL + P  +FK G++ A V DW   + +Y         F + L G  
Sbjct: 441 IMGYSYGGYMTLCALTMKP-GLFKAGVAGASVVDW---EEMYELSDAAFRNFIEQLTGGS 496
Query: 648 IAALN-----NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQ 696
              +      N VDRI++    L+H   D     +  + L   L      F++ 
Sbjct: 497 REIMRSRSPINHVDRIKEP-LALIHPQNDSRTPLKPLLRLMGELLARGKTFEAH 549

>pdb|2QZP|A Chain A, Crystal Structure Of Mutation Of An Acylptide HydrolaseESTERASE FROM AEROPYRUM PERNIX K1 Length = 562

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 588 IWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYK 647
           I G+SYGGY T  AL + P  +FK G++ A V DW   + +Y         F + L G  
Sbjct: 421 IMGYSYGGYMTLCALTMKP-GLFKAGVAGASVVDW---EEMYELSDAAFRNFIEQLTGGS 476
Query: 648 IAALN-----NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQ 696
              +      N VDRI++    L+H   D     +  + L   L      F++ 
Sbjct: 477 REIMRSRSPINHVDRIKEP-LALIHPQNDSRTPLKPLLRLMGELLARGKTFEAH 529

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	790
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	1e-147
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	1e-31
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	8e-24
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	1e-142
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	2e-29
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	2e-25
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	1e-140
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	1e-30
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	6e-21
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	1e-136
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	3e-27
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	3e-26
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	1e-135
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	1e-27
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	2e-24
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	1e-28
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	2e-28
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	4e-05
3ksr_A	290	Putative serine hydrolase; catalytic triad, struct	2e-23
3ksr_A	290	Putative serine hydrolase; catalytic triad, struct	9e-07
3doh_A	380	Esterase; alpha-beta hydrolase, beta sheet; 2.60A	9e-21
3doh_A	380	Esterase; alpha-beta hydrolase, beta sheet; 2.60A	8e-05
3fcy_A	346	Xylan esterase 1; alpha/beta hydrolase, carbohydra	1e-15
2jbw_A	386	Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine	1e-15
1l7a_A	318	Cephalosporin C deacetylase; structural genomics,	7e-15
3g8y_A	391	SUSD/RAGB-associated esterase-like protein; struct	2e-12
3mve_A	415	FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/	3e-12
1vlq_A	337	Acetyl xylan esterase; TM0077, structural genomics	4e-12
2wtm_A	251	EST1E; hydrolase; 1.60A {Clostridium proteoclastic	5e-12
3fnb_A	405	Acylaminoacyl peptidase SMU_737; alpha-beta-alpha	5e-12
1ufo_A	238	Hypothetical protein TT1662; alpha-beta fold, hydr	1e-11
3k2i_A	422	Acyl-coenzyme A thioesterase 4; alpha/beta hydrola	2e-11
3nuz_A	398	Putative acetyl xylan esterase; structural genomic	2e-10
3hlk_A	446	Acyl-coenzyme A thioesterase 2, mitochondrial; alp	2e-10
3hxk_A	276	Sugar hydrolase; alpha-beta protein., structural g	1e-07
4e15_A	303	Kynurenine formamidase; alpha/beta hydrolase fold,	2e-07
3bjr_A	283	Putative carboxylesterase; structural genomics, jo	3e-07
3guu_A	462	Lipase A; protein structure, hydrolase; HET: 1PE;	1e-06
3h2g_A	397	Esterase; xanthomonas oryzae PV. oryzae, cell WALL	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
3pfb_A	270	Cinnamoyl esterase; alpha/beta hydrolase fold, hyd	1e-05
2hdw_A	367	Hypothetical protein PA2218; alpha/beta hydrolase	4e-05
3bxp_A	277	Putative lipase/esterase; putative carboxylesteras	4e-05
3h04_A	275	Uncharacterized protein; protein with unknown func	9e-05
1jjf_A	268	Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x	1e-04
4ezi_A	377	Uncharacterized protein; alpha-beta hydrolases fol	2e-04
3gff_A	331	IROE-like serine hydrolase; NP_718593.1, structura	4e-04
2pbl_A	262	Putative esterase/lipase/thioesterase; alpha/beta-	5e-04

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} Length = 719

 Score =  448 bits (1155), Expect = e-147
 Identities = 171/486 (35%), Positives = 249/486 (51%), Gaps = 33/486 (6%)

Query: 223 VPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANES-VVAAWVNRVQNRARITRCSINEG 281
           +  T   +   + +       + +   S + W  +  V   W+ RVQN + ++ C   E 
Sbjct: 229 IDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFRED 288

Query: 282 TCDVVFSR------DLDRGWFEPFD--HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHL 333
                  +      +   GW   F      FS D      I S   + DG      + H+
Sbjct: 289 WQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFS---DKDG------YKHI 339

Query: 334 TFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393
            +I          +  + +T G++    I    +          +  P  +++YRI+I  
Sbjct: 340 HYIKDTV------ENAIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGS 393

Query: 394 PTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIP-EIMLFDKTGQRLLYW 452
              + +C+TC L      +C Y  A+FS    YY L C GPGIP   +   +T Q +   
Sbjct: 394 YPPSKKCVTCHLRKE---RCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKIL 450

Query: 453 DTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPS 512
           + N++L  AL NI LP  E   + +   +    K+ LPP  D S  KKYPLLI VYGGP 
Sbjct: 451 EENKELENALKNIQLPKEEIKKLEV-DEITLWYKMILPPQFDRS--KKYPLLIQVYGGPC 507

Query: 513 SFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTR 572
           S  V   F+V+W  YLA  + +V+A +DGR +A +G+ L YA YR+LG  E+ DQI   R
Sbjct: 508 SQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVR 567

Query: 573 YLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSER 632
              E + +ID+ R AIWGWSYGGY + LALA     +FKCGI+VAPV+ W YY ++Y+ER
Sbjct: 568 KFIE-MGFIDEKRIAIWGWSYGGYVSSLALASGT-GLFKCGIAVAPVSSWEYYASVYTER 625

Query: 633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM 692
           +MGLPT +DNLE YK + +  + +  R+  YLL+HGT DDNVHFQ S  +AK+L +A + 
Sbjct: 626 FMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVD 685

Query: 693 FQSQRY 698
           FQ+  Y
Sbjct: 686 FQAMWY 691

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} Length = 719

 Score =  131 bits (330), Expect = 1e-31
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 697 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI 756
           R+MGLPT +DNLE YK + +  + +  R+  YLL+HGT DDNVHFQ S  +AK+L +A +
Sbjct: 625 RFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQV 684

Query: 757 MFQSQTYPDEEHGLIGV-RPHFYHTLERFLDSCFA 790
            FQ+  Y D+ HGL G+   H Y  +  FL  CF+
Sbjct: 685 DFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCFS 719

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} Length = 719

 Score =  106 bits (266), Expect = 8e-24
 Identities = 44/221 (19%), Positives = 75/221 (33%), Gaps = 57/221 (25%)

Query: 4   EEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQ-------------- 49
           EE+L++  ALW+SP+G  LAYA F+D    ++   +YG+  +P +               
Sbjct: 165 EEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVV 224

Query: 50  -------------------YTQAINLREPVLSRVNWANES-VVAAWVNRVQNRARITRCS 89
                                  I   +   S + W  +  V   W+ RVQN + ++ C 
Sbjct: 225 RIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284

Query: 90  INEGTCDVVFSR------DLDRGWFEPFD--HLRFSSDGKKMLLILSHNQESDGSTPVDS 141
             E        +      +   GW   F      FS D      I S   + DG      
Sbjct: 285 FREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFS---DKDG------ 335

Query: 142 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEREN 182
           + H+ +I          +  + +T G++    I    +   
Sbjct: 336 YKHIHYIKDT------VENAIQITSGKWEAINIFRVTQDSL 370

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 Length = 723

 Score =  435 bits (1121), Expect = e-142
 Identities = 137/475 (28%), Positives = 223/475 (46%), Gaps = 27/475 (5%)

Query: 231 TVTEILAWDEKENNVEPVLSRVNWANES-VVAAWVNRVQNRARITRCSINEGTCDVVFSR 289
           T    +   +     E  ++ V WA  + V   W+NR QN + +T C    G C      
Sbjct: 239 THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKH-E 297

Query: 290 DLDRGWFEPFDHLR-FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD-K 347
           D    W    +    FS DG+K   I +  Q                I +          
Sbjct: 298 DESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ--------GGRGKFYHITVSSSQPNSSND 349

Query: 348 VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLT 407
               +T G + VT+ILA+DEK N +YFLST+  P  + +Y  N        +C++CDL  
Sbjct: 350 NIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF-NRQCLSCDL-- 406

Query: 408 SANQKCSYSGATFSTNVSYYVLSCIGPGIPE-IMLFDKTGQRLLYWDTNEDLRTALTNIT 466
              + C+Y  A+FS ++ +++L C GPG+P   +      +++   +TNE ++ A+ +  
Sbjct: 407 --VENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLETNEHVKKAINDRQ 464

Query: 467 LPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNL 526
           +P VEY  + I  +    +++  P     +    YPLL+ V G P S  V E+F V W  
Sbjct: 465 MPKVEYRDIEID-DYNLPMQILKPATFTDT--THYPLLLVVDGTPGSQSVAEKFEVSWET 521

Query: 527 YLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRT 586
            +  +   VV   DGR S  +G  L +   RRLG +E  DQ+   R + +   YID+TR 
Sbjct: 522 VMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLK-EQYIDRTRV 580

Query: 587 AIWGWSYGGYATGLALALDP---SNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNL 643
           A++G  YGGY +   L          F CG +++P+TD+  Y + +SERY+GL     + 
Sbjct: 581 AVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLH--GLDN 638

Query: 644 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
             Y++  + ++V  + ++Q+L++H T D+ +HFQ +  L   L      +  Q Y
Sbjct: 639 RAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIY 693

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 Length = 723

 Score =  124 bits (312), Expect = 2e-29
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)

Query: 697 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI 756
           RY+GL     +   Y++  + ++V  + ++Q+L++H T D+ +HFQ +  L   L     
Sbjct: 629 RYLGLH--GLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKA 686

Query: 757 MFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCF 789
            +  Q YPDE H      ++ H Y ++  F   CF
Sbjct: 687 NYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 721

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 Length = 723

 Score =  111 bits (279), Expect = 2e-25
 Identities = 56/213 (26%), Positives = 83/213 (38%), Gaps = 43/213 (20%)

Query: 4   EEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQ---YTQA------- 53
           EE+L +  A W+SP G  LAYA+ +D+R  IM +P Y    +P+ +   Y +A       
Sbjct: 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSI 228

Query: 54  ---------------------INLREPVLSRVNWANES-VVAAWVNRVQNRARITRCSIN 91
                                  +RE  ++ V WA  + V   W+NR QN + +T C   
Sbjct: 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT 288

Query: 92  EGTCDVVFSRDLDRGWFEPFDHLR-FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL 150
            G C      D    W    +    FS DG+K   I +  Q                I +
Sbjct: 289 TGVCTKKH-EDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ--------GGRGKFYHITV 339

Query: 151 DDQAGIKD-KVPVPLTRGRFTVTEILAWDEREN 182
                         +T G + VT+ILA+DE+ N
Sbjct: 340 SSSQPNSSNDNIQSITSGDWDVTKILAYDEKGN 372

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... Length = 740

 Score =  429 bits (1104), Expect = e-140
 Identities = 160/504 (31%), Positives = 243/504 (48%), Gaps = 45/504 (8%)

Query: 205 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWA-NESVVAAW 263
               ++ D  + + +   + +T                   +  L  V WA  E +   W
Sbjct: 229 KFFVVNTDSLSSVTNATSIQIT-----------APASMLIGDHYLCDVTWATQERISLQW 277

Query: 264 VNRVQNRARITRCSINEGTCDV------VFSRDLDRGWFEPF--DHLRFSSDGKKMLLIL 315
           + R+QN + +  C  +E +                 GW   F      F+ DG     I+
Sbjct: 278 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKII 337

Query: 316 SHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFL 375
           S+          + + H+ +        I  K    +T+G + V  I A           
Sbjct: 338 SNE---------EGYRHICYFQ------IDKKDCTFITKGTWEVIGIEALTSDYLYYISN 382

Query: 376 STQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG 435
             +G P  +++Y+I + D T    C++C+L      +C Y   +FS    YY L C GPG
Sbjct: 383 EYKGMPGGRNLYKIQLIDYT-KVTCLSCELNPE---RCQYYSVSFSKEAKYYQLRCSGPG 438

Query: 436 IP-EIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGID 494
           +P   +      + L   + N  L   L N+ +PS +     I    +   ++ LPP  D
Sbjct: 439 LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKL-DFIILNETKFWYQMILPPHFD 497

Query: 495 TSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA 554
            S  KKYPLL+ VY GP S +    F ++W  YLA  ++I+VA  DGR S  +G+ + +A
Sbjct: 498 KS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHA 555

Query: 555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGI 614
             RRLGT E+ DQI   R   + + ++D  R AIWGWSYGGY T + L      VFKCGI
Sbjct: 556 INRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYGGYVTSMVLGSGS-GVFKCGI 613

Query: 615 SVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV 674
           +VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNV
Sbjct: 614 AVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNV 673

Query: 675 HFQQSMMLAKSLQHADIMFQSQRY 698
           HFQQS  ++K+L    + FQ+  Y
Sbjct: 674 HFQQSAQISKALVDVGVDFQAMWY 697

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... Length = 740

 Score =  128 bits (322), Expect = 1e-30
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 697 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI 756
           RYMGLPT EDNL+ Y+ + + ++ +  +  +YLL+HGT DDNVHFQQS  ++K+L    +
Sbjct: 631 RYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGV 690

Query: 757 MFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790
            FQ+  Y DE+HG+       H Y  +  F+  CF+
Sbjct: 691 DFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... Length = 740

 Score = 97.2 bits (242), Expect = 6e-21
 Identities = 49/227 (21%), Positives = 76/227 (33%), Gaps = 68/227 (29%)

Query: 4   EEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREP---- 59
           EEV S+ SALW+SP+G  LAYA F+D    ++   FY +      QY + + +  P    
Sbjct: 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESL---QYPKTVRVPYPKAGA 223

Query: 60  -------------------------------------VLSRVNWA-NESVVAAWVNRVQN 81
                                                 L  V WA  E +   W+ R+QN
Sbjct: 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQN 283

Query: 82  RARITRCSINEGTCDV------VFSRDLDRGWFEPF--DHLRFSSDGKKMLLILSHNQES 133
            + +  C  +E +                 GW   F      F+ DG     I+S+    
Sbjct: 284 YSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE--- 340

Query: 134 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDER 180
                 + + H+ +        I  K    +T+G + V  I A    
Sbjct: 341 ------EGYRHICYFQ------IDKKDCTFITKGTWEVIGIEALTSD 375

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* Length = 706

 Score =  419 bits (1078), Expect = e-136
 Identities = 117/459 (25%), Positives = 197/459 (42%), Gaps = 42/459 (9%)

Query: 246 EPVLSRVNWANES--VVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR 303
           E  L+ ++W+ +   +  A VNR QN  ++       G        + D+ + EP   L 
Sbjct: 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316

Query: 304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL 363
           F        +  S     DG      W+HL   D         ++   +T+G + VT   
Sbjct: 317 FLPGSNNQFIWQS---RRDG------WNHLYLYDTTG------RLIRQVTKGEWEVTNFA 361

Query: 364 AWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTN 423
            +D K   +YF ST+ SP+ +H Y I+I       + +T         +        S +
Sbjct: 362 GFDPKGTRLYFESTEASPLERHFYCIDIKGGK--TKDLT--------PESGMHRTQLSPD 411

Query: 424 VSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNM-E 482
            S  +     P +P  +     G+        ++     T   +P +   ++        
Sbjct: 412 GSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNP---DTGYAMPEIRTGTIMAADGQTP 468

Query: 483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD---WNLYLADNKDIVVAYI 539
              KL +P   D +  KKYP++++VYGGP +  VT+ +      W++Y+A  K   V  +
Sbjct: 469 LYYKLTMPLHFDPA--KKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQ-KGYAVFTV 525

Query: 540 DGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATG 599
           D R SA +G   +   +RRLG  E+ DQ+    +L+    ++D  R  + GWSYGG+ T 
Sbjct: 526 DSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKS-QSWVDADRIGVHGWSYGGFMTT 584

Query: 600 LALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR 659
             +     +VFK G++  PV DW  Y  +Y ERY   P  ++N EGY  A L  +   ++
Sbjct: 585 NLMLTHG-DVFKVGVAGGPVIDWNRYAIMYGERYFDAP--QENPEGYDAANLLKRAGDLK 641

Query: 660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
            +  +L+HG +D  V +Q S++   +   A        Y
Sbjct: 642 GR-LMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVY 679

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* Length = 706

 Score =  117 bits (294), Expect = 3e-27
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 4/94 (4%)

Query: 697 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI 756
           RY   P  ++N EGY  A L  +   ++ +  +L+HG +D  V +Q S++   +   A  
Sbjct: 616 RYFDAP--QENPEGYDAANLLKRAGDLKGR-LMLIHGAIDPVVVWQHSLLFLDACVKART 672

Query: 757 MFQSQTYPDEEHGLIGV-RPHFYHTLERFLDSCF 789
                 YP  EH ++G  R H Y T+ R+     
Sbjct: 673 YPDYYVYPSHEHNVMGPDRVHLYETITRYFTDHL 706

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* Length = 706

 Score =  114 bits (286), Expect = 3e-26
 Identities = 39/207 (18%), Positives = 67/207 (32%), Gaps = 43/207 (20%)

Query: 4   EEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGN------------PGHPSSQY- 50
           +         ++SP G+ LA+   D +      I  Y               G PS    
Sbjct: 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236

Query: 51  ----------TQAINL---REPVLSRVNWANES--VVAAWVNRVQNRARITRCSINEGTC 95
                     T  +     +E  L+ ++W+ +   +  A VNR QN  ++       G  
Sbjct: 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF 296

Query: 96  DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG 155
                 + D+ + EP   L F        +  S     DG      W+HL   D      
Sbjct: 297 VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQS---RRDG------WNHLYLYDTT---- 343

Query: 156 IKDKVPVPLTRGRFTVTEILAWDEREN 182
              ++   +T+G + VT    +D +  
Sbjct: 344 --GRLIRQVTKGEWEVTNFAGFDPKGT 368

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Length = 741

 Score =  417 bits (1073), Expect = e-135
 Identities = 134/472 (28%), Positives = 208/472 (44%), Gaps = 48/472 (10%)

Query: 238 WDEKENNVEPVLSRVNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWF 296
           W +     +  L+RVNW   + +     +R Q +  +   ++      V+   +    W 
Sbjct: 278 WIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA-HETSPTWV 336

Query: 297 EPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR 356
              + LRF  DG   +L  S   E  G      + HL  ID   +          LT G 
Sbjct: 337 PLHNSLRFLDDGS--ILWSS---ERTG------FQHLYRIDSKGK-------AAALTHGN 378

Query: 357 FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYS 416
           ++V E+LA DEK    YF +   S     +Y + +      P+ ++              
Sbjct: 379 WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQ--PQRLSK--------APGMH 428

Query: 417 GATFSTNVSYYVLSCIGPGIP-EIMLFDKTGQRLLYWDTNEDLRTALTNITL----PSVE 471
            A+F+ N S YV S      P +I LF   G+++     N+                 VE
Sbjct: 429 SASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVE 488

Query: 472 YMSVPIQPNM-EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD----WNL 526
           + ++            +  P G D +  K+YP+ ++VYGGP+S  VT+ +       +N 
Sbjct: 489 FGTLTAADGKTPLNYSVIKPAGFDPA--KRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQ 546

Query: 527 YLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRT 586
           YLA  +  VV  +D R +  +G     A Y + GTVE+ DQ+    +L++  P++D  R 
Sbjct: 547 YLAQ-QGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQ-QPWVDPARI 604

Query: 587 AIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGY 646
            + GWS GGY T + LA    + + CG++ APVTDW  YD+ Y+ERYM LP    N  GY
Sbjct: 605 GVQGWSNGGYMTLMLLAKAS-DSYACGVAGAPVTDWGLYDSHYTERYMDLP--ARNDAGY 661

Query: 647 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY 698
           + A +   ++ +R    LL+HG  DDNV F  S  L  +LQ     F+   Y
Sbjct: 662 REARVLTHIEGLRSP-LLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTY 712

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Length = 741

 Score =  118 bits (298), Expect = 1e-27
 Identities = 37/94 (39%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 697 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI 756
           RYM LP    N  GY+ A +   ++ +R    LL+HG  DDNV F  S  L  +LQ    
Sbjct: 649 RYMDLP--ARNDAGYREARVLTHIEGLRSP-LLLIHGMADDNVLFTNSTSLMSALQKRGQ 705

Query: 757 MFQSQTYPDEEHGLIGV-RPHFYHTLERFLDSCF 789
            F+  TYP  +HGL G    H Y   E FL  C 
Sbjct: 706 PFELMTYPGAKHGLSGADALHRYRVAEAFLGRCL 739

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Length = 741

 Score =  107 bits (270), Expect = 2e-24
 Identities = 42/207 (20%), Positives = 74/207 (35%), Gaps = 47/207 (22%)

Query: 4   EEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQY------------- 50
           +E +   +  W++P  + +AYA  D++   +              +              
Sbjct: 205 DEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264

Query: 51  -----------TQAINL---REPVLSRVNWA-NESVVAAWVNRVQNRARITRCSINEGTC 95
                      TQ I+L   ++  L+RVNW   + +     +R Q +  +   ++     
Sbjct: 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQ 324

Query: 96  DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG 155
            V+   +    W    + LRF  DG   +L  S   E  G      + HL  ID   +  
Sbjct: 325 RVLA-HETSPTWVPLHNSLRFLDDGS--ILWSS---ERTG------FQHLYRIDSKGK-- 370

Query: 156 IKDKVPVPLTRGRFTVTEILAWDEREN 182
                   LT G ++V E+LA DE+  
Sbjct: 371 -----AAALTHGNWSVDELLAVDEKAG 392

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A Length = 662

 Score =  121 bits (305), Expect = 1e-28
 Identities = 105/584 (17%), Positives = 180/584 (30%), Gaps = 97/584 (16%)

Query: 143 DHLTFIDLDDQA-------GIKDKVPVPLTRGRFTVTEI----LAWDERENNPLLILSHN 191
             L F    DQ             VP PLT        +                +    
Sbjct: 92  PLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMA--- 148

Query: 192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW--DEKENNVEPVL 249
           +E  G  P D    L  + LD  A         L+              D ++       
Sbjct: 149 EEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQ------A 202

Query: 250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGK 309
             + W +      W       AR+T     +G       R L  G  E      ++ DG 
Sbjct: 203 VWLAWDHPR--MPWEGTELKTARVTE----DGRFADT--RTLLGGPEEAIAQAEWAPDGS 254

Query: 310 KMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR------GRFTVTEIL 363
             L++ +   +  G      W +L  +D    A         L R      G      + 
Sbjct: 255 --LIVAT---DRTG------WWNLHRVDPATGA------ATQLCRREEEFAGPLWTPGMR 297

Query: 364 AWDEKENNVYFLSTQ-GSPIVQHMYRINIAD----PTATPECITCDLLTSANQKCSYSGA 418
            +    N +  +    G+     +  ++         A P       LT +  +     A
Sbjct: 298 WFAPLANGLIAVVHGKGAA---VLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAA 354

Query: 419 TFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQ 478
           +  T      L               TG+       + D    +     P  +  +    
Sbjct: 355 SPRTAYEVVELD------------TVTGRARTIGARHTD---PVDPAYYPEPQIRTFTAP 399

Query: 479 PNMEAQVKLFLPPGIDTSGH--KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVV 536
              E    ++ P   D +G   +  P ++  +GGP+S +V          Y   ++ I V
Sbjct: 400 DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTS-RVPAVLD-LDVAYFT-SRGIGV 456

Query: 537 AYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGY 596
           A ++   S   G   +     R G V++ D   V   L E     D+ R A+ G S GG+
Sbjct: 457 ADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEE-GTADRARLAVRGGSAGGW 515

Query: 597 ATGLALALDPSNVFKCGISVAPVTDWI--------YYDTIYSERYMGLPTFEDNLEGYK- 647
               +L    ++V+ CG  + PV D +         +++ Y +  +G    E+  E Y+ 
Sbjct: 516 TAASSLVS--TDVYACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSF--EEFPERYRD 571

Query: 648 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI 691
            A L    DR+R   +LL+ G  D     +Q     +++    +
Sbjct: 572 RAPLTR-ADRVR-VPFLLLQGLEDPVCPPEQCDRFLEAVAGCGV 613

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Length = 582

 Score =  120 bits (302), Expect = 2e-28
 Identities = 74/452 (16%), Positives = 130/452 (28%), Gaps = 65/452 (14%)

Query: 247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS 306
           P    V+     ++A        R  +   +++ G   V  S +        F     S 
Sbjct: 151 PGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGE------GSFSSASISP 204

Query: 307 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWD 366
             K    + +                L  +D  D +         +        +  ++ 
Sbjct: 205 GMKVTAGLET-----------AREARLVTVDPRDGS---------VEDLELPSKDFSSYR 244

Query: 367 EKENNVYFLSTQGSPIVQHMY----RINIADPTATPECITCDLLTSANQKCSYSGATFST 422
                       G   V         + I              +     K   S  + ST
Sbjct: 245 PTAITWLGYLPDGRLAVVARREGRSAVFIDGERVEAPQGNHGRVVLWRGKLVTSHTSLST 304

Query: 423 NVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNME 482
                 L               +G+ LL     EDLR      ++     + V       
Sbjct: 305 PPRIVSLP--------------SGEPLLEGGLPEDLRR-----SIAGSRLVWVESFDGSR 345

Query: 483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGR 542
               +              P ++ V+GGP + + ++ +   +   LA      V   + R
Sbjct: 346 VPTYVLESGR----APTPGPTVVLVHGGPFA-EDSDSWD-TFAASLA-AAGFHVVMPNYR 398

Query: 543 NSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLAL 602
            S   G   +          E+ D     R+ +E+          I G+SYGGY T  AL
Sbjct: 399 GSTGYGEEWRLKIIGDPCGGELEDVSAAARWARES-GLAS--ELYIMGYSYGGYMTLCAL 455

Query: 603 ALDPSNVFKCGISVAPVTDWI--YYDTIYSERYMGLPTFEDNLEGY-KIAALNNKVDRIR 659
            + P  +FK G++ A V DW   Y  +  + R         + E     + +N+ VDRI+
Sbjct: 456 TMKP-GLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREIMRSRSPINH-VDRIK 513

Query: 660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI 691
            +   L+H         +  + L   L     
Sbjct: 514 -EPLALIHPQNASRTPLKPLLRLMGELLARGK 544

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Length = 582

 Score = 46.0 bits (109), Expect = 4e-05
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 3/71 (4%)

Query: 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGV--RP 775
           N VDRI+ +   L+H         +  + L   L      F++   PD  H +  +    
Sbjct: 507 NHVDRIK-EPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAV 565

Query: 776 HFYHTLERFLD 786
                   FL 
Sbjct: 566 KILLPAVFFLA 576

>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290

 Score =  100 bits (250), Expect = 2e-23
 Identities = 32/193 (16%), Positives = 54/193 (27%), Gaps = 15/193 (7%)

Query: 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR 558
              P ++ V+G   S    +  S+            +    D R      +  +     +
Sbjct: 26  TGMPGVLFVHGWGGS----QHHSLVRAREAV-GLGCICMTFDLRGHEGYASMRQSVTRAQ 80

Query: 559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP 618
                + D       L   LPY+D    A+ G SYGGY + L     P  V    +    
Sbjct: 81  ----NLDDIKAAYDQLAS-LPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPA 133

Query: 619 VTDWIYYDTIYSERYM--GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHF 676
           +    ++D           L  +                 + +    LLV    D  V  
Sbjct: 134 LYKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYK-GDVLLVEAENDVIVPH 192

Query: 677 QQSMMLAKSLQHA 689
                 A +  +A
Sbjct: 193 PVMRNYADAFTNA 205

>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290

 Score = 50.2 bits (120), Expect = 9e-07
 Identities = 12/60 (20%), Positives = 19/60 (31%), Gaps = 3/60 (5%)

Query: 729 LLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGV--RPHFYHTLERFLD 786
           LLV    D  V        A +  +A     S+     +H L     +  +   L  +L 
Sbjct: 180 LLVEAENDVIVPHPVMRNYADAFTNARS-LTSRVIAGADHALSVKEHQQEYTRALIDWLT 238

>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A Length = 380

 Score = 94.4 bits (234), Expect = 9e-21
 Identities = 49/350 (14%), Positives = 98/350 (28%), Gaps = 54/350 (15%)

Query: 349 PVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTS 408
              L+  +F+V            +  +    S        ++ +      + +  +L T 
Sbjct: 35  GQKLSPDQFSVKVKTGDTYSSRTITKVYANNSG------GLSFSIFNNRGKYVVLELSTE 88

Query: 409 ANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLP 468
                +        N    +   +   +P   +FD  G  +  + + +     L      
Sbjct: 89  DLHSNTIVFGPNFLNTRMKLDYIVSQLVP---IFDVDGNEVEPFTSKQTDEKHLIIDDFL 145

Query: 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTER--------F 520
           +  +     +  +E   +LF+P  ++    +KYPL++ ++G                   
Sbjct: 146 AFTFKDP--ETGVEIPYRLFVPKDVNPD--RKYPLVVFLHGAGERGTDNYLQVAGNRGAV 201

Query: 521 SVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY 580
                 Y   +   V+       ++                  +   I + R L +    
Sbjct: 202 VWAQPRYQVVHPCFVL-APQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDE-YN 259

Query: 581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFE 640
           ID+ R  I G S GGY T     ++   +F   I +    D         ER   +P   
Sbjct: 260 IDENRIYITGLSMGGYGT-WTAIMEFPELFAAAIPICGGGDVSKV-----ERIKDIPI-- 311

Query: 641 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD 690
                                   + H   D  V  + S +L K L    
Sbjct: 312 -----------------------WVFHAEDDPVVPVENSRVLVKKLAEIG 338

>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A Length = 380

 Score = 44.7 bits (105), Expect = 8e-05
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHF 777
           +KV+RI+D    + H   D  V  + S +L K L       +   Y        G  PH 
Sbjct: 301 SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHG 360

>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346

 Score = 78.0 bits (192), Expect = 1e-15
 Identities = 38/230 (16%), Positives = 67/230 (29%), Gaps = 43/230 (18%)

Query: 487 LFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL 546
              P         K+P LI  +G  S+         +  L         V  +D R    
Sbjct: 99  YIKPKT-----EGKHPALIRFHGYSSN-----SGDWNDKLNYV-AAGFTVVAMDVRGQGG 147

Query: 547 KGNTLK------YAGYRRLGTVEIYDQ----------INVTRYLQENLPYIDKTRTAIWG 590
           +   +         G+   G  +  D             +   +   +P +D+ R  + G
Sbjct: 148 QSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMN-MPEVDEDRVGVMG 206

Query: 591 WSYGGYATGLALALDPSNVFKCGISVAPVTDW--IYYDTIYSERYMGLPTF------EDN 642
            S GG  +    AL+P  V K       ++D+  ++   +    Y  +  +         
Sbjct: 207 PSQGGGLSLACAALEP-RVRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHE 265

Query: 643 LEGYKIAALN-----NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQ 687
            E      L      N   RI+    L+  G MD             ++Q
Sbjct: 266 RENEVFTKLGYIDVKNLAKRIK-GDVLMCVGLMDQVCPPSTVFAAYNNIQ 314

>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386

 Score = 78.5 bits (193), Expect = 1e-15
 Identities = 38/214 (17%), Positives = 67/214 (31%), Gaps = 28/214 (13%)

Query: 487 LFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL 546
           + +P G        +P +I + GG  S +  E F       + D   +  A  DG     
Sbjct: 143 VRIPEG-----PGPHPAVIML-GGLESTK-EESF--QMENLVLDR-GMATATFDGPGQGE 192

Query: 547 KGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP 606
                + AG     T  + D +         L  I      + G S GG     + A +P
Sbjct: 193 MFEYKRIAGDYEKYTSAVVDLL-------TKLEAIRNDAIGVLGRSLGGNYALKSAACEP 245

Query: 607 SNVFKCGISVAPVTDWIYYDTIYS------ERYMGLPTFED-NLEGYKIAALNNKVDRIR 659
                  IS    +D  Y+D          +    + T E+  L  +      + + +I 
Sbjct: 246 R--LAACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIA 303

Query: 660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF 693
                ++HG   D V       + + +    +  
Sbjct: 304 -CPTYILHGV-HDEVPLSFVDTVLELVPAEHLNL 335

>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318

 Score = 75.6 bits (186), Expect = 7e-15
 Identities = 37/271 (13%), Positives = 73/271 (26%), Gaps = 40/271 (14%)

Query: 443 DKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYP 502
             + + L       DL+          V  ++     N        +P          +P
Sbjct: 29  KLSLEELAKVQAEPDLQPVDYPADGVKVYRLTYKSFGNARITGWYAVPDK-----EGPHP 83

Query: 503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA-----GYR 557
            ++  +G       +    +   +  A         +  R      +T         G+ 
Sbjct: 84  AIVKYHGYN----ASYDGEIHEMVNWA-LHGYATFGMLVRGQQRSEDTSISPHGHALGWM 138

Query: 558 RLGTVE---------IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN 608
             G ++           D +     +      +D+TR  + G S GG  T  A AL    
Sbjct: 139 TKGILDKDTYYYRGVYLDAVRALEVISS-FDEVDETRIGVTGGSQGGGLTIAAAALSD-I 196

Query: 609 VFKCGISVAPVTDWI----------YYDTIYSERYMGLP-TFEDNLEGY-KIAALNNKVD 656
                     ++++           Y +     R  G P T    ++       +N   D
Sbjct: 197 PKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNL-AD 255

Query: 657 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQ 687
           R++    L+  G +D              L+
Sbjct: 256 RVK-VPVLMSIGLIDKVTPPSTVFAAYNHLE 285

>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} Length = 391

 Score = 69.2 bits (168), Expect = 2e-12
 Identities = 33/245 (13%), Positives = 58/245 (23%), Gaps = 42/245 (17%)

Query: 470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYP--LLIHVYGG------------PSSFQ 515
           +E       P   +   +  P  +        P  L I   G                 +
Sbjct: 87  LEKWEFYPFPKSVSTFLVLKPEHLK----GAVPGVLCIPGSGRTKEGLVGEPGICDKLTE 142

Query: 516 VTERFSVDWNLYLADNKDIVVAY-------IDGRNSALKGNTLKYAGYRR--------LG 560
                 V   L +     + VA                KG    Y    R          
Sbjct: 143 DYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWL 202

Query: 561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT 620
               Y  + V  ++ +   YI K R  I G+S G     +   LD        +    + 
Sbjct: 203 GYTSYLDMQVLNWM-KAQSYIRKDRIVISGFSLGTEPMMVLGVLDKD--IYAFVYNDFLC 259

Query: 621 DWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVD------RIRDKQYLLVHGTMDDNV 674
                  + ++          N   + I       +       +  +  +   G +D + 
Sbjct: 260 QTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDVVASLAPRPIIFTEGGLDRDF 319

Query: 675 HFQQS 679
              QS
Sbjct: 320 RLVQS 324

>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415

 Score = 68.5 bits (167), Expect = 3e-12
 Identities = 35/209 (16%), Positives = 66/209 (31%), Gaps = 29/209 (13%)

Query: 497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGY 556
             K +P++I    G  S Q T+ +            DI +  +D  +            Y
Sbjct: 189 TDKPHPVVIVS-AGLDSLQ-TDMWR--LFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDY 244

Query: 557 RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISV 616
            RL          V   L   +PY+D  R  + G+ +GG A      L+   + K  + +
Sbjct: 245 SRLHQ-------AVLNELFS-IPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKI-KACVIL 295

Query: 617 APVTDWIYYDTIYSERY-----------MGLPTFEDNLEGYKIAALNNKVDRIRDKQ--- 662
                 I+      ++            +G    +      ++AA + KV      +   
Sbjct: 296 GAPIHDIFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTK 355

Query: 663 --YLLVHGTMDDNVHFQQSMMLAKSLQHA 689
              L +    D    +  + M+A    + 
Sbjct: 356 VPILAMSLEGDPVSPYSDNQMVAFFSTYG 384

>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337

 Score = 67.3 bits (164), Expect = 4e-12
 Identities = 32/231 (13%), Positives = 51/231 (22%), Gaps = 43/231 (18%)

Query: 487 LFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL 546
           L +P   +    +K P ++   G         R      L+   +   +   +D R    
Sbjct: 85  LLVPKLEE----EKLPCVVQYIGYNGG-----RGFPHDWLFWP-SMGYICFVMDTRGQGS 134

Query: 547 KGNTLKYAGYRRLGTVEIY---------------------DQINVTRYLQENLPYIDKTR 585
                    Y        Y                     D +          P +D+ R
Sbjct: 135 GWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAAS-FPQVDQER 193

Query: 586 TAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI-YYDTIYSERYMGLPTF----- 639
             I G S GG       AL           V  +  +      + +  Y  +  F     
Sbjct: 194 IVIAGGSQGGGIALAVSALSKK-AKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHR 252

Query: 640 ---EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQ 687
              E            N   R +    L   G MD+               
Sbjct: 253 DKEEIVFRTLSYFDGVNFAARAK-IPALFSVGLMDNICPPSTVFAAYNYYA 302

>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251

 Score = 65.8 bits (161), Expect = 5e-12
 Identities = 28/144 (19%), Positives = 60/144 (41%), Gaps = 20/144 (13%)

Query: 563 EIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD- 621
            + + + V  Y ++ L ++      + G S GG +  LA A++   + K  I ++P    
Sbjct: 82  WLTNILAVVDYAKK-LDFVT--DIYMAGHSQGGLSVMLAAAMERDII-KALIPLSPAAMI 137

Query: 622 --WIYYDTIYSERYM--GLPTFEDNLEGYKIAA----------LNNKVDRIRDKQYLLVH 667
                   +   ++    +P   D  +G K+            + + VD+   K  L+VH
Sbjct: 138 PEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYT-KPVLIVH 196

Query: 668 GTMDDNVHFQQSMMLAKSLQHADI 691
           G  D+ V ++ S+  +K  ++  +
Sbjct: 197 GDQDEAVPYEASVAFSKQYKNCKL 220

>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405

 Score = 67.4 bits (164), Expect = 5e-12
 Identities = 49/326 (15%), Positives = 90/326 (27%), Gaps = 54/326 (16%)

Query: 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYL 528
           +V+   +P++          LP     S  K    LI V GG +S             Y 
Sbjct: 127 AVDNSKIPLKSIEVPFEGELLPGYAIISEDKAQDTLIVVGGGDTSR----EDLFYMLGYS 182

Query: 529 ADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAI 588
               D  V  +D       G       +  +        I        +       + AI
Sbjct: 183 GWEHDYNVLMVDLPGQ---GKNPNQGLHFEVDARAAISAI-------LDWYQAPTEKIAI 232

Query: 589 WGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKI 648
            G+S GGY T  A+  D     K  I+  P+ D      I     +  P          +
Sbjct: 233 AGFSGGGYFTAQAVEKDKR--IKAWIASTPIYDVAEVFRISFSTALKAPKTILKWGSKLV 290

Query: 649 AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL 708
            ++N   +                                   + +     G   F  ++
Sbjct: 291 TSVNKVAEV---------------------------------NLNKYAWQFGQVDFITSV 317

Query: 709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEH 768
                 A     ++I     L + G  +D+   +QS +L  + +   I    + +  E  
Sbjct: 318 NEVLEQAQIVDYNKID-VPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESG 376

Query: 769 GL----IGVRPHFYHTLERFLDSCFA 790
                 +      ++ +  +L+  F 
Sbjct: 377 ADAHCQVNNFRLMHYQVFEWLNHIFK 402

>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238

 Score = 64.4 bits (156), Expect = 1e-11
 Identities = 24/194 (12%), Positives = 49/194 (25%), Gaps = 17/194 (8%)

Query: 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR 558
               LL+ ++G   S    E          A+ +  ++   D      +      +   R
Sbjct: 22  APKALLLALHGLQGS---KEHIL-ALLPGYAE-RGFLLLAFDAPRHGEREGPPPSSKSPR 76

Query: 559 LGTV---EIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGIS 615
                           R + E           + G S G +   L LA       +  ++
Sbjct: 77  YVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR--PRGVLA 134

Query: 616 VAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH 675
                  +            +      L  Y+        +       L +HG+ D  V 
Sbjct: 135 FIGSGFPMKLP------QGQVVEDPGVLALYQAPPATR-GEAYGGVPLLHLHGSRDHIVP 187

Query: 676 FQQSMMLAKSLQHA 689
             +     ++L+  
Sbjct: 188 LARMEKTLEALRPH 201

>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422

 Score = 65.6 bits (159), Expect = 2e-11
 Identities = 39/277 (14%), Positives = 74/277 (26%), Gaps = 55/277 (19%)

Query: 440 MLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTS--- 496
           +  +K   R L  D        L  +     E   +  Q   E   + FLPPG+      
Sbjct: 85  LEPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLLCQAQHE---RHFLPPGVWRQSVR 141

Query: 497 ------------GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS 544
                       G   +P +I ++G                  LA         +   N 
Sbjct: 142 AGRVRATLFLPPGPGPFPGIIDIFGIGG------GLLEYRASLLA-GHGFATLALAYYN- 193

Query: 545 ALKGNTLKYAGY-RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603
                   +      +  + +        Y+ ++ P +      + G S G        +
Sbjct: 194 --------FEDLPNNMDNISLEYFEEAVCYMLQH-PQVKGPGIGLLGISLGADICLSMAS 244

Query: 604 LDP---SNVFKCGISVAPVTDWIYYDTI----------YSERYMGL----PTFEDNLEGY 646
                 + V   G  ++  T   Y  +               + GL          + GY
Sbjct: 245 FLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGGY 304

Query: 647 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLA 683
           K  ++   +++ +    LL+ G  D N   +      
Sbjct: 305 KNPSM-IPIEKAQGP-ILLIVGQDDHNWRSELYAQTV 339

>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} Length = 398

 Score = 62.9 bits (152), Expect = 2e-10
 Identities = 32/241 (13%), Positives = 63/241 (26%), Gaps = 44/241 (18%)

Query: 470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYP--LLIHVYGG------------PSSFQ 515
           +E       P   +   + +P  I+    K  P  L I   GG            P    
Sbjct: 92  LEKWEFYPLPKCVSTFLVLIPDNIN----KPVPAILCIPGSGGNKEGLAGEPGIAPKLND 147

Query: 516 VTERFSVDWNLYLADNKDIVVAYIDGRN--------SALKGNTLKYAGYRR--------L 559
             +   +   L     +  +   +D               G+   Y    R         
Sbjct: 148 RYKDPKLTQALNFV-KEGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSY 206

Query: 560 GTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV 619
                Y  + V  +++    +I K R  + G+S G     +   LD S      +    +
Sbjct: 207 LGYASYLDMQVLNWMK-TQKHIRKDRIVVSGFSLGTEPMMVLGTLDTS--IYAFVYNDFL 263

Query: 620 TDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVD------RIRDKQYLLVHGTMDDN 673
                   + +           N   + I       +       +  +  +L  G +D +
Sbjct: 264 CQTQERAEVMTMPDKNGRRPFPNSIRHLIPDFWKNFNFPDIVAALAPRPIILTEGGLDRD 323

Query: 674 V 674
           +
Sbjct: 324 L 324

>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446

 Score = 62.5 bits (151), Expect = 2e-10
 Identities = 40/278 (14%), Positives = 71/278 (25%), Gaps = 57/278 (20%)

Query: 440 MLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTS--- 496
           +  +K   RL+  D    L   L  +     +   +  Q   E   + FLPPG+      
Sbjct: 101 LEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLLCQTRHE---RYFLPPGVRREPVR 157

Query: 497 ------------GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS 544
                           +P ++ ++G                  LA  K   V  +   N 
Sbjct: 158 VGRVRGTLFLPPEPGPFPGIVDMFGTGG------GLLEYRASLLA-GKGFAVMALAYYNY 210

Query: 545 ALKGNTLKYAGY-RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603
                        + + T+ +        YL  + P +      + G S GG       +
Sbjct: 211 E---------DLPKTMETLHLEYFEEAMNYLLSH-PEVKGPGVGLLGISKGGELCLSMAS 260

Query: 604 LDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP------------------TFEDNLEG 645
                +    +    V +         E    +                        LEG
Sbjct: 261 FLK-GITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEG 319

Query: 646 YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLA 683
               +    V+R     +L + G  D N   +     A
Sbjct: 320 PDQKSF-IPVERAEST-FLFLVGQDDHNWKSEFYANEA 355

>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} Length = 276

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 33/227 (14%), Positives = 61/227 (26%), Gaps = 38/227 (16%)

Query: 477 IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQ-VTERFSVDWNLYLADNKDIV 535
              N  A V  +       + +  +P +I   GG   +Q +++R S    L     +   
Sbjct: 19  FSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGG--GYQHISQRESDPLALAFLA-QGYQ 75

Query: 536 VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVT---------RYLQENLP--YIDKT 584
           V              L Y     +                       + +N     I+  
Sbjct: 76  VL------------LLNY----TVMNKGTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPE 119

Query: 585 RTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLE 644
           +  + G S GG+        +  +  K  I   PVT + +        +          E
Sbjct: 120 QVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSDLSHFNFEI------E 173

Query: 645 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI 691
                 ++ KV         + H   D+ V    S+     L    +
Sbjct: 174 NISEYNISEKVTS-STPPTFIWHTADDEGVPIYNSLKYCDRLSKHQV 219

>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A Length = 303

 Score = 52.6 bits (126), Expect = 2e-07
 Identities = 29/219 (13%), Positives = 59/219 (26%), Gaps = 41/219 (18%)

Query: 487 LFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD---NKDIVVAYIDGRN 543
           +F           + PL + V+GG   +Q      +  +  +      +   VA +D   
Sbjct: 72  VFYSEK----TTNQAPLFVFVHGG--YWQ---EMDMSMSCSIVGPLVRRGYRVAVMD--- 119

Query: 544 SALKGNTLKYAGYRRLGTV---EIYDQINV-TRYLQENLPYIDKTRTAIWGWSYGGYATG 599
                       Y     V   ++  Q      ++ +       +     G   G +   
Sbjct: 120 ------------YNLCPQVTLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLA 167

Query: 600 LALA------LDPSNVFKCGISVAPVTDW---IYYDTIYSERYMGLPTFEDNLEGYKIAA 650
             L          S +    I +  V D       +++  +  +GL    +      +  
Sbjct: 168 QILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLESVNPKNILGL-NERNIESVSPMLW 226

Query: 651 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 689
               V      +  +V    D     +QS   A  L+  
Sbjct: 227 EYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKK 265

>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} Length = 283

 Score = 51.8 bits (124), Expect = 3e-07
 Identities = 35/246 (14%), Positives = 69/246 (28%), Gaps = 41/246 (16%)

Query: 464 NITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQ-VTERFSV 522
           N+    ++ +   +     AQ+  +L      +     P +I V GG  S+  +    + 
Sbjct: 14  NLYFQGMQVIKQKLTAT-CAQLTGYLHQPDTNAHQTNLPAIIIVPGG--SYTHIPVAQAE 70

Query: 523 DWNLYLADNKDIVVAYIDGRNSALKGNTLKY---AGYRRLGTVEIYDQINVTRYLQENLP 579
              +  A                     L+Y      + LG   + D       L+++  
Sbjct: 71  SLAMAFAG-HGYQAF------------YLEYTLLTDQQPLGLAPVLDLGRAVNLLRQHAA 117

Query: 580 --YIDKTRTAIWGWSYGGYATGLALALDPSNVF------------KCGISVAPVTDWIYY 625
             +ID  +    G+S GG+   L      + V                +   PV   +  
Sbjct: 118 EWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLG 177

Query: 626 DTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKS 685
                                   A +  V+   ++   +     D  V    ++  A +
Sbjct: 178 FPKDDATLATWT------PTPNELAADQHVNS-DNQPTFIWTTADDPIVPATNTLAYATA 230

Query: 686 LQHADI 691
           L  A I
Sbjct: 231 LATAKI 236

>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* Length = 462

 Score = 51.1 bits (121), Expect = 1e-06
 Identities = 44/333 (13%), Positives = 88/333 (26%), Gaps = 26/333 (7%)

Query: 445 TGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLL 504
              +L Y  TN          T+       +P +P    ++        D +     P  
Sbjct: 74  ASFQLQYRTTNTQNEAVADVATV------WIPAKPASPPKI-FSYQVYEDATALDCAPSY 126

Query: 505 IHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEI 564
            ++ G     +VT        +  A  +   V   D       G    +      G    
Sbjct: 127 SYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHE-----GFKAAFIAGYEEG---- 177

Query: 565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY 624
              ++  R L+        ++ A+ G+S G +AT  A +L  S   +  I V        
Sbjct: 178 MAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNI-VGASHGGTP 236

Query: 625 YDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD--KQYLLVHG-----TMDDNVHFQ 677
                +  ++             ++ L+     +    +  L   G      +       
Sbjct: 237 VSAKDTFTFLN-GGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCL 295

Query: 678 QSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKV-DRIRDKQYLLVHGTMD 736
             ++L     +   +      +        L+   +          +      + H   D
Sbjct: 296 PQVVLTYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPD 355

Query: 737 DNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHG 769
           + V +Q +    K             YP  EH 
Sbjct: 356 EIVPYQPAATYVKEQCAKGANINFSPYPIAEHL 388

>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A Length = 397

 Score = 49.9 bits (118), Expect = 2e-06
 Identities = 45/310 (14%), Positives = 81/310 (26%), Gaps = 34/310 (10%)

Query: 487 LFLPPGIDTSGHKKYPLL--------IHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAY 538
           L +P G   SG   YPLL        +         +  +          +  +  VV  
Sbjct: 67  LLIPGGERCSG--PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLAS--QGYVVVG 122

Query: 539 IDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI---DKTRTAIWGWSYGG 595
            D     L  +   Y  Y      E    I+  R  +  L ++      +  + G+S GG
Sbjct: 123 SDYLG--LGKSNYAYHPYL-HSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGG 179

Query: 596 YATG-----LALALDPSNVFKCGISVAPVTDWIYY--DTIYSERYMGLPTFEDNLEGYKI 648
           +        +   L           ++          D+      +G  TF   L  Y I
Sbjct: 180 HTAMATQREIEAHLSKEFHLVASAPISGPYALEQTFLDSWSGSNAVGENTFGILLGSYAI 239

Query: 649 AALNNKVDRIRDKQYLLVHGTMDDNVH--FQQSMMLAKSLQHADIM-FQSQRYMGLPTFE 705
            A+ +    I  +   +        V   F     L     +  +      +    P F 
Sbjct: 240 VAMQHTYKNIYLEPGQVFQDPWAAKVEPLFPGKQSLTDMFLNDTLPSIDKVKSYFQPGFY 299

Query: 706 DNLEGYKIAALNNKVDRIRDKQY------LLVHGTMDDNVHFQQSMMLAKSLQHADIMFQ 759
            +            + R    ++      LL   + D  V  + +     S Q       
Sbjct: 300 SDFPSNPANPFRQDLARNNLLEWAPQTPTLLCGSSNDATVPLKNAQTAIASFQQRGSNQV 359

Query: 760 SQTYPDEEHG 769
           +       + 
Sbjct: 360 ALVDTGTGNA 369

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 3e-06
 Identities = 88/569 (15%), Positives = 165/569 (28%), Gaps = 173/569 (30%)

Query: 1   MFTEEVLSSSSALWF---------SPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYT 51
            F EEVL  +   +           PS     Y    D          Y N     ++Y 
Sbjct: 81  KFVEEVLRINYK-FLMSPIKTEQRQPSMMTRMYIEQRD--------RLY-NDNQVFAKYN 130

Query: 52  QAINLREPVLSRVNWANE-----------------SVVAA-----------------WVN 77
             ++  +P L       E                 + VA                  W+N
Sbjct: 131 --VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188

Query: 78  RVQNRARITRCSINEGTCDVV--FSRDLDRGWFEPFDH-----------------LRFSS 118
                  +  C+  E   +++      +D  W    DH                 L  S 
Sbjct: 189 -------LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241

Query: 119 DGKKMLLILSHNQESDGSTPVDSWDH-----LT--FIDLDDQAGIKDKVPVPLTRGRFTV 171
             +  LL+L + Q +      ++++      LT  F  + D         + L     T+
Sbjct: 242 PYENCLLVLLNVQNAK---AWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 172 TE-----ILA-W------DERE----NNPLLI-LSHNQESDGSTPVDSWDHLTFIDLDD- 213
           T      +L  +      D        NP  + +      DG    D+W H+    L   
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358

Query: 214 -QAGIKDKVPVPLTRGRFTVTEILAWDEKENNV-EPVLSRVNWAN--ESVVAAWVNRVQN 269
            ++ +    P    R  F    +        ++   +LS + W +  +S V   VN++  
Sbjct: 359 IESSLNVLEP-AEYRKMFDRLSVF---PPSAHIPTILLSLI-WFDVIKSDVMVVVNKLHK 413

Query: 270 RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKML--LILSHNQ-----ESD 322
            + + +    E T   + S  L+         L+   + +  L   I+ H       +SD
Sbjct: 414 YSLVEK-QPKESTI-SIPSIYLE---------LKVKLENEYALHRSIVDHYNIPKTFDSD 462

Query: 323 GSTPVDSWD---------HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI----LAWDEKE 369
              P    D         HL  I+  ++  +   V +     RF   +I     AW+   
Sbjct: 463 DLIP-PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF---RFLEQKIRHDSTAWNASG 518

Query: 370 NNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVL 429
           + +  L           Y+  I D     E +   +L             F   +   ++
Sbjct: 519 SILNTLQQ------LKFYKPYICDNDPKYERLVNAIL------------DFLPKIEENLI 560

Query: 430 SCIGPGIPEIMLFDKTGQRLLYWDTNEDL 458
                 +  I L  +     ++ + ++ +
Sbjct: 561 CSKYTDLLRIALMAEDEA--IFEEAHKQV 587

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 5e-04
 Identities = 39/287 (13%), Positives = 90/287 (31%), Gaps = 87/287 (30%)

Query: 494 DTSGHK-KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK 552
           +T  H+ +Y  ++ V+         + F  ++     D KD+     D   S L    + 
Sbjct: 10  ETGEHQYQYKDILSVF--------EDAFVDNF-----DCKDV----QDMPKSILSKEEID 52

Query: 553 Y---------AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603
           +            R   T+    +  V ++++E L   +      + +      T     
Sbjct: 53  HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI-N------YKFLMSPIKT---EQ 102

Query: 604 LDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQY 663
             PS + +  I           D +Y++  +        L+      L   +  +R  + 
Sbjct: 103 RQPSMMTRMYIE--------QRDRLYNDNQVFAKYNVSRLQ--PYLKLRQALLELRPAKN 152

Query: 664 LLVHG---------------------TMDDNVHFQQSMMLAKSLQHADIMFQSQR----- 697
           +L+ G                      MD  + +   + L        ++   Q+     
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW---LNLKNCNSPETVLEMLQKLLYQI 209

Query: 698 ---YMGLPTFEDNLEGYKIAALNNKVDR-IRDKQY---LLVHGTMDD 737
              +        N++  +I ++  ++ R ++ K Y   LLV   + +
Sbjct: 210 DPNWTSRSDHSSNIK-LRIHSIQAELRRLLKSKPYENCLLV---LLN 252

>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 23/142 (16%), Positives = 44/142 (30%), Gaps = 17/142 (11%)

Query: 563 EIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD- 621
           EI D   +  Y++ +          + G + GG    +   L P  + K  + +AP    
Sbjct: 101 EIEDANAILNYVKTDPHV---RNIYLVGHAQGGVVASMLAGLYPDLI-KKVVLLAPAATL 156

Query: 622 ----------WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQY--LLVHGT 669
                      + Y+  +    +            +IA      +          L+HGT
Sbjct: 157 KGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGT 216

Query: 670 MDDNVHFQQSMMLAKSLQHADI 691
            D  V    S    +  Q++ +
Sbjct: 217 DDTVVSPNASKKYDQIYQNSTL 238

>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367

 Score = 45.5 bits (107), Expect = 4e-05
 Identities = 38/264 (14%), Positives = 80/264 (30%), Gaps = 31/264 (11%)

Query: 487 LFLPPGIDTSGHKKYPLLI--HVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS 544
           L+LP         + P ++    +G      V E+ S  +   +A+   + +A+ D   +
Sbjct: 85  LYLPKNRGG---DRLPAIVIGGPFGA-----VKEQSSGLYAQTMAERGFVTLAF-DPSYT 135

Query: 545 ALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL 604
              G   +         +   D      ++   LP +++ R  + G    G     A+A+
Sbjct: 136 GESGGQPRNVAS---PDINTEDFSAAVDFIS-LLPEVNRERIGVIGICGWGGMALNAVAV 191

Query: 605 DPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDK--- 661
           D     K  ++            + S+ Y    T E      +         R +D    
Sbjct: 192 DKR--VKAVVTSTMYDM----TRVMSKGYNDSVTLEQRTRTLEQLG----QQRWKDAESG 241

Query: 662 QYLLVHGTMDDNVHFQQSMMLAKS--LQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNK 719
                    +      Q ++      +       ++       T    L    +  L   
Sbjct: 242 TPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTY- 300

Query: 720 VDRIRDKQYLLVHGTMDDNVHFQQ 743
           +  I  +  LL+HG    + +F +
Sbjct: 301 IKEISPRPILLIHGERAHSRYFSE 324

>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* Length = 277

 Score = 45.2 bits (107), Expect = 4e-05
 Identities = 30/233 (12%), Positives = 59/233 (25%), Gaps = 42/233 (18%)

Query: 479 PNMEAQVKLFLPPGI-DTSGHKKYPLLIHVYGGPSSFQ-VTERFSVDWNLYLADNKDIVV 536
                Q+  +    I D      YP++I   GG   F   + R        +     +  
Sbjct: 12  AAHPFQITAYWLDQISDFETAVDYPIMIICPGG--GFTYHSGREEAPIATRMMA-AGMHT 68

Query: 537 AYIDGRNSALKGNTLKY---AGYRRLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGW 591
                         L Y    G + +    +        ++       ++D  R  + G+
Sbjct: 69  V------------VLNYQLIVGDQSVYPWALQQLGATIDWITTQASAHHVDCQRIILAGF 116

Query: 592 SYGGYATGLALAL-------------DPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT 638
           S GG+       +                      I   PV D        S     +  
Sbjct: 117 SAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGFPTTSAARNQIT- 175

Query: 639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI 691
                   ++ A    V     K   +     D++V    S+   +++    +
Sbjct: 176 -----TDARLWAAQRLVTP-ASKPAFVWQTATDESVPPINSLKYVQAMLQHQV 222

>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} Length = 275

 Score = 44.1 bits (104), Expect = 9e-05
 Identities = 35/331 (10%), Positives = 78/331 (23%), Gaps = 74/331 (22%)

Query: 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-WNLY 527
            ++Y  +  +        +               ++++++GG       +   +    + 
Sbjct: 3   EIKYKVIT-KDAFALPYTIIKA-----KNQPTKGVIVYIHGG--GLMFGKANDLSPQYID 54

Query: 528 LADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV----EIYDQINVTRYLQENLPYIDK 583
           +      ++                   YR L  V     I D       +Q        
Sbjct: 55  ILTEHYDLIQ----------------LSYRLLPEVSLDCIIEDVYASFDAIQSQY---SN 95

Query: 584 TRTAIWGWSYGGY-ATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDN 642
                +G S G Y +  +A   D   V          T+       Y  +          
Sbjct: 96  CPIFTFGRSSGAYLSLLIARDRDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSINETMI 155

Query: 643 LEGYKIAALNNKVDRIRDKQYLLVHGTMD--DNVHFQQSMMLAKSLQHADIMFQSQRYMG 700
            +      +       R   Y+   GT    + ++         ++   +          
Sbjct: 156 AQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDE-------LKT 208

Query: 701 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQS 760
           LP                           + H   D +V  ++S  +   + H+      
Sbjct: 209 LPPV------------------------FIAHCNGDYDVPVEESEHIMNHVPHSTF---- 240

Query: 761 QTYPDEEHGLIGVRP----HFYHTLERFLDS 787
           +     EH             Y  +  FL++
Sbjct: 241 ERVNKNEHDFDRRPNDEAITIYRKVVDFLNA 271

>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* Length = 268

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 19/173 (10%)

Query: 466 TLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLI--H-VYGGPSSFQ---VTER 519
            + ++ Y S        A+V  +LPPG      KKY +L   H + G  + +        
Sbjct: 31  QVVNISYFSTATNSTRPARV--YLPPGYSKD--KKYSVLYLLHGIGGSENDWFEGGGRAN 86

Query: 520 FSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP 579
              D  +     K +++   +   +   G    Y  + +     +        Y++ N  
Sbjct: 87  VIADNLIAEGKIKPLIIVTPNTNAAG-PGIADGYENFTKDLLNSLIP------YIESNYS 139

Query: 580 YI-DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSE 631
              D+   AI G S GG  +   + L   + F     ++   +    + ++ +
Sbjct: 140 VYTDREHRAIAGLSMGGGQS-FNIGLTNLDKFAYIGPISAAPNTYPNERLFPD 191

>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} Length = 377

 Score = 43.7 bits (102), Expect = 2e-04
 Identities = 50/365 (13%), Positives = 99/365 (27%), Gaps = 40/365 (10%)

Query: 418 ATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPI 477
             FS   +   L  + P     + +D    ++ Y   + D           +   +++PI
Sbjct: 15  GEFSRETAEIALKKMPPLDTLTVHYDLQLYKINYKTQSPD------GNLTIASGLVAMPI 68

Query: 478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVA 537
            P  +  +  +      T   +             S    + +        +     +  
Sbjct: 69  HPVGQVGIISYQHG---TRFERNDV---------PSRNNEKNYIYLAAYGNS--AGYMTV 114

Query: 538 YIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYA 597
             D         TL              D +   + L   L Y    +  + G+S GG++
Sbjct: 115 MPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFS 174

Query: 598 TGLALALDPSN----VFKCGISVAPVTDWIYY-DTIYSERYMGLPTFEDNLEGYKIAALN 652
           T +   +                +    W      +  E       +      Y   +L 
Sbjct: 175 TIVMFEMLAKEYPDLPVSAVAPGSAPYGWEETMHFVMLEPGPRATAY----LAYFFYSLQ 230

Query: 653 ------NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFED 706
                 +  D I    Y  +   + D  H     +L    Q   ++FQ +   G+ +  D
Sbjct: 231 TYKSYWSGFDEIFAPPYNTLIPELMDGYHA-VDEILQALPQDPLLIFQPKFSNGIISKTD 289

Query: 707 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQ--HADIMFQSQTYP 764
                 +    N  D       LLV    D +V +  + M   S +     +  +S    
Sbjct: 290 R-NTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSDFVWIKS-VSD 347

Query: 765 DEEHG 769
             +H 
Sbjct: 348 ALDHV 352

>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} Length = 331

 Score = 42.3 bits (99), Expect = 4e-04
 Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 34/184 (18%)

Query: 461 ALTNITLPSVEYMSVPIQP-NMEAQVKLFLPPGIDTSGHKKYPLLI--HVYGGPSSFQVT 517
             T+IT    +   +  +      +  + LP G   S  + YP++       G   F   
Sbjct: 3   TSTSITAVEYQSKRLESRLLKETREYVIALPEGYAQS-LEAYPVVYLLD---GEDQFDHM 58

Query: 518 ERFSVDWNLYLADNKDIVVAYIDG-------------RNSALKGNTLKYAGYRRLGTVEI 564
               + + L       I    I G                 L         Y+  G    
Sbjct: 59  ASL-LQF-LSQGTMPQIPKVIIVGIHNTNRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGR 116

Query: 565 YDQINVTRYLQENL-PYIDKT-----RTAIWGWSYGGYATGLALALDPSNVFKCGISVAP 618
           +       ++++ L P I+          + G S+GG     AL  D   +F   +++  
Sbjct: 117 F-----LDFIEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDR-PLFSAYLALDT 170

Query: 619 VTDW 622
              +
Sbjct: 171 SLWF 174

>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 Length = 262

 Score = 41.4 bits (97), Expect = 5e-04
 Identities = 36/253 (14%), Positives = 74/253 (29%), Gaps = 51/253 (20%)

Query: 456 EDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQ 515
           ED R +L +    ++ Y           +  LFLP G          L + V+GG   + 
Sbjct: 29  EDFRNSLQDRARLNLSYGEGDRH-----KFDLFLPEG------TPVGLFVFVHGG--YWM 75

Query: 516 VTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINV-TRYL 574
             ++ S       A +K   VA                     +   EI  QI+      
Sbjct: 76  AFDKSSWSHLAVGALSKGWAVAMPSYEL------------CPEVRISEITQQISQAVTAA 123

Query: 575 QENLPYIDKTRTAIWGWSYGGYATGLALA-----LDPSNVFKCGISVAPVTDWIYYDTIY 629
            + +         + G S GG+     L             +  + ++P++D        
Sbjct: 124 AKEID----GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTS 179

Query: 630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQ-- 687
                 +     + +     +     +R  D +  +  G  +      Q++ L ++    
Sbjct: 180 MNEKFKM-----DADAAIAESPVEMQNR-YDAKVTVWVGGAERPAFLDQAIWLVEAWDAD 233

Query: 688 --------HADIM 692
                   H +++
Sbjct: 234 HVIAFEKHHFNVI 246

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	790
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	100.0
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	100.0
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	100.0
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	100.0
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	100.0
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	100.0
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	100.0
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	100.0
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	100.0
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	100.0
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	100.0
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	100.0
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	100.0
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.89
4ao6_A	259	Esterase; hydrolase, thermo label; 1.60A {Unidenti	99.88
3hxk_A	276	Sugar hydrolase; alpha-beta protein., structural g	99.86
3doh_A	380	Esterase; alpha-beta hydrolase, beta sheet; 2.60A	99.86
2jbw_A	386	Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine	99.86
2wtm_A	251	EST1E; hydrolase; 1.60A {Clostridium proteoclastic	99.86
3f67_A	241	Putative dienelactone hydrolase; alpha-beta-alpha	99.86
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.86
2i3d_A	249	AGR_C_3351P, hypothetical protein ATU1826; structu	99.86
3k2i_A	422	Acyl-coenzyme A thioesterase 4; alpha/beta hydrola	99.85
3hlk_A	446	Acyl-coenzyme A thioesterase 2, mitochondrial; alp	99.85
4fbl_A	281	LIPS lipolytic enzyme; thermostable, structural ge	99.85
3fak_A	322	Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc	99.84
3ebl_A	365	Gibberellin receptor GID1; alpha/beta hydrolase, l	99.84
1vlq_A	337	Acetyl xylan esterase; TM0077, structural genomics	99.84
2o2g_A	223	Dienelactone hydrolase; YP_324580.1, structural ge	99.84
3ga7_A	326	Acetyl esterase; phosphoserine, IDP00896, hydrolas	99.84
3ksr_A	290	Putative serine hydrolase; catalytic triad, struct	99.84
4e15_A	303	Kynurenine formamidase; alpha/beta hydrolase fold,	99.83
3bjr_A	283	Putative carboxylesterase; structural genomics, jo	99.83
3bxp_A	277	Putative lipase/esterase; putative carboxylesteras	99.83
3trd_A	208	Alpha/beta hydrolase; cellular processes; 1.50A {C	99.83
1zi8_A	236	Carboxymethylenebutenolidase; alpha and beta prote	99.83
3qh4_A	317	Esterase LIPW; structural genomics, ssgcid, seattl	99.83
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.83
3pfb_A	270	Cinnamoyl esterase; alpha/beta hydrolase fold, hyd	99.82
3fcy_A	346	Xylan esterase 1; alpha/beta hydrolase, carbohydra	99.82
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.82
2b9v_A	652	Alpha-amino acid ester hydrolase; catalytic triad,	99.82
1lzl_A	323	Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod	99.82
1mpx_A	615	Alpha-amino acid ester hydrolase; alpha/beta hydro	99.82
1l7a_A	318	Cephalosporin C deacetylase; structural genomics,	99.82
2hm7_A	310	Carboxylesterase; alpha/beta hydrolase fold, hydro	99.82
3h04_A	275	Uncharacterized protein; protein with unknown func	99.81
3ain_A	323	303AA long hypothetical esterase; carboxylesterase	99.81
2fuk_A	220	XC6422 protein; A/B hydrolase, structural genomics	99.81
2c7b_A	311	Carboxylesterase, ESTE1; carboxyesterase, thermoph	99.81
3fcx_A	282	FGH, esterase D, S-formylglutathione hydrolase; re	99.81
3fnb_A	405	Acylaminoacyl peptidase SMU_737; alpha-beta-alpha	99.81
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.81
2zsh_A	351	Probable gibberellin receptor GID1L1; plant hormon	99.81
2o7r_A	338	CXE carboxylesterase; alpha/beta hydrolase; 1.40A	99.81
3e4d_A	278	Esterase D; S-formylglutathione hydrolase, hydrola	99.8
3i6y_A	280	Esterase APC40077; lipase, structural genomics, PS	99.8
2wir_A	313	Pesta, alpha/beta hydrolase fold-3 domain protein;	99.8
2hdw_A	367	Hypothetical protein PA2218; alpha/beta hydrolase	99.8
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.8
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.8
3llc_A	270	Putative hydrolase; structural genomics, joint cen	99.8
3ls2_A	280	S-formylglutathione hydrolase; psychrophilic organ	99.8
4h0c_A	210	Phospholipase/carboxylesterase; PSI-biology, midwe	99.79
3k6k_A	322	Esterase/lipase; alpha/beta hydrolase fold; 2.20A	99.79
3vis_A	306	Esterase; alpha/beta-hydrolase fold, polyethylene	99.79
2pbl_A	262	Putative esterase/lipase/thioesterase; alpha/beta-	99.79
1jkm_A	361	Brefeldin A esterase; serine hydrolase, degradatio	99.79
1jfr_A	262	Lipase; serine hydrolase; 1.90A {Streptomyces exfo	99.79
1jjf_A	268	Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x	99.78
3hju_A	342	Monoglyceride lipase; alpha/beta hydrolase, hydrol	99.77
4b6g_A	283	Putative esterase; hydrolase, formaldehyde detoxif	99.77
1lns_A	763	X-prolyl dipeptidyl aminopetidase; alpha beta hydr	99.77
1vkh_A	273	Putative serine hydrolase; structural genomics, jo	99.76
3pe6_A	303	Monoglyceride lipase; alpha-beta hydrolase fold, 2	99.76
2uz0_A	263	Esterase, tributyrin esterase; alpha/beta hydrolas	99.76
4f0j_A	315	Probable hydrolytic enzyme; alpha/beta hydrolase f	99.76
1tht_A	305	Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.	99.76
3d7r_A	326	Esterase; alpha/beta fold, hydrolase; 2.01A {Staph	99.75
3bdi_A	207	Uncharacterized protein TA0194; NP_393672.1, predi	99.75
1jji_A	311	Carboxylesterase; alpha-beta hydrolase fold, hydro	99.75
3mve_A	415	FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/	99.75
3ia2_A	271	Arylesterase; alpha-beta hydrolase fold, transitio	99.74
4ezi_A	377	Uncharacterized protein; alpha-beta hydrolases fol	99.74
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.74
3dkr_A	251	Esterase D; alpha beta hydrolase, mechanism, catal	99.74
1k8q_A	377	Triacylglycerol lipase, gastric; APHA beta hydrola	99.74
1fj2_A	232	Protein (acyl protein thioesterase 1); alpha/beta	99.74
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.74
4fhz_A	285	Phospholipase/carboxylesterase; alpha/beta hydrola	99.73
3om8_A	266	Probable hydrolase; structural genomics, PSI-2, pr	99.73
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.73
2qm0_A	275	BES; alpha-beta structure, structural genomics, PS	99.73
3fob_A	281	Bromoperoxidase; structural genomics, IDP00046, ba	99.73
3v48_A	268	Aminohydrolase, putative aminoacrylate hydrolase R	99.73
3d0k_A	304	Putative poly(3-hydroxybutyrate) depolymerase LPQ;	99.73
2pl5_A	366	Homoserine O-acetyltransferase; alpha/beta hydrola	99.72
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.72
2ocg_A	254	Valacyclovir hydrolase; alpha beta hydrolase fold;	99.72
1zoi_A	276	Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo	99.72
3rm3_A	270	MGLP, thermostable monoacylglycerol lipase; alpha/	99.72
1a88_A	275	Chloroperoxidase L; haloperoxidase, oxidoreductase	99.72
3og9_A	209	Protein YAHD A copper inducible hydrolase; alpha/b	99.72
3iii_A	560	COCE/NOND family hydrolase; structural genomics, c	99.72
1a8s_A	273	Chloroperoxidase F; haloperoxidase, oxidoreductase	99.72
1auo_A	218	Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl	99.71
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.71
1q0r_A	298	RDMC, aclacinomycin methylesterase; anthracycline,	99.71
2qjw_A	176	Uncharacterized protein XCC1541; putative hydrolas	99.71
2fx5_A	258	Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse	99.71
2yys_A	286	Proline iminopeptidase-related protein; TTHA1809,	99.71
3g8y_A	391	SUSD/RAGB-associated esterase-like protein; struct	99.71
1imj_A	210	CIB, CCG1-interacting factor B; alpha/beta hydrola	99.7
3cn9_A	226	Carboxylesterase; alpha/beta hydrolase fold super-	99.7
4fle_A	202	Esterase; structural genomics, PSI-biology, northe	99.7
3dqz_A	258	Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl	99.7
2y6u_A	398	Peroxisomal membrane protein LPX1; hydrolase, puta	99.7
3sty_A	267	Methylketone synthase 1; alpha/beta hydrolase, dec	99.7
3kxp_A	314	Alpha-(N-acetylaminomethylene)succinic acid hydrol	99.7
3e0x_A	245	Lipase-esterase related protein; APC60309, clostri	99.7
1sfr_A	304	Antigen 85-A; alpha/beta hydrolase, structural gen	99.7
1mtz_A	293	Proline iminopeptidase; alpha-beta hydrolase, CAP	99.7
3nwo_A	330	PIP, proline iminopeptidase; structural genomics,	99.69
1tqh_A	247	Carboxylesterase precursor; tetrahedral intermedia	99.69
2qs9_A	194	Retinoblastoma-binding protein 9; B5T overexpresse	99.69
1r88_A	280	MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP	99.69
1brt_A	277	Bromoperoxidase A2; haloperoxidase, oxidoreductase	99.69
1ufo_A	238	Hypothetical protein TT1662; alpha-beta fold, hydr	99.69
3i1i_A	377	Homoserine O-acetyltransferase; structural genomic	99.69
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.69
1qlw_A	328	Esterase; anisotropic refinement, atomic resolutio	99.69
2xua_A	266	PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate	99.69
1a8q_A	274	Bromoperoxidase A1; haloperoxidase, oxidoreductase	99.69
3nuz_A	398	Putative acetyl xylan esterase; structural genomic	99.69
4dnp_A	269	DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu	99.69
3r0v_A	262	Alpha/beta hydrolase fold protein; structural geno	99.69
2h1i_A	226	Carboxylesterase; structural genomics, PSI-2, prot	99.68
3oos_A	278	Alpha/beta hydrolase family protein; APC67239.0, p	99.68
3u0v_A	239	Lysophospholipase-like protein 1; alpha, beta hydr	99.68
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.68
2qru_A	274	Uncharacterized protein; alpha/beta-hydrolase, str	99.68
3vdx_A	456	Designed 16NM tetrahedral protein CAGE containing	99.68
3b5e_A	223	MLL8374 protein; NP_108484.1, carboxylesterase, st	99.68
3qit_A	286	CURM TE, polyketide synthase; thioesterase, alpha/	99.67
3qvm_A	282	OLEI00960; structural genomics, PSI-biology, midwe	99.67
2r8b_A	251	AGR_C_4453P, uncharacterized protein ATU2452; APC6	99.67
3hss_A	293	Putative bromoperoxidase; alpha beta hydrolase, ox	99.67
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	99.67
3i2k_A	587	Cocaine esterase; alpha/beta hydrolase, hydrolase;	99.67
4f21_A	246	Carboxylesterase/phospholipase family protein; str	99.67
4g9e_A	279	AHL-lactonase, alpha/beta hydrolase fold protein;	99.67
1gkl_A	297	Endo-1,4-beta-xylanase Y; hydrolase, esterase fami	99.66
1c4x_A	285	BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di	99.66
2b61_A	377	Homoserine O-acetyltransferase; acyl-enzyme, aspar	99.66
1iup_A	282	META-cleavage product hydrolase; aromatic compound	99.66
2wue_A	291	2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas	99.66
3u1t_A	309	DMMA haloalkane dehalogenase; alpha/beta-hydrolase	99.66
3bwx_A	285	Alpha/beta hydrolase; YP_496220.1, joint center fo	99.65
2r11_A	306	Carboxylesterase NP; 2632844, putative hydrolase,	99.65
3fsg_A	272	Alpha/beta superfamily hydrolase; PF00561, MCSG, P	99.65
1wom_A	271	RSBQ, sigma factor SIGB regulation protein RSBQ; a	99.65
1uxo_A	192	YDEN protein; hydrolase, A/B hydrolase, esterase,	99.65
3d59_A	383	Platelet-activating factor acetylhydrolase; secret	99.65
1b6g_A	310	Haloalkane dehalogenase; hydrolase, alpha/beta-hyd	99.65
2puj_A	286	2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola;	99.64
1j1i_A	296	META cleavage compound hydrolase; carbazole degrad	99.64
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.64
3g9x_A	299	Haloalkane dehalogenase; alpha/beta hydrolase, hel	99.64
1wm1_A	317	Proline iminopeptidase; complex with inhibitor, hy	99.63
3h2g_A	397	Esterase; xanthomonas oryzae PV. oryzae, cell WALL	99.63
2xt0_A	297	Haloalkane dehalogenase; hydrolase, alpha-beta hyd	99.63
1hkh_A	279	Gamma lactamase; hydrolase, alpha/beta hydrolase,	99.63
3p2m_A	330	Possible hydrolase; alpha/beta hydrolase superfami	99.63
3afi_E	316	Haloalkane dehalogenase; A/B-hydrolase, hydrolase;	99.63
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.63
3bf7_A	255	Esterase YBFF; thioesterase, helical CAP, hydrolas	99.62
1u2e_A	289	2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase	99.62
2wfl_A	264	Polyneuridine-aldehyde esterase; alkaloid metaboli	99.62
1azw_A	313	Proline iminopeptidase; aminopeptidase, serine pro	99.62
2vat_A	444	Acetyl-COA--deacetylcephalosporin C acetyltransfer	99.62
2xmz_A	269	Hydrolase, alpha/beta hydrolase fold family; menaq	99.61
1xkl_A	273	SABP2, salicylic acid-binding protein 2; alpha-bet	99.61
2qmq_A	286	Protein NDRG2, protein NDR2; alpha/beta-hydrolases	99.61
3c6x_A	257	Hydroxynitrilase; atomic resolution, hydroxynitril	99.61
2cjp_A	328	Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu	99.61
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.6
3r40_A	306	Fluoroacetate dehalogenase; FACD, defluorinase, al	99.6
1ehy_A	294	Protein (soluble epoxide hydrolase); alpha/beta hy	99.59
3kda_A	301	CFTR inhibitory factor (CIF); alpha/beta hydrolase	99.59
1dqz_A	280	85C, protein (antigen 85-C); fibronectin, structur	99.59
1m33_A	258	BIOH protein; alpha-betta-alpha sandwich, structur	99.58
2e3j_A	356	Epoxide hydrolase EPHB; epoxide hydrolase B, struc	99.58
3ibt_A	264	1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO,	99.58
2qvb_A	297	Haloalkane dehalogenase 3; RV2579, alpha-beta hydr	99.57
2gzs_A	278	IROE protein; enterobactin, salmochelin, DFP, hydr	99.57
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.57
1r3d_A	264	Conserved hypothetical protein VC1974; structural	99.57
3guu_A	462	Lipase A; protein structure, hydrolase; HET: 1PE;	99.57
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.56
3c8d_A	403	Enterochelin esterase; alpha-beta-alpha sandwich,	99.56
3fla_A	267	RIFR; alpha-beta hydrolase thioesterase, hydrolase	99.55
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	99.55
1ycd_A	243	Hypothetical 27.3 kDa protein in AAP1-SMF2 interge	99.55
1pja_A	302	Palmitoyl-protein thioesterase 2 precursor; hydrol	99.54
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.54
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.54
2q0x_A	335	Protein DUF1749, uncharacterized protein; alpha/be	99.54
1mj5_A	302	1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase;	99.54
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.53
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.53
3bdv_A	191	Uncharacterized protein DUF1234; DUF1234 family pr	99.53
2rau_A	354	Putative esterase; NP_343859.1, putative lipase, s	99.53
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.53
2psd_A	318	Renilla-luciferin 2-monooxygenase; alpha/beta-hydr	99.52
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.51
3l80_A	292	Putative uncharacterized protein SMU.1393C; alpha/	99.5
1isp_A	181	Lipase; alpha/beta hydrolase fold, hydrolase; 1.30	99.5
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.5
2wj6_A	276	1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid	99.49
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.49
3b12_A	304	Fluoroacetate dehalogenase; dehalogease, hydrolase	99.22
3qyj_A	291	ALR0039 protein; alpha/beta fold, hydrolase; 1.78A	99.47
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.44
3gff_A	331	IROE-like serine hydrolase; NP_718593.1, structura	99.43
3qmv_A	280	Thioesterase, REDJ; alpha/beta hydrolase fold, hyd	99.42
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.41
4i19_A	388	Epoxide hydrolase; structural genomics, PSI-biolog	99.41
3pic_A	375	CIP2; alpha/beta hydrolase fold, glucuronoyl ester	99.4
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.4
3c5v_A	316	PME-1, protein phosphatase methylesterase 1; demet	99.39
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.38
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.38
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.38
4fol_A	299	FGH, S-formylglutathione hydrolase; D-type esteras	99.37
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.37
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.36
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.34
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.33
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.33
1qe3_A	489	PNB esterase, para-nitrobenzyl esterase; alpha-bet	99.32
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.31
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.31
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	99.28
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.28
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.27
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.27
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.26
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.26
1tca_A	317	Lipase; hydrolase(carboxylic esterase); HET: NAG;	99.26
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.26
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.26
4g4g_A	433	4-O-methyl-glucuronoyl methylesterase; alpha/beta	99.25
3g02_A	408	Epoxide hydrolase; alpha/beta hydrolase fold, enan	99.25
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.24
3fle_A	249	SE_1780 protein; structural genomics, APC61035.1,	99.23
2d81_A	318	PHB depolymerase; alpha/beta hydrolase fold, circu	99.23
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.2
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.19
2k2q_B	242	Surfactin synthetase thioesterase subunit; A/B-hyd	99.19
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.19
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.19
3ils_A	265	PKS, aflatoxin biosynthesis polyketide synthase; A	99.17
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.16
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.15
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.15
3ds8_A	254	LIN2722 protein; unkonwn function, structural geno	99.13
3lp5_A	250	Putative cell surface hydrolase; structural genom	99.12
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.11
1kez_A	300	Erythronolide synthase; polyketide synthase, modul	99.1
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.1
3lcr_A	319	Tautomycetin biosynthetic PKS; alpha-beta hydrolas	99.09
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.09
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.07
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.06
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.05
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.05
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.05
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.05
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.04
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.04
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.03
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.02
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.01
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.01
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.01
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.01
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	98.98
1ei9_A	279	Palmitoyl protein thioesterase 1; alpha/beta hydro	98.96
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	98.96
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	98.96
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	98.95
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	98.95
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	98.93
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	98.92
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	98.91
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	98.91
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	98.9
1ukc_A	522	ESTA, esterase; fungi, A/B hydrolase fold, acetylc	98.9
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.89
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	98.88
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	98.88
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	98.88
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	98.87
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	98.87
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	98.86
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	98.84
1gpl_A	432	RP2 lipase; serine esterase, hydrolase, lipid degr	98.84
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	98.82
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.82
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	98.82
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	98.82
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	98.82
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.81
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	98.81
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	98.81
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	98.8
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	98.8
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.8
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	98.79
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	98.79
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	98.79
3icv_A	316	Lipase B, CALB; circular permutation, cleavage on	98.79
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	98.78
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	98.78
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	98.78
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	98.77
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	98.76
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	98.76
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	98.75
1llf_A	534	Lipase 3; candida cylindracea cholesterol esterase	98.75
2h7c_A	542	Liver carboxylesterase 1; enzyme, cholesteryl este	98.75
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	98.75
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	98.74
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	98.73
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	98.72
2ogt_A	498	Thermostable carboxylesterase EST50; alpha/beta hy	98.71
2cb9_A	244	Fengycin synthetase; thioesterase, non-ribosomal p	98.71
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	98.71
1thg_A	544	Lipase; hydrolase(carboxylic esterase); HET: NAG N	98.71
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	98.7
1bu8_A	452	Protein (pancreatic lipase related protein 2); hyd	98.7
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.7
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	98.68
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	98.67
2ha2_A	543	ACHE, acetylcholinesterase; hydrolase fold, serine	98.66
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	98.66
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	98.66
1w52_X	452	Pancreatic lipase related protein 2; detergent, cl	98.65
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	98.64
1jmk_C	230	SRFTE, surfactin synthetase; thioesterase, non-rib	98.64
2zyr_A	484	Lipase, putative; fatty acid, hydrolase; HET: 1PE;	98.64
3jrp_A	379	Fusion protein of protein transport protein SEC13	98.64
3jrp_A	379	Fusion protein of protein transport protein SEC13	98.63
1p0i_A	529	Cholinesterase; serine hydrolase, butyrate, hydrol	98.63
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.62
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	98.62
1ea5_A	537	ACHE, acetylcholinesterase; hydrolase, serine hydr	98.6
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	98.6
1ex9_A	285	Lactonizing lipase; alpha-beta hydrolase fold, pho	98.6
1hpl_A	449	Lipase; hydrolase(carboxylic esterase); 2.30A {Equ	98.59
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	98.59
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	98.59
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	98.58
1rp1_A	450	Pancreatic lipase related protein 1; hydrolase, li	98.58
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	98.57
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	98.56
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.56
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	98.55
2pm7_B	297	Protein transport protein SEC13, protein transport	98.54
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	98.54
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	98.53
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	98.53
3n2z_B	446	Lysosomal Pro-X carboxypeptidase; alpha/beta hydro	98.52
2fj0_A	551	JuvenIle hormone esterase; manduca sexta, alpha-be	98.52
1dx4_A	585	ACHE, acetylcholinesterase; hydrolase, serine este	98.52
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.5
1ys1_X	320	Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h	98.5
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	98.49
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.49
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.48
2pm7_B	297	Protein transport protein SEC13, protein transport	98.47
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.47
2bce_A	579	Cholesterol esterase; hydrolase, serine esterase,	98.46
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	98.46
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	98.46
3tej_A	329	Enterobactin synthase component F; nonribosomal pe	98.45
3bix_A	574	Neuroligin-1, neuroligin I; esterase domain, alpha	98.44
2hfk_A	319	Pikromycin, type I polyketide synthase pikaiv; alp	98.44
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	98.43
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	98.43
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.42
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.41
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	98.4
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	98.39
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	98.34
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	98.32
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	98.32
2x5x_A	342	PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE	98.32
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	98.3
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	98.28
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.27
3jro_A	753	Fusion protein of protein transport protein SEC13	98.26
2dst_A	131	Hypothetical protein TTHA1544; conserved hypotheti	98.26
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.25
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	98.25
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.25
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	98.24
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.24
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	98.23
3jro_A	753	Fusion protein of protein transport protein SEC13	98.23
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.23
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.22
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	98.18
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.17
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	98.16
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	98.16
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.16
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.16
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.14
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.13
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	98.12
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	98.11
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.1
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.08
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.08
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.08
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.08
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	98.07
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.01
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	98.01
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	98.0
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.99
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	97.95
1whs_A	255	Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T	97.95
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.94
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.93
2hih_A	431	Lipase 46 kDa form; A1 phospholipase, phospholipid	97.91
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.9
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	97.87
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	97.87
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.86
2dsn_A	387	Thermostable lipase; T1 lipase, hydrolase; 1.50A {	97.84
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	97.83
1ivy_A	452	Human protective protein; carboxypeptidase, serine	97.8
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	97.78
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	97.78
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	97.75
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.75
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	97.74
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	97.73
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	97.73
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	97.71
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	97.71
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	97.7
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	97.69
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	97.68
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	97.68
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.68
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	97.66
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	97.62
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	97.55
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	97.55
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.54
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.52
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.49
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	97.45
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	97.42
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	97.41
3tjm_A	283	Fatty acid synthase; thioesterase domain, fatty ac	97.25
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.21
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.12
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.12
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	97.1
1gxs_A	270	P-(S)-hydroxymandelonitrIle lyase chain A; inhibit	97.03
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	97.0
2qe8_A	343	Uncharacterized protein; structural genomics, join	96.97
2p4o_A	306	Hypothetical protein; putative lactonase, structur	96.94
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	96.91
4az3_A	300	Lysosomal protective protein 32 kDa chain; hydrola	96.9
2p4o_A	306	Hypothetical protein; putative lactonase, structur	96.9
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	96.88
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	96.87
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	96.82
1ac5_A	483	KEX1(delta)P; carboxypeptidase, hydrolase, glycopr	96.81
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	96.79
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	96.77
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	96.72
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	96.63
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	96.6
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	96.57
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	96.47
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	96.45
4ebb_A	472	Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2	96.44
1cpy_A	421	Serine carboxypeptidase; hydrolase (carboxypeptida	96.39
2qe8_A	343	Uncharacterized protein; structural genomics, join	96.38
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	96.35
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	96.3
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	96.3
3kya_A	496	Putative phosphatase; structural genomics, joint c	96.29

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=100.00  E-value=3e-61  Score=562.94  Aligned_cols=640  Identities=29%  Similarity=0.545  Sum_probs=482.5

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCcc--ccccCCCcceeEeeeecccce---
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVL--SRVNWANESVVAAWVNRVQNR---   82 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~w~~~~~~~~~~~r~~~~---   82 (790)
                      .+..++.|||||+.|+..   ++  .|+++...+++......   .........  ....|++|++.+.+....+.+   
T Consensus        17 ~~~~~~~w~~dg~~~~~~---~~--~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~   88 (740)
T 4a5s_A           17 LKLYSLRWISDHEYLYKQ---EN--NILVFNAEYGNSSVFLE---NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRH   88 (740)
T ss_dssp             CCCCCEEECSSSEEEEEE---TT--EEEEEETTTCCEEEEEC---TTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred             ccccccEECCCCcEEEEc---CC--cEEEEECCCCceEEEEe---chhhhhhcccccceEECCCCCEEEEEECCeeeEEE
Confidence            356789999999877652   43  56677766664111000   000011111  125679999877665543222   


Q ss_pred             ---eEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCC
Q psy463           83 ---ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK  159 (790)
Q Consensus        83 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~  159 (790)
                         ..+.+++..+++++.+....   ++   ...|+|||||++|+|.+.              ++||++++++++     
T Consensus        89 ~~~~~~~~~d~~~~~~~~l~~~~---~~---~~~~~~SPdG~~la~~~~--------------~~i~~~~~~~~~-----  143 (740)
T 4a5s_A           89 SYTASYDIYDLNKRQLITEERIP---NN---TQWVTWSPVGHKLAYVWN--------------NDIYVKIEPNLP-----  143 (740)
T ss_dssp             CEEEEEEEEETTTTEECCSSCCC---TT---EEEEEECSSTTCEEEEET--------------TEEEEESSTTSC-----
T ss_pred             ccceEEEEEECCCCcEEEcccCC---Cc---ceeeEECCCCCEEEEEEC--------------CeEEEEECCCCc-----
Confidence               45678899888876532211   11   246899999999999862              289999998874     


Q ss_pred             cceeccccceE--EE----------------EEEeeeccCCccEEEEecccCCC----------C--CCC----------
Q psy463          160 VPVPLTRGRFT--VT----------------EILAWDERENNPLLILSHNQESD----------G--STP----------  199 (790)
Q Consensus       160 ~~~~lt~~~~~--~~----------------~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~----------  199 (790)
                       ..+||.....  +.                .-..|+|+++. |+|.+.....-          .  ...          
T Consensus       144 -~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~  221 (740)
T 4a5s_A          144 -SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKA  221 (740)
T ss_dssp             -CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBT
T ss_pred             -eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCC
Confidence             5566553221  11                12578888876 77765432200          0  000          


Q ss_pred             --ccccceeEEEecCC---cccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEE
Q psy463          200 --VDSWDHLTFIDLDD---QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARI  273 (790)
Q Consensus       200 --~~~~~~l~~~~~~~---~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i  273 (790)
                        ......|+++|+++   ++..+   ..+++.+. ..          .....++..++|||||+ ++++.+|.++...|
T Consensus       222 G~~~~~~~l~v~d~~~~~~~~~~~---~~~l~~~~-~~----------~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i  287 (740)
T 4a5s_A          222 GAVNPTVKFFVVNTDSLSSVTNAT---SIQITAPA-SM----------LIGDHYLCDVTWATQERISLQWLRRIQNYSVM  287 (740)
T ss_dssp             TSCCCEEEEEEEETTSCCSSSCCC---EEEECCCH-HH----------HTSCEEEEEEEEEETTEEEEEEEESSTTEEEE
T ss_pred             cCcCCeeEEEEEECCCCCCCCcce---EEEecCCc-cC----------CCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEE
Confidence              01123799999998   73100   12222000 00          02567889999999999 77788888888889


Q ss_pred             EEEECCCCc----e---eEEEEEeCCCccccc--CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcc
Q psy463          274 TRCSINEGT----C---DVVFSRDLDRGWFEP--FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI  344 (790)
Q Consensus       274 ~~~~~~~g~----~---~~l~~~~~~~~~~~~--~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~  344 (790)
                      +++|+++|+    |   ..++.+ ...+|++.  ...|.|||||+.|+++.+   +++|      +.+||++++++++  
T Consensus       288 ~~~d~~tg~~~~~~~~~~~l~~~-~~~~~v~~~~~~~p~fspDG~~l~~~~s---~~~G------~~~l~~~~~~~~~--  355 (740)
T 4a5s_A          288 DICDYDESSGRWNCLVARQHIEM-STTGWVGRFRPSEPHFTLDGNSFYKIIS---NEEG------YRHICYFQIDKKD--  355 (740)
T ss_dssp             EEEEEETTTTEEEECGGGCEEEE-CSSSCSSSSSCCCCEECTTSSEEEEEEE---CTTS------CEEEEEEETTCSS--
T ss_pred             EEEECCCCccccceeEEEEeeec-cCCceEccCcCCCceEcCCCCEEEEEEE---cCCC------ceEEEEEECCCCc--
Confidence            999999998    3   344433 33567653  347999999999986777   6788      8899999999988  


Q ss_pred             cCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC--CCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEe
Q psy463          345 KDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFS  421 (790)
Q Consensus       345 ~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s  421 (790)
                          .++||.+.+++.....  +|++.|||.++.  +.+...+||++++++  ++. ++||+.+.   +..+.+..++||
T Consensus       356 ----~~~lT~g~~~v~~~~~--~d~~~i~f~~~~~~~~~~~~~ly~v~~~g--~~~~~~lt~~~~---~~~~~~~~~~~S  424 (740)
T 4a5s_A          356 ----CTFITKGTWEVIGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQLID--YTKVTCLSCELN---PERCQYYSVSFS  424 (740)
T ss_dssp             ----CEESCCSSSCEEEEEE--ECSSEEEEEESCGGGCTTCBEEEEEETTE--EEEEEESSTTTS---TTTBCBEEEEEC
T ss_pred             ----eEecccCCEEEEEEEE--EeCCEEEEEEecCCCCCceeEEEEEECCC--CCcceeeccccC---CCCCceEEEEEC
Confidence                8999999988876444  458999999987  667789999999987  443 47886321   135788999999


Q ss_pred             cCCcEEEEEeecCCCCeEEEEecCCCe-EEEeccchhHHHhhccCCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCC
Q psy463          422 TNVSYYVLSCIGPGIPEIMLFDKTGQR-LLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKK  500 (790)
Q Consensus       422 ~dg~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~  500 (790)
                      ||++++++.++++++|.+++++.++++ .+.++.++.+...+..+.++.++.+++ ..||.++.+++++|.+++  +.++
T Consensus       425 ~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~--~~~~  501 (740)
T 4a5s_A          425 KEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFD--KSKK  501 (740)
T ss_dssp             TTSSEEEEEECSBSSCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCC--TTSC
T ss_pred             CCCCEEEEEeCCCCCCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCC--CCCC
Confidence            999999999999889999999998754 466678887877888888888888888 669999999999999877  6788


Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      +|+||++||+++.+.+...|...+...+++++||+|+++|+||++++|..+.......++...++|+.++++++.+ .+.
T Consensus       502 ~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~-~~~  580 (740)
T 4a5s_A          502 YPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGF  580 (740)
T ss_dssp             EEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHT-STT
T ss_pred             ccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHh-cCC
Confidence            9999999999998766777777778777767899999999999999999998888888888899999999999997 788


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                      +|..||+|+||||||++++.++.++|+ +|+++++.+|+.++..+...+.+++++.|........|              
T Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~-~~~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~--------------  645 (740)
T 4a5s_A          581 VDNKRIAIWGWSYGGYVTSMVLGSGSG-VFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHY--------------  645 (740)
T ss_dssp             EEEEEEEEEEETHHHHHHHHHHTTTCS-CCSEEEEESCCCCGGGSBHHHHHHHHCCSSTTTTHHHH--------------
T ss_pred             cCCccEEEEEECHHHHHHHHHHHhCCC-ceeEEEEcCCccchHHhhhHHHHHHcCCCCccccHHHH--------------
Confidence            999999999999999999999998886 99999999999999888777777777655222222222              


Q ss_pred             CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCc-cEEEEecCCCccc
Q psy463          661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDK-QYLLVHGTMDDNV  739 (790)
Q Consensus       661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-P~Lii~G~~D~~v  739 (790)
                                                                         ...++...++++ ++ |+|++||+.|.+|
T Consensus       646 ---------------------------------------------------~~~~~~~~~~~i-~~~P~Lii~G~~D~~v  673 (740)
T 4a5s_A          646 ---------------------------------------------------RNSTVMSRAENF-KQVEYLLIHGTADDNV  673 (740)
T ss_dssp             ---------------------------------------------------HHSCSGGGGGGG-GGSEEEEEEETTCSSS
T ss_pred             ---------------------------------------------------HhCCHHHHHhcC-CCCcEEEEEcCCCCcc
Confidence                                                               222333667778 65 9999999999999


Q ss_pred             chhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          740 HFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       740 ~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      |++++.+++++|+++++++++++||+++|.+..  ...++++.+.+||+++|+
T Consensus       674 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~  726 (740)
T 4a5s_A          674 HFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS  726 (740)
T ss_dssp             CTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999999955  788999999999999874

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=100.00  E-value=2.7e-55  Score=513.93  Aligned_cols=647  Identities=25%  Similarity=0.482  Sum_probs=457.3

Q ss_pred             ecCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCC---CccccccCCCcceeEeeeecccc--
Q psy463            7 LSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLRE---PVLSRVNWANESVVAAWVNRVQN--   81 (790)
Q Consensus         7 ~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~w~~~~~~~~~~~r~~~--   81 (790)
                      .....++.|||||+.|+ ++ .++  .++++...+++...      ......   .....+.|++|++.+.+......  
T Consensus        16 ~~~~~~~~~spdg~~~~-~~-~dg--~i~~~d~~~g~~~~------~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~   85 (723)
T 1xfd_A           16 KIHDPEAKWISDTEFIY-RE-QKG--TVRLWNVETNTSTV------LIEGKKIESLRAIRYEISPDREYALFSYNVEPIY   85 (723)
T ss_dssp             CCCCCCCCBSSSSCBCC-CC-SSS--CEEEBCGGGCCCEE------EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred             cccccccEEcCCCcEEE-Ee-CCC--CEEEEECCCCcEEE------EeccccccccccceEEECCCCCEEEEEecCccce
Confidence            34567889999999664 32 333  67888877774111      111111   12455789999987766544322  


Q ss_pred             ----eeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCcc
Q psy463           82 ----RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIK  157 (790)
Q Consensus        82 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~  157 (790)
                          ...+.+++..+++++.+........+   ...++|||||++|+|.+.              ++||++++++++   
T Consensus        86 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~---~~~~~~SPdG~~la~~~~--------------~~i~~~~~~~g~---  145 (723)
T 1xfd_A           86 QHSYTGYYVLSKIPHGDPQSLDPPEVSNAK---LQYAGWGPKGQQLIFIFE--------------NNIYYCAHVGKQ---  145 (723)
T ss_dssp             SSCCCSEEEEEESSSCCCEECCCTTCCSCC---CSBCCBCSSTTCEEEEET--------------TEEEEESSSSSC---
T ss_pred             eecceeeEEEEECCCCceEeccCCcccccc---ccccEECCCCCEEEEEEC--------------CeEEEEECCCCc---
Confidence                25677888888877544332211111   246899999999999873              289999998874   


Q ss_pred             CCcceeccccce-EE-E----------------EEEeeeccCCccEEEEecccCCCC----------------------C
Q psy463          158 DKVPVPLTRGRF-TV-T----------------EILAWDERENNPLLILSHNQESDG----------------------S  197 (790)
Q Consensus       158 ~~~~~~lt~~~~-~~-~----------------~~~~~~~~~~~~~~~~~~~~~~~~----------------------~  197 (790)
                         ..+++.+.. .+ .                .-..|+|+++. ++|.+.......                      .
T Consensus       146 ---~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (723)
T 1xfd_A          146 ---AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKA  221 (723)
T ss_dssp             ---CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBT
T ss_pred             ---eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCE-EEEEEECCCccceEEeeccCCcCCCcceeccCCCC
Confidence               344544311 11 1                34678888775 666553211000                      0


Q ss_pred             CCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEE
Q psy463          198 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRC  276 (790)
Q Consensus       198 ~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~  276 (790)
                      +.......|+++|+++++.     ..+++.++ ..          .....++..+.|||||+ ++...++.++...|+++
T Consensus       222 G~~~~~~~l~~~d~~~~~~-----~~~l~~~~-~~----------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~  285 (723)
T 1xfd_A          222 GSENPSISLHVIGLNGPTH-----DLEMMPPD-DP----------RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLC  285 (723)
T ss_dssp             TSCCCEEEEEEEESSSSCC-----CEECCCCC-CG----------GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEE
T ss_pred             CCCCCeeEEEEEECCCCce-----eEEeeCCc-cC----------CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEE
Confidence            0001134899999988763     12332000 00          01256788999999999 44566776677789999


Q ss_pred             ECCCCceeEEEEEeCCCcccccC-CceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEE-cCCCCcccCCCcccccC
Q psy463          277 SINEGTCDVVFSRDLDRGWFEPF-DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFID-LDDQAGIKDKVPVPLTR  354 (790)
Q Consensus       277 ~~~~g~~~~l~~~~~~~~~~~~~-~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d-~~~~~~~~~~~~~~lt~  354 (790)
                      |+++|++..++.... .+|.... ..+.|||||+.|++..+   +.++..  ....+||++| .++++.   ...++|+.
T Consensus       286 d~~~g~~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~---~~~~~~--~~~~~l~~~d~~~~~~~---~~~~~l~~  356 (723)
T 1xfd_A          286 DATTGVCTKKHEDES-EAWLHRQNEEPVFSKDGRKFFFIRA---IPQGGR--GKFYHITVSSSQPNSSN---DNIQSITS  356 (723)
T ss_dssp             ETTTCCEEEEEEEEC-SSCCCCCCCCCEECTTSCSEEEEEE---ECCSSS--SCEEEEEEECSSCCSSS---CCCCBSCC
T ss_pred             eCCCCcceEEEEecc-CCEEeccCCCceEcCCCCeEEEEEe---cccCCC--cceeEEEEEeccCCCCc---cceeEeec
Confidence            999999887775432 3443211 47999999999997634   233310  1145899999 444420   00456887


Q ss_pred             CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecC
Q psy463          355 GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGP  434 (790)
Q Consensus       355 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~  434 (790)
                      +.+.+...++|||||+.|+|.+..+.+...+||.+++.+. .+.++|++.+.    ..+.+..++|||||+++++.++++
T Consensus       357 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~l~~~~~----~~~~~~~~~~spdg~~l~~~~~~~  431 (723)
T 1xfd_A          357 GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN-FNRQCLSCDLV----ENCTYFSASFSHSMDFFLLKCEGP  431 (723)
T ss_dssp             SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT-CCCBCSSTTSS----SSCCCCEEEECTTSSEEEEECCSS
T ss_pred             CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC-CCcceeccccc----CCCCeEEEEECCCCCEEEEEccCC
Confidence            6666665579999999999998875445589999998762 24556664210    234567899999999999999998


Q ss_pred             CCCeEEEEecCC-CeEEEeccchhHHHhhccCCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCc
Q psy463          435 GIPEIMLFDKTG-QRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSS  513 (790)
Q Consensus       435 ~~~~i~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~  513 (790)
                      +.|..++++... +.+..++.++.+...+....++.++.+.++..+| ++.++++.|.++.  ..+++|+||++||+++.
T Consensus       432 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~~--~~~~~p~vv~~HG~~~~  508 (723)
T 1xfd_A          432 GVPMVTVHNTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQILKPATFT--DTTHYPLLLVVDGTPGS  508 (723)
T ss_dssp             SSCCEEEEETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEEBCSSCC--SSSCEEEEEECCCCTTC
T ss_pred             CCCeEEEEECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEEeCCCCC--CCCccCEEEEEcCCCCc
Confidence            844444456544 5566677777666667788888888999999899 9999999999876  66789999999999987


Q ss_pred             cccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEech
Q psy463          514 FQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSY  593 (790)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~  593 (790)
                      ......|...+...+++++||+|+++|+||++++|..+.......++...++|+.++++++.+ .+.+|..||+|+||||
T Consensus       509 ~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~-~~~~d~~~i~l~G~S~  587 (723)
T 1xfd_A          509 QSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLK-EQYIDRTRVAVFGKDY  587 (723)
T ss_dssp             CCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHS-SSSEEEEEEEEEEETH
T ss_pred             cccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHh-CCCcChhhEEEEEECH
Confidence            544556665566677777899999999999999998887777777777789999999999987 6778889999999999


Q ss_pred             HHHHHHHHHhcC----CCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeec
Q psy463          594 GGYATGLALALD----PSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGT  669 (790)
Q Consensus       594 GG~~a~~~a~~~----p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~  669 (790)
                      ||++++.++.++    |+ +++++++.+|+.++..+...+.+.+++.+  ....                          
T Consensus       588 GG~~a~~~a~~~~~~~p~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------------------------  638 (723)
T 1xfd_A          588 GGYLSTYILPAKGENQGQ-TFTCGSALSPITDFKLYASAFSERYLGLH--GLDN--------------------------  638 (723)
T ss_dssp             HHHHHHHCCCCSSSTTCC-CCSEEEEESCCCCTTSSBHHHHHHHHCCC--SSCC--------------------------
T ss_pred             HHHHHHHHHHhccccCCC-eEEEEEEccCCcchHHhhhhccHhhcCCc--cCCh--------------------------
Confidence            999999999988    75 89999999999887655444444443332  1100                          


Q ss_pred             CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCC-ccEEEEecCCCcccchhhhHHHH
Q psy463          670 MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRD-KQYLLVHGTMDDNVHFQQSMMLA  748 (790)
Q Consensus       670 ~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~P~Lii~G~~D~~v~~~~~~~l~  748 (790)
                                                             ..+...++...++++ + +|+||+||++|..+|++++.+++
T Consensus       639 ---------------------------------------~~~~~~~~~~~~~~~-~~~P~lii~G~~D~~v~~~~~~~~~  678 (723)
T 1xfd_A          639 ---------------------------------------RAYEMTKVAHRVSAL-EEQQFLIIHPTADEKIHFQHTAELI  678 (723)
T ss_dssp             ---------------------------------------SSTTTTCTHHHHTSC-CSCEEEEEEETTCSSSCHHHHHHHH
T ss_pred             ---------------------------------------hHHHhcChhhHHhhc-CCCCEEEEEeCCCCCcCHhHHHHHH
Confidence                                                   011222333667788 7 89999999999999999999999


Q ss_pred             HHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          749 KSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       749 ~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      ++|++++.+++++++|+++|.+..  .++++++.+.+||+++|+
T Consensus       679 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~  722 (723)
T 1xfd_A          679 TQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR  722 (723)
T ss_dssp             HHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred             HHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence            999999999999999999999854  778999999999999875

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.5e-55  Score=508.97  Aligned_cols=633  Identities=32%  Similarity=0.577  Sum_probs=463.9

Q ss_pred             ecCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCC------ccccccCCCcceeEeeeeccc
Q psy463            7 LSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREP------VLSRVNWANESVVAAWVNRVQ   80 (790)
Q Consensus         7 ~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~~w~~~~~~~~~~~r~~   80 (790)
                      ......+.|||||+ +++.+ .  ...++++++.+++         ...+...      ....+.|++|++.+.+.....
T Consensus        15 ~~~~~~~~~s~dg~-~~~~~-~--d~~i~~~~~~~g~---------~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~   81 (719)
T 1z68_A           15 SYKTFFPNWISGQE-YLHQS-A--DNNIVLYNIETGQ---------SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYS   81 (719)
T ss_dssp             CCCCCCCEESSSSE-EEEEC-T--TSCEEEEESSSCC---------EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEE
T ss_pred             cCCCCccEECCCCe-EEEEc-C--CCCEEEEEcCCCc---------EEEEEccccccccceeeEEECCCCCeEEEEecCc
Confidence            34456889999995 55543 2  3468888888885         2222221      144578999998776655422


Q ss_pred             ------ceeEEEEeeCCCCee---eEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcC
Q psy463           81 ------NRARITRCSINEGTC---DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLD  151 (790)
Q Consensus        81 ------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~  151 (790)
                            ....+.+++..++++   +.+.         .....++|||||++|+|...              ++|++++++
T Consensus        82 ~~~~~s~~~~i~~~d~~~g~~~~~~~l~---------~~~~~~~~SPDG~~la~~~~--------------~~i~~~~~~  138 (719)
T 1z68_A           82 KLWRYSYTATYYIYDLSNGEFVRGNELP---------RPIQYLCWSPVGSKLAYVYQ--------------NNIYLKQRP  138 (719)
T ss_dssp             ECSSSCEEEEEEEEETTTTEECCSSCCC---------SSBCCEEECSSTTCEEEEET--------------TEEEEESST
T ss_pred             eeEEeecceEEEEEECCCCccccceecC---------cccccceECCCCCEEEEEEC--------------CeEEEEeCC
Confidence                  135678888888876   3321         11246899999999999851              289999998


Q ss_pred             CcCCccCCcceeccccce-E-EE----------------EEEeeeccCCccEEEEecccCCCC-----------------
Q psy463          152 DQAGIKDKVPVPLTRGRF-T-VT----------------EILAWDERENNPLLILSHNQESDG-----------------  196 (790)
Q Consensus       152 ~~~~~~~~~~~~lt~~~~-~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~-----------------  196 (790)
                      +++      ..+++.... . +.                .-..|+|+++. |+|.+.......                 
T Consensus       139 ~g~------~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~  211 (719)
T 1z68_A          139 GDP------PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTIN  211 (719)
T ss_dssp             TSC------CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred             CCC------cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCcccee
Confidence            874      344542211 1 11                24678888775 666554211100                 


Q ss_pred             -----CCCccccceeEEEecCCcccc---cCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcE-EEEEecc
Q psy463          197 -----STPVDSWDHLTFIDLDDQAGI---KDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVV-AAWVNRV  267 (790)
Q Consensus       197 -----~~~~~~~~~l~~~~~~~~~~~---~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~-~~~~~r~  267 (790)
                           .+-......|+++|+++++..   ++..+..++                 ....++..++|||||++ +...++.
T Consensus       212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~SpD~~~~~~~~~~~  274 (719)
T 1z68_A          212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA-----------------SSDYYFSWLTWVTDERVCLQWLKRV  274 (719)
T ss_dssp             EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH-----------------TSCEEEEEEEESSSSEEEEEEEESS
T ss_pred             ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC-----------------CCcceEEEeEEeCCCeEEEEEeccc
Confidence                 000012348999999987632   221122233                 45677899999999884 4445666


Q ss_pred             CcceEEEEEE----CCCCceeEEEE--EeCCCcccc--cCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcC
Q psy463          268 QNRARITRCS----INEGTCDVVFS--RDLDRGWFE--PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLD  339 (790)
Q Consensus       268 ~~~~~i~~~~----~~~g~~~~l~~--~~~~~~~~~--~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~  339 (790)
                      ++...|+++|    +++|+++.++.  .....+|+.  ....+.|||||+.|++..+   +.+|      ..+|++++++
T Consensus       275 ~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~g------~~~l~~~~~~  345 (719)
T 1z68_A          275 QNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFS---DKDG------YKHIHYIKDT  345 (719)
T ss_dssp             TTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEE---CTTS------CEEEEEESSC
T ss_pred             cCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEE---ccCC------ceEEEEEECC
Confidence            6677899999    88888876663  112244543  1237899999999987666   5667      7899999998


Q ss_pred             CCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC--CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEE
Q psy463          340 DQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG  417 (790)
Q Consensus       340 ~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~  417 (790)
                      +++      .++|+.+.+.+.....|  |++.|+|.+..  ..+...+||.++++++..+.++|++.+   .+..+.+..
T Consensus       346 ~~~------~~~lt~~~~~v~~~~~~--d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~---~~~~~~~~~  414 (719)
T 1z68_A          346 VEN------AIQITSGKWEAINIFRV--TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHL---RKERCQYYT  414 (719)
T ss_dssp             STT------CEECSCSSSCEEEEEEE--CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTT---TTTTBCBEE
T ss_pred             CCc------eEecccCceEEEEEEEE--eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCcc---CCCCCceEE
Confidence            887      88899887777664444  89999999976  333458999999865212457777532   113456778


Q ss_pred             EEEecCCcEEEEEeecCCCCeEEEEecCCCe-EEEeccchhHHHhhccCCCCceEEEEEEcCCCcEEEEEEEeCCCCCCC
Q psy463          418 ATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR-LLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTS  496 (790)
Q Consensus       418 ~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~  496 (790)
                      ++||||++++++.+++++.|.++++++++++ .+.+..|+.+...+....++.++.++++..+ .+++++++.|.++.  
T Consensus       415 ~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~P~~~~--  491 (719)
T 1z68_A          415 ASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-ITLWYKMILPPQFD--  491 (719)
T ss_dssp             EEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EEEEEEEEECTTCC--
T ss_pred             EEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-eEEEEEEEeCCCCC--
Confidence            9999999999999988887789999987654 5667777776666788888899999999977 99999999999876  


Q ss_pred             CCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463          497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE  576 (790)
Q Consensus       497 ~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~  576 (790)
                      +.+++|+||++||+++.......|...+...+++++||+|+++|+||++.++..+.......++...++|+.++++++.+
T Consensus       492 ~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~  571 (719)
T 1z68_A          492 RSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIE  571 (719)
T ss_dssp             SSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHT
T ss_pred             CCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHh
Confidence            56789999999999987544556665677777766899999999999999998888777777877889999999999998


Q ss_pred             hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhh
Q psy463          577 NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVD  656 (790)
Q Consensus       577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  656 (790)
                       .+.+|..|++|+||||||++++.++.++|+ +++++++.+|+.++..+...+.+++++.+....               
T Consensus       572 -~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~---------------  634 (719)
T 1z68_A          572 -MGFIDEKRIAIWGWSYGGYVSSLALASGTG-LFKCGIAVAPVSSWEYYASVYTERFMGLPTKDD---------------  634 (719)
T ss_dssp             -TSCEEEEEEEEEEETHHHHHHHHHHTTSSS-CCSEEEEESCCCCTTTSBHHHHHHHHCCSSTTT---------------
T ss_pred             -cCCCCCceEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCCccChHHhccccchhhcCCccccc---------------
Confidence             677888999999999999999999998875 899999999998876654444444444331000               


Q ss_pred             hccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCc-cEEEEecCC
Q psy463          657 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDK-QYLLVHGTM  735 (790)
Q Consensus       657 ~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-P~Lii~G~~  735 (790)
                                                                        ....|...++...++++ ++ |+|++||++
T Consensus       635 --------------------------------------------------~~~~~~~~~~~~~~~~~-~~~P~li~~G~~  663 (719)
T 1z68_A          635 --------------------------------------------------NLEHYKNSTVMARAEYF-RNVDYLLIHGTA  663 (719)
T ss_dssp             --------------------------------------------------THHHHHHTCSGGGGGGG-TTSEEEEEEETT
T ss_pred             --------------------------------------------------chhhhhhCCHhHHHhcC-CCCcEEEEEeCC
Confidence                                                              01112223333667788 76 999999999


Q ss_pred             CcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhhC
Q psy463          736 DDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       736 D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l~  790 (790)
                      |.+||+.++.+++++|+.++++++++++|+++|.+.. ..+++++.+.+||+++|+
T Consensus       664 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l~  719 (719)
T 1z68_A          664 DDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCFS  719 (719)
T ss_dssp             CSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHHHHHhhC
Confidence            9999999999999999999999999999999999955 688999999999999985

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=100.00  E-value=6.2e-54  Score=503.77  Aligned_cols=629  Identities=25%  Similarity=0.405  Sum_probs=454.2

Q ss_pred             CCceeEeCCCCCceEEEEecCC---ceeEEEecccCCCCCCCcCCCccc---------------cCCC---CccccccCC
Q psy463            9 SSSALWFSPSGNNLAYASFDDN---RTVIMTIPFYGNPGHPSSQYTQAI---------------NLRE---PVLSRVNWA   67 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~---------------~~~~---~~~~~~~w~   67 (790)
                      ...++.|||||++|||++..++   ...++++.+.+++...+.......               +...   .....+.|+
T Consensus        38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S  117 (741)
T 2ecf_A           38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS  117 (741)
T ss_dssp             CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred             CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence            4568999999999999987554   457899988877521111000000               0000   113457899


Q ss_pred             CcceeEeeeecccceeEEEEeeCCCC---eeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcE
Q psy463           68 NESVVAAWVNRVQNRARITRCSINEG---TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDH  144 (790)
Q Consensus        68 ~~~~~~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~  144 (790)
                      +|++.+.....    ..+.+++..++   .++.+...   ..   ....+.|||||++|+|.+.              ++
T Consensus       118 pDg~~l~~~~~----~~i~~~d~~~~~~~~~~~l~~~---~~---~~~~~~~SPDG~~la~~~~--------------~~  173 (741)
T 2ecf_A          118 PDAQRLLFPLG----GELYLYDLKQEGKAAVRQLTHG---EG---FATDAKLSPKGGFVSFIRG--------------RN  173 (741)
T ss_dssp             TTSSEEEEEET----TEEEEEESSSCSTTSCCBCCCS---SS---CEEEEEECTTSSEEEEEET--------------TE
T ss_pred             CCCCEEEEEeC----CcEEEEECCCCCcceEEEcccC---Cc---ccccccCCCCCCEEEEEeC--------------Cc
Confidence            99987766654    45677787766   44432221   11   1245799999999999862              28


Q ss_pred             EEEEEcCCcCCccCCcceeccccceE-E---------------EEEEeeeccCCccEEEEecccCCCC------------
Q psy463          145 LTFIDLDDQAGIKDKVPVPLTRGRFT-V---------------TEILAWDERENNPLLILSHNQESDG------------  196 (790)
Q Consensus       145 l~~~~~~~~~~~~~~~~~~lt~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~------------  196 (790)
                      ||++++++++      ..+++..... +               ..-..|+|+++. |+|.+.......            
T Consensus       174 i~~~d~~~g~------~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~  246 (741)
T 2ecf_A          174 LWVIDLASGR------QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRT  246 (741)
T ss_dssp             EEEEETTTTE------EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCE
T ss_pred             EEEEecCCCC------EEEeccCCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcc
Confidence            9999998874      3444443211 1               123578888775 666543211000            


Q ss_pred             ---------CCCccccceeEEEecCC-cccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE--
Q psy463          197 ---------STPVDSWDHLTFIDLDD-QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV--  264 (790)
Q Consensus       197 ---------~~~~~~~~~l~~~~~~~-~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~--  264 (790)
                               .+-......||++|+++ ++.      ..+..+              .....++..++| |||+.+++.  
T Consensus       247 ~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~------~~~~~~--------------~~~~~~~~~~~~-pDg~~l~~~~~  305 (741)
T 2ecf_A          247 DVIEQRYPAAGDANVQVKLGVISPAEQAQT------QWIDLG--------------KEQDIYLARVNW-RDPQHLSFQRQ  305 (741)
T ss_dssp             EEEEEECCBTTSCCCEEEEEEECSSTTCCC------EEECCC--------------SCSSEEEEEEEE-EETTEEEEEEE
T ss_pred             cceEeecCCCCCCCCeeEEEEEECCCCCce------EEecCC--------------CCcceEEEEEEe-CCCCEEEEEEe
Confidence                     00001223899999988 763      222200              023567889999 999944443  


Q ss_pred             eccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcc
Q psy463          265 NRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI  344 (790)
Q Consensus       265 ~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~  344 (790)
                      ++.++...|+++|+++++++.++.... ..|......+.|||||+ +++..+    .+|      ..+||.++++++   
T Consensus       306 ~~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~~~~~~~~~~spdg~-~~~~~~----~~g------~~~l~~~~~~~~---  370 (741)
T 2ecf_A          306 SRDQKKLDLVEVTLASNQQRVLAHETS-PTWVPLHNSLRFLDDGS-ILWSSE----RTG------FQHLYRIDSKGK---  370 (741)
T ss_dssp             ETTSSEEEEEEEETTTCCEEEEEEEEC-SSCCCCCSCCEECTTSC-EEEEEC----TTS------SCEEEEECSSSC---
T ss_pred             cccCCeEEEEEEECCCCceEEEEEcCC-CCcCCcCCceEECCCCe-EEEEec----CCC------ccEEEEEcCCCC---
Confidence            455566789999999999988877643 34543356899999999 554544    566      679999997543   


Q ss_pred             cCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCC
Q psy463          345 KDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNV  424 (790)
Q Consensus       345 ~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg  424 (790)
                          .+.|+.+.+.+.....|+|||+.|+|.+..+.+...+||.++..+  +..++|+.        ...+..++|||||
T Consensus       371 ----~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g--~~~~~l~~--------~~~~~~~~~spdg  436 (741)
T 2ecf_A          371 ----AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG--GQPQRLSK--------APGMHSASFARNA  436 (741)
T ss_dssp             ----EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC--CCCEECCC--------SCSEEEEEECTTS
T ss_pred             ----eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC--CCeeeccc--------CCCceEEEECCCC
Confidence                567888777776645799999999999887544457899999876  55666764        2345689999999


Q ss_pred             cEEEEEeecCC-CCeEEEEecCCCeEEEeccchh-HHH-hhccC--CCCceEEEEEEcCCC-cEEEEEEEeCCCCCCCCC
Q psy463          425 SYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNED-LRT-ALTNI--TLPSVEYMSVPIQPN-MEAQVKLFLPPGIDTSGH  498 (790)
Q Consensus       425 ~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~-~~~-~~~~~--~~~~~~~~~~~~~dg-~~i~~~~~~P~~~~~~~~  498 (790)
                      +++++.+++.. ++++++++.+++.++.++.++. +.. .+...  .++..+.+.++..+| ..++++++.|.++.  +.
T Consensus       437 ~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~~--~~  514 (741)
T 2ecf_A          437 SVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFD--PA  514 (741)
T ss_dssp             SEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEEEEEECCSSCC--TT
T ss_pred             CEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEEEEEEcCCCCEEEEEEEEeCCCCC--CC
Confidence            99999998888 8899999998887777765543 111 23444  677889999999999 99999999998765  56


Q ss_pred             CCccEEEEEcCCCCccccccccccc---hHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVD---WNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQ  575 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~---~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~  575 (790)
                      +++|+||++||+++.......|...   .....++++||.|+++|+||++.++..+.......++...++|+.++++++.
T Consensus       515 ~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~  594 (741)
T 2ecf_A          515 KRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLK  594 (741)
T ss_dssp             SCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHH
Confidence            7789999999998875434455533   2344455589999999999999988888777777777788999999999999


Q ss_pred             HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchh
Q psy463          576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV  655 (790)
Q Consensus       576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  655 (790)
                      + .+.+|..||+|+||||||++++.++.++|+ +++++++.+|+.++..+...+.+.+++.+  ....            
T Consensus       595 ~-~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------  658 (741)
T 2ecf_A          595 Q-QPWVDPARIGVQGWSNGGYMTLMLLAKASD-SYACGVAGAPVTDWGLYDSHYTERYMDLP--ARND------------  658 (741)
T ss_dssp             T-STTEEEEEEEEEEETHHHHHHHHHHHHCTT-TCSEEEEESCCCCGGGSBHHHHHHHHCCT--GGGH------------
T ss_pred             h-cCCCChhhEEEEEEChHHHHHHHHHHhCCC-ceEEEEEcCCCcchhhhccccchhhcCCc--ccCh------------
Confidence            8 667888999999999999999999999885 89999999999887655444444443332  1111            


Q ss_pred             hhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCC
Q psy463          656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTM  735 (790)
Q Consensus       656 ~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~  735 (790)
                                                                           ..|...++...++++ ++|+|++||++
T Consensus       659 -----------------------------------------------------~~~~~~~~~~~~~~i-~~P~lii~G~~  684 (741)
T 2ecf_A          659 -----------------------------------------------------AGYREARVLTHIEGL-RSPLLLIHGMA  684 (741)
T ss_dssp             -----------------------------------------------------HHHHHHCSGGGGGGC-CSCEEEEEETT
T ss_pred             -----------------------------------------------------hhhhhcCHHHHHhhC-CCCEEEEccCC
Confidence                                                                 112222333667888 89999999999


Q ss_pred             CcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhhC
Q psy463          736 DDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       736 D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l~  790 (790)
                      |.++|+.++..++++|+..+++++++++|+++|.+.. ...++++.+.+||+++|+
T Consensus       685 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l~  740 (741)
T 2ecf_A          685 DDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRCLK  740 (741)
T ss_dssp             CSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999986 448899999999999985

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=100.00  E-value=1.3e-50  Score=472.79  Aligned_cols=615  Identities=23%  Similarity=0.401  Sum_probs=436.9

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCC--CCCcCCCccc-----------cCCCCccccccCCCcceeEeee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPG--HPSSQYTQAI-----------NLREPVLSRVNWANESVVAAWV   76 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~-----------~~~~~~~~~~~w~~~~~~~~~~   76 (790)
                      ...+.|+  |+.+++.+. ++   | ++....|+.  ..+. .+...           +........+.|++| ..+...
T Consensus        28 ~~~~~w~--g~~~~~~~~-~~---i-~~d~~tg~~~~~~l~-~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~   98 (706)
T 2z3z_A           28 VVGLQWM--GDNYVFIEG-DD---L-VFNKANGKSAQTTRF-SAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF   98 (706)
T ss_dssp             CTTCEEE--TTEEEEEET-TE---E-EEEC-------CEEE-EHHHHHTTC-----------CCCEEEEETTT-TEEEEE
T ss_pred             CCCCcCc--CCeEEEEeC-Cc---E-EEECCCCcEeeEEee-chhHhhhhccchhccccccccCceeEEECCC-CeEEEE
Confidence            3667899  777777653 33   5 666655642  1110 00000           001123445678888 544444


Q ss_pred             ecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCC----
Q psy463           77 NRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD----  152 (790)
Q Consensus        77 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~----  152 (790)
                      ..    ..+.+++..+++++.+.....      ....+.|||||++|+|...              ++||++++++    
T Consensus        99 ~~----~~i~~~d~~~~~~~~l~~~~~------~~~~~~~SpdG~~la~~~~--------------~~i~v~~~~~~~~~  154 (706)
T 2z3z_A           99 TQ----GGLVGFDMLARKVTYLFDTNE------ETASLDFSPVGDRVAYVRN--------------HNLYIARGGKLGEG  154 (706)
T ss_dssp             ET----TEEEEEETTTTEEEEEECCTT------CCTTCEECTTSSEEEEEET--------------TEEEEEECBCTTSC
T ss_pred             EC----CEEEEEECCCCceEEccCCcc------cccCCcCCCCCCEEEEEEC--------------CeEEEEecCccccc
Confidence            32    467788888887665543211      1246899999999999641              2899999987    


Q ss_pred             -cCCccCCcceeccccceE-E-------------EEEEeeeccCCccEEEEecccCCCC---------------------
Q psy463          153 -QAGIKDKVPVPLTRGRFT-V-------------TEILAWDERENNPLLILSHNQESDG---------------------  196 (790)
Q Consensus       153 -~~~~~~~~~~~lt~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~---------------------  196 (790)
                       ++      ..+++..... +             ..-..|+|+++. ++|.+.......                     
T Consensus       155 ~g~------~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~  227 (706)
T 2z3z_A          155 MSR------AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC-LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPM  227 (706)
T ss_dssp             CCC------CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE-EEEEEEECTTSCCEEEEECCSSSCEEEEECCCB
T ss_pred             CCC------cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCceEEeeCCC
Confidence             64      3344433221 2             133578888764 555542111000                     


Q ss_pred             CCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEE--EeccCcceEEE
Q psy463          197 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAW--VNRVQNRARIT  274 (790)
Q Consensus       197 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~--~~r~~~~~~i~  274 (790)
                      .+-......|+++|+++++.+      .++.+              .....++..+.|||||+.+++  .++.++...|+
T Consensus       228 ~g~~~~~~~l~~~d~~~~~~~------~~~~~--------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~  287 (706)
T 2z3z_A          228 AGTPSHHVTVGIYHLATGKTV------YLQTG--------------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVN  287 (706)
T ss_dssp             TTSCCCEEEEEEEETTTTEEE------ECCCC--------------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEE
T ss_pred             CCCCCCeeEEEEEECCCCceE------eeccC--------------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEE
Confidence            000013368999999987632      22200              023467889999999995444  34555567899


Q ss_pred             EEECCCC-ceeEEEEEeCCCcccccCCceeEcc--CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          275 RCSINEG-TCDVVFSRDLDRGWFEPFDHLRFSS--DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       275 ~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~sp--Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      ++|+.+| ..+.+..... ..|......+.|||  ||+.|+ ..+    .+|      ..+||.++.+++.      .+.
T Consensus       288 ~~d~~~g~~~~~~~~~~~-~~~~~~~~~~~~sp~~dg~~l~-~~~----~~g------~~~l~~~~~~~~~------~~~  349 (706)
T 2z3z_A          288 AYDAETGRFVRTLFVETD-KHYVEPLHPLTFLPGSNNQFIW-QSR----RDG------WNHLYLYDTTGRL------IRQ  349 (706)
T ss_dssp             EEETTTCCEEEEEEEEEC-SSCCCCCSCCEECTTCSSEEEE-EEC----TTS------SCEEEEEETTSCE------EEE
T ss_pred             EEECCCCceeeEEEEccC-CCeECccCCceeecCCCCEEEE-EEc----cCC------ccEEEEEECCCCE------EEe
Confidence            9999999 6666655432 44544445789999  998544 443    556      6799999987766      788


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      |+.+.+.+...++|+|||+.|+|.+....+...+||.+++++  ++.++|++        ...+..++|||||+++++.+
T Consensus       350 l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~--------~~~~~~~~~spdg~~l~~~~  419 (706)
T 2z3z_A          350 VTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG--GKTKDLTP--------ESGMHRTQLSPDGSAIIDIF  419 (706)
T ss_dssp             CCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC--CCCEESCC--------SSSEEEEEECTTSSEEEEEE
T ss_pred             cCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC--CCceeccC--------CCceEEEEECCCCCEEEEEe
Confidence            988877776657999999999999987554457999999987  66677764        23577899999999999998


Q ss_pred             ecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEcCCC-cEEEEEEEeCCCCCCCCCCCccEEEEEcC
Q psy463          432 IGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPN-MEAQVKLFLPPGIDTSGHKKYPLLIHVYG  509 (790)
Q Consensus       432 ~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg-~~i~~~~~~P~~~~~~~~~~~p~vv~~HG  509 (790)
                      ++.+ ++.++++++++++...++...    .+....++..+.+.+...+| .++.++++.|.+++  +.+++|+||++||
T Consensus       420 ~~~~~p~~i~l~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~--~~~~~p~iv~~HG  493 (706)
T 2z3z_A          420 QSPTVPRKVTVTNIGKGSHTLLEAKN----PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFD--PAKKYPVIVYVYG  493 (706)
T ss_dssp             ECSSCSCEEEEEESSSCEEEEEECC----------CCCCEEEEEEECTTSSSEEEEEEECCTTCC--TTSCEEEEEECCC
T ss_pred             cCCCCCcEEEEEECCCCeEeeccccc----hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCC--CCCCccEEEEecC
Confidence            8776 888999999887754444332    24566778889999999999 89999999999876  5678999999999


Q ss_pred             CCCccccccccccc---hHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCce
Q psy463          510 GPSSFQVTERFSVD---WNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRT  586 (790)
Q Consensus       510 ~~~~~~~~~~~~~~---~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri  586 (790)
                      +++.......|...   +...++ ++||.|+++|+||++.++..+.......++...++|+.++++++.+ .+.+|.+|+
T Consensus       494 g~~~~~~~~~~~~~~~~~~~~la-~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i  571 (706)
T 2z3z_A          494 GPHAQLVTKTWRSSVGGWDIYMA-QKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKS-QSWVDADRI  571 (706)
T ss_dssp             CTTCCCCCSCC----CCHHHHHH-HTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHT-STTEEEEEE
T ss_pred             CCCceeeccccccCchHHHHHHH-hCCcEEEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHh-CCCCCchhe
Confidence            98876444556543   444444 4899999999999999998887777778887889999999999987 677888999


Q ss_pred             EEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEE
Q psy463          587 AIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLV  666 (790)
Q Consensus       587 ~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~  666 (790)
                      +|+||||||++++.++.++|+ +++++++.+|+.++..+...+.+++++.+  ...+..                     
T Consensus       572 ~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------------------  627 (706)
T 2z3z_A          572 GVHGWSYGGFMTTNLMLTHGD-VFKVGVAGGPVIDWNRYAIMYGERYFDAP--QENPEG---------------------  627 (706)
T ss_dssp             EEEEETHHHHHHHHHHHHSTT-TEEEEEEESCCCCGGGSBHHHHHHHHCCT--TTCHHH---------------------
T ss_pred             EEEEEChHHHHHHHHHHhCCC-cEEEEEEcCCccchHHHHhhhhhhhcCCc--ccChhh---------------------
Confidence            999999999999999999885 89999999999988766555555554443  211111                     


Q ss_pred             eecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHH
Q psy463          667 HGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMM  746 (790)
Q Consensus       667 ~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~  746 (790)
                                                                  +...++...++++ ++|+|++||++|.++|++++.+
T Consensus       628 --------------------------------------------~~~~~~~~~~~~i-~~P~lii~G~~D~~v~~~~~~~  662 (706)
T 2z3z_A          628 --------------------------------------------YDAANLLKRAGDL-KGRLMLIHGAIDPVVVWQHSLL  662 (706)
T ss_dssp             --------------------------------------------HHHHCGGGGGGGC-CSEEEEEEETTCSSSCTHHHHH
T ss_pred             --------------------------------------------hhhCCHhHhHHhC-CCCEEEEeeCCCCCCCHHHHHH
Confidence                                                        2222333667888 8999999999999999999999


Q ss_pred             HHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          747 LAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       747 l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      ++++|+.++++++++++|+++|.+.. .++++++.+.+||+++|
T Consensus       663 ~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l  706 (706)
T 2z3z_A          663 FLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTDHL  706 (706)
T ss_dssp             HHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999987 67899999999999986

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=100.00  E-value=3e-49  Score=449.83  Aligned_cols=545  Identities=16%  Similarity=0.141  Sum_probs=385.2

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...+..|||||++|||++.+++..++|.+  .|++         .++++.+....                         
T Consensus        23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~--~~g~---------~~~lt~~~~~~-------------------------   66 (582)
T 3o4h_A           23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLY--DGGE---------TVKLNREPINS-------------------------   66 (582)
T ss_dssp             CEEEEEEEETTTEEEEEEEETTEEEEEEE--ETTE---------EEECCSSCCSE-------------------------
T ss_pred             chheeecCCCCCeEEEEEccCCceeEEEE--cCCC---------cEeeecccccc-------------------------
Confidence            34677899999999999998999999996  5663         33433221100                         


Q ss_pred             eCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEc--CCcCCccCCcceeccc
Q psy463           89 SINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL--DDQAGIKDKVPVPLTR  166 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~--~~~~~~~~~~~~~lt~  166 (790)
                                            ...|+||||  +++|++....+. +      ..+||.+++  +++       ..+++.
T Consensus        67 ----------------------~~~~~~spd--~~l~~~~~~~g~-~------~~~l~~~~~~~~g~-------~~~l~~  108 (582)
T 3o4h_A           67 ----------------------VLDPHYGVG--RVILVRDVSKGA-E------QHALFKVNTSRPGE-------EQRLEA  108 (582)
T ss_dssp             ----------------------ECEECTTCS--EEEEEEECSTTS-C------CEEEEEEETTSTTC-------CEECTT
T ss_pred             ----------------------cccccCCCC--eEEEEeccCCCC-c------ceEEEEEeccCCCc-------cccccC
Confidence                                  024688999  678877642211 1      227999998  544       235555


Q ss_pred             cceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCC
Q psy463          167 GRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVE  246 (790)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~  246 (790)
                      +....  ...|.++++. ++|++...           ..++++|+++++      .++++                 ...
T Consensus       109 ~~~~~--~~~~s~dg~~-~~~~s~~~-----------~~~~l~d~~~g~------~~~l~-----------------~~~  151 (582)
T 3o4h_A          109 VKPMR--ILSGVDTGEA-VVFTGATE-----------DRVALYALDGGG------LRELA-----------------RLP  151 (582)
T ss_dssp             SCSBE--EEEEEECSSC-EEEEEECS-----------SCEEEEEEETTE------EEEEE-----------------EES
T ss_pred             CCCce--eeeeCCCCCe-EEEEecCC-----------CCceEEEccCCc------EEEee-----------------cCC
Confidence            43322  4477776654 66665431           234456888876      44554                 222


Q ss_pred             CEEEEEEEccCCcEEEE-EeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          247 PVLSRVNWANESVVAAW-VNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~-~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      .  ..+.|||||+.+++ ..+..+...|+++|+++|+.+.|+...   +.   ...++|||||+.|+ ..    +.+|  
T Consensus       152 ~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~---~~---~~~~~~SpDG~~l~-~~----~~~~--  216 (582)
T 3o4h_A          152 G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGE---GS---FSSASISPGMKVTA-GL----ETAR--  216 (582)
T ss_dssp             S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSS---CE---EEEEEECTTSCEEE-EE----ECSS--
T ss_pred             C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCC---Cc---cccceECCCCCEEE-Ec----cCCC--
Confidence            2  57899999995554 444444466999999999988776432   11   35799999999998 33    3556  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEe--------eecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILA--------WDEKENNVYFLSTQGSPIVQHMYRINIADPTAT  397 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~--------~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~  397 (790)
                          ..+|+++|+++++      .+.++.....+.. +.        |+||| .++|.+....  ..+||.+   +   +
T Consensus       217 ----~~~i~~~d~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~spdg-~~~~~~~~~g--~~~l~~~---g---~  276 (582)
T 3o4h_A          217 ----EARLVTVDPRDGS------VEDLELPSKDFSS-YRPTAITWLGYLPDG-RLAVVARREG--RSAVFID---G---E  276 (582)
T ss_dssp             ----CEEEEEECTTTCC------EEECCCSCSHHHH-HCCSEEEEEEECTTS-CEEEEEEETT--EEEEEET---T---E
T ss_pred             ----eeEEEEEcCCCCc------EEEccCCCcChhh-hhhccccceeEcCCC-cEEEEEEcCC--cEEEEEE---C---C
Confidence                6789999999887      5544433332222 44        99999 6777776532  3677776   3   2


Q ss_pred             cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEc
Q psy463          398 PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPI  477 (790)
Q Consensus       398 ~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  477 (790)
                      ... +        ....+..++|| |++.++...+...++++++++..+ +.+.+..++.     ....+...+.++++.
T Consensus       277 ~~~-~--------~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l~~~~~-----~~~~~~~~~~~~~~~  340 (582)
T 3o4h_A          277 RVE-A--------PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEGGLPED-----LRRSIAGSRLVWVES  340 (582)
T ss_dssp             EEC-C--------CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECCCCCHH-----HHHTEEEEEEEEEEC
T ss_pred             eec-c--------CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEEecCCc-----cccccCcceEEEEEC
Confidence            111 1        12356788999 888775444444489999999877 5555522211     014566788899999


Q ss_pred             CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463          478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR  557 (790)
Q Consensus       478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~  557 (790)
                      .+|.+++++++.|.+..    .++|+||++||+++... ...|  ......++++||.|+++|+||++++|..+......
T Consensus       341 ~~g~~i~~~~~~p~~~~----~~~p~vv~~HG~~~~~~-~~~~--~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~  413 (582)
T 3o4h_A          341 FDGSRVPTYVLESGRAP----TPGPTVVLVHGGPFAED-SDSW--DTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIG  413 (582)
T ss_dssp             TTSCEEEEEEEEETTSC----SSEEEEEEECSSSSCCC-CSSC--CHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTT
T ss_pred             CCCCEEEEEEEcCCCCC----CCCcEEEEECCCccccc-cccc--CHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhh
Confidence            99999999999998744    37899999999987643 2333  34445555689999999999999999998887777


Q ss_pred             cCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          558 RLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       558 ~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                      .++...++|+.++++++.+ .+.+|  +++|+||||||++++.++.++|+ +++++++.+|+.++..+..        ..
T Consensus       414 ~~~~~~~~d~~~~~~~l~~-~~~~d--~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~~~~~~~~--------~~  481 (582)
T 3o4h_A          414 DPCGGELEDVSAAARWARE-SGLAS--ELYIMGYSYGGYMTLCALTMKPG-LFKAGVAGASVVDWEEMYE--------LS  481 (582)
T ss_dssp             CTTTHHHHHHHHHHHHHHH-TTCEE--EEEEEEETHHHHHHHHHHHHSTT-TSSCEEEESCCCCHHHHHH--------TC
T ss_pred             hcccccHHHHHHHHHHHHh-CCCcc--eEEEEEECHHHHHHHHHHhcCCC-ceEEEEEcCCccCHHHHhh--------cc
Confidence            7877889999999999998 56676  99999999999999999998885 8999999999887642110        00


Q ss_pred             CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                           ...+.                                 .+...            +.+     .....+...++.
T Consensus       482 -----~~~~~---------------------------------~~~~~------------~~~-----~~~~~~~~~sp~  506 (582)
T 3o4h_A          482 -----DAAFR---------------------------------NFIEQ------------LTG-----GSREIMRSRSPI  506 (582)
T ss_dssp             -----CHHHH---------------------------------HHHHH------------HTT-----TCHHHHHHTCGG
T ss_pred             -----cchhH---------------------------------HHHHH------------HcC-----cCHHHHHhcCHH
Confidence                 00000                                 00000            000     122334445556


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      ..++++ ++|+|++||++|..+|+.++++++++|+.+|++++++++|+++|.+..  ...++++.+.+||+++|+
T Consensus       507 ~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l~  580 (582)
T 3o4h_A          507 NHVDRI-KEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE  580 (582)
T ss_dssp             GGGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHhcC-CCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHcC
Confidence            778899 999999999999999999999999999999999999999999999985  778999999999999985

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=100.00  E-value=5.7e-46  Score=430.07  Aligned_cols=529  Identities=16%  Similarity=0.209  Sum_probs=371.4

Q ss_pred             ccc--cCCce-EEEEeecCCCCCCCCCCcCCcEEEEEEcC--C-cCCccCCcceeccccc----eEEEEEEeeeccCCcc
Q psy463          115 RFS--SDGKK-MLLILSHNQESDGSTPVDSWDHLTFIDLD--D-QAGIKDKVPVPLTRGR----FTVTEILAWDERENNP  184 (790)
Q Consensus       115 ~~s--pdg~~-i~~~~~~~~~~~~~~~~g~~~~l~~~~~~--~-~~~~~~~~~~~lt~~~----~~~~~~~~~~~~~~~~  184 (790)
                      .|+  |||++ |+|.+...            .+||+++++  + +.      ..+|+...    .....-..|+++++. 
T Consensus        83 ~~~~SPDg~~~la~~~~~~------------~~l~~~~~~~~g~~~------~~~l~~~~~~~~~~~~~~~~~spDg~~-  143 (662)
T 3azo_A           83 AGVPRPAGGPLLVFTHFGD------------QRLYAFEPDAPGGAV------PRPLTPVSAVGGGLRWADPVLLPERGE-  143 (662)
T ss_dssp             EEECCSSSSCEEEEEBTTT------------CCEEEECTTSTTCCC------CEECSCCCCSTTCEEEEEEEEETTTTE-
T ss_pred             eeeeecCCCeEEEEEECCC------------CeEEEEcCCCCCCCC------CEeccCCccCCCCccccCcEECCCCCE-
Confidence            455  99999 99977442            279999987  4 53      45666631    223334688888774 


Q ss_pred             EEEEecccCCCCCCCccccceeEEEecCC------cccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCC
Q psy463          185 LLILSHNQESDGSTPVDSWDHLTFIDLDD------QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANES  258 (790)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg  258 (790)
                      |+|.+......  .......+||++++++      ++      ..+++.                ........++|||||
T Consensus       144 l~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~------~~~l~~----------------~~~~~~~~~~~SpDG  199 (662)
T 3azo_A          144 VWCMAEEFTGE--GPSDVRRFLAAVPLDGSAAADRSA------VRELSD----------------DAHRFVTGPRLSPDG  199 (662)
T ss_dssp             EEEEEEEECSS--STTCEEEEEEEEETTSTTTTCGGG------SEESSC----------------SCSSEECCCEECTTS
T ss_pred             EEEEEecccCC--CCCCceeEEEEEECCCCccccCCc------eeEEEe----------------cCCCcccCceECCCC
Confidence            66665431110  0012336899999998      55      333330                123456679999999


Q ss_pred             cEEEEEeccC-----cceEEEEEECC-CC---ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          259 VVAAWVNRVQ-----NRARITRCSIN-EG---TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       259 ~~~~~~~r~~-----~~~~i~~~~~~-~g---~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      +.+++.....     +...|++++++ +|   +.+.++....  .   ....+.|||||+ |+|+..    .+|      
T Consensus       200 ~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~--~---~~~~~~~spdg~-l~~~~~----~~~------  263 (662)
T 3azo_A          200 RQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE--E---AIAQAEWAPDGS-LIVATD----RTG------  263 (662)
T ss_dssp             SEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT--B---CEEEEEECTTSC-EEEEEC----TTS------
T ss_pred             CEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC--c---eEcceEECCCCe-EEEEEC----CCC------
Confidence            9666655332     23579999999 57   6666665421  1   134799999999 775554    456      


Q ss_pred             ccEEEEEEcCCCCcccCCCcccccCCCeEEe--------EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT--------EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~--------~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                      ..+||++|+++++      .++|+.+.....        ..++|+|+++ ++|.+..+   ..+||.+++++  ++.+.|
T Consensus       264 ~~~l~~~~~~~~~------~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~~---~~~l~~~d~~~--~~~~~l  331 (662)
T 3azo_A          264 WWNLHRVDPATGA------ATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGKG---AAVLGILDPES--GELVDA  331 (662)
T ss_dssp             SCEEEEECTTTCC------EEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBSS---SCEEEEEETTT--TEEEEC
T ss_pred             CeEEEEEECCCCc------eeecccccccccCccccccCceEeEeCCCE-EEEEEEcC---ccEEEEEECCC--CcEEEe
Confidence            5689999998877      777776543331        1245567776 55555543   37999999887  566666


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEcCCC
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPN  480 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg  480 (790)
                      +.       ....+..+ +++|++.+++.+.+.+ ++.||++++++++.+.++....  ..+....+..++.+.+...+|
T Consensus       332 ~~-------~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~dg  401 (662)
T 3azo_A          332 AG-------PWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHT--DPVDPAYYPEPQIRTFTAPDG  401 (662)
T ss_dssp             CS-------SCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCC--CSSCGGGSCCCEEEEEECTTS
T ss_pred             cC-------CCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCc--ccCCccccCcceEEEEEcCCC
Confidence            54       22233322 2788888888887777 8899999998887776643321  123444566788899998899


Q ss_pred             cEEEEEEEeCCCCCC--CCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          481 MEAQVKLFLPPGIDT--SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~--~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      ..++++++.|.+...  ...+++|+||++||+++... ...|.  .....++++||+|+++|+||++++|.++.......
T Consensus       402 ~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~--~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~  478 (662)
T 3azo_A          402 REIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRV-PAVLD--LDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGR  478 (662)
T ss_dssp             CEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCC-CCSCC--HHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTT
T ss_pred             CEEEEEEECCCCccccCCCCCCccEEEEECCCCCccC-cccch--HHHHHHHhCCCEEEEECCCCCCCccHHHHHhhccc
Confidence            999999999986410  02357899999999987643 22333  34455666899999999999999999988777777


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                      ++...++|+.++++++++ .+.+|..|++|+||||||++++.++.+ | ++|+++++.+|+.++..+...       .. 
T Consensus       479 ~~~~~~~d~~~~~~~l~~-~~~~~~~~i~l~G~S~GG~~a~~~~~~-~-~~~~~~v~~~~~~~~~~~~~~-------~~-  547 (662)
T 3azo_A          479 WGVVDVEDCAAVATALAE-EGTADRARLAVRGGSAGGWTAASSLVS-T-DVYACGTVLYPVLDLLGWADG-------GT-  547 (662)
T ss_dssp             TTTHHHHHHHHHHHHHHH-TTSSCTTCEEEEEETHHHHHHHHHHHH-C-CCCSEEEEESCCCCHHHHHTT-------CS-
T ss_pred             cccccHHHHHHHHHHHHH-cCCcChhhEEEEEECHHHHHHHHHHhC-c-CceEEEEecCCccCHHHHhcc-------cc-
Confidence            777889999999999998 666899999999999999999998885 5 489999999998876432100       00 


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNN  718 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  718 (790)
                       ......|        ...+                                        .+.+  ......+...++..
T Consensus       548 -~~~~~~~--------~~~~----------------------------------------~~~~--~~~~~~~~~~sp~~  576 (662)
T 3azo_A          548 -HDFESRY--------LDFL----------------------------------------IGSF--EEFPERYRDRAPLT  576 (662)
T ss_dssp             -CGGGTTH--------HHHH----------------------------------------TCCT--TTCHHHHHHTCGGG
T ss_pred             -cchhhHh--------HHHH----------------------------------------hCCC--ccchhHHHhhChHh
Confidence             0000000        0000                                        0000  01223344455667


Q ss_pred             hhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          719 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       719 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      .++++ ++|+|++||++|.+||+.++.+++++|+..+++++++++|+++|.+..  ...++++.+.+||.++|+
T Consensus       577 ~~~~~-~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~  649 (662)
T 3azo_A          577 RADRV-RVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFG  649 (662)
T ss_dssp             GGGGC-CSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhccC-CCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhC
Confidence            88899 899999999999999999999999999999999999999999999875  678899999999999874

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=100.00  E-value=1.3e-44  Score=420.78  Aligned_cols=540  Identities=16%  Similarity=0.140  Sum_probs=364.7

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      .|+|||||++|+|.++..+.        .+.+|+++++++++      ..+++..... ..-..|.++++. ++|.+...
T Consensus       129 ~~~~SPDg~~la~~~~~~G~--------~~~~i~v~d~~tg~------~~~~~~~~~~-~~~~~wspDg~~-l~~~~~~~  192 (710)
T 2xdw_A          129 GYAFSEDGEYFAYGLSASGS--------DWVTIKFMKVDGAK------ELPDVLERVK-FSCMAWTHDGKG-MFYNAYPQ  192 (710)
T ss_dssp             EEEECTTSSEEEEEEEETTC--------SCEEEEEEETTTTE------EEEEEEEEEC-SCCEEECTTSSE-EEEEECCC
T ss_pred             EEEECCCCCEEEEEEcCCCC--------ceEEEEEEECCCCC------CCcccccCcc-cceEEEEeCCCE-EEEEEECC
Confidence            46899999999999875432        14489999999884      2222221111 123578887764 66655432


Q ss_pred             CCC---CC-CCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE-ecc
Q psy463          193 ESD---GS-TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV-NRV  267 (790)
Q Consensus       193 ~~~---~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~-~r~  267 (790)
                      ...   +. .-.....+||++++.+++...    ..+..            .  .........+.|||||+++++. .+.
T Consensus       193 ~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~----~~v~~------------~--~~~~~~~~~~~~SpDg~~l~~~~~~~  254 (710)
T 2xdw_A          193 QDGKSDGTETSTNLHQKLYYHVLGTDQSED----ILCAE------------F--PDEPKWMGGAELSDDGRYVLLSIREG  254 (710)
T ss_dssp             CSSCCSSSCCCCCCCCEEEEEETTSCGGGC----EEEEC------------C--TTCTTCEEEEEECTTSCEEEEEEECS
T ss_pred             ccccccccccccCCCCEEEEEECCCCcccc----eEEec------------c--CCCCeEEEEEEEcCCCCEEEEEEEcc
Confidence            100   00 000234679999998765211    11110            0  0224456789999999955444 444


Q ss_pred             Cc-ceEEEEEECCC------C--ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEc
Q psy463          268 QN-RARITRCSINE------G--TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL  338 (790)
Q Consensus       268 ~~-~~~i~~~~~~~------g--~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~  338 (790)
                      .+ ...|+++|+++      +  ..+.|+....       .....|+|||+.|+|...    .++.     ..+|+++|+
T Consensus       255 ~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~s~dg~~l~~~s~----~~~~-----~~~l~~~d~  318 (710)
T 2xdw_A          255 CDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-------GEYDYVTNEGTVFTFKTN----RHSP-----NYRLINIDF  318 (710)
T ss_dssp             SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-------SCEEEEEEETTEEEEEEC----TTCT-----TCEEEEEET
T ss_pred             CCCccEEEEEECcccccccCCccceEEeeCCCC-------cEEEEEeccCCEEEEEEC----CCCC-----CCEEEEEeC
Confidence            33 56799999987      5  3555553221       123569999999997654    2221     458999999


Q ss_pred             CCCCcccCCCcccccCCCe-EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecccccCCCcccEE
Q psy463          339 DDQAGIKDKVPVPLTRGRF-TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDLLTSANQKCSYS  416 (790)
Q Consensus       339 ~~~~~~~~~~~~~lt~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~  416 (790)
                      ++++..   ..+.|+.+.. .....+.|+++ +.+++......  ..+|+++++.+  ++ .+.|+.       ....+.
T Consensus       319 ~~~~~~---~~~~l~~~~~~~~~~~~~~~~~-~~lv~~~~~~g--~~~l~~~~~~~--g~~~~~l~~-------~~~~v~  383 (710)
T 2xdw_A          319 TDPEES---KWKVLVPEHEKDVLEWVACVRS-NFLVLCYLHDV--KNTLQLHDLAT--GALLKIFPL-------EVGSVV  383 (710)
T ss_dssp             TSCCGG---GCEEEECCCSSCEEEEEEEETT-TEEEEEEEETT--EEEEEEEETTT--CCEEEEECC-------CSSEEE
T ss_pred             CCCCcc---cceeccCCCCCCeEEEEEEEcC-CEEEEEEEECC--EEEEEEEECCC--CCEEEecCC-------CCceEE
Confidence            876400   0245554432 12233778854 55777665522  37899999854  33 344443       344667


Q ss_pred             EEEEecCCcEEEEEeecCC-CCeEEEEecCCCe--EEEeccchhHHHhhccC--CCCceEEEEEEcCCCcEEEEEEEeCC
Q psy463          417 GATFSTNVSYYVLSCIGPG-IPEIMLFDKTGQR--LLYWDTNEDLRTALTNI--TLPSVEYMSVPIQPNMEAQVKLFLPP  491 (790)
Q Consensus       417 ~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~--~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~dg~~i~~~~~~P~  491 (790)
                      .++++||++.+++++++.. |+.+|++|+.+++  .+.+...+     +.++  ....++.+.+++.||.+++++++.|.
T Consensus       384 ~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~  458 (710)
T 2xdw_A          384 GYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVT-----VKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK  458 (710)
T ss_dssp             EEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECC-----CTTCCGGGEEEEEEEEECTTSCEEEEEEEEET
T ss_pred             EEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecc-----cCCcCccccEEEEEEEEcCCCCEEEEEEEecC
Confidence            7889999999999988877 8899999998766  55554322     1111  12346788899999999999999999


Q ss_pred             CCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHH
Q psy463          492 GIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVT  571 (790)
Q Consensus       492 ~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~  571 (790)
                      ++.  ..++.|+||++||+++... ...|... ...+++.+||+|+++|+||++++|..|.......++...++|+.+++
T Consensus       459 ~~~--~~~~~P~vl~~hGg~~~~~-~~~~~~~-~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~  534 (710)
T 2xdw_A          459 GIK--LDGSHPAFLYGYGGFNISI-TPNYSVS-RLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAA  534 (710)
T ss_dssp             TCC--CSSCSCEEEECCCCTTCCC-CCCCCHH-HHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHH
T ss_pred             CCC--CCCCccEEEEEcCCCCCcC-CCcccHH-HHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHH
Confidence            865  5677899999999987642 2333322 22333327999999999999999998887766666667789999999


Q ss_pred             HHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccc
Q psy463          572 RYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAAL  651 (790)
Q Consensus       572 ~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  651 (790)
                      +++++ .+++|.+||+|+|+|+||++++.++.++|+ +|+++++.+|+.++..+.....            ...+.    
T Consensus       535 ~~l~~-~~~~~~~~i~i~G~S~GG~la~~~a~~~p~-~~~~~v~~~~~~d~~~~~~~~~------------~~~~~----  596 (710)
T 2xdw_A          535 EYLIK-EGYTSPKRLTINGGSNGGLLVATCANQRPD-LFGCVIAQVGVMDMLKFHKYTI------------GHAWT----  596 (710)
T ss_dssp             HHHHH-TTSCCGGGEEEEEETHHHHHHHHHHHHCGG-GCSEEEEESCCCCTTTGGGSTT------------GGGGH----
T ss_pred             HHHHH-cCCCCcceEEEEEECHHHHHHHHHHHhCcc-ceeEEEEcCCcccHhhccccCC------------ChhHH----
Confidence            99998 677899999999999999999999999885 9999999999988653211000            00000    


Q ss_pred             cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhh-----ccCCc
Q psy463          652 NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVD-----RIRDK  726 (790)
Q Consensus       652 ~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~  726 (790)
                          ...         |..+       ......                         .+...+++..+.     ++ ++
T Consensus       597 ----~~~---------g~~~-------~~~~~~-------------------------~~~~~sp~~~~~~~~~~~~-~~  630 (710)
T 2xdw_A          597 ----TDY---------GCSD-------SKQHFE-------------------------WLIKYSPLHNVKLPEADDI-QY  630 (710)
T ss_dssp             ----HHH---------CCTT-------SHHHHH-------------------------HHHHHCGGGCCCCCSSTTC-CC
T ss_pred             ----HhC---------CCCC-------CHHHHH-------------------------HHHHhCcHhhhcccccccC-CC
Confidence                000         0000       000111                         112223335566     67 65


Q ss_pred             -cEEEEecCCCcccchhhhHHHHHHHHhc-------CCceEEEEcCCCCCcCCC---cchHHHHHHHHHHHHhhC
Q psy463          727 -QYLLVHGTMDDNVHFQQSMMLAKSLQHA-------DIMFQSQTYPDEEHGLIG---VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       727 -P~Lii~G~~D~~v~~~~~~~l~~~l~~~-------g~~~~~~~~p~~~H~~~~---~~~~~~~~i~~fl~~~l~  790 (790)
                       |+||+||++|.+||+.++..++++|++.       +.+++++++++++|++..   ...+.+..+.+||.++|+
T Consensus       631 pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~  705 (710)
T 2xdw_A          631 PSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN  705 (710)
T ss_dssp             CEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence             9999999999999999999999999998       889999999999999876   346788999999999874

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=100.00  E-value=1.3e-44  Score=419.22  Aligned_cols=591  Identities=12%  Similarity=0.091  Sum_probs=394.6

Q ss_pred             ecCCceeEeCCCCCceEEEEecCC--ceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeE
Q psy463            7 LSSSSALWFSPSGNNLAYASFDDN--RTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRAR   84 (790)
Q Consensus         7 ~~~~~~~~wSPDG~~iaf~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~   84 (790)
                      +..+.....+|||++|+|++.+.+  ...+|.++..|++         ...+++...    .+.++.             
T Consensus        67 ~~~~~~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~---------~~~l~d~~~----~a~~~~-------------  120 (695)
T 2bkl_A           67 FYTDSVSTPSRRNGRFFYVRTHKDKEKAILYWRQGESGQ---------EKVLLDPNG----WSKDGT-------------  120 (695)
T ss_dssp             HSCCEECCCEEETTEEEEEEECTTCSSCEEEEEESTTSC---------CEEEECGGG----SSSSSC-------------
T ss_pred             hccccCCCCEEECCEEEEEEEcCCCeEEEEEEEcCCCCC---------cEEEEchHH----hccCCC-------------
Confidence            334555667799999999998776  4678999887763         222211111    000000             


Q ss_pred             EEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCc-cee
Q psy463           85 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV-PVP  163 (790)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~-~~~  163 (790)
                                            +  ....++|||||++|+|..+..+..        +..|+++++++++.    + ...
T Consensus       121 ----------------------~--~~~~~~~SPDG~~la~~~~~~G~~--------~~~i~v~dl~tg~~----~~~~~  164 (695)
T 2bkl_A          121 ----------------------V--SLGTWAVSWDGKKVAFAQKPNAAD--------EAVLHVIDVDSGEW----SKVDV  164 (695)
T ss_dssp             ----------------------E--EEEEEEECTTSSEEEEEEEETTCS--------CCEEEEEETTTCCB----CSSCC
T ss_pred             ----------------------E--EEEEEEECCCCCEEEEEECCCCCc--------eEEEEEEECCCCCC----cCCcc
Confidence                                  0  013468999999999998754421        34899999998852    1 112


Q ss_pred             ccccceEEEEEEeeeccCCccEEEEecccCCCCC-CCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCC
Q psy463          164 LTRGRFTVTEILAWDERENNPLLILSHNQESDGS-TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE  242 (790)
Q Consensus       164 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~  242 (790)
                      ++....   .-..|.++++. ++|.+......+. .-.....+||++++.+++...    ..+..              .
T Consensus       165 ~~~~~~---~~~~wspDg~~-l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~----~lv~~--------------~  222 (695)
T 2bkl_A          165 IEGGKY---ATPKWTPDSKG-FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD----TVVHE--------------R  222 (695)
T ss_dssp             BSCCTT---CCCEECTTSSE-EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC----EEEEC--------------C
T ss_pred             cCcccc---cceEEecCCCE-EEEEEecCCCCCccccCCCCCEEEEEECCCCchhc----eEEEe--------------c
Confidence            322211   23578887763 6666543211110 001245689999998875311    11110              0


Q ss_pred             CCCCCEEEEEEEccCCcEEEEEeccC-cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          243 NNVEPVLSRVNWANESVVAAWVNRVQ-NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       243 ~~~~~~~~~~~wspDg~~~~~~~r~~-~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                      +........+.|||||+++++..... ....|++++..+++.+.|+.....      ...+.| +||+ |++...    .
T Consensus       223 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~------~~~~~~-~~g~-l~~~s~----~  290 (695)
T 2bkl_A          223 TGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA------KYEVHA-WKDR-FYVLTD----E  290 (695)
T ss_dssp             CCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC------CEEEEE-ETTE-EEEEEC----T
T ss_pred             CCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc------eEEEEe-cCCc-EEEEEC----C
Confidence            02234677899999999554443333 456799998878888877764321      224555 8888 775543    2


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCc---ccccCC--CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCC
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVP---VPLTRG--RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTA  396 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~---~~lt~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~  396 (790)
                      +..     ...|+++|+++++      .   +.|+..  ...+.. ++|+  ++.+++....+.  ..+|+.+++.+  +
T Consensus       291 ~~~-----~~~l~~~d~~~~~------~~~~~~l~~~~~~~~l~~-~~~~--~~~lv~~~~~dg--~~~l~~~~~~g--~  352 (695)
T 2bkl_A          291 GAP-----RQRVFEVDPAKPA------RASWKEIVPEDSSASLLS-VSIV--GGHLSLEYLKDA--TSEVRVATLKG--K  352 (695)
T ss_dssp             TCT-----TCEEEEEBTTBCS------GGGCEEEECCCSSCEEEE-EEEE--TTEEEEEEEETT--EEEEEEEETTC--C
T ss_pred             CCC-----CCEEEEEeCCCCC------ccCCeEEecCCCCCeEEE-EEEE--CCEEEEEEEECC--EEEEEEEeCCC--C
Confidence            221     4589999997765      3   445543  233333 6676  456777665522  37899999865  3


Q ss_pred             CcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEE
Q psy463          397 TPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSV  475 (790)
Q Consensus       397 ~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  475 (790)
                      ..+.+...      +...+..+++|||++.+++++++.. |+.||++|+++++.+.+...+..   +. .....++.+.+
T Consensus       353 ~~~~l~~~------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~---~~-~~~~~~~~~~~  422 (695)
T 2bkl_A          353 PVRTVQLP------GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP---MN-PEQYQVEQVFY  422 (695)
T ss_dssp             EEEECCCS------SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS---SC-GGGEEEEEEEE
T ss_pred             eeEEecCC------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCC---CC-HHHCeEEEEEE
Confidence            34444321      2345556788999999999998887 88999999988776665433210   11 11235678889


Q ss_pred             EcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhh
Q psy463          476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG  555 (790)
Q Consensus       476 ~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~  555 (790)
                      ++.||.+++++++.|.++.  ..++.|+||++||+++... ...|.... ..++ ++||+|+++|+||++++|..|....
T Consensus       423 ~~~dg~~i~~~~~~p~~~~--~~~~~p~vl~~hGg~~~~~-~~~~~~~~-~~l~-~~G~~v~~~d~rG~g~~g~~~~~~~  497 (695)
T 2bkl_A          423 ASKDGTKVPMFVVHRKDLK--RDGNAPTLLYGYGGFNVNM-EANFRSSI-LPWL-DAGGVYAVANLRGGGEYGKAWHDAG  497 (695)
T ss_dssp             ECTTSCEEEEEEEEETTCC--CSSCCCEEEECCCCTTCCC-CCCCCGGG-HHHH-HTTCEEEEECCTTSSTTCHHHHHTT
T ss_pred             ECCCCCEEEEEEEECCCCC--CCCCccEEEEECCCCcccc-CCCcCHHH-HHHH-hCCCEEEEEecCCCCCcCHHHHHhh
Confidence            9999999999999999765  5678899999999987643 33444332 2344 4899999999999999999888776


Q ss_pred             hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcC
Q psy463          556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMG  635 (790)
Q Consensus       556 ~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g  635 (790)
                      ...++...++|+.++++++++ .+++|..||+|+|+||||++++.++.++|+ +|+++++.+|+.++..+.....     
T Consensus       498 ~~~~~~~~~~D~~~~~~~l~~-~~~~~~~~i~i~G~S~GG~la~~~~~~~p~-~~~~~v~~~~~~d~~~~~~~~~-----  570 (695)
T 2bkl_A          498 RLDKKQNVFDDFHAAAEYLVQ-QKYTQPKRLAIYGGSNGGLLVGAAMTQRPE-LYGAVVCAVPLLDMVRYHLFGS-----  570 (695)
T ss_dssp             SGGGTHHHHHHHHHHHHHHHH-TTSCCGGGEEEEEETHHHHHHHHHHHHCGG-GCSEEEEESCCCCTTTGGGSTT-----
T ss_pred             HhhcCCCcHHHHHHHHHHHHH-cCCCCcccEEEEEECHHHHHHHHHHHhCCc-ceEEEEEcCCccchhhccccCC-----
Confidence            666666778999999999998 677899999999999999999999998885 9999999999988754311000     


Q ss_pred             CCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhh
Q psy463          636 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAA  715 (790)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  715 (790)
                             ...+        ...+         |..+      . ...++                         .+...+
T Consensus       571 -------~~~~--------~~~~---------g~~~------~-~~~~~-------------------------~~~~~s  594 (695)
T 2bkl_A          571 -------GRTW--------IPEY---------GTAE------K-PEDFK-------------------------TLHAYS  594 (695)
T ss_dssp             -------GGGG--------HHHH---------CCTT------S-HHHHH-------------------------HHHHHC
T ss_pred             -------Ccch--------HHHh---------CCCC------C-HHHHH-------------------------HHHhcC
Confidence                   0000        0000         0000      0 01111                         112233


Q ss_pred             hhhhhhccCC--ccEEEEecCCCcccchhhhHHHHHHHHh---cCCceEEEEcCCCCCcCCC---cchHHHHHHHHHHHH
Q psy463          716 LNNKVDRIRD--KQYLLVHGTMDDNVHFQQSMMLAKSLQH---ADIMFQSQTYPDEEHGLIG---VRPHFYHTLERFLDS  787 (790)
Q Consensus       716 ~~~~~~~i~~--~P~Lii~G~~D~~v~~~~~~~l~~~l~~---~g~~~~~~~~p~~~H~~~~---~~~~~~~~i~~fl~~  787 (790)
                      ++..++++ +  +|+||+||++|.+||+.++..++++|++   .+.+++++++|++||++..   ...+.+..+.+||.+
T Consensus       595 p~~~~~~~-~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~  673 (695)
T 2bkl_A          595 PYHHVRPD-VRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQ  673 (695)
T ss_dssp             GGGCCCSS-CCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHH
T ss_pred             hHhhhhhc-CCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence            44556665 4  7999999999999999999999999998   6789999999999999854   466788999999998


Q ss_pred             hhC
Q psy463          788 CFA  790 (790)
Q Consensus       788 ~l~  790 (790)
                      +|+
T Consensus       674 ~l~  676 (695)
T 2bkl_A          674 VLD  676 (695)
T ss_dssp             HTT
T ss_pred             HcC
Confidence            874

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=100.00  E-value=8.1e-44  Score=411.26  Aligned_cols=435  Identities=15%  Similarity=0.114  Sum_probs=311.0

Q ss_pred             EEEEEEEccCCcEEEE-EeccCcceEEEEEECCCC--ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          248 VLSRVNWANESVVAAW-VNRVQNRARITRCSINEG--TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~-~~r~~~~~~i~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ....+.|||||+++++ ..+.....+||+++++++  +.+.|+....       .....|++||++|+|+..    .++.
T Consensus       235 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~-------~~~~~~~~~g~~l~~~t~----~~~~  303 (693)
T 3iuj_A          235 RYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD-------ADVSLVDNKGSTLYLLTN----RDAP  303 (693)
T ss_dssp             SEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-------SCEEEEEEETTEEEEEEC----TTCT
T ss_pred             EEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-------ceEEEEeccCCEEEEEEC----CCCC
Confidence            3567899999995544 444444468999999876  4555554321       111238999999997665    3331


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCc---ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVP---VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~---~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                           ...|+++++++++      .   +.|+.+...+.   .|+++++.|++....+.  ..+|+++++++  +..+.|
T Consensus       304 -----~~~l~~~d~~~~~------~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~~~g--~~~l~~~d~~g--~~~~~l  365 (693)
T 3iuj_A          304 -----NRRLVTVDAANPG------PAHWRDLIPERQQVL---TVHSGSGYLFAEYMVDA--TARVEQFDYEG--KRVREV  365 (693)
T ss_dssp             -----TCEEEEEETTSCC------GGGCEEEECCCSSCE---EEEEETTEEEEEEEETT--EEEEEEECTTS--CEEEEE
T ss_pred             -----CCEEEEEeCCCCC------ccccEEEecCCCCEE---EEEEECCEEEEEEEECC--eeEEEEEECCC--CeeEEe
Confidence                 4589999998765      4   45555443332   78999999999887632  37899999886  555555


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEcCCC
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPN  480 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg  480 (790)
                      +..      +...+..+++++|++.+++.+++.. |+.++.+|+++++.+.+...+.   .+.. ....++.+.+++.||
T Consensus       366 ~~p------~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~---~~~~-~~~~~~~~~~~~~dg  435 (693)
T 3iuj_A          366 ALP------GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAA---PFKP-EDYVSEQRFYQSKDG  435 (693)
T ss_dssp             CCS------SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCS---SCCG-GGEEEEEEEEECTTS
T ss_pred             ecC------CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCC---CcCh-hhCeeEEEEEecCCC
Confidence            431      3345666778899999999988876 8999999998877666654321   1111 112467889999999


Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG  560 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~  560 (790)
                      .+++++++.|.+..  ..++.|+||++||+++... ...|..  ....++++||+|+++|+||++++|..|........+
T Consensus       436 ~~i~~~l~~p~~~~--~~~~~P~ll~~hGg~~~~~-~~~~~~--~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~  510 (693)
T 3iuj_A          436 TRVPLIISYRKGLK--LDGSNPTILYGYGGFDVSL-TPSFSV--SVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNK  510 (693)
T ss_dssp             CEEEEEEEEESSCC--CSSCCCEEEECCCCTTCCC-CCCCCH--HHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGT
T ss_pred             cEEEEEEEecCCCC--CCCCccEEEEECCCCCcCC-CCccCH--HHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcC
Confidence            99999999999765  5678899999999987632 333332  223444489999999999999999999888777777


Q ss_pred             ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCcc
Q psy463          561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFE  640 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~  640 (790)
                      ...++|+.+++++|++ .+.+|.+||+|+|+|+||++++.++.++|+ +|+++++.+|+.++..+.......        
T Consensus       511 ~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~S~GG~la~~~~~~~p~-~~~a~v~~~~~~d~~~~~~~~~~~--------  580 (693)
T 3iuj_A          511 QNVFDDFIAAAEYLKA-EGYTRTDRLAIRGGSNGGLLVGAVMTQRPD-LMRVALPAVGVLDMLRYHTFTAGT--------  580 (693)
T ss_dssp             HHHHHHHHHHHHHHHH-TTSCCGGGEEEEEETHHHHHHHHHHHHCTT-SCSEEEEESCCCCTTTGGGSGGGG--------
T ss_pred             CCcHHHHHHHHHHHHH-cCCCCcceEEEEEECHHHHHHHHHHhhCcc-ceeEEEecCCcchhhhhccCCCch--------
Confidence            7789999999999998 688999999999999999999999999885 999999999998875432100000        


Q ss_pred             CchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc-chhhhhhhhhhh
Q psy463          641 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN-LEGYKIAALNNK  719 (790)
Q Consensus       641 ~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  719 (790)
                          .+        ...+                                         +.+.-... ...+...++...
T Consensus       581 ----~~--------~~~~-----------------------------------------g~p~~~~~~~~~~~~~sp~~~  607 (693)
T 3iuj_A          581 ----GW--------AYDY-----------------------------------------GTSADSEAMFDYLKGYSPLHN  607 (693)
T ss_dssp             ----GC--------HHHH-----------------------------------------CCTTSCHHHHHHHHHHCHHHH
T ss_pred             ----hH--------HHHc-----------------------------------------CCccCHHHHHHHHHhcCHHHh
Confidence                00        0000                                         00000000 112233445577


Q ss_pred             hhc-cCCcc-EEEEecCCCcccchhhhHHHHHHHHhc---CCceEEEEcCCCCCcCCC---cchHHHHHHHHHHHHhhC
Q psy463          720 VDR-IRDKQ-YLLVHGTMDDNVHFQQSMMLAKSLQHA---DIMFQSQTYPDEEHGLIG---VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       720 ~~~-i~~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~~---g~~~~~~~~p~~~H~~~~---~~~~~~~~i~~fl~~~l~  790 (790)
                      +++ + ++| +||+||++|.+||+.++..++++|+++   +++++++++++++|++..   ...+.+..+.+||.++|+
T Consensus       608 ~~~~~-~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~  685 (693)
T 3iuj_A          608 VRPGV-SYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMG  685 (693)
T ss_dssp             CCTTC-CCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hcccC-CCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcC
Confidence            777 7 776 999999999999999999999999998   479999999999999875   456788899999999874

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=100.00  E-value=1.6e-43  Score=413.07  Aligned_cols=589  Identities=15%  Similarity=0.144  Sum_probs=381.1

Q ss_pred             ecCCceeEeCCCCCceEEEEecCC--ceeEEEeccc---CCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccc
Q psy463            7 LSSSSALWFSPSGNNLAYASFDDN--RTVIMTIPFY---GNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQN   81 (790)
Q Consensus         7 ~~~~~~~~wSPDG~~iaf~~~~~~--~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~   81 (790)
                      +..+.....+|||++++|++.+.+  ...+|.++..   |++         ...+.+...    .+.++.          
T Consensus       106 ~~~~~~~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~lld~~~----l~~~~~----------  162 (741)
T 1yr2_A          106 IDYERFGLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTK---------GRVLLDPNT----WAKDGA----------  162 (741)
T ss_dssp             SCCCEECCCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCC---------CEEEECGGG----CC--------------
T ss_pred             hcccccCCCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCC---------CEEEECHHH----hccCCC----------
Confidence            334555667799999999998776  4678999876   543         111111100    000000          


Q ss_pred             eeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcc
Q psy463           82 RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  161 (790)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~  161 (790)
                                               +  ....++|||||++|+|.++..+..        +.+||++|+++++      .
T Consensus       163 -------------------------~--~~~~~~~SPDG~~la~~~~~~G~e--------~~~i~v~dl~tg~------~  201 (741)
T 1yr2_A          163 -------------------------T--ALDAWAASDDGRLLAYSVQDGGSD--------WRTVKFVGVADGK------P  201 (741)
T ss_dssp             -------------------------E--EEEEEEECTTSSEEEEEEEETTCS--------EEEEEEEETTTCC------E
T ss_pred             -------------------------E--EEEeEEECCCCCEEEEEEcCCCCc--------eEEEEEEECCCCC------C
Confidence                                     0  012468999999999998654321        3489999999885      1


Q ss_pred             eeccccceEEE-EEEeeeccCCccEEEEecccCCCCCCC--ccccceeEEEecCCcccccCcCCccccccccceeehhhc
Q psy463          162 VPLTRGRFTVT-EILAWDERENNPLLILSHNQESDGSTP--VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW  238 (790)
Q Consensus       162 ~~lt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~  238 (790)
                      .+.+.  ..+. .-..|.++ + .++|.+......+...  .....+||+.++.+++...    ..+.            
T Consensus       202 ~~~~~--~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~----~lv~------------  261 (741)
T 1yr2_A          202 LADEL--KWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD----QPVF------------  261 (741)
T ss_dssp             EEEEE--EEEESCCCEESTT-S-EEEEEECCCC--------CCCCCEEEEEETTSCGGGC----EEEE------------
T ss_pred             CCccC--CCceeccEEEECC-C-EEEEEEecCcccccccccCCCCCEEEEEECCCCchhC----EEEe------------
Confidence            11111  1111 23578887 4 3666654221100000  0234689999998765211    1111            


Q ss_pred             ccCCCCCCCEEEEEEEccCCcEEEEEe-ccC-cceEEEEEECCCC--c-eeEEEEEeCCCcccccCCceeEccCCCEEEE
Q psy463          239 DEKENNVEPVLSRVNWANESVVAAWVN-RVQ-NRARITRCSINEG--T-CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLL  313 (790)
Q Consensus       239 ~~~~~~~~~~~~~~~wspDg~~~~~~~-r~~-~~~~i~~~~~~~g--~-~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~  313 (790)
                      ..  +........+.|||||+++++.. +.. ....|+++|++++  + .+.|..... .     . ...++|||+.|+|
T Consensus       262 ~~--~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~-----~-~~~~~~dg~~l~~  332 (741)
T 1yr2_A          262 AT--PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK-A-----Q-WDFVDGVGDQLWF  332 (741)
T ss_dssp             CC--TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-S-----C-EEEEEEETTEEEE
T ss_pred             cc--CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-c-----e-EEEEeccCCEEEE
Confidence            00  02223577899999999555443 331 3567999999887  5 566654321 0     1 2235699999997


Q ss_pred             EEccccccCCCCCcCcccEEEEEEcCCC--CcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463          314 ILSHNQESDGSTPVDSWDHLTFIDLDDQ--AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~--~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                      ...    .++.     ..+|+++|++++  +      .+.|+.+...+...+.|+  ++.+++......  ..+|+.+++
T Consensus       333 ~s~----~~~~-----~~~l~~~d~~~~~~~------~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg--~~~l~~~~~  393 (741)
T 1yr2_A          333 VSG----DGAP-----LKKIVRVDLSGSTPR------FDTVVPESKDNLESVGIA--GNRLFASYIHDA--KSQVLAFDL  393 (741)
T ss_dssp             EEC----TTCT-----TCEEEEEECSSSSCE------EEEEECCCSSEEEEEEEE--BTEEEEEEEETT--EEEEEEEET
T ss_pred             EEC----CCCC-----CCEEEEEeCCCCccc------cEEEecCCCCeEEEEEEE--CCEEEEEEEECC--EEEEEEEeC
Confidence            654    2221     458999999873  3      455554433233225565  556777766522  378999998


Q ss_pred             CCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCCce
Q psy463          392 ADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSV  470 (790)
Q Consensus       392 ~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  470 (790)
                      ++  +..+.|+..      +...+..++++||++.+++++++.. |+.||++|+.+++.+.+...+ .  .+ +......
T Consensus       394 ~g--~~~~~l~~~------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~-~--~~-~~~~~~~  461 (741)
T 1yr2_A          394 DG--KPAGAVSLP------GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVH-L--TF-DPADFRV  461 (741)
T ss_dssp             TS--CEEEECBCS------SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCC-C--SS-CGGGEEE
T ss_pred             CC--CceeeccCC------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCC-C--CC-ChhHCEE
Confidence            65  444445421      2446677889999999999988877 889999999988776664321 0  01 1112356


Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +.+.+++.||.+++++++.|.+.    .++.|+||++||+++... ...|.  .....++++||+|+++|+||++++|..
T Consensus       462 ~~~~~~~~dg~~i~~~~~~p~~~----~~~~p~vl~~hGg~~~~~-~~~~~--~~~~~l~~~G~~v~~~d~rG~g~~g~~  534 (741)
T 1yr2_A          462 EQVFYPSKDGTKVPMFIVRRKDA----KGPLPTLLYGYGGFNVAL-TPWFS--AGFMTWIDSGGAFALANLRGGGEYGDA  534 (741)
T ss_dssp             EEEEEECTTSCEEEEEEEEETTC----CSCCCEEEECCCCTTCCC-CCCCC--HHHHHHHTTTCEEEEECCTTSSTTHHH
T ss_pred             EEEEEEcCCCCEEEEEEEecCCC----CCCCcEEEEECCCCCccC-CCCcC--HHHHHHHHCCcEEEEEecCCCCCCCHH
Confidence            78889999999999999999752    356899999999987642 22333  223345558999999999999999998


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS  630 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~  630 (790)
                      |.......++...++|+.++++++++ .+.+|.+||+|+|+|+||++++.++.++|+ +|+++++.+|+.++..+.....
T Consensus       535 ~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~~~~ri~i~G~S~GG~la~~~~~~~p~-~~~~~v~~~~~~d~~~~~~~~~  612 (741)
T 1yr2_A          535 WHDAGRRDKKQNVFDDFIAAGEWLIA-NGVTPRHGLAIEGGSNGGLLIGAVTNQRPD-LFAAASPAVGVMDMLRFDQFTA  612 (741)
T ss_dssp             HHHTTSGGGTHHHHHHHHHHHHHHHH-TTSSCTTCEEEEEETHHHHHHHHHHHHCGG-GCSEEEEESCCCCTTSGGGSTT
T ss_pred             HHHhhhhhcCCCcHHHHHHHHHHHHH-cCCCChHHEEEEEECHHHHHHHHHHHhCch-hheEEEecCCccccccccCCCC
Confidence            88776666666779999999999998 677899999999999999999999998885 9999999999988754211000


Q ss_pred             hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463          631 ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG  710 (790)
Q Consensus       631 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  710 (790)
                                  ...+        ....         |..+       .....+.+                        
T Consensus       613 ------------~~~~--------~~~~---------g~~~-------~~~~~~~~------------------------  632 (741)
T 1yr2_A          613 ------------GRYW--------VDDY---------GYPE-------KEADWRVL------------------------  632 (741)
T ss_dssp             ------------GGGG--------HHHH---------CCTT-------SHHHHHHH------------------------
T ss_pred             ------------Cchh--------HHHc---------CCCC-------CHHHHHHH------------------------
Confidence                        0000        0000         0000       00111111                        


Q ss_pred             hhhhhhhhhhhc-cCC-ccEEEEecCCCcccchhhhHHHHHHHHh---cCCceEEEEcCCCCCcCCC---cchHHHHHHH
Q psy463          711 YKIAALNNKVDR-IRD-KQYLLVHGTMDDNVHFQQSMMLAKSLQH---ADIMFQSQTYPDEEHGLIG---VRPHFYHTLE  782 (790)
Q Consensus       711 ~~~~~~~~~~~~-i~~-~P~Lii~G~~D~~v~~~~~~~l~~~l~~---~g~~~~~~~~p~~~H~~~~---~~~~~~~~i~  782 (790)
                       ...++...++. + + .|+|++||++|.+||+.++..++++|++   .|.++++++++++||++..   ...+++..+.
T Consensus       633 -~~~sp~~~~~~~~-~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~  710 (741)
T 1yr2_A          633 -RRYSPYHNVRSGV-DYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQ  710 (741)
T ss_dssp             -HTTCGGGCCCTTS-CCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHH
T ss_pred             -HHcCchhhhhccC-CCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHH
Confidence             22233355665 7 6 4999999999999999999999999999   8889999999999999875   3457889999


Q ss_pred             HHHHHhhC
Q psy463          783 RFLDSCFA  790 (790)
Q Consensus       783 ~fl~~~l~  790 (790)
                      +||.++|+
T Consensus       711 ~fl~~~l~  718 (741)
T 1yr2_A          711 AFLAHFTG  718 (741)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHcC
Confidence            99998874

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=100.00  E-value=2e-42  Score=401.47  Aligned_cols=439  Identities=11%  Similarity=0.066  Sum_probs=304.0

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCC--ce--eEEEEEeCCCcccccCCceeEccC---CCEEEEEEccccc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEG--TC--DVVFSRDLDRGWFEPFDHLRFSSD---GKKMLLILSHNQE  320 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g--~~--~~l~~~~~~~~~~~~~~~~~~spD---g~~i~~~~~~~~~  320 (790)
                      +...+.|||||+++++........+|+++|++++  +.  +.++..         ...+.|+||   |+.|+|...    
T Consensus       272 ~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~---------~~~~~~s~~~~~g~~l~~~t~----  338 (751)
T 2xe4_A          272 FSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR---------EKGVRYDVQMHGTSHLVILTN----  338 (751)
T ss_dssp             CEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC---------CTTCCEEEEEETTTEEEEEEC----
T ss_pred             eEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC---------CCCceEEEeeeeCCEEEEEeC----
Confidence            3457899999996666555455678999999886  34  444322         225667777   999987665    


Q ss_pred             cC--CCCCcCcccEEEEEEcCC-CCcccCCCccc-ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc-----
Q psy463          321 SD--GSTPVDSWDHLTFIDLDD-QAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI-----  391 (790)
Q Consensus       321 ~~--g~~~~~~~~~l~~~d~~~-~~~~~~~~~~~-lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~-----  391 (790)
                      .+  +      +.+|+++++++ ++      .+. |......+. ...++++++.|+|......  ..+|+++++     
T Consensus       339 ~~~a~------~~~L~~~d~~~~~~------~~~~li~~~~~~~-l~~~~~~~~~lv~~~~~~g--~~~l~~~dl~~~~~  403 (751)
T 2xe4_A          339 EGGAV------NHKLLIAPRGQPSD------WSHVLVDHSEDVF-MESIAVRSNYLVVAGRRAG--LTRIWTMMADSQDG  403 (751)
T ss_dssp             TTTCT------TCEEEEEETTSTTC------CCCEEECCCSSEE-EEEEEECSSEEEEEEEETT--EEEEEEEECCTTTS
T ss_pred             CCCCC------CcEEEEEcCCCccc------ceeeEECCCCCcE-EEEEEEECCEEEEEEEeCC--EEEEEEEecccccc
Confidence            33  3      66899999875 33      444 443333222 1345566788998887732  378999996     


Q ss_pred             --CCCCCC-cceeeecccccCCCcccEEEEEE----ecCCcEEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhc
Q psy463          392 --ADPTAT-PECITCDLLTSANQKCSYSGATF----STNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALT  463 (790)
Q Consensus       392 --~~~~~~-~~~lt~~~~~~~~~~~~~~~~~~----s~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~  463 (790)
                        ++  ++ .+.|+..      .......+.+    +++++.+++++++.. |+.+|.+++.+++.+.+...+.. ..+.
T Consensus       404 ~~~~--g~~~~~l~l~------~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~-~~~~  474 (751)
T 2xe4_A          404 VFKA--GTGLREVVME------EPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVG-GGFD  474 (751)
T ss_dssp             CCCT--TTCCEECCCC------CSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCC-TTCC
T ss_pred             cccC--CccceEECCC------CceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccc-cCCC
Confidence              44  44 5555421      1222223322    568888989988888 89999999988766666532210 0011


Q ss_pred             cCCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCC
Q psy463          464 NITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRN  543 (790)
Q Consensus       464 ~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG  543 (790)
                      ...+ .++.+.+++.||.+++++++.|.+..  ..+++|+||++||+++... ...|...  ...++++||+|+++|+||
T Consensus       475 ~~~~-~~~~~~~~s~dG~~i~~~l~~p~~~~--~~~~~P~vl~~HGg~~~~~-~~~~~~~--~~~l~~~G~~v~~~d~RG  548 (751)
T 2xe4_A          475 AANY-KVERRFATAPDQTKIPLSVVYHKDLD--MSQPQPCMLYGYGSYGLSM-DPQFSIQ--HLPYCDRGMIFAIAHIRG  548 (751)
T ss_dssp             GGGE-EEEEEEEECTTCCEEEEEEEEETTSC--TTSCCCEEEECCCCTTCCC-CCCCCGG--GHHHHTTTCEEEEECCTT
T ss_pred             ccce-EEEEEEEECCCCcEEEEEEEcCCCCC--CCCCccEEEEECCCCCcCC-CCcchHH--HHHHHhCCcEEEEEeeCC
Confidence            1111 36888999999999999999998765  5677899999999987643 3344432  234455899999999999


Q ss_pred             CCCChhhhHh-hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463          544 SALKGNTLKY-AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW  622 (790)
Q Consensus       544 ~~~~g~~~~~-~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~  622 (790)
                      ++++|..|.. .....++...++|+.++++++++ .+.+|.+||+|+|+|+||++++.++.++|+ +|+++|+.+|+.++
T Consensus       549 ~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~S~GG~la~~~a~~~p~-~~~a~v~~~~~~d~  626 (751)
T 2xe4_A          549 GSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVN-AKLTTPSQLACEGRSAGGLLMGAVLNMRPD-LFKVALAGVPFVDV  626 (751)
T ss_dssp             SCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHH-TTSCCGGGEEEEEETHHHHHHHHHHHHCGG-GCSEEEEESCCCCH
T ss_pred             CCCcCcchhhccccccccCccHHHHHHHHHHHHH-CCCCCcccEEEEEECHHHHHHHHHHHhCch-heeEEEEeCCcchH
Confidence            9999999887 66666677789999999999998 677899999999999999999999998885 99999999999886


Q ss_pred             ccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          623 IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       623 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                      ..+.        ...........|..         .         |  +   +  .....+.                  
T Consensus       627 ~~~~--------~~~~~~~~~~~~~~---------~---------g--~---p--~~~~~~~------------------  655 (751)
T 2xe4_A          627 MTTM--------CDPSIPLTTGEWEE---------W---------G--N---P--NEYKYYD------------------  655 (751)
T ss_dssp             HHHH--------TCTTSTTHHHHTTT---------T---------C--C---T--TSHHHHH------------------
T ss_pred             Hhhh--------cccCcccchhhHHH---------c---------C--C---C--CCHHHHH------------------
Confidence            4320        00000000000000         0         0  0   0  0001111                  


Q ss_pred             CcCCcchhhhhhhhhhhhhccCCcc-EEEEecCCCcccchhhhHHHHHHHHhcCC---ceEEEEcCCCCCcCCC---cch
Q psy463          703 TFEDNLEGYKIAALNNKVDRIRDKQ-YLLVHGTMDDNVHFQQSMMLAKSLQHADI---MFQSQTYPDEEHGLIG---VRP  775 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~i~~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~~g~---~~~~~~~p~~~H~~~~---~~~  775 (790)
                             .+...+++..++++ ++| +||+||++|.+||+.++.+++++|+.+++   .+.+.++++++|++..   ...
T Consensus       656 -------~~~~~sp~~~~~~~-~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~  727 (751)
T 2xe4_A          656 -------YMLSYSPMDNVRAQ-EYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFW  727 (751)
T ss_dssp             -------HHHHHCTGGGCCSS-CCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHH
T ss_pred             -------HHHhcChhhhhccC-CCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHH
Confidence                   12233455777788 886 99999999999999999999999999854   4556667999999875   334


Q ss_pred             HHHHHHHHHHHHhhC
Q psy463          776 HFYHTLERFLDSCFA  790 (790)
Q Consensus       776 ~~~~~i~~fl~~~l~  790 (790)
                      +.+..+.+||.++|+
T Consensus       728 ~~~~~~~~Fl~~~l~  742 (751)
T 2xe4_A          728 KESAIQQAFVCKHLK  742 (751)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhC
Confidence            566789999999874

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=100.00  E-value=3.8e-35  Score=331.11  Aligned_cols=550  Identities=14%  Similarity=0.092  Sum_probs=347.9

Q ss_pred             cccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecccc-c--eEEEEEEeeeccCCccEEEEeccc
Q psy463          116 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-R--FTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       116 ~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~-~--~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ++|||+++++..+.++..        +..+..+|+.+++...+... .-.++ .  +.=..+.+|-. .+ .++|.+.- 
T Consensus       137 ~~~~~~~~~~~ls~~G~d--------~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d-~~-~~~~~~~~-  204 (711)
T 4hvt_A          137 CFQNPNRYLISMSFGGKD--------EMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWIN-KD-TIIFNLVL-  204 (711)
T ss_dssp             CSSSTTEEEEEEEETTCS--------EEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEE-TT-EEEECCCC-
T ss_pred             cCCCCCEEEEEeCCCCCc--------eeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEEC-CC-EEEEEeCC-
Confidence            899999999987765533        66889999988752111111 00000 0  00012335642 22 14443321 


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcE----EEEEec-c
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVV----AAWVNR-V  267 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~----~~~~~r-~  267 (790)
                      .....+-..+...+|+..+.+....    ...+-            ..   ........+.-++|++.    ++.... +
T Consensus       205 ~~~~~~~~~~~~~v~~~~~Gt~~~~----~~~v~------------~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  265 (711)
T 4hvt_A          205 HKNEITSSLYPNSLYIWKRGESIEK----AKKLF------------EV---PKEYIYVSAGKLLSDTISSSLIFISANKD  265 (711)
T ss_dssp             STTCBCTTSSBCEEEEEETTSCGGG----CEEEE------------EC---CTTSCEEEEEESSCTTTCSSEEEEEEESS
T ss_pred             CCCCcCcCCCCCEEEEEECCCChHH----CeEEe------------cc---CCCceEEEEEEecCCCceEEEEEEEEecc
Confidence            1111111123467777776654321    11111            11   11222345677888882    333322 2


Q ss_pred             CcceEEEEEECCC--CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcc-
Q psy463          268 QNRARITRCSINE--GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI-  344 (790)
Q Consensus       268 ~~~~~i~~~~~~~--g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~-  344 (790)
                      .....+|+++++.  ++...|....        ...+.++.+|+.++ ....+-...|..  .....|+.+++++.... 
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~  334 (711)
T 4hvt_A          266 FYNYDNYILDTKYKNLKLQKINMPS--------DATLQGSFKEYVFW-LLRSDWKFKSHN--IKAGSLVALHFTDLLKTE  334 (711)
T ss_dssp             SSCEEEEEEECSSSSCEEEECCSCT--------TCEEEEEETTEEEE-ECSSCEEETTEE--ECTTCEEEEEGGGGGSCG
T ss_pred             cCceeEEEEcCCCCCCcceEeecCC--------cceEeeeECCEEEE-EECccccccccc--CCCCeEEEEECCcccccc
Confidence            3346789988764  4434442211        12355677775444 332110000000  00336999998764200 


Q ss_pred             -cCCCccc-ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce-eeecccccCCCcccEEEEEEe
Q psy463          345 -KDKVPVP-LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC-ITCDLLTSANQKCSYSGATFS  421 (790)
Q Consensus       345 -~~~~~~~-lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~s  421 (790)
                       .....+. ++.........+.|..+  .|++......  ..+|+++++.++....+. +..     + ..+.+...+.+
T Consensus       335 ~~~~~~~~~~~~~~~~~l~~~~~~~~--~l~~~~~~~~--~~~l~~~~~~~g~~~~~~~i~l-----p-~~~~~~~~~~~  404 (711)
T 4hvt_A          335 SDKTSLKILFTPTANEVFNFISTTKD--RVFLATYDNV--VAKVVTFTLENEQWTKPVVLKL-----P-YQNAIFGMSSY  404 (711)
T ss_dssp             GGCTTCEEEECCCTTEEEEEEEECSS--CEEEEEEETT--EEEEEEECEETTEECCCEEECC-----C-STTCEEEEECC
T ss_pred             cccccceEEECCCCCCeEEEEEEECC--EEEEEEEECC--EEEEEEEECCCCceEEEeccCC-----C-CCeEEEEEeec
Confidence             0001222 55544333334778765  4677666522  378999987651102333 322     1 23456666778


Q ss_pred             cCCcEEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCC
Q psy463          422 TNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKK  500 (790)
Q Consensus       422 ~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~  500 (790)
                      ++++.+++..++.. |+.++++++. ++.+.+...+.   .+....+ .++.+.+++.||.+++++++.|.+..  ..++
T Consensus       405 ~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~~---~~~~~~~-~~e~v~~~s~DG~~i~~~l~~P~~~~--~~~~  477 (711)
T 4hvt_A          405 EEEEEALITIENSIVPPTIYLWVKT-HELKIIRKALY---SFDSENY-VLEQKEATSFDGVKIPYFLVYKKGIK--FDGK  477 (711)
T ss_dssp             TTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCSS---CCCGGGE-EEEEEEEECTTSCEEEEEEEEETTCC--CSSC
T ss_pred             CcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCCc---ccCcccC-eeEEEEEECCCCeEEEEEEEecCCCC--CCCC
Confidence            89988889888887 9999999988 65555543321   1222223 57888999999999999999999865  5678


Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      +|+||++|||++... ...|...+. +.++++||+|+.+|+||++++|..|.......++...++|+.++++++++ .+.
T Consensus       478 ~P~vl~~HGG~~~~~-~~~~~~~~~-q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~-~~~  554 (711)
T 4hvt_A          478 NPTLLEAYGGFQVIN-APYFSRIKN-EVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIK-QNI  554 (711)
T ss_dssp             CCEEEECCCCTTCCC-CCCCCHHHH-HHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHH-TTS
T ss_pred             ccEEEEECCCCCCCC-CCcccHHHH-HHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHH-cCC
Confidence            999999999988753 344443322 34455899999999999999999999888888888889999999999998 688


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                      +|++||+|+|+|+||++++.++.++|+ +|+++|+.+|+.++..+.....            ...+.        ...  
T Consensus       555 ~d~~rI~i~G~S~GG~la~~~a~~~pd-~f~a~V~~~pv~D~~~~~~~~~------------~~~~~--------~~~--  611 (711)
T 4hvt_A          555 TSPEYLGIKGGSNGGLLVSVAMTQRPE-LFGAVACEVPILDMIRYKEFGA------------GHSWV--------TEY--  611 (711)
T ss_dssp             CCGGGEEEEEETHHHHHHHHHHHHCGG-GCSEEEEESCCCCTTTGGGSTT------------GGGGH--------HHH--
T ss_pred             CCcccEEEEeECHHHHHHHHHHHhCcC-ceEEEEEeCCccchhhhhcccc------------chHHH--------HHh--
Confidence            999999999999999999999998885 9999999999998764321000            00000        000  


Q ss_pred             CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCc--cEEEEecCCCcc
Q psy463          661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDK--QYLLVHGTMDDN  738 (790)
Q Consensus       661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--P~Lii~G~~D~~  738 (790)
                                                             +.|..+.....+...+|+..++++ ++  |+||+||++|.+
T Consensus       612 ---------------------------------------G~p~~~~~~~~l~~~SP~~~v~~i-~~~pPvLii~G~~D~~  651 (711)
T 4hvt_A          612 ---------------------------------------GDPEIPNDLLHIKKYAPLENLSLT-QKYPTVLITDSVLDQR  651 (711)
T ss_dssp             ---------------------------------------CCTTSHHHHHHHHHHCGGGSCCTT-SCCCEEEEEEETTCCS
T ss_pred             ---------------------------------------CCCcCHHHHHHHHHcCHHHHHhhc-CCCCCEEEEecCCCCc
Confidence                                                   000000111223344555778888 65  999999999999


Q ss_pred             cchhhhHHHHHHH-HhcCCceEEEEcCCCCCcCCC---cchHHHHHHHHHHHHhhC
Q psy463          739 VHFQQSMMLAKSL-QHADIMFQSQTYPDEEHGLIG---VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       739 v~~~~~~~l~~~l-~~~g~~~~~~~~p~~~H~~~~---~~~~~~~~i~~fl~~~l~  790 (790)
                      ||+.++.+++++| +..|++++++++|+++|++..   .....+..+.+||.++|+
T Consensus       652 Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg  707 (711)
T 4hvt_A          652 VHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALK  707 (711)
T ss_dssp             SCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHT
T ss_pred             CChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhC
Confidence            9999999999999 999999999999999999865   455677889999999874

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.89  E-value=5.2e-22  Score=213.12  Aligned_cols=314  Identities=12%  Similarity=0.041  Sum_probs=193.9

Q ss_pred             eEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeCCC
Q psy463           13 LWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINE   92 (790)
Q Consensus        13 ~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~~~   92 (790)
                      +.|||||++|||++.+++..++|++.+.+++         ..+++.....                              
T Consensus        41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~---------~~~lt~~~~~------------------------------   81 (388)
T 3pe7_A           41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV---------ATQLTEGRGD------------------------------   81 (388)
T ss_dssp             CCBCTTSCEEEEEECTTSSCEEEEEETTTCE---------EEECCCSSCB------------------------------
T ss_pred             ccCCCCCCEEEEEEcCCCCceEEEEeCCCCc---------eEEeeeCCCC------------------------------
Confidence            8899999999999987888899999998874         2332211100                              


Q ss_pred             CeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEE
Q psy463           93 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT  172 (790)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~  172 (790)
                                       ....+.|||||++|+|.+..             ..||++++++++      ...+...+....
T Consensus        82 -----------------~~~~~~~spdg~~l~~~~~~-------------~~l~~~d~~~g~------~~~~~~~~~~~~  125 (388)
T 3pe7_A           82 -----------------NTFGGFLSPDDDALFYVKDG-------------RNLMRVDLATLE------ENVVYQVPAEWV  125 (388)
T ss_dssp             -----------------CSSSCEECTTSSEEEEEETT-------------TEEEEEETTTCC------EEEEEECCTTEE
T ss_pred             -----------------CccceEEcCCCCEEEEEeCC-------------CeEEEEECCCCc------ceeeeechhhcc
Confidence                             00135899999999998731             289999998874      233332221111


Q ss_pred             --EEEeeeccCCccEEEEecccCCCCC---CC--------ccccceeEEEecCCcccccCcCCccccccccceeehhhcc
Q psy463          173 --EILAWDERENNPLLILSHNQESDGS---TP--------VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWD  239 (790)
Q Consensus       173 --~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~  239 (790)
                        ..+..++++.. ++..... ..+..   ..        ......||++|+++++      ...++             
T Consensus       126 ~~~~~~~~~dg~~-l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~------~~~l~-------------  184 (388)
T 3pe7_A          126 GYGTWVANSDCTK-LVGIEIR-REDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE------STVIL-------------  184 (388)
T ss_dssp             EEEEEEECTTSSE-EEEEEEE-GGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC------EEEEE-------------
T ss_pred             cccceeECCCCCe-ecccccc-CcccccccccchhhhhhccCCcceEEEEECCCCc------eEEee-------------
Confidence              22233555542 3322211 00000   00        0133789999999987      44555             


Q ss_pred             cCCCCCCCEEEEEEEcc-CCcEEEEEeccC---cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEE
Q psy463          240 EKENNVEPVLSRVNWAN-ESVVAAWVNRVQ---NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLIL  315 (790)
Q Consensus       240 ~~~~~~~~~~~~~~wsp-Dg~~~~~~~r~~---~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~  315 (790)
                          .....+..+.||| ||+.+++.....   ...+|++++++++..+.++.... ..+   ...+.|||||+.|+|..
T Consensus       185 ----~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~-~~~---~~~~~~spdg~~l~~~~  256 (388)
T 3pe7_A          185 ----QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAE-GES---CTHEFWVPDGSALVYVS  256 (388)
T ss_dssp             ----EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCT-TEE---EEEEEECTTSSCEEEEE
T ss_pred             ----cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCC-Ccc---cccceECCCCCEEEEEe
Confidence                3345578899999 999555544321   24579999999888777664321 011   33689999999998665


Q ss_pred             ccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE--e---EEEeeecCCCEEEEEEcCC----CCceEEE
Q psy463          316 SHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV--T---EILAWDEKENNVYFLSTQG----SPIVQHM  386 (790)
Q Consensus       316 ~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~--~---~~~~~s~dg~~l~~~~~~~----~~~~~~l  386 (790)
                      .    ..+..    ...|+++|+++++      .+.|+......  .   ....|+|||+.|+|....+    ......|
T Consensus       257 ~----~~~~~----~~~l~~~d~~~g~------~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i  322 (388)
T 3pe7_A          257 Y----LKGSP----DRFIYSADPETLE------NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL  322 (388)
T ss_dssp             E----ETTCC----CEEEEEECTTTCC------EEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred             c----CCCCC----cceEEEEecCCCc------eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence            4    33410    2259999999887      66665432211  0   1136999999999876431    0123689


Q ss_pred             EEEEcCCCCCCcceeeeccccc----CCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          387 YRINIADPTATPECITCDLLTS----ANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       387 ~~~~~~~~~~~~~~lt~~~~~~----~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      |++++++  ++.+.|+......    .+.......+.|||||++|++..+..+.++||++++..
T Consensus       323 ~~~d~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~  384 (388)
T 3pe7_A          323 YVFNMKN--GTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE  384 (388)
T ss_dssp             EEEETTT--TEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred             EEEeccC--CceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence            9999987  6777777531000    00000356689999999999998777789999998764

>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A

Probab=99.88  E-value=7.3e-22  Score=198.22  Aligned_cols=207  Identities=14%  Similarity=0.077  Sum_probs=137.9

Q ss_pred             CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463          478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR  557 (790)
Q Consensus       478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~  557 (790)
                      .||.+|+++++.|.+     ..+.|+||++||+++..   .........+.++++||+|+.+|+||+|.++.........
T Consensus        38 ~dG~~i~g~l~~P~~-----~~~~p~Vl~~HG~g~~~---~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~  109 (259)
T 4ao6_A           38 VDGRTVPGVYWSPAE-----GSSDRLVLLGHGGTTHK---KVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPT  109 (259)
T ss_dssp             ETTEEEEEEEEEESS-----SCCSEEEEEEC-----------CHHHHHHHHHHHTTEEEEEECCCC-------------C
T ss_pred             eCCeEEEEEEEeCCC-----CCCCCEEEEeCCCcccc---cchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccc
Confidence            499999999999974     45679999999998763   2222334455666799999999999987654332211111


Q ss_pred             cCC---------------ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463          558 RLG---------------TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW  622 (790)
Q Consensus       558 ~~~---------------~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~  622 (790)
                      ...               ...+.|..++++++..   .+|..+|+++|+|+||++++.++..+|  ++++++...+....
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~---~~d~~rv~~~G~S~GG~~a~~~a~~~p--ri~Aav~~~~~~~~  184 (259)
T 4ao6_A          110 DVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEA---EEGPRPTGWWGLSMGTMMGLPVTASDK--RIKVALLGLMGVEG  184 (259)
T ss_dssp             CGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHH---HHCCCCEEEEECTHHHHHHHHHHHHCT--TEEEEEEESCCTTS
T ss_pred             hhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhh---ccCCceEEEEeechhHHHHHHHHhcCC--ceEEEEEecccccc
Confidence            100               0123466667777765   367899999999999999999999886  56766654432110


Q ss_pred             ccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          623 IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       623 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                      .             +                                                                 
T Consensus       185 ~-------------~-----------------------------------------------------------------  186 (259)
T 4ao6_A          185 V-------------N-----------------------------------------------------------------  186 (259)
T ss_dssp             T-------------T-----------------------------------------------------------------
T ss_pred             c-------------c-----------------------------------------------------------------
Confidence            0             0                                                                 


Q ss_pred             CcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHH
Q psy463          703 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLE  782 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~  782 (790)
                                ..++...+++| ++|+|++||++|.+||++++.++++++...  +..++++|+ +|... ...+..+.+.
T Consensus       187 ----------~~~~~~~a~~i-~~P~Li~hG~~D~~vp~~~~~~l~~al~~~--~k~l~~~~G-~H~~~-p~~e~~~~~~  251 (259)
T 4ao6_A          187 ----------GEDLVRLAPQV-TCPVRYLLQWDDELVSLQSGLELFGKLGTK--QKTLHVNPG-KHSAV-PTWEMFAGTV  251 (259)
T ss_dssp             ----------HHHHHHHGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHCCCS--SEEEEEESS-CTTCC-CHHHHTHHHH
T ss_pred             ----------ccchhhhhccC-CCCEEEEecCCCCCCCHHHHHHHHHHhCCC--CeEEEEeCC-CCCCc-CHHHHHHHHH
Confidence                      00111556788 999999999999999999999999998644  457889998 55433 3567889999


Q ss_pred             HHHHHhhC
Q psy463          783 RFLDSCFA  790 (790)
Q Consensus       783 ~fl~~~l~  790 (790)
                      +||++|||
T Consensus       252 ~fl~~hLk  259 (259)
T 4ao6_A          252 DYLDQRLK  259 (259)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999997

>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}

Probab=99.86  E-value=1.3e-20  Score=191.84  Aligned_cols=232  Identities=15%  Similarity=0.138  Sum_probs=160.5

Q ss_pred             EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh--h
Q psy463          473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN--T  550 (790)
Q Consensus       473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~--~  550 (790)
                      .++...+|..+.+++..|....  ..++.|+||++||++........+  ......++++||.|+++|+||++.+..  .
T Consensus        17 ~~~~~~~g~~l~~~~~~~~~~~--~~~~~p~vv~~HGgg~~~~~~~~~--~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~   92 (276)
T 3hxk_A           17 STFSLNDTAWVDFYQLQNPRQN--ENYTFPAIIICPGGGYQHISQRES--DPLALAFLAQGYQVLLLNYTVMNKGTNYNF   92 (276)
T ss_dssp             EECCCBTTBEEEEECCCC--------CCBCEEEEECCSTTTSCCGGGS--HHHHHHHHHTTCEEEEEECCCTTSCCCSCT
T ss_pred             ccccCCCCeEEEEEEeCCcccc--cCCCCCEEEEEcCCccccCCchhh--HHHHHHHHHCCCEEEEecCccCCCcCCCCc
Confidence            3455668888888776665322  236789999999976432211221  222334445899999999999865321  1


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~  628 (790)
                      +.         ..+.|+.++++++.++..  .+|..+|+|+||||||.+++.++.+.....++++++.+|+.++...   
T Consensus        93 ~~---------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~---  160 (276)
T 3hxk_A           93 LS---------QNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFG---  160 (276)
T ss_dssp             HH---------HHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSS---
T ss_pred             Cc---------hHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhh---
Confidence            11         347888899999987532  2788899999999999999999987233489999999997764321   


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                      +..    ..       .+.              .++                                        ....
T Consensus       161 ~~~----~~-------~~~--------------~~~----------------------------------------~~~~  175 (276)
T 3hxk_A          161 WPS----DL-------SHF--------------NFE----------------------------------------IENI  175 (276)
T ss_dssp             CSS----SS-------SSS--------------CCC----------------------------------------CSCC
T ss_pred             CCc----ch-------hhh--------------hcC----------------------------------------chhh
Confidence            000    00       000              000                                        0000


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cc-------------
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VR-------------  774 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~-------------  774 (790)
                         ...++...+.++ .+|+|++||++|..+|++++..+++.+++.+.+++++++|+++|.+.. ..             
T Consensus       176 ---~~~~~~~~~~~~-~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~  251 (276)
T 3hxk_A          176 ---SEYNISEKVTSS-TPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSV  251 (276)
T ss_dssp             ---GGGBTTTTCCTT-SCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHH
T ss_pred             ---hhCChhhccccC-CCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchH
Confidence               122233556677 899999999999999999999999999999999999999999998875 33             


Q ss_pred             hHHHHHHHHHHHHhh
Q psy463          775 PHFYHTLERFLDSCF  789 (790)
Q Consensus       775 ~~~~~~i~~fl~~~l  789 (790)
                      .++++.+.+||+++.
T Consensus       252 ~~~~~~~~~wl~~~~  266 (276)
T 3hxk_A          252 HRWVSWASDWLERQI  266 (276)
T ss_dssp             HTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCc
Confidence            678899999999864

>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A

Probab=99.86  E-value=1.7e-20  Score=199.86  Aligned_cols=222  Identities=21%  Similarity=0.197  Sum_probs=168.4

Q ss_pred             ceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccc-------ccccchHHHHHhcCCeEEEEEc
Q psy463          469 SVEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE-------RFSVDWNLYLADNKDIVVAYID  540 (790)
Q Consensus       469 ~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~-------~~~~~~~~~~~~~~G~~v~~~d  540 (790)
                      ..+.+++... +|..+.+.++.|.++.  +.+++|+||++||+++......       .+.......+....++.|+++|
T Consensus       143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~--~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd  220 (380)
T 3doh_A          143 DFLAFTFKDPETGVEIPYRLFVPKDVN--PDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQ  220 (380)
T ss_dssp             GEEEEEEECTTTCCEEEEEEECCSSCC--TTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEEC
T ss_pred             cccceeeccCCCCcEEEEEEEcCCCCC--CCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEec
Confidence            3566788888 9999999999999876  6788999999999886521000       0000011223345789999999


Q ss_pred             CCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          541 GRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       541 ~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      ++|.++++..|........+...+.|+.++++++.++++ +|.+||+|+||||||++++.++.++|+ .++++++.+|..
T Consensus       221 ~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~-~d~~ri~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~sg~~  298 (380)
T 3doh_A          221 CPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYN-IDENRIYITGLSMGGYGTWTAIMEFPE-LFAAAIPICGGG  298 (380)
T ss_dssp             CCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSC-EEEEEEEEEEETHHHHHHHHHHHHCTT-TCSEEEEESCCC
T ss_pred             CCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcC-CCcCcEEEEEECccHHHHHHHHHhCCc-cceEEEEecCCC
Confidence            999887776655433333345678889999999988655 888899999999999999999998885 899999988853


Q ss_pred             CcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccC
Q psy463          621 DWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMG  700 (790)
Q Consensus       621 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~  700 (790)
                      +.                                                                              
T Consensus       299 ~~------------------------------------------------------------------------------  300 (380)
T 3doh_A          299 DV------------------------------------------------------------------------------  300 (380)
T ss_dssp             CG------------------------------------------------------------------------------
T ss_pred             Ch------------------------------------------------------------------------------
Confidence            11                                                                              


Q ss_pred             CCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCC---CCcCCC--cch
Q psy463          701 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDE---EHGLIG--VRP  775 (790)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~---~H~~~~--~~~  775 (790)
                                       ..+.+++.+|+|++||+.|..+|++++..+++.|+++|.++++++||++   +|.+..  ...
T Consensus       301 -----------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~  363 (380)
T 3doh_A          301 -----------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWI  363 (380)
T ss_dssp             -----------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHH
T ss_pred             -----------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHH
Confidence                             1223342489999999999999999999999999999999999999999   443333  344


Q ss_pred             HHHH--HHHHHHHHhh
Q psy463          776 HFYH--TLERFLDSCF  789 (790)
Q Consensus       776 ~~~~--~i~~fl~~~l  789 (790)
                      ..+.  .+.+||.++.
T Consensus       364 ~~~~~~~i~~wL~~~~  379 (380)
T 3doh_A          364 PTYENQEAIEWLFEQS  379 (380)
T ss_dssp             HHHTCHHHHHHHHTCC
T ss_pred             HhcCCHHHHHHHHhhc
Confidence            5555  8999998764

>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41

Probab=99.86  E-value=4.2e-20  Score=197.66  Aligned_cols=239  Identities=15%  Similarity=0.099  Sum_probs=166.1

Q ss_pred             CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       468 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ..++.+.++. +|.++.++++.|.+     .++.|+||++||+.+..   ..+. .. ...++++||.|+++|+||+|.+
T Consensus       125 ~~~~~v~~~~-dg~~i~~~l~~p~~-----~~~~P~vl~~hG~~~~~---~~~~-~~-~~~l~~~G~~v~~~d~rG~G~s  193 (386)
T 2jbw_A          125 PPAERHELVV-DGIPMPVYVRIPEG-----PGPHPAVIMLGGLESTK---EESF-QM-ENLVLDRGMATATFDGPGQGEM  193 (386)
T ss_dssp             SCEEEEEEEE-TTEEEEEEEECCSS-----SCCEEEEEEECCSSCCT---TTTH-HH-HHHHHHTTCEEEEECCTTSGGG
T ss_pred             CCeEEEEEEe-CCEEEEEEEEcCCC-----CCCCCEEEEeCCCCccH---HHHH-HH-HHHHHhCCCEEEEECCCCCCCC
Confidence            5678888888 89999999999974     35689999999987653   2221 22 3444458999999999997654


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT  627 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~  627 (790)
                      ..      ..........++.++++++.+ .+.++.++|+|+|||+||++++.++.+ ++ +++++|+. |+.++.....
T Consensus       194 ~~------~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~l~G~S~GG~la~~~a~~-~~-~~~a~v~~-~~~~~~~~~~  263 (386)
T 2jbw_A          194 FE------YKRIAGDYEKYTSAVVDLLTK-LEAIRNDAIGVLGRSLGGNYALKSAAC-EP-RLAACISW-GGFSDLDYWD  263 (386)
T ss_dssp             TT------TCCSCSCHHHHHHHHHHHHHH-CTTEEEEEEEEEEETHHHHHHHHHHHH-CT-TCCEEEEE-SCCSCSTTGG
T ss_pred             CC------CCCCCccHHHHHHHHHHHHHh-CCCcCcccEEEEEEChHHHHHHHHHcC-Cc-ceeEEEEe-ccCChHHHHH
Confidence            10      011111223457788888887 677888999999999999999999998 54 89999999 8877643211


Q ss_pred             cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHH-HHHHhcCcchhcccccCCCCcCC
Q psy463          628 IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLA-KSLQHADIMFQSQRYMGLPTFED  706 (790)
Q Consensus       628 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~  706 (790)
                      .+..             .+...     .....        |..       ....+. ..+                    
T Consensus       264 ~~~~-------------~~~~~-----~~~~~--------g~~-------~~~~~~~~~~--------------------  290 (386)
T 2jbw_A          264 LETP-------------LTKES-----WKYVS--------KVD-------TLEEARLHVH--------------------  290 (386)
T ss_dssp             GSCH-------------HHHHH-----HHHHT--------TCS-------SHHHHHHHHH--------------------
T ss_pred             hccH-------------HHHHH-----HHHHh--------CCC-------CHHHHHHHHH--------------------
Confidence            0000             00000     00000        000       000111 111                    


Q ss_pred             cchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHH-HhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHH
Q psy463          707 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSL-QHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFL  785 (790)
Q Consensus       707 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l-~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl  785 (790)
                           ...++...++++ ++|+|++||++|. +++.++..+++.+ +.   +++++++|+++|.+..+..++.+.+.+||
T Consensus       291 -----~~~~~~~~~~~i-~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~---~~~~~~~~~~gH~~~~~~~~~~~~i~~fl  360 (386)
T 2jbw_A          291 -----AALETRDVLSQI-ACPTYILHGVHDE-VPLSFVDTVLELVPAE---HLNLVVEKDGDHCCHNLGIRPRLEMADWL  360 (386)
T ss_dssp             -----HHTCCTTTGGGC-CSCEEEEEETTSS-SCTHHHHHHHHHSCGG---GEEEEEETTCCGGGGGGTTHHHHHHHHHH
T ss_pred             -----HhCChhhhhccc-CCCEEEEECCCCC-CCHHHHHHHHHHhcCC---CcEEEEeCCCCcCCccchHHHHHHHHHHH
Confidence                 222333668888 8999999999999 9999999999988 64   57999999999977557889999999999


Q ss_pred             HHhhC
Q psy463          786 DSCFA  790 (790)
Q Consensus       786 ~~~l~  790 (790)
                      +++|+
T Consensus       361 ~~~l~  365 (386)
T 2jbw_A          361 YDVLV  365 (386)
T ss_dssp             HHHHT
T ss_pred             HHhcC
Confidence            99874

>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*

Probab=99.86  E-value=1.9e-20  Score=187.62  Aligned_cols=245  Identities=17%  Similarity=0.169  Sum_probs=155.6

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      ++.. +|.+++++++.|.+    ..++.|+||++||.+++.. ...|  ......++++||.|+++|+||+|.+......
T Consensus         5 ~~~~-~g~~l~~~~~~p~~----~~~~~p~vvl~HG~~~~~~-~~~~--~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~   76 (251)
T 2wtm_A            5 YIDC-DGIKLNAYLDMPKN----NPEKCPLCIIIHGFTGHSE-ERHI--VAVQETLNEIGVATLRADMYGHGKSDGKFED   76 (251)
T ss_dssp             EEEE-TTEEEEEEEECCTT----CCSSEEEEEEECCTTCCTT-SHHH--HHHHHHHHHTTCEEEEECCTTSTTSSSCGGG
T ss_pred             EEec-CCcEEEEEEEccCC----CCCCCCEEEEEcCCCcccc-cccH--HHHHHHHHHCCCEEEEecCCCCCCCCCcccc
Confidence            4443 88999999998864    2346789999999877621 1122  2223445558999999999998865432111


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhh
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERY  633 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~  633 (790)
                      ..    ....++|+.++++++.+ ...+  ++++++||||||.+++.++.++|+ +++++|+.+|.......   .....
T Consensus        77 ~~----~~~~~~d~~~~~~~l~~-~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~---~~~~~  145 (251)
T 2wtm_A           77 HT----LFKWLTNILAVVDYAKK-LDFV--TDIYMAGHSQGGLSVMLAAAMERD-IIKALIPLSPAAMIPEI---ARTGE  145 (251)
T ss_dssp             CC----HHHHHHHHHHHHHHHTT-CTTE--EEEEEEEETHHHHHHHHHHHHTTT-TEEEEEEESCCTTHHHH---HHHTE
T ss_pred             CC----HHHHHHHHHHHHHHHHc-Cccc--ceEEEEEECcchHHHHHHHHhCcc-cceEEEEECcHHHhHHH---Hhhhh
Confidence            00    01235677777777765 3323  489999999999999999999885 89999999886432110   00000


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhh
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKI  713 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  713 (790)
                      +...       .+..       ...  ...+.  .......    ...+...+..                         
T Consensus       146 ~~~~-------~~~~-------~~~--~~~~~--~~~~~~~----~~~~~~~~~~-------------------------  178 (251)
T 2wtm_A          146 LLGL-------KFDP-------ENI--PDELD--AWDGRKL----KGNYVRVAQT-------------------------  178 (251)
T ss_dssp             ETTE-------ECBT-------TBC--CSEEE--ETTTEEE----ETHHHHHHTT-------------------------
T ss_pred             hccc-------cCCc-------hhc--chHHh--hhhcccc----chHHHHHHHc-------------------------
Confidence            0000       0000       000  00000  0000000    0011111110                         


Q ss_pred             hhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhhC
Q psy463          714 AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       714 ~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l~  790 (790)
                      ..+...+.++ ++|+|++||++|..+|++.++.+++.++    +++++++|+++|.+ . .++++.+.+.+||+++|+
T Consensus       179 ~~~~~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~~  250 (251)
T 2wtm_A          179 IRVEDFVDKY-TKPVLIVHGDQDEAVPYEASVAFSKQYK----NCKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQIA  250 (251)
T ss_dssp             CCHHHHHHHC-CSCEEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEETTCCTTC-TTTHHHHHHHHHHHHHHHHC
T ss_pred             cCHHHHHHhc-CCCEEEEEeCCCCCcChHHHHHHHHhCC----CcEEEEECCCCccc-chhHHHHHHHHHHHHHHhcc
Confidence            1122556788 9999999999999999999998887764    46899999999999 7 888999999999998874

>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}

Probab=99.86  E-value=1.4e-20  Score=187.12  Aligned_cols=220  Identities=14%  Similarity=0.083  Sum_probs=159.7

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+.++++. +|..+.++++.|.+    ..++.|+||++||..+..   ..+. .+. ..++++||.|+++|++|.++...
T Consensus         6 ~~~~~~~~-~~~~~~~~~~~p~~----~~~~~p~vv~~HG~~g~~---~~~~-~~~-~~l~~~G~~v~~~d~~g~g~~~~   75 (241)
T 3f67_A            6 AGETSIPS-QGENMPAYHARPKN----ADGPLPIVIVVQEIFGVH---EHIR-DLC-RRLAQEGYLAIAPELYFRQGDPN   75 (241)
T ss_dssp             EEEEEEEE-TTEEEEEEEEEETT----CCSCEEEEEEECCTTCSC---HHHH-HHH-HHHHHTTCEEEEECTTTTTCCGG
T ss_pred             eeeEEEec-CCcceEEEEecCCC----CCCCCCEEEEEcCcCccC---HHHH-HHH-HHHHHCCcEEEEecccccCCCCC
Confidence            45567777 89999999999985    335689999999977652   2221 233 34445899999999998766543


Q ss_pred             hhHhhh-------hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463          550 TLKYAG-------YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW  622 (790)
Q Consensus       550 ~~~~~~-------~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~  622 (790)
                      .+....       ........++|+.++++++.+ .+ +|..+|+|+|||+||.+++.++.++|.  ++++++..+....
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~-~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~v~~~~~~~~  151 (241)
T 3f67_A           76 EYHDIPTLFKELVSKVPDAQVLADLDHVASWAAR-HG-GDAHRLLITGFCWGGRITWLYAAHNPQ--LKAAVAWYGKLVG  151 (241)
T ss_dssp             GCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHT-TT-EEEEEEEEEEETHHHHHHHHHHTTCTT--CCEEEEESCCCSC
T ss_pred             chhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHh-cc-CCCCeEEEEEEcccHHHHHHHHhhCcC--cceEEEEeccccC
Confidence            322110       001112347889999999987 55 778899999999999999999998874  5666665543110


Q ss_pred             ccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          623 IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       623 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                      .             +      ..+                                                        
T Consensus       152 ~-------------~------~~~--------------------------------------------------------  156 (241)
T 3f67_A          152 E-------------K------SLN--------------------------------------------------------  156 (241)
T ss_dssp             C-------------C------CSS--------------------------------------------------------
T ss_pred             C-------------C------ccC--------------------------------------------------------
Confidence            0             0      000                                                        


Q ss_pred             CcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC---------c
Q psy463          703 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG---------V  773 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~---------~  773 (790)
                               ...++...+.++ ++|+|+++|++|..+|++.+..+++.+++.+.+++++++|+++|.+..         .
T Consensus       157 ---------~~~~~~~~~~~~-~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~  226 (241)
T 3f67_A          157 ---------SPKHPVDIAVDL-NAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEES  226 (241)
T ss_dssp             ---------SCCCHHHHGGGC-CSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHH
T ss_pred             ---------CccCHHHhhhhc-CCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHH
Confidence                     001112556777 899999999999999999999999999999999999999999998863         3


Q ss_pred             chHHHHHHHHHHHHh
Q psy463          774 RPHFYHTLERFLDSC  788 (790)
Q Consensus       774 ~~~~~~~i~~fl~~~  788 (790)
                      .++.++.+.+||++|
T Consensus       227 ~~~~~~~~~~fl~~~  241 (241)
T 3f67_A          227 AKDGWQRMLAWFAQY  241 (241)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhhC
Confidence            467889999999864

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.86  E-value=1.2e-20  Score=202.88  Aligned_cols=313  Identities=12%  Similarity=0.059  Sum_probs=187.7

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      ...+.|||||++|||++..++...+|+++..+++         ..+++.....                           
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~---------~~~l~~~~~~---------------------------   81 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ---------AVQLTEGKGD---------------------------   81 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE---------EEECCCSSCB---------------------------
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCc---------EEEeecCCCC---------------------------
Confidence            4678999999999999988777889999988774         2222211100                           


Q ss_pred             CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463           90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF  169 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~  169 (790)
                                          ....+.|||||++|+|.+..             .+||++++++++      ..+++....
T Consensus        82 --------------------~~~~~~~spdg~~l~~~~~~-------------~~l~~~d~~~~~------~~~~~~~~~  122 (396)
T 3c5m_A           82 --------------------NTFGGFISTDERAFFYVKNE-------------LNLMKVDLETLE------EQVIYTVDE  122 (396)
T ss_dssp             --------------------CTTTCEECTTSSEEEEEETT-------------TEEEEEETTTCC------EEEEEECCT
T ss_pred             --------------------ccccceECCCCCEEEEEEcC-------------CcEEEEECCCCC------cEEEEeccc
Confidence                                00125778888888887631             168888887763      233333211


Q ss_pred             EEEEEEeeeccCCccEEEEe-----------cccCCCCCCCc-------cccceeEEEecCCcccccCcCCccccccccc
Q psy463          170 TVTEILAWDERENNPLLILS-----------HNQESDGSTPV-------DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT  231 (790)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~  231 (790)
                      .      |.++++. ++|..           .....++..+.       .....||++|+++++      ...++     
T Consensus       123 ~------~~~~g~~-l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~------~~~~~-----  184 (396)
T 3c5m_A          123 E------WKGYGTW-VANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE------LEVIH-----  184 (396)
T ss_dssp             T------EEEEEEE-EECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC------EEEEE-----
T ss_pred             c------cCCCCCE-EEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc------EEeec-----
Confidence            1      1111110 11110           00011111110       134689999999876      33333     


Q ss_pred             eeehhhcccCCCCCCCEEEEEEEcc-CCcEEEEEeccCc---ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccC
Q psy463          232 VTEILAWDEKENNVEPVLSRVNWAN-ESVVAAWVNRVQN---RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD  307 (790)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~~~~~~r~~~---~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spD  307 (790)
                                  .....+..+.||| ||+.+++...+..   ..+|+++++++++.+.++...  ..+  ....+.||||
T Consensus       185 ------------~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~--~~~--~~~~~~~spd  248 (396)
T 3c5m_A          185 ------------QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA--EGE--SCTHEFWIPD  248 (396)
T ss_dssp             ------------EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCC--TTE--EEEEEEECTT
T ss_pred             ------------cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccC--CCc--cccceEECCC
Confidence                        2344567899999 8885555443221   156999999888766665411  111  1346899999


Q ss_pred             CCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeec-CCCEEEEEEcCCCC-----
Q psy463          308 GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE-KENNVYFLSTQGSP-----  381 (790)
Q Consensus       308 g~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~-dg~~l~~~~~~~~~-----  381 (790)
                      |+.|++...    ..+..    ...|+++|+++++      .+.++.... . . +.|+| ||+.+++.+.. .|     
T Consensus       249 g~~l~~~~~----~~~~~----~~~l~~~d~~~g~------~~~l~~~~~-~-~-~~~s~~dg~~l~~~~~~-~p~~~~~  310 (396)
T 3c5m_A          249 GSAMAYVSY----FKGQT----DRVIYKANPETLE------NEEVMVMPP-C-S-HLMSNFDGSLMVGDGCD-APVDVAD  310 (396)
T ss_dssp             SSCEEEEEE----ETTTC----CEEEEEECTTTCC------EEEEEECCS-E-E-EEEECSSSSEEEEEECC-C------
T ss_pred             CCEEEEEec----CCCCc----cceEEEEECCCCC------eEEeeeCCC-C-C-CCccCCCCceEEEecCC-cceeecc
Confidence            999986554    33410    2349999998887      666654322 1 2 78999 99977775432 11     


Q ss_pred             -------ceEEEEEEEcCCCCCCcceeeeccccc----CCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          382 -------IVQHMYRINIADPTATPECITCDLLTS----ANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       382 -------~~~~l~~~~~~~~~~~~~~lt~~~~~~----~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                             ....||++++.+  ++.+.|+......    .........+.|||||++|++.....+.++||++++.+++.+
T Consensus       311 ~~~~~~~~~~~i~~~d~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~  388 (396)
T 3c5m_A          311 ADSYNIENDPFLYVLNTKA--KSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH  388 (396)
T ss_dssp             ----CCCCCCEEEEEETTT--TBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred             ccccccCCCCcEEEEeccc--CceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence                   236899999987  6666776521000    000001345789999999999887767889999998876554


Q ss_pred             E
Q psy463          451 Y  451 (790)
Q Consensus       451 ~  451 (790)
                      .
T Consensus       389 ~  389 (396)
T 3c5m_A          389 L  389 (396)
T ss_dssp             -
T ss_pred             c
Confidence            3

>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36

Probab=99.86  E-value=3.8e-20  Score=185.08  Aligned_cols=209  Identities=16%  Similarity=0.168  Sum_probs=158.2

Q ss_pred             EEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhh
Q psy463          472 YMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTL  551 (790)
Q Consensus       472 ~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~  551 (790)
                      .+.+...+| ++.++++.|.      .++.|+||++||.++................++++||.|+++|+||.+.+...+
T Consensus        25 ~~~~~~~~g-~l~~~~~~p~------~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~   97 (249)
T 2i3d_A           25 EVIFNGPAG-RLEGRYQPSK------EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEF   97 (249)
T ss_dssp             EEEEEETTE-EEEEEEECCS------STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC
T ss_pred             EEEEECCCc-eEEEEEEcCC------CCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
Confidence            778888888 8999988875      245689999999754321111111122334455589999999999977544321


Q ss_pred             HhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchh
Q psy463          552 KYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSE  631 (790)
Q Consensus       552 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~  631 (790)
                      .      .....++|+.++++++..+ . .+..+++++|||+||.+++.++.++|.  ++++++.+|..+...       
T Consensus        98 ~------~~~~~~~d~~~~i~~l~~~-~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~-------  160 (249)
T 2i3d_A           98 D------HGAGELSDAASALDWVQSL-H-PDSKSCWVAGYSFGAWIGMQLLMRRPE--IEGFMSIAPQPNTYD-------  160 (249)
T ss_dssp             C------SSHHHHHHHHHHHHHHHHH-C-TTCCCEEEEEETHHHHHHHHHHHHCTT--EEEEEEESCCTTTSC-------
T ss_pred             C------CccchHHHHHHHHHHHHHh-C-CCCCeEEEEEECHHHHHHHHHHhcCCC--ccEEEEEcCchhhhh-------
Confidence            1      1223458899999999874 3 466799999999999999999998874  899999888643210       


Q ss_pred             hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh
Q psy463          632 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY  711 (790)
Q Consensus       632 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  711 (790)
                                                                                  .                   
T Consensus       161 ------------------------------------------------------------~-------------------  161 (249)
T 2i3d_A          161 ------------------------------------------------------------F-------------------  161 (249)
T ss_dssp             ------------------------------------------------------------C-------------------
T ss_pred             ------------------------------------------------------------h-------------------
Confidence                                                                        0                   


Q ss_pred             hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHh-cCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          712 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQH-ADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       712 ~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~-~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                            ..+.++ ++|+|+++|++|..+|++.+..+++.++. .+.+++++++|+++|.+....+++.+.+.+||+++++
T Consensus       162 ------~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~i~~fl~~~l~  234 (249)
T 2i3d_A          162 ------SFLAPC-PSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDRRLN  234 (249)
T ss_dssp             ------TTCTTC-CSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHHHHHHT
T ss_pred             ------hhhccc-CCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccccCHHHHHHHHHHHHHHhcC
Confidence                  223455 89999999999999999999999999986 4557899999999999876788999999999998763

>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}

Probab=99.85  E-value=4e-20  Score=199.99  Aligned_cols=238  Identities=14%  Similarity=0.150  Sum_probs=159.0

Q ss_pred             EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCc
Q psy463          482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGT  561 (790)
Q Consensus       482 ~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~  561 (790)
                      .+.+.++.|.+     .++.|+||++||+++..       ..+....++++||.|+++|+||++.....        ...
T Consensus       144 ~l~~~l~~P~~-----~~~~P~Vv~~hG~~~~~-------~~~~a~~La~~Gy~V~a~D~rG~g~~~~~--------~~~  203 (422)
T 3k2i_A          144 RVRATLFLPPG-----PGPFPGIIDIFGIGGGL-------LEYRASLLAGHGFATLALAYYNFEDLPNN--------MDN  203 (422)
T ss_dssp             TEEEEEEECSS-----SCCBCEEEEECCTTCSC-------CCHHHHHHHTTTCEEEEEECSSSTTSCSS--------CSC
T ss_pred             cEEEEEEcCCC-----CCCcCEEEEEcCCCcch-------hHHHHHHHHhCCCEEEEEccCCCCCCCCC--------ccc
Confidence            68999999974     45689999999987652       12335566678999999999997654322        222


Q ss_pred             cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccC
Q psy463          562 VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFED  641 (790)
Q Consensus       562 ~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~  641 (790)
                      ..++|+.++++++.+ ...+|..+|+|+||||||.+++.++.++|.  ++++++.+|..........+....+...  ..
T Consensus       204 ~~~~d~~~~~~~l~~-~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~--v~a~V~~~~~~~~~~~~~~~~~~~~~~~--~~  278 (422)
T 3k2i_A          204 ISLEYFEEAVCYMLQ-HPQVKGPGIGLLGISLGADICLSMASFLKN--VSATVSINGSGISGNTAINYKHSSIPPL--GY  278 (422)
T ss_dssp             EETHHHHHHHHHHHT-STTBCCSSEEEEEETHHHHHHHHHHHHCSS--EEEEEEESCCSBCCSSCEEETTEEECCC--CB
T ss_pred             CCHHHHHHHHHHHHh-CcCcCCCCEEEEEECHHHHHHHHHHhhCcC--ccEEEEEcCcccccCCchhhcCCcCCCc--cc
Confidence            468899999999988 666888999999999999999999998874  8899988887533211111100000000  00


Q ss_pred             chhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhh
Q psy463          642 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVD  721 (790)
Q Consensus       642 ~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  721 (790)
                      .....          .....                            +.. ........+     . ..........++
T Consensus       279 ~~~~~----------~~~~~----------------------------~~~-~~~~~~~~~-----~-~~~~~~~~~~~~  313 (422)
T 3k2i_A          279 DLRRI----------KVAFS----------------------------GLV-DIVDIRNAL-----V-GGYKNPSMIPIE  313 (422)
T ss_dssp             CGGGC----------EECTT----------------------------SCE-ECTTCBCCC-----T-TGGGSTTBCCGG
T ss_pred             chhhc----------ccCcc----------------------------hhH-HHHHHHhhh-----h-hcccccccccHH
Confidence            00000          00000                            000 000000000     0 000111123467


Q ss_pred             ccCCccEEEEecCCCcccchhhh-HHHHHHHHhcCCc-eEEEEcCCCCCcCCC---------------------------
Q psy463          722 RIRDKQYLLVHGTMDDNVHFQQS-MMLAKSLQHADIM-FQSQTYPDEEHGLIG---------------------------  772 (790)
Q Consensus       722 ~i~~~P~Lii~G~~D~~v~~~~~-~~l~~~l~~~g~~-~~~~~~p~~~H~~~~---------------------------  772 (790)
                      ++ ++|+|++||++|.++|.... +.+.+.|++.+.+ +++++||+++|.+..                           
T Consensus       314 ~i-~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~  392 (422)
T 3k2i_A          314 KA-QGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAH  392 (422)
T ss_dssp             GC-CSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHH
T ss_pred             HC-CCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHH
Confidence            88 99999999999999998866 6899999999988 899999999999821                           


Q ss_pred             --cchHHHHHHHHHHHHhhC
Q psy463          773 --VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       773 --~~~~~~~~i~~fl~~~l~  790 (790)
                        ..+++++.+.+||+++|+
T Consensus       393 ~~~~~~~~~~i~~Fl~~~L~  412 (422)
T 3k2i_A          393 SKAQEDAWKQILAFFCKHLG  412 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHhcC
Confidence              366789999999999874

>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}

Probab=99.85  E-value=4.9e-20  Score=200.09  Aligned_cols=238  Identities=17%  Similarity=0.205  Sum_probs=158.4

Q ss_pred             EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCc
Q psy463          482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGT  561 (790)
Q Consensus       482 ~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~  561 (790)
                      .+.++++.|.+     .++.|+||++||+++..       ..+....++++||.|+++|+||.+.....        ...
T Consensus       160 ~l~~~l~~P~~-----~~~~P~Vv~lhG~~~~~-------~~~~a~~La~~Gy~Vla~D~rG~~~~~~~--------~~~  219 (446)
T 3hlk_A          160 RVRGTLFLPPE-----PGPFPGIVDMFGTGGGL-------LEYRASLLAGKGFAVMALAYYNYEDLPKT--------MET  219 (446)
T ss_dssp             TEEEEEEECSS-----SCCBCEEEEECCSSCSC-------CCHHHHHHHTTTCEEEEECCSSSTTSCSC--------CSE
T ss_pred             eEEEEEEeCCC-----CCCCCEEEEECCCCcch-------hhHHHHHHHhCCCEEEEeccCCCCCCCcc--------hhh
Confidence            68999999974     45679999999997752       12335566668999999999997654432        122


Q ss_pred             cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccC
Q psy463          562 VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFED  641 (790)
Q Consensus       562 ~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~  641 (790)
                      ..++|+.++++++.+ .+.+|..+|+|+||||||.+++.++.++|.  ++++++.+|..........+....+...  ..
T Consensus       220 ~~~~d~~~a~~~l~~-~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~--v~a~V~~~~~~~~~~~~~~~~~~~~~~~--~~  294 (446)
T 3hlk_A          220 LHLEYFEEAMNYLLS-HPEVKGPGVGLLGISKGGELCLSMASFLKG--ITAAVVINGSVANVGGTLRYKGETLPPV--GV  294 (446)
T ss_dssp             EEHHHHHHHHHHHHT-STTBCCSSEEEEEETHHHHHHHHHHHHCSC--EEEEEEESCCSBCCSSEEEETTEEECCC--CB
T ss_pred             CCHHHHHHHHHHHHh-CCCCCCCCEEEEEECHHHHHHHHHHHhCCC--ceEEEEEcCcccccCCCccccCccCCcc--cc
Confidence            458899999999988 666888999999999999999999998874  8888888886532211111111000000  00


Q ss_pred             chhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhh
Q psy463          642 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVD  721 (790)
Q Consensus       642 ~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  721 (790)
                      ......          ....                            +..    .+.  ..+...... ........+.
T Consensus       295 ~~~~~~----------~~~~----------------------------~~~----~~~--~~~~~~~~~-~~~~~~~~~~  329 (446)
T 3hlk_A          295 NRNRIK----------VTKD----------------------------GYA----DIV--DVLNSPLEG-PDQKSFIPVE  329 (446)
T ss_dssp             CGGGCE----------ECSS----------------------------SCE----ECT--TCBCCTTSG-GGGGGBCCGG
T ss_pred             chhccc----------cccc----------------------------hHH----HHH--HHHhchhhc-cccccccCHH
Confidence            000000          0000                            000    000  000000000 0011113367


Q ss_pred             ccCCccEEEEecCCCcccchhh-hHHHHHHHHhcCCc-eEEEEcCCCCCcCCC---------------------------
Q psy463          722 RIRDKQYLLVHGTMDDNVHFQQ-SMMLAKSLQHADIM-FQSQTYPDEEHGLIG---------------------------  772 (790)
Q Consensus       722 ~i~~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~g~~-~~~~~~p~~~H~~~~---------------------------  772 (790)
                      ++ ++|+|++||++|..+|... +..+++.|+.++.+ +++++||+++|.+..                           
T Consensus       330 ~i-~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~  408 (446)
T 3hlk_A          330 RA-ESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAH  408 (446)
T ss_dssp             GC-CSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHH
T ss_pred             HC-CCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHH
Confidence            78 8999999999999999855 47999999999998 899999999999831                           


Q ss_pred             --cchHHHHHHHHHHHHhhC
Q psy463          773 --VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       773 --~~~~~~~~i~~fl~~~l~  790 (790)
                        ..+++++.+.+||+++|+
T Consensus       409 ~~a~~~~~~~i~~Fl~~~L~  428 (446)
T 3hlk_A          409 AMAQVDAWKQLQTFFHKHLG  428 (446)
T ss_dssp             HHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHhhC
Confidence              256789999999999874

>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A

Probab=99.85  E-value=1.2e-20  Score=192.16  Aligned_cols=229  Identities=12%  Similarity=-0.021  Sum_probs=142.6

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .+.||++||.+++.   ..|.  .....++++||.|+++|+||+|.+..........    ..+.|+.++++++.+.   
T Consensus        51 ~~~VlllHG~~~s~---~~~~--~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~----~~~~d~~~~~~~l~~~---  118 (281)
T 4fbl_A           51 RIGVLVSHGFTGSP---QSMR--FLAEGFARAGYTVATPRLTGHGTTPAEMAASTAS----DWTADIVAAMRWLEER---  118 (281)
T ss_dssp             SEEEEEECCTTCCG---GGGH--HHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHH----HHHHHHHHHHHHHHHH---
T ss_pred             CceEEEECCCCCCH---HHHH--HHHHHHHHCCCEEEEECCCCCCCCCccccCCCHH----HHHHHHHHHHHHHHhC---
Confidence            45688999987762   2332  3445566689999999999998775443322111    2367777888887652   


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                        .++++|+||||||.+++.++.++|+ +++++++.+|...+........ .+....  .......        ...+..
T Consensus       119 --~~~v~lvG~S~GG~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~--------~~~~~~  184 (281)
T 4fbl_A          119 --CDVLFMTGLSMGGALTVWAAGQFPE-RFAGIMPINAALRMESPDLAAL-AFNPDA--PAELPGI--------GSDIKA  184 (281)
T ss_dssp             --CSEEEEEEETHHHHHHHHHHHHSTT-TCSEEEEESCCSCCCCHHHHHH-HTCTTC--CSEEECC--------CCCCSS
T ss_pred             --CCeEEEEEECcchHHHHHHHHhCch-hhhhhhcccchhcccchhhHHH-HHhHhh--HHhhhcc--------hhhhhh
Confidence              2689999999999999999999986 8899999888755432110000 000000  0000000        000000


Q ss_pred             CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccc
Q psy463          661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH  740 (790)
Q Consensus       661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~  740 (790)
                      ....   -......+......+.+...                           .....++++ ++|+|++||++|..+|
T Consensus       185 ~~~~---~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~i-~~P~Lii~G~~D~~v~  233 (281)
T 4fbl_A          185 EGVK---ELAYPVTPVPAIKHLITIGA---------------------------VAEMLLPRV-KCPALIIQSREDHVVP  233 (281)
T ss_dssp             TTCC---CCCCSEEEGGGHHHHHHHHH---------------------------HHHHHGGGC-CSCEEEEEESSCSSSC
T ss_pred             HHHH---HhhhccCchHHHHHHHHhhh---------------------------hcccccccc-CCCEEEEEeCCCCCcC
Confidence            0000   00000011111111111000                           011456788 9999999999999999


Q ss_pred             hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHh
Q psy463          741 FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSC  788 (790)
Q Consensus       741 ~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~  788 (790)
                      ++.++.+++.+...  +++++++|+++|.+..  .++.+.+.|.+||++|
T Consensus       234 ~~~~~~l~~~l~~~--~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~H  281 (281)
T 4fbl_A          234 PHNGELIYNGIGST--EKELLWLENSYHVATLDNDKELILERSLAFIRKH  281 (281)
T ss_dssp             THHHHHHHHHCCCS--SEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhCCCC--CcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence            99999999887643  5689999999998765  5788999999999986

>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A

Probab=99.84  E-value=2.6e-20  Score=193.46  Aligned_cols=234  Identities=13%  Similarity=0.099  Sum_probs=156.8

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG  560 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~  560 (790)
                      ..+.+.++.|.+     .++.|+||++|||++.......+. .+...++.+.||.|+.+|||+++.....          
T Consensus        65 ~~i~~~~~~p~~-----~~~~p~vv~~HGGg~~~g~~~~~~-~~~~~la~~~g~~vv~~dyr~~p~~~~~----------  128 (322)
T 3fak_A           65 AGCAAEWVRAPG-----CQAGKAILYLHGGGYVMGSINTHR-SMVGEISRASQAAALLLDYRLAPEHPFP----------  128 (322)
T ss_dssp             TTEEEEEEECTT-----CCTTCEEEEECCSTTTSCCHHHHH-HHHHHHHHHHTSEEEEECCCCTTTSCTT----------
T ss_pred             CCeEEEEEeCCC-----CCCccEEEEEcCCccccCChHHHH-HHHHHHHHhcCCEEEEEeCCCCCCCCCC----------
Confidence            348888999974     356899999999875432122222 3445555556999999999987754422          


Q ss_pred             ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                       ..++|+.++++|+.++  .+|.+||+|+|+|+||++++.++.+.++   ..++++++.+|+.++......+......  
T Consensus       129 -~~~~D~~~a~~~l~~~--~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~--  203 (322)
T 3fak_A          129 -AAVEDGVAAYRWLLDQ--GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEA--  203 (322)
T ss_dssp             -HHHHHHHHHHHHHHHH--TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTTTT--
T ss_pred             -cHHHHHHHHHHHHHHc--CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhCcc--
Confidence             3478999999999985  4788999999999999999998876553   2488999999998765322111111000  


Q ss_pred             CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                                                       ++.........+...... +..      ...          ...+++
T Consensus       204 ---------------------------------~~~~~~~~~~~~~~~~~~-~~~------~~~----------~~~sp~  233 (322)
T 3fak_A          204 ---------------------------------DPMVAPGGINKMAARYLN-GAD------AKH----------PYASPN  233 (322)
T ss_dssp             ---------------------------------CCSCCSSHHHHHHHHHHT-TSC------TTC----------TTTCGG
T ss_pred             ---------------------------------CcccCHHHHHHHHHHhcC-CCC------CCC----------cccCCC
Confidence                                             000000111111111110 000      000          000111


Q ss_pred             -hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cchHHHHHHHHHHHHhh
Q psy463          718 -NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       718 -~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~~~~~~i~~fl~~~l  789 (790)
                       ..+..+  .|+||+||+.|..  ..++..+++.|+++|+++++++||+++|.+..      ...++++.+.+||+++|
T Consensus       234 ~~~~~~~--pP~li~~g~~D~~--~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l  308 (322)
T 3fak_A          234 FANLKGL--PPLLIHVGRDEVL--LDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQW  308 (322)
T ss_dssp             GSCCTTC--CCEEEEEETTSTT--HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCC--ChHhEEEcCcCcc--HHHHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHH
Confidence             122233  6999999999987  46889999999999999999999999998763      35789999999999886

>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*

Probab=99.84  E-value=9.7e-20  Score=192.17  Aligned_cols=253  Identities=13%  Similarity=0.067  Sum_probs=159.7

Q ss_pred             eEEEEEEcCCCcEEEEEEEe-CCCCC------------------CCCCCCccEEEEEcCCCCccccccccc-cchHHHHH
Q psy463          470 VEYMSVPIQPNMEAQVKLFL-PPGID------------------TSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNLYLA  529 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~-P~~~~------------------~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~~  529 (790)
                      .+.+++...+|  +...+|+ |....                  ....+++|+||++|||++......... ..+...++
T Consensus        64 ~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la  141 (365)
T 3ebl_A           64 SFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFV  141 (365)
T ss_dssp             EEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHHHH
T ss_pred             eeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHHHH
Confidence            45667777777  7777777 86520                  003457899999999986532122111 12344555


Q ss_pred             hcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC----CcCCC-ceEEEEechHHHHHHHHHhc
Q psy463          530 DNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP----YIDKT-RTAIWGWSYGGYATGLALAL  604 (790)
Q Consensus       530 ~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~----~~d~~-ri~i~G~S~GG~~a~~~a~~  604 (790)
                      .+.||+|+.+|||+++.....           ..++|+.++++|+.+ ..    .+|.+ ||+|+|+|+||++|+.++.+
T Consensus       142 ~~~g~~Vv~~dyR~~p~~~~~-----------~~~~D~~~a~~~l~~-~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~  209 (365)
T 3ebl_A          142 KLSKGVVVSVNYRRAPEHRYP-----------CAYDDGWTALKWVMS-QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVR  209 (365)
T ss_dssp             HHHTSEEEEECCCCTTTSCTT-----------HHHHHHHHHHHHHHH-CTTTEETTTTEEEEEEEEETHHHHHHHHHHHH
T ss_pred             HHCCCEEEEeeCCCCCCCCCc-----------HHHHHHHHHHHHHHh-CchhhhCCCCCCcEEEEeeCccHHHHHHHHHH
Confidence            545999999999987654322           447899999999986 33    47888 99999999999999999886


Q ss_pred             CCC--CceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHH
Q psy463          605 DPS--NVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMML  682 (790)
Q Consensus       605 ~p~--~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l  682 (790)
                      .+.  ..++++++.+|+.+.......... ....                                   ..........+
T Consensus       210 ~~~~~~~~~g~vl~~p~~~~~~~~~~~~~-~~~~-----------------------------------~~~~~~~~~~~  253 (365)
T 3ebl_A          210 AADEGVKVCGNILLNAMFGGTERTESERR-LDGK-----------------------------------YFVTLQDRDWY  253 (365)
T ss_dssp             HHHTTCCCCEEEEESCCCCCSSCCHHHHH-HTTT-----------------------------------SSCCHHHHHHH
T ss_pred             HHhcCCceeeEEEEccccCCCcCChhhhh-cCCC-----------------------------------cccCHHHHHHH
Confidence            543  368999999998765421110000 0000                                   00000111111


Q ss_pred             HHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh-hhhhcc---CCccEEEEecCCCcccchhhhHHHHHHHHhcCCce
Q psy463          683 AKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN-NKVDRI---RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF  758 (790)
Q Consensus       683 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i---~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~  758 (790)
                      ..........      ...+          ..++. .....+   .-.|+||+||+.|..+  ..+..++++|+++|+++
T Consensus       254 ~~~~~~~~~~------~~~~----------~~~p~~~~~~~l~~~~~pP~Li~~G~~D~l~--~~~~~~~~~L~~~g~~v  315 (365)
T 3ebl_A          254 WKAYLPEDAD------RDHP----------ACNPFGPNGRRLGGLPFAKSLIIVSGLDLTC--DRQLAYADALREDGHHV  315 (365)
T ss_dssp             HHHHSCTTCC------TTST----------TTCTTSTTCCCCTTSCCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCE
T ss_pred             HHHhCCCCCC------CCCc----------ccCCCCCcchhhccCCCCCEEEEEcCcccch--hHHHHHHHHHHHCCCCE
Confidence            1111000000      0000          00010 112233   1268999999999755  45689999999999999


Q ss_pred             EEEEcCCCCCcCCC-----cchHHHHHHHHHHHHhhC
Q psy463          759 QSQTYPDEEHGLIG-----VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       759 ~~~~~p~~~H~~~~-----~~~~~~~~i~~fl~~~l~  790 (790)
                      ++++|||++|.+..     ...++++.+.+||+++++
T Consensus       316 ~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~  352 (365)
T 3ebl_A          316 KVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLY  352 (365)
T ss_dssp             EEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC
T ss_pred             EEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhh
Confidence            99999999998862     667899999999999874

>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*

Probab=99.84  E-value=3.3e-20  Score=194.77  Aligned_cols=247  Identities=15%  Similarity=0.038  Sum_probs=164.4

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+++.+.+|.++.++++.|.+    ..++.|+||++||+++...   .+.  ... .++++||+|+++|+||++.++
T Consensus        67 ~~~~~~~~~~dg~~i~~~~~~P~~----~~~~~p~vv~~HG~g~~~~---~~~--~~~-~l~~~G~~v~~~d~rG~g~s~  136 (337)
T 1vlq_A           67 EAYDVTFSGYRGQRIKGWLLVPKL----EEEKLPCVVQYIGYNGGRG---FPH--DWL-FWPSMGYICFVMDTRGQGSGW  136 (337)
T ss_dssp             EEEEEEEECGGGCEEEEEEEEECC----SCSSEEEEEECCCTTCCCC---CGG--GGC-HHHHTTCEEEEECCTTCCCSS
T ss_pred             EEEEEEEEcCCCCEEEEEEEecCC----CCCCccEEEEEcCCCCCCC---Cch--hhc-chhhCCCEEEEecCCCCCCcc
Confidence            467788888899999999999975    2457899999999887632   111  122 334489999999999988543


Q ss_pred             hhhHhhh------hccCC---------------ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC
Q psy463          549 NTLKYAG------YRRLG---------------TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS  607 (790)
Q Consensus       549 ~~~~~~~------~~~~~---------------~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~  607 (790)
                      .......      ...+.               ...+.|+.++++++.+ .+.+|.++|+|+|||+||.+++.++..+| 
T Consensus       137 ~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~l~G~S~GG~la~~~a~~~p-  214 (337)
T 1vlq_A          137 LKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAAS-FPQVDQERIVIAGGSQGGGIALAVSALSK-  214 (337)
T ss_dssp             SCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHT-STTEEEEEEEEEEETHHHHHHHHHHHHCS-
T ss_pred             cCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEeCHHHHHHHHHHhcCC-
Confidence            2100000      00000               0347899999999988 67788899999999999999999999887 


Q ss_pred             CceEEEEEeCCCCC-cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHH
Q psy463          608 NVFKCGISVAPVTD-WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSL  686 (790)
Q Consensus       608 ~~~~~~v~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l  686 (790)
                       .++++++.+|... +....     .. ...      ..+...  .......                 ..........+
T Consensus       215 -~v~~~vl~~p~~~~~~~~~-----~~-~~~------~~~~~~--~~~~~~~-----------------~~~~~~~~~~~  262 (337)
T 1vlq_A          215 -KAKALLCDVPFLCHFRRAV-----QL-VDT------HPYAEI--TNFLKTH-----------------RDKEEIVFRTL  262 (337)
T ss_dssp             -SCCEEEEESCCSCCHHHHH-----HH-CCC------TTHHHH--HHHHHHC-----------------TTCHHHHHHHH
T ss_pred             -CccEEEECCCcccCHHHHH-----hc-CCC------cchHHH--HHHHHhC-----------------chhHHHHHHhh
Confidence             5888888888533 21100     00 000      000000  0000000                 00001111111


Q ss_pred             HhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCC
Q psy463          687 QHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDE  766 (790)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~  766 (790)
                                               ...++...++++ ++|+|+++|+.|..+|+.++..+++.++.   ++++.++|++
T Consensus       263 -------------------------~~~~~~~~~~~i-~~P~lii~G~~D~~~p~~~~~~~~~~l~~---~~~~~~~~~~  313 (337)
T 1vlq_A          263 -------------------------SYFDGVNFAARA-KIPALFSVGLMDNICPPSTVFAAYNYYAG---PKEIRIYPYN  313 (337)
T ss_dssp             -------------------------HTTCHHHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCCS---SEEEEEETTC
T ss_pred             -------------------------hhccHHHHHHHc-CCCEEEEeeCCCCCCCchhHHHHHHhcCC---CcEEEEcCCC
Confidence                                     112233667888 89999999999999999999999988864   4799999999


Q ss_pred             CCcCCCcchHHHHHHHHHHHHhhC
Q psy463          767 EHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       767 ~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      +|.+.  ..+..+.+.+||.++|+
T Consensus       314 gH~~~--~~~~~~~~~~fl~~~l~  335 (337)
T 1vlq_A          314 NHEGG--GSFQAVEQVKFLKKLFE  335 (337)
T ss_dssp             CTTTT--HHHHHHHHHHHHHHHHC
T ss_pred             CCCCc--chhhHHHHHHHHHHHHh
Confidence            99974  34667889999998874

>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}

Probab=99.84  E-value=1.1e-19  Score=178.30  Aligned_cols=210  Identities=16%  Similarity=0.121  Sum_probs=152.5

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+.+.++. +|.++.++++.|.+       +.|+||++||+++..   ..|........++++||.|+.+|++|.+.+..
T Consensus        12 ~~~~~~~~-~g~~l~~~~~~p~~-------~~p~vv~~hG~~~~~---~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~   80 (223)
T 2o2g_A           12 EYAVSVSV-GEVKLKGNLVIPNG-------ATGIVLFAHGSGSSR---YSPRNRYVAEVLQQAGLATLLIDLLTQEEEEI   80 (223)
T ss_dssp             EEEEEEEE-TTEEEEEEEECCTT-------CCEEEEEECCTTCCT---TCHHHHHHHHHHHHHTCEEEEECSSCHHHHHH
T ss_pred             eeEEEEec-CCeEEEEEEecCCC-------CceEEEEecCCCCCC---CccchHHHHHHHHHCCCEEEEEcCCCcCCCCc
Confidence            45677776 89999999998863       468999999988763   22222223344455799999999998654332


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY  629 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~  629 (790)
                      ..............+.|+.++++++.. .+.+|..+++++|||+||.+++.++.++|. .++++++.+|..++.      
T Consensus        81 ~~~~~~~~~~~~~~~~d~~~~i~~l~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-~v~~~v~~~~~~~~~------  152 (223)
T 2o2g_A           81 DLRTRHLRFDIGLLASRLVGATDWLTH-NPDTQHLKVGYFGASTGGGAALVAAAERPE-TVQAVVSRGGRPDLA------  152 (223)
T ss_dssp             HHHHCSSTTCHHHHHHHHHHHHHHHHH-CTTTTTSEEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCCGGGC------
T ss_pred             cchhhcccCcHHHHHHHHHHHHHHHHh-CcCCCCCcEEEEEeCccHHHHHHHHHhCCC-ceEEEEEeCCCCCcC------
Confidence            211100000111236788888888887 566888899999999999999999998875 799999988753210      


Q ss_pred             hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                                                                                    .                 
T Consensus       153 --------------------------------------------------------------~-----------------  153 (223)
T 2o2g_A          153 --------------------------------------------------------------P-----------------  153 (223)
T ss_dssp             --------------------------------------------------------------T-----------------
T ss_pred             --------------------------------------------------------------H-----------------
Confidence                                                                          0                 


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHH
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDS  787 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~  787 (790)
                              ..+.++ ++|+|+++|++|..+|...    .+.+.+.+.+++++++++++|.+..  ..+++.+.+.+||++
T Consensus       154 --------~~~~~~-~~P~l~i~g~~D~~~~~~~----~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~  220 (223)
T 2o2g_A          154 --------SALPHV-KAPTLLIVGGYDLPVIAMN----EDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFMH  220 (223)
T ss_dssp             --------TTGGGC-CSCEEEEEETTCHHHHHHH----HHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHH
T ss_pred             --------HHHhcC-CCCEEEEEccccCCCCHHH----HHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHH
Confidence                    234456 8999999999999987433    3444555677899999999999765  458899999999999


Q ss_pred             hhC
Q psy463          788 CFA  790 (790)
Q Consensus       788 ~l~  790 (790)
                      +|+
T Consensus       221 ~l~  223 (223)
T 2o2g_A          221 YLR  223 (223)
T ss_dssp             HCC
T ss_pred             hcC
Confidence            985

>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}

Probab=99.84  E-value=1.8e-19  Score=187.96  Aligned_cols=248  Identities=15%  Similarity=0.128  Sum_probs=162.9

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+++++.+| .+.+.+|.|.+.      ..|+||++||+++.......|. .+...++...||.|+.+|||+++++.
T Consensus        62 ~~~~~~~~~~~g-~i~~~~~~p~~~------~~p~vv~~HGgg~~~g~~~~~~-~~~~~la~~~g~~V~~~dyr~~p~~~  133 (326)
T 3ga7_A           62 TTRTCAVPTPYG-DVTTRLYSPQPT------SQATLYYLHGGGFILGNLDTHD-RIMRLLARYTGCTVIGIDYSLSPQAR  133 (326)
T ss_dssp             EEEEEEECCTTS-CEEEEEEESSSS------CSCEEEEECCSTTTSCCTTTTH-HHHHHHHHHHCSEEEEECCCCTTTSC
T ss_pred             ceEEEEeecCCC-CeEEEEEeCCCC------CCcEEEEECCCCcccCChhhhH-HHHHHHHHHcCCEEEEeeCCCCCCCC
Confidence            347788888888 899999999742      2399999999984322123332 23344444469999999999877654


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCCCC-----ceEEEEEeCCCCC
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDPSN-----VFKCGISVAPVTD  621 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p~~-----~~~~~v~~~~~~~  621 (790)
                      ..           ..++|+.++++|+.++..  .+|.+||+|+|+|+||++++.++.++++.     .++++++.+|+.+
T Consensus       134 ~~-----------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~  202 (326)
T 3ga7_A          134 YP-----------QAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYG  202 (326)
T ss_dssp             TT-----------HHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCS
T ss_pred             CC-----------cHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccc
Confidence            22           347899999999987421  36889999999999999999998876531     3889999998866


Q ss_pred             cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463          622 WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL  701 (790)
Q Consensus       622 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~  701 (790)
                      ......   ...++..                                 ...........+.+........         
T Consensus       203 ~~~~~~---~~~~~~~---------------------------------~~~l~~~~~~~~~~~~~~~~~~---------  237 (326)
T 3ga7_A          203 LQDSVS---RRLFGGA---------------------------------WDGLTREDLDMYEKAYLRNDED---------  237 (326)
T ss_dssp             CSCCHH---HHHCCCT---------------------------------TTTCCHHHHHHHHHHHCSSGGG---------
T ss_pred             cCCChh---HhhhcCC---------------------------------CCCCCHHHHHHHHHHhCCCCCc---------
Confidence            432100   0000000                                 0000000001111110000000         


Q ss_pred             CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cch
Q psy463          702 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRP  775 (790)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~  775 (790)
                           ....+ .......+.+. .+|+||+||+.|.++  .++..+++.|+++|+++++++|||++|.+..      ...
T Consensus       238 -----~~~~~-~~~~~~~~~~~-~~P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~  308 (326)
T 3ga7_A          238 -----RESPW-YCLFNNDLTRD-VPPCFIASAEFDPLI--DDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIAD  308 (326)
T ss_dssp             -----GGCTT-TSGGGSCCSSC-CCCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHH
T ss_pred             -----cCCcc-cCCCcchhhcC-CCCEEEEecCcCcCH--HHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHH
Confidence                 00000 00001223334 679999999999988  4889999999999999999999999999864      347


Q ss_pred             HHHHHHHHHHHHhh
Q psy463          776 HFYHTLERFLDSCF  789 (790)
Q Consensus       776 ~~~~~i~~fl~~~l  789 (790)
                      ++++.+.+||+++|
T Consensus       309 ~~~~~~~~fl~~~l  322 (326)
T 3ga7_A          309 DALQDGARFFMARM  322 (326)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            89999999999886

>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}

Probab=99.84  E-value=4.5e-20  Score=189.24  Aligned_cols=234  Identities=18%  Similarity=0.126  Sum_probs=162.6

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+.+.+.. +|.++.++++.|.        +.|+||++||+++..   ..|.  .....++++||.|+++|+||++.+..
T Consensus         6 ~~~~~~~~-~g~~l~~~~~~p~--------~~p~vv~~HG~~~~~---~~~~--~~~~~l~~~g~~v~~~d~~G~g~s~~   71 (290)
T 3ksr_A            6 LSSIEIPV-GQDELSGTLLTPT--------GMPGVLFVHGWGGSQ---HHSL--VRAREAVGLGCICMTFDLRGHEGYAS   71 (290)
T ss_dssp             EEEEEEEE-TTEEEEEEEEEEE--------SEEEEEEECCTTCCT---TTTH--HHHHHHHTTTCEEECCCCTTSGGGGG
T ss_pred             eeeEEecC-CCeEEEEEEecCC--------CCcEEEEeCCCCCCc---CcHH--HHHHHHHHCCCEEEEeecCCCCCCCC
Confidence            34566666 7899999999874        569999999998763   2232  22344555799999999999876554


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY  629 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~  629 (790)
                      ......    ....++|+.++++++.+ .+.+|..+|+|+||||||.+++.++.++|   ++++++.+|.......    
T Consensus        72 ~~~~~~----~~~~~~d~~~~i~~l~~-~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~---~~~~~l~~p~~~~~~~----  139 (290)
T 3ksr_A           72 MRQSVT----RAQNLDDIKAAYDQLAS-LPYVDAHSIAVVGLSYGGYLSALLTRERP---VEWLALRSPALYKDAH----  139 (290)
T ss_dssp             GTTTCB----HHHHHHHHHHHHHHHHT-STTEEEEEEEEEEETHHHHHHHHHTTTSC---CSEEEEESCCCCCSSC----
T ss_pred             Cccccc----HHHHHHHHHHHHHHHHh-cCCCCccceEEEEEchHHHHHHHHHHhCC---CCEEEEeCcchhhhhh----
Confidence            321111    11346899999999987 56678889999999999999999999876   5666777776432210    


Q ss_pred             hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                                +..+......  .....                                        .|....      .
T Consensus       140 ----------~~~~~~~~~~--~~~~~----------------------------------------~~~~~~------~  161 (290)
T 3ksr_A          140 ----------WDQPKVSLNA--DPDLM----------------------------------------DYRRRA------L  161 (290)
T ss_dssp             ----------TTSBHHHHHH--STTHH----------------------------------------HHTTSC------C
T ss_pred             ----------hhcccccccC--Chhhh----------------------------------------hhhhhh------h
Confidence                      0000000000  00000                                        000000      0


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHH
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDS  787 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~  787 (790)
                      .+........+.++ ++|+|++||+.|..+++..+..+++.++..+ ++++.++|+++|.+..  ..+.+.+.+.+||++
T Consensus       162 ~~~~~~~~~~~~~~-~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~  239 (290)
T 3ksr_A          162 APGDNLALAACAQY-KGDVLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVIAGADHALSVKEHQQEYTRALIDWLTE  239 (290)
T ss_dssp             CGGGCHHHHHHHHC-CSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred             hhccccHHHHHHhc-CCCeEEEEecCCcccChHHHHHHHHHhccCC-CceEEEcCCCCCCCCcchHHHHHHHHHHHHHHH
Confidence            11122233567788 9999999999999999999999999998776 6889999999998875  678899999999998


Q ss_pred             hh
Q psy463          788 CF  789 (790)
Q Consensus       788 ~l  789 (790)
                      ++
T Consensus       240 ~~  241 (290)
T 3ksr_A          240 MV  241 (290)
T ss_dssp             HH
T ss_pred             Hh
Confidence            75

>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A

Probab=99.83  E-value=2.7e-20  Score=192.10  Aligned_cols=219  Identities=13%  Similarity=0.023  Sum_probs=148.1

Q ss_pred             CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccC
Q psy463          480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRL  559 (790)
Q Consensus       480 g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~  559 (790)
                      +..+...+|.|.+    ..++.|+||++|||++.......+.  .....++++||.|+++|+|+++.....         
T Consensus        65 ~~~~~~~~~~p~~----~~~~~p~vv~~HGgg~~~~~~~~~~--~~~~~l~~~G~~v~~~d~r~~~~~~~~---------  129 (303)
T 4e15_A           65 EGRQLVDVFYSEK----TTNQAPLFVFVHGGYWQEMDMSMSC--SIVGPLVRRGYRVAVMDYNLCPQVTLE---------  129 (303)
T ss_dssp             STTCEEEEEECTT----CCTTCCEEEEECCSTTTSCCGGGSC--TTHHHHHHTTCEEEEECCCCTTTSCHH---------
T ss_pred             CCCcEEEEEecCC----CCCCCCEEEEECCCcCcCCChhHHH--HHHHHHHhCCCEEEEecCCCCCCCChh---------
Confidence            4455667778864    3467899999999875432122222  233444458999999999998765432         


Q ss_pred             CccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC------ceEEEEEeCCCCCcccccc---cch
Q psy463          560 GTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN------VFKCGISVAPVTDWIYYDT---IYS  630 (790)
Q Consensus       560 ~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~------~~~~~v~~~~~~~~~~~~~---~~~  630 (790)
                        ..+.|+.++++++.++....+.++|+|+||||||++++.++.+.+..      .++++++.+|+.++.....   .+.
T Consensus       130 --~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~~~~~  207 (303)
T 4e15_A          130 --QLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLESVNP  207 (303)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCTTTSG
T ss_pred             --HHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhcccccch
Confidence              34788888999987632335578999999999999999999865432      7999999999887643211   111


Q ss_pred             hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463          631 ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG  710 (790)
Q Consensus       631 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  710 (790)
                      ...++..     ...+                                                                
T Consensus       208 ~~~~~~~-----~~~~----------------------------------------------------------------  218 (303)
T 4e15_A          208 KNILGLN-----ERNI----------------------------------------------------------------  218 (303)
T ss_dssp             GGTTCCC-----TTTT----------------------------------------------------------------
T ss_pred             hhhhcCC-----HHHH----------------------------------------------------------------
Confidence            1111110     0000                                                                


Q ss_pred             hhhhhhh-hhh----hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHH
Q psy463          711 YKIAALN-NKV----DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERF  784 (790)
Q Consensus       711 ~~~~~~~-~~~----~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~f  784 (790)
                       ...++. ..+    .++ .+|+|++||++|..+++.++..+++.|+++|.+++++++|+++|+... ........+.+|
T Consensus       219 -~~~sp~~~~~~~~~~~~-~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~  296 (303)
T 4e15_A          219 -ESVSPMLWEYTDVTVWN-STKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRF  296 (303)
T ss_dssp             -TTTCGGGCCCCCGGGGT-TSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHHH
T ss_pred             -HHcCchhhcccccccCC-CCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHHH
Confidence             000111 111    234 799999999999999999999999999999999999999999995543 333334445555


Q ss_pred             HH
Q psy463          785 LD  786 (790)
Q Consensus       785 l~  786 (790)
                      |.
T Consensus       297 l~  298 (303)
T 4e15_A          297 LR  298 (303)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}

Probab=99.83  E-value=4.7e-20  Score=188.40  Aligned_cols=236  Identities=14%  Similarity=0.079  Sum_probs=158.9

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCC-CCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGID-TSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~-~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      +.+.+.+...+|..+...+| |.... ....++.|+||++||++........|  ......++++||.|+++|+||++.+
T Consensus        18 ~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~--~~~~~~l~~~G~~v~~~d~~g~~~~   94 (283)
T 3bjr_A           18 QGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQA--ESLAMAFAGHGYQAFYLEYTLLTDQ   94 (283)
T ss_dssp             CSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHH--HHHHHHHHTTTCEEEEEECCCTTTC
T ss_pred             CCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCcccc--HHHHHHHHhCCcEEEEEeccCCCcc
Confidence            44567777778888888888 76410 00235789999999976432111112  2233445568999999999997764


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCCCC------------ceEEE
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDPSN------------VFKCG  613 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p~~------------~~~~~  613 (790)
                      +..+         .....|+.++++++.+...  .+|..+|+|+||||||.+++.++.++|..            .++++
T Consensus        95 ~~~~---------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~  165 (283)
T 3bjr_A           95 QPLG---------LAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNV  165 (283)
T ss_dssp             SSCB---------THHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSE
T ss_pred             ccCc---------hhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEE
Confidence            2011         1346788888888876211  26677999999999999999999988751            27788


Q ss_pred             EEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcch
Q psy463          614 ISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF  693 (790)
Q Consensus       614 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~  693 (790)
                      ++.+|+.+....   +..          ....+.         .+                                   
T Consensus       166 v~~~p~~~~~~~---~~~----------~~~~~~---------~~-----------------------------------  188 (283)
T 3bjr_A          166 VLGYPVISPLLG---FPK----------DDATLA---------TW-----------------------------------  188 (283)
T ss_dssp             EEESCCCCTTSB---C---------------------------CC-----------------------------------
T ss_pred             EEcCCccccccc---ccc----------ccchHH---------HH-----------------------------------
Confidence            888887653210   000          000000         00                                   


Q ss_pred             hcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-
Q psy463          694 QSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-  772 (790)
Q Consensus       694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-  772 (790)
                           .         ..+...++...+.++ .+|+|++||++|..+|++++..+++.++..+.+++++++++++|.+.. 
T Consensus       189 -----~---------~~~~~~~~~~~~~~~-~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~  253 (283)
T 3bjr_A          189 -----T---------PTPNELAADQHVNSD-NQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLALA  253 (283)
T ss_dssp             -----C---------CCGGGGCGGGSCCTT-CCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHHH
T ss_pred             -----H---------HHhHhcCHHHhccCC-CCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCcccccc
Confidence                 0         001111222445667 899999999999999999999999999999999999999999997764 


Q ss_pred             c-------------chHHHHHHHHHHHHh
Q psy463          773 V-------------RPHFYHTLERFLDSC  788 (790)
Q Consensus       773 ~-------------~~~~~~~i~~fl~~~  788 (790)
                      .             ..++.+.+.+||+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~i~~fl~~~  282 (283)
T 3bjr_A          254 NAQTAWKPDANQPHVAHWLTLALEWLADN  282 (283)
T ss_dssp             HHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred             cccccccccccchhHHHHHHHHHHHHhhc
Confidence            2             268889999999864

>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*

Probab=99.83  E-value=2.9e-19  Score=181.87  Aligned_cols=231  Identities=13%  Similarity=0.111  Sum_probs=153.4

Q ss_pred             EEEEEcCCCcEEEEEEEeCCCC---CCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          472 YMSVPIQPNMEAQVKLFLPPGI---DTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       472 ~~~~~~~dg~~i~~~~~~P~~~---~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      .+.+. .+|..+.+.++.|...   .  ..++.|+||++||++........|.  .....++++||.|+++|+||++..+
T Consensus         6 ~~~~~-~~~~~~~~~~~~p~~~~~~~--~~~~~p~vv~~HGgg~~~~~~~~~~--~~~~~l~~~G~~v~~~d~~g~g~~~   80 (277)
T 3bxp_A            6 QRTLN-TAAHPFQITAYWLDQISDFE--TAVDYPIMIICPGGGFTYHSGREEA--PIATRMMAAGMHTVVLNYQLIVGDQ   80 (277)
T ss_dssp             EEEEC-STTCCEEEEEEEECCCCSSS--CCCCEEEEEEECCSTTTSCCCTTHH--HHHHHHHHTTCEEEEEECCCSTTTC
T ss_pred             EEEec-cCCCcceEEEEeCCcccccc--cCCCccEEEEECCCccccCCCccch--HHHHHHHHCCCEEEEEecccCCCCC
Confidence            34443 4778899999999731   2  3467899999999764322122222  2233444589999999999965222


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCC-------------CCceEEE
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDP-------------SNVFKCG  613 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p-------------~~~~~~~  613 (790)
                      ..+         ...+.|+.++++++.++..  .+|.++|+|+|||+||.+++.++.+++             ...++++
T Consensus        81 ~~~---------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~  151 (277)
T 3bxp_A           81 SVY---------PWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAI  151 (277)
T ss_dssp             CCT---------THHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEE
T ss_pred             ccC---------chHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEE
Confidence            111         1347788888888876311  266789999999999999999998752             3478999


Q ss_pred             EEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcch
Q psy463          614 ISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF  693 (790)
Q Consensus       614 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~  693 (790)
                      ++.+|+.++...          ..   . ...+..        .+.                              +   
T Consensus       152 v~~~p~~~~~~~----------~~---~-~~~~~~--------~~~------------------------------~---  176 (277)
T 3bxp_A          152 ILGYPVIDLTAG----------FP---T-TSAARN--------QIT------------------------------T---  176 (277)
T ss_dssp             EEESCCCBTTSS----------SS---S-SHHHHH--------HHC------------------------------S---
T ss_pred             EEeCCcccCCCC----------CC---C-ccccch--------hcc------------------------------c---
Confidence            999997653210          00   0 000000        000                              0   


Q ss_pred             hcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-
Q psy463          694 QSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-  772 (790)
Q Consensus       694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-  772 (790)
                                      .....++...+.++ .+|+|++||++|..+|++++..+++.+++.+.+++++++++++|.+.. 
T Consensus       177 ----------------~~~~~~~~~~~~~~-~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~  239 (277)
T 3bxp_A          177 ----------------DARLWAAQRLVTPA-SKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALA  239 (277)
T ss_dssp             ----------------CGGGSBGGGGCCTT-SCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC-------
T ss_pred             ----------------hhhhcCHhhccccC-CCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccc
Confidence                            00111222445556 789999999999999999999999999999999999999999997754 


Q ss_pred             c---------------chHHHHHHHHHHHHh
Q psy463          773 V---------------RPHFYHTLERFLDSC  788 (790)
Q Consensus       773 ~---------------~~~~~~~i~~fl~~~  788 (790)
                      .               ..++++.+.+||+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~  270 (277)
T 3bxp_A          240 NHVTQKPGKDKYLNDQAAIWPQLALRWLQEQ  270 (277)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccCccccccccchHHHHHHHHHHHHHhc
Confidence            2               367889999999875

>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}

Probab=99.83  E-value=1.9e-19  Score=174.57  Aligned_cols=203  Identities=18%  Similarity=0.171  Sum_probs=148.3

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+.+...+| ++.++++.|.+     .++.|+||++||++.................++++||.|+.+|++|++.+.
T Consensus         5 ~~~~~~~~~~~g-~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~   78 (208)
T 3trd_A            5 TNEDFLIQGPVG-QLEVMITRPKG-----IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQ   78 (208)
T ss_dssp             SSSCEEEECSSS-EEEEEEECCSS-----CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCC
T ss_pred             ccceEEEECCCc-eEEEEEEcCCC-----CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence            356678888899 99999998863     346799999999642211111111122334455589999999999987654


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~  628 (790)
                      ..+      .......+|+.++++++.++   .+..+++++|||+||.+++.++ .+|  .++++++.+|..+...    
T Consensus        79 ~~~------~~~~~~~~d~~~~~~~l~~~---~~~~~i~l~G~S~Gg~~a~~~a-~~~--~v~~~v~~~~~~~~~~----  142 (208)
T 3trd_A           79 GRY------DNGVGEVEDLKAVLRWVEHH---WSQDDIWLAGFSFGAYISAKVA-YDQ--KVAQLISVAPPVFYEG----  142 (208)
T ss_dssp             SCC------CTTTHHHHHHHHHHHHHHHH---CTTCEEEEEEETHHHHHHHHHH-HHS--CCSEEEEESCCTTSGG----
T ss_pred             CCc------cchHHHHHHHHHHHHHHHHh---CCCCeEEEEEeCHHHHHHHHHh-ccC--CccEEEEeccccccCC----
Confidence            331      11224578999999999884   3458999999999999999999 566  7888888887542100    


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                                       +                                                              
T Consensus       143 -----------------~--------------------------------------------------------------  143 (208)
T 3trd_A          143 -----------------F--------------------------------------------------------------  143 (208)
T ss_dssp             -----------------G--------------------------------------------------------------
T ss_pred             -----------------c--------------------------------------------------------------
Confidence                             0                                                              


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHH
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFL  785 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl  785 (790)
                               ..+..+ ++|+|+++|++|..+|++.+..+++.+...   ++++++++++|.+....+++.+.+.+||
T Consensus       144 ---------~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~~~~~~~~~i~~fl  207 (208)
T 3trd_A          144 ---------ASLTQM-ASPWLIVQGDQDEVVPFEQVKAFVNQISSP---VEFVVMSGASHFFHGRLIELRELLVRNL  207 (208)
T ss_dssp             ---------TTCCSC-CSCEEEEEETTCSSSCHHHHHHHHHHSSSC---CEEEEETTCCSSCTTCHHHHHHHHHHHH
T ss_pred             ---------hhhhhc-CCCEEEEECCCCCCCCHHHHHHHHHHccCc---eEEEEeCCCCCcccccHHHHHHHHHHHh
Confidence                     112234 799999999999999999999988877653   6999999999998875577778888776

>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*

Probab=99.83  E-value=9e-20  Score=180.69  Aligned_cols=208  Identities=14%  Similarity=0.074  Sum_probs=152.0

Q ss_pred             EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH
Q psy463          473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK  552 (790)
Q Consensus       473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~  552 (790)
                      +++.+.+|..+.++++.|.      .++.|+||++||..+..   ..|.  .....++++||.|+++|+||++.++....
T Consensus         6 ~~~~~~~g~~l~~~~~~p~------~~~~p~vv~~hG~~~~~---~~~~--~~~~~l~~~g~~v~~~d~~g~g~s~~~~~   74 (236)
T 1zi8_A            6 ISIQSYDGHTFGALVGSPA------KAPAPVIVIAQDIFGVN---AFMR--ETVSWLVDQGYAAVCPDLYARQAPGTALD   74 (236)
T ss_dssp             CCEECTTSCEECEEEECCS------SCSEEEEEEECCTTBSC---HHHH--HHHHHHHHTTCEEEEECGGGGTSTTCBCC
T ss_pred             EEEecCCCCeEEEEEECCC------CCCCCEEEEEcCCCCCC---HHHH--HHHHHHHhCCcEEEeccccccCCCccccc
Confidence            4566779999999999885      24679999999987762   2222  23334455799999999998776542110


Q ss_pred             hh-----------hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          553 YA-----------GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       553 ~~-----------~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      ..           .........+.|+.++++++.+ ...++ .+++|+|||+||.+++.++.++|   ++++++.+|...
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~-~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~---~~~~v~~~~~~~  149 (236)
T 1zi8_A           75 PQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARH-QPYSN-GKVGLVGYSLGGALAFLVASKGY---VDRAVGYYGVGL  149 (236)
T ss_dssp             TTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTS-STTEE-EEEEEEEETHHHHHHHHHHHHTC---SSEEEEESCSSG
T ss_pred             ccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHh-ccCCC-CCEEEEEECcCHHHHHHHhccCC---ccEEEEecCccc
Confidence            00           0001111346788888888876 33334 69999999999999999999876   677776665311


Q ss_pred             cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463          622 WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL  701 (790)
Q Consensus       622 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~  701 (790)
                      .                                                                   ..          
T Consensus       150 ~-------------------------------------------------------------------~~----------  152 (236)
T 1zi8_A          150 E-------------------------------------------------------------------KQ----------  152 (236)
T ss_dssp             G-------------------------------------------------------------------GC----------
T ss_pred             c-------------------------------------------------------------------cc----------
Confidence            0                                                                   00          


Q ss_pred             CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-c-------
Q psy463          702 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-V-------  773 (790)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~-------  773 (790)
                                     ...+.++ ++|+|+++|+.|..+|++.+..+++.+++.+ +++++++++++|.+.. .       
T Consensus       153 ---------------~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~  215 (236)
T 1zi8_A          153 ---------------LNKVPEV-KHPALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVHWYEEAGHSFARTGSSGYVAS  215 (236)
T ss_dssp             ---------------GGGGGGC-CSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEEEETTCCTTTTCTTSTTCCHH
T ss_pred             ---------------hhhhhhc-CCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEEEECCCCcccccCCCCccCHH
Confidence                           0345567 8999999999999999999999999998765 7899999999998875 2       


Q ss_pred             -chHHHHHHHHHHHHhhC
Q psy463          774 -RPHFYHTLERFLDSCFA  790 (790)
Q Consensus       774 -~~~~~~~i~~fl~~~l~  790 (790)
                       .+++.+.+.+||+++|+
T Consensus       216 ~~~~~~~~i~~fl~~~l~  233 (236)
T 1zi8_A          216 AAALANERTLDFLVPLQS  233 (236)
T ss_dssp             HHHHHHHHHHHHHGGGCC
T ss_pred             HHHHHHHHHHHHHHHhcC
Confidence             24788999999999874

>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}

Probab=99.83  E-value=1e-19  Score=188.53  Aligned_cols=246  Identities=15%  Similarity=0.133  Sum_probs=165.6

Q ss_pred             CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       468 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ...+.+++...+|..+.+.+|.|.+      ++.|+||++|||+........+. .+...++.+.||.|+.+|||+++++
T Consensus        58 ~~~~~~~i~~~~G~~i~~~~~~P~~------~~~p~vv~~HGgG~~~g~~~~~~-~~~~~la~~~g~~vv~~dyr~~p~~  130 (317)
T 3qh4_A           58 VAVADDVVTGEAGRPVPVRIYRAAP------TPAPVVVYCHAGGFALGNLDTDH-RQCLELARRARCAVVSVDYRLAPEH  130 (317)
T ss_dssp             CEEEEEEEECTTSCEEEEEEEECSC------SSEEEEEEECCSTTTSCCTTTTH-HHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred             ceEEEEEecCCCCCeEEEEEEecCC------CCCcEEEEECCCcCccCChHHHH-HHHHHHHHHcCCEEEEecCCCCCCC
Confidence            3567788999899999999999963      56799999999875422122222 3455566556999999999987764


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHhC--CCcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENL--PYIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDW  622 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~  622 (790)
                      ...           ..++|+.++++|+.++.  ..+|.+||+|+|+|+||++++.++.+.++   ..++++++.+|+.+.
T Consensus       131 ~~p-----------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~  199 (317)
T 3qh4_A          131 PYP-----------AALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDD  199 (317)
T ss_dssp             CTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCS
T ss_pred             CCc-----------hHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecC
Confidence            432           44789999999998731  23788899999999999999998876543   258899999998775


Q ss_pred             ccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          623 IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       623 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                      ..  ......+...+                                   .........+..........        .+
T Consensus       200 ~~--~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~--------~~  234 (317)
T 3qh4_A          200 RP--TASRSEFRATP-----------------------------------AFDGEAASLMWRHYLAGQTP--------SP  234 (317)
T ss_dssp             SC--CHHHHHTTTCS-----------------------------------SSCHHHHHHHHHHHHTTCCC--------CT
T ss_pred             CC--CcCHHHhcCCC-----------------------------------CcCHHHHHHHHHHhcCCCCC--------Cc
Confidence            41  00000000000                                   00000011111111100000        00


Q ss_pred             CcCCcchhhhhhhh--hhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cc
Q psy463          703 TFEDNLEGYKIAAL--NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VR  774 (790)
Q Consensus       703 ~~~~~~~~~~~~~~--~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~  774 (790)
                                ..++  ...+..+  .|+||+||+.|..++  ++..+++.|+++|+++++++||+++|.+..      ..
T Consensus       235 ----------~~~p~~~~~l~~l--pP~li~~G~~D~~~~--~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~  300 (317)
T 3qh4_A          235 ----------ESVPGRRGQLAGL--PATLITCGEIDPFRD--EVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTS  300 (317)
T ss_dssp             ----------TTCGGGCSCCTTC--CCEEEEEEEESTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHH
T ss_pred             ----------ccCCCcccccCCC--CceeEEecCcCCCch--hHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHH
Confidence                      0000  0112222  599999999999875  788999999999999999999999998652      55


Q ss_pred             hHHHHHHHHHHHHhhC
Q psy463          775 PHFYHTLERFLDSCFA  790 (790)
Q Consensus       775 ~~~~~~i~~fl~~~l~  790 (790)
                      .++++.+.+||+++|.
T Consensus       301 ~~~~~~~~~~l~~~l~  316 (317)
T 3qh4_A          301 QRLFAMQGHALADAFY  316 (317)
T ss_dssp             HHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            7899999999999874

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.83  E-value=6.7e-19  Score=213.27  Aligned_cols=346  Identities=9%  Similarity=0.009  Sum_probs=216.5

Q ss_pred             CceeEeCCCCCceEEEEec---CCceeEEEecccCCCCCCCcCCCccccCCCCcc---------ccccCCCcceeEeeee
Q psy463           10 SSALWFSPSGNNLAYASFD---DNRTVIMTIPFYGNPGHPSSQYTQAINLREPVL---------SRVNWANESVVAAWVN   77 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~w~~~~~~~~~~~   77 (790)
                      ..+++|||||++|||++.+   ++...+|+++..|++         ..+++.+..         ..+.|++|++ +.+..
T Consensus        55 v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~---------~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~  124 (1045)
T 1k32_A           55 INNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE---------IKRITYFSGKSTGRRMFTDVAGFDPDGN-LIIST  124 (1045)
T ss_dssp             EEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE---------EEECCCCCEEEETTEECSEEEEECTTCC-EEEEE
T ss_pred             ccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC---------eEEcccCCCcccccccccccccCCCCCE-EEEEE
Confidence            4789999999999999987   677899999998885         344444332         4578999988 44443


Q ss_pred             ccc----ceeEEEEeeCCCCeeeEEEeecC------------------CC------------Ccc--------------c
Q psy463           78 RVQ----NRARITRCSINEGTCDVVFSRDL------------------DR------------GWF--------------E  109 (790)
Q Consensus        78 r~~----~~~~~~~~~~~~~~~~~~~~~~~------------------~~------------~~~--------------~  109 (790)
                      ...    ....+..++..++.++.+.....                  ..            .|+              .
T Consensus       125 ~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~  204 (1045)
T 1k32_A          125 DAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMST  204 (1045)
T ss_dssp             CTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSS
T ss_pred             CCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCC
Confidence            321    23445555555555443221100                  00            011              0


Q ss_pred             cCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEe
Q psy463          110 PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILS  189 (790)
Q Consensus       110 ~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~  189 (790)
                      ....|+|++|  .++|++..++          ..+||.++.+++.      ..+++.+.. + ....|+++++. ++|.+
T Consensus       205 ~v~~~~~s~d--~l~~~~~~dg----------~~~l~~~~~~g~~------~~~l~~~~~-~-~~~~~SpDG~~-la~~~  263 (1045)
T 1k32_A          205 HVSSPVIVGH--RIYFITDIDG----------FGQIYSTDLDGKD------LRKHTSFTD-Y-YPRHLNTDGRR-ILFSK  263 (1045)
T ss_dssp             CCEEEEEETT--EEEEEECTTS----------SCEEEEEETTSCS------CEECCCCCS-S-CEEEEEESSSC-EEEEE
T ss_pred             cccceEEeCC--EEEEEEeccC----------ceEEEEEeCCCCc------ceEecCCCC-c-ceeeEcCCCCE-EEEEe
Confidence            1124678777  6777765432          2389999987653      455555432 1 22377777664 55543


Q ss_pred             cccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEc-cCCcEEEEEeccC
Q psy463          190 HNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWA-NESVVAAWVNRVQ  268 (790)
Q Consensus       190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ws-pDg~~~~~~~r~~  268 (790)
                      .             ..||++++++++.      ..+.. +.... ...|.    .....+..+.|| |||+.+++..++ 
T Consensus       264 ~-------------~~i~~~d~~~~~l------~~l~~-~~~~~-~~~~~----~~~~~v~~~~~S~pdG~~la~~~~~-  317 (1045)
T 1k32_A          264 G-------------GSIYIFNPDTEKI------EKIEI-GDLES-PEDRI----ISIPSKFAEDFSPLDGDLIAFVSRG-  317 (1045)
T ss_dssp             T-------------TEEEEECTTTCCE------EECCC-CCCCB-CCSEE----EECGGGGEEEEEECGGGCEEEEETT-
T ss_pred             C-------------CEEEEecCCceEe------eeecc-Ccccc-ccccc----ccccccceeeecCCCCCEEEEEEcC-
Confidence            2             6899998844321      12220 00000 00000    011235689999 999955555433 


Q ss_pred             cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEE-EEEcCCCCcccCC
Q psy463          269 NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLT-FIDLDDQAGIKDK  347 (790)
Q Consensus       269 ~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~-~~d~~~~~~~~~~  347 (790)
                         .|+++++.+++...+....   .  .....+.|| ||+.|++ .+   + +        .+|+ ++++++++     
T Consensus       318 ---~i~~~~~~~~~~~~~~~~~---~--~~~~~~~~s-dg~~l~~-~s---~-~--------~~l~~~~d~~~~~-----  370 (1045)
T 1k32_A          318 ---QAFIQDVSGTYVLKVPEPL---R--IRYVRRGGD-TKVAFIH-GT---R-E--------GDFLGIYDYRTGK-----  370 (1045)
T ss_dssp             ---EEEEECTTSSBEEECSCCS---C--EEEEEECSS-SEEEEEE-EE---T-T--------EEEEEEEETTTCC-----
T ss_pred             ---EEEEEcCCCCceEEccCCC---c--ceEEeeeEc-CCCeEEE-EE---C-C--------CceEEEEECCCCC-----
Confidence               4999999888766543211   1  013478999 9999984 44   2 2        3799 99998887     


Q ss_pred             CcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEE
Q psy463          348 VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYY  427 (790)
Q Consensus       348 ~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~  427 (790)
                       .+.|+.....+.. ++|||||+.|++.+.+     ..|+++++.+  ++.+.+...      ....+..++|||||+++
T Consensus       371 -~~~l~~~~~~~~~-~~~SpDG~~la~~~~~-----~~v~~~d~~t--g~~~~~~~~------~~~~v~~~~~SpDG~~l  435 (1045)
T 1k32_A          371 -AEKFEENLGNVFA-MGVDRNGKFAVVANDR-----FEIMTVDLET--GKPTVIERS------REAMITDFTISDNSRFI  435 (1045)
T ss_dssp             -EEECCCCCCSEEE-EEECTTSSEEEEEETT-----SEEEEEETTT--CCEEEEEEC------SSSCCCCEEECTTSCEE
T ss_pred             -ceEecCCccceee-eEECCCCCEEEEECCC-----CeEEEEECCC--CceEEeccC------CCCCccceEECCCCCeE
Confidence             7777744344444 8999999999998776     4788999987  666666532      34456678999999999


Q ss_pred             EEEeecC-------CCCeEEEEecCCCeEEEecc
Q psy463          428 VLSCIGP-------GIPEIMLFDKTGQRLLYWDT  454 (790)
Q Consensus       428 ~~~~~~~-------~~~~i~~~~~~~~~~~~l~~  454 (790)
                      ++.....       ....|+++|+++++...++.
T Consensus       436 a~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~  469 (1045)
T 1k32_A          436 AYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT  469 (1045)
T ss_dssp             EEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC
T ss_pred             EEEecCccccccCCCCCeEEEEECCCCcEEEeeC
Confidence            8886643       25689999998877665543

>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*

Probab=99.82  E-value=2e-19  Score=182.16  Aligned_cols=246  Identities=15%  Similarity=0.122  Sum_probs=158.9

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+.+.. +|.++.++++.|.+      .+.|+||++||.++...  ..+ .......++++||.|+++|+||+|.+.
T Consensus        21 ~~~~~~~~~-~g~~l~~~~~~p~~------~~~p~vv~~HG~~~~~~--~~~-~~~~~~~l~~~G~~v~~~d~~G~G~s~   90 (270)
T 3pfb_A           21 GMATITLER-DGLQLVGTREEPFG------EIYDMAIIFHGFTANRN--TSL-LREIANSLRDENIASVRFDFNGHGDSD   90 (270)
T ss_dssp             EEEEEEEEE-TTEEEEEEEEECSS------SSEEEEEEECCTTCCTT--CHH-HHHHHHHHHHTTCEEEEECCTTSTTSS
T ss_pred             cceEEEecc-CCEEEEEEEEcCCC------CCCCEEEEEcCCCCCcc--ccH-HHHHHHHHHhCCcEEEEEccccccCCC
Confidence            455556655 89999999998853      45799999999887621  111 122233445589999999999987655


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~  628 (790)
                      ........    ...++|+.++++++.++   .+..+++|+|||+||.+++.++.++|. .++++++.+|........  
T Consensus        91 ~~~~~~~~----~~~~~d~~~~i~~l~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~v~~~v~~~~~~~~~~~~--  160 (270)
T 3pfb_A           91 GKFENMTV----LNEIEDANAILNYVKTD---PHVRNIYLVGHAQGGVVASMLAGLYPD-LIKKVVLLAPAATLKGDA--  160 (270)
T ss_dssp             SCGGGCCH----HHHHHHHHHHHHHHHTC---TTEEEEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCCTHHHHHH--
T ss_pred             CCCCccCH----HHHHHhHHHHHHHHHhC---cCCCeEEEEEeCchhHHHHHHHHhCch-hhcEEEEeccccccchhh--
Confidence            43211110    13367888888888762   223599999999999999999998885 899999999876543100  


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                      .........   ..+...              ...+..   ..    ......+...+...                   
T Consensus       161 ~~~~~~~~~---~~~~~~--------------~~~~~~---~~----~~~~~~~~~~~~~~-------------------  197 (270)
T 3pfb_A          161 LEGNTQGVT---YNPDHI--------------PDRLPF---KD----LTLGGFYLRIAQQL-------------------  197 (270)
T ss_dssp             HHTEETTEE---CCTTSC--------------CSEEEE---TT----EEEEHHHHHHHHHC-------------------
T ss_pred             hhhhhhccc---cCcccc--------------cccccc---cc----cccchhHhhccccc-------------------
Confidence            000000000   000000              000000   00    00001111112211                   


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                            .+...+.++ ++|+|+++|++|..+|++.+..+.+.++    .++++++++++|.+.. .++++.+.+.+||++
T Consensus       198 ------~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~  266 (270)
T 3pfb_A          198 ------PIYEVSAQF-TKPVCLIHGTDDTVVSPNASKKYDQIYQ----NSTLHLIEGADHCFSDSYQKNAVNLTTDFLQN  266 (270)
T ss_dssp             ------CHHHHHTTC-CSCEEEEEETTCSSSCTHHHHHHHHHCS----SEEEEEETTCCTTCCTHHHHHHHHHHHHHHC-
T ss_pred             ------CHHHHHhhC-CccEEEEEcCCCCCCCHHHHHHHHHhCC----CCeEEEcCCCCcccCccchHHHHHHHHHHHhh
Confidence                  222567788 9999999999999999999988887754    3599999999999987 789999999999986


Q ss_pred             h
Q psy463          788 C  788 (790)
Q Consensus       788 ~  788 (790)
                      +
T Consensus       267 ~  267 (270)
T 3pfb_A          267 N  267 (270)
T ss_dssp             -
T ss_pred             c
Confidence            5

>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}

Probab=99.82  E-value=2.5e-19  Score=188.73  Aligned_cols=249  Identities=18%  Similarity=0.184  Sum_probs=164.7

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+++...+|.++.++++.|.+     .++.|+||++||+++..   ..|..  ...++ ++||.|+++|+||.|.++
T Consensus        81 ~~~~~~~~~~~g~~l~~~~~~P~~-----~~~~p~vv~~HG~g~~~---~~~~~--~~~~~-~~G~~v~~~D~rG~g~s~  149 (346)
T 3fcy_A           81 ECYDLYFTGVRGARIHAKYIKPKT-----EGKHPALIRFHGYSSNS---GDWND--KLNYV-AAGFTVVAMDVRGQGGQS  149 (346)
T ss_dssp             EEEEEEEECGGGCEEEEEEEEESC-----SSCEEEEEEECCTTCCS---CCSGG--GHHHH-TTTCEEEEECCTTSSSSC
T ss_pred             EEEEEEEEcCCCCEEEEEEEecCC-----CCCcCEEEEECCCCCCC---CChhh--hhHHH-hCCcEEEEEcCCCCCCCC
Confidence            356778888899999999999974     45689999999998763   33332  22344 489999999999988755


Q ss_pred             hhhHhhhh------ccCCc----------cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEE
Q psy463          549 NTLKYAGY------RRLGT----------VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKC  612 (790)
Q Consensus       549 ~~~~~~~~------~~~~~----------~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~  612 (790)
                      ........      ...+.          ..+.|+.++++++.. ...+|..||+|+|||+||.+++.++..+|.  +++
T Consensus       150 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~-~~~~d~~~i~l~G~S~GG~la~~~a~~~p~--v~~  226 (346)
T 3fcy_A          150 QDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMN-MPEVDEDRVGVMGPSQGGGLSLACAALEPR--VRK  226 (346)
T ss_dssp             CCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHT-STTEEEEEEEEEEETHHHHHHHHHHHHSTT--CCE
T ss_pred             CCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcCcEEEEEcCHHHHHHHHHHHhCcc--ccE
Confidence            43211000      00000          125889999999987 667888999999999999999999999874  889


Q ss_pred             EEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc
Q psy463          613 GISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM  692 (790)
Q Consensus       613 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~  692 (790)
                      +++.+|......  ..+..   ...     ...+...  .......            +..  ..........+.     
T Consensus       227 ~vl~~p~~~~~~--~~~~~---~~~-----~~~~~~~--~~~~~~~------------~~~--~~~~~~~~~~~~-----  275 (346)
T 3fcy_A          227 VVSEYPFLSDYK--RVWDL---DLA-----KNAYQEI--TDYFRLF------------DPR--HERENEVFTKLG-----  275 (346)
T ss_dssp             EEEESCSSCCHH--HHHHT---TCC-----CGGGHHH--HHHHHHH------------CTT--CTTHHHHHHHHG-----
T ss_pred             EEECCCcccCHH--HHhhc---ccc-----ccchHHH--HHHHHhc------------CCC--cchHHHHHHHhC-----
Confidence            998888643110  00000   000     0000000  0000000            000  000111111111     


Q ss_pred             hhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          693 FQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                                          ..++...+.++ ++|+|+++|+.|..+|+..+..+++.+..   +++++++|+++|.+. 
T Consensus       276 --------------------~~d~~~~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-  330 (346)
T 3fcy_A          276 --------------------YIDVKNLAKRI-KGDVLMCVGLMDQVCPPSTVFAAYNNIQS---KKDIKVYPDYGHEPM-  330 (346)
T ss_dssp             --------------------GGCHHHHGGGC-CSEEEEEEETTCSSSCHHHHHHHHTTCCS---SEEEEEETTCCSSCC-
T ss_pred             --------------------cccHHHHHHhc-CCCEEEEeeCCCCcCCHHHHHHHHHhcCC---CcEEEEeCCCCCcCH-
Confidence                                11233667888 99999999999999999999888877654   579999999999996 


Q ss_pred             cchHHHHHHHHHHHHhh
Q psy463          773 VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       773 ~~~~~~~~i~~fl~~~l  789 (790)
                        .++.+.+.+||++..
T Consensus       331 --~~~~~~i~~fl~~l~  345 (346)
T 3fcy_A          331 --RGFGDLAMQFMLELY  345 (346)
T ss_dssp             --TTHHHHHHHHHHTTC
T ss_pred             --HHHHHHHHHHHHHhh
Confidence              577899999998753

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.82  E-value=2.8e-18  Score=185.16  Aligned_cols=228  Identities=16%  Similarity=0.138  Sum_probs=162.1

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      .|+|||||++|++.+...+          ...|+++++.+++      ..+++.....+ .-..|+|+++. ++|.....
T Consensus       183 ~~~~Spdg~~la~~s~~~~----------~~~i~~~d~~tg~------~~~l~~~~~~~-~~~~~spdg~~-la~~~~~~  244 (415)
T 2hqs_A          183 SPAWSPDGSKLAYVTFESG----------RSALVIQTLANGA------VRQVASFPRHN-GAPAFSPDGSK-LAFALSKT  244 (415)
T ss_dssp             EEEECTTSSEEEEEECTTS----------SCEEEEEETTTCC------EEEEECCSSCE-EEEEECTTSSE-EEEEECTT
T ss_pred             eeEEcCCCCEEEEEEecCC----------CcEEEEEECCCCc------EEEeecCCCcc-cCEEEcCCCCE-EEEEEecC
Confidence            4689999999999875332          2389999998874      34455444333 34578888764 55444321


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                               ....||++|+++++      ..+++                 ........+.|||||+.+++.....+..+
T Consensus       245 ---------g~~~i~~~d~~~~~------~~~l~-----------------~~~~~~~~~~~spdg~~l~~~s~~~g~~~  292 (415)
T 2hqs_A          245 ---------GSLNLYVMDLASGQ------IRQVT-----------------DGRSNNTEPTWFPDSQNLAFTSDQAGRPQ  292 (415)
T ss_dssp             ---------SSCEEEEEETTTCC------EEECC-----------------CCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred             ---------CCceEEEEECCCCC------EEeCc-----------------CCCCcccceEECCCCCEEEEEECCCCCcE
Confidence                     12589999999876      34444                 44556789999999996666554444567


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      |+++++.+++.+.++...   .+   ...+.|||||+.|++...    .+|      ...|+++|+++++      .+.|
T Consensus       293 i~~~d~~~~~~~~l~~~~---~~---~~~~~~spdG~~l~~~~~----~~g------~~~i~~~d~~~~~------~~~l  350 (415)
T 2hqs_A          293 VYKVNINGGAPQRITWEG---SQ---NQDADVSSDGKFMVMVSS----NGG------QQHIAKQDLATGG------VQVL  350 (415)
T ss_dssp             EEEEETTSSCCEECCCSS---SE---EEEEEECTTSSEEEEEEE----CSS------CEEEEEEETTTCC------EEEC
T ss_pred             EEEEECCCCCEEEEecCC---Cc---ccCeEECCCCCEEEEEEC----cCC------ceEEEEEECCCCC------EEEe
Confidence            999999998876654321   11   346899999999986554    334      4689999999887      6777


Q ss_pred             cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCc
Q psy463          353 TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVS  425 (790)
Q Consensus       353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~  425 (790)
                      +.+. .+. .++|+|||+.|++.+..+.  ...||.+++++  +..+.|+.       ..+.+.+++|||-..
T Consensus       351 ~~~~-~~~-~~~~spdg~~l~~~s~~~~--~~~l~~~d~~g--~~~~~l~~-------~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          351 SSTF-LDE-TPSLAPNGTMVIYSSSQGM--GSVLNLVSTDG--RFKARLPA-------TDGQVKFPAWSPYLH  410 (415)
T ss_dssp             CCSS-SCE-EEEECTTSSEEEEEEEETT--EEEEEEEETTS--CCEEECCC-------SSSEEEEEEECCCCC
T ss_pred             cCCC-CcC-CeEEcCCCCEEEEEEcCCC--ccEEEEEECCC--CcEEEeeC-------CCCCCcCCccccccc
Confidence            7654 333 3899999999999887643  36899999987  56666665       567889999999754

>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A

Probab=99.82  E-value=4.8e-19  Score=199.93  Aligned_cols=292  Identities=15%  Similarity=0.122  Sum_probs=180.3

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-------chHHHHHhcCCeEEEEEcCC
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-------DWNLYLADNKDIVVAYIDGR  542 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-------~~~~~~~~~~G~~v~~~d~r  542 (790)
                      .+.+.++..||.+|.++++.|.+     .+++|+||++||..........+..       ....+.++++||+|+.+|+|
T Consensus        37 ~~~v~i~~~DG~~L~~~l~~P~~-----~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~R  111 (652)
T 2b9v_A           37 KREVMVPMRDGVKLYTVIVIPKN-----ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIR  111 (652)
T ss_dssp             EEEEEEECTTSCEEEEEEEEETT-----CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECT
T ss_pred             EEEEEEECCCCcEEEEEEEecCC-----CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecC
Confidence            46678889999999999999974     3578999999975443100001110       01104455689999999999


Q ss_pred             CCCCChhhhHhhh-----hccCCccchhHHHHHHHHHHHhC-CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEe
Q psy463          543 NSALKGNTLKYAG-----YRRLGTVEIYDQINVTRYLQENL-PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISV  616 (790)
Q Consensus       543 G~~~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~~-~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~  616 (790)
                      |+++++..+....     +..++..+++|+.++++|+.+ . ++.| .||+|+|+||||++++.++.++++ .++++|+.
T Consensus       112 G~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~-~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~-~lka~v~~  188 (652)
T 2b9v_A          112 GKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVH-NVPESN-GRVGMTGSSYEGFTVVMALLDPHP-ALKVAAPE  188 (652)
T ss_dssp             TSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHH-SCTTEE-EEEEEEEEEHHHHHHHHHHTSCCT-TEEEEEEE
T ss_pred             cCCCCCCcccccccccccccccccchhhHHHHHHHHHHh-cCCCCC-CCEEEEecCHHHHHHHHHHhcCCC-ceEEEEec
Confidence            9998876654331     122234788999999999998 5 7777 599999999999999999987764 89999999


Q ss_pred             CCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHH------HHHHHH-Hhc
Q psy463          617 APVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSM------MLAKSL-QHA  689 (790)
Q Consensus       617 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~------~l~~~l-~~~  689 (790)
                      +++.++......+..   |..  ......+...     ....+..+....+...+.   +....      .+.+.+ .. 
T Consensus       189 ~~~~d~~~~d~~~~~---G~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~-  254 (652)
T 2b9v_A          189 SPMVDGWMGDDWFHY---GAF--RQGAFDYFVS-----QMTARGGGNDIPRRDADD---YTNFLKAGSAGSFATQAGLD-  254 (652)
T ss_dssp             EECCCTTTBSSSEET---TEE--BTTHHHHHHH-----HHSSSSCCCCCCCSSSCH---HHHHHHHCSHHHHHHHTTGG-
T ss_pred             ccccccccccceecC---Cch--hhhhHHHHHH-----hhhcccCcccccccchHH---HHHHhhcCchhhHHHhhccc-
Confidence            999886420111100   000  0000000000     000000000000000000   00000      000000 00 


Q ss_pred             CcchhcccccCCCCcCCcchhhhhhhhhhhhhc--cCCccEEEEecCCCcccchhhhHHHHHHHHhcC--CceEEEEcCC
Q psy463          690 DIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDR--IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD--IMFQSQTYPD  765 (790)
Q Consensus       690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g--~~~~~~~~p~  765 (790)
                      ... ........+   ....+|+..++...+++  | ++|+|++||..|.+ +..++.+++++|+..+  +++++++.|.
T Consensus       255 ~~~-~~~~~~~~p---~~d~yw~~~Sp~~~~~~~~I-~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~  328 (652)
T 2b9v_A          255 QYP-FWQRMHAHP---AYDAFWQGQALDKILAQRKP-TVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPW  328 (652)
T ss_dssp             GCH-HHHHHHHCC---SSSHHHHTTCHHHHHHHHCC-CSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESC
T ss_pred             cch-HHHHHHhCC---CCChHHhcCChhhhhhcCCC-CCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCC
Confidence            000 000111111   22467788888899999  9 99999999999997 7788999999999998  8889998887


Q ss_pred             CCCcCCC---------------cchHHHHHHHHHHHHhhC
Q psy463          766 EEHGLIG---------------VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       766 ~~H~~~~---------------~~~~~~~~i~~fl~~~l~  790 (790)
                       +|....               ......+.+++||++||+
T Consensus       329 -~H~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lk  367 (652)
T 2b9v_A          329 -RHSGVNYNGSTLGPLEFEGDTAHQYRRDVFRPFFDEYLK  367 (652)
T ss_dssp             -CTTGGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHS
T ss_pred             -CCCCcccccccCCccccccccchhhhhhHHHHHHHHHhC
Confidence             797521               012236889999999986

>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A

Probab=99.82  E-value=2.2e-19  Score=187.09  Aligned_cols=256  Identities=16%  Similarity=0.112  Sum_probs=163.1

Q ss_pred             ceEEEEEEcCCCc-EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          469 SVEYMSVPIQPNM-EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       469 ~~~~~~~~~~dg~-~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ..+.+++...+|. .+.+.++.|.+    ..++.|+||++||++........|. .+...++.+.||.|+++|+||++.+
T Consensus        50 ~~~~~~i~~~~g~~~l~~~~~~P~~----~~~~~p~vv~~HGgg~~~g~~~~~~-~~~~~la~~~G~~Vv~~d~rg~~~~  124 (323)
T 1lzl_A           50 SLRELSAPGLDGDPEVKIRFVTPDN----TAGPVPVLLWIHGGGFAIGTAESSD-PFCVEVARELGFAVANVEYRLAPET  124 (323)
T ss_dssp             EEEEEEECCSTTCCCEEEEEEEESS----CCSCEEEEEEECCSTTTSCCGGGGH-HHHHHHHHHHCCEEEEECCCCTTTS
T ss_pred             eEEEEEecCCCCCceeEEEEEecCC----CCCCCcEEEEECCCccccCChhhhH-HHHHHHHHhcCcEEEEecCCCCCCC
Confidence            4567778887887 89999999975    3456899999999884321122332 2344555445999999999998765


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHhC--CCcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENL--PYIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDW  622 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~  622 (790)
                      ...           ..++|+.++++|+.++.  ..+|.++|+|+|||+||.+++.++.++++   ..++++++.+|+.+.
T Consensus       125 ~~~-----------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~  193 (323)
T 1lzl_A          125 TFP-----------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD  193 (323)
T ss_dssp             CTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred             CCC-----------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCC
Confidence            432           34678888888887621  12677899999999999999999887553   258899999998765


Q ss_pred             ccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          623 IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       623 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                      ......+. .+...+                                   ...........+........          
T Consensus       194 ~~~~~~~~-~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~----------  227 (323)
T 1lzl_A          194 RLETVSMT-NFVDTP-----------------------------------LWHRPNAILSWKYYLGESYS----------  227 (323)
T ss_dssp             TCCSHHHH-HCSSCS-----------------------------------SCCHHHHHHHHHHHHCTTCC----------
T ss_pred             CcCchhHH-HhccCC-----------------------------------CCCHHHHHHHHHHhCCCCcc----------
Confidence            42110000 000000                                   00000011111111110000          


Q ss_pred             CcCCcchhhhhhhhhhhhhccC-CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----cchH
Q psy463          703 TFEDNLEGYKIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----VRPH  776 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~i~-~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----~~~~  776 (790)
                       ...........++.. ...++ .+|+|++||+.|..+  .++..+++.|+++|.++++++|||++|.+..     ...+
T Consensus       228 -~~~~~~~~~~~sp~~-~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~  303 (323)
T 1lzl_A          228 -GPEDPDVSIYAAPSR-ATDLTGLPPTYLSTMELDPLR--DEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSER  303 (323)
T ss_dssp             -CTTCSCCCTTTCGGG-CSCCTTCCCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHH
T ss_pred             -cccccCCCcccCccc-CcccCCCChhheEECCcCCch--HHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHH
Confidence             000000000011111 11221 279999999999987  5888999999999999999999999998653     2568


Q ss_pred             HHHHHHHHHHHhhC
Q psy463          777 FYHTLERFLDSCFA  790 (790)
Q Consensus       777 ~~~~i~~fl~~~l~  790 (790)
                      +++.+.+||+++|+
T Consensus       304 ~~~~i~~fl~~~l~  317 (323)
T 1lzl_A          304 GAAEALTAIRRGLR  317 (323)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999998864

>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21

Probab=99.82  E-value=3.3e-19  Score=200.73  Aligned_cols=296  Identities=14%  Similarity=0.147  Sum_probs=178.5

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcc---ccc-cccccchH-H-HHHhcCCeEEEEEcCCC
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSF---QVT-ERFSVDWN-L-YLADNKDIVVAYIDGRN  543 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~---~~~-~~~~~~~~-~-~~~~~~G~~v~~~d~rG  543 (790)
                      .+.+.++..||.+|.++++.|.+     .+++|+||++||.....   ... ..|...+. . +.++++||+|+.+|+||
T Consensus        25 ~~~v~i~~~DG~~L~~~~~~P~~-----~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG   99 (615)
T 1mpx_A           25 KREVMIPMRDGVKLHTVIVLPKG-----AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRG   99 (615)
T ss_dssp             EEEEEEECTTSCEEEEEEEEETT-----CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTT
T ss_pred             EEEEEEECCCCCEEEEEEEeCCC-----CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCC
Confidence            45678888999999999999974     35789999999865531   000 01110011 1 44556899999999999


Q ss_pred             CCCChhhhHhhh-----hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC
Q psy463          544 SALKGNTLKYAG-----YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP  618 (790)
Q Consensus       544 ~~~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~  618 (790)
                      +++++..+....     +..++..+++|+.++++|+.++.++.| .||+|+|+||||++++.++..+++ .++++|+.+|
T Consensus       100 ~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~-~l~a~v~~~~  177 (615)
T 1mpx_A          100 KYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHP-ALKVAVPESP  177 (615)
T ss_dssp             STTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCT-TEEEEEEESC
T ss_pred             CCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCC-ceEEEEecCC
Confidence            988776543321     123333789999999999998436666 599999999999999999987764 8999999999


Q ss_pred             CCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhh---HHHHHHHH-HhcCcchh
Q psy463          619 VTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQ---SMMLAKSL-QHADIMFQ  694 (790)
Q Consensus       619 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~---~~~l~~~l-~~~~~~~~  694 (790)
                      +.++......+..   |... ......+....   ...... ..  +.....|.......   ...+.+.+ .. ...+ 
T Consensus       178 ~~d~~~~~~~~~~---G~~~-l~~~~~~~~~~---~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~-  245 (615)
T 1mpx_A          178 MIDGWMGDDWFNY---GAFR-QVNFDYFTGQL---SKRGKG-AG--IARQGHDDYSNFLQAGSAGDFAKAAGLE-QLPW-  245 (615)
T ss_dssp             CCCTTTTSSSEET---TEEB-GGGHHHHHHHH---SSSSCC-CC--CCCSSSCHHHHHHHHCSHHHHHHHTTGG-GSHH-
T ss_pred             ccccccccccccC---Ceeh-hhhHHHHHHhh---cccCCc-cc--ccccchhHHHHHhhcCCccchhhhhccc-cchH-
Confidence            9884220000000   0000 00000000000   000000 00  00000000000000   00000000 00 0000 


Q ss_pred             cccccCCCCcCCcchhhhhhhhhhhhhc--cCCccEEEEecCCCcccchhhhHHHHHHHHhcCCc---eEEEEcCCCCCc
Q psy463          695 SQRYMGLPTFEDNLEGYKIAALNNKVDR--IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM---FQSQTYPDEEHG  769 (790)
Q Consensus       695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~---~~~~~~p~~~H~  769 (790)
                      ...+...   +....+|+..++..++++  | ++|+|++||..|.+ +..++.+++++|+..|.+   +++++.|. +|.
T Consensus       246 ~~~~~~~---~~~d~~w~~~Sp~~~~~~~~I-~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~  319 (615)
T 1mpx_A          246 WHKLTEH---AAYDAFWQEQALDKVMARTPL-KVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHS  319 (615)
T ss_dssp             HHHHHHT---CSSCHHHHTTCHHHHHHTSCC-CSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTT
T ss_pred             HHHHHhC---CCcChhhhhcChhhhhhccCC-CCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCC
Confidence            0000011   122467888899899999  9 99999999999997 889999999999998753   78888888 686


Q ss_pred             CCC--------------cc-hHHHHHHHHHHHHhhC
Q psy463          770 LIG--------------VR-PHFYHTLERFLDSCFA  790 (790)
Q Consensus       770 ~~~--------------~~-~~~~~~i~~fl~~~l~  790 (790)
                      ...              .. ....+.+++||++||+
T Consensus       320 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lk  355 (615)
T 1mpx_A          320 QVNYDGSALGALNFEGDTARQFRHDVLRPFFDQYLV  355 (615)
T ss_dssp             GGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHS
T ss_pred             CccccccccCccccCcccchhhhhhHHHHHHHHHhc
Confidence            510              01 1226788999999986

>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*

Probab=99.82  E-value=8.6e-19  Score=182.22  Aligned_cols=247  Identities=16%  Similarity=0.103  Sum_probs=162.0

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCc-cccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSS-FQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~-~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ..+.+++...+|..+.++++.|.+     .++.|+||++||+++. ..   .|.  ....++ ++||.|+++|+||++.+
T Consensus        55 ~~~~~~~~~~~g~~i~~~~~~P~~-----~~~~p~vv~~HG~~~~~~~---~~~--~~~~l~-~~g~~v~~~d~rg~g~s  123 (318)
T 1l7a_A           55 KVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNASYDG---EIH--EMVNWA-LHGYATFGMLVRGQQRS  123 (318)
T ss_dssp             EEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCCSGG---GHH--HHHHHH-HTTCEEEEECCTTTSSS
T ss_pred             EEEEEEEEccCCCEEEEEEEeeCC-----CCCccEEEEEcCCCCCCCC---Ccc--cccchh-hCCcEEEEecCCCCCCC
Confidence            356677887789999999999974     3568999999998876 32   221  222344 47999999999998876


Q ss_pred             hhhhHhh-----hhccCC---------ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEE
Q psy463          548 GNTLKYA-----GYRRLG---------TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCG  613 (790)
Q Consensus       548 g~~~~~~-----~~~~~~---------~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~  613 (790)
                      .......     .....+         ...+.|+.++++++.+ .+.+|..+|+|+|||+||.+++.++..+|  .++++
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~a~~~~--~~~~~  200 (318)
T 1l7a_A          124 EDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISS-FDEVDETRIGVTGGSQGGGLTIAAAALSD--IPKAA  200 (318)
T ss_dssp             CCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHH-STTEEEEEEEEEEETHHHHHHHHHHHHCS--CCSEE
T ss_pred             CCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcccceeEEEecChHHHHHHHHhccCC--CccEE
Confidence            5432100     000000         1347899999999998 56688899999999999999999999887  36666


Q ss_pred             EEeCCCCC-cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc
Q psy463          614 ISVAPVTD-WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM  692 (790)
Q Consensus       614 v~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~  692 (790)
                      ++.+|... +....    ......+  ......+...        .            +   ...........+..    
T Consensus       201 v~~~p~~~~~~~~~----~~~~~~~--~~~~~~~~~~--------~------------~---~~~~~~~~~~~~~~----  247 (318)
T 1l7a_A          201 VADYPYLSNFERAI----DVALEQP--YLEINSFFRR--------N------------G---SPETEVQAMKTLSY----  247 (318)
T ss_dssp             EEESCCSCCHHHHH----HHCCSTT--TTHHHHHHHH--------S------------C---CHHHHHHHHHHHHT----
T ss_pred             EecCCcccCHHHHH----hcCCcCc--cHHHHHHHhc--------c------------C---CcccHHHHHHhhcc----
Confidence            77777532 21100    0000000  0000000000        0            0   00001111111111    


Q ss_pred             hhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          693 FQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                                           .++...+.++ ++|+|+++|+.|..+|++.+..+++.+..   +++++++|+++|..  
T Consensus       248 ---------------------~~~~~~~~~~-~~P~li~~g~~D~~~~~~~~~~~~~~l~~---~~~~~~~~~~~H~~--  300 (318)
T 1l7a_A          248 ---------------------FDIMNLADRV-KVPVLMSIGLIDKVTPPSTVFAAYNHLET---KKELKVYRYFGHEY--  300 (318)
T ss_dssp             ---------------------TCHHHHGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHCCS---SEEEEEETTCCSSC--
T ss_pred             ---------------------ccHHHHHhhC-CCCEEEEeccCCCCCCcccHHHHHhhcCC---CeeEEEccCCCCCC--
Confidence                                 1223567788 89999999999999999999999888764   37999999999994  


Q ss_pred             cchHHHHHHHHHHHHhhC
Q psy463          773 VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       773 ~~~~~~~~i~~fl~~~l~  790 (790)
                       ..+..+.+.+||+++|+
T Consensus       301 -~~~~~~~~~~fl~~~l~  317 (318)
T 1l7a_A          301 -IPAFQTEKLAFFKQILK  317 (318)
T ss_dssp             -CHHHHHHHHHHHHHHHC
T ss_pred             -cchhHHHHHHHHHHHhC
Confidence             45778999999999875

>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A

Probab=99.82  E-value=1.2e-19  Score=187.93  Aligned_cols=251  Identities=15%  Similarity=0.171  Sum_probs=162.9

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+++...+| .+.+.+|.|.+.    .++.|+||++|||+........|. .+...++.+.||.|+.+|+||++.+.
T Consensus        47 ~~~~~~i~~~~g-~l~~~~~~P~~~----~~~~p~vv~~HGGg~~~g~~~~~~-~~~~~la~~~g~~v~~~d~rg~~~~~  120 (310)
T 2hm7_A           47 EVREFDMDLPGR-TLKVRMYRPEGV----EPPYPALVYYHGGSWVVGDLETHD-PVCRVLAKDGRAVVFSVDYRLAPEHK  120 (310)
T ss_dssp             EEEEEEEEETTE-EEEEEEEECTTC----CSSEEEEEEECCSTTTSCCTTTTH-HHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred             eEEEEEeccCCC-eEEEEEEecCCC----CCCCCEEEEECCCccccCChhHhH-HHHHHHHHhcCCEEEEeCCCCCCCCC
Confidence            456778888777 999999999752    356899999999764322123332 23444444349999999999987654


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCcc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDWI  623 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~~  623 (790)
                      ..           ..++|+.++++|+.++..  .+|.++++|+|||+||.+++.++.++++   ..++++++.+|+.+..
T Consensus       121 ~~-----------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~  189 (310)
T 2hm7_A          121 FP-----------AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYD  189 (310)
T ss_dssp             TT-----------HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCC
T ss_pred             CC-----------ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCC
Confidence            32           347889999999987321  2577899999999999999999987653   2688999999987653


Q ss_pred             cccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCC
Q psy463          624 YYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPT  703 (790)
Q Consensus       624 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  703 (790)
                      ....               ...+...         .          ............+...... ... ..    ..+ 
T Consensus       190 ~~~~---------------~~~~~~~---------~----------~~~~~~~~~~~~~~~~~~~-~~~-~~----~~~-  228 (310)
T 2hm7_A          190 PAHP---------------PASIEEN---------A----------EGYLLTGGMMLWFRDQYLN-SLE-EL----THP-  228 (310)
T ss_dssp             TTSC---------------CHHHHHT---------S----------SSSSSCHHHHHHHHHHHCS-SGG-GG----GCT-
T ss_pred             cccC---------------Ccchhhc---------C----------CCCCCCHHHHHHHHHHhCC-CCC-cc----CCc-
Confidence            1000               0000000         0          0000000000011111100 000 00    000 


Q ss_pred             cCCcchhhhhhhhh--hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cch
Q psy463          704 FEDNLEGYKIAALN--NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRP  775 (790)
Q Consensus       704 ~~~~~~~~~~~~~~--~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~  775 (790)
                               ..++.  ..+.++  .|+|++||++|..+  .++..+++.|+++|.+++++++|+++|.+..      ..+
T Consensus       229 ---------~~~p~~~~~l~~~--~P~lii~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~  295 (310)
T 2hm7_A          229 ---------WFSPVLYPDLSGL--PPAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGAT  295 (310)
T ss_dssp             ---------TTCGGGCSCCTTC--CCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHH
T ss_pred             ---------cCCCCcCccccCC--CCEEEEEecCCCch--HHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHH
Confidence                     00111  123334  49999999999987  5788999999999999999999999997753      347


Q ss_pred             HHHHHHHHHHHHhhC
Q psy463          776 HFYHTLERFLDSCFA  790 (790)
Q Consensus       776 ~~~~~i~~fl~~~l~  790 (790)
                      ++.+.+.+||+++|+
T Consensus       296 ~~~~~i~~fl~~~l~  310 (310)
T 2hm7_A          296 KALVRIAEKLRDALA  310 (310)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhC
Confidence            889999999999875

>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}

Probab=99.81  E-value=8.5e-19  Score=177.75  Aligned_cols=266  Identities=11%  Similarity=0.068  Sum_probs=159.6

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      ....+...||..+.+.++.|.+     .++.|+||++||++........|.. .....+++. |.|+++|+||++.....
T Consensus         4 ~~~~~~~~dg~~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~~~~~~~-~~~~~l~~~-~~v~~~d~~~~~~~~~~   76 (275)
T 3h04_A            4 IKYKVITKDAFALPYTIIKAKN-----QPTKGVIVYIHGGGLMFGKANDLSP-QYIDILTEH-YDLIQLSYRLLPEVSLD   76 (275)
T ss_dssp             EEEEEECTTSCEEEEEEECCSS-----SSCSEEEEEECCSTTTSCCTTCSCH-HHHHHHTTT-EEEEEECCCCTTTSCHH
T ss_pred             eEEEEecCCcEEEEEEEEccCC-----CCCCCEEEEEECCcccCCchhhhHH-HHHHHHHhC-ceEEeeccccCCccccc
Confidence            3456777899999999999873     3467999999998843211222322 344455545 99999999997754332


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS  630 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~  630 (790)
                                 ..++|+.++++++.++   ++..+++|+||||||.+++.++.+   ..++++++.+|+.+.........
T Consensus        77 -----------~~~~d~~~~~~~l~~~---~~~~~i~l~G~S~Gg~~a~~~a~~---~~v~~~v~~~~~~~~~~~~~~~~  139 (275)
T 3h04_A           77 -----------CIIEDVYASFDAIQSQ---YSNCPIFTFGRSSGAYLSLLIARD---RDIDGVIDFYGYSRINTEPFKTT  139 (275)
T ss_dssp             -----------HHHHHHHHHHHHHHHT---TTTSCEEEEEETHHHHHHHHHHHH---SCCSEEEEESCCSCSCSHHHHSC
T ss_pred             -----------hhHHHHHHHHHHHHhh---CCCCCEEEEEecHHHHHHHHHhcc---CCccEEEeccccccccccccccc
Confidence                       3478899999999883   556899999999999999999997   48899999999876532100000


Q ss_pred             hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463          631 ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG  710 (790)
Q Consensus       631 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  710 (790)
                      ..+.         ..............+.....     ..+...  .....+..........   ..+.....     ..
T Consensus       140 ~~~~---------~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~-----~~  195 (275)
T 3h04_A          140 NSYY---------AKIAQSINETMIAQLTSPTP-----VVQDQI--AQRFLIYVYARGTGKW---INMINIAD-----YT  195 (275)
T ss_dssp             CHHH---------HHHHTTSCHHHHHTTSCSSC-----CSSCSS--GGGHHHHHHHHHHTCH---HHHHCCSC-----TT
T ss_pred             cchh---------hcccccchHHHHhcccCCCC-----cCCCcc--ccchhhhhhhhhcCch---HHhhcccc-----cc
Confidence            0000         00000000000111100000     000000  0001111000000000   00000000     00


Q ss_pred             hhhh-hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cc---hHHHHHHHHHH
Q psy463          711 YKIA-ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VR---PHFYHTLERFL  785 (790)
Q Consensus       711 ~~~~-~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~---~~~~~~i~~fl  785 (790)
                      +... .....+.++ . |+|+++|++|..+|+..+..+++.++.    .+++++|+++|.+.. ..   +++.+.+.+||
T Consensus       196 ~~~~~~~~~~~~~~-~-P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl  269 (275)
T 3h04_A          196 DSKYNIAPDELKTL-P-PVFIAHCNGDYDVPVEESEHIMNHVPH----STFERVNKNEHDFDRRPNDEAITIYRKVVDFL  269 (275)
T ss_dssp             SGGGSCCHHHHTTC-C-CEEEEEETTCSSSCTHHHHHHHTTCSS----EEEEEECSSCSCTTSSCCHHHHHHHHHHHHHH
T ss_pred             ccccccccchhccC-C-CEEEEecCCCCCCChHHHHHHHHhcCC----ceEEEeCCCCCCcccCCchhHHHHHHHHHHHH
Confidence            0000 011335677 6 999999999999999999988876654    479999999999887 44   69999999999


Q ss_pred             HHhhC
Q psy463          786 DSCFA  790 (790)
Q Consensus       786 ~~~l~  790 (790)
                      +++|.
T Consensus       270 ~~~l~  274 (275)
T 3h04_A          270 NAITM  274 (275)
T ss_dssp             HHHHC
T ss_pred             HHHhc
Confidence            99874

>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A

Probab=99.81  E-value=1e-18  Score=181.39  Aligned_cols=246  Identities=14%  Similarity=0.157  Sum_probs=159.8

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+++...+| .+.+.+|.|.+     .++.|+||++|||+........|. .+...++.+.||.|+++|+||++.+.
T Consensus        64 ~~~~~~i~~~~~-~i~~~iy~P~~-----~~~~p~vv~~HGGg~~~g~~~~~~-~~~~~La~~~g~~Vv~~Dyrg~~~~~  136 (323)
T 3ain_A           64 KIEDITIPGSET-NIKARVYYPKT-----QGPYGVLVYYHGGGFVLGDIESYD-PLCRAITNSCQCVTISVDYRLAPENK  136 (323)
T ss_dssp             EEEEEEEECSSS-EEEEEEEECSS-----CSCCCEEEEECCSTTTSCCTTTTH-HHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred             EEEEEEecCCCC-eEEEEEEecCC-----CCCCcEEEEECCCccccCChHHHH-HHHHHHHHhcCCEEEEecCCCCCCCC
Confidence            456778887777 89999999974     346799999999874322133332 23444444359999999999987643


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCCCc-CCCceEEEEechHHHHHHHHHhcCCCCce---EEEEEeCCCCCccc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI-DKTRTAIWGWSYGGYATGLALALDPSNVF---KCGISVAPVTDWIY  624 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~-d~~ri~i~G~S~GG~~a~~~a~~~p~~~~---~~~v~~~~~~~~~~  624 (790)
                      ..           ..++|+.++++|+.++.... |.++|+|+|+|+||.+++.++.++++ ..   +++++.+|+.+...
T Consensus       137 ~p-----------~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~-~~~~~~~~vl~~p~~~~~~  204 (323)
T 3ain_A          137 FP-----------AAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKK-ENIKLKYQVLIYPAVSFDL  204 (323)
T ss_dssp             TT-----------HHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHH-TTCCCSEEEEESCCCSCCS
T ss_pred             Cc-----------chHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhh-cCCCceeEEEEeccccCCC
Confidence            22           34788999999998742222 77899999999999999999987764 32   78888999876432


Q ss_pred             ccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463          625 YDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTF  704 (790)
Q Consensus       625 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  704 (790)
                      ....+.. +...+                                   .........+.+.... ...            
T Consensus       205 ~~~~~~~-~~~~~-----------------------------------~l~~~~~~~~~~~~~~-~~~------------  235 (323)
T 3ain_A          205 ITKSLYD-NGEGF-----------------------------------FLTREHIDWFGQQYLR-SFA------------  235 (323)
T ss_dssp             CCHHHHH-HSSSS-----------------------------------SSCHHHHHHHHHHHCS-SGG------------
T ss_pred             CCccHHH-hccCC-----------------------------------CCCHHHHHHHHHHhCC-CCc------------
Confidence            1100000 00000                                   0000000001111000 000            


Q ss_pred             CCcchhhhhhhhhh-hhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cchHH
Q psy463          705 EDNLEGYKIAALNN-KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRPHF  777 (790)
Q Consensus       705 ~~~~~~~~~~~~~~-~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~~~  777 (790)
                       ....  ...+++. .+..+  .|+|+++|+.|..+  .++..+++.|+.++++++++++|+++|.+..      ..+++
T Consensus       236 -~~~~--~~~sp~~~~l~~l--~P~lii~G~~D~l~--~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~  308 (323)
T 3ain_A          236 -DLLD--FRFSPILADLNDL--PPALIITAEHDPLR--DQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDA  308 (323)
T ss_dssp             -GGGC--TTTCGGGSCCTTC--CCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHH
T ss_pred             -ccCC--cccCcccCcccCC--CHHHEEECCCCccH--HHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHH
Confidence             0000  0001111 23334  59999999999987  5788999999999999999999999999864      34788


Q ss_pred             HHHHHHHHHHhh
Q psy463          778 YHTLERFLDSCF  789 (790)
Q Consensus       778 ~~~i~~fl~~~l  789 (790)
                      .+.+.+||+++|
T Consensus       309 ~~~i~~fl~~~l  320 (323)
T 3ain_A          309 IGLIGYVLRKVF  320 (323)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999999886

>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36

Probab=99.81  E-value=7.6e-19  Score=171.90  Aligned_cols=210  Identities=16%  Similarity=0.087  Sum_probs=154.3

Q ss_pred             CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       468 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ...+.+++...+| .+.++++.|.+..   .++.|+||++||++.................++++||.|+++|+||++.+
T Consensus         8 ~~~~~~~~~~~~g-~~~~~~~~p~~~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s   83 (220)
T 2fuk_A            8 TESAALTLDGPVG-PLDVAVDLPEPDV---AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTS   83 (220)
T ss_dssp             SSCEEEEEEETTE-EEEEEEECCCTTS---CCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTC
T ss_pred             ccceEEEEeCCCC-eEEEEEEeCCCCC---ccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence            3457788888888 8999999997410   14579999999965321111111112233445568999999999998765


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT  627 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~  627 (790)
                      ....      .......+|+.++++++.++.   +..+++++|||+||.+++.++.++   .++++++.+|......   
T Consensus        84 ~~~~------~~~~~~~~d~~~~~~~l~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~---~v~~~v~~~~~~~~~~---  148 (220)
T 2fuk_A           84 AGSF------DHGDGEQDDLRAVAEWVRAQR---PTDTLWLAGFSFGAYVSLRAAAAL---EPQVLISIAPPAGRWD---  148 (220)
T ss_dssp             CSCC------CTTTHHHHHHHHHHHHHHHHC---TTSEEEEEEETHHHHHHHHHHHHH---CCSEEEEESCCBTTBC---
T ss_pred             CCCc------ccCchhHHHHHHHHHHHHhcC---CCCcEEEEEECHHHHHHHHHHhhc---cccEEEEecccccchh---
Confidence            4332      122345889999999998842   567999999999999999999876   6788888887643210   


Q ss_pred             cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc
Q psy463          628 IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN  707 (790)
Q Consensus       628 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  707 (790)
                                        +                                                             
T Consensus       149 ------------------~-------------------------------------------------------------  149 (220)
T 2fuk_A          149 ------------------F-------------------------------------------------------------  149 (220)
T ss_dssp             ------------------C-------------------------------------------------------------
T ss_pred             ------------------h-------------------------------------------------------------
Confidence                              0                                                             


Q ss_pred             chhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHH
Q psy463          708 LEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDS  787 (790)
Q Consensus       708 ~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~  787 (790)
                                ..+. . .+|+|+++|++|..+|++.+..+++.+.   .+++++++++++|.+....+++.+.+.+||.+
T Consensus       150 ----------~~~~-~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~  214 (220)
T 2fuk_A          150 ----------SDVQ-P-PAQWLVIQGDADEIVDPQAVYDWLETLE---QQPTLVRMPDTSHFFHRKLIDLRGALQHGVRR  214 (220)
T ss_dssp             ----------TTCC-C-CSSEEEEEETTCSSSCHHHHHHHHTTCS---SCCEEEEETTCCTTCTTCHHHHHHHHHHHHGG
T ss_pred             ----------hhcc-c-CCcEEEEECCCCcccCHHHHHHHHHHhC---cCCcEEEeCCCCceehhhHHHHHHHHHHHHHH
Confidence                      0001 1 5789999999999999999999888774   34699999999999887677889999999998


Q ss_pred             hhC
Q psy463          788 CFA  790 (790)
Q Consensus       788 ~l~  790 (790)
                      +|+
T Consensus       215 ~l~  217 (220)
T 2fuk_A          215 WLP  217 (220)
T ss_dssp             GCS
T ss_pred             Hhh
Confidence            874

>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}

Probab=99.81  E-value=4.7e-19  Score=183.64  Aligned_cols=253  Identities=15%  Similarity=0.212  Sum_probs=161.0

Q ss_pred             CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       468 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ...+.+++...+| .+.+.++.|.+     ..+.|+||++||++........|. .+...+....||.|+++|+||++.+
T Consensus        46 ~~~~~~~i~~~~g-~i~~~~~~p~~-----~~~~p~vv~~HGgg~~~g~~~~~~-~~~~~la~~~g~~v~~~d~rg~g~~  118 (311)
T 2c7b_A           46 AETRDVHIPVSGG-SIRARVYFPKK-----AAGLPAVLYYHGGGFVFGSIETHD-HICRRLSRLSDSVVVSVDYRLAPEY  118 (311)
T ss_dssp             SEEEEEEEEETTE-EEEEEEEESSS-----CSSEEEEEEECCSTTTSCCTGGGH-HHHHHHHHHHTCEEEEECCCCTTTS
T ss_pred             ceEEEEEecCCCC-cEEEEEEecCC-----CCCCcEEEEECCCcccCCChhhhH-HHHHHHHHhcCCEEEEecCCCCCCC
Confidence            3567788888778 89999999974     345799999999873211123332 2344444434999999999998765


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDW  622 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~  622 (790)
                      ...           ...+|+.++++++.+...  .+|.++++|+|||+||.+++.++.+++.   ..++++++.+|+.++
T Consensus       119 ~~~-----------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~  187 (311)
T 2c7b_A          119 KFP-----------TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNM  187 (311)
T ss_dssp             CTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCC
T ss_pred             CCC-----------ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCC
Confidence            432           346788888888876211  2567899999999999999999877653   258899999998774


Q ss_pred             ccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          623 IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       623 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                      .......             ...+...         .           +..........+....            ...+
T Consensus       188 ~~~~~~~-------------~~~~~~~---------~-----------~~~~~~~~~~~~~~~~------------~~~~  222 (311)
T 2c7b_A          188 TGVPTAS-------------LVEFGVA---------E-----------TTSLPIELMVWFGRQY------------LKRP  222 (311)
T ss_dssp             SSCCCHH-------------HHHHHHC---------T-----------TCSSCHHHHHHHHHHH------------CSST
T ss_pred             ccccccC-------------CccHHHh---------c-----------cCCCCHHHHHHHHHHh------------CCCC
Confidence            2110000             0000000         0           0000000000011100            0000


Q ss_pred             CcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cchH
Q psy463          703 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRPH  776 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~~  776 (790)
                      .   .............+..+  .|+|+++|+.|..++  .+..+++.++..+.+++++++|+++|.+..      ...+
T Consensus       223 ~---~~~~~~~~p~~~~l~~~--~P~lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~  295 (311)
T 2c7b_A          223 E---EAYDFKASPLLADLGGL--PPALVVTAEYDPLRD--EGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGRE  295 (311)
T ss_dssp             T---GGGSTTTCGGGSCCTTC--CCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHH
T ss_pred             c---cccCcccCcccccccCC--CcceEEEcCCCCchH--HHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHH
Confidence            0   00000000111223444  399999999999886  567788899999999999999999998863      4578


Q ss_pred             HHHHHHHHHHHhhC
Q psy463          777 FYHTLERFLDSCFA  790 (790)
Q Consensus       777 ~~~~i~~fl~~~l~  790 (790)
                      +.+.+.+||+++|+
T Consensus       296 ~~~~i~~fl~~~l~  309 (311)
T 2c7b_A          296 ALDLAAASIRSGLQ  309 (311)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhc
Confidence            89999999998874

>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0

Probab=99.81  E-value=1.3e-19  Score=185.09  Aligned_cols=239  Identities=18%  Similarity=0.211  Sum_probs=151.7

Q ss_pred             EEEEE-cCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcC--CCCCCC
Q psy463          472 YMSVP-IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDG--RNSALK  547 (790)
Q Consensus       472 ~~~~~-~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~--rG~~~~  547 (790)
                      .+++. ...|..+.+.++.|.++.   .+++|+||++||+++..   ..|.. .....+++++||+|+++|+  ||.+..
T Consensus        18 ~~~~~s~~~~~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~---~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~   91 (282)
T 3fcx_A           18 VFEHDSVELNCKMKFAVYLPPKAE---TGKCPALYWLSGLTCTE---QNFISKSGYHQSASEHGLVVIAPDTSPRGCNIK   91 (282)
T ss_dssp             EEEEEETTTTEEEEEEEEECGGGG---TSCEEEEEEECCTTCCS---HHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC-
T ss_pred             EEEEEchhcCCeeEEEEEcCCCCC---CCCCCEEEEEcCCCCCc---cchhhcchHHHHhhcCCeEEEEeccccCccccc
Confidence            34444 346889999999998754   36799999999998763   22221 1112455568999999999  777654


Q ss_pred             hhhhHh------hhhccCCc-------cchhHHH-HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEE
Q psy463          548 GNTLKY------AGYRRLGT-------VEIYDQI-NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCG  613 (790)
Q Consensus       548 g~~~~~------~~~~~~~~-------~~~~D~~-~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~  613 (790)
                      +.....      ..+.....       ....++. +.+.++.++++ +|.+||+|+|+||||++|+.++.++|+ .++++
T Consensus        92 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~  169 (282)
T 3fcx_A           92 GEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFP-VDPQRMSIFGHSMGGHGALICALKNPG-KYKSV  169 (282)
T ss_dssp             -------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSS-EEEEEEEEEEETHHHHHHHHHHHTSTT-TSSCE
T ss_pred             cccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcC-CCccceEEEEECchHHHHHHHHHhCcc-cceEE
Confidence            432100      00000000       1122233 44445554455 788999999999999999999998885 89999


Q ss_pred             EEeCCCCCcccccc--cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCc
Q psy463          614 ISVAPVTDWIYYDT--IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI  691 (790)
Q Consensus       614 v~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~  691 (790)
                      ++.+|+.+......  .....+++..                                                      
T Consensus       170 v~~s~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------  195 (282)
T 3fcx_A          170 SAFAPICNPVLCPWGKKAFSGYLGTD------------------------------------------------------  195 (282)
T ss_dssp             EEESCCCCGGGSHHHHHHHHHHHC--------------------------------------------------------
T ss_pred             EEeCCccCcccCchhHHHHHHhcCCc------------------------------------------------------
Confidence            99999866431000  0000000000                                                      


Q ss_pred             chhcccccCCCCcCCcchhhhhhhhh---hhhhccCCccEEEEecCCCcccchhh--hHHHHHHHHhcCCceEEEEcCCC
Q psy463          692 MFQSQRYMGLPTFEDNLEGYKIAALN---NKVDRIRDKQYLLVHGTMDDNVHFQQ--SMMLAKSLQHADIMFQSQTYPDE  766 (790)
Q Consensus       692 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~P~Lii~G~~D~~v~~~~--~~~l~~~l~~~g~~~~~~~~p~~  766 (790)
                                      ...+...++.   ..+.++ .+|+|++||+.|..+|...  ++.+++.|++++.++++.++|++
T Consensus       196 ----------------~~~~~~~~~~~~~~~~~~~-~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~g~  258 (282)
T 3fcx_A          196 ----------------QSKWKAYDATHLVKSYPGS-QLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEDY  258 (282)
T ss_dssp             -----------------CCGGGGCHHHHHTTCC----CCEEEEEETTCHHHHTTSSCHHHHHHHHHHTTCCEEEEEETTC
T ss_pred             ----------------hhhhhhcCHHHHHHhcccC-CCcEEEEcCCCCcccccchhhHHHHHHHHHHcCCceEEEECCCC
Confidence                            0001111111   223344 7999999999999997665  56999999999999999999999


Q ss_pred             CCcCCCcchHHHHHHHHHHHHhhC
Q psy463          767 EHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       767 ~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      +|.+. ....++...+.|+.++|+
T Consensus       259 ~H~~~-~~~~~~~~~~~~~~~~l~  281 (282)
T 3fcx_A          259 DHSYY-FIATFITDHIRHHAKYLN  281 (282)
T ss_dssp             CSSHH-HHHHHHHHHHHHHHHHTT
T ss_pred             CcCHH-HHHhhhHHHHHHHHHhhc
Confidence            99876 355677788888888774

>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}

Probab=99.81  E-value=6.5e-19  Score=189.42  Aligned_cols=266  Identities=18%  Similarity=0.116  Sum_probs=161.8

Q ss_pred             CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       468 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ...+.+.++. +|..+.++++.+      ...+.|+||++||+.+..   ..|.......++ ++||.|+++|+||+|.+
T Consensus       133 ~~~~~~~i~~-~~~~l~~~~~~~------~~~~~p~vv~~HG~~~~~---~~~~~~~~~~~~-~~g~~vi~~D~~G~G~s  201 (405)
T 3fnb_A          133 IPLKSIEVPF-EGELLPGYAIIS------EDKAQDTLIVVGGGDTSR---EDLFYMLGYSGW-EHDYNVLMVDLPGQGKN  201 (405)
T ss_dssp             CCCEEEEEEE-TTEEEEEEEECC------SSSCCCEEEEECCSSCCH---HHHHHHTHHHHH-HTTCEEEEECCTTSTTG
T ss_pred             CCcEEEEEeE-CCeEEEEEEEcC------CCCCCCEEEEECCCCCCH---HHHHHHHHHHHH-hCCcEEEEEcCCCCcCC
Confidence            3456777777 688999988843      234569999999987652   233221222333 48999999999998765


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT  627 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~  627 (790)
                      ...   .  .........|+.++++++.. .+    .+|+|+|||+||++++.++.++|  +++++|+.+|+.++.....
T Consensus       202 ~~~---~--~~~~~~~~~d~~~~~~~l~~-~~----~~v~l~G~S~GG~~a~~~a~~~p--~v~~~v~~~p~~~~~~~~~  269 (405)
T 3fnb_A          202 PNQ---G--LHFEVDARAAISAILDWYQA-PT----EKIAIAGFSGGGYFTAQAVEKDK--RIKAWIASTPIYDVAEVFR  269 (405)
T ss_dssp             GGG---T--CCCCSCTHHHHHHHHHHCCC-SS----SCEEEEEETTHHHHHHHHHTTCT--TCCEEEEESCCSCHHHHHH
T ss_pred             CCC---C--CCCCccHHHHHHHHHHHHHh-cC----CCEEEEEEChhHHHHHHHHhcCc--CeEEEEEecCcCCHHHHHH
Confidence            322   1  11222346777777777655 22    78999999999999999999887  7999999999887643211


Q ss_pred             cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc
Q psy463          628 IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN  707 (790)
Q Consensus       628 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  707 (790)
                      ......+..+      ....        .     .++....    .........+.......+..          .....
T Consensus       270 ~~~~~~~~~p------~~~~--------~-----~~~~~~~----~~~~~~~~~~~~~~~~~~~~----------~~~~~  316 (405)
T 3fnb_A          270 ISFSTALKAP------KTIL--------K-----WGSKLVT----SVNKVAEVNLNKYAWQFGQV----------DFITS  316 (405)
T ss_dssp             HHCC-----------------------------------------CCCHHHHHHHHHHHHHHTSS----------SHHHH
T ss_pred             HhhhhhhhCc------HHHH--------H-----HHHHHhh----ccchhHHHHHHHhhhhcCCC----------CHHHH
Confidence            1000110111      0000        0     0000000    00000000000000000000          00000


Q ss_pred             chhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCc---CCC-cchHHHHHHHH
Q psy463          708 LEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHG---LIG-VRPHFYHTLER  783 (790)
Q Consensus       708 ~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~---~~~-~~~~~~~~i~~  783 (790)
                      ...+........+.++ ++|+|++||++|..+|+.++..+++.++..+.+++++++++..|.   ... .+..+.+.|.+
T Consensus       317 ~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~  395 (405)
T 3fnb_A          317 VNEVLEQAQIVDYNKI-DVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFE  395 (405)
T ss_dssp             HHHHHHHCCCCCGGGC-CSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHH
T ss_pred             HHHHHHhhcccCHhhC-CCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHH
Confidence            0111111121336788 999999999999999999999999999999889999999766655   333 77889999999


Q ss_pred             HHHHhhC
Q psy463          784 FLDSCFA  790 (790)
Q Consensus       784 fl~~~l~  790 (790)
                      ||+++|+
T Consensus       396 fL~~~l~  402 (405)
T 3fnb_A          396 WLNHIFK  402 (405)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            9999874

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.81  E-value=1.8e-17  Score=178.82  Aligned_cols=291  Identities=11%  Similarity=0.098  Sum_probs=195.0

Q ss_pred             ceeEEEEeeC--CCCeeeEEEeecCCCCccccC----C-------ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEE
Q psy463           81 NRARITRCSI--NEGTCDVVFSRDLDRGWFEPF----D-------HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTF  147 (790)
Q Consensus        81 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~-------~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~  147 (790)
                      ....+.+++.  .++++...........++...    .       .....+.+++|+|.+.....   .+    ...|++
T Consensus        91 ~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~---~~----~~~i~i  163 (415)
T 2hqs_A           91 YNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGG---QF----PYELRV  163 (415)
T ss_dssp             EEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSS---SC----CEEEEE
T ss_pred             EEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCC---Cc----cceEEE
Confidence            3456788998  888755322222222222100    0       00112348889998864321   00    148999


Q ss_pred             EEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccc
Q psy463          148 IDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR  227 (790)
Q Consensus       148 ~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~  227 (790)
                      +|++++.      ...++.+...+. -..|+|+++. ++|.+...         ....|+++|+++++      ...++ 
T Consensus       164 ~d~~g~~------~~~l~~~~~~v~-~~~~Spdg~~-la~~s~~~---------~~~~i~~~d~~tg~------~~~l~-  219 (415)
T 2hqs_A          164 SDYDGYN------QFVVHRSPQPLM-SPAWSPDGSK-LAYVTFES---------GRSALVIQTLANGA------VRQVA-  219 (415)
T ss_dssp             EETTSCS------CEEEEEESSCEE-EEEECTTSSE-EEEEECTT---------SSCEEEEEETTTCC------EEEEE-
T ss_pred             EcCCCCC------CEEEeCCCCcce-eeEEcCCCCE-EEEEEecC---------CCcEEEEEECCCCc------EEEee-
Confidence            9997653      455555544443 3578887764 56655321         12589999999886      33444 


Q ss_pred             cccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccC
Q psy463          228 GRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD  307 (790)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spD  307 (790)
                                      ........++|||||+.++++....+...|+++|+.+++++.++....      ....+.||||
T Consensus       220 ----------------~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~------~~~~~~~spd  277 (415)
T 2hqs_A          220 ----------------SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS------NNTEPTWFPD  277 (415)
T ss_dssp             ----------------CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS------CEEEEEECTT
T ss_pred             ----------------cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC------cccceEECCC
Confidence                            445567899999999966655443445679999999998876654321      1347999999


Q ss_pred             CCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEE
Q psy463          308 GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMY  387 (790)
Q Consensus       308 g~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~  387 (790)
                      |+.|++...    .+|      ..+||++|+.+++      .+.++.....+.. +.|+|||+.|++.+....  ...|+
T Consensus       278 g~~l~~~s~----~~g------~~~i~~~d~~~~~------~~~l~~~~~~~~~-~~~spdG~~l~~~~~~~g--~~~i~  338 (415)
T 2hqs_A          278 SQNLAFTSD----QAG------RPQVYKVNINGGA------PQRITWEGSQNQD-ADVSSDGKFMVMVSSNGG--QQHIA  338 (415)
T ss_dssp             SSEEEEEEC----TTS------SCEEEEEETTSSC------CEECCCSSSEEEE-EEECTTSSEEEEEEECSS--CEEEE
T ss_pred             CCEEEEEEC----CCC------CcEEEEEECCCCC------EEEEecCCCcccC-eEECCCCCEEEEEECcCC--ceEEE
Confidence            999986543    455      5689999999887      6777665444444 899999999999887622  27899


Q ss_pred             EEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEec
Q psy463          388 RINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       388 ~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  453 (790)
                      .+++.+  ++.+.++.       . .....+.|||||+++++.....+...|++++++++..+.++
T Consensus       339 ~~d~~~--~~~~~l~~-------~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~  394 (415)
T 2hqs_A          339 KQDLAT--GGVQVLSS-------T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP  394 (415)
T ss_dssp             EEETTT--CCEEECCC-------S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred             EEECCC--CCEEEecC-------C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence            999987  56555554       2 26778999999999999877666678999999887666654

>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*

Probab=99.81  E-value=1.6e-18  Score=182.81  Aligned_cols=247  Identities=12%  Similarity=0.056  Sum_probs=154.9

Q ss_pred             CCcEEEEEEEeCCCCCC------------CCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcCCCCC
Q psy463          479 PNMEAQVKLFLPPGIDT------------SGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDGRNSA  545 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~------------~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~rG~~  545 (790)
                      ++..+.+.+|.|.+...            ...++.|+||++||+++.......... .+...++.+.||.|+++|+||++
T Consensus        79 ~~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~  158 (351)
T 2zsh_A           79 RRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAP  158 (351)
T ss_dssp             TTTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTT
T ss_pred             CCCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCC
Confidence            46668888999976310            013568999999998764321222111 23344443579999999999976


Q ss_pred             CChhhhHhhhhccCCccchhHHHHHHHHHHHhCC----CcCCC-ceEEEEechHHHHHHHHHhcCCCC--ceEEEEEeCC
Q psy463          546 LKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP----YIDKT-RTAIWGWSYGGYATGLALALDPSN--VFKCGISVAP  618 (790)
Q Consensus       546 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~----~~d~~-ri~i~G~S~GG~~a~~~a~~~p~~--~~~~~v~~~~  618 (790)
                      .+...           ..++|+.++++|+.+ ..    .+|.+ ||+|+|||+||.+++.++.+++..  .++++++.+|
T Consensus       159 ~~~~~-----------~~~~D~~~~~~~l~~-~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p  226 (351)
T 2zsh_A          159 ENPYP-----------CAYDDGWIALNWVNS-RSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNP  226 (351)
T ss_dssp             TSCTT-----------HHHHHHHHHHHHHHT-CGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESC
T ss_pred             CCCCc-----------hhHHHHHHHHHHHHh-CchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECC
Confidence            54322           347899999999987 32    47888 999999999999999999877642  6899999999


Q ss_pred             CCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccc
Q psy463          619 VTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY  698 (790)
Q Consensus       619 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~  698 (790)
                      +.+........ ....+.+                                   .........+..........      
T Consensus       227 ~~~~~~~~~~~-~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~------  264 (351)
T 2zsh_A          227 MFGGNERTESE-KSLDGKY-----------------------------------FVTVRDRDWYWKAFLPEGED------  264 (351)
T ss_dssp             CCCCSSCCHHH-HHHTTTS-----------------------------------SCCHHHHHHHHHHHSCTTCC------
T ss_pred             ccCCCcCChhh-hhcCCCc-----------------------------------ccCHHHHHHHHHHhCCCCCC------
Confidence            76533110000 0000000                                   00000011111111000000      


Q ss_pred             cCCCCcCCcchhhhhhhhhhhhhccCCc-cEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----
Q psy463          699 MGLPTFEDNLEGYKIAALNNKVDRIRDK-QYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----  772 (790)
Q Consensus       699 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----  772 (790)
                      ...+..    ....  .....++++ .+ |+|++||++|..++  .+..+++.|++.+.+++++++++++|.+..     
T Consensus       265 ~~~~~~----~~~~--~~~~~l~~i-~~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~  335 (351)
T 2zsh_A          265 REHPAC----NPFS--PRGKSLEGV-SFPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNN  335 (351)
T ss_dssp             TTSTTT----CTTS--TTSCCCTTC-CCCEEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSH
T ss_pred             CCCccc----CCCC--CCccchhhC-CCCCEEEEEcCCCcchH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCH
Confidence            000000    0000  001334555 55 99999999999876  678899999999999999999999998764     


Q ss_pred             cchHHHHHHHHHHHHh
Q psy463          773 VRPHFYHTLERFLDSC  788 (790)
Q Consensus       773 ~~~~~~~~i~~fl~~~  788 (790)
                      ..+++++.+.+||+++
T Consensus       336 ~~~~~~~~i~~Fl~~~  351 (351)
T 2zsh_A          336 HFHNVMDEISAFVNAE  351 (351)
T ss_dssp             HHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHhcCC
Confidence            5678899999999764

>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A

Probab=99.81  E-value=6.1e-19  Score=185.07  Aligned_cols=253  Identities=17%  Similarity=0.128  Sum_probs=156.5

Q ss_pred             EEEEEcCCCcEEEEEEEeCCCC-CCCCCCCccEEEEEcCCCCccccccc--cccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          472 YMSVPIQPNMEAQVKLFLPPGI-DTSGHKKYPLLIHVYGGPSSFQVTER--FSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       472 ~~~~~~~dg~~i~~~~~~P~~~-~~~~~~~~p~vv~~HG~~~~~~~~~~--~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      .+.+.  .+..+.+.+|.|.+. .  ..++.|+||++||++........  |. .+...++.+.||.|+++|+||++.+.
T Consensus        57 ~v~~~--~~~~~~~~~~~P~~~~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~-~~~~~la~~~g~~vv~~d~rg~~~~~  131 (338)
T 2o7r_A           57 DLALN--PLHNTFVRLFLPRHALY--NSAKLPLVVYFHGGGFILFSAASTIFH-DFCCEMAVHAGVVIASVDYRLAPEHR  131 (338)
T ss_dssp             EEEEE--TTTTEEEEEEEEGGGGG--SSCCEEEEEEECCSTTTSCCTTBHHHH-HHHHHHHHHHTCEEEEEECCCTTTTC
T ss_pred             EEEec--CCCCeEEEEEeCCCCCc--CCCCceEEEEEcCCcCcCCCCCchhHH-HHHHHHHHHCCcEEEEecCCCCCCCC
Confidence            34444  356678888888753 2  34678999999998854321121  22 23444543579999999999976543


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCC-----CcCCCceEEEEechHHHHHHHHHhcCCC-------CceEEEEEe
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLP-----YIDKTRTAIWGWSYGGYATGLALALDPS-------NVFKCGISV  616 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~-----~~d~~ri~i~G~S~GG~~a~~~a~~~p~-------~~~~~~v~~  616 (790)
                      ..           ..++|+.++++|+.++..     .+|.++++|+|||+||.+++.++.++|.       ..++++|+.
T Consensus       132 ~~-----------~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~  200 (338)
T 2o7r_A          132 LP-----------AAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLD  200 (338)
T ss_dssp             TT-----------HHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEE
T ss_pred             Cc-----------hHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEE
Confidence            22           347899999999987211     2567899999999999999999988764       279999999


Q ss_pred             CCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcc
Q psy463          617 APVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQ  696 (790)
Q Consensus       617 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~  696 (790)
                      +|+.+......... ....                                   +...+......+.......+..    
T Consensus       201 ~p~~~~~~~~~~~~-~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~----  240 (338)
T 2o7r_A          201 EPGFGGSKRTGSEL-RLAN-----------------------------------DSRLPTFVLDLIWELSLPMGAD----  240 (338)
T ss_dssp             SCCCCCSSCCHHHH-HTTT-----------------------------------CSSSCHHHHHHHHHHHSCTTCC----
T ss_pred             CCccCCCcCChhhh-ccCC-----------------------------------CcccCHHHHHHHHHHhCCCCCC----
Confidence            99765432100000 0000                                   0000000011111110000000    


Q ss_pred             cccCCCCcCCcchhhhhhh---hhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-
Q psy463          697 RYMGLPTFEDNLEGYKIAA---LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-  772 (790)
Q Consensus       697 ~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-  772 (790)
                        ...+.....    ...+   .+..+.++ .+|+|+++|++|..++  .+..+++.|++.+.+++++++++++|.+.. 
T Consensus       241 --~~~~~~~~~----~~~~~~~~~~~l~~~-~~P~Lvi~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~  311 (338)
T 2o7r_A          241 --RDHEYCNPT----AESEPLYSFDKIRSL-GWRVMVVGCHGDPMID--RQMELAERLEKKGVDVVAQFDVGGYHAVKLE  311 (338)
T ss_dssp             --TTSTTTCCC--------CCTHHHHHHHH-TCEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEESSCCTTGGGT
T ss_pred             --CCCcccCCC----CCCcccccHhhhcCC-CCCEEEEECCCCcchH--HHHHHHHHHHHCCCcEEEEEECCCceEEecc
Confidence              000000000    0000   11334556 6799999999999887  567889999999999999999999998865 


Q ss_pred             cc---hHHHHHHHHHHHHhh
Q psy463          773 VR---PHFYHTLERFLDSCF  789 (790)
Q Consensus       773 ~~---~~~~~~i~~fl~~~l  789 (790)
                      +.   +++++.+.+||++++
T Consensus       312 ~~~~~~~~~~~i~~Fl~~~~  331 (338)
T 2o7r_A          312 DPEKAKQFFVILKKFVVDSC  331 (338)
T ss_dssp             CHHHHHHHHHHHHHHHC---
T ss_pred             ChHHHHHHHHHHHHHHHhhc
Confidence            33   789999999998765

>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0

Probab=99.80  E-value=6.9e-19  Score=179.17  Aligned_cols=241  Identities=15%  Similarity=0.187  Sum_probs=157.5

Q ss_pred             EEEEEE-cCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          471 EYMSVP-IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       471 ~~~~~~-~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      +.+++. ...|..+.+.++.|.++.   .+++|+||++||+++..   ..|.. .....++++.||.|+++|++|.|...
T Consensus        16 ~~~~~~s~~~g~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~---~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~   89 (278)
T 3e4d_A           16 GVFSHQSETLKSEMTFAVYVPPKAI---HEPCPVVWYLSGLTCTH---ANVMEKGEYRRMASELGLVVVCPDTSPRGNDV   89 (278)
T ss_dssp             EEEEEEETTTTEEEEEEEEECGGGG---TSCEEEEEEECCTTCCS---HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTS
T ss_pred             EEEEEeccccCCcceEEEEcCCCCC---CCCCCEEEEEcCCCCCc---cchhhcccHHHHHhhCCeEEEecCCcccCccc
Confidence            444554 346889999999998642   56789999999988763   22321 11334555579999999999876432


Q ss_pred             hhh----H----hhhhccC------CccchhHH-H-HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEE
Q psy463          549 NTL----K----YAGYRRL------GTVEIYDQ-I-NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKC  612 (790)
Q Consensus       549 ~~~----~----~~~~~~~------~~~~~~D~-~-~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~  612 (790)
                      ...    .    ...+...      ......+. . +.++++.+.++ +|.++++|+||||||.+++.++.++|+ .+++
T Consensus        90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~  167 (278)
T 3e4d_A           90 PDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFR-ADMSRQSIFGHSMGGHGAMTIALKNPE-RFKS  167 (278)
T ss_dssp             CCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSC-EEEEEEEEEEETHHHHHHHHHHHHCTT-TCSC
T ss_pred             ccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcC-CCcCCeEEEEEChHHHHHHHHHHhCCc-ccce
Confidence            110    0    0000000      00111222 2 35556665344 777899999999999999999999885 8999


Q ss_pred             EEEeCCCCCcccccc--cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcC
Q psy463          613 GISVAPVTDWIYYDT--IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD  690 (790)
Q Consensus       613 ~v~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~  690 (790)
                      +++.+|+.+......  .....+++.                                                      
T Consensus       168 ~v~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------  193 (278)
T 3e4d_A          168 CSAFAPIVAPSSADWSEPALEKYLGA------------------------------------------------------  193 (278)
T ss_dssp             EEEESCCSCGGGCTTTHHHHHHHHCS------------------------------------------------------
T ss_pred             EEEeCCcccccCCccchhhHHHhcCC------------------------------------------------------
Confidence            999999876432100  000000000                                                      


Q ss_pred             cchhcccccCCCCcCCcchhhhhhhhhhhhhccC-CccEEEEecCCCcccchhh-hHHHHHHHHhcCCceEEEEcCCCCC
Q psy463          691 IMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQQ-SMMLAKSLQHADIMFQSQTYPDEEH  768 (790)
Q Consensus       691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~g~~~~~~~~p~~~H  768 (790)
                                      ....+...++...+++++ .+|+|++||+.|..++.+. +..+.+.|++.|.++++.++||++|
T Consensus       194 ----------------~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H  257 (278)
T 3e4d_A          194 ----------------DRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIGLTLRMHDRYDH  257 (278)
T ss_dssp             ----------------CGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSCEEEEEEETTCCS
T ss_pred             ----------------cHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHHcCCCceEEEeCCCCc
Confidence                            001112222323444442 4699999999999998643 7899999999999999999999999


Q ss_pred             cCCCcchHHHHHHHHHHHHhhC
Q psy463          769 GLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       769 ~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      .+. .....+..+++|+.++|+
T Consensus       258 ~~~-~~~~~~~~~l~~~~~~l~  278 (278)
T 3e4d_A          258 SYY-FISTFMDDHLKWHAERLG  278 (278)
T ss_dssp             SHH-HHHHHHHHHHHHHHHHHC
T ss_pred             CHH-HHHHHHHHHHHHHHHhcC
Confidence            875 355677888899998875

>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A

Probab=99.80  E-value=6.4e-19  Score=179.61  Aligned_cols=244  Identities=15%  Similarity=0.176  Sum_probs=159.4

Q ss_pred             eEEEEEEc-CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          470 VEYMSVPI-QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       470 ~~~~~~~~-~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      .+.+++.+ .+|..+.+.++.|.++.  ..+++|+||++||+++..   ..|.. .....++++.|++|+++|.++.+..
T Consensus        17 ~~~~~~~s~~~g~~~~~~v~~P~~~~--~~~~~p~vv~lHG~~~~~---~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~   91 (280)
T 3i6y_A           17 HKQYSHVSNTLNCAMRFAIYLPPQAS--TGAKVPVLYWLSGLTCSD---ENFMQKAGAQRLAAELGIAIVAPDTSPRGEG   91 (280)
T ss_dssp             EEEEEEEETTTTEEEEEEEEECGGGG--TTCCEEEEEEECCTTCCS---SHHHHHSCCHHHHHHHTCEEEEECSSCCSTT
T ss_pred             EEEEEEeccccCCeeEEEEEeCCCCC--CCCCccEEEEecCCCCCh---hHHhhcccHHHHHhhCCeEEEEeCCcccccc
Confidence            34455544 46889999999999765  567899999999988763   22321 1133455567999999998754321


Q ss_pred             h-----------hhh-HhhhhccC-CccchhH-H-HHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEE
Q psy463          548 G-----------NTL-KYAGYRRL-GTVEIYD-Q-INVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKC  612 (790)
Q Consensus       548 g-----------~~~-~~~~~~~~-~~~~~~D-~-~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~  612 (790)
                      .           ..+ .......+ ......+ + .+.+.++.+.+. + .+|++|+|||+||++++.++.++|+ .+++
T Consensus        92 ~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~  168 (280)
T 3i6y_A           92 VADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFP-V-SDKRAIAGHSMGGHGALTIALRNPE-RYQS  168 (280)
T ss_dssp             CCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSS-E-EEEEEEEEETHHHHHHHHHHHHCTT-TCSC
T ss_pred             cCcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCC-C-CCCeEEEEECHHHHHHHHHHHhCCc-cccE
Confidence            0           000 00000000 0001122 2 234445545344 3 5799999999999999999999885 8999


Q ss_pred             EEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc
Q psy463          613 GISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM  692 (790)
Q Consensus       613 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~  692 (790)
                      +++.+|+.+.....  +...                                                 ......  +  
T Consensus       169 ~v~~s~~~~~~~~~--~~~~-------------------------------------------------~~~~~~--~--  193 (280)
T 3i6y_A          169 VSAFSPINNPVNCP--WGQK-------------------------------------------------AFTAYL--G--  193 (280)
T ss_dssp             EEEESCCCCGGGSH--HHHH-------------------------------------------------HHHHHH--C--
T ss_pred             EEEeCCccccccCc--hHHH-------------------------------------------------HHHHhc--C--
Confidence            99999976643110  0000                                                 000000  0  


Q ss_pred             hhcccccCCCCcCCcchhhhhhhhhhhhhccC-CccEEEEecCCCcccchhh-hHHHHHHHHhcCCceEEEEcCCCCCcC
Q psy463          693 FQSQRYMGLPTFEDNLEGYKIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQQ-SMMLAKSLQHADIMFQSQTYPDEEHGL  770 (790)
Q Consensus       693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~g~~~~~~~~p~~~H~~  770 (790)
                                   .....|...++...+++++ .+|+|++||+.|..++.+. ++.+++.|++.|+++++.++||++|.+
T Consensus       194 -------------~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~  260 (280)
T 3i6y_A          194 -------------KDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSY  260 (280)
T ss_dssp             -------------SCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSH
T ss_pred             -------------CchHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccH
Confidence                         0011222333445566663 4899999999999999765 899999999999999999999999987


Q ss_pred             CCcchHHHHHHHHHHHHhhC
Q psy463          771 IGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       771 ~~~~~~~~~~i~~fl~~~l~  790 (790)
                      . ....+...+++|+.++|+
T Consensus       261 ~-~~~~~~~~~l~~~~~~l~  279 (280)
T 3i6y_A          261 Y-FIASFIEDHLRFHSNYLN  279 (280)
T ss_dssp             H-HHHHHHHHHHHHHHHHHT
T ss_pred             H-HHHHhHHHHHHHHHhhcc
Confidence            5 355677888899998874

>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}

Probab=99.80  E-value=1.2e-18  Score=185.30  Aligned_cols=291  Identities=12%  Similarity=0.045  Sum_probs=166.4

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+++...||..+.++++.|.+ .  +.++.|+||++||+++..   ..|...+. ..++++||.|+.+|+||+|.+.
T Consensus        67 ~~~~~~~~~~~g~~~~~~~~~p~~-~--~~~~~p~vv~~hG~~~~~---~~~~~~~~-~~l~~~G~~v~~~d~~g~g~s~  139 (367)
T 2hdw_A           67 EHRKVTFANRYGITLAADLYLPKN-R--GGDRLPAIVIGGPFGAVK---EQSSGLYA-QTMAERGFVTLAFDPSYTGESG  139 (367)
T ss_dssp             EEEEEEEECTTSCEEEEEEEEESS-C--CSSCEEEEEEECCTTCCT---TSHHHHHH-HHHHHTTCEEEEECCTTSTTSC
T ss_pred             eeEEEEEecCCCCEEEEEEEeCCC-C--CCCCCCEEEEECCCCCcc---hhhHHHHH-HHHHHCCCEEEEECCCCcCCCC
Confidence            356778888889999999999986 2  356789999999988752   23322233 3444589999999999987544


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~  628 (790)
                      .....   .......+.|+.++++++.+ .+.+|..+++|+|||+||.+++.++.++|  .++++++.+|........  
T Consensus       140 ~~~~~---~~~~~~~~~d~~~~~~~l~~-~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~~~~v~~~p~~~~~~~~--  211 (367)
T 2hdw_A          140 GQPRN---VASPDINTEDFSAAVDFISL-LPEVNRERIGVIGICGWGGMALNAVAVDK--RVKAVVTSTMYDMTRVMS--  211 (367)
T ss_dssp             CSSSS---CCCHHHHHHHHHHHHHHHHH-CTTEEEEEEEEEEETHHHHHHHHHHHHCT--TCCEEEEESCCCHHHHHH--
T ss_pred             CcCcc---ccchhhHHHHHHHHHHHHHh-CcCCCcCcEEEEEECHHHHHHHHHHhcCC--CccEEEEeccccccHHHh--
Confidence            22110   00112457899999999988 66678889999999999999999999887  688999888763211000  


Q ss_pred             chhhhcCCCCccCchhhhh---hccccchhhhccCCcEEEE---eecCCCccChhhHHHHHHHHHhc-CcchhcccccCC
Q psy463          629 YSERYMGLPTFEDNLEGYK---IAALNNKVDRIRDKQYLLV---HGTMDDNVHFQQSMMLAKSLQHA-DIMFQSQRYMGL  701 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~p~l~~---~g~~d~~v~~~~~~~l~~~l~~~-~~~~~~~~~~~~  701 (790)
                        ..+...   .. .....   ..........+........   ....+ ..+ ............. +........ ..
T Consensus       212 --~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~  282 (367)
T 2hdw_A          212 --KGYNDS---VT-LEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKG-GEA-QFLVDYHDYYMTPRGYHPRAVNS-GN  282 (367)
T ss_dssp             --HTTTTC---CC-HHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCS-CCC-HHHHHHHHHHTSTTTCCTTCSTT-TC
T ss_pred             --hhhccc---cc-hHHHHHHHHHHHHHHHHHhccCCceeecCCCcccc-ccc-cccCCccceeecccccCcccccc-cc
Confidence              000000   00 00000   0000000000000000000   00000 000 0001111111100 000000000 00


Q ss_pred             CCcCCcchhhhhhhhhhhhhccCC-ccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cch-HHH
Q psy463          702 PTFEDNLEGYKIAALNNKVDRIRD-KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRP-HFY  778 (790)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~i~~-~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~-~~~  778 (790)
                      .........+...++...+.++ + +|+|++||++|.  ++..++++++.   .+.+++++++|+++|.... ... .+.
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~i-~~~PvLii~G~~D~--~~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~~  356 (367)
T 2hdw_A          283 AWTMTTPLSFMNMPILTYIKEI-SPRPILLIHGERAH--SRYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIPF  356 (367)
T ss_dssp             CCBTTTHHHHTTSCSCTTGGGG-TTSCEEEEEETTCT--THHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSCH
T ss_pred             hhhhhhHHHhcCCChhHhHHhh-cCCceEEEecCCCC--CHHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHHH
Confidence            0000111222333445677888 8 999999999998  77777777765   5678899999999998553 222 268


Q ss_pred             HHHHHHHHHhh
Q psy463          779 HTLERFLDSCF  789 (790)
Q Consensus       779 ~~i~~fl~~~l  789 (790)
                      +.+.+||+++|
T Consensus       357 ~~i~~fl~~~l  367 (367)
T 2hdw_A          357 DRIAGFFDEHL  367 (367)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHhhC
Confidence            99999999876

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.80  E-value=8.6e-19  Score=204.28  Aligned_cols=246  Identities=24%  Similarity=0.369  Sum_probs=167.9

Q ss_pred             CccceeecCCceeEeCCCCCceEEEEecCCceeEEEecccCC------------------CCCCCc------CC---C--
Q psy463            1 MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGN------------------PGHPSS------QY---T--   51 (790)
Q Consensus         1 ~~~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~------------------~~~~~~------~~---~--   51 (790)
                      +|+||+++...+++|||||++|||++.+++.+.+|.++..+.                  .+..+.      ..   .  
T Consensus       164 v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~  243 (740)
T 4a5s_A          164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN  243 (740)
T ss_dssp             HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred             cccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence            488999999999999999999999998887666665544332                  211110      00   0  


Q ss_pred             -ccccC--------CCCccccccCCCcce-eEeeeecccceeEEEEeeCCCCe----eeEEEee--cCCCCcccc--CCc
Q psy463           52 -QAINL--------REPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGT----CDVVFSR--DLDRGWFEP--FDH  113 (790)
Q Consensus        52 -~~~~~--------~~~~~~~~~w~~~~~-~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~--~~~  113 (790)
                       ...++        +......+.|++|++ .+.+++|.++...+.+|+..+++    |..+...  +...+|++.  ...
T Consensus       244 ~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~  323 (740)
T 4a5s_A          244 ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSE  323 (740)
T ss_dssp             CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCC
T ss_pred             ceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCC
Confidence             11122        233445678999888 56789999999999999998887    6644322  456678864  457


Q ss_pred             cccccCCceEE-EEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          114 LRFSSDGKKML-LILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       114 ~~~spdg~~i~-~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      |+|||||+.|+ +.+.+.+          +.|||+++++++.      ..+||.|.+++..+..+|  + +.|+|.+...
T Consensus       324 p~fspDG~~l~~~~s~~~G----------~~~l~~~~~~~~~------~~~lT~g~~~v~~~~~~d--~-~~i~f~~~~~  384 (740)
T 4a5s_A          324 PHFTLDGNSFYKIISNEEG----------YRHICYFQIDKKD------CTFITKGTWEVIGIEALT--S-DYLYYISNEY  384 (740)
T ss_dssp             CEECTTSSEEEEEEECTTS----------CEEEEEEETTCSS------CEESCCSSSCEEEEEEEC--S-SEEEEEESCG
T ss_pred             ceEcCCCCEEEEEEEcCCC----------ceEEEEEECCCCc------eEecccCCEEEEEEEEEe--C-CEEEEEEecC
Confidence            99999999998 4443332          5699999998874      689999999999998887  3 3377766531


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                      ..+     +...+||++++++++.+     ..||.+             ..........++|||||+.+.+.....+.+.
T Consensus       385 ~~~-----~~~~~ly~v~~~g~~~~-----~~lt~~-------------~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~  441 (740)
T 4a5s_A          385 KGM-----PGGRNLYKIQLIDYTKV-----TCLSCE-------------LNPERCQYYSVSFSKEAKYYQLRCSGPGLPL  441 (740)
T ss_dssp             GGC-----TTCBEEEEEETTEEEEE-----EESSTT-------------TSTTTBCBEEEEECTTSSEEEEEECSBSSCE
T ss_pred             CCC-----CceeEEEEEECCCCCcc-----eeeccc-------------cCCCCCceEEEEECCCCCEEEEEeCCCCCCE
Confidence            011     12379999999887531     134400             0012345678999999995444433334667


Q ss_pred             EEEEECCCCceeEEEE
Q psy463          273 ITRCSINEGTCDVVFS  288 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~  288 (790)
                      +++++..+++...++.
T Consensus       442 ~~l~~~~~~~~~~~l~  457 (740)
T 4a5s_A          442 YTLHSSVNDKGLRVLE  457 (740)
T ss_dssp             EEEEETTTTEEEEEEE
T ss_pred             EEEEECCCCcEEEEec
Confidence            9999988887655554

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.80  E-value=1.7e-17  Score=177.73  Aligned_cols=266  Identities=14%  Similarity=0.144  Sum_probs=173.5

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+|||||++|+|.+..++          ..+||++++++++      ..+++.+......-..|+|+++. ++|.+..
T Consensus        39 ~~~~~SpDg~~l~~~~~~~g----------~~~l~~~d~~~g~------~~~lt~~~~~~~~~~~~spdg~~-l~~~~~~  101 (388)
T 3pe7_A           39 YQKCFTRDGSKLLFGGAFDG----------PWNYYLLDLNTQV------ATQLTEGRGDNTFGGFLSPDDDA-LFYVKDG  101 (388)
T ss_dssp             TSCCBCTTSCEEEEEECTTS----------SCEEEEEETTTCE------EEECCCSSCBCSSSCEECTTSSE-EEEEETT
T ss_pred             cCccCCCCCCEEEEEEcCCC----------CceEEEEeCCCCc------eEEeeeCCCCCccceEEcCCCCE-EEEEeCC
Confidence            35899999999999886333          2289999998875      56777664332212357887764 6665531


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEE--EEccCCcEEEEEe-c--
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRV--NWANESVVAAWVN-R--  266 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~--~wspDg~~~~~~~-r--  266 (790)
                                  ..||++|+++++.      ..+..                .........  .++|||+.++... .  
T Consensus       102 ------------~~l~~~d~~~g~~------~~~~~----------------~~~~~~~~~~~~~~~dg~~l~~~~~~~~  147 (388)
T 3pe7_A          102 ------------RNLMRVDLATLEE------NVVYQ----------------VPAEWVGYGTWVANSDCTKLVGIEIRRE  147 (388)
T ss_dssp             ------------TEEEEEETTTCCE------EEEEE----------------CCTTEEEEEEEEECTTSSEEEEEEEEGG
T ss_pred             ------------CeEEEEECCCCcc------eeeee----------------chhhcccccceeECCCCCeeccccccCc
Confidence                        5899999999873      22220                122333333  3489999444322 1  


Q ss_pred             ----------------cCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEcc-CCCEEEEEEccccccCCCCCcCc
Q psy463          267 ----------------VQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS-DGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       267 ----------------~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-Dg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                                      ......|+++|+++|+.+.++....   +   ...+.||| ||+.|+|..... ...+      
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~---~---~~~~~~sp~dg~~l~~~~~~~-~~~~------  214 (388)
T 3pe7_A          148 DWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ---W---LGHPIYRPYDDSTVAFCHEGP-HDLV------  214 (388)
T ss_dssp             GCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS---C---EEEEEEETTEEEEEEEEECSC-TTTS------
T ss_pred             ccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc---c---ccccEECCCCCCEEEEEEecC-CCCC------
Confidence                            1123679999999999888876532   1   34799999 999999765410 0111      


Q ss_pred             ccEEEEEEcCCCCcccCCCcccccCCCe-EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccccc
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLTRGRF-TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTS  408 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~  408 (790)
                      ..+||++++++++      .+.|+.+.. .....+.|||||+.|+|.+.........||++++++  ++.+.++..    
T Consensus       215 ~~~l~~~d~~~~~------~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~--g~~~~l~~~----  282 (388)
T 3pe7_A          215 DARMWLINEDGTN------MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET--LENRQLTSM----  282 (388)
T ss_dssp             SCSEEEEETTSCC------CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT--CCEEEEEEE----
T ss_pred             cceEEEEeCCCCc------eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCC--CceEEEEcC----
Confidence            3479999998887      778876542 222348899999999998876322224699999988  676666652    


Q ss_pred             CCCcc-c----EEEEEEecCCcEEEEEeec------CCCCeEEEEecCCCeEEEeccc
Q psy463          409 ANQKC-S----YSGATFSTNVSYYVLSCIG------PGIPEIMLFDKTGQRLLYWDTN  455 (790)
Q Consensus       409 ~~~~~-~----~~~~~~s~dg~~~~~~~~~------~~~~~i~~~~~~~~~~~~l~~~  455 (790)
                        ... .    .....|||||+++++....      .+...|+++++++++.+.++..
T Consensus       283 --~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~  338 (388)
T 3pe7_A          283 --PACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARH  338 (388)
T ss_dssp             --CCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEEC
T ss_pred             --CCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccc
Confidence              110 0    1113699999999887643      4477899999999887776543

>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}

Probab=99.80  E-value=2.1e-18  Score=174.38  Aligned_cols=249  Identities=12%  Similarity=0.064  Sum_probs=153.1

Q ss_pred             EEEEE-EcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          471 EYMSV-PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       471 ~~~~~-~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      +.+.+ ...||.++.+..+.+.+      ...|+||++||+++..   ..|.......++++.||.|+++|+||+|.+..
T Consensus        12 ~~~~~~~~~~g~~l~~~~~~~~~------~~~~~vv~~HG~~~~~---~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~   82 (270)
T 3llc_A           12 HAITVGQGSDARSIAALVRAPAQ------DERPTCIWLGGYRSDM---TGTKALEMDDLAASLGVGAIRFDYSGHGASGG   82 (270)
T ss_dssp             EEEEESSGGGCEEEEEEEECCSS------TTSCEEEEECCTTCCT---TSHHHHHHHHHHHHHTCEEEEECCTTSTTCCS
T ss_pred             ceEEEeeccCcceEEEEeccCCC------CCCCeEEEECCCcccc---ccchHHHHHHHHHhCCCcEEEeccccCCCCCC
Confidence            33444 45689999988776542      2358999999987762   23333334555655799999999999876543


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc---CCC--CceEEEEEeCCCCCccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL---DPS--NVFKCGISVAPVTDWIY  624 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~---~p~--~~~~~~v~~~~~~~~~~  624 (790)
                      ...        ...+.+..+.+..+++..   ...+++|+|||+||.+++.++.+   +|.  ..++++++.+|..++..
T Consensus        83 ~~~--------~~~~~~~~~d~~~~~~~l---~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~  151 (270)
T 3llc_A           83 AFR--------DGTISRWLEEALAVLDHF---KPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTS  151 (270)
T ss_dssp             CGG--------GCCHHHHHHHHHHHHHHH---CCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHH
T ss_pred             ccc--------cccHHHHHHHHHHHHHHh---ccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchh
Confidence            321        133455444444444422   25799999999999999999998   872  38999999999766432


Q ss_pred             ccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463          625 YDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTF  704 (790)
Q Consensus       625 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  704 (790)
                      ... + .   ...  ......+...            ......... ...+......+........              
T Consensus       152 ~~~-~-~---~~~--~~~~~~~~~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------  197 (270)
T 3llc_A          152 DLI-E-P---LLG--DRERAELAEN------------GYFEEVSEY-SPEPNIFTRALMEDGRANR--------------  197 (270)
T ss_dssp             HTT-G-G---GCC--HHHHHHHHHH------------SEEEECCTT-CSSCEEEEHHHHHHHHHTC--------------
T ss_pred             hhh-h-h---hhh--hhhhhhhhcc------------CcccChhhc-ccchhHHHHHHHhhhhhhh--------------
Confidence            100 0 0   000  0000000000            000000000 0001111111222221111              


Q ss_pred             CCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHH
Q psy463          705 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLE  782 (790)
Q Consensus       705 ~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~  782 (790)
                                 ....+.++ ++|+|+++|++|..+|.+.+..+.+.++.  .+++++++++++|.+..  ..+.+.+.+.
T Consensus       198 -----------~~~~~~~~-~~P~l~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~  263 (270)
T 3llc_A          198 -----------VMAGMIDT-GCPVHILQGMADPDVPYQHALKLVEHLPA--DDVVLTLVRDGDHRLSRPQDIDRMRNAIR  263 (270)
T ss_dssp             -----------CTTSCCCC-CSCEEEEEETTCSSSCHHHHHHHHHTSCS--SSEEEEEETTCCSSCCSHHHHHHHHHHHH
T ss_pred             -----------hhhhhhcC-CCCEEEEecCCCCCCCHHHHHHHHHhcCC--CCeeEEEeCCCcccccccccHHHHHHHHH
Confidence                       12456677 99999999999999999999999887765  24799999999997665  6778888899


Q ss_pred             HHHHH
Q psy463          783 RFLDS  787 (790)
Q Consensus       783 ~fl~~  787 (790)
                      +||++
T Consensus       264 ~fl~~  268 (270)
T 3llc_A          264 AMIEP  268 (270)
T ss_dssp             HHHC-
T ss_pred             HHhcC
Confidence            98865

>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0

Probab=99.80  E-value=7.8e-19  Score=178.98  Aligned_cols=242  Identities=16%  Similarity=0.214  Sum_probs=157.0

Q ss_pred             eEEEEEEc-CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          470 VEYMSVPI-QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       470 ~~~~~~~~-~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      .+.+++.+ .+|.++.+.++.|.++.  +.+++|+||++||+++..   ..|.. .....++++.|++|+++|.++.+..
T Consensus        15 ~~~~~~~s~~~g~~~~~~v~~P~~~~--~~~~~P~vv~lHG~~~~~---~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~   89 (280)
T 3ls2_A           15 HKQYTHSAVSTHCTMRFAVFLPPGAS--ESNKVPVLYWLSGLTCTD---ENFMQKAGAFKKAAELGIAIVAPDTSPRGDN   89 (280)
T ss_dssp             EEEEEEEETTTTEEEEEEEEECTTCB--TTBCEEEEEEECCTTCCS---HHHHHHSCCHHHHHHHTCEEEECCSSCCSTT
T ss_pred             EEEEEEechhcCCceEEEEEcCCCCC--CCCCcCEEEEeCCCCCCh---hhhhcchhHHHHHhhCCeEEEEeCCcccccc
Confidence            34455554 46889999999999876  578899999999988763   22321 1123455557999999997643321


Q ss_pred             -----------hhhhH-hhhhccC-CccchhH-HH-HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEE
Q psy463          548 -----------GNTLK-YAGYRRL-GTVEIYD-QI-NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKC  612 (790)
Q Consensus       548 -----------g~~~~-~~~~~~~-~~~~~~D-~~-~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~  612 (790)
                                 |..+. ......+ +.....+ +. +.+.++.+.++ + .++++|+||||||++|+.++.++|+ .|++
T Consensus        90 ~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~l~G~S~GG~~a~~~a~~~p~-~~~~  166 (280)
T 3ls2_A           90 VPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFP-V-TSTKAISGHSMGGHGALMIALKNPQ-DYVS  166 (280)
T ss_dssp             SCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSS-E-EEEEEEEEBTHHHHHHHHHHHHSTT-TCSC
T ss_pred             cccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCC-C-CCCeEEEEECHHHHHHHHHHHhCch-hheE
Confidence                       11100 0000000 0011122 21 33445555333 3 3799999999999999999999885 8999


Q ss_pred             EEEeCCCCCcccccc--cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcC
Q psy463          613 GISVAPVTDWIYYDT--IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD  690 (790)
Q Consensus       613 ~v~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~  690 (790)
                      +++.+|+.+......  .....+++.                                                      
T Consensus       167 ~~~~s~~~~~~~~~~~~~~~~~~~g~------------------------------------------------------  192 (280)
T 3ls2_A          167 ASAFSPIVNPINCPWGVKAFTGYLGA------------------------------------------------------  192 (280)
T ss_dssp             EEEESCCSCGGGSHHHHHHHHHHHCS------------------------------------------------------
T ss_pred             EEEecCccCcccCcchhhHHHhhcCc------------------------------------------------------
Confidence            999999876432100  000000000                                                      


Q ss_pred             cchhcccccCCCCcCCcchhhhhhhhhhhhhccC---CccEEEEecCCCcccchhh-hHHHHHHHHhcCCceEEEEcCCC
Q psy463          691 IMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIR---DKQYLLVHGTMDDNVHFQQ-SMMLAKSLQHADIMFQSQTYPDE  766 (790)
Q Consensus       691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~g~~~~~~~~p~~  766 (790)
                                      ....+...++...+++++   .+|+|++||+.|.+++.+. ++.++++|+++|+++++.++||+
T Consensus       193 ----------------~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~  256 (280)
T 3ls2_A          193 ----------------DKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGY  256 (280)
T ss_dssp             ----------------CGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTC
T ss_pred             ----------------hHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCCCceEEEeCCC
Confidence                            001112222334444441   4699999999999999855 89999999999999999999999


Q ss_pred             CCcCCCcchHHHHHHHHHHHHhhC
Q psy463          767 EHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       767 ~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      +|.+. .....+..+++|+.++|+
T Consensus       257 ~H~~~-~~~~~~~~~~~~~~~~l~  279 (280)
T 3ls2_A          257 DHSYF-FISSFIDQHLVFHHQYLS  279 (280)
T ss_dssp             CSSHH-HHHHHHHHHHHHHHHHHC
T ss_pred             CCchh-hHHHHHHHHHHHHHHHhc
Confidence            99876 355677888899998874

>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}

Probab=99.79  E-value=3.7e-19  Score=171.40  Aligned_cols=189  Identities=8%  Similarity=0.037  Sum_probs=127.0

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH-
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE-  576 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-  576 (790)
                      .+..++||++||.+++.   ..|. .+ ...++..|+.|++|+.+|.+.++..+.......  ...+++..+.++.+.+ 
T Consensus        19 ~~a~~~Vv~lHG~G~~~---~~~~-~l-~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~   91 (210)
T 4h0c_A           19 QRAKKAVVMLHGRGGTA---ADII-SL-QKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQN--QPALDSALALVGEVVAE   91 (210)
T ss_dssp             TTCSEEEEEECCTTCCH---HHHH-GG-GGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGG--TTHHHHHHHHHHHHHHH
T ss_pred             ccCCcEEEEEeCCCCCH---HHHH-HH-HHHhCCCCeEEEeecCCCCCccccccCCCcccc--hHHHHHHHHHHHHHHHH
Confidence            34568999999976542   2222 12 233445799999999887654333222111111  1123333333333322 


Q ss_pred             --hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccch
Q psy463          577 --NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK  654 (790)
Q Consensus       577 --~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  654 (790)
                        ..+ +|.+||+|+|+|+||.+++.++.++|. .++++++.++.....             .   ....          
T Consensus        92 ~~~~~-i~~~ri~l~G~S~Gg~~a~~~a~~~p~-~~~~vv~~sg~l~~~-------------~---~~~~----------  143 (210)
T 4h0c_A           92 IEAQG-IPAEQIYFAGFSQGACLTLEYTTRNAR-KYGGIIAFTGGLIGQ-------------E---LAIG----------  143 (210)
T ss_dssp             HHHTT-CCGGGEEEEEETHHHHHHHHHHHHTBS-CCSEEEEETCCCCSS-------------S---CCGG----------
T ss_pred             HHHhC-CChhhEEEEEcCCCcchHHHHHHhCcc-cCCEEEEecCCCCCh-------------h---hhhh----------
Confidence              143 889999999999999999999999985 889988887732110             0   0000          


Q ss_pred             hhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecC
Q psy463          655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGT  734 (790)
Q Consensus       655 ~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~  734 (790)
                                                                                     ......+++|+|++||+
T Consensus       144 ---------------------------------------------------------------~~~~~~~~~Pvl~~hG~  160 (210)
T 4h0c_A          144 ---------------------------------------------------------------NYKGDFKQTPVFISTGN  160 (210)
T ss_dssp             ---------------------------------------------------------------GCCBCCTTCEEEEEEEE
T ss_pred             ---------------------------------------------------------------hhhhhccCCceEEEecC
Confidence                                                                           00111126899999999


Q ss_pred             CCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHH
Q psy463          735 MDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDS  787 (790)
Q Consensus       735 ~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~  787 (790)
                      +|++||++.++++++.|+++|.++++++||+.+|.+.  . +-++.+.+||.|
T Consensus       161 ~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~--~-~el~~i~~wL~k  210 (210)
T 4h0c_A          161 PDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS--G-DEIQLVNNTILK  210 (210)
T ss_dssp             SCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC--H-HHHHHHHHTTTC
T ss_pred             CCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC--H-HHHHHHHHHHcC
Confidence            9999999999999999999999999999999999885  2 345778888753

>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A

Probab=99.79  E-value=3.4e-18  Score=177.72  Aligned_cols=235  Identities=13%  Similarity=0.009  Sum_probs=150.7

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|..+    +.|.+    .....|+||++|||+........|. .+...++.+.||.|+++|||+++.....        
T Consensus        66 ~g~~~----~~p~~----~~~~~~~vv~~HGgg~~~g~~~~~~-~~~~~la~~~g~~v~~~dyr~~~~~~~~--------  128 (322)
T 3k6k_A           66 GGVPC----IRQAT----DGAGAAHILYFHGGGYISGSPSTHL-VLTTQLAKQSSATLWSLDYRLAPENPFP--------  128 (322)
T ss_dssp             TTEEE----EEEEC----TTCCSCEEEEECCSTTTSCCHHHHH-HHHHHHHHHHTCEEEEECCCCTTTSCTT--------
T ss_pred             CCEeE----EecCC----CCCCCeEEEEEcCCcccCCChHHHH-HHHHHHHHhcCCEEEEeeCCCCCCCCCc--------
Confidence            67665    45654    2233455999999874322122222 2344555545999999999997754322        


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC---ceEEEEEeCCCCCcccccccchhhhcC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN---VFKCGISVAPVTDWIYYDTIYSERYMG  635 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~---~~~~~v~~~~~~~~~~~~~~~~~~~~g  635 (790)
                         ..++|+.++++|+.++  .+|.++|+|+|+|+||.+++.++.+.+..   .++++++.+|+.++......+..... 
T Consensus       129 ---~~~~d~~~a~~~l~~~--~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~-  202 (322)
T 3k6k_A          129 ---AAVDDCVAAYRALLKT--AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLAD-  202 (322)
T ss_dssp             ---HHHHHHHHHHHHHHHH--HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHTGG-
T ss_pred             ---hHHHHHHHHHHHHHHc--CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhccC-
Confidence               3478999999999984  37889999999999999999998876531   38899999998876432111100000 


Q ss_pred             CCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhh
Q psy463          636 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAA  715 (790)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  715 (790)
                                                        .+..........+...... ...      ...+          ..+
T Consensus       203 ----------------------------------~~~~~~~~~~~~~~~~~~~-~~~------~~~~----------~~s  231 (322)
T 3k6k_A          203 ----------------------------------RDFLAEPDTLGEMSELYVG-GED------RKNP----------LIS  231 (322)
T ss_dssp             ----------------------------------GCSSSCHHHHHHHHHHHHT-TSC------TTCT----------TTC
T ss_pred             ----------------------------------CCCcCCHHHHHHHHHHhcC-CCC------CCCC----------cCC
Confidence                                              0000111111111111110 000      0000          001


Q ss_pred             hhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cchHHHHHHHHHHHHhh
Q psy463          716 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       716 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~~~~~~i~~fl~~~l  789 (790)
                      ++...-.. .+|+||+||+.|..  ..++..+++.|+.+|+++++++||+++|.+..      ..+++++.+.+||+++|
T Consensus       232 p~~~~~~~-~pP~li~~G~~D~~--~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l  308 (322)
T 3k6k_A          232 PVYADLSG-LPEMLIHVGSEEAL--LSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARI  308 (322)
T ss_dssp             GGGSCCTT-CCCEEEEEESSCTT--HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTC
T ss_pred             cccccccC-CCcEEEEECCcCcc--HHHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHH
Confidence            11111112 47999999999987  46889999999999999999999999998864      35689999999999887


Q ss_pred             C
Q psy463          790 A  790 (790)
Q Consensus       790 ~  790 (790)
                      +
T Consensus       309 ~  309 (322)
T 3k6k_A          309 S  309 (322)
T ss_dssp             C
T ss_pred             h
Confidence            4

>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}

Probab=99.79  E-value=1.6e-18  Score=178.76  Aligned_cols=189  Identities=15%  Similarity=0.122  Sum_probs=147.1

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.. .+.++.|..     ..+.|+||++||+++..   ..|  ......++++||.|+.+|+||.+.+...        
T Consensus        80 ~g~~-~~~~~~p~~-----~~~~p~vv~~HG~~~~~---~~~--~~~~~~la~~G~~vv~~d~~g~g~s~~~--------  140 (306)
T 3vis_A           80 DGFG-GGTIYYPRE-----NNTYGAIAISPGYTGTQ---SSI--AWLGERIASHGFVVIAIDTNTTLDQPDS--------  140 (306)
T ss_dssp             SSSC-CEEEEEESS-----CSCEEEEEEECCTTCCH---HHH--HHHHHHHHTTTEEEEEECCSSTTCCHHH--------
T ss_pred             CCCc-ceEEEeeCC-----CCCCCEEEEeCCCcCCH---HHH--HHHHHHHHhCCCEEEEecCCCCCCCcch--------
Confidence            4443 356677764     33689999999987762   233  2334455568999999999997765432        


Q ss_pred             CCccchhHHHHHHHHHHHhC------CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhh
Q psy463          559 LGTVEIYDQINVTRYLQENL------PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSER  632 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~------~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~  632 (790)
                          ...|+.++++++.+ .      ..+|..+++|+|||+||.+++.++.++|.  ++++++.+|....          
T Consensus       141 ----~~~d~~~~~~~l~~-~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~--v~~~v~~~~~~~~----------  203 (306)
T 3vis_A          141 ----RARQLNAALDYMLT-DASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD--LKAAIPLTPWHLN----------  203 (306)
T ss_dssp             ----HHHHHHHHHHHHHH-TSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT--CSEEEEESCCCSC----------
T ss_pred             ----HHHHHHHHHHHHHh-hcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC--eeEEEEeccccCc----------
Confidence                24677888888887 4      45788899999999999999999998874  7888887774210          


Q ss_pred             hcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh
Q psy463          633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK  712 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  712 (790)
                                                                                                      
T Consensus       204 --------------------------------------------------------------------------------  203 (306)
T 3vis_A          204 --------------------------------------------------------------------------------  203 (306)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhhhhhhccCCccEEEEecCCCcccchh-hhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhhC
Q psy463          713 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       713 ~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l~  790 (790)
                           ..+.++ ++|+|+++|+.|..+|++ ++..+++.++..+ +++++++++++|.+.. ..+++.+.+.+||+++|+
T Consensus       204 -----~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~~l~  276 (306)
T 3vis_A          204 -----KSWRDI-TVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT-DKAYLELDGASHFAPNITNKTIGMYSVAWLKRFVD  276 (306)
T ss_dssp             -----CCCTTC-CSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHS
T ss_pred             -----cccccC-CCCEEEEecCCCcccCcchhHHHHHHHhccCC-CceEEEECCCCccchhhchhHHHHHHHHHHHHHcc
Confidence                 123345 899999999999999998 6999999998876 7899999999999887 788999999999998864

>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2

Probab=99.79  E-value=4.1e-18  Score=171.68  Aligned_cols=216  Identities=13%  Similarity=0.066  Sum_probs=145.8

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +...+...++..+.+.++.|.+      ++.|+||++||+++.......|. .+. ..++++||.|+++|+||++.....
T Consensus        39 ~~~~i~~~~~~~~~~~~~~p~~------~~~p~vv~~HGgg~~~~~~~~~~-~~~-~~l~~~G~~v~~~d~~~~~~~~~~  110 (262)
T 2pbl_A           39 ARLNLSYGEGDRHKFDLFLPEG------TPVGLFVFVHGGYWMAFDKSSWS-HLA-VGALSKGWAVAMPSYELCPEVRIS  110 (262)
T ss_dssp             EEEEEESSSSTTCEEEEECCSS------SCSEEEEEECCSTTTSCCGGGCG-GGG-HHHHHTTEEEEEECCCCTTTSCHH
T ss_pred             CccccccCCCCCceEEEEccCC------CCCCEEEEEcCcccccCChHHHH-HHH-HHHHhCCCEEEEeCCCCCCCCChH
Confidence            4455665667777778888863      45799999999753211123333 233 344458999999999997653322


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC-----CCceEEEEEeCCCCCcccc
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP-----SNVFKCGISVAPVTDWIYY  625 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-----~~~~~~~v~~~~~~~~~~~  625 (790)
                                 ..++|+.++++++..+.+    .+++|+||||||.+++.++.++.     ...++++++.+|+.++...
T Consensus       111 -----------~~~~d~~~~~~~l~~~~~----~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~  175 (262)
T 2pbl_A          111 -----------EITQQISQAVTAAAKEID----GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPL  175 (262)
T ss_dssp             -----------HHHHHHHHHHHHHHHHSC----SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGG
T ss_pred             -----------HHHHHHHHHHHHHHHhcc----CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHH
Confidence                       347888899999987433    79999999999999999998762     3489999999998764321


Q ss_pred             cccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463          626 DTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE  705 (790)
Q Consensus       626 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  705 (790)
                      ...+....+...                                                                    
T Consensus       176 ~~~~~~~~~~~~--------------------------------------------------------------------  187 (262)
T 2pbl_A          176 LRTSMNEKFKMD--------------------------------------------------------------------  187 (262)
T ss_dssp             GGSTTHHHHCCC--------------------------------------------------------------------
T ss_pred             HhhhhhhhhCCC--------------------------------------------------------------------
Confidence            100000000000                                                                    


Q ss_pred             CcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHH
Q psy463          706 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERF  784 (790)
Q Consensus       706 ~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~f  784 (790)
                        ...+...++...+.++ ++|+|++||++|..++++++..+++.++     ++++++|+++|.... ........+.++
T Consensus       188 --~~~~~~~~~~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~~~~~~~~~~~~l~~~  259 (262)
T 2pbl_A          188 --ADAAIAESPVEMQNRY-DAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHHFNVIEPLADPESDLVAV  259 (262)
T ss_dssp             --HHHHHHTCGGGCCCCC-SCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCTTTTTGGGGCTTCHHHHH
T ss_pred             --HHHHHhcCcccccCCC-CCCEEEEEeCCCCcccHHHHHHHHHHhC-----CeEEEeCCCCcchHHhhcCCCCcHHHHH
Confidence              0000111122345567 8999999999999999999999999987     589999999998876 444444455554


Q ss_pred             H
Q psy463          785 L  785 (790)
Q Consensus       785 l  785 (790)
                      +
T Consensus       260 l  260 (262)
T 2pbl_A          260 I  260 (262)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2

Probab=99.79  E-value=1.9e-18  Score=182.56  Aligned_cols=262  Identities=14%  Similarity=0.086  Sum_probs=160.4

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccc--ccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE--RFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~--~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      .+.+.+...+|..+.+.+|.|.+    ..+++|+||++||++.......  .|. .+...++ +.||.|+.+|+||++++
T Consensus        82 ~~~~~~~~~~g~~l~~~v~~p~~----~~~~~p~vv~iHGgg~~~g~~~~~~~~-~~~~~la-~~g~~vv~~d~r~~gg~  155 (361)
T 1jkm_A           82 TSTETILGVDGNEITLHVFRPAG----VEGVLPGLVYTHGGGMTILTTDNRVHR-RWCTDLA-AAGSVVVMVDFRNAWTA  155 (361)
T ss_dssp             EEEEEEECTTSCEEEEEEEEETT----CCSCEEEEEEECCSTTTSSCSSSHHHH-HHHHHHH-HTTCEEEEEECCCSEET
T ss_pred             eeeeeeecCCCCeEEEEEEeCCC----CCCCCeEEEEEcCCccccCCCcccchh-HHHHHHH-hCCCEEEEEecCCCCCC
Confidence            34566777788899999999975    2337899999999874322122  221 2233444 48999999999998643


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc-----CCCCceEEEEEeCCCCCc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL-----DPSNVFKCGISVAPVTDW  622 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~-----~p~~~~~~~v~~~~~~~~  622 (790)
                      ...       ......+.|+.++++|+.++......++|+|+|||+||.+++.++..     +|. .++++|+.+|+.+.
T Consensus       156 ~~~-------~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~-~i~~~il~~~~~~~  227 (361)
T 1jkm_A          156 EGH-------HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLD-AIDGVYASIPYISG  227 (361)
T ss_dssp             TEE-------CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGG-GCSEEEEESCCCCC
T ss_pred             CCC-------CCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCc-CcceEEEECCcccc
Confidence            211       11224578999999999873211122399999999999999999887     553 79999999998765


Q ss_pred             ccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          623 IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       623 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                      ........... ..       ..+..        . .           ...........+..........      ...+
T Consensus       228 ~~~~~~~~~~~-~~-------~~~~~--------~-~-----------~~~~~~~~~~~~~~~~~~~~~~------~~~~  273 (361)
T 1jkm_A          228 GYAWDHERRLT-EL-------PSLVE--------N-D-----------GYFIENGGMALLVRAYDPTGEH------AEDP  273 (361)
T ss_dssp             CTTSCHHHHHH-HC-------THHHH--------T-T-----------TSSSCHHHHHHHHHHHSSSSTT------TTCT
T ss_pred             ccccccccccc-cC-------cchhh--------c-c-----------CcccCHHHHHHHHHHhCCCCCC------CCCc
Confidence            21000000000 00       00000        0 0           0000011111111111100000      0000


Q ss_pred             CcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCC-C------cc-
Q psy463          703 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLI-G------VR-  774 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~-~------~~-  774 (790)
                      .. .     ........+.++ . |+||+||++|..++  ++..+++.|++++.+++++++|+++|.+. .      .. 
T Consensus       274 ~~-~-----p~~~~~~~l~~l-~-P~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~  343 (361)
T 1jkm_A          274 IA-W-----PYFASEDELRGL-P-PFVVAVNELDPLRD--EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAAL  343 (361)
T ss_dssp             TT-C-----GGGCCHHHHTTC-C-CEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHH
T ss_pred             cc-C-----ccccChhhHcCC-C-ceEEEEcCcCcchh--hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHH
Confidence            00 0     000011345667 4 99999999999988  88899999999999999999999999887 2      33 


Q ss_pred             hHHHHHHHHHHHHhh
Q psy463          775 PHFYHTLERFLDSCF  789 (790)
Q Consensus       775 ~~~~~~i~~fl~~~l  789 (790)
                      .++.+.+.+||+++.
T Consensus       344 ~~~~~~i~~fl~~~~  358 (361)
T 1jkm_A          344 ESTVRDVAGFAADRA  358 (361)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhh
Confidence            778899999998763

>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16

Probab=99.79  E-value=4.2e-18  Score=171.66  Aligned_cols=201  Identities=15%  Similarity=0.108  Sum_probs=149.0

Q ss_pred             eEEEEEEcC--CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          470 VEYMSVPIQ--PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       470 ~~~~~~~~~--dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      .+.+.+...  ++.. .+.++.|...   +.++.|+||++||.++..   ..|.  .....++++||.|+++|++|.+.+
T Consensus        25 ~~~~~~~~~~~~~~~-~~~l~~p~~~---~~~~~p~vv~~HG~~~~~---~~~~--~~~~~l~~~G~~v~~~d~~g~g~~   95 (262)
T 1jfr_A           25 TSQTSVSSLVASGFG-GGTIYYPTST---ADGTFGAVVISPGFTAYQ---SSIA--WLGPRLASQGFVVFTIDTNTTLDQ   95 (262)
T ss_dssp             EEEEEECTTTCSSSC-CEEEEEESCC---TTCCEEEEEEECCTTCCG---GGTT--THHHHHHTTTCEEEEECCSSTTCC
T ss_pred             ccceEecceeccCCC-ceeEEecCCC---CCCCCCEEEEeCCcCCCc---hhHH--HHHHHHHhCCCEEEEeCCCCCCCC
Confidence            444555543  2332 4566777642   245679999999988763   2332  233445568999999999997754


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY  624 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~  624 (790)
                      ...            ...|+.++++++.+.   ...++..+++|+||||||.+++.++.++|.  ++++++.+|....  
T Consensus        96 ~~~------------~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~p~~~~--  159 (262)
T 1jfr_A           96 PDS------------RGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS--LKAAIPLTGWNTD--  159 (262)
T ss_dssp             HHH------------HHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT--CSEEEEESCCCSC--
T ss_pred             Cch------------hHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc--ceEEEeecccCcc--
Confidence            322            245677788888761   223567899999999999999999998874  7888887764210  


Q ss_pred             ccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463          625 YDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTF  704 (790)
Q Consensus       625 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  704 (790)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (262)
T 1jfr_A          160 --------------------------------------------------------------------------------  159 (262)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhh-hHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHH
Q psy463          705 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQ-SMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLE  782 (790)
Q Consensus       705 ~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~  782 (790)
                                   ..+.++ ++|+|+++|++|..++.+. ++.+++.+.. +.+++++++++++|.+.. ..+++.+.+.
T Consensus       160 -------------~~~~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~H~~~~~~~~~~~~~i~  224 (262)
T 1jfr_A          160 -------------KTWPEL-RTPTLVVGADGDTVAPVATHSKPFYESLPG-SLDKAYLELRGASHFTPNTSDTTIAKYSI  224 (262)
T ss_dssp             -------------CCCTTC-CSCEEEEEETTCSSSCTTTTHHHHHHHSCT-TSCEEEEEETTCCTTGGGSCCHHHHHHHH
T ss_pred             -------------cccccc-CCCEEEEecCccccCCchhhHHHHHHHhhc-CCCceEEEeCCCCcCCcccchHHHHHHHH
Confidence                         223455 8999999999999999998 9999999854 567899999999999887 6789999999


Q ss_pred             HHHHHhhC
Q psy463          783 RFLDSCFA  790 (790)
Q Consensus       783 ~fl~~~l~  790 (790)
                      +||+++|+
T Consensus       225 ~fl~~~l~  232 (262)
T 1jfr_A          225 SWLKRFID  232 (262)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHhc
Confidence            99998864

>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*

Probab=99.78  E-value=1.7e-17  Score=167.70  Aligned_cols=218  Identities=17%  Similarity=0.142  Sum_probs=148.7

Q ss_pred             CCceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc------hHHHHHhc---CCeEE
Q psy463          467 LPSVEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD------WNLYLADN---KDIVV  536 (790)
Q Consensus       467 ~~~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~------~~~~~~~~---~G~~v  536 (790)
                      ..+.+.+++.+. +|..+.+.+|.|.++.  ..+++|+||++||+++..   ..|...      +...+.+.   .||.|
T Consensus        29 ~g~~~~~~~~s~~~~~~~~~~v~~P~~~~--~~~~~P~vv~lHG~g~~~---~~~~~~~~~~~~~~~~l~~~g~~~~~~v  103 (268)
T 1jjf_A           29 RGQVVNISYFSTATNSTRPARVYLPPGYS--KDKKYSVLYLLHGIGGSE---NDWFEGGGRANVIADNLIAEGKIKPLII  103 (268)
T ss_dssp             CCEEEEEEEEETTTTEEEEEEEEECTTCC--TTSCBCEEEEECCTTCCT---TTTTTTTTCHHHHHHHHHHTTSSCCCEE
T ss_pred             CceEEEEEEeccccCCceEEEEEeCCCCC--CCCCccEEEEECCCCCCc---chhhhccccHHHHHHHHHHcCCCCCEEE
Confidence            345666777654 5789999999999876  567899999999988652   223221      12333332   36999


Q ss_pred             EEEcCCCCCCC-hhhhHhhhhccCCccchhH-HHHHHHHHHHhCCC-cCCCceEEEEechHHHHHHHHHhcCCCCceEEE
Q psy463          537 AYIDGRNSALK-GNTLKYAGYRRLGTVEIYD-QINVTRYLQENLPY-IDKTRTAIWGWSYGGYATGLALALDPSNVFKCG  613 (790)
Q Consensus       537 ~~~d~rG~~~~-g~~~~~~~~~~~~~~~~~D-~~~~~~~l~~~~~~-~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~  613 (790)
                      +.+|+++.+.. ...+.         ....+ +.++++++.++++. +|.++++|+|||+||++++.++.++|+ .++++
T Consensus       104 v~~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~  173 (268)
T 1jjf_A          104 VTPNTNAAGPGIADGYE---------NFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLD-KFAYI  173 (268)
T ss_dssp             EEECCCCCCTTCSCHHH---------HHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTT-TCSEE
T ss_pred             EEeCCCCCCccccccHH---------HHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCch-hhhhe
Confidence            99999986431 11110         11222 33456666654442 378899999999999999999998885 89999


Q ss_pred             EEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcch
Q psy463          614 ISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF  693 (790)
Q Consensus       614 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~  693 (790)
                      ++.+|..++...     ...            +            .                              ..  
T Consensus       174 v~~s~~~~~~~~-----~~~------------~------------~------------------------------~~--  192 (268)
T 1jjf_A          174 GPISAAPNTYPN-----ERL------------F------------P------------------------------DG--  192 (268)
T ss_dssp             EEESCCTTSCCH-----HHH------------C------------T------------------------------TT--
T ss_pred             EEeCCCCCCCch-----hhh------------c------------C------------------------------cc--
Confidence            999986543210     000            0            0                              00  


Q ss_pred             hcccccCCCCcCCcchhhhhhhhhhhhhccCCc-cEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          694 QSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDK-QYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                                              ...... .. |+|++||++|..+|.  ++.+++.|+++|+++++.++|+++|.+..
T Consensus       193 ------------------------~~~~~~-~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~~~g~~H~~~~  245 (268)
T 1jjf_A          193 ------------------------GKAARE-KLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVYWLIQGGGHDFNV  245 (268)
T ss_dssp             ------------------------THHHHH-HCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSSHHH
T ss_pred             ------------------------hhhhhh-cCceEEEEecCCCCCccH--HHHHHHHHHHCCCceEEEEcCCCCcCHhH
Confidence                                    000111 33 599999999999884  77899999999999999999999998752


Q ss_pred             cchHHHHHHHHHHHHh
Q psy463          773 VRPHFYHTLERFLDSC  788 (790)
Q Consensus       773 ~~~~~~~~i~~fl~~~  788 (790)
                       ....+..+++||.++
T Consensus       246 -~~~~~~~~~~~l~~~  260 (268)
T 1jjf_A          246 -WKPGLWNFLQMADEA  260 (268)
T ss_dssp             -HHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHhc
Confidence             445567788888764

>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}

Probab=99.77  E-value=1.2e-17  Score=175.57  Aligned_cols=269  Identities=12%  Similarity=0.104  Sum_probs=160.4

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      .+...||.++.+.++.|.+      .+.|+||++||+++..   ..|.  .....++++||.|+++|+||.|.+..... 
T Consensus        39 ~~~~~dg~~l~~~~~~p~~------~~~p~vv~~HG~~~~~---~~~~--~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-  106 (342)
T 3hju_A           39 HLVNADGQYLFCRYWKPTG------TPKALIFVSHGAGEHS---GRYE--ELARMLMGLDLLVFAHDHVGHGQSEGERM-  106 (342)
T ss_dssp             EEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG---GGGH--HHHHHHHTTTEEEEEECCTTSTTSCSSTT-
T ss_pred             eEEccCCeEEEEEEeCCCC------CCCcEEEEECCCCccc---chHH--HHHHHHHhCCCeEEEEcCCCCcCCCCcCC-
Confidence            5667799999999998853      4468999999998763   2332  23344555799999999999876543210 


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhh
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERY  633 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~  633 (790)
                        ........++|+.++++++..+   .+..+++|+|||+||.+++.++.++|+ +++++++.+|...............
T Consensus       107 --~~~~~~~~~~d~~~~l~~l~~~---~~~~~v~l~G~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~  180 (342)
T 3hju_A          107 --VVSDFHVFVRDVLQHVDSMQKD---YPGLPVFLLGHSMGGAIAILTAAERPG-HFAGMVLISPLVLANPESATTFKVL  180 (342)
T ss_dssp             --CCSCTHHHHHHHHHHHHHHHHH---STTCCEEEEEETHHHHHHHHHHHHSTT-TCSEEEEESCCCSCCTTTTSHHHHH
T ss_pred             --CcCcHHHHHHHHHHHHHHHHHh---CCCCcEEEEEeChHHHHHHHHHHhCcc-ccceEEEECcccccchhhhhHHHHH
Confidence              0011112378888899998874   345799999999999999999999885 8999999998765432110000000


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh-h
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY-K  712 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~  712 (790)
                      +         ..+        ...+...  +.. ...+.... .........+......     +............. .
T Consensus       181 ~---------~~~--------~~~~~~~--~~~-~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  234 (342)
T 3hju_A          181 A---------AKV--------LNLVLPN--LSL-GPIDSSVL-SRNKTEVDIYNSDPLI-----CRAGLKVCFGIQLLNA  234 (342)
T ss_dssp             H---------HHH--------HHHHCTT--CBC-CCCCGGGS-CSCHHHHHHHHTCTTC-----CCSCCBHHHHHHHHHH
T ss_pred             H---------HHH--------HHHhccc--ccc-Cccccccc-ccchHHHHHHhcCccc-----ccccccHHHHHHHHHH
Confidence            0         000        0000000  000 00000000 0000111111110000     00000000000000 0


Q ss_pred             hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cc---hHHHHHHHHHHHHh
Q psy463          713 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VR---PHFYHTLERFLDSC  788 (790)
Q Consensus       713 ~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~---~~~~~~i~~fl~~~  788 (790)
                      .......+.++ ++|+|+++|++|..++++.+..+++.+...  .++++++++++|.+.. .+   .++...+.+||+++
T Consensus       235 ~~~~~~~~~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~  311 (342)
T 3hju_A          235 VSRVERALPKL-TVPFLLLQGSADRLCDSKGAYLLMELAKSQ--DKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR  311 (342)
T ss_dssp             HHHHHHHGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHCCCS--SEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhC-CcCEEEEEeCCCcccChHHHHHHHHHcCCC--CceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcc
Confidence            11223557788 999999999999999999999999887642  4689999999999886 33   36777789999876


Q ss_pred             h
Q psy463          789 F  789 (790)
Q Consensus       789 l  789 (790)
                      +
T Consensus       312 ~  312 (342)
T 3hju_A          312 T  312 (342)
T ss_dssp             H
T ss_pred             c
Confidence            5

>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}

Probab=99.77  E-value=2.7e-18  Score=175.21  Aligned_cols=240  Identities=12%  Similarity=0.157  Sum_probs=153.2

Q ss_pred             EEEEEEc-CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcCC--CCCC
Q psy463          471 EYMSVPI-QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDGR--NSAL  546 (790)
Q Consensus       471 ~~~~~~~-~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~r--G~~~  546 (790)
                      +.+++.+ ..|..+.+.++.|.++.   .+++|+||++||+++..   ..|.. .....++++.|+.|+++|.+  |.+.
T Consensus        23 ~~~~~~s~~~~~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~---~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~   96 (283)
T 4b6g_A           23 QVWAHHAQTLQCEMKFAVYLPNNPE---NRPLGVIYWLSGLTCTE---QNFITKSGFQRYAAEHQVIVVAPDTSPRGEQV   96 (283)
T ss_dssp             EEEEEEETTTTEEEEEEEEECCCTT---CCCEEEEEEECCTTCCS---HHHHHHSCTHHHHHHHTCEEEEECSSCCSTTS
T ss_pred             EEEEEechhhCCceEEEEEeCCCCC---CCCCCEEEEEcCCCCCc---cchhhcccHHHHHhhCCeEEEEeccccccccc
Confidence            3344443 36889999999998753   56799999999998763   23321 12335555679999999964  4321


Q ss_pred             Ch---------hhh-HhhhhccC-CccchhHH-H-HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEE
Q psy463          547 KG---------NTL-KYAGYRRL-GTVEIYDQ-I-NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCG  613 (790)
Q Consensus       547 ~g---------~~~-~~~~~~~~-~~~~~~D~-~-~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~  613 (790)
                      .+         ..+ .......+ +.....+. . +.+.++.+.++  +.+|++|+||||||++|+.++.++|+ .++++
T Consensus        97 ~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~G~S~GG~~a~~~a~~~p~-~~~~~  173 (283)
T 4b6g_A           97 PNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFP--TNGKRSIMGHSMGGHGALVLALRNQE-RYQSV  173 (283)
T ss_dssp             CCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSC--EEEEEEEEEETHHHHHHHHHHHHHGG-GCSCE
T ss_pred             cccccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCC--CCCCeEEEEEChhHHHHHHHHHhCCc-cceeE
Confidence            11         110 00000000 00111222 2 34445554333  35799999999999999999998885 89999


Q ss_pred             EEeCCCCCccccc--ccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCc
Q psy463          614 ISVAPVTDWIYYD--TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI  691 (790)
Q Consensus       614 v~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~  691 (790)
                      ++.+|+.+.....  ......+++.                                                       
T Consensus       174 ~~~s~~~~~~~~~~~~~~~~~~~g~-------------------------------------------------------  198 (283)
T 4b6g_A          174 SAFSPILSPSLVPWGEKAFTAYLGK-------------------------------------------------------  198 (283)
T ss_dssp             EEESCCCCGGGSHHHHHHHHHHHCS-------------------------------------------------------
T ss_pred             EEECCccccccCcchhhhHHhhcCC-------------------------------------------------------
Confidence            9999976643210  0000000000                                                       


Q ss_pred             chhcccccCCCCcCCcchhhhhhhhhhhhhccC-CccEEEEecCCCcccch-hhhHHHHHHHHhcCCceEEEEcCCCCCc
Q psy463          692 MFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIR-DKQYLLVHGTMDDNVHF-QQSMMLAKSLQHADIMFQSQTYPDEEHG  769 (790)
Q Consensus       692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~P~Lii~G~~D~~v~~-~~~~~l~~~l~~~g~~~~~~~~p~~~H~  769 (790)
                                     ....+...++...+++++ .+|+|++||+.|..++. .++..++++|+++|+++++.++||++|.
T Consensus       199 ---------------~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~  263 (283)
T 4b6g_A          199 ---------------DREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHS  263 (283)
T ss_dssp             ---------------CGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSS
T ss_pred             ---------------chHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcC
Confidence                           001122223334444442 46999999999999987 3389999999999999999999999998


Q ss_pred             CCCcchHHHHHHHHHHHHhhC
Q psy463          770 LIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       770 ~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      +. .....+..+++|+.++|+
T Consensus       264 ~~-~~~~~l~~~l~~~~~~l~  283 (283)
T 4b6g_A          264 YY-FIASFIGEHIAYHAAFLK  283 (283)
T ss_dssp             HH-HHHHHHHHHHHHHHTTCC
T ss_pred             Hh-HHHHHHHHHHHHHHHhcC
Confidence            75 355677888999998875

>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21

Probab=99.77  E-value=1.2e-17  Score=191.32  Aligned_cols=267  Identities=16%  Similarity=0.185  Sum_probs=167.9

Q ss_pred             cCCCcE--EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccc----------c----------------------------
Q psy463          477 IQPNME--AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQ----------V----------------------------  516 (790)
Q Consensus       477 ~~dg~~--i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~----------~----------------------------  516 (790)
                      ..||.+  |.+.+++|.+     .+++|+||..|+......          +                            
T Consensus       180 ~~DG~~d~L~a~l~~P~~-----~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~  254 (763)
T 1lns_A          180 EQRGENDLIKIQIIRPKS-----TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKE  254 (763)
T ss_dssp             TCSSSCCEEEEEEEECCC-----SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCC
T ss_pred             CCCCCeeeEEEEEEecCC-----CCcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccc
Confidence            468998  9999999984     468999998876543210          0                            


Q ss_pred             -------ccccc----cchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHh--------
Q psy463          517 -------TERFS----VDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN--------  577 (790)
Q Consensus       517 -------~~~~~----~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--------  577 (790)
                             ...|.    ..+. ..++++||+|+.+|+||+|.++..+     ..++..+++|+.++++|+..+        
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~-~~la~~GYaVv~~D~RG~G~S~G~~-----~~~~~~e~~D~~a~IdwL~~~~~~~~d~~  328 (763)
T 1lns_A          255 LPIVDKAPYRFTHGWTYSLN-DYFLTRGFASIYVAGVGTRSSDGFQ-----TSGDYQQIYSMTAVIDWLNGRARAYTSRK  328 (763)
T ss_dssp             CCEESSCSCBCCCCCCCHHH-HHHHTTTCEEEEECCTTSTTSCSCC-----CTTSHHHHHHHHHHHHHHTTSSCEESSTT
T ss_pred             ccccccchhccccccccchH-HHHHHCCCEEEEECCCcCCCCCCcC-----CCCCHHHHHHHHHHHHHHhhccccccccc
Confidence                   00111    0122 4455689999999999988765432     122335689999999999741        


Q ss_pred             ------CCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhh----hc-CCCCccCchhhh
Q psy463          578 ------LPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSER----YM-GLPTFEDNLEGY  646 (790)
Q Consensus       578 ------~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~----~~-g~~~~~~~~~~~  646 (790)
                            .+ .+..||+|+|+||||++++.+|.++|+ .++++|+.+|+.++..+   +.+.    .. +.+  .......
T Consensus       329 ~~~~v~q~-~~~grVgl~G~SyGG~ial~~Aa~~p~-~lkaiV~~~~~~d~~~~---~~~~g~~~~~~g~~--~~~~~~l  401 (763)
T 1lns_A          329 KTHEIKAS-WANGKVAMTGKSYLGTMAYGAATTGVE-GLELILAEAGISSWYNY---YRENGLVRSPGGFP--GEDLDVL  401 (763)
T ss_dssp             CCCEECCT-TEEEEEEEEEETHHHHHHHHHHTTTCT-TEEEEEEESCCSBHHHH---HBSSSSBCCCTTCT--TCCHHHH
T ss_pred             cccccccc-CCCCcEEEEEECHHHHHHHHHHHhCCc-ccEEEEEecccccHHHH---hhhcchhhhcccCC--chhhhHH
Confidence                  23 234699999999999999999998875 89999999998875421   1010    00 111  0000000


Q ss_pred             hhccccchhhhccCCcEEEEeecCCCccChhhHH----HHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhc
Q psy463          647 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSM----MLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDR  722 (790)
Q Consensus       647 ~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~----~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (790)
                      .....   ...+.            . -+.....    .....+...       .....+   .....|+..++...+++
T Consensus       402 ~~~~~---~~~~~------------~-g~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~w~~~s~~~~l~~  455 (763)
T 1lns_A          402 AALTY---SRNLD------------G-ADFLKGNAEYEKRLAEMTAA-------LDRKSG---DYNQFWHDRNYLINTDK  455 (763)
T ss_dssp             HHHHC---GGGGS------------H-HHHHHHHHHHHHHHHHHHHH-------HCTTTC---CCCHHHHTTBGGGGGGG
T ss_pred             hHHHH---hhhcC------------c-chhhhHHHHHHHHHHHHHhh-------hhhccC---chhHHhhccChhhHhhc
Confidence            00000   00000            0 0000000    001111100       000111   12345566677788999


Q ss_pred             cCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          723 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       723 i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      | ++|+|++||.+|.+||+.++.+++++++. +.+.++++ ++++|....  ....+.+.+.+||+++|+
T Consensus       456 I-~~PvLii~G~~D~~vp~~~a~~l~~al~~-~~~~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lk  522 (763)
T 1lns_A          456 V-KADVLIVHGLQDWNVTPEQAYNFWKALPE-GHAKHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKLL  522 (763)
T ss_dssp             C-CSEEEEEEETTCCSSCTHHHHHHHHHSCT-TCCEEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHHT
T ss_pred             C-CCCEEEEEECCCCCCChHHHHHHHHhhcc-CCCeEEEE-eCCcccCccccchHHHHHHHHHHHHHHhc
Confidence            9 99999999999999999999999999987 66666655 567998754  456789999999999985

>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32

Probab=99.76  E-value=1.1e-17  Score=169.82  Aligned_cols=211  Identities=16%  Similarity=0.103  Sum_probs=139.7

Q ss_pred             CCCccEEEEEcCCCCccc--cccccccchHHHH---HhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHH
Q psy463          498 HKKYPLLIHVYGGPSSFQ--VTERFSVDWNLYL---ADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTR  572 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~~---~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~  572 (790)
                      .++.|+||++||+++...  ....|. .+...+   +++.||.|+++|+|+++.....           ..++|+.++++
T Consensus        38 ~~~~p~vv~lHGgg~~~g~~~~~~~~-~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~-----------~~~~d~~~~~~  105 (273)
T 1vkh_A           38 QNTREAVIYIHGGAWNDPENTPNDFN-QLANTIKSMDTESTVCQYSIEYRLSPEITNP-----------RNLYDAVSNIT  105 (273)
T ss_dssp             TTCCEEEEEECCSTTTCTTCCGGGGH-HHHHHHHHHCTTCCEEEEEECCCCTTTSCTT-----------HHHHHHHHHHH
T ss_pred             CCCCeEEEEECCCcccCCcCChHHHH-HHHHHHhhhhccCCcEEEEeecccCCCCCCC-----------cHHHHHHHHHH
Confidence            456799999999875421  012222 223333   1468999999999986543211           34789999999


Q ss_pred             HHHHhCCCcCCCceEEEEechHHHHHHHHHhcC-----------------CCCceEEEEEeCCCCCcccccccchhhhcC
Q psy463          573 YLQENLPYIDKTRTAIWGWSYGGYATGLALALD-----------------PSNVFKCGISVAPVTDWIYYDTIYSERYMG  635 (790)
Q Consensus       573 ~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~-----------------p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g  635 (790)
                      ++.++   ++..+++|+||||||.+++.++.++                 + ..++++++.+|+.+........      
T Consensus       106 ~l~~~---~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~-~~v~~~v~~~~~~~~~~~~~~~------  175 (273)
T 1vkh_A          106 RLVKE---KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLL-QIVKRVFLLDGIYSLKELLIEY------  175 (273)
T ss_dssp             HHHHH---HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHH-TTEEEEEEESCCCCHHHHHHHC------
T ss_pred             HHHHh---CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCC-cccceeeeecccccHHHhhhhc------
Confidence            99884   5678999999999999999999875                 3 4789999998876543210000      


Q ss_pred             CCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhh
Q psy463          636 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAA  715 (790)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  715 (790)
                              ..+..     .....                           + .....          .+...   ....+
T Consensus       176 --------~~~~~-----~~~~~---------------------------~-~~~~~----------~~~~~---~~~~~  201 (273)
T 1vkh_A          176 --------PEYDC-----FTRLA---------------------------F-PDGIQ----------MYEEE---PSRVM  201 (273)
T ss_dssp             --------GGGHH-----HHHHH---------------------------C-TTCGG----------GCCCC---HHHHH
T ss_pred             --------ccHHH-----HHHHH---------------------------h-ccccc----------chhhc---ccccC
Confidence                    00000     00000                           0 00000          00000   00000


Q ss_pred             h--hhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHH
Q psy463          716 L--NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFL  785 (790)
Q Consensus       716 ~--~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl  785 (790)
                      +  ......+ .+|+|++||++|..+|+++++.+++.++..+.+++++++|+++|.+....+++.+.+.+||
T Consensus       202 ~~~~~~~~~~-~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl  272 (273)
T 1vkh_A          202 PYVKKALSRF-SIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNGKVAKYIFDNI  272 (273)
T ss_dssp             HHHHHHHHHH-TCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGCHHHHHHHHHTC
T ss_pred             hhhhhccccc-CCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccChHHHHHHHHHc
Confidence            0  0123346 8999999999999999999999999999999999999999999998763388888888886

>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*

Probab=99.76  E-value=4.4e-17  Score=167.61  Aligned_cols=269  Identities=12%  Similarity=0.102  Sum_probs=158.8

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      .+...+|.++++.++.|.+      .+.|+||++||.++..   ..|.  .....++++||.|+++|+||+|.+..... 
T Consensus        21 ~~~~~~g~~l~~~~~~~~~------~~~~~vv~~hG~~~~~---~~~~--~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-   88 (303)
T 3pe6_A           21 HLVNADGQYLFCRYWAPTG------TPKALIFVSHGAGEHS---GRYE--ELARMLMGLDLLVFAHDHVGHGQSEGERM-   88 (303)
T ss_dssp             EEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG---GGGH--HHHHHHHHTTEEEEEECCTTSTTSCSSTT-
T ss_pred             eEecCCCeEEEEEEeccCC------CCCeEEEEECCCCchh---hHHH--HHHHHHHhCCCcEEEeCCCCCCCCCCCCC-
Confidence            5667799999999998853      4468999999988763   2333  22334445799999999999876543210 


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhh
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERY  633 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~  633 (790)
                        ....-...++|+.+.++++..+   .+..+++++|||+||.+++.++.++|. .++++++.+|...............
T Consensus        89 --~~~~~~~~~~d~~~~l~~l~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~  162 (303)
T 3pe6_A           89 --VVSDFHVFVRDVLQHVDSMQKD---YPGLPVFLLGHSMGGAIAILTAAERPG-HFAGMVLISPLVLANPESATTFKVL  162 (303)
T ss_dssp             --CCSSTHHHHHHHHHHHHHHHHH---STTCCEEEEEETHHHHHHHHHHHHSTT-TCSEEEEESCSSSBCHHHHHHHHHH
T ss_pred             --CCCCHHHHHHHHHHHHHHHhhc---cCCceEEEEEeCHHHHHHHHHHHhCcc-cccEEEEECccccCchhccHHHHHH
Confidence              0001112367888888888764   235699999999999999999999885 8999999998765432100000000


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh-h
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY-K  712 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~  712 (790)
                      .         ...        ...+.  +.+.. ...+.... .........+......     +............. .
T Consensus       163 ~---------~~~--------~~~~~--~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  216 (303)
T 3pe6_A          163 A---------AKV--------LNSVL--PNLSS-GPIDSSVL-SRNKTEVDIYNSDPLI-----CRAGLKVCFGIQLLNA  216 (303)
T ss_dssp             H---------HHH--------HHTTC--CSCCC-CCCCGGGT-CSCHHHHHHHHTCTTS-----CCSCCCHHHHHHHHHH
T ss_pred             H---------HHH--------HHHhc--ccccC-Cccchhhh-hcchhHHHHhccCccc-----cccchhhhhHHHHHHH
Confidence            0         000        00000  00000 00000000 0001111111110000     00000000000000 0


Q ss_pred             hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cc---hHHHHHHHHHHHHh
Q psy463          713 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VR---PHFYHTLERFLDSC  788 (790)
Q Consensus       713 ~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~---~~~~~~i~~fl~~~  788 (790)
                      .......+.++ ++|+|+++|++|..++.+.++.+++.+...  .++++++++++|.+.. .+   .++.+.+.+||+++
T Consensus       217 ~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~  293 (303)
T 3pe6_A          217 VSRVERALPKL-TVPFLLLQGSADRLCDSKGAYLLMELAKSQ--DKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR  293 (303)
T ss_dssp             HHHHHHHGGGC-CSCEEEEEETTCSSBCHHHHHHHHHHCCCS--SEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhcC-CCCEEEEeeCCCCCCChHHHHHHHHhcccC--CceEEEeCCCccceeccchHHHHHHHHHHHHHHhcc
Confidence            11222556788 999999999999999999999998887632  4689999999999886 33   46777889999887


Q ss_pred             h
Q psy463          789 F  789 (790)
Q Consensus       789 l  789 (790)
                      +
T Consensus       294 ~  294 (303)
T 3pe6_A          294 T  294 (303)
T ss_dssp             T
T ss_pred             C
Confidence            5

>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}

Probab=99.76  E-value=7.9e-18  Score=169.71  Aligned_cols=246  Identities=12%  Similarity=0.031  Sum_probs=152.3

Q ss_pred             eEEEEEEc-CCCcEEEEEEEeCCCCCC--CCCCCccEEEEEcCCCCccccccccccc-hHHHHHhcCCeEEEEEcCCCCC
Q psy463          470 VEYMSVPI-QPNMEAQVKLFLPPGIDT--SGHKKYPLLIHVYGGPSSFQVTERFSVD-WNLYLADNKDIVVAYIDGRNSA  545 (790)
Q Consensus       470 ~~~~~~~~-~dg~~i~~~~~~P~~~~~--~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~~~~~~~~G~~v~~~d~rG~~  545 (790)
                      .+.+++.+ ..|..+.+.++.|.++..  .+.+++|+||++||+++..   ..|... ....++++.|+.|+.+|+++++
T Consensus         7 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~   83 (263)
T 2uz0_A            7 VMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNH---NSWLKRTNVERLLRGTNLIVVMPNTSNGW   83 (263)
T ss_dssp             EEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCT---THHHHHSCHHHHTTTCCCEEEECCCTTST
T ss_pred             EeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCH---HHHHhccCHHHHHhcCCeEEEEECCCCCc
Confidence            34556654 357899999999987510  0246789999999998763   333321 2445566689999999998765


Q ss_pred             CChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc
Q psy463          546 LKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY  625 (790)
Q Consensus       546 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~  625 (790)
                      .......    ..+.....+|+...++.+.. ...+|.++++|+|||+||.+++.++. +|+ .++++++.+|..++...
T Consensus        84 ~~~~~~~----~~~~~~~~~~~~~~i~~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~-~~~~~v~~~~~~~~~~~  156 (263)
T 2uz0_A           84 YTDTQYG----FDYYTALAEELPQVLKRFFP-NMTSKREKTFIAGLSMGGYGCFKLAL-TTN-RFSHAASFSGALSFQNF  156 (263)
T ss_dssp             TSBCTTS----CBHHHHHHTHHHHHHHHHCT-TBCCCGGGEEEEEETHHHHHHHHHHH-HHC-CCSEEEEESCCCCSSSC
T ss_pred             cccCCCc----ccHHHHHHHHHHHHHHHHhc-cccCCCCceEEEEEChHHHHHHHHHh-Ccc-ccceEEEecCCcchhhc
Confidence            4221100    00001113344443433221 12357789999999999999999998 775 89999999998765431


Q ss_pred             cccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463          626 DTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE  705 (790)
Q Consensus       626 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  705 (790)
                      ...    . ...  +. .                                     .....+.  +..             
T Consensus       157 ~~~----~-~~~--~~-~-------------------------------------~~~~~~~--~~~-------------  176 (263)
T 2uz0_A          157 SPE----S-QNL--GS-P-------------------------------------AYWRGVF--GEI-------------  176 (263)
T ss_dssp             CGG----G-TTC--SC-H-------------------------------------HHHHHHH--CCC-------------
T ss_pred             ccc----c-ccc--cc-c-------------------------------------hhHHHHc--CCh-------------
Confidence            100    0 000  00 0                                     0000000  000             


Q ss_pred             CcchhhhhhhhhhhhhccCC-ccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHH
Q psy463          706 DNLEGYKIAALNNKVDRIRD-KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERF  784 (790)
Q Consensus       706 ~~~~~~~~~~~~~~~~~i~~-~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~f  784 (790)
                       ....+...++...++++.. +|+|++||+.|..++  .+..+++.+++.|.++++.++|| +|.+. .....++.+.+|
T Consensus       177 -~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~g-~H~~~-~~~~~~~~~~~~  251 (263)
T 2uz0_A          177 -RDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFDVTYSHSAG-THEWY-YWEKQLEVFLTT  251 (263)
T ss_dssp             -SCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEESC-CSSHH-HHHHHHHHHHHH
T ss_pred             -hhhccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCCeEEEECCC-CcCHH-HHHHHHHHHHHH
Confidence             0011222334455666632 899999999999884  56899999999999999999999 99764 235677889999


Q ss_pred             HHHhhC
Q psy463          785 LDSCFA  790 (790)
Q Consensus       785 l~~~l~  790 (790)
                      |.++|+
T Consensus       252 l~~~l~  257 (263)
T 2uz0_A          252 LPIDFK  257 (263)
T ss_dssp             SSSCCC
T ss_pred             HHhhcc
Confidence            987764

>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}

Probab=99.76  E-value=3.8e-17  Score=169.24  Aligned_cols=275  Identities=13%  Similarity=0.075  Sum_probs=152.9

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+++.. +|..+....+.+..    ..+..|+||++||.+++.   ..|.  .....++++||.|+++|+||+|.+.
T Consensus        19 ~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~p~vv~~hG~~~~~---~~~~--~~~~~l~~~g~~v~~~d~~G~G~s~   88 (315)
T 4f0j_A           19 PVHYLDFTS-QGQPLSMAYLDVAP----KKANGRTILLMHGKNFCA---GTWE--RTIDVLADAGYRVIAVDQVGFCKSS   88 (315)
T ss_dssp             CCEEEEEEE-TTEEEEEEEEEECC----SSCCSCEEEEECCTTCCG---GGGH--HHHHHHHHTTCEEEEECCTTSTTSC
T ss_pred             cceeEEEec-CCCCeeEEEeecCC----CCCCCCeEEEEcCCCCcc---hHHH--HHHHHHHHCCCeEEEeecCCCCCCC
Confidence            345566665 55555544433322    234568999999988763   2333  2234455579999999999987654


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc-
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT-  627 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~-  627 (790)
                      ...       .....++++.+.+..+++..   +.++++|+|||+||.+++.++.++|. .++++++.+|......... 
T Consensus        89 ~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~  157 (315)
T 4f0j_A           89 KPA-------HYQYSFQQLAANTHALLERL---GVARASVIGHSMGGMLATRYALLYPR-QVERLVLVNPIGLEDWKALG  157 (315)
T ss_dssp             CCS-------SCCCCHHHHHHHHHHHHHHT---TCSCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCSCSSCHHHHT
T ss_pred             CCC-------ccccCHHHHHHHHHHHHHHh---CCCceEEEEecHHHHHHHHHHHhCcH-hhheeEEecCcccCCccccc
Confidence            321       11345778777787777743   45799999999999999999999885 8999999988643211000 


Q ss_pred             -------cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccC
Q psy463          628 -------IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMG  700 (790)
Q Consensus       628 -------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~  700 (790)
                             .+....+..     ........     .....        ......................... .......
T Consensus       158 ~~~~~~~~~~~~~~~~-----~~~~~~~~-----~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  218 (315)
T 4f0j_A          158 VPWRSVDDWYRRDLQT-----SAEGIRQY-----QQATY--------YAGEWRPEFDRWVQMQAGMYRGKGR-ESVAWNS  218 (315)
T ss_dssp             CCCCCHHHHHHHHTTC-----CHHHHHHH-----HHHHT--------STTCCCGGGHHHHHHHHHHTTSTTH-HHHHHHH
T ss_pred             chhhhhHHHHhhcccC-----ChHHHHHH-----HHHHH--------hccccCCchHHHHHHHHHHhhccCc-chhhHHH
Confidence                   000000000     00000000     00000        0000000000001111000000000 0000000


Q ss_pred             CCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhh------------HHHHHHHHhcCCceEEEEcCCCCC
Q psy463          701 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQS------------MMLAKSLQHADIMFQSQTYPDEEH  768 (790)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~------------~~l~~~l~~~g~~~~~~~~p~~~H  768 (790)
                          ...............+.++ ++|+|+++|++|..+|....            .+..+.+.+....++++++++++|
T Consensus       219 ----~~~~~~~~~~~~~~~l~~~-~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH  293 (315)
T 4f0j_A          219 ----ALTYDMIFTQPVVYELDRL-QMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGH  293 (315)
T ss_dssp             ----HHHHHHHHHCCCGGGGGGC-CSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCS
T ss_pred             ----HHhcCccccchhhhhcccC-CCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCc
Confidence                0000000111223567788 99999999999999995444            444455555445679999999999


Q ss_pred             cCCC-cchHHHHHHHHHHHHh
Q psy463          769 GLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       769 ~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      .+.. +++++.+.|.+||+++
T Consensus       294 ~~~~~~p~~~~~~i~~fl~~~  314 (315)
T 4f0j_A          294 TPQIQAPERFHQALLEGLQTQ  314 (315)
T ss_dssp             CHHHHSHHHHHHHHHHHHCC-
T ss_pred             chhhhCHHHHHHHHHHHhccC
Confidence            9877 8889999999999753

>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13

Probab=99.76  E-value=3.2e-17  Score=168.30  Aligned_cols=237  Identities=12%  Similarity=0.061  Sum_probs=138.2

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCC-CCCh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS-ALKG  548 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~-~~~g  548 (790)
                      ++...+...||.+++++.+.|.+.   .....|+||++||.+++.   ..|.  .....++++||.|+++|+||+ |.+.
T Consensus         7 ~~~~~i~~~dG~~l~~~~~~p~~~---~~~~~~~VvllHG~g~~~---~~~~--~~~~~L~~~G~~Vi~~D~rGh~G~S~   78 (305)
T 1tht_A            7 TIAHVLRVNNGQELHVWETPPKEN---VPFKNNTILIASGFARRM---DHFA--GLAEYLSTNGFHVFRYDSLHHVGLSS   78 (305)
T ss_dssp             CEEEEEEETTTEEEEEEEECCCTT---SCCCSCEEEEECTTCGGG---GGGH--HHHHHHHTTTCCEEEECCCBCC----
T ss_pred             ceEEEEEcCCCCEEEEEEecCccc---CCCCCCEEEEecCCccCc---hHHH--HHHHHHHHCCCEEEEeeCCCCCCCCC
Confidence            345567777999999999887531   123458899999988762   3333  233455557999999999997 6543


Q ss_pred             hhhHhhhhccCC-ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc
Q psy463          549 NTLKYAGYRRLG-TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT  627 (790)
Q Consensus       549 ~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~  627 (790)
                      ....     .+. ...++|+.++++++.. .+   ..+++|+||||||.+++.++.+ |  .++++++.++..++...  
T Consensus        79 ~~~~-----~~~~~~~~~D~~~~~~~l~~-~~---~~~~~lvGhSmGG~iA~~~A~~-~--~v~~lvl~~~~~~~~~~--  144 (305)
T 1tht_A           79 GSID-----EFTMTTGKNSLCTVYHWLQT-KG---TQNIGLIAASLSARVAYEVISD-L--ELSFLITAVGVVNLRDT--  144 (305)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHHHH-TT---CCCEEEEEETHHHHHHHHHTTT-S--CCSEEEEESCCSCHHHH--
T ss_pred             Cccc-----ceehHHHHHHHHHHHHHHHh-CC---CCceEEEEECHHHHHHHHHhCc-c--CcCEEEEecCchhHHHH--
Confidence            2211     111 1235677777787764 43   4789999999999999999987 5  57777777775443210  


Q ss_pred             cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc
Q psy463          628 IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN  707 (790)
Q Consensus       628 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  707 (790)
                        ....+...        +...    ....+.  ..+...   ....   ....+..........             . 
T Consensus       145 --~~~~~~~~--------~~~~----~~~~~~--~~~~~~---~~~~---~~~~~~~~~~~~~~~-------------~-  188 (305)
T 1tht_A          145 --LEKALGFD--------YLSL----PIDELP--NDLDFE---GHKL---GSEVFVRDCFEHHWD-------------T-  188 (305)
T ss_dssp             --HHHHHSSC--------GGGS----CGGGCC--SEEEET---TEEE---EHHHHHHHHHHTTCS-------------S-
T ss_pred             --HHHHhhhh--------hhhc----chhhCc--cccccc---cccc---CHHHHHHHHHhcccc-------------c-
Confidence              00000000        0000    000000  000000   0000   011111111111000             0 


Q ss_pred             chhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          708 LEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       708 ~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                           .......+.++ ++|+|++||++|..+|+..+..+++.+...  .++++++|++||.+..
T Consensus       189 -----~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~i~~~--~~~l~~i~~agH~~~e  245 (305)
T 1tht_A          189 -----LDSTLDKVANT-SVPLIAFTANNDDWVKQEEVYDMLAHIRTG--HCKLYSLLGSSHDLGE  245 (305)
T ss_dssp             -----HHHHHHHHTTC-CSCEEEEEETTCTTSCHHHHHHHHTTCTTC--CEEEEEETTCCSCTTS
T ss_pred             -----hhhHHHHHhhc-CCCEEEEEeCCCCccCHHHHHHHHHhcCCC--CcEEEEeCCCCCchhh
Confidence                 00122457788 999999999999999999988887765432  4689999999999864

>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}

Probab=99.75  E-value=1.6e-17  Score=173.02  Aligned_cols=232  Identities=9%  Similarity=-0.019  Sum_probs=146.9

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      +.++++.|.+      .+.|+||++|||+........|. .+...++.+.||.|+++|+||++.....           .
T Consensus        84 ~~~~~~~p~~------~~~p~vv~lHGgg~~~~~~~~~~-~~~~~la~~~g~~vi~~D~r~~~~~~~~-----------~  145 (326)
T 3d7r_A           84 MQVFRFNFRH------QIDKKILYIHGGFNALQPSPFHW-RLLDKITLSTLYEVVLPIYPKTPEFHID-----------D  145 (326)
T ss_dssp             EEEEEEESTT------CCSSEEEEECCSTTTSCCCHHHH-HHHHHHHHHHCSEEEEECCCCTTTSCHH-----------H
T ss_pred             EEEEEEeeCC------CCCeEEEEECCCcccCCCCHHHH-HHHHHHHHHhCCEEEEEeCCCCCCCCch-----------H
Confidence            5566777753      34689999999875322122222 2344555446999999999997654322           3


Q ss_pred             chhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCcccccccchhhhcCCCCc
Q psy463          563 EIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDWIYYDTIYSERYMGLPTF  639 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~  639 (790)
                      .++|+.++++++.++   ++.++++|+||||||.+|+.++.++|.   ..++++++.+|+.+.........+        
T Consensus       146 ~~~d~~~~~~~l~~~---~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~--------  214 (326)
T 3d7r_A          146 TFQAIQRVYDQLVSE---VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISD--------  214 (326)
T ss_dssp             HHHHHHHHHHHHHHH---HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCH--------
T ss_pred             HHHHHHHHHHHHHhc---cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHh--------
Confidence            478999999999884   667899999999999999999987653   138899999998664321100000        


Q ss_pred             cCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh-h
Q psy463          640 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN-N  718 (790)
Q Consensus       640 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  718 (790)
                           .+...                     +..........+...+.. +..      ...+          ..+++ .
T Consensus       215 -----~~~~~---------------------~~~~~~~~~~~~~~~~~~-~~~------~~~~----------~~~~~~~  251 (326)
T 3d7r_A          215 -----ALIEQ---------------------DAVLSQFGVNEIMKKWAN-GLP------LTDK----------RISPING  251 (326)
T ss_dssp             -----HHHHH---------------------CSSCCHHHHHHHHHHHHT-TSC------TTST----------TTSGGGS
T ss_pred             -----hhccc---------------------CcccCHHHHHHHHHHhcC-CCC------CCCC----------eECcccC
Confidence                 00000                     000011111111111110 000      0000          00111 1


Q ss_pred             hhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHHHHhhC
Q psy463          719 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       719 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl~~~l~  790 (790)
                      .+..+  +|+|+++|++|.  +...+..+.+.+++.+.+++++++|+++|.+..    ..+++.+.+.+||+++++
T Consensus       252 ~~~~~--~P~lii~G~~D~--~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~  323 (326)
T 3d7r_A          252 TIEGL--PPVYMFGGGREM--THPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT  323 (326)
T ss_dssp             CCTTC--CCEEEEEETTST--THHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred             CcccC--CCEEEEEeCccc--chHHHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence            12223  699999999996  445778899999999999999999999998764    566889999999988763

>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}

Probab=99.75  E-value=7.4e-17  Score=155.89  Aligned_cols=190  Identities=15%  Similarity=0.036  Sum_probs=144.2

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC---hhhhHhhh
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK---GNTLKYAG  555 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~---g~~~~~~~  555 (790)
                      +|.++++++|.|.+       +.|+||++||+++..   ..|........++++||.|+.+|++|.+.+   ....    
T Consensus        12 ~g~~l~~~~~~~~~-------~~~~vv~~hG~~~~~---~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~----   77 (207)
T 3bdi_A           12 NGTRVFQRKMVTDS-------NRRSIALFHGYSFTS---MDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYG----   77 (207)
T ss_dssp             TTEEEEEEEECCTT-------CCEEEEEECCTTCCG---GGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTC----
T ss_pred             CCcEEEEEEEeccC-------CCCeEEEECCCCCCc---cccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCC----
Confidence            89999999998863       458999999998763   233321033445558999999999997654   3210    


Q ss_pred             hccCCcc-chhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc
Q psy463          556 YRRLGTV-EIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM  634 (790)
Q Consensus       556 ~~~~~~~-~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~  634 (790)
                          ... ...+..+.+..++++.   +.++++++|||+||.+++.++.++|. .++++++.+|.....           
T Consensus        78 ----~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~~v~~~~~~~~~-----------  138 (207)
T 3bdi_A           78 ----IDRGDLKHAAEFIRDYLKAN---GVARSVIMGASMGGGMVIMTTLQYPD-IVDGIIAVAPAWVES-----------  138 (207)
T ss_dssp             ----CTTCCHHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCSCGG-----------
T ss_pred             ----CCcchHHHHHHHHHHHHHHc---CCCceEEEEECccHHHHHHHHHhCch-hheEEEEeCCccccc-----------
Confidence                112 5777777777777643   35799999999999999999998875 799999988852100           


Q ss_pred             CCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhh
Q psy463          635 GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIA  714 (790)
Q Consensus       635 g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  714 (790)
                                 +                                             .                      
T Consensus       139 -----------~---------------------------------------------~----------------------  140 (207)
T 3bdi_A          139 -----------L---------------------------------------------K----------------------  140 (207)
T ss_dssp             -----------G---------------------------------------------H----------------------
T ss_pred             -----------h---------------------------------------------h----------------------
Confidence                       0                                             0                      


Q ss_pred             hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                         ..+.++ ++|+|+++|++|..++++.+..+.+.++    ++++.++++++|.+.. .++++.+.+.+||++
T Consensus       141 ---~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~  206 (207)
T 3bdi_A          141 ---GDMKKI-RQKTLLVWGSKDHVVPIALSKEYASIIS----GSRLEIVEGSGHPVYIEKPEEFVRITVDFLRN  206 (207)
T ss_dssp             ---HHHTTC-CSCEEEEEETTCTTTTHHHHHHHHHHST----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred             ---HHHhhc-cCCEEEEEECCCCccchHHHHHHHHhcC----CceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence               334566 8999999999999999999988888774    4589999999999876 778899999999975

>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2

Probab=99.75  E-value=1.9e-17  Score=171.19  Aligned_cols=244  Identities=16%  Similarity=0.192  Sum_probs=155.6

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.+++...+| .+.+.+| +.      .++.|+||++||++........|. .+...++.+.||.|+.+|+||++.+.
T Consensus        55 ~~~~~~i~~~~g-~i~~~~y-~~------~~~~p~vv~~HGgg~~~g~~~~~~-~~~~~la~~~g~~Vv~~dyrg~g~~~  125 (311)
T 1jji_A           55 RVEDRTIKGRNG-DIRVRVY-QQ------KPDSPVLVYYHGGGFVICSIESHD-ALCRRIARLSNSTVVSVDYRLAPEHK  125 (311)
T ss_dssp             EEEEEEEEETTE-EEEEEEE-ES------SSSEEEEEEECCSTTTSCCTGGGH-HHHHHHHHHHTSEEEEEECCCTTTSC
T ss_pred             eEEEEEecCCCC-cEEEEEE-cC------CCCceEEEEECCcccccCChhHhH-HHHHHHHHHhCCEEEEecCCCCCCCC
Confidence            467788888778 7888888 42      356799999999984321123332 34445554579999999999988654


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhC--CCcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCcc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENL--PYIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDWI  623 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~~  623 (790)
                      ..           ...+|+.++++|+.++.  -.+|.++|+|+|||+||.+++.++.+.++   ..++++++.+|+.+..
T Consensus       126 ~p-----------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~  194 (311)
T 1jji_A          126 FP-----------AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFV  194 (311)
T ss_dssp             TT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSS
T ss_pred             CC-----------CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCC
Confidence            32           23678888888887631  12677799999999999999999887653   1499999999987653


Q ss_pred             cccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCC
Q psy463          624 YYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPT  703 (790)
Q Consensus       624 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  703 (790)
                      .....+.. +...+  .                                .........+...... ...           
T Consensus       195 ~~~~~~~~-~~~~~--~--------------------------------~~~~~~~~~~~~~~~~-~~~-----------  227 (311)
T 1jji_A          195 APTPSLLE-FGEGL--W--------------------------------ILDQKIMSWFSEQYFS-REE-----------  227 (311)
T ss_dssp             SCCHHHHH-TSSSC--S--------------------------------SCCHHHHHHHHHHHCS-SGG-----------
T ss_pred             CCCccHHH-hcCCC--c--------------------------------cCCHHHHHHHHHHhCC-CCc-----------
Confidence            21100000 00000  0                                0000000001110000 000           


Q ss_pred             cCCcchhhhhhhhh-hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cchH
Q psy463          704 FEDNLEGYKIAALN-NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRPH  776 (790)
Q Consensus       704 ~~~~~~~~~~~~~~-~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~~  776 (790)
                        ....  ...+++ ..+..+  .|+|+++|+.|..++  ++..+++.|++++.+++++++||++|.+..      ...+
T Consensus       228 --~~~~--~~~~p~~~~l~~~--~P~li~~G~~D~l~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~  299 (311)
T 1jji_A          228 --DKFN--PLASVIFADLENL--PPALIITAEYDPLRD--EGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARD  299 (311)
T ss_dssp             --GGGC--TTTSGGGSCCTTC--CCEEEEEEEECTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHH
T ss_pred             --cCCC--cccCcccccccCC--ChheEEEcCcCcchH--HHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHH
Confidence              0000  000111 122333  699999999999874  678899999999999999999999998864      3467


Q ss_pred             HHHHHHHHHHH
Q psy463          777 FYHTLERFLDS  787 (790)
Q Consensus       777 ~~~~i~~fl~~  787 (790)
                      +.+.+.+||++
T Consensus       300 ~~~~i~~fl~~  310 (311)
T 1jji_A          300 AINQIAALLVF  310 (311)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhh
Confidence            88899999875

>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A

Probab=99.75  E-value=1.7e-17  Score=177.87  Aligned_cols=248  Identities=14%  Similarity=0.133  Sum_probs=152.8

Q ss_pred             CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       468 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ...+.+.++. +|..+.++++.|.+     .++.|+||++||.++...   .+.. .....++++||.|+++|+||+|.+
T Consensus       166 ~~~~~v~i~~-~g~~l~~~~~~P~~-----~~~~P~vv~~hG~~~~~~---~~~~-~~~~~l~~~G~~V~~~D~~G~G~s  235 (415)
T 3mve_A          166 YIIKQLEIPF-EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSLQT---DMWR-LFRDHLAKHDIAMLTVDMPSVGYS  235 (415)
T ss_dssp             SEEEEEEEEC-SSSEEEEEEEESCS-----SSCEEEEEEECCTTSCGG---GGHH-HHHHTTGGGTCEEEEECCTTSGGG
T ss_pred             CCeEEEEEEE-CCEEEEEEEEecCC-----CCCCCEEEEECCCCccHH---HHHH-HHHHHHHhCCCEEEEECCCCCCCC
Confidence            3467778877 88999999999974     456899999999876521   1111 223445458999999999997754


Q ss_pred             hhhhHhhhhccCCccchhH-HHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc
Q psy463          548 GNTLKYAGYRRLGTVEIYD-QINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD  626 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D-~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~  626 (790)
                      ...   .    . .....+ ...+++++.. .+.+|..+|+|+|||+||++++.++..+|. +++++++.+|+.+.....
T Consensus       236 ~~~---~----~-~~~~~~~~~~v~~~l~~-~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~-~v~~~v~~~~~~~~~~~~  305 (415)
T 3mve_A          236 SKY---P----L-TEDYSRLHQAVLNELFS-IPYVDHHRVGLIGFRFGGNAMVRLSFLEQE-KIKACVILGAPIHDIFAS  305 (415)
T ss_dssp             TTS---C----C-CSCTTHHHHHHHHHGGG-CTTEEEEEEEEEEETHHHHHHHHHHHHTTT-TCCEEEEESCCCSHHHHC
T ss_pred             CCC---C----C-CCCHHHHHHHHHHHHHh-CcCCCCCcEEEEEECHHHHHHHHHHHhCCc-ceeEEEEECCcccccccc
Confidence            321   0    0 011222 2456666666 677888999999999999999999998875 899999999875422110


Q ss_pred             ccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCC
Q psy463          627 TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFED  706 (790)
Q Consensus       627 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  706 (790)
                      ..+..   ..+      ..+...    ....+.         .     .......+...+......              
T Consensus       306 ~~~~~---~~~------~~~~~~----~~~~~g---------~-----~~~~~~~~~~~~~~~~~~--------------  344 (415)
T 3mve_A          306 PQKLQ---QMP------KMYLDV----LASRLG---------K-----SVVDIYSLSGQMAAWSLK--------------  344 (415)
T ss_dssp             HHHHT---TSC------HHHHHH----HHHHTT---------C-----SSBCHHHHHHHGGGGCTT--------------
T ss_pred             HHHHH---HhH------HHHHHH----HHHHhC---------C-----CccCHHHHHHHHhhcCcc--------------
Confidence            00000   000      000000    000000         0     000000111111110000              


Q ss_pred             cchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH
Q psy463          707 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD  786 (790)
Q Consensus       707 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~  786 (790)
                            ...... +.++ ++|+|++||++|..+|+..+..+.+    .+.+++++++|+. +... ..+++...+.+||+
T Consensus       345 ------~~~~~~-~~~i-~~PvLii~G~~D~~vp~~~~~~l~~----~~~~~~l~~i~g~-~~h~-~~~~~~~~i~~fL~  410 (415)
T 3mve_A          345 ------VQGFLS-SRKT-KVPILAMSLEGDPVSPYSDNQMVAF----FSTYGKAKKISSK-TITQ-GYEQSLDLAIKWLE  410 (415)
T ss_dssp             ------TTTTTT-SSCB-SSCEEEEEETTCSSSCHHHHHHHHH----TBTTCEEEEECCC-SHHH-HHHHHHHHHHHHHH
T ss_pred             ------cccccc-cCCC-CCCEEEEEeCCCCCCCHHHHHHHHH----hCCCceEEEecCC-Cccc-chHHHHHHHHHHHH
Confidence                  000000 3577 8999999999999999999887766    3456799999982 2111 56788899999999


Q ss_pred             HhhC
Q psy463          787 SCFA  790 (790)
Q Consensus       787 ~~l~  790 (790)
                      ++|+
T Consensus       411 ~~L~  414 (415)
T 3mve_A          411 DELL  414 (415)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            9874

>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A

Probab=99.74  E-value=1.2e-17  Score=169.12  Aligned_cols=265  Identities=15%  Similarity=0.144  Sum_probs=141.0

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA  554 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~  554 (790)
                      +...||.++++..+.         . .|.||++||.+++   ...|..  ....++++||.|+++|+||+|.+....   
T Consensus         3 ~~~~~g~~l~y~~~G---------~-g~~vvllHG~~~~---~~~w~~--~~~~l~~~g~~vi~~D~~G~G~S~~~~---   64 (271)
T 3ia2_A            3 FVAKDGTQIYFKDWG---------S-GKPVLFSHGWLLD---ADMWEY--QMEYLSSRGYRTIAFDRRGFGRSDQPW---   64 (271)
T ss_dssp             EECTTSCEEEEEEES---------S-SSEEEEECCTTCC---GGGGHH--HHHHHHTTTCEEEEECCTTSTTSCCCS---
T ss_pred             EEcCCCCEEEEEccC---------C-CCeEEEECCCCCc---HHHHHH--HHHHHHhCCceEEEecCCCCccCCCCC---
Confidence            556689999887652         1 2458899998876   333432  223444579999999999987654321   


Q ss_pred             hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc
Q psy463          555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM  634 (790)
Q Consensus       555 ~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~  634 (790)
                           ....+++..+.+..+++.   ++.+++.|+||||||.+++.++..+++.+++++++.++..........+..   
T Consensus        65 -----~~~~~~~~a~d~~~~l~~---l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~---  133 (271)
T 3ia2_A           65 -----TGNDYDTFADDIAQLIEH---LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQ---  133 (271)
T ss_dssp             -----SCCSHHHHHHHHHHHHHH---HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTT---
T ss_pred             -----CCCCHHHHHHHHHHHHHH---hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcc---
Confidence                 113345555555555553   335789999999999977766665544589988888765432110000000   


Q ss_pred             CCCCccCchhhhhhc---cccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh
Q psy463          635 GLPTFEDNLEGYKIA---ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY  711 (790)
Q Consensus       635 g~~~~~~~~~~~~~~---~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  711 (790)
                      +.+  ......+...   ........+. .+..  .......+..................          ........+
T Consensus       134 ~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~  198 (271)
T 3ia2_A          134 GVP--LDVFARFKTELLKDRAQFISDFN-APFY--GINKGQVVSQGVQTQTLQIALLASLK----------ATVDCVTAF  198 (271)
T ss_dssp             SBC--HHHHHHHHHHHHHHHHHHHHHHH-HHHH--TGGGTCCCCHHHHHHHHHHHHHSCHH----------HHHHHHHHH
T ss_pred             ccc--HHHHHHHHHHHHhhHHHHHHHhh-Hhhh--ccccccccCHHHHHHHHhhhhhccHH----------HHHHHHHHh
Confidence            000  0000000000   0000000000 0000  00000000000000000000000000          000000011


Q ss_pred             hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          712 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       712 ~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ........+.++ ++|+|++||++|..+|++.+.++...+..   ..++.++|++||.+.. .++++.+.+.+||++
T Consensus       199 ~~~~~~~~l~~i-~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~  271 (271)
T 3ia2_A          199 AETDFRPDMAKI-DVPTLVIHGDGDQIVPFETTGKVAAELIK---GAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR  271 (271)
T ss_dssp             HHCBCHHHHTTC-CSCEEEEEETTCSSSCGGGTHHHHHHHST---TCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred             hccCCcccccCC-CCCEEEEEeCCCCcCChHHHHHHHHHhCC---CceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence            111222456788 99999999999999999886655544422   3589999999999887 889999999999863

>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}

Probab=99.74  E-value=1.7e-17  Score=173.74  Aligned_cols=296  Identities=12%  Similarity=-0.027  Sum_probs=158.2

Q ss_pred             eEEEEEEcCC--C--cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc----cchHHHHHh-cCCeEEEEEc
Q psy463          470 VEYMSVPIQP--N--MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS----VDWNLYLAD-NKDIVVAYID  540 (790)
Q Consensus       470 ~~~~~~~~~d--g--~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~----~~~~~~~~~-~~G~~v~~~d  540 (790)
                      ...+.+.+.|  |  ..+.++++.|.+    ..++.|+|++.||.........++.    ..+.. .++ ++||+|+++|
T Consensus        43 ~~~i~Y~s~d~~G~~~~~~g~l~~P~~----~~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~-~lal~~Gy~Vv~~D  117 (377)
T 4ezi_A           43 LYKINYKTQSPDGNLTIASGLVAMPIH----PVGQVGIISYQHGTRFERNDVPSRNNEKNYIYLA-AYGNSAGYMTVMPD  117 (377)
T ss_dssp             EEEEEEEEECTTSCEEEEEEEEEEESS----CSSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHH-HHTTTTCCEEEEEC
T ss_pred             EEEEEEEEECCCCCEEEEEEEEEECCC----CCCCCcEEEEeCCCcCCcccCCCcCcccchHHHH-HHHHhCCcEEEEeC
Confidence            4456666554  4  468899999986    2367899999999875321111111    11222 344 6999999999


Q ss_pred             CCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC----CCceEEEEEe
Q psy463          541 GRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP----SNVFKCGISV  616 (790)
Q Consensus       541 ~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p----~~~~~~~v~~  616 (790)
                      +||.|.++...............+.|...++..+....+..+..||+++||||||+++++++..+|    +-.++++++.
T Consensus       118 ~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~  197 (377)
T 4ezi_A          118 YLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPG  197 (377)
T ss_dssp             CTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEE
T ss_pred             CCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEec
Confidence            999887653110000000011223444444444443344335689999999999999999887654    3368899999


Q ss_pred             CCCCCcccccccchhhhcCCCCcc-CchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc---
Q psy463          617 APVTDWIYYDTIYSERYMGLPTFE-DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM---  692 (790)
Q Consensus       617 ~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~---  692 (790)
                      +++.++........    +.+... .....|....+. -..+.  .|      ..+.... .....+.+.+...-..   
T Consensus       198 ~~p~dl~~~~~~~~----~~~~~~~~~~~g~~~~~~~-g~~~~--yp------~~~~~l~-~~~~~~~~~~~~~~~~~~~  263 (377)
T 4ezi_A          198 SAPYGWEETMHFVM----LEPGPRATAYLAYFFYSLQ-TYKSY--WS------GFDEIFA-PPYNTLIPELMDGYHAVDE  263 (377)
T ss_dssp             SCCCCHHHHHHHHH----HSCCTTHHHHHHHHHHHHH-HHHCC--SS------CHHHHBC-TTHHHHHHHHTSSCSCHHH
T ss_pred             CcccCHHHHHHHHh----cCCCcccchhHHHHHHHHH-HHHHh--cc------CHHHHhC-HHHHHHHHHHhhcccchhh
Confidence            99888653211110    000000 000011000000 00000  00      0000000 0111111111100000   


Q ss_pred             ------hhcccccCCC--------CcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCce
Q psy463          693 ------FQSQRYMGLP--------TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF  758 (790)
Q Consensus       693 ------~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~  758 (790)
                            .....+...+        ..+.......+..+.  -..+ ++|+|++||+.|.+||+.++..+++.+++.|. +
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~--~~~~-~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v  339 (377)
T 4ezi_A          264 ILQALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNHY--DFKP-TAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-F  339 (377)
T ss_dssp             HHHHSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHHCCC--CSCC-SSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-C
T ss_pred             hhhccCCCHHHHhchhhhhhcccccchHHHHHHHHhccc--CCCC-CCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-E
Confidence                  0000000000        000000001111110  1134 89999999999999999999999999999999 9


Q ss_pred             EEEEcCC--CCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          759 QSQTYPD--EEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       759 ~~~~~p~--~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      +++.+|+  .+|...  .......+.+||+++++
T Consensus       340 ~~~~~~~~~~~H~~~--~~~~~~~~~~wl~~~~~  371 (377)
T 4ezi_A          340 VWIKSVSDALDHVQA--HPFVLKEQVDFFKQFER  371 (377)
T ss_dssp             EEEEESCSSCCTTTT--HHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCCCCCCccCh--HHHHHHHHHHHHHHhhc
Confidence            9999999  889764  45667888999988753

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.74  E-value=2.9e-16  Score=183.64  Aligned_cols=322  Identities=14%  Similarity=0.141  Sum_probs=195.6

Q ss_pred             cccccCCCcceeEeeeec-cc--ceeEEEEeeCCCCeeeEEEeecCCC---------------Ccc----ccCCcccccc
Q psy463           61 LSRVNWANESVVAAWVNR-VQ--NRARITRCSINEGTCDVVFSRDLDR---------------GWF----EPFDHLRFSS  118 (790)
Q Consensus        61 ~~~~~w~~~~~~~~~~~r-~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~----~~~~~~~~sp  118 (790)
                      ...+.|++|++.+.+... ..  ....+.+++..+++++.+.......               .+-    .....++|||
T Consensus        39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp  118 (741)
T 2ecf_A           39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP  118 (741)
T ss_dssp             CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred             CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence            455789999987777665 22  2457788899888877766543211               000    0124689999


Q ss_pred             CCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCC
Q psy463          119 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGST  198 (790)
Q Consensus       119 dg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (790)
                      ||++|+|.+.              .+||+++++++..   ....+++.....+. -..|+|+++. ++|.+.        
T Consensus       119 Dg~~l~~~~~--------------~~i~~~d~~~~~~---~~~~~l~~~~~~~~-~~~~SPDG~~-la~~~~--------  171 (741)
T 2ecf_A          119 DAQRLLFPLG--------------GELYLYDLKQEGK---AAVRQLTHGEGFAT-DAKLSPKGGF-VSFIRG--------  171 (741)
T ss_dssp             TSSEEEEEET--------------TEEEEEESSSCST---TSCCBCCCSSSCEE-EEEECTTSSE-EEEEET--------
T ss_pred             CCCEEEEEeC--------------CcEEEEECCCCCc---ceEEEcccCCcccc-cccCCCCCCE-EEEEeC--------
Confidence            9999999874              2899999987710   01345555543333 3578888764 666643        


Q ss_pred             CccccceeEEEecCCcccccCcCCccccccccc-e-eehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccC--------
Q psy463          199 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT-V-TEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQ--------  268 (790)
Q Consensus       199 ~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~-~-~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~--------  268 (790)
                           ..||++++++++.      .+++.+... + .+...|...  ........+.|||||+.+++...+.        
T Consensus       172 -----~~i~~~d~~~g~~------~~~~~~~~~~~~~g~~~~v~~--~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~  238 (741)
T 2ecf_A          172 -----RNLWVIDLASGRQ------MQLTADGSTTIGNGIAEFVAD--EEMDRHTGYWWAPDDSAIAYARIDESPVPVQKR  238 (741)
T ss_dssp             -----TEEEEEETTTTEE------EECCCCCCSSEEESCCCHHHH--HHSCCCCSEEECTTSSCEEEEEEECTTSCEEEE
T ss_pred             -----CcEEEEecCCCCE------EEeccCCccceeccccceeee--eccccccceEECCCCCEEEEEEEcCCCCceEec
Confidence                 4899999998763      333310000 0 000000000  0000135689999999544443221        


Q ss_pred             ----------------------cceEEEEEECCC-CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          269 ----------------------NRARITRCSINE-GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       269 ----------------------~~~~i~~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                                            ....|+++|+++ ++++.+........+   ...+.| |||+.|++...   +...  
T Consensus       239 ~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~-pDg~~l~~~~~---~~~~--  309 (741)
T 2ecf_A          239 YEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIY---LARVNW-RDPQHLSFQRQ---SRDQ--  309 (741)
T ss_dssp             EEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEE---EEEEEE-EETTEEEEEEE---ETTS--
T ss_pred             CCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceE---EEEEEe-CCCCEEEEEEe---cccC--
Confidence                                  123799999999 887665432111111   347899 99999996654   2222  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeE----EeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT----VTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~----~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                         ....|+++|+++++      .+.+......    ....+.|+|||+ +++.+....  ..+||.+++.+  + .+.|
T Consensus       310 ---~~~~i~~~d~~~g~------~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g--~~~l~~~~~~~--~-~~~l  374 (741)
T 2ecf_A          310 ---KKLDLVEVTLASNQ------QRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG--FQHLYRIDSKG--K-AAAL  374 (741)
T ss_dssp             ---SEEEEEEEETTTCC------EEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS--SCEEEEECSSS--C-EEES
T ss_pred             ---CeEEEEEEECCCCc------eEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC--ccEEEEEcCCC--C-eeee
Confidence               14689999999887      5554332110    112378999999 666665521  27899999876  4 5566


Q ss_pred             eecccccCCCcccEEEE-EEecCCcEEEEEeecCC--CCeEEEEecCCCeEEEec
Q psy463          402 TCDLLTSANQKCSYSGA-TFSTNVSYYVLSCIGPG--IPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~-~~s~dg~~~~~~~~~~~--~~~i~~~~~~~~~~~~l~  453 (790)
                      +.       +...+..+ .|||||+++++.....+  .-.||.++..++..+.++
T Consensus       375 ~~-------~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~  422 (741)
T 2ecf_A          375 TH-------GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS  422 (741)
T ss_dssp             CC-------SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC
T ss_pred             ee-------cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc
Confidence            65       34556565 59999999988876555  345777776665555554

>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A

Probab=99.74  E-value=4.4e-17  Score=162.57  Aligned_cols=224  Identities=11%  Similarity=0.016  Sum_probs=143.7

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh-hhhHhh-hhccCCccchhHHHHHHHHHHHh
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG-NTLKYA-GYRRLGTVEIYDQINVTRYLQEN  577 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g-~~~~~~-~~~~~~~~~~~D~~~~~~~l~~~  577 (790)
                      +.|+||++||.+++.   ..|  ......++++||.|+++|+||+|.+. ...... ..    ...++|+.++++++.. 
T Consensus        21 ~~~~vv~~HG~~~~~---~~~--~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~----~~~~~d~~~~i~~l~~-   90 (251)
T 3dkr_A           21 TDTGVVLLHAYTGSP---NDM--NFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNP----DIWWAESSAAVAHMTA-   90 (251)
T ss_dssp             SSEEEEEECCTTCCG---GGG--HHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCH----HHHHHHHHHHHHHHHT-
T ss_pred             CCceEEEeCCCCCCH---HHH--HHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccH----HHHHHHHHHHHHHHHH-
Confidence            457889999988763   233  23334455589999999999988763 221111 11    1226777788888876 


Q ss_pred             CCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhh
Q psy463          578 LPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDR  657 (790)
Q Consensus       578 ~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  657 (790)
                      .    ..+++++|||+||.+++.++.++|. .++++++.+|..............+             ...    ....
T Consensus        91 ~----~~~~~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~p~~~~~~~~~~~~~~~-------------~~~----~~~~  148 (251)
T 3dkr_A           91 K----YAKVFVFGLSLGGIFAMKALETLPG-ITAGGVFSSPILPGKHHLVPGFLKY-------------AEY----MNRL  148 (251)
T ss_dssp             T----CSEEEEEESHHHHHHHHHHHHHCSS-CCEEEESSCCCCTTCBCHHHHHHHH-------------HHH----HHHH
T ss_pred             h----cCCeEEEEechHHHHHHHHHHhCcc-ceeeEEEecchhhccchhhHHHHHH-------------HHH----HHhh
Confidence            2    4799999999999999999999886 8899998888765321100000000             000    0000


Q ss_pred             ccCCcEEEEeecCCCccChhhH-HHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCC
Q psy463          658 IRDKQYLLVHGTMDDNVHFQQS-MMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMD  736 (790)
Q Consensus       658 ~~~~p~l~~~g~~d~~v~~~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D  736 (790)
                      ....+            ..... ......+....                   . ........+.++ ++|+|+++|++|
T Consensus       149 ~~~~~------------~~~~~~~~~~~~~~~~~-------------------~-~~~~~~~~~~~~-~~P~l~i~g~~D  195 (251)
T 3dkr_A          149 AGKSD------------ESTQILAYLPGQLAAID-------------------Q-FATTVAADLNLV-KQPTFIGQAGQD  195 (251)
T ss_dssp             HTCCC------------CHHHHHHHHHHHHHHHH-------------------H-HHHHHHHTGGGC-CSCEEEEEETTC
T ss_pred             cccCc------------chhhHHhhhHHHHHHHH-------------------H-HHHHHhcccccc-CCCEEEEecCCC
Confidence            00000            00000 00000000000                   0 000122556778 899999999999


Q ss_pred             cccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhh
Q psy463          737 DNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       737 ~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l  789 (790)
                      ..+|++.+..+++.+... .+++++++++++|.+..  +++++.+.+.+||++..
T Consensus       196 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~  249 (251)
T 3dkr_A          196 ELVDGRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQEN  249 (251)
T ss_dssp             SSBCTTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTTC
T ss_pred             cccChHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhHHHHHHHHHHHhhc
Confidence            999999999999998874 46799999999999976  48899999999998753

>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*

Probab=99.74  E-value=2.3e-17  Score=175.87  Aligned_cols=296  Identities=12%  Similarity=0.113  Sum_probs=160.0

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc----hHHHHHhcCCeEEEEEcCCCCC
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD----WNLYLADNKDIVVAYIDGRNSA  545 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~----~~~~~~~~~G~~v~~~d~rG~~  545 (790)
                      .+...+...||..+.++.+.|......+.+..|+||++||.+++.   ..|...    .....++++||.|+++|+||+|
T Consensus        27 ~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~---~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G  103 (377)
T 1k8q_A           27 AEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA---TNWISNLPNNSLAFILADAGYDVWLGNSRGNT  103 (377)
T ss_dssp             CEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG---GGGSSSCTTTCHHHHHHHTTCEEEECCCTTST
T ss_pred             ceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCch---hhhhcCCCcccHHHHHHHCCCCEEEecCCCCC
Confidence            466778888999999988866531000013568999999988763   233221    1122445579999999999987


Q ss_pred             CChhhhHhhhh-c---cCCc-cchh-HHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC--ceEEEEEeC
Q psy463          546 LKGNTLKYAGY-R---RLGT-VEIY-DQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN--VFKCGISVA  617 (790)
Q Consensus       546 ~~g~~~~~~~~-~---~~~~-~~~~-D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~--~~~~~v~~~  617 (790)
                      .+......... .   .+.. .... |+.++++++.++.   +..+++++||||||.+++.++.++|+.  +++++++.+
T Consensus       104 ~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~---~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~  180 (377)
T 1k8q_A          104 WARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT---GQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALA  180 (377)
T ss_dssp             TSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH---CCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEES
T ss_pred             CCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc---CcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeC
Confidence            65431000000 0   1111 1233 7777888877643   357899999999999999999988741  689999999


Q ss_pred             CCCCcccccccch----------hhhcCCCCccCchhhhhhccccchhhhccCCc---------EEEEeecCCCccC---
Q psy463          618 PVTDWIYYDTIYS----------ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQ---------YLLVHGTMDDNVH---  675 (790)
Q Consensus       618 ~~~~~~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~l~~~g~~d~~v~---  675 (790)
                      |...+......+.          ...++.............     ....+...+         +....+.......   
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (377)
T 1k8q_A          181 PVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQF-----LATEVCSRETVDLLCSNALFIICGFDTMNLNMSR  255 (377)
T ss_dssp             CCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHH-----HHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGG
T ss_pred             CchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHH-----HHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHH
Confidence            8765432111110          001110000000000000     000000000         0000000000000   


Q ss_pred             -------------hhhHHHHHHHHHhcCcchhcccccCCCCcCC---cchhhhhh-hhhhhhhccCCccEEEEecCCCcc
Q psy463          676 -------------FQQSMMLAKSLQHADIMFQSQRYMGLPTFED---NLEGYKIA-ALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       676 -------------~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                                   ......+..........       .. .+..   ....+... .+...+.++ ++|+|++||++|..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~  326 (377)
T 1k8q_A          256 LDVYLSHNPAGTSVQNVLHWSQAVKSGKFQ-------AF-DWGSPVQNMMHYHQSMPPYYNLTDM-HVPIAVWNGGNDLL  326 (377)
T ss_dssp             HHHHHTTCCCCEEHHHHHHHHHHHHHCSCB-------CC-CCSSHHHHHHHHSSSSCCBCCGGGC-CSCEEEEEETTCSS
T ss_pred             HHHHhccCCCCccHHHHHHHHHHHhcCCee-------ec-cCCcchhhHHHcCCCCCcccCHhhC-CCCEEEEEeCCCcc
Confidence                         00000000110000000       00 0000   00001000 112347888 99999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCC----CcchHHHHHHHHHHHHh
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLI----GVRPHFYHTLERFLDSC  788 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~----~~~~~~~~~i~~fl~~~  788 (790)
                      +|++.+..+++.++..   .+++++|++||...    ..++++.+.|.+||+++
T Consensus       327 ~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~  377 (377)
T 1k8q_A          327 ADPHDVDLLLSKLPNL---IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD  377 (377)
T ss_dssp             SCHHHHHHHHTTCTTE---EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred             cCHHHHHHHHHhCcCc---ccEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence            9999999888877654   14889999999876    26788999999999864

>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14

Probab=99.74  E-value=9.7e-17  Score=158.24  Aligned_cols=189  Identities=13%  Similarity=0.025  Sum_probs=131.0

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEE-------------------cCCCCCCChhhhHhhhhcc
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYI-------------------DGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~-------------------d~rG~~~~g~~~~~~~~~~  558 (790)
                      .++.|+||++||.++..   ..|.  .....+++.||.|+++                   |++|.. .........   
T Consensus        20 ~~~~~~vv~lHG~~~~~---~~~~--~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~-~~~~~~~~~---   90 (232)
T 1fj2_A           20 RKATAAVIFLHGLGDTG---HGWA--EAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLS-PDSQEDESG---   90 (232)
T ss_dssp             SCCSEEEEEECCSSSCH---HHHH--HHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCS-TTCCBCHHH---
T ss_pred             CCCCceEEEEecCCCcc---chHH--HHHHHHhcCCcEEEecCCCccccccccccccccccccccCC-cccccccHH---
Confidence            45679999999998762   2222  1223445579999998                   445431 110000000   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                       ....++++.+.++++.+ .+ +|.++++++|||+||.+++.++.++|. .++++++.+|.......          .+ 
T Consensus        91 -~~~~~~~~~~~i~~~~~-~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~-~v~~~i~~~~~~~~~~~----------~~-  155 (232)
T 1fj2_A           91 -IKQAAENIKALIDQEVK-NG-IPSNRIILGGFSQGGALSLYTALTTQQ-KLAGVTALSCWLPLRAS----------FP-  155 (232)
T ss_dssp             -HHHHHHHHHHHHHHHHH-TT-CCGGGEEEEEETHHHHHHHHHHTTCSS-CCSEEEEESCCCTTGGG----------SC-
T ss_pred             -HHHHHHHHHHHHHHHhc-CC-CCcCCEEEEEECHHHHHHHHHHHhCCC-ceeEEEEeecCCCCCcc----------cc-
Confidence             00224555555555554 33 677899999999999999999998875 88999999886432100          00 


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNN  718 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  718 (790)
                                                                         ...                         .
T Consensus       156 ---------------------------------------------------~~~-------------------------~  159 (232)
T 1fj2_A          156 ---------------------------------------------------QGP-------------------------I  159 (232)
T ss_dssp             ---------------------------------------------------SSC-------------------------C
T ss_pred             ---------------------------------------------------ccc-------------------------c
Confidence                                                               000                         1


Q ss_pred             hhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCc--eEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          719 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM--FQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       719 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~--~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      .+.++ ++|+|+++|++|..++.+.++.+++.+++.+.+  ++++++++++|.+.   .+..+.+.+||+++|+
T Consensus       160 ~~~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~---~~~~~~i~~~l~~~l~  229 (232)
T 1fj2_A          160 GGANR-DISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC---QQEMMDVKQFIDKLLP  229 (232)
T ss_dssp             CSTTT-TCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC---HHHHHHHHHHHHHHSC
T ss_pred             ccccC-CCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccC---HHHHHHHHHHHHHhcC
Confidence            23455 899999999999999999999999999988854  89999999999984   3445899999998874

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.74  E-value=2e-15  Score=182.79  Aligned_cols=352  Identities=10%  Similarity=0.047  Sum_probs=213.7

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCc-cccccCCCcceeEeeeecccceeEEE
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPV-LSRVNWANESVVAAWVNRVQNRARIT   86 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~~~~~~~~r~~~~~~~~   86 (790)
                      .....+.||||  +|+|++..++...+|.+...|+.         ...++.+. .....|++|++.+.+...    ..+.
T Consensus       204 ~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~---------~~~l~~~~~~~~~~~SpDG~~la~~~~----~~i~  268 (1045)
T 1k32_A          204 THVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKD---------LRKHTSFTDYYPRHLNTDGRRILFSKG----GSIY  268 (1045)
T ss_dssp             SCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCS---------CEECCCCCSSCEEEEEESSSCEEEEET----TEEE
T ss_pred             CcccceEEeCC--EEEEEEeccCceEEEEEeCCCCc---------ceEecCCCCcceeeEcCCCCEEEEEeC----CEEE
Confidence            34567889988  89999988888999999987764         22222221 223467778776655532    2344


Q ss_pred             EeeCCCCeeeEEEeecCCC-----Ccc---ccCCccccc-cCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCcc
Q psy463           87 RCSINEGTCDVVFSRDLDR-----GWF---EPFDHLRFS-SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIK  157 (790)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~s-pdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~  157 (790)
                      +++..+....   ....+.     .+.   .....++|| |||+.|++.+  .            .+|+++++.++.   
T Consensus       269 ~~d~~~~~l~---~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~------------~~i~~~~~~~~~---  328 (1045)
T 1k32_A          269 IFNPDTEKIE---KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--R------------GQAFIQDVSGTY---  328 (1045)
T ss_dssp             EECTTTCCEE---ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--T------------TEEEEECTTSSB---
T ss_pred             EecCCceEee---eeccCcccccccccccccccceeeecCCCCCEEEEEE--c------------CEEEEEcCCCCc---
Confidence            5555333222   111110     010   012457999 9999999977  1            289999987763   


Q ss_pred             CCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeE-EEecCCcccccCcCCccccccccceeehh
Q psy463          158 DKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLT-FIDLDDQAGIKDKVPVPLTRGRFTVTEIL  236 (790)
Q Consensus       158 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~lt~~~~~~~~~~  236 (790)
                         ..+++........-..|. +++ .++|.+.            ..+|| ++++++++      ..+++          
T Consensus       329 ---~~~~~~~~~~~~~~~~~s-dg~-~l~~~s~------------~~~l~~~~d~~~~~------~~~l~----------  375 (1045)
T 1k32_A          329 ---VLKVPEPLRIRYVRRGGD-TKV-AFIHGTR------------EGDFLGIYDYRTGK------AEKFE----------  375 (1045)
T ss_dssp             ---EEECSCCSCEEEEEECSS-SEE-EEEEEET------------TEEEEEEEETTTCC------EEECC----------
T ss_pred             ---eEEccCCCcceEEeeeEc-CCC-eEEEEEC------------CCceEEEEECCCCC------ceEec----------
Confidence               344555444223334666 443 3555543            16899 99998876      33443          


Q ss_pred             hcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          237 AWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       237 ~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                             ........++|||||+.+++.....   .|+++|+++|+.+.++....     .....++|||||++|++...
T Consensus       376 -------~~~~~~~~~~~SpDG~~la~~~~~~---~v~~~d~~tg~~~~~~~~~~-----~~v~~~~~SpDG~~la~~~~  440 (1045)
T 1k32_A          376 -------ENLGNVFAMGVDRNGKFAVVANDRF---EIMTVDLETGKPTVIERSRE-----AMITDFTISDNSRFIAYGFP  440 (1045)
T ss_dssp             -------CCCCSEEEEEECTTSSEEEEEETTS---EEEEEETTTCCEEEEEECSS-----SCCCCEEECTTSCEEEEEEE
T ss_pred             -------CCccceeeeEECCCCCEEEEECCCC---eEEEEECCCCceEEeccCCC-----CCccceEECCCCCeEEEEec
Confidence                   3345567899999999666654432   59999999999887774321     12457999999999986544


Q ss_pred             cccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCC-C------------ce
Q psy463          317 HNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS-P------------IV  383 (790)
Q Consensus       317 ~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~-~------------~~  383 (790)
                         +.++.........|+++|+++++      ...++.+...+.. +.|+|||+.|+|.+.++. +            ..
T Consensus       441 ---~~~~~~~~~~~~~i~l~d~~~g~------~~~l~~~~~~~~~-~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~  510 (1045)
T 1k32_A          441 ---LKHGETDGYVMQAIHVYDMEGRK------IFAATTENSHDYA-PAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV  510 (1045)
T ss_dssp             ---ECSSTTCSCCEEEEEEEETTTTE------EEECSCSSSBEEE-EEECTTSCEEEEEESCCCCCEECSSSSCEECCSC
T ss_pred             ---CccccccCCCCCeEEEEECCCCc------EEEeeCCCcccCC-ceEcCCCCEEEEEecccCCcCcchhccccccccC
Confidence               22000000014589999999887      7778876555544 889999999999887521 0            11


Q ss_pred             EEEEEEEcCCCCCCc--------------ceee---ecccccCCCcccEEEEEEecCCcEEEEE---------eec-CCC
Q psy463          384 QHMYRINIADPTATP--------------ECIT---CDLLTSANQKCSYSGATFSTNVSYYVLS---------CIG-PGI  436 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~--------------~~lt---~~~~~~~~~~~~~~~~~~s~dg~~~~~~---------~~~-~~~  436 (790)
                      ..+|.+.+......+              ..+.   ..+..+......+..+.+||||++++..         ... ..+
T Consensus       511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~  590 (1045)
T 1k32_A          511 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEK  590 (1045)
T ss_dssp             BEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCC
T ss_pred             ceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCC
Confidence            245555543210111              0000   0001111234567789999999876641         112 236


Q ss_pred             CeEEEEecCCCeEEEe
Q psy463          437 PEIMLFDKTGQRLLYW  452 (790)
Q Consensus       437 ~~i~~~~~~~~~~~~l  452 (790)
                      ..|+++|+.+++...+
T Consensus       591 ~~l~~~d~~~~~~~~l  606 (1045)
T 1k32_A          591 GVLLKYDVKTRKVTEV  606 (1045)
T ss_dssp             EEEEEEETTTCCEEEE
T ss_pred             ceEEEEECCCCcEEEe
Confidence            7899999988766554

>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*

Probab=99.73  E-value=2.7e-17  Score=165.55  Aligned_cols=199  Identities=14%  Similarity=0.023  Sum_probs=133.7

Q ss_pred             EEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhc-CCeEEEEEcCCC---CCCChhhhHhh--hhccC
Q psy463          486 KLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADN-KDIVVAYIDGRN---SALKGNTLKYA--GYRRL  559 (790)
Q Consensus       486 ~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~d~rG---~~~~g~~~~~~--~~~~~  559 (790)
                      +...|..    +++++|+||++||.+.+   ...|. .+...+... .++.+++|+.+.   ..+.|..|...  .....
T Consensus        55 y~~~p~~----~~~~~plVI~LHG~G~~---~~~~~-~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~  126 (285)
T 4fhz_A           55 FGRRGAA----PGEATSLVVFLHGYGAD---GADLL-GLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSS  126 (285)
T ss_dssp             EEEEESC----TTCCSEEEEEECCTTBC---HHHHH-TTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCC
T ss_pred             eecCCCC----CCCCCcEEEEEcCCCCC---HHHHH-HHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcc
Confidence            3445554    56788999999997654   22222 223333322 388899987431   11122221100  00000


Q ss_pred             C-------ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhh
Q psy463          560 G-------TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSER  632 (790)
Q Consensus       560 ~-------~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~  632 (790)
                      .       .....++.+.++.+.++.+ +|.+||+|+|+|+||.+++.++.++|. .++++++.++....          
T Consensus       127 ~~~~~~~~~~~~~~l~~~i~~~~~~~~-id~~ri~l~GfS~Gg~~a~~~a~~~p~-~~a~vv~~sG~l~~----------  194 (285)
T 4fhz_A          127 ETAAAEGMAAAARDLDAFLDERLAEEG-LPPEALALVGFSQGTMMALHVAPRRAE-EIAGIVGFSGRLLA----------  194 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHT-CCGGGEEEEEETHHHHHHHHHHHHSSS-CCSEEEEESCCCSC----------
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEEeCHHHHHHHHHHHhCcc-cCceEEEeecCccC----------
Confidence            0       0113445555666655344 899999999999999999999999885 88888888763110          


Q ss_pred             hcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh
Q psy463          633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK  712 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  712 (790)
                                +...                                                                  
T Consensus       195 ----------~~~~------------------------------------------------------------------  198 (285)
T 4fhz_A          195 ----------PERL------------------------------------------------------------------  198 (285)
T ss_dssp             ----------HHHH------------------------------------------------------------------
T ss_pred             ----------chhh------------------------------------------------------------------
Confidence                      0000                                                                  


Q ss_pred             hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          713 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       713 ~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                           ....+. ++|+|++||++|.+||++.++++++.|+++|.++++.+||+.+|.+.   .+.++.+.+||+++|
T Consensus       199 -----~~~~~~-~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~---~~~l~~~~~fL~~~L  266 (285)
T 4fhz_A          199 -----AEEARS-KPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA---PDGLSVALAFLKERL  266 (285)
T ss_dssp             -----HHHCCC-CCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---HHHHHHHHHHHHHHC
T ss_pred             -----hhhhhh-cCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---HHHHHHHHHHHHHHC
Confidence                 001122 78999999999999999999999999999999999999999999984   355688999999886

>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0

Probab=99.73  E-value=9.5e-17  Score=161.92  Aligned_cols=256  Identities=14%  Similarity=0.092  Sum_probs=148.1

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA  554 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~  554 (790)
                      +...||.++++....+        ...|+||++||.+.+   ...|..  ....++ .+|.|+++|.||+|.+...-   
T Consensus         9 ~~~~~g~~l~y~~~G~--------~~~p~lvl~hG~~~~---~~~w~~--~~~~L~-~~~~vi~~D~rG~G~S~~~~---   71 (266)
T 3om8_A            9 LATSDGASLAYRLDGA--------AEKPLLALSNSIGTT---LHMWDA--QLPALT-RHFRVLRYDARGHGASSVPP---   71 (266)
T ss_dssp             EECTTSCEEEEEEESC--------TTSCEEEEECCTTCC---GGGGGG--GHHHHH-TTCEEEEECCTTSTTSCCCC---
T ss_pred             EeccCCcEEEEEecCC--------CCCCEEEEeCCCccC---HHHHHH--HHHHhh-cCcEEEEEcCCCCCCCCCCC---
Confidence            4556899999887643        234789999998876   334442  223444 48999999999988764321   


Q ss_pred             hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc
Q psy463          555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM  634 (790)
Q Consensus       555 ~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~  634 (790)
                           +...++++.+.+..+++.++   .+++.++||||||.+++.++.++|+ +++.+|+.++....... ..+..+..
T Consensus        72 -----~~~~~~~~a~dl~~~l~~l~---~~~~~lvGhS~Gg~va~~~A~~~P~-rv~~lvl~~~~~~~~~~-~~~~~~~~  141 (266)
T 3om8_A           72 -----GPYTLARLGEDVLELLDALE---VRRAHFLGLSLGGIVGQWLALHAPQ-RIERLVLANTSAWLGPA-AQWDERIA  141 (266)
T ss_dssp             -----SCCCHHHHHHHHHHHHHHTT---CSCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCSBCCCS-HHHHHHHH
T ss_pred             -----CCCCHHHHHHHHHHHHHHhC---CCceEEEEEChHHHHHHHHHHhChH-hhheeeEecCcccCCch-hHHHHHHH
Confidence                 12345666666666665443   4689999999999999999999986 88988888764322110 00100000


Q ss_pred             CCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhh
Q psy463          635 GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIA  714 (790)
Q Consensus       635 g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  714 (790)
                      .... ..........    ..........+    ..+    ......+.+.+.......          +..........
T Consensus       142 ~~~~-~~~~~~~~~~----~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~  198 (266)
T 3om8_A          142 AVLQ-AEDMSETAAG----FLGNWFPPALL----ERA----EPVVERFRAMLMATNRHG----------LAGSFAAVRDT  198 (266)
T ss_dssp             HHHH-CSSSHHHHHH----HHHHHSCHHHH----HSC----CHHHHHHHHHHHTSCHHH----------HHHHHHHHHTC
T ss_pred             HHHc-cccHHHHHHH----HHHHhcChhhh----hcC----hHHHHHHHHHHHhCCHHH----------HHHHHHHhhcc
Confidence            0000 0000000000    00000000000    000    000111111111111000          00000001111


Q ss_pred             hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      .....+.++ ++|+|+++|++|..+|+..++.+.+.++..    ++++++ +||..+. .++++.+.+.+||.
T Consensus       199 d~~~~l~~i-~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~a----~~~~i~-~gH~~~~e~p~~~~~~i~~Fl~  265 (266)
T 3om8_A          199 DLRAQLARI-ERPTLVIAGAYDTVTAASHGELIAASIAGA----RLVTLP-AVHLSNVEFPQAFEGAVLSFLG  265 (266)
T ss_dssp             BCTTTGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHSTTC----EEEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred             chhhHhcCC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCC----EEEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence            222557788 999999999999999999999998887755    888898 7998887 88999999999985

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.73  E-value=7.8e-16  Score=162.06  Aligned_cols=251  Identities=17%  Similarity=0.201  Sum_probs=158.5

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      .|.|||||++|+|.+...+.  +      ..+||++++++++      ..+++....  ..-..|+|+++. ++|.+...
T Consensus        63 ~~~~SpDg~~la~~~~~~~~--~------~~~l~~~~~~~g~------~~~l~~~~~--~~~~~wspdg~~-l~~~~~~~  125 (347)
T 2gop_A           63 MPRISPDGKKIAFMRANEEK--K------VSEIWVADLETLS------SKKILEAKN--IRSLEWNEDSRK-LLIVGFKR  125 (347)
T ss_dssp             EEEECTTSSEEEEEEEETTT--T------EEEEEEEETTTTE------EEEEEEESE--EEEEEECTTSSE-EEEEEECC
T ss_pred             CeEECCCCCEEEEEEeccCC--C------cceEEEEECCCCc------eEEEEcCCC--ccceeECCCCCE-EEEEEccC
Confidence            46899999999998764311  1      3379999998874      556666654  445688887764 66665321


Q ss_pred             CC--------------CCCCCc-cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccC
Q psy463          193 ES--------------DGSTPV-DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANE  257 (790)
Q Consensus       193 ~~--------------~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD  257 (790)
                      ..              ++.++. ....+||++++++++.     ..+++                 . + ....+.||||
T Consensus       126 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~-----~~~l~-----------------~-~-~~~~~~~spd  181 (347)
T 2gop_A          126 REDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV-----IEEFE-----------------K-P-RFSSGIWHRD  181 (347)
T ss_dssp             CC---------CCCC---------CEEEEEEEETTTTEE-----EEEEE-----------------E-E-TTCEEEEETT
T ss_pred             CCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE-----Eeeec-----------------C-C-CcccccCCCC
Confidence            00              111111 1247899999998762     13444                 2 2 3457899999


Q ss_pred             CcEEEEEeccCc------ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC-CCCCcCcc
Q psy463          258 SVVAAWVNRVQN------RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD-GSTPVDSW  330 (790)
Q Consensus       258 g~~~~~~~r~~~------~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~-g~~~~~~~  330 (790)
                      | +++...+...      ...|+.++  +++.+.|+.. .   .   .  ..+||||+.|++...   +.. +.   ...
T Consensus       182 g-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~---~---~--~~~spdg~~l~~~~~---~~~~~~---~~~  243 (347)
T 2gop_A          182 K-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-V---S---F--YAVDSDGERILLYGK---PEKKYM---SEH  243 (347)
T ss_dssp             E-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-E---S---E--EEEEECSSCEEEEEC---CSSSCC---CSS
T ss_pred             e-EEEEEecccccccccccccEEEeC--CCceEEeccC-c---c---e--eeECCCCCEEEEEEc---cccCCc---ccc
Confidence            9 6666655432      45799999  7777777654 1   1   1  234999999997664   111 10   014


Q ss_pred             cEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccC
Q psy463          331 DHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSA  409 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~  409 (790)
                      .+|+++|  +++      .+.|+.+ ...+...+.|+ ||  ++|.+..+.  ..+|| ++ .   ++.++++.      
T Consensus       244 ~~l~~~d--~~~------~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~--~~~l~-~~-~---g~~~~~~~------  299 (347)
T 2gop_A          244 NKLYIYD--GKE------VMGILDEVDRGVGQAKIKD-GK--VYFTLFEEG--SVNLY-IW-D---GEIKPIAK------  299 (347)
T ss_dssp             CEEEEEC--SSC------EEESSTTCCSEEEEEEEET-TE--EEEEEEETT--EEEEE-EE-S---SSEEEEEC------
T ss_pred             ceEEEEC--CCc------eEeccccCCcccCCccEEc-Cc--EEEEEecCC--cEEEE-Ec-C---CceEEEec------
Confidence            5899999  555      6677655 34444347899 87  777765532  37899 88 3   35556654      


Q ss_pred             CCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecCCCeEEEec
Q psy463          410 NQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       410 ~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~  453 (790)
                       +...+..++|+|  . ++++....+ +++||.++   ++.+.|+
T Consensus       300 -~~~~v~~~~~s~--~-~~~~~~~~~~~~~l~~~~---g~~~~lt  337 (347)
T 2gop_A          300 -GRHWIMGFDVDE--I-VVYLKETATRLRELFTWD---GEEKQLT  337 (347)
T ss_dssp             -SSSEEEEEEESS--S-EEEEEECSSSCCEEEEES---SSEEECC
T ss_pred             -CCCeEEeeeeeC--c-EEEEEcCCCChHHheEeC---CcEEEec
Confidence             345677888999  3 556666666 66999998   3344444

>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}

Probab=99.73  E-value=3.3e-17  Score=165.83  Aligned_cols=234  Identities=15%  Similarity=0.200  Sum_probs=151.3

Q ss_pred             ccCCCCceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCC---eEEEE
Q psy463          463 TNITLPSVEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKD---IVVAY  538 (790)
Q Consensus       463 ~~~~~~~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G---~~v~~  538 (790)
                      ....++..+.+++.+. +|..+.+++++|.++.  +.+++|+|+++||++.... ...+. .+...+.++.|   ++|+.
T Consensus        11 ~~~~~~~~~~~~~~s~~~g~~~~~~v~~P~~~~--~~~~~Pvl~~lhG~~~~~~-~~~~~-~~~~~~~~~~g~~~~ivV~   86 (275)
T 2qm0_A           11 QQIITSNTEQWKMYSKLEGKEYQIHISKPKQPA--PDSGYPVIYVLDGNAFFQT-FHEAV-KIQSVRAEKTGVSPAIIVG   86 (275)
T ss_dssp             ECCCCTTEEEEEEECTTTCCEEEEEEECCSSCC--CTTCEEEEEEESHHHHHHH-HHHHH-HHHGGGHHHHCCCCCEEEE
T ss_pred             CceecCCceEEEEEecCCCCEEEEEEECCCCCC--CCCCccEEEEecChHHHHH-HHHHH-HHHhhcchhcCCCCeEEEE
Confidence            3456778888999886 6899999999999987  6678999999999864211 11111 12223333456   99999


Q ss_pred             EcCCCCCCChhhhHhhhhc------------------cCC-ccchhHHH--HHHHHHHHhCCCcCCCceEEEEechHHHH
Q psy463          539 IDGRNSALKGNTLKYAGYR------------------RLG-TVEIYDQI--NVTRYLQENLPYIDKTRTAIWGWSYGGYA  597 (790)
Q Consensus       539 ~d~rG~~~~g~~~~~~~~~------------------~~~-~~~~~D~~--~~~~~l~~~~~~~d~~ri~i~G~S~GG~~  597 (790)
                      +|+++...++...+...+.                  ..+ ...+.+.+  +.+.++.++++ +|..+++|+||||||++
T Consensus        87 i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~-~~~~~~~~~G~S~GG~~  165 (275)
T 2qm0_A           87 VGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFE-IDKGKQTLFGHXLGGLF  165 (275)
T ss_dssp             EECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSC-EEEEEEEEEEETHHHHH
T ss_pred             ECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhcc-CCCCCCEEEEecchhHH
Confidence            9998753322111111111                  011 01222222  23344555444 78889999999999999


Q ss_pred             HHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChh
Q psy463          598 TGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ  677 (790)
Q Consensus       598 a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~  677 (790)
                      ++.++.++|+ .|+++++.+|...|...      .++.                  ..+                     
T Consensus       166 a~~~~~~~p~-~f~~~~~~s~~~~~~~~------~~~~------------------~~~---------------------  199 (275)
T 2qm0_A          166 ALHILFTNLN-AFQNYFISSPSIWWNNK------SVLE------------------KEE---------------------  199 (275)
T ss_dssp             HHHHHHHCGG-GCSEEEEESCCTTHHHH------GGGG------------------GTT---------------------
T ss_pred             HHHHHHhCch-hhceeEEeCceeeeChH------HHHH------------------HHH---------------------
Confidence            9999998885 89999999997543210      0000                  000                     


Q ss_pred             hHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHH---Hhc
Q psy463          678 QSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSL---QHA  754 (790)
Q Consensus       678 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l---~~~  754 (790)
                         .+...                                ...... ..|++++||+.|..++..+++++++.|   +++
T Consensus       200 ---~~~~~--------------------------------~~~~~~-~~~~~l~~G~~D~~~~~~~~~~~~~~L~~~~~~  243 (275)
T 2qm0_A          200 ---NLIIE--------------------------------LNNAKF-ETGVFLTVGSLEREHMVVGANELSERLLQVNHD  243 (275)
T ss_dssp             ---HHHHH--------------------------------HHTCSS-CEEEEEEEETTSCHHHHHHHHHHHHHHHHCCCT
T ss_pred             ---HHHhh--------------------------------hcccCC-CceEEEEeCCcccchhhHHHHHHHHHHHhcccC
Confidence               00000                                001123 689999999999999999999999999   667


Q ss_pred             CCceEEEEcCCCCCcCCCcchHHHHHHHHHH
Q psy463          755 DIMFQSQTYPDEEHGLIGVRPHFYHTLERFL  785 (790)
Q Consensus       755 g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl  785 (790)
                      |+++++.++|+++|+..  ....+...+.||
T Consensus       244 g~~~~~~~~~g~~H~~~--~~~~l~~~l~~l  272 (275)
T 2qm0_A          244 KLKFKFYEAEGENHASV--VPTSLSKGLRFI  272 (275)
T ss_dssp             TEEEEEEEETTCCTTTH--HHHHHHHHHHHH
T ss_pred             CceEEEEECCCCCcccc--HHHHHHHHHHHH
Confidence            88999999999999653  233334445554

>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0

Probab=99.73  E-value=7.1e-17  Score=164.49  Aligned_cols=259  Identities=16%  Similarity=0.153  Sum_probs=140.2

Q ss_pred             cCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhh
Q psy463          477 IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGY  556 (790)
Q Consensus       477 ~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~  556 (790)
                      ..+|.++++...        + . .|.||++||++++   ...|... . ..++++||.|+++|+||+|.+....     
T Consensus        13 ~~~g~~l~y~~~--------G-~-g~~vvllHG~~~~---~~~w~~~-~-~~l~~~g~~vi~~D~~G~G~S~~~~-----   72 (281)
T 3fob_A           13 NQAPIEIYYEDH--------G-T-GKPVVLIHGWPLS---GRSWEYQ-V-PALVEAGYRVITYDRRGFGKSSQPW-----   72 (281)
T ss_dssp             TTEEEEEEEEEE--------S-S-SEEEEEECCTTCC---GGGGTTT-H-HHHHHTTEEEEEECCTTSTTSCCCS-----
T ss_pred             CCCceEEEEEEC--------C-C-CCeEEEECCCCCc---HHHHHHH-H-HHHHhCCCEEEEeCCCCCCCCCCCc-----
Confidence            446777776654        1 2 2567899999877   3344432 2 3344479999999999988654321     


Q ss_pred             ccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCC
Q psy463          557 RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGL  636 (790)
Q Consensus       557 ~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~  636 (790)
                         ....+++..+.+..+++.++   .+++.|+||||||.+++.++..+++++++.+++.++.............   +.
T Consensus        73 ---~~~~~~~~a~dl~~ll~~l~---~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~---~~  143 (281)
T 3fob_A           73 ---EGYEYDTFTSDLHQLLEQLE---LQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPE---GA  143 (281)
T ss_dssp             ---SCCSHHHHHHHHHHHHHHTT---CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTT---CS
T ss_pred             ---cccCHHHHHHHHHHHHHHcC---CCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccc---cc
Confidence               12345666666666666443   5789999999999988776666544588888887765321100000000   00


Q ss_pred             CCccCchhhhhhc---cccc----hhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          637 PTFEDNLEGYKIA---ALNN----KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       637 ~~~~~~~~~~~~~---~~~~----~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                      .. ......+...   ....    ....+...      +.....+.................. ..         .....
T Consensus       144 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~  206 (281)
T 3fob_A          144 LD-DATIETFKSGVINDRLAFLDEFTKGFFAA------GDRTDLVSESFRLYNWDIAAGASPK-GT---------LDCIT  206 (281)
T ss_dssp             BC-HHHHHHHHHHHHHHHHHHHHHHHHHHTCB------TTBCCSSCHHHHHHHHHHHHTSCHH-HH---------HHHHH
T ss_pred             cc-hhHHHHHHHHhhhhHHHHHHHHHHHhccc------ccccccchHHHHHHhhhhhcccChH-HH---------HHHHH
Confidence            00 0000000000   0000    00000000      0000011110000000000000000 00         00000


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhh-HHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQS-MMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~-~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      .+...+....+.++ ++|+|++||++|..+|++.+ +.+.+.++.    .+++++|++||.+.. +++++.+.+.+||+
T Consensus       207 ~~~~~d~~~~l~~i-~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~----~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~  280 (281)
T 3fob_A          207 AFSKTDFRKDLEKF-NIPTLIIHGDSDATVPFEYSGKLTHEAIPN----SKVALIKGGPHGLNATHAKEFNEALLLFLK  280 (281)
T ss_dssp             HHHHCCCHHHHTTC-CSCEEEEEETTCSSSCGGGTHHHHHHHSTT----CEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred             Hccccchhhhhhhc-CCCEEEEecCCCCCcCHHHHHHHHHHhCCC----ceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence            11111223567888 99999999999999999977 444455443    499999999999887 89999999999985

>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}

Probab=99.73  E-value=9.1e-17  Score=162.35  Aligned_cols=242  Identities=17%  Similarity=0.065  Sum_probs=139.7

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|+||++||.+++.   ..|..  ....++ .+|.|+++|+||+|.+....       .....++++.+.+..+++.++
T Consensus        14 ~~~~vvllHG~~~~~---~~w~~--~~~~L~-~~~~vi~~Dl~G~G~S~~~~-------~~~~~~~~~a~dl~~~l~~l~   80 (268)
T 3v48_A           14 DAPVVVLISGLGGSG---SYWLP--QLAVLE-QEYQVVCYDQRGTGNNPDTL-------AEDYSIAQMAAELHQALVAAG   80 (268)
T ss_dssp             TCCEEEEECCTTCCG---GGGHH--HHHHHH-TTSEEEECCCTTBTTBCCCC-------CTTCCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCccH---HHHHH--HHHHHh-hcCeEEEECCCCCCCCCCCc-------cccCCHHHHHHHHHHHHHHcC
Confidence            357899999998763   33432  223444 57999999999987653221       112456677777776666444


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc-cchh--hhcCCCCccCchhhhhhccccc-h-
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT-IYSE--RYMGLPTFEDNLEGYKIAALNN-K-  654 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~-~~~~--~~~g~~~~~~~~~~~~~~~~~~-~-  654 (790)
                         .+++.|+||||||.+++.++.++|+ +++.+++.++......... .+..  ..+.    ......+....... . 
T Consensus        81 ---~~~~~lvGhS~GG~ia~~~A~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  152 (268)
T 3v48_A           81 ---IEHYAVVGHALGALVGMQLALDYPA-SVTVLISVNGWLRINAHTRRCFQVRERLLY----SGGAQAWVEAQPLFLYP  152 (268)
T ss_dssp             ---CCSEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCCSBCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHSC
T ss_pred             ---CCCeEEEEecHHHHHHHHHHHhChh-hceEEEEeccccccchhhhHHHHHHHHHHh----ccchhhhhhhhhhhcCc
Confidence               4789999999999999999999986 8888888887543221000 0000  0000    00000000000000 0 


Q ss_pred             hhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecC
Q psy463          655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGT  734 (790)
Q Consensus       655 ~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~  734 (790)
                      ...+.            ...+ .........+......         ..................+.++ ++|+|+++|+
T Consensus       153 ~~~~~------------~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~d~~~~l~~i-~~P~Lii~G~  209 (268)
T 3v48_A          153 ADWMA------------ARAP-RLEAEDALALAHFQGK---------NNLLRRLNALKRADFSHHADRI-RCPVQIICAS  209 (268)
T ss_dssp             HHHHH------------TTHH-HHHHHHHHHHHTCCCH---------HHHHHHHHHHHHCBCTTTGGGC-CSCEEEEEET
T ss_pred             hhhhh------------cccc-cchhhHHHHHhhcCch---------hHHHHHHHHHhccchhhhhhcC-CCCeEEEEeC
Confidence            00000            0000 0000000000000000         0000000001111122557788 9999999999


Q ss_pred             CCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          735 MDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       735 ~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      +|..+|++.+..+.+.++..    +++++|++||..+. .++.+.+.|.+||.+.+
T Consensus       210 ~D~~~p~~~~~~l~~~~p~~----~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~~  261 (268)
T 3v48_A          210 DDLLVPTACSSELHAALPDS----QKMVMPYGGHACNVTDPETFNALLLNGLASLL  261 (268)
T ss_dssp             TCSSSCTHHHHHHHHHCSSE----EEEEESSCCTTHHHHCHHHHHHHHHHHHHHHH
T ss_pred             CCcccCHHHHHHHHHhCCcC----eEEEeCCCCcchhhcCHHHHHHHHHHHHHHhc
Confidence            99999999999998877654    88999999999887 89999999999998753

>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}

Probab=99.73  E-value=1.7e-16  Score=163.65  Aligned_cols=141  Identities=13%  Similarity=0.112  Sum_probs=94.8

Q ss_pred             EEEEE---cCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          472 YMSVP---IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       472 ~~~~~---~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      .+++.   ..+|..+.++++.|.+.    ..+.|+||++||+++..   ..|. ......++++||.|+++|+++....+
T Consensus        26 ~~~~~~~~~~~~~~l~~~~~~P~~~----~~~~p~vv~lHG~~~~~---~~~~-~~~~~~l~~~g~~v~~~d~~~~~~p~   97 (304)
T 3d0k_A           26 AIPYLDDDRNADRPFTLNTYRPYGY----TPDRPVVVVQHGVLRNG---ADYR-DFWIPAADRHKLLIVAPTFSDEIWPG   97 (304)
T ss_dssp             EEEECC---CTTCCEEEEEEECTTC----CTTSCEEEEECCTTCCH---HHHH-HHTHHHHHHHTCEEEEEECCTTTSCH
T ss_pred             eEEecccCCCCCceEEEEEEeCCCC----CCCCcEEEEeCCCCCCH---HHHH-HHHHHHHHHCCcEEEEeCCccccCCC
Confidence            45555   56788999999999863    24579999999998763   2331 12234455589999999999642110


Q ss_pred             hh-h--H----hh-hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeC-CC
Q psy463          549 NT-L--K----YA-GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVA-PV  619 (790)
Q Consensus       549 ~~-~--~----~~-~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~-~~  619 (790)
                      .. |  .    .. .........+.|+.++++++.+ ...+|.++|+|+||||||.+++.++.++|+..++++++.+ |.
T Consensus        98 ~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~  176 (304)
T 3d0k_A           98 VESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRA-AEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW  176 (304)
T ss_dssp             HHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHH-TTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred             ccccccCccccccCCCCcccchHHHHHHHHHHHHHh-ccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence            00 0  0    00 0001112345788889999988 4458889999999999999999999988854677766554 55


Q ss_pred             CC
Q psy463          620 TD  621 (790)
Q Consensus       620 ~~  621 (790)
                      ..
T Consensus       177 ~~  178 (304)
T 3d0k_A          177 YT  178 (304)
T ss_dssp             CC
T ss_pred             cc
Confidence            33

>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40

Probab=99.72  E-value=3.7e-16  Score=165.90  Aligned_cols=280  Identities=15%  Similarity=0.117  Sum_probs=155.7

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccc----------cccccchHH-HHHhcCCeEEEEEcCCC--CC
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVT----------ERFSVDWNL-YLADNKDIVVAYIDGRN--SA  545 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~----------~~~~~~~~~-~~~~~~G~~v~~~d~rG--~~  545 (790)
                      +|..+++..+.+.+     ..+.|+||++||.+++....          ..|...... ..+.+.||.|+++|+||  .|
T Consensus        29 ~g~~l~y~~~g~~~-----~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G  103 (366)
T 2pl5_A           29 SPVVIAYETYGTLS-----SSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKG  103 (366)
T ss_dssp             SSEEEEEEEEECCC-----TTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSS
T ss_pred             cCceeeEEeccCcC-----CCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccC
Confidence            45567776665542     22357899999998873210          023221100 01224799999999999  55


Q ss_pred             CChhhhHhhh-----hccCCccchhHHHHHHHHHHHhCCCcCCCce-EEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          546 LKGNTLKYAG-----YRRLGTVEIYDQINVTRYLQENLPYIDKTRT-AIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       546 ~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri-~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      .++.......     ........++++.+.+..+++..   +.+++ .|+||||||.+++.++.++|+ +++++|+.+|.
T Consensus       104 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~  179 (366)
T 2pl5_A          104 SSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL---GIEKLFCVAGGSMGGMQALEWSIAYPN-SLSNCIVMAST  179 (366)
T ss_dssp             SSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT---TCSSEEEEEEETHHHHHHHHHHHHSTT-SEEEEEEESCC
T ss_pred             CCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHc---CCceEEEEEEeCccHHHHHHHHHhCcH-hhhheeEeccC
Confidence            4432100000     00011245777777777777643   35788 899999999999999999986 89999999887


Q ss_pred             CCcccccccchh----hhcCCCCc-----cC--chhhhh---------hccccchhhhccCCcEE----------E---E
Q psy463          620 TDWIYYDTIYSE----RYMGLPTF-----ED--NLEGYK---------IAALNNKVDRIRDKQYL----------L---V  666 (790)
Q Consensus       620 ~~~~~~~~~~~~----~~~g~~~~-----~~--~~~~~~---------~~~~~~~~~~~~~~p~l----------~---~  666 (790)
                      .........+..    .+...+..     ..  ......         ..........+. ..+.          +   .
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  258 (366)
T 2pl5_A          180 AEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFG-RNPPRGNILSTDFAVGSYL  258 (366)
T ss_dssp             SBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHT-TSCCSSCTTTTTTTSCGGG
T ss_pred             ccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhh-hhhhcccccchhhhHHHHH
Confidence            654321100000    00000000     00  000000         000000000000 0000          0   0


Q ss_pred             eecCC---CccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhh
Q psy463          667 HGTMD---DNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQ  743 (790)
Q Consensus       667 ~g~~d---~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~  743 (790)
                      ....+   ..........+...+......                   ........+.++ ++|+|+++|++|..+|++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~  318 (366)
T 2pl5_A          259 IYQGESFVDRFDANSYIYVTKALDHYSLG-------------------KGKELTAALSNA-TCRFLVVSYSSDWLYPPAQ  318 (366)
T ss_dssp             GSTTCCSSSCCCHHHHHHHHHHHHHCBCC-------------------SHHHHHHHHTTC-CSEEEEEEETTCCSSCHHH
T ss_pred             HHHHHhhhcccChhHHHHHHhhhhhhccc-------------------cccchhhhhccC-CCCEEEEecCCCcccCHHH
Confidence            00000   001111111122222221110                   000122467788 9999999999999999999


Q ss_pred             hHHHHHHHHhcCCceEEEEc-CCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          744 SMMLAKSLQHADIMFQSQTY-PDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       744 ~~~l~~~l~~~g~~~~~~~~-p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ++.+.+.++.++..++++++ +++||.+.. .++++.+.|.+||+++
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~  365 (366)
T 2pl5_A          319 SREIVKSLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENP  365 (366)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCC
T ss_pred             HHHHHHHhhhcccCeEEEEeCCCCCcchhhcChhHHHHHHHHHHccC
Confidence            99999999977666799999 899999987 7889999999999864

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.72  E-value=2.1e-16  Score=169.63  Aligned_cols=260  Identities=15%  Similarity=0.159  Sum_probs=168.2

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+|||||++|+|.....+          ..+||++++++++      ..+++.+.........|+++++. ++|.+..
T Consensus        39 ~~~~~SpdG~~l~~~~~~~g----------~~~l~~~d~~~~~------~~~l~~~~~~~~~~~~~spdg~~-l~~~~~~  101 (396)
T 3c5m_A           39 YQKCFTQDGKKLLFAGDFDG----------NRNYYLLNLETQQ------AVQLTEGKGDNTFGGFISTDERA-FFYVKNE  101 (396)
T ss_dssp             TSCCBCTTSCEEEEEECTTS----------SCEEEEEETTTTE------EEECCCSSCBCTTTCEECTTSSE-EEEEETT
T ss_pred             ecCcCCCCCCEEEEEEecCC----------CceEEEEECCCCc------EEEeecCCCCccccceECCCCCE-EEEEEcC
Confidence            56899999999999876432          2389999998874      45666654332222467777764 6666542


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEE-------------------E
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSR-------------------V  252 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~  252 (790)
                                  ..||++++++++.      ..++..                .......                   +
T Consensus       102 ------------~~l~~~d~~~~~~------~~~~~~----------------~~~~~~~g~~l~~~~~~~~~~~~~~~~  147 (396)
T 3c5m_A          102 ------------LNLMKVDLETLEE------QVIYTV----------------DEEWKGYGTWVANSDCTKLVGIEILKR  147 (396)
T ss_dssp             ------------TEEEEEETTTCCE------EEEEEC----------------CTTEEEEEEEEECTTSSEEEEEEEEGG
T ss_pred             ------------CcEEEEECCCCCc------EEEEec----------------ccccCCCCCEEEeccCCcccccccccc
Confidence                        4799999998863      333310                0111111                   4


Q ss_pred             EEccCCcEEEEEe--ccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEcc-CCCEEEEEEccccccCCCCCcCc
Q psy463          253 NWANESVVAAWVN--RVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS-DGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       253 ~wspDg~~~~~~~--r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-Dg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      .|||||+.+++..  .......|+++++++++.+.++....   +   ...+.||| ||+.|+|...   .....    .
T Consensus       148 ~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~---~---~~~~~~sp~dg~~l~~~~~---~~~~~----~  214 (396)
T 3c5m_A          148 DWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTA---W---LGHPIYRPFDDSTVGFCHE---GPHDL----V  214 (396)
T ss_dssp             GCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESS---C---EEEEEEETTEEEEEEEEEC---SCSSS----C
T ss_pred             ccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCc---c---cccceECCCCCCEEEEEec---CCCCC----C
Confidence            5778877333322  12344579999999999888775421   1   34789999 8998886543   11110    0


Q ss_pred             ccEEEEEEcCCCCcccCCCcccccCC--CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccc
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLTRG--RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLT  407 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~  407 (790)
                      ..+|+++++++++      .+.|+..  ...+. .+.|+|||+.|+|.+.........|+++++.+  ++.++++..   
T Consensus       215 ~~~l~~~d~~~~~------~~~l~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~--g~~~~l~~~---  282 (396)
T 3c5m_A          215 DARMWLVNEDGSN------VRKIKEHAEGESCT-HEFWIPDGSAMAYVSYFKGQTDRVIYKANPET--LENEEVMVM---  282 (396)
T ss_dssp             SCCCEEEETTSCC------CEESSCCCTTEEEE-EEEECTTSSCEEEEEEETTTCCEEEEEECTTT--CCEEEEEEC---
T ss_pred             CceEEEEECCCCc------eeEeeccCCCcccc-ceEECCCCCEEEEEecCCCCccceEEEEECCC--CCeEEeeeC---
Confidence            2579999998876      6677653  22333 38999999999998776322225599999977  666666642   


Q ss_pred             cCCCcccEEEEEEec-CCcEEEEEeec-------------CCCCeEEEEecCCCeEEEec
Q psy463          408 SANQKCSYSGATFST-NVSYYVLSCIG-------------PGIPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~-dg~~~~~~~~~-------------~~~~~i~~~~~~~~~~~~l~  453 (790)
                         .  ... +.||| ||+++++....             .+...|+++++++++.+.++
T Consensus       283 ---~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~  336 (396)
T 3c5m_A          283 ---P--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC  336 (396)
T ss_dssp             ---C--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred             ---C--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence               1  123 88999 99988775422             12478999999876655544

>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A

Probab=99.72  E-value=2.3e-16  Score=158.08  Aligned_cols=243  Identities=17%  Similarity=0.161  Sum_probs=137.3

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....+         +.|.||++||.+++.  ...|.  .....++++||.|+++|+||+|.+....     ..
T Consensus        10 ~g~~l~~~~~g~---------~~~~vvllHG~~~~~--~~~~~--~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----~~   71 (254)
T 2ocg_A           10 NGVQLHYQQTGE---------GDHAVLLLPGMLGSG--ETDFG--PQLKNLNKKLFTVVAWDPRGYGHSRPPD-----RD   71 (254)
T ss_dssp             TTEEEEEEEEEC---------CSEEEEEECCTTCCH--HHHCH--HHHHHSCTTTEEEEEECCTTSTTCCSSC-----CC
T ss_pred             CCEEEEEEEecC---------CCCeEEEECCCCCCC--ccchH--HHHHHHhhCCCeEEEECCCCCCCCCCCC-----CC
Confidence            777887665521         235789999977651  11222  2234455578999999999987654221     11


Q ss_pred             CCccch-hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          559 LGTVEI-YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       559 ~~~~~~-~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                      +....+ .++.++++++.. .+   ..++.|+||||||.+++.++.++|+ +++++++.++........   ...+....
T Consensus        72 ~~~~~~~~~~~~~~~~l~~-l~---~~~~~l~GhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~---~~~~~~~~  143 (254)
T 2ocg_A           72 FPADFFERDAKDAVDLMKA-LK---FKKVSLLGWSDGGITALIAAAKYPS-YIHKMVIWGANAYVTDED---SMIYEGIR  143 (254)
T ss_dssp             CCTTHHHHHHHHHHHHHHH-TT---CSSEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCCSBCCHHH---HHHHHTTS
T ss_pred             CChHHHHHHHHHHHHHHHH-hC---CCCEEEEEECHhHHHHHHHHHHChH-HhhheeEeccccccChhh---HHHHHHHH
Confidence            111112 233444444444 33   4789999999999999999999986 889888887753221000   00000000


Q ss_pred             CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                          ....+... .........        +.   .........+.+.+...         ....         ......
T Consensus       144 ----~~~~~~~~-~~~~~~~~~--------~~---~~~~~~~~~~~~~~~~~---------~~~~---------~~~~~~  189 (254)
T 2ocg_A          144 ----DVSKWSER-TRKPLEALY--------GY---DYFARTCEKWVDGIRQF---------KHLP---------DGNICR  189 (254)
T ss_dssp             ----CGGGSCHH-HHHHHHHHH--------CH---HHHHHHHHHHHHHHHGG---------GGSG---------GGBSSG
T ss_pred             ----HHHHHHHH-hHHHHHHHh--------cc---hhhHHHHHHHHHHHHHH---------Hhcc---------CCchhh
Confidence                00000000 000000000        00   00000000011111000         0000         000112


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      ..+.++ ++|+|+++|++|..+|++.+..+.+.++.    .+++++|+++|.+.. .++.+.+.+.+||+
T Consensus       190 ~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~  254 (254)
T 2ocg_A          190 HLLPRV-QCPALIVHGEKDPLVPRFHADFIHKHVKG----SRLHLMPEGKHNLHLRFADEFNKLAEDFLQ  254 (254)
T ss_dssp             GGGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHSTT----CEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred             hhhhcc-cCCEEEEecCCCccCCHHHHHHHHHhCCC----CEEEEcCCCCCchhhhCHHHHHHHHHHHhC
Confidence            457788 99999999999999999998888877654    488999999999887 88899999999983

>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A

Probab=99.72  E-value=2.2e-16  Score=160.30  Aligned_cols=265  Identities=16%  Similarity=0.147  Sum_probs=141.3

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA  554 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~  554 (790)
                      +...+|.++++..+.|.        ..|.||++||.+++.   ..|..  ....++++||.|+++|+||+|.+....   
T Consensus         4 ~~~~~g~~l~y~~~g~~--------~~~~vvllHG~~~~~---~~w~~--~~~~L~~~g~~vi~~D~~G~G~S~~~~---   67 (276)
T 1zoi_A            4 VTTKDGVQIFYKDWGPR--------DAPVIHFHHGWPLSA---DDWDA--QLLFFLAHGYRVVAHDRRGHGRSSQVW---   67 (276)
T ss_dssp             EECTTSCEEEEEEESCT--------TSCEEEEECCTTCCG---GGGHH--HHHHHHHTTCEEEEECCTTSTTSCCCS---
T ss_pred             EECCCCcEEEEEecCCC--------CCCeEEEECCCCcch---hHHHH--HHHHHHhCCCEEEEecCCCCCCCCCCC---
Confidence            45568889988776442        126799999988762   33432  233455579999999999988764321   


Q ss_pred             hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc
Q psy463          555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM  634 (790)
Q Consensus       555 ~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~  634 (790)
                           ....++++.+.+..+++.+   +.+++.|+||||||.+++.++.++++++++++|+.++.............   
T Consensus        68 -----~~~~~~~~~~d~~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~---  136 (276)
T 1zoi_A           68 -----DGHDMDHYADDVAAVVAHL---GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPG---  136 (276)
T ss_dssp             -----SCCSHHHHHHHHHHHHHHH---TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTT---
T ss_pred             -----CCCCHHHHHHHHHHHHHHh---CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccc---
Confidence                 1134555555555555432   34689999999999999987777623488888888764321100000000   


Q ss_pred             CCCCccCchhhhhhc---cccchhhhccCCcEEEEeec--CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          635 GLPTFEDNLEGYKIA---ALNNKVDRIRDKQYLLVHGT--MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       635 g~~~~~~~~~~~~~~---~~~~~~~~~~~~p~l~~~g~--~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                      +.+  ......+...   ........+...+.   .+.  ....+.......+.......... ..         .....
T Consensus       137 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~  201 (276)
T 1zoi_A          137 GLP--KSVFDGFQAQVASNRAQFYRDVPAGPF---YGYNRPGVEASEGIIGNWWRQGMIGSAK-AH---------YDGIV  201 (276)
T ss_dssp             SBC--HHHHHHHHHHHHHCHHHHHHHHHHTTT---TTTTSTTCCCCHHHHHHHHHHHHHSCHH-HH---------HHHHH
T ss_pred             ccc--HHHHHHHHHHHHHhHHHHHHHhhhccc---cccccccccccHHHHHHHHhhhhhhhHH-HH---------HHHHH
Confidence            000  0000000000   00000000000000   000  00001111111111100000000 00         00000


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHH-HHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMM-LAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~-l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      .+........+.++ ++|+|+++|++|..+|+....+ +.+.++    ..+++++|++||.+.. +++++.+.+.+||+
T Consensus       202 ~~~~~~~~~~l~~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~  275 (276)
T 1zoi_A          202 AFSQTDFTEDLKGI-QQPVLVMHGDDDQIVPYENSGVLSAKLLP----NGALKTYKGYPHGMPTTHADVINADLLAFIR  275 (276)
T ss_dssp             HHHSCCCHHHHHHC-CSCEEEEEETTCSSSCSTTTHHHHHHHST----TEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred             Hhcccchhhhcccc-CCCEEEEEcCCCcccChHHHHHHHHhhCC----CceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence            01111122557788 9999999999999999885544 444333    3589999999999876 88899999999985

>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A

Probab=99.72  E-value=1.1e-16  Score=161.93  Aligned_cols=228  Identities=11%  Similarity=0.006  Sum_probs=142.2

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|+||++||.++..   ..|.  .....++++||.|+++|+||+|.+.........    ...++|+.++++++.. .  
T Consensus        40 ~~~vv~~HG~~~~~---~~~~--~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~----~~~~~d~~~~i~~l~~-~--  107 (270)
T 3rm3_A           40 PVGVLLVHGFTGTP---HSMR--PLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTF----HDWVASVEEGYGWLKQ-R--  107 (270)
T ss_dssp             SEEEEEECCTTCCG---GGTH--HHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCH----HHHHHHHHHHHHHHHT-T--
T ss_pred             CeEEEEECCCCCCh---hHHH--HHHHHHHHCCCEEEEeCCCCCCCCccccccCCH----HHHHHHHHHHHHHHHh-h--
Confidence            48999999988763   2332  233445557999999999998876543222111    1236677777777765 2  


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                        ..+++|+|||+||.+++.++.++|.  ++++++.+|..........+..    ..    ....+...    ....+..
T Consensus       108 --~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~~~~~----~~----~~~~~~~~----~~~~~~~  171 (270)
T 3rm3_A          108 --CQTIFVTGLSMGGTLTLYLAEHHPD--ICGIVPINAAVDIPAIAAGMTG----GG----ELPRYLDS----IGSDLKN  171 (270)
T ss_dssp             --CSEEEEEEETHHHHHHHHHHHHCTT--CCEEEEESCCSCCHHHHHHSCC-----------CCSEEEC----CCCCCSC
T ss_pred             --CCcEEEEEEcHhHHHHHHHHHhCCC--ccEEEEEcceecccccccchhc----ch----hHHHHHHH----hCccccc
Confidence              5799999999999999999999885  8999999987654321110000    00    00000000    0000000


Q ss_pred             CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccc
Q psy463          661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH  740 (790)
Q Consensus       661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~  740 (790)
                      ....   ...-...+......+...+.                           .....+.++ ++|+|+++|++|..+|
T Consensus       172 ~~~~---~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~-~~P~lii~G~~D~~~~  220 (270)
T 3rm3_A          172 PDVK---ELAYEKTPTASLLQLARLMA---------------------------QTKAKLDRI-VCPALIFVSDEDHVVP  220 (270)
T ss_dssp             TTCC---CCCCSEEEHHHHHHHHHHHH---------------------------HHHHTGGGC-CSCEEEEEETTCSSSC
T ss_pred             cchH---hhcccccChhHHHHHHHHHH---------------------------HHHhhhhhc-CCCEEEEECCCCcccC
Confidence            0000   00000011111111111111                           111456778 9999999999999999


Q ss_pred             hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-c-chHHHHHHHHHHHHhh
Q psy463          741 FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-V-RPHFYHTLERFLDSCF  789 (790)
Q Consensus       741 ~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~-~~~~~~~i~~fl~~~l  789 (790)
                      +..+..+++.++..  +++++++|+++|.+.. . .+++.+.+.+||+++.
T Consensus       221 ~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~  269 (270)
T 3rm3_A          221 PGNADIIFQGISST--EKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKHA  269 (270)
T ss_dssp             TTHHHHHHHHSCCS--SEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCCC--cceEEEeCCCCcccccCccHHHHHHHHHHHHHhcC
Confidence            99999999888653  5689999999999987 3 3889999999999874

>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12

Probab=99.72  E-value=5.2e-16  Score=157.49  Aligned_cols=267  Identities=16%  Similarity=0.130  Sum_probs=141.5

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA  554 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~  554 (790)
                      +...+|.++++..+.|.        ..|.||++||.+++.   ..|..  ....++++||.|+++|+||+|.+....   
T Consensus         3 ~~~~~g~~l~y~~~g~~--------~~~~vvllHG~~~~~---~~w~~--~~~~l~~~g~~vi~~D~~G~G~S~~~~---   66 (275)
T 1a88_A            3 VTTSDGTNIFYKDWGPR--------DGLPVVFHHGWPLSA---DDWDN--QMLFFLSHGYRVIAHDRRGHGRSDQPS---   66 (275)
T ss_dssp             EECTTSCEEEEEEESCT--------TSCEEEEECCTTCCG---GGGHH--HHHHHHHTTCEEEEECCTTSTTSCCCS---
T ss_pred             EEccCCCEEEEEEcCCC--------CCceEEEECCCCCch---hhHHH--HHHHHHHCCceEEEEcCCcCCCCCCCC---
Confidence            45568888988776442        226799999987762   33432  223455579999999999988754321   


Q ss_pred             hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc
Q psy463          555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM  634 (790)
Q Consensus       555 ~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~  634 (790)
                           ....++++.+.+..+++.+   +.+++.++||||||.+++.++.++.+++++++|+.++.............   
T Consensus        67 -----~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~---  135 (275)
T 1a88_A           67 -----TGHDMDTYAADVAALTEAL---DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPD---  135 (275)
T ss_dssp             -----SCCSHHHHHHHHHHHHHHH---TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTT---
T ss_pred             -----CCCCHHHHHHHHHHHHHHc---CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcc---
Confidence                 1134555555555555432   34689999999999999887776623489988888865322110000000   


Q ss_pred             CCCCccCchhhhhhc---cccchhhhccCCcEEEEeec--CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          635 GLPTFEDNLEGYKIA---ALNNKVDRIRDKQYLLVHGT--MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       635 g~~~~~~~~~~~~~~---~~~~~~~~~~~~p~l~~~g~--~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                      +.+  ......+...   ........+...+.   .+.  ....................... ..         .....
T Consensus       136 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~  200 (275)
T 1a88_A          136 GLP--LEVFDEFRAALAANRAQFYIDVPSGPF---YGFNREGATVSQGLIDHWWLQGMMGAAN-AH---------YECIA  200 (275)
T ss_dssp             SBC--HHHHHHHHHHHHHCHHHHHHHHHHTTT---TTTTSTTCCCCHHHHHHHHHHHHHSCHH-HH---------HHHHH
T ss_pred             cCC--HHHHHHHHHHHhhhHHHHHHhhhcccc---ccccCcccccCHHHHHHHHHHhhhcchH-hH---------HHHHh
Confidence            000  0000000000   00000000000000   000  00001111111111100000000 00         00000


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .+........+.++ ++|+|+++|++|..+|+....++...+.   ..+++++++++||.+.. +++++.+.|.+||++
T Consensus       201 ~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~  275 (275)
T 1a88_A          201 AFSETDFTDDLKRI-DVPVLVAHGTDDQVVPYADAAPKSAELL---ANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS  275 (275)
T ss_dssp             HHHHCCCHHHHHHC-CSCEEEEEETTCSSSCSTTTHHHHHHHS---TTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred             hhhhcccccccccC-CCCEEEEecCCCccCCcHHHHHHHHhhC---CCcEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence            01111122456788 9999999999999999885554433322   24699999999999877 889999999999863

>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0

Probab=99.72  E-value=1.7e-16  Score=153.77  Aligned_cols=182  Identities=14%  Similarity=0.013  Sum_probs=126.5

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCC-------------CCCCChhhhHhhhhccCCccch
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGR-------------NSALKGNTLKYAGYRRLGTVEI  564 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~r-------------G~~~~g~~~~~~~~~~~~~~~~  564 (790)
                      ..+.| ||++||.++..   ..|. .+. ..++ .++.|+++|.+             |.+..+....   ........+
T Consensus        14 ~~~~p-vv~lHG~g~~~---~~~~-~~~-~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~---~~~~~~~~~   83 (209)
T 3og9_A           14 KDLAP-LLLLHSTGGDE---HQLV-EIA-EMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENF---DLESLDEET   83 (209)
T ss_dssp             TTSCC-EEEECCTTCCT---TTTH-HHH-HHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGB---CHHHHHHHH
T ss_pred             CCCCC-EEEEeCCCCCH---HHHH-HHH-HhcC-CCceEEEecCCcCCCCcccceecccccccccCCC---CHHHHHHHH
Confidence            34578 99999987763   2232 222 3344 68999999954             3221111000   000001234


Q ss_pred             hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchh
Q psy463          565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLE  644 (790)
Q Consensus       565 ~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  644 (790)
                      .++.+.++.+.+..+ +|.++++|+||||||.+++.++.++|. .++++++.+|......                    
T Consensus        84 ~~~~~~~~~~~~~~~-~d~~~~~l~G~S~Gg~~a~~~a~~~~~-~~~~~v~~~~~~~~~~--------------------  141 (209)
T 3og9_A           84 DWLTDEVSLLAEKHD-LDVHKMIAIGYSNGANVALNMFLRGKI-NFDKIIAFHGMQLEDF--------------------  141 (209)
T ss_dssp             HHHHHHHHHHHHHHT-CCGGGCEEEEETHHHHHHHHHHHTTSC-CCSEEEEESCCCCCCC--------------------
T ss_pred             HHHHHHHHHHHHhcC-CCcceEEEEEECHHHHHHHHHHHhCCc-ccceEEEECCCCCCcc--------------------
Confidence            555566666655333 788999999999999999999998885 7899998887532110                    


Q ss_pred             hhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccC
Q psy463          645 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIR  724 (790)
Q Consensus       645 ~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  724 (790)
                                                                     .                         ...... 
T Consensus       142 -----------------------------------------------~-------------------------~~~~~~-  148 (209)
T 3og9_A          142 -----------------------------------------------E-------------------------QTVQLD-  148 (209)
T ss_dssp             -----------------------------------------------C-------------------------CCCCCT-
T ss_pred             -----------------------------------------------c-------------------------cccccc-
Confidence                                                           0                         001123 


Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC  788 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~  788 (790)
                      .+|+|++||++|..+|+++++++++.|++.+.++++.+++ .+|.+.   .+..+.+.+||+++
T Consensus       149 ~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~---~~~~~~~~~~l~~~  208 (209)
T 3og9_A          149 DKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLT---QEEVLAAKKWLTET  208 (209)
T ss_dssp             TCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCC---HHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCC---HHHHHHHHHHHHhh
Confidence            7899999999999999999999999999999999999998 699884   35678889999864

>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*

Probab=99.72  E-value=9.1e-17  Score=176.54  Aligned_cols=263  Identities=14%  Similarity=0.098  Sum_probs=166.4

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccc-----ccc-------cc---h---HHHHHh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE-----RFS-------VD---W---NLYLAD  530 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~-----~~~-------~~---~---~~~~~~  530 (790)
                      ..+.+.++..||.+|.+.+++|.+     .+++|+||+.||.+.......     .|.       ..   |   ....++
T Consensus        40 ~~~~v~i~~~DG~~L~a~l~~P~~-----~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la  114 (560)
T 3iii_A           40 MEKDGTVEMRDGEKLYINIFRPNK-----DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWV  114 (560)
T ss_dssp             EEEEEEEECTTSCEEEEEEEECSS-----SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHG
T ss_pred             EEEEEEEECCCCcEEEEEEEecCC-----CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHH
Confidence            346688999999999999999974     467999999998766521000     010       00   1   134556


Q ss_pred             cCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCce
Q psy463          531 NKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVF  610 (790)
Q Consensus       531 ~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~  610 (790)
                      ++||+|+.+|+||+++++..+.     .++....+|+.++++|+.+ .++.| .||+++|+||||++++.+|...|+ .+
T Consensus       115 ~~Gy~vv~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~-~~~~~-~~igl~G~S~GG~~al~~a~~~p~-~l  186 (560)
T 3iii_A          115 PNDYVVVKVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAAN-QSWSN-GNIGTNGVSYLAVTQWWVASLNPP-HL  186 (560)
T ss_dssp             GGTCEEEEEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHT-STTEE-EEEEEEEETHHHHHHHHHHTTCCT-TE
T ss_pred             hCCCEEEEEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHh-CCCCC-CcEEEEccCHHHHHHHHHHhcCCC-ce
Confidence            6999999999999988776543     2344678999999999988 67777 799999999999999999998775 89


Q ss_pred             EEEEEeCCCCCcccccccchhhhcCCCCccCch-hhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhc
Q psy463          611 KCGISVAPVTDWIYYDTIYSERYMGLPTFEDNL-EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA  689 (790)
Q Consensus       611 ~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~  689 (790)
                      +|+++.+|+.++.... .+..   |.+  .... ..+...    .......          ....     ..+.+.+...
T Consensus       187 ~aiv~~~~~~d~~~~~-~~~g---G~~--~~~~~~~w~~~----~~~~~~~----------~~~~-----~~~~~~~~~h  241 (560)
T 3iii_A          187 KAMIPWEGLNDMYREV-AFHG---GIP--DTGFYRFWTQG----IFARWTD----------NPNI-----EDLIQAQQEH  241 (560)
T ss_dssp             EEEEEESCCCBHHHHT-TEET---TEE--CCSHHHHHHHH----HHHHTTT----------CTTB-----CCHHHHHHHC
T ss_pred             EEEEecCCcccccccc-eecC---CCC--chhHHHHHHhh----hcccccc----------ccch-----HHHHHHHHHC
Confidence            9999999998864211 1111   111  0000 001000    0000000          0000     0011111111


Q ss_pred             CcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCc
Q psy463          690 DIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHG  769 (790)
Q Consensus       690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~  769 (790)
                      .               ....+|+..++  .+++| ++|+|+++|..|..+....+.+.++++...+   ++.++.+.+|+
T Consensus       242 p---------------~~d~~W~~~~~--~~~~I-~vPvl~v~Gw~D~~~~~~g~l~~y~~l~~~~---k~l~ih~~~~~  300 (560)
T 3iii_A          242 P---------------LFDDFWKQRQV--PLSQI-KTPLLTCASWSTQGLHNRGSFEGFKQAASEE---KWLYVHGRKEW  300 (560)
T ss_dssp             C---------------SSCHHHHTTBC--CGGGC-CSCEEEEEEGGGTTTTHHHHHHHHHHCCCSS---EEEEEESSCHH
T ss_pred             C---------------CcchHhhccCC--chhhC-CCCEEEeCCcCCCcccchhHHHHHHhccccC---cEEEECCCCCc
Confidence            1               11235555555  57899 9999999999998666677777787776443   33333222333


Q ss_pred             CCCcchHHHHHHHHHHHHhhC
Q psy463          770 LIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       770 ~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      .........+.+++||+++||
T Consensus       301 ~~~~~~~~~~~~~~wfD~~Lk  321 (560)
T 3iii_A          301 ESYYARENLERQKSFFDFYLK  321 (560)
T ss_dssp             HHHHSHHHHHHHHHHHHHHTS
T ss_pred             CcccChhHHHHHHHHHHHHhC
Confidence            211234566889999999986

>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12

Probab=99.72  E-value=5.3e-16  Score=157.22  Aligned_cols=263  Identities=14%  Similarity=0.169  Sum_probs=140.2

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA  554 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~  554 (790)
                      ++..+|.++++..+.          ..|.||++||.+++   ...|..  ....++++||.|+++|+||+|.+....   
T Consensus         3 ~~~~~g~~l~y~~~g----------~~~~vvllHG~~~~---~~~~~~--~~~~L~~~g~~vi~~D~~G~G~S~~~~---   64 (273)
T 1a8s_A            3 FTTRDGTQIYYKDWG----------SGQPIVFSHGWPLN---ADSWES--QMIFLAAQGYRVIAHDRRGHGRSSQPW---   64 (273)
T ss_dssp             EECTTSCEEEEEEES----------CSSEEEEECCTTCC---GGGGHH--HHHHHHHTTCEEEEECCTTSTTSCCCS---
T ss_pred             EecCCCcEEEEEEcC----------CCCEEEEECCCCCc---HHHHhh--HHhhHhhCCcEEEEECCCCCCCCCCCC---
Confidence            456688888766541          12679999998876   233432  223455579999999999988654321   


Q ss_pred             hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc
Q psy463          555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM  634 (790)
Q Consensus       555 ~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~  634 (790)
                           ....+++..+.+..+++.+   +.+++.|+||||||.+++.++.++.+++++++++.++.............   
T Consensus        65 -----~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~---  133 (273)
T 1a8s_A           65 -----SGNDMDTYADDLAQLIEHL---DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPG---  133 (273)
T ss_dssp             -----SCCSHHHHHHHHHHHHHHT---TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTT---
T ss_pred             -----CCCCHHHHHHHHHHHHHHh---CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccc---
Confidence                 1134555555555555533   35789999999999999887766623488988888764321100000000   


Q ss_pred             CCCCccCchhhhhhc---cccchhhhccCCcEEEEeecC--CCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          635 GLPTFEDNLEGYKIA---ALNNKVDRIRDKQYLLVHGTM--DDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       635 g~~~~~~~~~~~~~~---~~~~~~~~~~~~p~l~~~g~~--d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                      +.+  ......+...   ........+...+.   .+..  ...................... .         ......
T Consensus       134 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~  198 (273)
T 1a8s_A          134 GLP--MEVFDGIRQASLADRSQLYKDLASGPF---FGFNQPGAKSSAGMVDWFWLQGMAAGHK-N---------AYDCIK  198 (273)
T ss_dssp             SBC--HHHHHHHHHHHHHHHHHHHHHHHHTTS---SSTTSTTCCCCHHHHHHHHHHHHHSCHH-H---------HHHHHH
T ss_pred             cCc--HHHHHHHHHHhHhhHHHHHHHhhcccc---cCcCCcccccCHHHHHHHHHhccccchh-H---------HHHHHH
Confidence            000  0000000000   00000000000000   0000  0001111111111100000000 0         000000


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHH-HHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLA-KSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~-~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      .+........+.++ ++|+|+++|++|..+|+....+.. +.++    .++++++|++||.+.. .++++.+.|.+||+
T Consensus       199 ~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~  272 (273)
T 1a8s_A          199 AFSETDFTEDLKKI-DVPTLVVHGDADQVVPIEASGIASAALVK----GSTLKIYSGAPHGLTDTHKDQLNADLLAFIK  272 (273)
T ss_dssp             HHHHCCCHHHHHTC-CSCEEEEEETTCSSSCSTTTHHHHHHHST----TCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred             HHhccChhhhhhcC-CCCEEEEECCCCccCChHHHHHHHHHhCC----CcEEEEeCCCCCcchhhCHHHHHHHHHHHHh
Confidence            01111222457788 999999999999999988554443 3333    3589999999999876 88899999999996

>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*

Probab=99.71  E-value=3.5e-16  Score=152.56  Aligned_cols=191  Identities=13%  Similarity=0.050  Sum_probs=129.6

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhc--CCeEEEEEcCCCC------CCChhhhH-hhhhc---cCCccc--
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADN--KDIVVAYIDGRNS------ALKGNTLK-YAGYR---RLGTVE--  563 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~d~rG~------~~~g~~~~-~~~~~---~~~~~~--  563 (790)
                      .++.|+||++||.++..   ..|.  .....+++  .||.|+++|.+|.      +..+..|. ....+   ......  
T Consensus        11 ~~~~~~vv~~HG~~~~~---~~~~--~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~   85 (218)
T 1auo_A           11 KPADACVIWLHGLGADR---YDFM--PVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELE   85 (218)
T ss_dssp             SCCSEEEEEECCTTCCT---TTTH--HHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHH
T ss_pred             CCCCcEEEEEecCCCCh---hhHH--HHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHH
Confidence            45679999999988763   2332  23344555  7999999987641      10000000 00000   000112  


Q ss_pred             --hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh-cCCCCceEEEEEeCCCCCcccccccchhhhcCCCCcc
Q psy463          564 --IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA-LDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFE  640 (790)
Q Consensus       564 --~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~-~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~  640 (790)
                        .+++...++.+.+ .+ ++.++++++|||+||.+++.++. ++|. .++++++.+|.....        .+   +   
T Consensus        86 ~~~~~~~~~~~~~~~-~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~~v~~~~~~~~~--------~~---~---  148 (218)
T 1auo_A           86 VSAKMVTDLIEAQKR-TG-IDASRIFLAGFSQGGAVVFHTAFINWQG-PLGGVIALSTYAPTF--------GD---E---  148 (218)
T ss_dssp             HHHHHHHHHHHHHHH-TT-CCGGGEEEEEETHHHHHHHHHHHTTCCS-CCCEEEEESCCCTTC--------CT---T---
T ss_pred             HHHHHHHHHHHHHHH-cC-CCcccEEEEEECHHHHHHHHHHHhcCCC-CccEEEEECCCCCCc--------hh---h---
Confidence              3344444444443 23 67789999999999999999999 8875 899999998864320        00   0   


Q ss_pred             CchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhh
Q psy463          641 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKV  720 (790)
Q Consensus       641 ~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  720 (790)
                                                                       . .                         ...
T Consensus       149 -------------------------------------------------~-~-------------------------~~~  153 (218)
T 1auo_A          149 -------------------------------------------------L-E-------------------------LSA  153 (218)
T ss_dssp             -------------------------------------------------C-C-------------------------CCH
T ss_pred             -------------------------------------------------h-h-------------------------hhh
Confidence                                                             0 0                         011


Q ss_pred             hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          721 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       721 ~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      .++ ++|+|+++|++|..+|++.++.+++.+++.+.++++++++ ++|.+..   +..+.+.+||.++|+
T Consensus       154 ~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~---~~~~~~~~~l~~~l~  218 (218)
T 1auo_A          154 SQQ-RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLP---QEIHDIGAWLAARLG  218 (218)
T ss_dssp             HHH-TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCH---HHHHHHHHHHHHHHC
T ss_pred             ccc-CCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCH---HHHHHHHHHHHHHhC
Confidence            345 8999999999999999999999999999988889999999 9998853   456788999988874

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.71  E-value=3e-16  Score=182.94  Aligned_cols=325  Identities=10%  Similarity=0.123  Sum_probs=188.3

Q ss_pred             ccccCCCcceeEeeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcC
Q psy463           62 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  141 (790)
Q Consensus        62 ~~~~w~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~  141 (790)
                      ..+.|++|+..+ ....   .-.+.+++..++++..+........  .....++|||||++|+|.+.....    ++...
T Consensus        20 ~~~~~spdg~~~-~~~~---dg~i~~~d~~~g~~~~~~~~~~~~~--~~v~~~~~SpDg~~l~~~~~~~~~----~~~~~   89 (723)
T 1xfd_A           20 PEAKWISDTEFI-YREQ---KGTVRLWNVETNTSTVLIEGKKIES--LRAIRYEISPDREYALFSYNVEPI----YQHSY   89 (723)
T ss_dssp             CCCCBSSSSCBC-CCCS---SSCEEEBCGGGCCCEEEECTTTTTT--TTCSEEEECTTSSEEEEEESCCCC----SSSCC
T ss_pred             cccEEcCCCcEE-EEeC---CCCEEEEECCCCcEEEEeccccccc--cccceEEECCCCCEEEEEecCccc----eeecc
Confidence            456899888743 2222   1267788888888776654322110  012468999999999998753322    11122


Q ss_pred             CcEEEEEEcCCcCCccCCcceeccccceE--EEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccC
Q psy463          142 WDHLTFIDLDDQAGIKDKVPVPLTRGRFT--VTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD  219 (790)
Q Consensus       142 ~~~l~~~~~~~~~~~~~~~~~~lt~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  219 (790)
                      ...||++++++++      ..+++.....  ...-..|+|+++. ++|.+.             ..||++++++++    
T Consensus        90 ~~~i~~~d~~~~~------~~~l~~~~~~~~~~~~~~~SPdG~~-la~~~~-------------~~i~~~~~~~g~----  145 (723)
T 1xfd_A           90 TGYYVLSKIPHGD------PQSLDPPEVSNAKLQYAGWGPKGQQ-LIFIFE-------------NNIYYCAHVGKQ----  145 (723)
T ss_dssp             CSEEEEEESSSCC------CEECCCTTCCSCCCSBCCBCSSTTC-EEEEET-------------TEEEEESSSSSC----
T ss_pred             eeeEEEEECCCCc------eEeccCCccccccccccEECCCCCE-EEEEEC-------------CeEEEEECCCCc----
Confidence            4689999998874      2444433211  1223578887765 777654             589999999887    


Q ss_pred             cCCccccccc-cce--eehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccC----------------------------
Q psy463          220 KVPVPLTRGR-FTV--TEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQ----------------------------  268 (790)
Q Consensus       220 ~~~~~lt~~~-~~~--~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~----------------------------  268 (790)
                        ..+++.+. ..+  .+...|.-.. ........+.|||||+.+++...+.                            
T Consensus       146 --~~~~~~~~~~~~~~~g~~~~v~~e-e~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  222 (723)
T 1xfd_A          146 --AIRVVSTGKEGVIYNGLSDWLYEE-EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG  222 (723)
T ss_dssp             --CEEEECCCBTTTEEEEECCHHHHH-TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred             --eEEEecCCCCCceECcccceeEEE-EeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence              44444110 000  0000000000 0001226799999999555543221                            


Q ss_pred             ---cceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcc
Q psy463          269 ---NRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI  344 (790)
Q Consensus       269 ---~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~  344 (790)
                         ....|+++|+.++++ +.+...............+.|||||+.|++...   ....      ...|+++|+++++  
T Consensus       223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~---~~~~------~~~i~~~d~~~g~--  291 (723)
T 1xfd_A          223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLN---RAQN------VSILTLCDATTGV--  291 (723)
T ss_dssp             SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEE---TTSC------EEEEEEEETTTCC--
T ss_pred             CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEc---CCCC------eEEEEEEeCCCCc--
Confidence               123799999998875 333321000000011346899999997764443   1122      5689999998887  


Q ss_pred             cCCCcccccCC--CeEEe---EEEeeecCCCEEEEE-EcC-C-CCceEEEEEEE-cCCCCCC---cceeeecccccCCCc
Q psy463          345 KDKVPVPLTRG--RFTVT---EILAWDEKENNVYFL-STQ-G-SPIVQHMYRIN-IADPTAT---PECITCDLLTSANQK  412 (790)
Q Consensus       345 ~~~~~~~lt~~--~~~~~---~~~~~s~dg~~l~~~-~~~-~-~~~~~~l~~~~-~~~~~~~---~~~lt~~~~~~~~~~  412 (790)
                          ...+...  ...+.   ..+.|+|||+.|+|. +.. + .....+||.++ ..+  ++   .+.|+.       +.
T Consensus       292 ----~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~l~~-------~~  358 (723)
T 1xfd_A          292 ----CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPN--SSNDNIQSITS-------GD  358 (723)
T ss_dssp             ----EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCC--SSSCCCCBSCC-------SS
T ss_pred             ----ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCC--CCccceeEeec-------CC
Confidence                5444321  11111   137899999999997 433 2 11246899999 455  45   566664       23


Q ss_pred             ccEEE-EEEecCCcEEEEEeecC--CCCeEEEEecCCC
Q psy463          413 CSYSG-ATFSTNVSYYVLSCIGP--GIPEIMLFDKTGQ  447 (790)
Q Consensus       413 ~~~~~-~~~s~dg~~~~~~~~~~--~~~~i~~~~~~~~  447 (790)
                      ..+.. +.|||||++|++.....  +...||.+++.++
T Consensus       359 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~  396 (723)
T 1xfd_A          359 WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN  396 (723)
T ss_dssp             SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred             eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence            33443 68999999999887654  3456777776654

>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*

Probab=99.71  E-value=8.3e-16  Score=158.02  Aligned_cols=269  Identities=12%  Similarity=0.065  Sum_probs=145.9

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++..+.+.        ..|.||++||.+++   ...|...+. ..++++||.|+++|+||+|.+...-.     .
T Consensus         9 ~g~~l~y~~~G~~--------~~~~vvllHG~~~~---~~~w~~~~~-~~L~~~G~~vi~~D~rG~G~S~~~~~-----~   71 (298)
T 1q0r_A            9 GDVELWSDDFGDP--------ADPALLLVMGGNLS---ALGWPDEFA-RRLADGGLHVIRYDHRDTGRSTTRDF-----A   71 (298)
T ss_dssp             TTEEEEEEEESCT--------TSCEEEEECCTTCC---GGGSCHHHH-HHHHTTTCEEEEECCTTSTTSCCCCT-----T
T ss_pred             CCeEEEEEeccCC--------CCCeEEEEcCCCCC---ccchHHHHH-HHHHhCCCEEEeeCCCCCCCCCCCCC-----C
Confidence            7888888776432        23679999999876   334443222 34455799999999999887653100     0


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC-Ccccc---ccc-chhhh
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT-DWIYY---DTI-YSERY  633 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~-~~~~~---~~~-~~~~~  633 (790)
                      .....++++.+.+..+++.+   +..++.|+||||||.+++.++.++|+ +++++|+.++.. .....   ... ....+
T Consensus        72 ~~~~~~~~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~  147 (298)
T 1q0r_A           72 AHPYGFGELAADAVAVLDGW---GVDRAHVVGLSMGATITQVIALDHHD-RLSSLTMLLGGGLDIDFDANIERVMRGEPT  147 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCCTTCCHHHHHHHHHHTCCC
T ss_pred             cCCcCHHHHHHHHHHHHHHh---CCCceEEEEeCcHHHHHHHHHHhCch-hhheeEEecccCCCcccccchhhhhhhhhh
Confidence            01234666666666666533   35789999999999999999999986 899988887654 21000   000 00000


Q ss_pred             c-CCCCccCchhhhhhc--------cccchhhhccCCcEEEEeecCCCccChhhHHHHHHH-HHhc-CcchhcccccCCC
Q psy463          634 M-GLPTFEDNLEGYKIA--------ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKS-LQHA-DIMFQSQRYMGLP  702 (790)
Q Consensus       634 ~-g~~~~~~~~~~~~~~--------~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~-l~~~-~~~~~~~~~~~~~  702 (790)
                      . ..+  ......+...        ..........  ......+................. +... ...    .+   .
T Consensus       148 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~  216 (298)
T 1q0r_A          148 LDGLP--GPQQPFLDALALMNQPAEGRAAEVAKRV--SKWRILSGTGVPFDDAEYARWEERAIDHAGGVL----AE---P  216 (298)
T ss_dssp             SSCSC--CCCHHHHHHHHHHHSCCCSHHHHHHHHH--HHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCC----SC---C
T ss_pred             hcccc--cccHHHHHHHhccCcccccHHHHHHHHH--HhhhhccCCCCCCCHHHHHHHHHHHhhccCCcc----ch---h
Confidence            0 000  0000000000        0000000000  000000000000111111111111 1111 000    00   0


Q ss_pred             CcCCcchhhhhhhhhhh-hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHH
Q psy463          703 TFEDNLEGYKIAALNNK-VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTL  781 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~-~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i  781 (790)
                        ............... +.++ ++|+|+++|++|..+|+..++.+.+.++.    .+++++|++||   ..++++.+.+
T Consensus       217 --~~~~~~~~~~~~~~~~l~~i-~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~----~~~~~i~~~gH---e~p~~~~~~i  286 (298)
T 1q0r_A          217 --YAHYSLTLPPPSRAAELREV-TVPTLVIQAEHDPIAPAPHGKHLAGLIPT----ARLAEIPGMGH---ALPSSVHGPL  286 (298)
T ss_dssp             --CGGGGCCCCCGGGGGGGGGC-CSCEEEEEETTCSSSCTTHHHHHHHTSTT----EEEEEETTCCS---SCCGGGHHHH
T ss_pred             --hhhhhhhcCccccccccccc-CCCEEEEEeCCCccCCHHHHHHHHHhCCC----CEEEEcCCCCC---CCcHHHHHHH
Confidence              000000001122245 7788 99999999999999999998888776654    48999999999   2467899999


Q ss_pred             HHHHHHhh
Q psy463          782 ERFLDSCF  789 (790)
Q Consensus       782 ~~fl~~~l  789 (790)
                      .+||.+++
T Consensus       287 ~~fl~~~~  294 (298)
T 1q0r_A          287 AEVILAHT  294 (298)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998764

>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}

Probab=99.71  E-value=7.5e-17  Score=151.44  Aligned_cols=174  Identities=14%  Similarity=0.002  Sum_probs=124.3

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ++.|+||++||.+++.   ..|........++++||.|+.+|+||.+.+....       ......+++.+.++++.+..
T Consensus         2 ~~~~~vv~~HG~~~~~---~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-------~~~~~~~~~~~~~~~~~~~~   71 (176)
T 2qjw_A            2 MSRGHCILAHGFESGP---DALKVTALAEVAERLGWTHERPDFTDLDARRDLG-------QLGDVRGRLQRLLEIARAAT   71 (176)
T ss_dssp             CSSCEEEEECCTTCCT---TSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGC-------TTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEEeCCCCCc---cHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcC
Confidence            3568999999988652   2233223344555589999999999865432110       11122334445566666522


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhc
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRI  658 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  658 (790)
                         +..+++++|||+||.+++.++.++|   ++++++.+|......                     +            
T Consensus        72 ---~~~~~~l~G~S~Gg~~a~~~a~~~~---~~~~v~~~~~~~~~~---------------------~------------  112 (176)
T 2qjw_A           72 ---EKGPVVLAGSSLGSYIAAQVSLQVP---TRALFLMVPPTKMGP---------------------L------------  112 (176)
T ss_dssp             ---TTSCEEEEEETHHHHHHHHHHTTSC---CSEEEEESCCSCBTT---------------------B------------
T ss_pred             ---CCCCEEEEEECHHHHHHHHHHHhcC---hhheEEECCcCCccc---------------------c------------
Confidence               3479999999999999999999876   788888887643210                     0            


Q ss_pred             cCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       659 ~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                                                                                 ..+.++ ++|+|+++|++|..
T Consensus       113 -----------------------------------------------------------~~~~~~-~~P~l~i~g~~D~~  132 (176)
T 2qjw_A          113 -----------------------------------------------------------PALDAA-AVPISIVHAWHDEL  132 (176)
T ss_dssp             -----------------------------------------------------------CCCCCC-SSCEEEEEETTCSS
T ss_pred             -----------------------------------------------------------Cccccc-CCCEEEEEcCCCCc
Confidence                                                                       002234 79999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHH
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDS  787 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~  787 (790)
                      +|++.+..+++.+     +++++++ +++|.+....+++.+.+.+||++
T Consensus       133 ~~~~~~~~~~~~~-----~~~~~~~-~~~H~~~~~~~~~~~~i~~fl~~  175 (176)
T 2qjw_A          133 IPAADVIAWAQAR-----SARLLLV-DDGHRLGAHVQAASRAFAELLQS  175 (176)
T ss_dssp             SCHHHHHHHHHHH-----TCEEEEE-SSCTTCTTCHHHHHHHHHHHHHT
T ss_pred             cCHHHHHHHHHhC-----CceEEEe-CCCccccccHHHHHHHHHHHHHh
Confidence            9999999998887     3588888 88999865788899999999975

>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}

Probab=99.71  E-value=1.7e-16  Score=159.35  Aligned_cols=185  Identities=14%  Similarity=0.092  Sum_probs=131.2

Q ss_pred             EEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccch
Q psy463          485 VKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEI  564 (790)
Q Consensus       485 ~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~  564 (790)
                      +.++.|.... ..+++.|+||++||+++..   ..|.  .....++++||.|+++|++++.                 ..
T Consensus        34 ~~~~~p~~~~-~~g~~~p~vv~~HG~~~~~---~~~~--~~~~~l~~~G~~v~~~d~~~s~-----------------~~   90 (258)
T 2fx5_A           34 CRIYRPRDLG-QGGVRHPVILWGNGTGAGP---STYA--GLLSHWASHGFVVAAAETSNAG-----------------TG   90 (258)
T ss_dssp             EEEEEESSTT-GGGCCEEEEEEECCTTCCG---GGGH--HHHHHHHHHTCEEEEECCSCCT-----------------TS
T ss_pred             EEEEeCCCCc-ccCCCceEEEEECCCCCCc---hhHH--HHHHHHHhCCeEEEEecCCCCc-----------------cH
Confidence            6778887421 0123789999999998752   2222  2334444579999999999641                 12


Q ss_pred             hHHHHHHHHHHHh--------CCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCC
Q psy463          565 YDQINVTRYLQEN--------LPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGL  636 (790)
Q Consensus       565 ~D~~~~~~~l~~~--------~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~  636 (790)
                      .|+..+++++.+.        ...++.++++|+||||||.+++.++.  + ..++++++.+|....             .
T Consensus        91 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~--~-~~v~~~v~~~~~~~~-------------~  154 (258)
T 2fx5_A           91 REMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQ--D-TRVRTTAPIQPYTLG-------------L  154 (258)
T ss_dssp             HHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHTT--S-TTCCEEEEEEECCSS-------------T
T ss_pred             HHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhcc--C-cCeEEEEEecCcccc-------------c
Confidence            3444455555432        22467789999999999999999884  2 377888777663210             0


Q ss_pred             CCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhh
Q psy463          637 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAAL  716 (790)
Q Consensus       637 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  716 (790)
                      +                                                    ...                        
T Consensus       155 ~----------------------------------------------------~~~------------------------  158 (258)
T 2fx5_A          155 G----------------------------------------------------HDS------------------------  158 (258)
T ss_dssp             T----------------------------------------------------CCG------------------------
T ss_pred             c----------------------------------------------------cch------------------------
Confidence            0                                                    000                        


Q ss_pred             hhhhhccCCccEEEEecCCCcccchhh-hHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          717 NNKVDRIRDKQYLLVHGTMDDNVHFQQ-SMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       717 ~~~~~~i~~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                       ..+.++ ++|+|++||++|..+|+.. +..+++.   .+.+++++++++++|.+.. ..+.+.+.+.+||+++|
T Consensus       159 -~~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~l  228 (258)
T 2fx5_A          159 -ASQRRQ-QGPMFLMSGGGDTIAFPYLNAQPVYRR---ANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQL  228 (258)
T ss_dssp             -GGGGCC-SSCEEEEEETTCSSSCHHHHTHHHHHH---CSSCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHHH
T ss_pred             -hhhccC-CCCEEEEEcCCCcccCchhhHHHHHhc---cCCCeEEEEECCCCCccccchHHHHHHHHHHHHHHHh
Confidence             335567 8999999999999999886 8888776   3456899999999999887 78899999999999765

>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}

Probab=99.71  E-value=1.1e-16  Score=163.51  Aligned_cols=259  Identities=16%  Similarity=0.092  Sum_probs=147.0

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccc-ccccchHHHHHhcCCeEEEEEcCCCCCCChh-hhH
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE-RFSVDWNLYLADNKDIVVAYIDGRNSALKGN-TLK  552 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~-~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~-~~~  552 (790)
                      +...+|.++++..+.|.        ..|.||++||++++   .. .|.. .. ..++ .+|.|+++|+||+|.+.. ...
T Consensus         7 ~~~~~g~~l~~~~~G~~--------~~~~vvllHG~~~~---~~~~w~~-~~-~~L~-~~~~vi~~Dl~G~G~S~~~~~~   72 (286)
T 2yys_A            7 YVPVGEAELYVEDVGPV--------EGPALFVLHGGPGG---NAYVLRE-GL-QDYL-EGFRVVYFDQRGSGRSLELPQD   72 (286)
T ss_dssp             EEECSSCEEEEEEESCT--------TSCEEEEECCTTTC---CSHHHHH-HH-GGGC-TTSEEEEECCTTSTTSCCCCSC
T ss_pred             EEeECCEEEEEEeecCC--------CCCEEEEECCCCCc---chhHHHH-HH-HHhc-CCCEEEEECCCCCCCCCCCccC
Confidence            33448888988877542        23679999999886   23 3432 22 3344 689999999999887543 100


Q ss_pred             hhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccchh
Q psy463          553 YAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIYSE  631 (790)
Q Consensus       553 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~~~  631 (790)
                            .....+++..+.+..+++.++   .+++.|+||||||.+++.++.++|+  ++++|+.++........ ..+..
T Consensus        73 ------~~~~~~~~~a~dl~~ll~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~--v~~lvl~~~~~~~~~~~~~~~~~  141 (286)
T 2yys_A           73 ------PRLFTVDALVEDTLLLAEALG---VERFGLLAHGFGAVVALEVLRRFPQ--AEGAILLAPWVNFPWLAARLAEA  141 (286)
T ss_dssp             ------GGGCCHHHHHHHHHHHHHHTT---CCSEEEEEETTHHHHHHHHHHHCTT--EEEEEEESCCCBHHHHHHHHHHH
T ss_pred             ------cccCcHHHHHHHHHHHHHHhC---CCcEEEEEeCHHHHHHHHHHHhCcc--hheEEEeCCccCcHHHHHHHHHH
Confidence                  002346666666666666443   4689999999999999999999985  88888888865321100 00000


Q ss_pred             hhcC-CCCccCchhhhhh----ccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCC
Q psy463          632 RYMG-LPTFEDNLEGYKI----AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFED  706 (790)
Q Consensus       632 ~~~g-~~~~~~~~~~~~~----~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  706 (790)
                      .  + .+. ......+..    .......+.+     + .  ..+   ................         ..+....
T Consensus       142 ~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~-~--~~~---~~~~~~~~~~~~~~~~---------~~~~~~~  198 (286)
T 2yys_A          142 A--GLAPL-PDPEENLKEALKREEPKALFDRL-----M-F--PTP---RGRMAYEWLAEGAGIL---------GSDAPGL  198 (286)
T ss_dssp             T--TCCCC-SCHHHHHHHHHHHSCHHHHHHHH-----H-C--SSH---HHHHHHHHHHHHTTCC---------CCSHHHH
T ss_pred             h--ccccc-hhHHHHHHHHhccCChHHHHHhh-----h-c--cCC---ccccChHHHHHHHhhc---------cccccch
Confidence            0  0 000 000000000    0000000000     0 0  000   0000000111000000         0000000


Q ss_pred             --cchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHH
Q psy463          707 --NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLER  783 (790)
Q Consensus       707 --~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~  783 (790)
                        .............+.++ ++|+|+++|++|..++++ ++.+.+ ++..    +++++|++||.+.. .++++.+.|.+
T Consensus       199 ~~~~~~~~~~~~~~~l~~i-~~P~lvi~G~~D~~~~~~-~~~~~~-~~~~----~~~~i~~~gH~~~~e~p~~~~~~i~~  271 (286)
T 2yys_A          199 AFLRNGLWRLDYTPYLTPE-RRPLYVLVGERDGTSYPY-AEEVAS-RLRA----PIRVLPEAGHYLWIDAPEAFEEAFKE  271 (286)
T ss_dssp             HHHHTTGGGCBCGGGCCCC-SSCEEEEEETTCTTTTTT-HHHHHH-HHTC----CEEEETTCCSSHHHHCHHHHHHHHHH
T ss_pred             hhcccccccCChhhhhhhc-CCCEEEEEeCCCCcCCHh-HHHHHh-CCCC----CEEEeCCCCCCcChhhHHHHHHHHHH
Confidence              00000111122456778 999999999999999999 888888 7654    88999999999887 88899999999


Q ss_pred             HHHHh
Q psy463          784 FLDSC  788 (790)
Q Consensus       784 fl~~~  788 (790)
                      ||.+.
T Consensus       272 fl~~~  276 (286)
T 2yys_A          272 ALAAL  276 (286)
T ss_dssp             HHHTT
T ss_pred             HHHhh
Confidence            99863

>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}

Probab=99.71  E-value=4.2e-17  Score=173.83  Aligned_cols=146  Identities=14%  Similarity=0.085  Sum_probs=104.8

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccc--c---------cccc--c-chHHHHHhcCCeE
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQV--T---------ERFS--V-DWNLYLADNKDIV  535 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~--~---------~~~~--~-~~~~~~~~~~G~~  535 (790)
                      .+.+++.+.+|..+.++++.|.+    ..++.|+||++||.++....  .         +.|.  . .+. ..++++||+
T Consensus        87 ~e~v~~~~~~g~~l~~~l~~P~~----~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a-~~la~~G~~  161 (391)
T 3g8y_A           87 LEKWEFYPFPKSVSTFLVLKPEH----LKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMA-LNMVKEGYV  161 (391)
T ss_dssp             EEEEEECCSTTCCEEEEEEEETT----CCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHH-HHHHTTTCE
T ss_pred             EEEEEEEcCCCCEEEEEEEeCCC----CCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHH-HHHHHCCCE
Confidence            46678888899999999999975    24678999999998765210  0         0001  0 233 445568999


Q ss_pred             EEEEcCCCCCCChhhhHh--------hh--------hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHH
Q psy463          536 VAYIDGRNSALKGNTLKY--------AG--------YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATG  599 (790)
Q Consensus       536 v~~~d~rG~~~~g~~~~~--------~~--------~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~  599 (790)
                      |+++|+||+|.++.....        ..        ...+....+.|+.++++++.+ .+.+|..||+|+||||||++++
T Consensus       162 Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~-~~~vd~~rI~v~G~S~GG~~al  240 (391)
T 3g8y_A          162 AVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKA-QSYIRKDRIVISGFSLGTEPMM  240 (391)
T ss_dssp             EEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-CTTEEEEEEEEEEEGGGHHHHH
T ss_pred             EEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHh-ccCCCCCeEEEEEEChhHHHHH
Confidence            999999998765532110        00        011112234788999999987 7889999999999999999999


Q ss_pred             HHHhcCCCCceEEEEEeCCCCCcc
Q psy463          600 LALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       600 ~~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                      .++...+  +++++|+.+++..+.
T Consensus       241 ~~a~~~~--~i~a~v~~~~~~~~~  262 (391)
T 3g8y_A          241 VLGVLDK--DIYAFVYNDFLCQTQ  262 (391)
T ss_dssp             HHHHHCT--TCCEEEEESCBCCHH
T ss_pred             HHHHcCC--ceeEEEEccCCCCcc
Confidence            9988654  788988888876653

>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23

Probab=99.70  E-value=5.3e-17  Score=157.37  Aligned_cols=193  Identities=15%  Similarity=0.002  Sum_probs=134.5

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++..+.|.+     ....|+||++||+++..   ..|........++++||.|+++|+||.+.+.....   ...
T Consensus        15 ~g~~l~~~~~~p~~-----~~~~~~vv~~hG~~~~~---~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~---~~~   83 (210)
T 1imj_A           15 QGQALFFREALPGS-----GQARFSVLLLHGIRFSS---ETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAA---PAP   83 (210)
T ss_dssp             TTEEECEEEEECSS-----SCCSCEEEECCCTTCCH---HHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCC---SSC
T ss_pred             CCeEEEEEEeCCCC-----CCCCceEEEECCCCCcc---ceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCC---cch
Confidence            88999999998863     34568999999998763   23332102334455899999999999765432210   001


Q ss_pred             CCcc-chhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          559 LGTV-EIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       559 ~~~~-~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                      +... ...++...++.       ++.++++++|||+||.+++.++.++|. .++++++.+|.....              
T Consensus        84 ~~~~~~~~~~~~~~~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~-~v~~~v~~~~~~~~~--------------  141 (210)
T 1imj_A           84 IGELAPGSFLAAVVDA-------LELGPPVVISPSLSGMYSLPFLTAPGS-QLPGFVPVAPICTDK--------------  141 (210)
T ss_dssp             TTSCCCTHHHHHHHHH-------HTCCSCEEEEEGGGHHHHHHHHTSTTC-CCSEEEEESCSCGGG--------------
T ss_pred             hhhcchHHHHHHHHHH-------hCCCCeEEEEECchHHHHHHHHHhCcc-ccceEEEeCCCcccc--------------
Confidence            1111 11343333332       234689999999999999999998875 788888888753210              


Q ss_pred             CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                                                                          ...                         
T Consensus       142 ----------------------------------------------------~~~-------------------------  144 (210)
T 1imj_A          142 ----------------------------------------------------INA-------------------------  144 (210)
T ss_dssp             ----------------------------------------------------SCH-------------------------
T ss_pred             ----------------------------------------------------ccc-------------------------
Confidence                                                                000                         


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ..+.++ ++|+|+++|++|. ++.+.++.+ +.+.    .+++.++++++|.+.. .++.+.+.+.+||+++
T Consensus       145 ~~~~~~-~~p~l~i~g~~D~-~~~~~~~~~-~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~  209 (210)
T 1imj_A          145 ANYASV-KTPALIVYGDQDP-MGQTSFEHL-KQLP----NHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL  209 (210)
T ss_dssp             HHHHTC-CSCEEEEEETTCH-HHHHHHHHH-TTSS----SEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred             hhhhhC-CCCEEEEEcCccc-CCHHHHHHH-hhCC----CCCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence            334566 8999999999999 998887777 5443    4689999999999766 7788899999999864

>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*

Probab=99.70  E-value=3.8e-16  Score=153.34  Aligned_cols=190  Identities=13%  Similarity=0.067  Sum_probs=128.5

Q ss_pred             CCCCccEEEEEcCCCCccccccccccchHHHHHhc--CCeEEEEEcCCCCCCCh------hhhHh-hhh---ccCCccch
Q psy463          497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADN--KDIVVAYIDGRNSALKG------NTLKY-AGY---RRLGTVEI  564 (790)
Q Consensus       497 ~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~d~rG~~~~g------~~~~~-~~~---~~~~~~~~  564 (790)
                      +.++.|+||++||+++..   ..|.  .....+++  .||.|+++|++|.+...      ..|.+ ...   .......+
T Consensus        20 ~~~~~~~vv~lHG~~~~~---~~~~--~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~   94 (226)
T 3cn9_A           20 APNADACIIWLHGLGADR---TDFK--PVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQL   94 (226)
T ss_dssp             CTTCCEEEEEECCTTCCG---GGGH--HHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHH
T ss_pred             CCCCCCEEEEEecCCCCh---HHHH--HHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhH
Confidence            456789999999998763   2332  22333444  79999999887432100      00000 000   00011223


Q ss_pred             hH----HHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh-cCCCCceEEEEEeCCCCCcccccccchhhhcCCCCc
Q psy463          565 YD----QINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA-LDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTF  639 (790)
Q Consensus       565 ~D----~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~-~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~  639 (790)
                      .+    +.+.++.+.+ .+ ++..+++|+|||+||.+++.++. ++|. .++++++.+|......               
T Consensus        95 ~~~~~~~~~~~~~~~~-~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~~v~~~~~~~~~~---------------  156 (226)
T 3cn9_A           95 NASADQVIALIDEQRA-KG-IAAERIILAGFSQGGAVVLHTAFRRYAQ-PLGGVLALSTYAPTFD---------------  156 (226)
T ss_dssp             HHHHHHHHHHHHHHHH-TT-CCGGGEEEEEETHHHHHHHHHHHHTCSS-CCSEEEEESCCCGGGG---------------
T ss_pred             HHHHHHHHHHHHHHHH-cC-CCcccEEEEEECHHHHHHHHHHHhcCcc-CcceEEEecCcCCCch---------------
Confidence            33    3334444333 23 67789999999999999999999 8875 7899999888543210               


Q ss_pred             cCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhh
Q psy463          640 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNK  719 (790)
Q Consensus       640 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  719 (790)
                           .+          .                                                            ..
T Consensus       157 -----~~----------~------------------------------------------------------------~~  161 (226)
T 3cn9_A          157 -----DL----------A------------------------------------------------------------LD  161 (226)
T ss_dssp             -----GC----------C------------------------------------------------------------CC
T ss_pred             -----hh----------h------------------------------------------------------------hc
Confidence                 00          0                                                            00


Q ss_pred             hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          720 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       720 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      ..++ ++|+|+++|+.|..+|++.+..+++.++..+.++++++++ ++|.+..   +..+.+.+||+++|
T Consensus       162 ~~~~-~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~---~~~~~i~~~l~~~l  226 (226)
T 3cn9_A          162 ERHK-RIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSL---EEIHDIGAWLRKRL  226 (226)
T ss_dssp             TGGG-GCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCH---HHHHHHHHHHHHHC
T ss_pred             cccc-CCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcch---hhHHHHHHHHHhhC
Confidence            1244 7899999999999999999999999999998889999999 9998853   45678999998875

>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}

Probab=99.70  E-value=2.1e-17  Score=159.21  Aligned_cols=186  Identities=13%  Similarity=0.081  Sum_probs=111.8

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhc--CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADN--KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      |+||++||..++   ..++.......++++  .+|.|++||++|++   .+                ..+.++.+...  
T Consensus         3 ptIl~lHGf~ss---~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g---~~----------------~~~~l~~~~~~--   58 (202)
T 4fle_A            3 STLLYIHGFNSS---PSSAKATTFKSWLQQHHPHIEMQIPQLPPYP---AE----------------AAEMLESIVMD--   58 (202)
T ss_dssp             CEEEEECCTTCC---TTCHHHHHHHHHHHHHCTTSEEECCCCCSSH---HH----------------HHHHHHHHHHH--
T ss_pred             cEEEEeCCCCCC---CCccHHHHHHHHHHHcCCCcEEEEeCCCCCH---HH----------------HHHHHHHHHHh--
Confidence            799999997665   223333333444443  36999999999853   22                12223333332  


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR  659 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  659 (790)
                       .+.++|+|+|+||||++|+.++.+++. ...+++...+.......  ......          ..+.            
T Consensus        59 -~~~~~i~l~G~SmGG~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~----------~~~~------------  112 (202)
T 4fle_A           59 -KAGQSIGIVGSSLGGYFATWLSQRFSI-PAVVVNPAVRPFELLSD--YLGENQ----------NPYT------------  112 (202)
T ss_dssp             -HTTSCEEEEEETHHHHHHHHHHHHTTC-CEEEESCCSSHHHHGGG--GCEEEE----------CTTT------------
T ss_pred             -cCCCcEEEEEEChhhHHHHHHHHHhcc-cchheeeccchHHHHHH--hhhhhc----------cccc------------
Confidence             235799999999999999999999885 44444433332111000  000000          0000            


Q ss_pred             CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCccc
Q psy463          660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV  739 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v  739 (790)
                      ..+..             .........                           ......+.++ ++|+|++||++|.+|
T Consensus       113 ~~~~~-------------~~~~~~~~~---------------------------~~~~~~~~~~-~~P~LiihG~~D~~V  151 (202)
T 4fle_A          113 GQKYV-------------LESRHIYDL---------------------------KAMQIEKLES-PDLLWLLQQTGDEVL  151 (202)
T ss_dssp             CCEEE-------------ECHHHHHHH---------------------------HTTCCSSCSC-GGGEEEEEETTCSSS
T ss_pred             ccccc-------------chHHHHHHH---------------------------Hhhhhhhhcc-CceEEEEEeCCCCCC
Confidence            00000             000000000                           0111334566 899999999999999


Q ss_pred             chhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH
Q psy463          740 HFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD  786 (790)
Q Consensus       740 ~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~  786 (790)
                      |++++.++++       ++++.++||++|.+. +.+++++.|.+||+
T Consensus       152 p~~~s~~l~~-------~~~l~i~~g~~H~~~-~~~~~~~~I~~FL~  190 (202)
T 4fle_A          152 DYRQAVAYYT-------PCRQTVESGGNHAFV-GFDHYFSPIVTFLG  190 (202)
T ss_dssp             CHHHHHHHTT-------TSEEEEESSCCTTCT-TGGGGHHHHHHHHT
T ss_pred             CHHHHHHHhh-------CCEEEEECCCCcCCC-CHHHHHHHHHHHHh
Confidence            9999988763       358999999999876 46778899999996

>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0

Probab=99.70  E-value=1.8e-16  Score=159.03  Aligned_cols=246  Identities=13%  Similarity=0.106  Sum_probs=137.6

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |+||++||.+++.   ..|. .+. ..++++||.|+++|+||+|.+.....       ....+.+..+.+..++++.+ .
T Consensus         5 ~~vv~lHG~~~~~---~~~~-~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~l~~~l~~l~-~   71 (258)
T 3dqz_A            5 HHFVLVHNAYHGA---WIWY-KLK-PLLESAGHRVTAVELAASGIDPRPIQ-------AVETVDEYSKPLIETLKSLP-E   71 (258)
T ss_dssp             CEEEEECCTTCCG---GGGT-THH-HHHHHTTCEEEEECCTTSTTCSSCGG-------GCCSHHHHHHHHHHHHHTSC-T
T ss_pred             CcEEEECCCCCcc---ccHH-HHH-HHHHhCCCEEEEecCCCCcCCCCCCC-------ccccHHHhHHHHHHHHHHhc-c
Confidence            7899999998763   3344 233 44445799999999999886543211       11346666666666665332 1


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc-chhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI-YSERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                       ..++.|+||||||.+++.++.++|+ +++++++.++.......... ....+....      ..+..... ........
T Consensus        72 -~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~  142 (258)
T 3dqz_A           72 -NEEVILVGFSFGGINIALAADIFPA-KIKVLVFLNAFLPDTTHVPSHVLDKYMEMP------GGLGDCEF-SSHETRNG  142 (258)
T ss_dssp             -TCCEEEEEETTHHHHHHHHHTTCGG-GEEEEEEESCCCCCSSSCTTHHHHHHHTST------TCCTTCEE-EEEEETTE
T ss_pred             -cCceEEEEeChhHHHHHHHHHhChH-hhcEEEEecCCCCCCCCcchHHHHHhcccc------hhhhhccc-chhhhhcc
Confidence             2789999999999999999999885 89999988885432211100 001110000      00000000 00000000


Q ss_pred             CcEEEEeec------CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecC
Q psy463          661 KQYLLVHGT------MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGT  734 (790)
Q Consensus       661 ~p~l~~~g~------~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~  734 (790)
                      .+.......      .-...+...... ....... ..             .....+............ ++|+|+++|+
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~-~~P~l~i~g~  206 (258)
T 3dqz_A          143 TMSLLKMGPKFMKARLYQNCPIEDYEL-AKMLHRQ-GS-------------FFTEDLSKKEKFSEEGYG-SVQRVYVMSS  206 (258)
T ss_dssp             EEEEEECCHHHHHHHTSTTSCHHHHHH-HHHHCCC-EE-------------CCHHHHHTSCCCCTTTGG-GSCEEEEEET
T ss_pred             ChhhhhhhHHHHHHHhhccCCHHHHHH-HHHhccC-Cc-------------hhhhhhhccccccccccc-cCCEEEEECC
Confidence            000000000      000001111111 1110000 00             000000000111222223 6899999999


Q ss_pred             CCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          735 MDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       735 ~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      +|..+|++.+..+.+.++..    +++++|++||.+.. +++++.+.|.+|+++++
T Consensus       207 ~D~~~~~~~~~~~~~~~~~~----~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~  258 (258)
T 3dqz_A          207 EDKAIPCDFIRWMIDNFNVS----KVYEIDGGDHMVMLSKPQKLFDSLSAIATDYM  258 (258)
T ss_dssp             TCSSSCHHHHHHHHHHSCCS----CEEEETTCCSCHHHHSHHHHHHHHHHHHHHTC
T ss_pred             CCeeeCHHHHHHHHHhCCcc----cEEEcCCCCCchhhcChHHHHHHHHHHHHHhC
Confidence            99999999998888877543    88999999999887 89999999999999875

>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*

Probab=99.70  E-value=2.3e-16  Score=169.58  Aligned_cols=283  Identities=13%  Similarity=0.057  Sum_probs=153.8

Q ss_pred             EEEcCCCcEEEEEEEeCCC---CCCCCCCCccEEEEEcCCCCccccccccccchHHHHHh---cCCe---EEEEEcCCCC
Q psy463          474 SVPIQPNMEAQVKLFLPPG---IDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD---NKDI---VVAYIDGRNS  544 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~---~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~---~~G~---~v~~~d~rG~  544 (790)
                      ++...||.++++..+.|.+   ..  +.++.|+||++||.++..   ..|.. +...+.+   ..||   .|+++|+||+
T Consensus        24 ~~~~~dg~~l~~~~~g~~~~~~~~--~~~~~~~vvllHG~~~~~---~~~~~-~~~~L~~~~~~~G~~~~~vi~~D~~G~   97 (398)
T 2y6u_A           24 TLCATDRLELTYDVYTSAERQRRS--RTATRLNLVFLHGSGMSK---VVWEY-YLPRLVAADAEGNYAIDKVLLIDQVNH   97 (398)
T ss_dssp             BSSTTCCCEEEEEEEEESCTTTCC--TTCEEEEEEEECCTTCCG---GGGGG-GGGGSCCCBTTTTEEEEEEEEECCTTS
T ss_pred             cccCCCceEEEEEEEecCCCCCCC--CCCCCCeEEEEcCCCCcH---HHHHH-HHHHHHHhhhhcCcceeEEEEEcCCCC
Confidence            3445689999999998864   11  234568999999998763   33432 2333331   3489   9999999997


Q ss_pred             CCChhhhHhhhhccCCccchhHHHHHHHHHHHh-CCC--cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          545 ALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN-LPY--IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       545 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~--~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      |.+.....   ........+.+..+.+..+++. .+.  ++..+++|+||||||.+++.++.++|. +++++|+.+|...
T Consensus        98 G~S~~~~~---~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~  173 (398)
T 2y6u_A           98 GDSAVRNR---GRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPN-LFHLLILIEPVVI  173 (398)
T ss_dssp             HHHHHHTT---TTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTT-SCSEEEEESCCCS
T ss_pred             CCCCCCCc---cccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCch-heeEEEEeccccc
Confidence            65432210   0000112333443333333332 221  333459999999999999999999985 8999999988765


Q ss_pred             ccc--------cc-------ccchhhhc-CCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHH
Q psy463          622 WIY--------YD-------TIYSERYM-GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKS  685 (790)
Q Consensus       622 ~~~--------~~-------~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~  685 (790)
                      ...        ..       ..+...+. ...........+..     ......          .-..........+...
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----------~~~~~~~~~~~~~~~~  238 (398)
T 2y6u_A          174 TRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVK-----YMRNGS----------FFTNAHSQILQNIIDF  238 (398)
T ss_dssp             CCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHH-----HHHHTS----------TTTTSCHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhHHHhhhhccccCCCHHHHHH-----HhhcCc----------ccccCCHHHHHHHHHh
Confidence            311        00       00000000 00000000000000     000000          0000011111111110


Q ss_pred             HHhcCc---chhcccccCCC-------CcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcC
Q psy463          686 LQHADI---MFQSQRYMGLP-------TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD  755 (790)
Q Consensus       686 l~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g  755 (790)
                      . ....   ......+....       .+.. . ......+...+.++ ++|+|+++|++|..+|++.+..+.+.++   
T Consensus       239 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~i-~~PvLii~G~~D~~~~~~~~~~l~~~~~---  311 (398)
T 2y6u_A          239 E-RTKASGDDEDGGPVRTKMEQAQNLLCYMN-M-QTFAPFLISNVKFV-RKRTIHIVGARSNWCPPQNQLFLQKTLQ---  311 (398)
T ss_dssp             H-EEC--------CCEEESSCHHHHHHTTSC-G-GGTHHHHHHHGGGC-CSEEEEEEETTCCSSCHHHHHHHHHHCS---
T ss_pred             c-CccccccccCCCceEecCCchhhhhhhcc-c-ccchHHHHHhcccc-CCCEEEEEcCCCCCCCHHHHHHHHHhCC---
Confidence            0 0000   00000000000       0000 0 00111233567888 9999999999999999999888887765   


Q ss_pred             CceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          756 IMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       756 ~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                       .++++++|++||.+.. .++++.+.+.+||.+++
T Consensus       312 -~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~  345 (398)
T 2y6u_A          312 -NYHLDVIPGGSHLVNVEAPDLVIERINHHIHEFV  345 (398)
T ss_dssp             -SEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred             -CceEEEeCCCCccchhcCHHHHHHHHHHHHHHHH
Confidence             3589999999998876 78899999999998765

>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*

Probab=99.70  E-value=1.3e-16  Score=160.89  Aligned_cols=249  Identities=11%  Similarity=0.042  Sum_probs=138.8

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ...|+||++||.+++.   ..|.  .....++++||.|+++|+||+|.+.....       ....+.+..+.+..+++.+
T Consensus        10 ~~~~~vvllHG~~~~~---~~~~--~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~l~~l   77 (267)
T 3sty_A           10 FVKKHFVLVHAAFHGA---WCWY--KIVALMRSSGHNVTALDLGASGINPKQAL-------QIPNFSDYLSPLMEFMASL   77 (267)
T ss_dssp             CCCCEEEEECCTTCCG---GGGH--HHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHHHHHHHHHHTS
T ss_pred             CCCCeEEEECCCCCCc---chHH--HHHHHHHhcCCeEEEeccccCCCCCCcCC-------ccCCHHHHHHHHHHHHHhc
Confidence            4568999999998763   3333  23334555799999999999876554311       1134566666666666533


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc-cchhhhcCCCCccCchhhhhhccccchhhh
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT-IYSERYMGLPTFEDNLEGYKIAALNNKVDR  657 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  657 (790)
                      +  +..++.|+||||||.+++.++.++|+ +++++++.++......... .....+....      ..+..... .....
T Consensus        78 ~--~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~  147 (267)
T 3sty_A           78 P--ANEKIILVGHALGGLAISKAMETFPE-KISVAVFLSGLMPGPNIDATTVCTKAGSAV------LGQLDNCV-TYENG  147 (267)
T ss_dssp             C--TTSCEEEEEETTHHHHHHHHHHHSGG-GEEEEEEESCCCCBTTBCHHHHHHHHHHTT------TTCTTCEE-ECTTC
T ss_pred             C--CCCCEEEEEEcHHHHHHHHHHHhChh-hcceEEEecCCCCCCcchHHHHHHHhcccc------hhhhhhhh-hhhhh
Confidence            1  36899999999999999999999985 8999998887643221100 0000000000      00000000 00000


Q ss_pred             ccCCcEEEEeec------CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEE
Q psy463          658 IRDKQYLLVHGT------MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLV  731 (790)
Q Consensus       658 ~~~~p~l~~~g~------~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii  731 (790)
                      ....+.......      .-...+.. ..............             .....+............ ++|+|++
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~-~~P~l~i  212 (267)
T 3sty_A          148 PTNPPTTLIAGPKFLATNVYHLSPIE-DLALATALVRPLYL-------------YLAEDISKEVVLSSKRYG-SVKRVFI  212 (267)
T ss_dssp             TTSCCCEEECCHHHHHHHTSTTSCHH-HHHHHHHHCCCEEC-------------CCHHHHHHHCCCCTTTGG-GSCEEEE
T ss_pred             hhcccchhhhhHHHHHHhhcccCCHH-HHHHHHHhhccchh-------------HHHHHhhcchhccccccc-CCCEEEE
Confidence            000000000000      00000000 11111110000000             000001111111222223 6899999


Q ss_pred             ecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          732 HGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       732 ~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      +|++|..+|++.+..+.+.++.    ++++++|++||.+.. +++++.+.+.+|++++
T Consensus       213 ~g~~D~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~  266 (267)
T 3sty_A          213 VATENDALKKEFLKLMIEKNPP----DEVKEIEGSDHVTMMSKPQQLFTTLLSIANKY  266 (267)
T ss_dssp             ECCCSCHHHHHHHHHHHHHSCC----SEEEECTTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred             EeCCCCccCHHHHHHHHHhCCC----ceEEEeCCCCccccccChHHHHHHHHHHHHhc
Confidence            9999999999998888887754    489999999999887 8999999999999874

>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}

Probab=99.70  E-value=9.4e-16  Score=158.94  Aligned_cols=257  Identities=13%  Similarity=0.061  Sum_probs=146.6

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|..+++....+          .|+||++||+++..   ..|.  .....++ .+|.|+++|+||+|.+...        
T Consensus        56 ~~~~~~~~~~g~----------~p~vv~lhG~~~~~---~~~~--~~~~~L~-~~~~v~~~D~~G~G~S~~~--------  111 (314)
T 3kxp_A           56 GRITLNVREKGS----------GPLMLFFHGITSNS---AVFE--PLMIRLS-DRFTTIAVDQRGHGLSDKP--------  111 (314)
T ss_dssp             SSCEEEEEEECC----------SSEEEEECCTTCCG---GGGH--HHHHTTT-TTSEEEEECCTTSTTSCCC--------
T ss_pred             CCEEEEEEecCC----------CCEEEEECCCCCCH---HHHH--HHHHHHH-cCCeEEEEeCCCcCCCCCC--------
Confidence            777787765522          47899999988763   2332  2234455 3799999999998765411        


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcC-CC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMG-LP  637 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g-~~  637 (790)
                      .....+++..+.+..+++..   +..+++|+|||+||.+++.++.++|. .++++++.+|...............+. .+
T Consensus       112 ~~~~~~~~~~~dl~~~l~~l---~~~~v~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~  187 (314)
T 3kxp_A          112 ETGYEANDYADDIAGLIRTL---ARGHAILVGHSLGARNSVTAAAKYPD-LVRSVVAIDFTPYIETEALDALEARVNAGS  187 (314)
T ss_dssp             SSCCSHHHHHHHHHHHHHHH---TSSCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCTTCCHHHHHHHHHHTTTTC
T ss_pred             CCCCCHHHHHHHHHHHHHHh---CCCCcEEEEECchHHHHHHHHHhChh-heeEEEEeCCCCCCCcchhhHHHHHhhhch
Confidence            12245667777777766633   34799999999999999999999885 899999998865433211000001100 00


Q ss_pred             CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                      ........+...     ....            ....+.............. .. ........+............+..
T Consensus       188 ~~~~~~~~~~~~-----~~~~------------~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~  248 (314)
T 3kxp_A          188 QLFEDIKAVEAY-----LAGR------------YPNIPADAIRIRAESGYQP-VD-GGLRPLASSAAMAQTARGLRSDLV  248 (314)
T ss_dssp             SCBSSHHHHHHH-----HHHH------------STTSCHHHHHHHHHHSEEE-ET-TEEEESSCHHHHHHHHHHTTSCCH
T ss_pred             hhhcCHHHHHHH-----HHhh------------cccCchHHHHHHhhhhhcc-cc-cccccccChhhhhhhccccCcchh
Confidence            000000000000     0000            0000000000000000000 00 000000000000000000000233


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ..+.++ ++|+|+++|++|..+|++.+..+.+.++.    ++++++|+++|.+.. +++.+.+.|.+||++
T Consensus       249 ~~~~~i-~~P~Lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~  314 (314)
T 3kxp_A          249 PAYRDV-TKPVLIVRGESSKLVSAAALAKTSRLRPD----LPVVVVPGADHYVNEVSPEITLKAITNFIDA  314 (314)
T ss_dssp             HHHHHC-CSCEEEEEETTCSSSCHHHHHHHHHHCTT----SCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred             hHhhcC-CCCEEEEecCCCccCCHHHHHHHHHhCCC----ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence            567788 99999999999999999999998887754    488999999999876 788899999999974

>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}

Probab=99.70  E-value=3.1e-16  Score=155.69  Aligned_cols=222  Identities=12%  Similarity=0.076  Sum_probs=133.1

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHh--
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN--  577 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--  577 (790)
                      ..|+||++||.++..   ..|.  ....+ + +||.|+++|+||+|.+...         ....+++..+.+..+++.  
T Consensus        15 ~~~~vv~~hG~~~~~---~~~~--~~~~l-~-~g~~v~~~d~~g~g~s~~~---------~~~~~~~~~~~~~~~~~~~~   78 (245)
T 3e0x_A           15 SPNTLLFVHGSGCNL---KIFG--ELEKY-L-EDYNCILLDLKGHGESKGQ---------CPSTVYGYIDNVANFITNSE   78 (245)
T ss_dssp             CSCEEEEECCTTCCG---GGGT--TGGGG-C-TTSEEEEECCTTSTTCCSC---------CCSSHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEEeCCcccH---HHHH--HHHHH-H-hCCEEEEecCCCCCCCCCC---------CCcCHHHHHHHHHHHHHhhh
Confidence            458999999988873   3344  22333 3 7999999999998765411         123455666556555510  


Q ss_pred             -CCCcCCCceEEEEechHHHHHHHHHhc-CCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhcccc---
Q psy463          578 -LPYIDKTRTAIWGWSYGGYATGLALAL-DPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALN---  652 (790)
Q Consensus       578 -~~~~d~~ri~i~G~S~GG~~a~~~a~~-~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---  652 (790)
                       ...++  +++|+|||+||.+++.++.+ +|.  ++++++.+|..............+....    ....+......   
T Consensus        79 ~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~  150 (245)
T 3e0x_A           79 VTKHQK--NITLIGYSMGGAIVLGVALKKLPN--VRKVVSLSGGARFDKLDKDFMEKIYHNQ----LDNNYLLECIGGID  150 (245)
T ss_dssp             TTTTCS--CEEEEEETHHHHHHHHHHTTTCTT--EEEEEEESCCSBCTTSCHHHHHHHHTTC----CCHHHHHHHHTCSC
T ss_pred             hHhhcC--ceEEEEeChhHHHHHHHHHHhCcc--ccEEEEecCCCccccccHHHHHHHHHHH----HHhhcCcccccccc
Confidence             01233  99999999999999999998 875  9999999987665322111111110000    00000000000   


Q ss_pred             -chhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEE
Q psy463          653 -NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLV  731 (790)
Q Consensus       653 -~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii  731 (790)
                       .......          ................+.                         .......+.++ ++|+|++
T Consensus       151 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~-~~P~l~i  194 (245)
T 3e0x_A          151 NPLSEKYF----------ETLEKDPDIMINDLIACK-------------------------LIDLVDNLKNI-DIPVKAI  194 (245)
T ss_dssp             SHHHHHHH----------TTSCSSHHHHHHHHHHHH-------------------------HCBCGGGGGGC-CSCEEEE
T ss_pred             hHHHHHHH----------HHHhcCcHHHHHHHHHhc-------------------------cccHHHHHHhC-CCCEEEE
Confidence             0000000          000000000111111111                         11222567788 9999999


Q ss_pred             ecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463          732 HGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL  785 (790)
Q Consensus       732 ~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl  785 (790)
                      +|++|..+|++.+..+.+.++.    ++++++|+++|.+.. +++++.+.+.+||
T Consensus       195 ~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~~~~~~~~i~~fl  245 (245)
T 3e0x_A          195 VAKDELLTLVEYSEIIKKEVEN----SELKIFETGKHFLLVVNAKGVAEEIKNFI  245 (245)
T ss_dssp             EETTCSSSCHHHHHHHHHHSSS----EEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred             EeCCCCCCCHHHHHHHHHHcCC----ceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence            9999999999999888887753    599999999999876 7777888887774

>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3

Probab=99.70  E-value=5.5e-16  Score=159.36  Aligned_cols=255  Identities=12%  Similarity=0.063  Sum_probs=149.9

Q ss_pred             CceEEEEEEcCC-CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc-hHHHHHhcCCeEEEEEcCCCCC
Q psy463          468 PSVEYMSVPIQP-NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-WNLYLADNKDIVVAYIDGRNSA  545 (790)
Q Consensus       468 ~~~~~~~~~~~d-g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~~~~~~~~G~~v~~~d~rG~~  545 (790)
                      .+++.+++.+.. |.++..+ +.|.      .+++|+|+++||+++... ...|... ....++++.|++|+++|.++++
T Consensus         7 ~~v~~~~~~S~~~~~~i~v~-~~p~------~~~~p~vvllHG~~~~~~-~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~   78 (304)
T 1sfr_A            7 LPVEYLQVPSPSMGRDIKVQ-FQSG------GANSPALYLLDGLRAQDD-FSGWDINTPAFEWYDQSGLSVVMPVGGQSS   78 (304)
T ss_dssp             CCCEEEEEEETTTTEEEEEE-EECC------STTBCEEEEECCTTCCSS-SCHHHHHCCHHHHHTTSSCEEEEECCCTTC
T ss_pred             ceEEEEEEECccCCCceEEE-ECCC------CCCCCEEEEeCCCCCCCC-cchhhcCCCHHHHHhcCCeEEEEECCCCCc
Confidence            345667777653 6677766 4443      256899999999853211 2233321 1235566689999999997753


Q ss_pred             CChhhhHhh--hhccCCccchhHHH--HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          546 LKGNTLKYA--GYRRLGTVEIYDQI--NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       546 ~~g~~~~~~--~~~~~~~~~~~D~~--~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      .+.. +...  ..+..+...+.+..  +.+.++.++++ ++.++++|+|+||||++|+.++.++|+ .|+++++.+|..+
T Consensus        79 ~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~-~~~~~~~l~G~S~GG~~al~~a~~~p~-~~~~~v~~sg~~~  155 (304)
T 1sfr_A           79 FYSD-WYQPACGKAGCQTYKWETFLTSELPGWLQANRH-VKPTGSAVVGLSMAASSALTLAIYHPQ-QFVYAGAMSGLLD  155 (304)
T ss_dssp             TTCB-CSSCEEETTEEECCBHHHHHHTHHHHHHHHHHC-BCSSSEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCCSC
T ss_pred             cccc-cCCccccccccccccHHHHHHHHHHHHHHHHCC-CCCCceEEEEECHHHHHHHHHHHhCcc-ceeEEEEECCccC
Confidence            3211 0000  00000012233321  33444444344 667799999999999999999999985 8999999999765


Q ss_pred             cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463          622 WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL  701 (790)
Q Consensus       622 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~  701 (790)
                      +....  +.+             .. ..    ......         ..+       ...                ..+.
T Consensus       156 ~~~~~--~~~-------------~~-~~----~~~~~~---------~~~-------~~~----------------~~g~  183 (304)
T 1sfr_A          156 PSQAM--GPT-------------LI-GL----AMGDAG---------GYK-------ASD----------------MWGP  183 (304)
T ss_dssp             TTSTT--HHH-------------HH-HH----HHHHTT---------SCC-------HHH----------------HHCS
T ss_pred             ccccc--hhh-------------hh-hH----hhhhcc---------ccc-------hHH----------------hcCC
Confidence            43210  000             00 00    000000         000       000                0000


Q ss_pred             CCcCCcchhhhhhhhhhhhhcc--CCccEEEEecCCCc--------------ccchhhhHHHHHHHHhcC-CceEEEEcC
Q psy463          702 PTFEDNLEGYKIAALNNKVDRI--RDKQYLLVHGTMDD--------------NVHFQQSMMLAKSLQHAD-IMFQSQTYP  764 (790)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~i--~~~P~Lii~G~~D~--------------~v~~~~~~~l~~~l~~~g-~~~~~~~~p  764 (790)
                      +    ....+...++...+.++  +.+|+++++|+.|.              .++...++++++.|+++| +++++.+|+
T Consensus       184 ~----~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~G~~~v~~~~~~  259 (304)
T 1sfr_A          184 K----EDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPD  259 (304)
T ss_dssp             T----TSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCS
T ss_pred             c----chhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHHHHHHHHHHHHHhCCCCceEEEecC
Confidence            0    00112222222333333  36899999999998              678999999999999999 999999997


Q ss_pred             CCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          765 DEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       765 ~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      +.+|.+. .....+..++.||.++|.
T Consensus       260 ~g~H~~~-~w~~~l~~~l~~l~~~l~  284 (304)
T 1sfr_A          260 SGTHSWE-YWGAQLNAMKPDLQRALG  284 (304)
T ss_dssp             CCCSSHH-HHHHHHHHTHHHHHHHHT
T ss_pred             CCccCHH-HHHHHHHHHHHHHHHhcC
Confidence            7799764 345556778888887763

>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A

Probab=99.70  E-value=6e-16  Score=158.63  Aligned_cols=269  Identities=14%  Similarity=0.125  Sum_probs=143.2

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++..+.+       +.+.|.||++||+++..   ..|... ...++ +.||.|+++|+||+|.+.... .     
T Consensus        13 ~g~~l~~~~~g~-------~~~~~~vvllHG~~~~~---~~~~~~-~~~l~-~~g~~vi~~D~~G~G~S~~~~-~-----   74 (293)
T 1mtz_A           13 NGIYIYYKLCKA-------PEEKAKLMTMHGGPGMS---HDYLLS-LRDMT-KEGITVLFYDQFGCGRSEEPD-Q-----   74 (293)
T ss_dssp             TTEEEEEEEECC-------SSCSEEEEEECCTTTCC---SGGGGG-GGGGG-GGTEEEEEECCTTSTTSCCCC-G-----
T ss_pred             CCEEEEEEEECC-------CCCCCeEEEEeCCCCcc---hhHHHH-HHHHH-hcCcEEEEecCCCCccCCCCC-C-----
Confidence            677887776532       11236789999987652   122212 22333 479999999999988654321 0     


Q ss_pred             CCccchhHHHHHHHHHHHhC-CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc-CC
Q psy463          559 LGTVEIYDQINVTRYLQENL-PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM-GL  636 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~-~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~-g~  636 (790)
                       ....+++..+.+..+++.+ +   .+++.|+||||||.+++.+|.++|+ +++++|+.+|........... .... ..
T Consensus        75 -~~~~~~~~~~dl~~~~~~l~~---~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~-~~~~~~~  148 (293)
T 1mtz_A           75 -SKFTIDYGVEEAEALRSKLFG---NEKVFLMGSSYGGALALAYAVKYQD-HLKGLIVSGGLSSVPLTVKEM-NRLIDEL  148 (293)
T ss_dssp             -GGCSHHHHHHHHHHHHHHHHT---TCCEEEEEETHHHHHHHHHHHHHGG-GEEEEEEESCCSBHHHHHHHH-HHHHHTS
T ss_pred             -CcccHHHHHHHHHHHHHHhcC---CCcEEEEEecHHHHHHHHHHHhCch-hhheEEecCCccChHHHHHHH-HHHHHhc
Confidence             1133455555555555433 3   3689999999999999999998885 899999998876532110000 0000 00


Q ss_pred             CCccCchhhhhhc-------cc--cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc
Q psy463          637 PTFEDNLEGYKIA-------AL--NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN  707 (790)
Q Consensus       637 ~~~~~~~~~~~~~-------~~--~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  707 (790)
                      +  ..........       ..  ......+.. .    ........+ .........+.... .+..+   ..+.....
T Consensus       149 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~---~~~~~~~~  216 (293)
T 1mtz_A          149 P--AKYRDAIKKYGSSGSYENPEYQEAVNYFYH-Q----HLLRSEDWP-PEVLKSLEYAERRN-VYRIM---NGPNEFTI  216 (293)
T ss_dssp             C--HHHHHHHHHHHHHTCTTCHHHHHHHHHHHH-H----HTSCSSCCC-HHHHHHHHHHHHSS-HHHHH---TCSBTTBC
T ss_pred             C--HHHHHHHHHhhccCCcChHHHHHHHHHHHH-h----hcccccCch-HHHHHhHhhhccch-hhhhc---cCcceecc
Confidence            0  0000000000       00  000000000 0    000000000 00111111000000 00000   00000000


Q ss_pred             chhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          708 LEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       708 ~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      ............+.++ ++|+|+++|++| .+++..+..+.+.++.    ++++++|++||.+.. .++++.+.+.+||.
T Consensus       217 ~~~~~~~~~~~~l~~i-~~P~lii~G~~D-~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~  290 (293)
T 1mtz_A          217 TGTIKDWDITDKISAI-KIPTLITVGEYD-EVTPNVARVIHEKIAG----SELHVFRDCSHLTMWEDREGYNKLLSDFIL  290 (293)
T ss_dssp             CSTTTTCBCTTTGGGC-CSCEEEEEETTC-SSCHHHHHHHHHHSTT----CEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred             cccccCCChhhhhccC-CCCEEEEeeCCC-CCCHHHHHHHHHhCCC----ceEEEeCCCCCCccccCHHHHHHHHHHHHH
Confidence            0001111233567788 999999999999 6777777777776643    589999999999877 88999999999998


Q ss_pred             Hhh
Q psy463          787 SCF  789 (790)
Q Consensus       787 ~~l  789 (790)
                      ++|
T Consensus       291 ~~l  293 (293)
T 1mtz_A          291 KHL  293 (293)
T ss_dssp             TCC
T ss_pred             hcC
Confidence            764

>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}

Probab=99.69  E-value=5.5e-16  Score=161.74  Aligned_cols=277  Identities=13%  Similarity=0.098  Sum_probs=142.7

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....+.+    ...+.+.||++||++++.   ..|... ...+....||.|+++|+||+|.+...-. .   .
T Consensus        36 ~g~~l~y~~~G~~~----~~~~g~plvllHG~~~~~---~~w~~~-~~~l~~~~~~~Via~D~rG~G~S~~~~~-~---~  103 (330)
T 3nwo_A           36 GDHETWVQVTTPEN----AQPHALPLIVLHGGPGMA---HNYVAN-IAALADETGRTVIHYDQVGCGNSTHLPD-A---P  103 (330)
T ss_dssp             TTEEEEEEEECCSS----CCTTCCCEEEECCTTTCC---SGGGGG-GGGHHHHHTCCEEEECCTTSTTSCCCTT-S---C
T ss_pred             cCcEEEEEEecCcc----CCCCCCcEEEECCCCCCc---hhHHHH-HHHhccccCcEEEEECCCCCCCCCCCCC-C---c
Confidence            78899988887642    111112578899988763   334322 2333322599999999999887643100 0   0


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                      .....++++.+.+..+++.++   .+++.|+||||||.+++.+|.++|+ +++.+++.++..................+ 
T Consensus       104 ~~~~~~~~~a~dl~~ll~~lg---~~~~~lvGhSmGG~va~~~A~~~P~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-  178 (330)
T 3nwo_A          104 ADFWTPQLFVDEFHAVCTALG---IERYHVLGQSWGGMLGAEIAVRQPS-GLVSLAICNSPASMRLWSEAAGDLRAQLP-  178 (330)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHT---CCSEEEEEETHHHHHHHHHHHTCCT-TEEEEEEESCCSBHHHHHHHHHHHHHHSC-
T ss_pred             cccccHHHHHHHHHHHHHHcC---CCceEEEecCHHHHHHHHHHHhCCc-cceEEEEecCCcchHHHHHHHHHHHHhcC-
Confidence            011234445444555554333   4789999999999999999999986 77777777665432111000000000000 


Q ss_pred             ccCchhhhhhc---cc------cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          639 FEDNLEGYKIA---AL------NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       639 ~~~~~~~~~~~---~~------~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                       ..........   ..      ......+....+    .... .. ..........+......+..   ...+.......
T Consensus       179 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  248 (330)
T 3nwo_A          179 -AETRAALDRHEAAGTITHPDYLQAAAEFYRRHV----CRVV-PT-PQDFADSVAQMEAEPTVYHT---MNGPNEFHVVG  248 (330)
T ss_dssp             -HHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHT----CCSS-SC-CHHHHHHHHHHHHSCHHHHH---HTCSCSSSCCS
T ss_pred             -HHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhh----cccc-CC-CHHHHHHHHhhccchhhhhc---ccCchhhhhhc
Confidence             0000000000   00      000000000000    0000 00 00011111111100000000   00000000001


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ..........+.+| ++|+|+|+|++|..+|. .+..+.+.++    ..+++++|++||.++. .++++.+.|.+||+++
T Consensus       249 ~~~~~~~~~~l~~i-~~P~Lvi~G~~D~~~p~-~~~~~~~~ip----~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~~  322 (330)
T 3nwo_A          249 TLGDWSVIDRLPDV-TAPVLVIAGEHDEATPK-TWQPFVDHIP----DVRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQH  322 (330)
T ss_dssp             GGGGCBCGGGGGGC-CSCEEEEEETTCSSCHH-HHHHHHHHCS----SEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHH
T ss_pred             cccCCchhhhcccC-CCCeEEEeeCCCccChH-HHHHHHHhCC----CCcEEEeCCCCCchhhcCHHHHHHHHHHHHHhc
Confidence            11122233567888 99999999999998764 5566666554    3599999999999887 8899999999999875

>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A

Probab=99.69  E-value=3.5e-16  Score=155.88  Aligned_cols=224  Identities=13%  Similarity=0.101  Sum_probs=129.3

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCc-cchhHHHHHHHHHHHhCCC
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGT-VEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~  580 (790)
                      |.||++||.+++.   ..|.  .....++++||.|+++|+||+|.+....     ..+.. ..++|+.++++++.+ ++ 
T Consensus        17 ~~vvllHG~~~~~---~~~~--~~~~~L~~~g~~vi~~D~~GhG~s~~~~-----~~~~~~~~~~d~~~~~~~l~~-~~-   84 (247)
T 1tqh_A           17 RAVLLLHGFTGNS---ADVR--MLGRFLESKGYTCHAPIYKGHGVPPEEL-----VHTGPDDWWQDVMNGYEFLKN-KG-   84 (247)
T ss_dssp             CEEEEECCTTCCT---HHHH--HHHHHHHHTTCEEEECCCTTSSSCHHHH-----TTCCHHHHHHHHHHHHHHHHH-HT-
T ss_pred             cEEEEECCCCCCh---HHHH--HHHHHHHHCCCEEEecccCCCCCCHHHh-----cCCCHHHHHHHHHHHHHHHHH-cC-
Confidence            6789999988762   3333  2334455579999999999988543221     01111 113455555666655 33 


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                        .+++.|+||||||.+++.++.++|   ++++++.++........ .....+          ..+...     ..... 
T Consensus        85 --~~~~~lvG~SmGG~ia~~~a~~~p---v~~lvl~~~~~~~~~~~-~~~~~~----------~~~~~~-----~~~~~-  142 (247)
T 1tqh_A           85 --YEKIAVAGLSLGGVFSLKLGYTVP---IEGIVTMCAPMYIKSEE-TMYEGV----------LEYARE-----YKKRE-  142 (247)
T ss_dssp             --CCCEEEEEETHHHHHHHHHHTTSC---CSCEEEESCCSSCCCHH-HHHHHH----------HHHHHH-----HHHHH-
T ss_pred             --CCeEEEEEeCHHHHHHHHHHHhCC---CCeEEEEcceeecCcch-hhhHHH----------HHHHHH-----hhccc-
Confidence              368999999999999999999887   55555443322110000 000000          000000     00000 


Q ss_pred             CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhh--hhhhhhhhccCCccEEEEecCCCcc
Q psy463          661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKI--AALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                             +     ............+...            +  .........  ......+.++ ++|+|++||++|..
T Consensus       143 -------~-----~~~~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~l~~i-~~P~Lii~G~~D~~  195 (247)
T 1tqh_A          143 -------G-----KSEEQIEQEMEKFKQT------------P--MKTLKALQELIADVRDHLDLI-YAPTFVVQARHDEM  195 (247)
T ss_dssp             -------T-----CCHHHHHHHHHHHTTS------------C--CTTHHHHHHHHHHHHHTGGGC-CSCEEEEEETTCSS
T ss_pred             -------c-----cchHHHHhhhhcccCC------------C--HHHHHHHHHHHHHHHhhcccC-CCCEEEEecCCCCC
Confidence                   0     0000000111111000            0  000000000  1223567788 99999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHh
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSC  788 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~  788 (790)
                      +|++.++.+++.++..  .++++++|++||.+..  .++++.+.+.+||++.
T Consensus       196 ~p~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~  245 (247)
T 1tqh_A          196 INPDSANIIYNEIESP--VKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL  245 (247)
T ss_dssp             SCTTHHHHHHHHCCCS--SEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred             CCcchHHHHHHhcCCC--ceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence            9999999998877642  3689999999999876  3689999999999863

>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}

Probab=99.69  E-value=4.7e-16  Score=148.58  Aligned_cols=183  Identities=13%  Similarity=0.026  Sum_probs=121.6

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcC-CeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNK-DIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      +.|+||++||+++.......|.. +....++++ ||.|+++|+||...                  .+....++.+.+..
T Consensus         3 ~~p~vv~lHG~~~~~~~~~~~~~-~~~~~l~~~~g~~vi~~d~~g~~~------------------~~~~~~~~~~~~~l   63 (194)
T 2qs9_A            3 SPSKAVIVPGNGGGDVTTHGWYG-WVKKELEKIPGFQCLAKNMPDPIT------------------ARESIWLPFMETEL   63 (194)
T ss_dssp             CCCEEEEECCSSSSCTTTSTTHH-HHHHHHTTSTTCCEEECCCSSTTT------------------CCHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCCcccchHHH-HHHHHHhhccCceEEEeeCCCCCc------------------ccHHHHHHHHHHHh
Confidence            45899999999876210122322 233455546 99999999998421                  12334455566533


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhc
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRI  658 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  658 (790)
                      + . ..+++|+||||||.+++.++.++|   ++++++.+|......                .....         ...+
T Consensus        64 ~-~-~~~~~lvG~S~Gg~ia~~~a~~~p---v~~lvl~~~~~~~~~----------------~~~~~---------~~~~  113 (194)
T 2qs9_A           64 H-C-DEKTIIIGHSSGAIAAMRYAETHR---VYAIVLVSAYTSDLG----------------DENER---------ASGY  113 (194)
T ss_dssp             C-C-CTTEEEEEETHHHHHHHHHHHHSC---CSEEEEESCCSSCTT----------------CHHHH---------HTST
T ss_pred             C-c-CCCEEEEEcCcHHHHHHHHHHhCC---CCEEEEEcCCccccc----------------hhhhH---------HHhh
Confidence            3 2 278999999999999999999887   888888888643210                00000         0000


Q ss_pred             cCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       659 ~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                                                              ...+            .....+.++ .+|+|+++|++|..
T Consensus       114 ----------------------------------------~~~~------------~~~~~~~~~-~~p~lii~G~~D~~  140 (194)
T 2qs9_A          114 ----------------------------------------FTRP------------WQWEKIKAN-CPYIVQFGSTDDPF  140 (194)
T ss_dssp             ----------------------------------------TSSC------------CCHHHHHHH-CSEEEEEEETTCSS
T ss_pred             ----------------------------------------hccc------------ccHHHHHhh-CCCEEEEEeCCCCc
Confidence                                                    0000            001334455 78999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      +|++.+..+.+.+ .    .++.++|+++|.+.....+.+..+.+||++..
T Consensus       141 vp~~~~~~~~~~~-~----~~~~~~~~~gH~~~~~~p~~~~~~~~fl~~~~  186 (194)
T 2qs9_A          141 LPWKEQQEVADRL-E----TKLHKFTDCGHFQNTEFHELITVVKSLLKVPA  186 (194)
T ss_dssp             SCHHHHHHHHHHH-T----CEEEEESSCTTSCSSCCHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHHHhc-C----CeEEEeCCCCCccchhCHHHHHHHHHHHHhhh
Confidence            9999999998888 3    38899999999988744555667779998653

>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3

Probab=99.69  E-value=8.1e-16  Score=155.95  Aligned_cols=248  Identities=14%  Similarity=0.100  Sum_probs=146.2

Q ss_pred             CceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc-hHHHHHhcCCeEEEEEcCCCCC
Q psy463          468 PSVEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-WNLYLADNKDIVVAYIDGRNSA  545 (790)
Q Consensus       468 ~~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~~~~~~~~G~~v~~~d~rG~~  545 (790)
                      .+.+.+++.+. .|.++.++ +.|.+        .|+||++||++.... ...|... ....++++.|++|+++|+++++
T Consensus         9 ~~~~~~~~~S~~~~~~~~~~-~~P~~--------~p~vvllHG~~~~~~-~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~   78 (280)
T 1r88_A            9 APYENLMVPSPSMGRDIPVA-FLAGG--------PHAVYLLDAFNAGPD-VSNWVTAGNAMNTLAGKGISVVAPAGGAYS   78 (280)
T ss_dssp             CCCEEEEEEETTTTEEEEEE-EECCS--------SSEEEEECCSSCCSS-SCHHHHTSCHHHHHTTSSSEEEEECCCTTS
T ss_pred             CCEEEEEEECcccCCcceEE-EeCCC--------CCEEEEECCCCCCCC-hhhhhhcccHHHHHhcCCeEEEEECCCCCC
Confidence            34567777765 67888888 77752        279999999953211 2233321 1345566689999999997654


Q ss_pred             CChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc
Q psy463          546 LKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY  625 (790)
Q Consensus       546 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~  625 (790)
                      .+.. +.......+.....+|   .+.++.++++ ++.++++|+|+||||++|+.++.++|+ .|+++++.+|..++...
T Consensus        79 ~~~~-~~~~~~~~~~~~~~~~---l~~~i~~~~~-~~~~~~~l~G~S~GG~~al~~a~~~p~-~~~~~v~~sg~~~~~~~  152 (280)
T 1r88_A           79 MYTN-WEQDGSKQWDTFLSAE---LPDWLAANRG-LAPGGHAAVGAAQGGYGAMALAAFHPD-RFGFAGSMSGFLYPSNT  152 (280)
T ss_dssp             TTSB-CSSCTTCBHHHHHHTH---HHHHHHHHSC-CCSSCEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCCCCTTSH
T ss_pred             ccCC-CCCCCCCcHHHHHHHH---HHHHHHHHCC-CCCCceEEEEECHHHHHHHHHHHhCcc-ceeEEEEECCccCcCCc
Confidence            3211 0000001111111223   3334444355 677899999999999999999999985 89999999998664321


Q ss_pred             cccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463          626 DTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE  705 (790)
Q Consensus       626 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  705 (790)
                      ..               .......     .....                              ...  ...+.+.+   
T Consensus       153 ~~---------------~~~~~~~-----~~~~~------------------------------~~~--~~~~~g~~---  177 (280)
T 1r88_A          153 TT---------------NGAIAAG-----MQQFG------------------------------GVD--TNGMWGAP---  177 (280)
T ss_dssp             HH---------------HHHHHHH-----HHHHH------------------------------CCC--THHHHCCG---
T ss_pred             cc---------------hhhHHHH-----hhhcc------------------------------ccc--hhhhcCCC---
Confidence            00               0000000     00000                              000  00000000   


Q ss_pred             Ccchhhhhhhhhhhhhcc--CCccEEEEe----cCCCcc-------cchhhhHHHHHHHHhcC-CceEEEEcCCCCCcCC
Q psy463          706 DNLEGYKIAALNNKVDRI--RDKQYLLVH----GTMDDN-------VHFQQSMMLAKSLQHAD-IMFQSQTYPDEEHGLI  771 (790)
Q Consensus       706 ~~~~~~~~~~~~~~~~~i--~~~P~Lii~----G~~D~~-------v~~~~~~~l~~~l~~~g-~~~~~~~~p~~~H~~~  771 (790)
                       ....+...++...++++  +.+|++++|    |+.|..       ++..+++++++.|+++| +++++.++++.+|.+.
T Consensus       178 -~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~  256 (280)
T 1r88_A          178 -QLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGHNGHFDFPASGDNGWG  256 (280)
T ss_dssp             -GGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHTTCCSEEEECCSSCCSSHH
T ss_pred             -chhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHHHHHCCCcceEEEecCCCCcChh
Confidence             00112223333444444  368999999    999984       68999999999999999 9999999888899765


Q ss_pred             CcchHHHHHHHHHHHHh
Q psy463          772 GVRPHFYHTLERFLDSC  788 (790)
Q Consensus       772 ~~~~~~~~~i~~fl~~~  788 (790)
                      . ....+...+.||.+.
T Consensus       257 ~-w~~~l~~~l~~~~~~  272 (280)
T 1r88_A          257 S-WAPQLGAMSGDIVGA  272 (280)
T ss_dssp             H-HHHHHHHHHHHHHHH
T ss_pred             H-HHHHHHHHHHHHHHH
Confidence            2 334444555555443

>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A

Probab=99.69  E-value=1.5e-16  Score=161.70  Aligned_cols=259  Identities=12%  Similarity=0.095  Sum_probs=143.0

Q ss_pred             CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463          478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR  557 (790)
Q Consensus       478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~  557 (790)
                      .+|.++++..+.         .+ |.||++||.+++.   ..|.  .....++++||.|+++|+||+|.+....      
T Consensus        10 ~~g~~l~y~~~g---------~g-~pvvllHG~~~~~---~~~~--~~~~~L~~~g~~vi~~D~~G~G~S~~~~------   68 (277)
T 1brt_A           10 STSIDLYYEDHG---------TG-QPVVLIHGFPLSG---HSWE--RQSAALLDAGYRVITYDRRGFGQSSQPT------   68 (277)
T ss_dssp             TEEEEEEEEEEC---------SS-SEEEEECCTTCCG---GGGH--HHHHHHHHTTCEEEEECCTTSTTSCCCS------
T ss_pred             CCCcEEEEEEcC---------CC-CeEEEECCCCCcH---HHHH--HHHHHHhhCCCEEEEeCCCCCCCCCCCC------
Confidence            467777766541         12 3488999998762   3343  2233455579999999999988754321      


Q ss_pred             cCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          558 RLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       558 ~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                        ....+++..+.+..+++.+   +..++.|+||||||.+++.++.++|+.+++++|+.++...............  .+
T Consensus        69 --~~~~~~~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~--~~  141 (277)
T 1brt_A           69 --TGYDYDTFAADLNTVLETL---DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGA--AP  141 (277)
T ss_dssp             --SCCSHHHHHHHHHHHHHHH---TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCS--BC
T ss_pred             --CCccHHHHHHHHHHHHHHh---CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCcccc--cc
Confidence              1234555555555555533   3478999999999999999999988548899998887533211000000000  00


Q ss_pred             CccCchhhhhhc---cc---c-chhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463          638 TFEDNLEGYKIA---AL---N-NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG  710 (790)
Q Consensus       638 ~~~~~~~~~~~~---~~---~-~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  710 (790)
                        ......+...   ..   . .....+....     ......+.........+.....+.....          .....
T Consensus       142 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~  204 (277)
T 1brt_A          142 --QEFFDGIVAAVKADRYAFYTGFFNDFYNLD-----ENLGTRISEEAVRNSWNTAASGGFFAAA----------AAPTT  204 (277)
T ss_dssp             --HHHHHHHHHHHHHCHHHHHHHHHHHHTTHH-----HHBTTTBCHHHHHHHHHHHHHSCHHHHH----------HGGGG
T ss_pred             --HHHHHHHHHHHhcCchhhHHHHHHHHhhcc-----ccccccCCHHHHHHHHHHHhccchHHHH----------HHHHH
Confidence              0000000000   00   0 0000000000     0000011111111111111111110000          00000


Q ss_pred             hhhhhhhhhhhccCCccEEEEecCCCcccchhhh-HHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          711 YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQS-MMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       711 ~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~-~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      + .......+.++ ++|+|+++|++|..+|+..+ ..+.+.++.    ++++++|++||.+.. .++++.+.|.+||++
T Consensus       205 ~-~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~  277 (277)
T 1brt_A          205 W-YTDFRADIPRI-DVPALILHGTGDRTLPIENTARVFHKALPS----AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK  277 (277)
T ss_dssp             T-TCCCTTTGGGC-CSCEEEEEETTCSSSCGGGTHHHHHHHCTT----SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred             H-hccchhhcccC-CCCeEEEecCCCccCChHHHHHHHHHHCCC----CcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence            0 11122456788 99999999999999999988 788777654    489999999999877 888999999999863

>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27

Probab=99.69  E-value=5.1e-16  Score=153.50  Aligned_cols=216  Identities=13%  Similarity=0.026  Sum_probs=138.4

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhh---
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG---  555 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~---  555 (790)
                      +|..+  ..+.|.+       +.|+||++||.++..   ..|.. + ...++++||.|+++|+||++.+........   
T Consensus        11 ~g~~~--~~~~~~~-------~~~~vv~~hG~~~~~---~~~~~-~-~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~   76 (238)
T 1ufo_A           11 AGLSV--LARIPEA-------PKALLLALHGLQGSK---EHILA-L-LPGYAERGFLLLAFDAPRHGEREGPPPSSKSPR   76 (238)
T ss_dssp             TTEEE--EEEEESS-------CCEEEEEECCTTCCH---HHHHH-T-STTTGGGTEEEEECCCTTSTTSSCCCCCTTSTT
T ss_pred             CCEEE--EEEecCC-------CccEEEEECCCcccc---hHHHH-H-HHHHHhCCCEEEEecCCCCccCCCCCCcccccc
Confidence            55443  4556642       568999999998762   22221 2 233445799999999999776432210000   


Q ss_pred             ----hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchh
Q psy463          556 ----YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSE  631 (790)
Q Consensus       556 ----~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~  631 (790)
                          ........++|+.++++++.+ .+   ..+++++|||+||.+++.++.++|. .++++++.++.......     .
T Consensus        77 ~~~~~~~~~~~~~~d~~~~~~~l~~-~~---~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~-----~  146 (238)
T 1ufo_A           77 YVEEVYRVALGFKEEARRVAEEAER-RF---GLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSGFPMKLP-----Q  146 (238)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH-HH---CCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCSSCCCCC-----T
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHh-cc---CCcEEEEEEChHHHHHHHHHHhccC-cceEEEEecCCccchhh-----h
Confidence                000001236677778888776 22   2799999999999999999998884 77777776664321100     0


Q ss_pred             hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh
Q psy463          632 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY  711 (790)
Q Consensus       632 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  711 (790)
                      ..+..                                      +..     ...+....                     
T Consensus       147 ~~~~~--------------------------------------~~~-----~~~~~~~~---------------------  162 (238)
T 1ufo_A          147 GQVVE--------------------------------------DPG-----VLALYQAP---------------------  162 (238)
T ss_dssp             TCCCC--------------------------------------CHH-----HHHHHHSC---------------------
T ss_pred             hhccC--------------------------------------Ccc-----cchhhcCC---------------------
Confidence            00000                                      000     01111111                     


Q ss_pred             hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHH-hcCC-ceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          712 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQ-HADI-MFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       712 ~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~-~~g~-~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                          +...+.++.++|+|+++|++|..+|.+.+..+++.++ +.+. +++++++++++|.+..   +..+.+.+||.++|
T Consensus       163 ----~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~l~~~l  235 (238)
T 1ufo_A          163 ----PATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTP---LMARVGLAFLEHWL  235 (238)
T ss_dssp             ----GGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCH---HHHHHHHHHHHHHH
T ss_pred             ----hhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHH---HHHHHHHHHHHHHH
Confidence                1133445446899999999999999999999999999 8777 7899999999999864   45566677777665

>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}

Probab=99.69  E-value=8e-16  Score=163.91  Aligned_cols=71  Identities=11%  Similarity=0.038  Sum_probs=64.1

Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCC-CCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPD-EEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~-~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      ..+.++ ++|+|+++|++|..+|++.++.+++.++..+..++++++++ +||.... .++++.+.|.+||++++
T Consensus       301 ~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~  373 (377)
T 3i1i_A          301 EALSNV-EANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKV  373 (377)
T ss_dssp             HHHHTC-CSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCC
T ss_pred             HHHhhC-CCCEEEEecCCccccCHHHHHHHHHHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhh
Confidence            567788 99999999999999999999999999987766789999998 9998877 88999999999999765

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.69  E-value=2.4e-15  Score=175.07  Aligned_cols=321  Identities=10%  Similarity=0.032  Sum_probs=187.0

Q ss_pred             CceeEeCCCCCceEEEEecCC------ceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeeccccee
Q psy463           10 SSALWFSPSGNNLAYASFDDN------RTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRA   83 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~   83 (790)
                      ...+.|||||++|||.+...+      ...++++.+.+++.      ....+++ .....+.|+||++.+.+..+.    
T Consensus        62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~------~~~~~l~-~~~~~~~~SPDG~~la~~~~~----  130 (719)
T 1z68_A           62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF------VRGNELP-RPIQYLCWSPVGSKLAYVYQN----  130 (719)
T ss_dssp             CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE------CCSSCCC-SSBCCEEECSSTTCEEEEETT----
T ss_pred             eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc------ccceecC-cccccceECCCCCEEEEEECC----
Confidence            578999999999999987432      46799999988851      0002222 234567899999877776432    


Q ss_pred             EEEEeeCCCCeeeEEEeecCCC-------Ccc------ccCCccccccCCceEEEEeecCCCCC---------CC-----
Q psy463           84 RITRCSINEGTCDVVFSRDLDR-------GWF------EPFDHLRFSSDGKKMLLILSHNQESD---------GS-----  136 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~-------~~~------~~~~~~~~spdg~~i~~~~~~~~~~~---------~~-----  136 (790)
                      .+.+++..++.++.+.......       .|+      .....+.|||||++|+|.+.......         ..     
T Consensus       131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~  210 (719)
T 1z68_A          131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI  210 (719)
T ss_dssp             EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred             eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence            5777888777766543221111       121      11246899999999999875422100         00     


Q ss_pred             ---C--CC--cCCcEEEEEEcCCcCCccCCcceec------cccceEEEEEEeeeccCCccEEEEecccCCCCCCCcccc
Q psy463          137 ---T--PV--DSWDHLTFIDLDDQAGIKDKVPVPL------TRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSW  203 (790)
Q Consensus       137 ---~--~~--g~~~~l~~~~~~~~~~~~~~~~~~l------t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (790)
                         |  .|  .....|+++++++++..   ...++      +.... ...-..|+|++ + +++.......       ..
T Consensus       211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~SpD~-~-~~~~~~~~~~-------~~  277 (719)
T 1z68_A          211 NIPYPKAGAKNPVVRIFIIDTTYPAYV---GPQEVPVPAMIASSDY-YFSWLTWVTDE-R-VCLQWLKRVQ-------NV  277 (719)
T ss_dssp             EEECCBTTSCCCEEEEEEEESSCHHHH---CCEECCCCHHHHTSCE-EEEEEEESSSS-E-EEEEEEESST-------TE
T ss_pred             eecCCCCCCCCCeeEEEEEECCCCCcc---ceeEccCCccCCCCcc-eEEEeEEeCCC-e-EEEEEecccc-------Ce
Confidence               0  00  01237999999887410   00122      22222 33345788884 3 5554322111       12


Q ss_pred             ceeEEEe----cCCcccccCcCCccccccccceeehhhcccCCCCCCCEEE-----EEEEccCCc-EEEEEeccCcceEE
Q psy463          204 DHLTFID----LDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLS-----RVNWANESV-VAAWVNRVQNRARI  273 (790)
Q Consensus       204 ~~l~~~~----~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~-----~~~wspDg~-~~~~~~r~~~~~~i  273 (790)
                      ..||++|    +++|+.      ..++...  ..          .....+.     .+.|||||+ +++......+...|
T Consensus       278 ~~l~~~d~~~~~~~g~~------~~~~~~~--~~----------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l  339 (719)
T 1z68_A          278 SVLSICDFREDWQTWDC------PKTQEHI--EE----------SRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHI  339 (719)
T ss_dssp             EEEEEEEECSSSSSEEC------CGGGEEE--EE----------CSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEE
T ss_pred             EEEEEEcccCCCCCCce------EEEEecc--cc----------cCCceEccccCCccEECCCCCeEEEEEEccCCceEE
Confidence            5799999    887763      2332000  00          1122222     689999999 55545555556789


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      +++++.+++.+.|+..    .|.  ...+.++ ||+.|+|......+..+      ..+||.++++++..    +.+.|+
T Consensus       340 ~~~~~~~~~~~~lt~~----~~~--v~~~~~~-d~~~i~~~~~~~~~~~~------~~~l~~~~~~~g~~----~~~~l~  402 (719)
T 1z68_A          340 HYIKDTVENAIQITSG----KWE--AINIFRV-TQDSLFYSSNEFEEYPG------RRNIYRISIGSYPP----SKKCVT  402 (719)
T ss_dssp             EEESSCSTTCEECSCS----SSC--EEEEEEE-CSSEEEEEESCGGGCTT------CBEEEEEECSSSSC----CEEESS
T ss_pred             EEEECCCCceEecccC----ceE--EEEEEEE-eCCEEEEEEecCCCCCc------eEEEEEEeCCCCCC----Cceecc
Confidence            9999998887666532    121  2246667 99999977651000134      57899999876620    045665


Q ss_pred             C----CCeEEeEEEeeecCCCEEEEEEcC-CCCceEEEEEEEcCC
Q psy463          354 R----GRFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMYRINIAD  393 (790)
Q Consensus       354 ~----~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~  393 (790)
                      .    +...+. .+.|+|||+.+++.... ..|   .++.+++++
T Consensus       403 ~~~~~~~~~~~-~~~~s~dg~~l~~~~s~~~~p---~~~l~d~~~  443 (719)
T 1z68_A          403 CHLRKERCQYY-TASFSDYAKYYALVCYGPGIP---ISTLHDGRT  443 (719)
T ss_dssp             TTTTTTTBCBE-EEEECGGGSSEEEEECCBSSC---EEEEECSSS
T ss_pred             CccCCCCCceE-EEEECCCCCEEEEEcCCCCCC---eEEEEECCC
Confidence            3    222233 37899999999887655 333   466667755

>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*

Probab=99.69  E-value=6.6e-16  Score=160.68  Aligned_cols=199  Identities=14%  Similarity=0.107  Sum_probs=139.3

Q ss_pred             EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc------chHHHHHhcCCeEEEEEcCCCCCCChhhhHhhh
Q psy463          482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV------DWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG  555 (790)
Q Consensus       482 ~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~------~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~  555 (790)
                      .+....+.|.+     . +.|.||++||++..   ...|..      .+...++. +||.|+++|+||+|.++.......
T Consensus        49 ~~~~~~~~p~~-----~-~~~~vvl~HG~g~~---~~~~~~~pdg~~~~~~~l~~-~G~~V~~~D~~G~G~S~~~~~~~~  118 (328)
T 1qlw_A           49 QMYVRYQIPQR-----A-KRYPITLIHGCCLT---GMTWETTPDGRMGWDEYFLR-KGYSTYVIDQSGRGRSATDISAIN  118 (328)
T ss_dssp             CEEEEEEEETT-----C-CSSCEEEECCTTCC---GGGGSSCTTSCCCHHHHHHH-TTCCEEEEECTTSTTSCCCCHHHH
T ss_pred             eEEEEEEccCC-----C-CCccEEEEeCCCCC---CCccccCCCCchHHHHHHHH-CCCeEEEECCCCcccCCCCCcccc
Confidence            45555666753     1 23668999999865   334442      35555554 899999999999877654321110


Q ss_pred             ----------------------------hc-cCCc---------cchhH------------------HHHHHHHHHHhCC
Q psy463          556 ----------------------------YR-RLGT---------VEIYD------------------QINVTRYLQENLP  579 (790)
Q Consensus       556 ----------------------------~~-~~~~---------~~~~D------------------~~~~~~~l~~~~~  579 (790)
                                                  ++ .|..         ..+++                  +.+++..+.++  
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--  196 (328)
T 1qlw_A          119 AVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK--  196 (328)
T ss_dssp             HHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHH--
T ss_pred             cccccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHH--
Confidence                                        00 0000         00122                  55556666653  


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR  659 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  659 (790)
                       +  .+++++||||||.+++.++.++|. .++++++.+|...              .+                      
T Consensus       197 -~--~~~~lvGhS~GG~~a~~~a~~~p~-~v~~~v~~~p~~~--------------~~----------------------  236 (328)
T 1qlw_A          197 -L--DGTVLLSHSQSGIYPFQTAAMNPK-GITAIVSVEPGEC--------------PK----------------------  236 (328)
T ss_dssp             -H--TSEEEEEEGGGTTHHHHHHHHCCT-TEEEEEEESCSCC--------------CC----------------------
T ss_pred             -h--CCceEEEECcccHHHHHHHHhChh-heeEEEEeCCCCC--------------CC----------------------
Confidence             2  389999999999999999998875 8999998887420              00                      


Q ss_pred             CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCccc
Q psy463          660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV  739 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v  739 (790)
                                                     ..                         .....+ ++|+|++||++|..+
T Consensus       237 -------------------------------~~-------------------------~~~~~~-~~PvLii~G~~D~~~  259 (328)
T 1qlw_A          237 -------------------------------PE-------------------------DVKPLT-SIPVLVVFGDHIEEF  259 (328)
T ss_dssp             -------------------------------GG-------------------------GCGGGT-TSCEEEEECSSCTTC
T ss_pred             -------------------------------HH-------------------------HHhhcc-CCCEEEEeccCCccc
Confidence                                           00                         111223 799999999999999


Q ss_pred             ch-----hhhHHHHHHHHhcCCceEEEEcCCCC-----CcCCC--cchHHHHHHHHHHHHhh
Q psy463          740 HF-----QQSMMLAKSLQHADIMFQSQTYPDEE-----HGLIG--VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       740 ~~-----~~~~~l~~~l~~~g~~~~~~~~p~~~-----H~~~~--~~~~~~~~i~~fl~~~l  789 (790)
                      |+     +.++.+++.++++|.+++++++|++|     |.+..  +++++.+.|.+||++++
T Consensus       260 p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~  321 (328)
T 1qlw_A          260 PRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT  321 (328)
T ss_dssp             TTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred             cchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcc
Confidence            97     99999999999998899999999665     98876  47899999999999875

>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}

Probab=99.69  E-value=1.5e-15  Score=153.09  Aligned_cols=254  Identities=17%  Similarity=0.093  Sum_probs=145.3

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++..+.+.      ....|+||++||.+++.   ..|.. +... ++ .+|.|+++|+||+|.+....       
T Consensus        10 ~g~~l~y~~~g~~------~~~~~~vvllHG~~~~~---~~~~~-~~~~-L~-~~~~vi~~D~~G~G~S~~~~-------   70 (266)
T 2xua_A           10 NGTELHYRIDGER------HGNAPWIVLSNSLGTDL---SMWAP-QVAA-LS-KHFRVLRYDTRGHGHSEAPK-------   70 (266)
T ss_dssp             SSSEEEEEEESCS------SSCCCEEEEECCTTCCG---GGGGG-GHHH-HH-TTSEEEEECCTTSTTSCCCS-------
T ss_pred             CCEEEEEEEcCCc------cCCCCeEEEecCccCCH---HHHHH-HHHH-Hh-cCeEEEEecCCCCCCCCCCC-------
Confidence            7888998877442      11247899999987762   34442 2333 44 46999999999988654321       


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                       ....+++..+.+..+++.++   ..++.++||||||.+++.+|.++|+ +++.+++.++....... ..+........ 
T Consensus        71 -~~~~~~~~~~dl~~~l~~l~---~~~~~lvGhS~Gg~va~~~A~~~p~-~v~~lvl~~~~~~~~~~-~~~~~~~~~~~-  143 (266)
T 2xua_A           71 -GPYTIEQLTGDVLGLMDTLK---IARANFCGLSMGGLTGVALAARHAD-RIERVALCNTAARIGSP-EVWVPRAVKAR-  143 (266)
T ss_dssp             -SCCCHHHHHHHHHHHHHHTT---CCSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCSSCSCH-HHHHHHHHHHH-
T ss_pred             -CCCCHHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHHHhChh-hhheeEEecCCCCCCch-HHHHHHHHHHH-
Confidence             12345666666666665433   4689999999999999999999985 89999888875432110 00000000000 


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNN  718 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  718 (790)
                       ..........    ...... .+..     .  .........+...+......    .+      ..............
T Consensus       144 -~~~~~~~~~~----~~~~~~-~~~~-----~--~~~~~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~~~  200 (266)
T 2xua_A          144 -TEGMHALADA----VLPRWF-TADY-----M--EREPVVLAMIRDVFVHTDKE----GY------ASNCEAIDAADLRP  200 (266)
T ss_dssp             -HHCHHHHHHH----HHHHHS-CHHH-----H--HHCHHHHHHHHHHHHTSCHH----HH------HHHHHHHHHCCCGG
T ss_pred             -hcChHHHHHH----HHHHHc-Cccc-----c--cCCHHHHHHHHHHHhhCCHH----HH------HHHHHHHhccCchh
Confidence             0000000000    000000 0000     0  00000001111111111100    00      00000001111225


Q ss_pred             hhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          719 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       719 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .+.++ ++|+|+++|++|..+|++.++.+.+.++.    .++++++ +||.+.. .++++.+.+.+||.+
T Consensus       201 ~l~~i-~~P~lvi~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~  264 (266)
T 2xua_A          201 EAPGI-KVPALVISGTHDLAATPAQGRELAQAIAG----ARYVELD-ASHISNIERADAFTKTVVDFLTE  264 (266)
T ss_dssp             GGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHSTT----CEEEEES-CCSSHHHHTHHHHHHHHHHHHTC
T ss_pred             hhccC-CCCEEEEEcCCCCcCCHHHHHHHHHhCCC----CEEEEec-CCCCchhcCHHHHHHHHHHHHHh
Confidence            57788 99999999999999999998888887764    3889999 9999887 788999999999964

>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12

Probab=99.69  E-value=5.3e-15  Score=149.89  Aligned_cols=261  Identities=12%  Similarity=0.136  Sum_probs=138.5

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA  554 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~  554 (790)
                      ++..+|.++++..+.          ..|.||++||.+++   ...|..  ....+++.||.|+++|+||+|.+...    
T Consensus         3 ~~~~~g~~l~y~~~g----------~g~~vvllHG~~~~---~~~w~~--~~~~l~~~g~~vi~~D~~G~G~S~~~----   63 (274)
T 1a8q_A            3 CTTRDGVEIFYKDWG----------QGRPVVFIHGWPLN---GDAWQD--QLKAVVDAGYRGIAHDRRGHGHSTPV----   63 (274)
T ss_dssp             EECTTSCEEEEEEEC----------SSSEEEEECCTTCC---GGGGHH--HHHHHHHTTCEEEEECCTTSTTSCCC----
T ss_pred             EEccCCCEEEEEecC----------CCceEEEECCCcch---HHHHHH--HHHHHHhCCCeEEEEcCCCCCCCCCC----
Confidence            455688888776541          12579999998876   233432  22344557999999999998865422    


Q ss_pred             hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCCCCcccccccchhhh
Q psy463          555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPVTDWIYYDTIYSERY  633 (790)
Q Consensus       555 ~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~~~~~~~~~~~~~~~  633 (790)
                          .....+.+..+.+..+++.+   +.+++.++||||||.+++.++.++ | ++++++|+.++.............  
T Consensus        64 ----~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~p-~~v~~lvl~~~~~~~~~~~~~~~~--  133 (274)
T 1a8q_A           64 ----WDGYDFDTFADDLNDLLTDL---DLRDVTLVAHSMGGGELARYVGRHGT-GRLRSAVLLSAIPPVMIKSDKNPD--  133 (274)
T ss_dssp             ----SSCCSHHHHHHHHHHHHHHT---TCCSEEEEEETTHHHHHHHHHHHHCS-TTEEEEEEESCCCSCCBCCSSCTT--
T ss_pred             ----CCCCcHHHHHHHHHHHHHHc---CCCceEEEEeCccHHHHHHHHHHhhh-HheeeeeEecCCCccccccccCcc--
Confidence                11234556555565555533   347899999999999998877666 5 489998888864321100000000  


Q ss_pred             cCCCCccCchhhhhhc---cccchhhhccCCcEEEEeec--CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          634 MGLPTFEDNLEGYKIA---ALNNKVDRIRDKQYLLVHGT--MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~---~~~~~~~~~~~~p~l~~~g~--~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                       +.+  ......+...   ........+. .++   .+.  ....+.......+.......... .         .....
T Consensus       134 -~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~  196 (274)
T 1a8q_A          134 -GVP--DEVFDALKNGVLTERSQFWKDTA-EGF---FSANRPGNKVTQGNKDAFWYMAMAQTIE-G---------GVRCV  196 (274)
T ss_dssp             -SBC--HHHHHHHHHHHHHHHHHHHHHHH-HHH---TTTTSTTCCCCHHHHHHHHHHHTTSCHH-H---------HHHHH
T ss_pred             -cch--HHHHHHHHHHhhccHHHHHHHhc-ccc---cccccccccccHHHHHHHHHHhhhcChH-H---------HHHHH
Confidence             000  0000000000   0000000000 000   000  00001100000111000000000 0         00000


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHH-HHHHhcCCceEEEEcCCCCCcCCC---cchHHHHHHHHH
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLA-KSLQHADIMFQSQTYPDEEHGLIG---VRPHFYHTLERF  784 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~-~~l~~~g~~~~~~~~p~~~H~~~~---~~~~~~~~i~~f  784 (790)
                      ..+........+.++ ++|+|+++|++|..+|+....... +.++    .+++++++++||.+..   .++++.+.+.+|
T Consensus       197 ~~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~f  271 (274)
T 1a8q_A          197 DAFGYTDFTEDLKKF-DIPTLVVHGDDDQVVPIDATGRKSAQIIP----NAELKVYEGSSHGIAMVPGDKEKFNRDLLEF  271 (274)
T ss_dssp             HHHHHCCCHHHHTTC-CSCEEEEEETTCSSSCGGGTHHHHHHHST----TCEEEEETTCCTTTTTSTTHHHHHHHHHHHH
T ss_pred             hhhhcCcHHHHhhcC-CCCEEEEecCcCCCCCcHHHHHHHHhhCC----CceEEEECCCCCceecccCCHHHHHHHHHHH
Confidence            001111222556788 999999999999999988655443 3333    3589999999998875   467889999999


Q ss_pred             HH
Q psy463          785 LD  786 (790)
Q Consensus       785 l~  786 (790)
                      |+
T Consensus       272 l~  273 (274)
T 1a8q_A          272 LN  273 (274)
T ss_dssp             HT
T ss_pred             hc
Confidence            85

>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}

Probab=99.69  E-value=2.5e-16  Score=168.10  Aligned_cols=146  Identities=13%  Similarity=0.120  Sum_probs=105.0

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccc-----------ccccccc--chHHHHHhcCCeEE
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQ-----------VTERFSV--DWNLYLADNKDIVV  536 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~-----------~~~~~~~--~~~~~~~~~~G~~v  536 (790)
                      .+.+++.+.+|..+.++++.|.+    ..+++|+||++||+++...           +.+.|..  ......++++||+|
T Consensus        92 ~e~v~~~~~~g~~l~~~l~~P~~----~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~V  167 (398)
T 3nuz_A           92 LEKWEFYPLPKCVSTFLVLIPDN----INKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIA  167 (398)
T ss_dssp             EEEEEECCSTTBCEEEEEEEESS----CCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEE
T ss_pred             EEEEEEEcCCCcEEEEEEEeCCC----CCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEE
Confidence            56678888899999999999985    2467899999999877521           0011110  02334555689999


Q ss_pred             EEEcCCCCCCChhhhHhh----------------hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHH
Q psy463          537 AYIDGRNSALKGNTLKYA----------------GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGL  600 (790)
Q Consensus       537 ~~~d~rG~~~~g~~~~~~----------------~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~  600 (790)
                      +++|+||+|.++......                ....++...+.|+.++++++.+ .+.+|..||+|+||||||++++.
T Consensus       168 l~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~-~~~vd~~rI~v~G~S~GG~~a~~  246 (398)
T 3nuz_A          168 VAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKT-QKHIRKDRIVVSGFSLGTEPMMV  246 (398)
T ss_dssp             EEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTT-CSSEEEEEEEEEEEGGGHHHHHH
T ss_pred             EEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEECHhHHHHHH
Confidence            999999987765332100                0112222345789999999987 77799999999999999999999


Q ss_pred             HHhcCCCCceEEEEEeCCCCCc
Q psy463          601 ALALDPSNVFKCGISVAPVTDW  622 (790)
Q Consensus       601 ~a~~~p~~~~~~~v~~~~~~~~  622 (790)
                      ++...+  +++++++.+++..+
T Consensus       247 ~aa~~~--~i~a~v~~~~~~~~  266 (398)
T 3nuz_A          247 LGTLDT--SIYAFVYNDFLCQT  266 (398)
T ss_dssp             HHHHCT--TCCEEEEESCBCCH
T ss_pred             HHhcCC--cEEEEEEecccccc
Confidence            888654  78888887776543

>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A

Probab=99.69  E-value=5.4e-16  Score=156.43  Aligned_cols=247  Identities=13%  Similarity=0.024  Sum_probs=141.2

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      +.|+||++||.++..   ..|..  ....+++ ||.|+++|+||+|.+....    ........+++..+.+..+++.. 
T Consensus        19 ~~p~vv~~HG~~~~~---~~~~~--~~~~l~~-g~~v~~~D~~G~G~S~~~~----~~~~~~~~~~~~~~~~~~~~~~~-   87 (269)
T 4dnp_A           19 GERVLVLAHGFGTDQ---SAWNR--ILPFFLR-DYRVVLYDLVCAGSVNPDF----FDFRRYTTLDPYVDDLLHILDAL-   87 (269)
T ss_dssp             CSSEEEEECCTTCCG---GGGTT--TGGGGTT-TCEEEEECCTTSTTSCGGG----CCTTTCSSSHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEEeCCCCcH---HHHHH--HHHHHhC-CcEEEEEcCCCCCCCCCCC----CCccccCcHHHHHHHHHHHHHhc-
Confidence            458999999988763   33332  2234554 9999999999987764310    01111235667776666666643 


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhh-h--hccccchhh
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGY-K--IAALNNKVD  656 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~--~~~~~~~~~  656 (790)
                        +.++++|+||||||.+++.++.++|. .++++++.+|......... +..   +..  ....... .  .........
T Consensus        88 --~~~~~~l~GhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~-~~~---~~~--~~~~~~~~~~~~~~~~~~~~  158 (269)
T 4dnp_A           88 --GIDCCAYVGHSVSAMIGILASIRRPE-LFSKLILIGASPRFLNDED-YHG---GFE--QGEIEKVFSAMEANYEAWVN  158 (269)
T ss_dssp             --TCCSEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCCSCCBCBTT-BCC---SBC--HHHHHHHHHHHHHCHHHHHH
T ss_pred             --CCCeEEEEccCHHHHHHHHHHHhCcH-hhceeEEeCCCCCCCChHH-hcc---ccc--hHHHHHHHHhccccHHHHHH
Confidence              35699999999999999999999885 8999999988654321100 000   000  0000000 0  000000000


Q ss_pred             hccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCC
Q psy463          657 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMD  736 (790)
Q Consensus       657 ~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D  736 (790)
                      .+.  +.  ..+.    ........+.+.+.........          ..............+.++ ++|+|+++|++|
T Consensus       159 ~~~--~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D  219 (269)
T 4dnp_A          159 GFA--PL--AVGA----DVPAAVREFSRTLFNMRPDITL----------FVSRTVFNSDMRGVLGLV-KVPCHIFQTARD  219 (269)
T ss_dssp             HHH--HH--HHCS----SCHHHHHHHHHHHHHSCHHHHH----------HHHHHHHTCCCGGGGGGC-CSCEEEEEEESB
T ss_pred             Hhh--hh--hccC----CChhHHHHHHHHHHccCcchhh----------hHhhhhcchhhHhhhccc-cCCEEEEecCCC
Confidence            000  00  0000    0001111122222211111000          000000111222567788 999999999999


Q ss_pred             cccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          737 DNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       737 ~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ..+|++.+..+.+.++..   ++++++|+++|.+.. .++++.+.|.+||+++
T Consensus       220 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~  269 (269)
T 4dnp_A          220 HSVPASVATYLKNHLGGK---NTVHWLNIEGHLPHLSAPTLLAQELRRALSHR  269 (269)
T ss_dssp             TTBCHHHHHHHHHHSSSC---EEEEEEEEESSCHHHHCHHHHHHHHHHHHC--
T ss_pred             cccCHHHHHHHHHhCCCC---ceEEEeCCCCCCccccCHHHHHHHHHHHHhhC
Confidence            999999999888877542   689999999999877 8889999999999753

>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}

Probab=99.69  E-value=2.1e-15  Score=151.48  Aligned_cols=256  Identities=14%  Similarity=0.014  Sum_probs=144.9

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      .+...+|.++++....          ..|+||++||++++.   ..|.  .....++ .||.|+++|+||+|.+...-  
T Consensus         6 ~~~~~~g~~l~~~~~g----------~~~~vv~lHG~~~~~---~~~~--~~~~~l~-~~~~vi~~d~~G~G~S~~~~--   67 (262)
T 3r0v_A            6 TVPSSDGTPIAFERSG----------SGPPVVLVGGALSTR---AGGA--PLAERLA-PHFTVICYDRRGRGDSGDTP--   67 (262)
T ss_dssp             EEECTTSCEEEEEEEE----------CSSEEEEECCTTCCG---GGGH--HHHHHHT-TTSEEEEECCTTSTTCCCCS--
T ss_pred             eEEcCCCcEEEEEEcC----------CCCcEEEECCCCcCh---HHHH--HHHHHHh-cCcEEEEEecCCCcCCCCCC--
Confidence            3455689888877652          136799999988773   3332  2334455 79999999999987654320  


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhh
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERY  633 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~  633 (790)
                             ...+++..+.+..+++.+   + .+++++|||+||.+++.++.++|  +++++++.+|..............+
T Consensus        68 -------~~~~~~~~~~~~~~~~~l---~-~~~~l~G~S~Gg~ia~~~a~~~p--~v~~lvl~~~~~~~~~~~~~~~~~~  134 (262)
T 3r0v_A           68 -------PYAVEREIEDLAAIIDAA---G-GAAFVFGMSSGAGLSLLAAASGL--PITRLAVFEPPYAVDDSRPPVPPDY  134 (262)
T ss_dssp             -------SCCHHHHHHHHHHHHHHT---T-SCEEEEEETHHHHHHHHHHHTTC--CEEEEEEECCCCCCSTTSCCCCTTH
T ss_pred             -------CCCHHHHHHHHHHHHHhc---C-CCeEEEEEcHHHHHHHHHHHhCC--CcceEEEEcCCcccccccchhhhHH
Confidence                   245677777677776643   3 79999999999999999999887  7898898888654322110000000


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc-chhhh
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN-LEGYK  712 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~  712 (790)
                      +     ..................+..       .  -...+.    ...+.+.............  ..+... .....
T Consensus       135 ~-----~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  194 (262)
T 3r0v_A          135 Q-----TRLDALLAEGRRGDAVTYFMT-------E--GVGVPP----DLVAQMQQAPMWPGMEAVA--HTLPYDHAVMGD  194 (262)
T ss_dssp             H-----HHHHHHHHTTCHHHHHHHHHH-------H--TSCCCH----HHHHHHHTSTTHHHHHHTG--GGHHHHHHHHTT
T ss_pred             H-----HHHHHHhhccchhhHHHHHhh-------c--ccCCCH----HHHHHHHhhhcccchHHHH--hhhhhhhhhhhc
Confidence            0     000000000000000000000       0  000000    0111111000000000000  000000 00000


Q ss_pred             hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHH
Q psy463          713 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDS  787 (790)
Q Consensus       713 ~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~  787 (790)
                      .......+.++ ++|+|+++|++|..+|++.+..+.+.++.    +++++++++||..  +++++.+.+.+||++
T Consensus       195 ~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~--~p~~~~~~i~~fl~~  262 (262)
T 3r0v_A          195 NTIPTARFASI-SIPTLVMDGGASPAWIRHTAQELADTIPN----ARYVTLENQTHTV--APDAIAPVLVEFFTR  262 (262)
T ss_dssp             SCCCHHHHTTC-CSCEEEEECTTCCHHHHHHHHHHHHHSTT----EEEEECCCSSSSC--CHHHHHHHHHHHHC-
T ss_pred             CCCCHHHcCcC-CCCEEEEeecCCCCCCHHHHHHHHHhCCC----CeEEEecCCCccc--CHHHHHHHHHHHHhC
Confidence            01123567788 99999999999999999999988887754    4899999999943  688999999999863

>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14

Probab=99.68  E-value=1.1e-15  Score=150.09  Aligned_cols=185  Identities=14%  Similarity=0.104  Sum_probs=131.8

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEE--cCCCCCCChhhhHhhhhccCC----ccchhHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYI--DGRNSALKGNTLKYAGYRRLG----TVEIYDQINVTR  572 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~--d~rG~~~~g~~~~~~~~~~~~----~~~~~D~~~~~~  572 (790)
                      ++.|+||++||+++..   ..|.  .....+++ ||.|+++  |.+|.+.+... .......+.    ...+.++.+.++
T Consensus        36 ~~~~~vv~~HG~~~~~---~~~~--~~~~~l~~-g~~v~~~~~d~~g~g~s~~~-~~~~~~~~~~~~~~~~~~~~~~~l~  108 (226)
T 2h1i_A           36 TSKPVLLLLHGTGGNE---LDLL--PLAEIVDS-EASVLSVRGNVLENGMPRFF-RRLAEGIFDEEDLIFRTKELNEFLD  108 (226)
T ss_dssp             TTSCEEEEECCTTCCT---TTTH--HHHHHHHT-TSCEEEECCSEEETTEEESS-CEEETTEECHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEEecCCCCh---hHHH--HHHHHhcc-CceEEEecCcccCCcchhhc-cccCccCcChhhHHHHHHHHHHHHH
Confidence            4679999999998763   2332  22344554 9999999  77776643210 000000000    122445556666


Q ss_pred             HHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhcccc
Q psy463          573 YLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALN  652 (790)
Q Consensus       573 ~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  652 (790)
                      ++.+..+ ++..+++++|||+||.+++.++.++|. .++++++.+|......                            
T Consensus       109 ~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~~v~~~~~~~~~~----------------------------  158 (226)
T 2h1i_A          109 EAAKEYK-FDRNNIVAIGYSNGANIAASLLFHYEN-ALKGAVLHHPMVPRRG----------------------------  158 (226)
T ss_dssp             HHHHHTT-CCTTCEEEEEETHHHHHHHHHHHHCTT-SCSEEEEESCCCSCSS----------------------------
T ss_pred             HHHhhcC-CCcccEEEEEEChHHHHHHHHHHhChh-hhCEEEEeCCCCCcCc----------------------------
Confidence            6666343 678899999999999999999998875 7999999988643210                            


Q ss_pred             chhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEe
Q psy463          653 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH  732 (790)
Q Consensus       653 ~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~  732 (790)
                                                             .                         .....+ ++|+|+++
T Consensus       159 ---------------------------------------~-------------------------~~~~~~-~~p~l~~~  173 (226)
T 2h1i_A          159 ---------------------------------------M-------------------------QLANLA-GKSVFIAA  173 (226)
T ss_dssp             ---------------------------------------C-------------------------CCCCCT-TCEEEEEE
T ss_pred             ---------------------------------------c-------------------------cccccc-CCcEEEEe
Confidence                                                   0                         001123 78999999


Q ss_pred             cCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          733 GTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       733 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      |++|..++.+.+..+++.+++.+.++++ ++|+++|.+.   .+..+.+.+||.++|
T Consensus       174 G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~---~~~~~~~~~~l~~~l  226 (226)
T 2h1i_A          174 GTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLT---MGEVEKAKEWYDKAF  226 (226)
T ss_dssp             ESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCC---HHHHHHHHHHHHHHC
T ss_pred             CCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC---HHHHHHHHHHHHHhC
Confidence            9999999999999999999998888888 9999999884   466788999998875

>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}

Probab=99.68  E-value=6.5e-16  Score=156.62  Aligned_cols=255  Identities=12%  Similarity=0.064  Sum_probs=146.2

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++...        +  ..|+||++||++++.   ..|..  ....+++ ||.|+++|+||+|.+....      .
T Consensus        11 ~~~~~~y~~~--------g--~~~~vv~~HG~~~~~---~~~~~--~~~~L~~-~~~vi~~d~~G~G~s~~~~------~   68 (278)
T 3oos_A           11 PRGKFEYFLK--------G--EGPPLCVTHLYSEYN---DNGNT--FANPFTD-HYSVYLVNLKGCGNSDSAK------N   68 (278)
T ss_dssp             TTEEEEEEEE--------C--SSSEEEECCSSEECC---TTCCT--TTGGGGG-TSEEEEECCTTSTTSCCCS------S
T ss_pred             CCceEEEEec--------C--CCCeEEEEcCCCcch---HHHHH--HHHHhhc-CceEEEEcCCCCCCCCCCC------C
Confidence            6667776543        1  236899999988763   23332  2234553 9999999999987654321      0


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                      .....++++.+.+..+++..   +.++++++|||+||.+++.++.++|+ +++++++.+|.........  ........ 
T Consensus        69 ~~~~~~~~~~~~~~~~~~~l---~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~~--~~~~~~~~-  141 (278)
T 3oos_A           69 DSEYSMTETIKDLEAIREAL---YINKWGFAGHSAGGMLALVYATEAQE-SLTKIIVGGAAASKEYASH--KDSIYCSK-  141 (278)
T ss_dssp             GGGGSHHHHHHHHHHHHHHT---TCSCEEEEEETHHHHHHHHHHHHHGG-GEEEEEEESCCSBGGGGGS--TTSTTSTT-
T ss_pred             cccCcHHHHHHHHHHHHHHh---CCCeEEEEeecccHHHHHHHHHhCch-hhCeEEEecCccccccccc--cchhhhhh-
Confidence            11234667776676666643   34689999999999999999998885 8999999998766221100  00000000 


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHh---cCcchhcccccCCCCcC----Ccchhh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQH---ADIMFQSQRYMGLPTFE----DNLEGY  711 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~----~~~~~~  711 (790)
                       ........     .....+..           ..........+......   .... ....+...+...    .....+
T Consensus       142 -~~~~~~~~-----~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  203 (278)
T 3oos_A          142 -NVKFNRIV-----SIMNALND-----------DSTVQEERKALSREWALMSFYSEE-KLEEALKLPNSGKTVGNRLNYF  203 (278)
T ss_dssp             -STTHHHHH-----HHHHHHTC-----------TTSCHHHHHHHHHHHHHHHCSCHH-HHHHHTTSCCCCEECHHHHHHH
T ss_pred             -chhHHHHH-----HHHHhhcc-----------cccCchHHHHHHHHHhhcccCCcH-HHHHHhhccccchhHHHHHHHh
Confidence             00000000     00011100           00000111111111000   0000 000111111100    001111


Q ss_pred             -----hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463          712 -----KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL  785 (790)
Q Consensus       712 -----~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl  785 (790)
                           ...+....+.++ ++|+|+++|++|..+|++.+..+.+.++.    ++++++++++|.+.. +++++.+.|.+||
T Consensus       204 ~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~p~~~~~~i~~fl  278 (278)
T 3oos_A          204 RQVEYKDYDVRQKLKFV-KIPSFIYCGKHDVQCPYIFSCEIANLIPN----ATLTKFEESNHNPFVEEIDKFNQFVNDTL  278 (278)
T ss_dssp             HHTTGGGCBCHHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHSTT----EEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred             hhcccccccHHHHHhCC-CCCEEEEEeccCCCCCHHHHHHHHhhCCC----cEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence                 122334567788 99999999999999999999998887753    599999999999887 8888888888875

>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}

Probab=99.68  E-value=5.9e-16  Score=153.43  Aligned_cols=196  Identities=15%  Similarity=0.092  Sum_probs=130.0

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHh----cCCeEEEEEcCCCCCC------ChhhhHh-hhh---ccCCccc
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD----NKDIVVAYIDGRNSAL------KGNTLKY-AGY---RRLGTVE  563 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~----~~G~~v~~~d~rG~~~------~g~~~~~-~~~---~~~~~~~  563 (790)
                      .++.|+||++||.++..   ..|. .+...+..    ..|+.|+++|.++.+.      .+..|.. ...   .......
T Consensus        20 ~~~~p~vv~lHG~g~~~---~~~~-~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~   95 (239)
T 3u0v_A           20 GRHSASLIFLHGSGDSG---QGLR-MWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLES   95 (239)
T ss_dssp             SCCCEEEEEECCTTCCH---HHHH-HHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHH
T ss_pred             CCCCcEEEEEecCCCch---hhHH-HHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhh
Confidence            45679999999987762   2222 23333332    2479999999864321      0110000 000   0000113


Q ss_pred             hhHHHHHHHHHHHh--CCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccC
Q psy463          564 IYDQINVTRYLQEN--LPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFED  641 (790)
Q Consensus       564 ~~D~~~~~~~l~~~--~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~  641 (790)
                      ++++.+.+..+++.  ...++.++++|+||||||.+++.++.++|. .++++++.+|......                 
T Consensus        96 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~-~~~~~v~~~~~~~~~~-----------------  157 (239)
T 3u0v_A           96 IDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQ-DVAGVFALSSFLNKAS-----------------  157 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCT-TSSEEEEESCCCCTTC-----------------
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCcc-ccceEEEecCCCCchh-----------------
Confidence            34444444444331  123678999999999999999999998875 8899998888643210                 


Q ss_pred             chhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhh
Q psy463          642 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVD  721 (790)
Q Consensus       642 ~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  721 (790)
                        ..+.                                     .                                ....
T Consensus       158 --~~~~-------------------------------------~--------------------------------~~~~  166 (239)
T 3u0v_A          158 --AVYQ-------------------------------------A--------------------------------LQKS  166 (239)
T ss_dssp             --HHHH-------------------------------------H--------------------------------HHHC
T ss_pred             --HHHH-------------------------------------H--------------------------------HHhh
Confidence              0000                                     0                                0011


Q ss_pred             ccCCcc-EEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          722 RIRDKQ-YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       722 ~i~~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      .. .+| +|++||++|..+|.+.++.+++.+++.+.++++.++|+++|.+.   .+..+.+.+||+++|.
T Consensus       167 ~~-~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~  232 (239)
T 3u0v_A          167 NG-VLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS---KTELDILKLWILTKLP  232 (239)
T ss_dssp             CS-CCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---HHHHHHHHHHHHHHCC
T ss_pred             cc-CCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC---HHHHHHHHHHHHHhCC
Confidence            22 566 99999999999999999999999999999999999999999986   4668889999998763

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.68  E-value=1.4e-14  Score=148.24  Aligned_cols=266  Identities=14%  Similarity=0.101  Sum_probs=172.0

Q ss_pred             eeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCC-cCCccCCc
Q psy463           82 RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD-QAGIKDKV  160 (790)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~-~~~~~~~~  160 (790)
                      ...+.+++..+++...+.....      ....+.|||||+.|++..              ...|+++++++ ++      
T Consensus        21 ~~~i~~~d~~~~~~~~~~~~~~------~v~~~~~spdg~~l~~~~--------------~~~i~~~d~~~~~~------   74 (297)
T 2ojh_A           21 RSSIEIFNIRTRKMRVVWQTPE------LFEAPNWSPDGKYLLLNS--------------EGLLYRLSLAGDPS------   74 (297)
T ss_dssp             CEEEEEEETTTTEEEEEEEESS------CCEEEEECTTSSEEEEEE--------------TTEEEEEESSSCCS------
T ss_pred             ceeEEEEeCCCCceeeeccCCc------ceEeeEECCCCCEEEEEc--------------CCeEEEEeCCCCCC------
Confidence            3455566666666554443311      123579999999999854              12899999988 64      


Q ss_pred             ceeccccc-eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcc
Q psy463          161 PVPLTRGR-FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWD  239 (790)
Q Consensus       161 ~~~lt~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~  239 (790)
                      ...+..+. .....-..|+++++. +++......        ....||.+++.+++      ...++             
T Consensus        75 ~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~--------~~~~l~~~~~~~~~------~~~~~-------------  126 (297)
T 2ojh_A           75 PEKVDTGFATICNNDHGISPDGAL-YAISDKVEF--------GKSAIYLLPSTGGT------PRLMT-------------  126 (297)
T ss_dssp             CEECCCTTCCCBCSCCEECTTSSE-EEEEECTTT--------SSCEEEEEETTCCC------CEECC-------------
T ss_pred             ceEeccccccccccceEECCCCCE-EEEEEeCCC--------CcceEEEEECCCCc------eEEee-------------
Confidence            23333222 122223577777663 444432111        23699999998876      33333             


Q ss_pred             cCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463          240 EKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ  319 (790)
Q Consensus       240 ~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~  319 (790)
                          ... ....+.|||||+.++++........|+.++..+++...+.....      ....+.|+|||+.|++...   
T Consensus       127 ----~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~---  192 (297)
T 2ojh_A          127 ----KNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG------RNDGPDYSPDGRWIYFNSS---  192 (297)
T ss_dssp             ----SSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS------CEEEEEECTTSSEEEEEEC---
T ss_pred             ----cCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC------ccccceECCCCCEEEEEec---
Confidence                222 26678999999966654443445679999998887765543221      1347899999999886543   


Q ss_pred             ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCC------ceEEEEEEEcCC
Q psy463          320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSP------IVQHMYRINIAD  393 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~------~~~~l~~~~~~~  393 (790)
                       .++      ...||.+++.+++      ...++.....+.. +.|+|||+.|++.+..+..      ....|+.+++.+
T Consensus       193 -~~~------~~~i~~~~~~~~~------~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~  258 (297)
T 2ojh_A          193 -RTG------QMQIWRVRVDGSS------VERITDSAYGDWF-PHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG  258 (297)
T ss_dssp             -TTS------SCEEEEEETTSSC------EEECCCCSEEEEE-EEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred             -CCC------CccEEEECCCCCC------cEEEecCCcccCC-eEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence             445      5689999987776      7777766655444 8999999999998876321      237899999987


Q ss_pred             CCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463          394 PTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG  435 (790)
Q Consensus       394 ~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~  435 (790)
                        ++.+.+...    .+....+..+.|||||++|++......
T Consensus       259 --~~~~~~~~~----~~~~~~~~~~~~spdg~~l~~~~~~~~  294 (297)
T 2ojh_A          259 --GNVETLFDL----FGGQGTMNSPNWSPDGDEFAYVRYFPV  294 (297)
T ss_dssp             --CSCEEEEEE----EESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred             --CCceeeecc----CCCCcccccceECCCCCEEEEEEeccC
Confidence              565555431    002345566889999999988876554

>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}

Probab=99.68  E-value=2.2e-15  Score=152.51  Aligned_cols=257  Identities=11%  Similarity=0.121  Sum_probs=142.2

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA  554 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~  554 (790)
                      +...+|..+.  +|.|.     . .+.|+||++|||++...-...+.. ....++++.||.|+.+|||+.+...  +.  
T Consensus         9 ~~~~~~~~~~--~y~p~-----~-~~~p~iv~~HGGg~~~g~~~~~~~-~~~~~l~~~g~~Vi~vdYrlaPe~~--~p--   75 (274)
T 2qru_A            9 QTLANGATVT--IYPTT-----T-EPTNYVVYLHGGGMIYGTKSDLPE-ELKELFTSNGYTVLALDYLLAPNTK--ID--   75 (274)
T ss_dssp             EECTTSCEEE--EECCS-----S-SSCEEEEEECCSTTTSCCGGGCCH-HHHHHHHTTTEEEEEECCCCTTTSC--HH--
T ss_pred             ccccCCeeEE--EEcCC-----C-CCCcEEEEEeCccccCCChhhchH-HHHHHHHHCCCEEEEeCCCCCCCCC--Cc--
Confidence            4444666554  56664     2 457999999999864322233322 2344556689999999999977543  22  


Q ss_pred             hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh---cCCCCceEEEEEeCCCCCcccccccchh
Q psy463          555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA---LDPSNVFKCGISVAPVTDWIYYDTIYSE  631 (790)
Q Consensus       555 ~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~---~~p~~~~~~~v~~~~~~~~~~~~~~~~~  631 (790)
                             ..++|+.++++|+.++..  +.++|+|+|+|+||.+|+.++.   ..+ ..+++++..+|+.+........  
T Consensus        76 -------~~~~D~~~al~~l~~~~~--~~~~i~l~G~SaGG~lA~~~a~~~~~~~-~~~~~~vl~~~~~~~~~~~~~~--  143 (274)
T 2qru_A           76 -------HILRTLTETFQLLNEEII--QNQSFGLCGRSAGGYLMLQLTKQLQTLN-LTPQFLVNFYGYTDLEFIKEPR--  143 (274)
T ss_dssp             -------HHHHHHHHHHHHHHHHTT--TTCCEEEEEETHHHHHHHHHHHHHHHTT-CCCSCEEEESCCSCSGGGGSCC--
T ss_pred             -------HHHHHHHHHHHHHHhccc--cCCcEEEEEECHHHHHHHHHHHHHhcCC-CCceEEEEEcccccccccCCch--
Confidence                   348999999999987532  2689999999999999999887   234 3677888888876622110000  


Q ss_pred             hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh
Q psy463          632 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY  711 (790)
Q Consensus       632 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  711 (790)
                       ....+  ..........  . .......       .....+  ..  ..+..  ...... .  .+........    .
T Consensus       144 -~~~~~--~~~~~~~~~~--~-~~~~~~~-------~~~~~~--~~--~~~~~--~~~~~~-~--~~~~~~~~~~----~  197 (274)
T 2qru_A          144 -KLLKQ--AISAKEIAAI--D-QTKPVWD-------DPFLSR--YL--LYHYS--IQQALL-P--HFYGLPENGD----W  197 (274)
T ss_dssp             -CSCSS--CCCSGGGTTS--C-CSSCCSC-------CTTCTT--HH--HHHHH--HHTTCH-H--HHHTCCTTSC----C
T ss_pred             -hhccc--cccHHHHhhh--c-ccCCCCC-------Cccccc--hh--hhhhh--hhhcch-h--hccCcccccc----c
Confidence             00000  0000000000  0 0000000       000000  00  00000  000000 0  0000000000    0


Q ss_pred             hhhhhh-hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----cchHHHHHHHHHH
Q psy463          712 KIAALN-NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----VRPHFYHTLERFL  785 (790)
Q Consensus       712 ~~~~~~-~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----~~~~~~~~i~~fl  785 (790)
                      ....+. ..+.++  +|+||++|+.|..++...++.+.+++.    +++++++++++|++..     ...++.+.+.+||
T Consensus       198 ~~~~~~~~~l~~l--pP~li~~G~~D~~~~~~~~~~l~~~~~----~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl  271 (274)
T 2qru_A          198 SAYALSDETLKTF--PPCFSTASSSDEEVPFRYSKKIGRTIP----ESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWL  271 (274)
T ss_dssp             GGGCCCHHHHHTS--CCEEEEEETTCSSSCTHHHHHHHHHST----TCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCChhhhcCC--CCEEEEEecCCCCcCHHHHHHHHHhCC----CcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHH
Confidence            000000 233444  799999999999998888777776554    5699999999999864     2336688899999


Q ss_pred             HHh
Q psy463          786 DSC  788 (790)
Q Consensus       786 ~~~  788 (790)
                      +++
T Consensus       272 ~~~  274 (274)
T 2qru_A          272 KER  274 (274)
T ss_dssp             HTC
T ss_pred             hhC
Confidence            764

>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A

Probab=99.68  E-value=1.8e-15  Score=164.57  Aligned_cols=266  Identities=12%  Similarity=0.105  Sum_probs=148.4

Q ss_pred             EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH
Q psy463          473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK  552 (790)
Q Consensus       473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~  552 (790)
                      +.+...+|..+++...        +  ..|+||++||+++..   ..|. .+... ++++||.|+++|+||+|.+.... 
T Consensus         6 ~~~~~~dG~~l~y~~~--------G--~gp~VV~lHG~~~~~---~~~~-~l~~~-La~~Gy~Vi~~D~rG~G~S~~~~-   69 (456)
T 3vdx_A            6 VGQENSTSIDLYYEDH--------G--TGVPVVLIHGFPLSG---HSWE-RQSAA-LLDAGYRVITYDRRGFGQSSQPT-   69 (456)
T ss_dssp             EEEETTEEEEEEEEEE--------S--SSEEEEEECCTTCCG---GGGT-THHHH-HHHHTEEEEEECCTTSTTSCCCS-
T ss_pred             ecccccCCeEEEEEEe--------C--CCCEEEEECCCCCcH---HHHH-HHHHH-HHHCCcEEEEECCCCCCCCCCCC-
Confidence            3445567888876544        1  338899999998763   3343 23334 43479999999999987654321 


Q ss_pred             hhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhh
Q psy463          553 YAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSER  632 (790)
Q Consensus       553 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~  632 (790)
                             ....+.+..+.+..+++.   ++.++++|+||||||.+++.++.+++++.++++++.+|..............
T Consensus        70 -------~~~s~~~~a~dl~~~l~~---l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~  139 (456)
T 3vdx_A           70 -------TGYDYDTFAADLNTVLET---LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDG  139 (456)
T ss_dssp             -------SCCSHHHHHHHHHHHHHH---HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSC
T ss_pred             -------CCCCHHHHHHHHHHHHHH---hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccc
Confidence                   123455555555555542   3457999999999999998888877445899999999876532211000000


Q ss_pred             hcCCCCccCchhhhhhc---cc----cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463          633 YMGLPTFEDNLEGYKIA---AL----NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE  705 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~---~~----~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  705 (790)
                      ..  +  ......+...   ..    ......+....     ...............................       
T Consensus       140 ~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  203 (456)
T 3vdx_A          140 AA--P--QEFFDGIVAAVKADRYAFYTGFFNDFYNLD-----ENLGTRISEEAVRNSWNTAASGGFFAAAAAP-------  203 (456)
T ss_dssp             SB--C--HHHHHHHHHHHHHCHHHHHHHHHHHHTTTT-----TSBTTTBCHHHHHHHHHHHHTSCTTHHHHGG-------
T ss_pred             cc--h--HHHHHHHHHhhhccchHHHHHHHHHHhccc-----ccccccccHHHHHHHhhhccccchhhhhhhh-------
Confidence            00  0  0000000000   00    00000000000     0000011111111111111111111000000       


Q ss_pred             CcchhhhhhhhhhhhhccCCccEEEEecCCCcccchh-hhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHH
Q psy463          706 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLER  783 (790)
Q Consensus       706 ~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~  783 (790)
                         ..+ .......+.++ ++|+|+++|+.|..+|++ ....+.+.++    .++++++|+++|.+.. .++.+.+.+.+
T Consensus       204 ---~~~-~~d~~~~l~~i-~~PvLiI~G~~D~~vp~~~~~~~l~~~~~----~~~~~~i~gagH~~~~e~p~~v~~~I~~  274 (456)
T 3vdx_A          204 ---TTW-YTDFRADIPRI-DVPALILHGTGDRTLPIENTARVFHKALP----SAEYVEVEGAPHGLLWTHAEEVNTALLA  274 (456)
T ss_dssp             ---GGT-TCCCTTTSTTC-CSCCEEEEETTCSSSCGGGTHHHHHHHCT----TSEEEEETTCCSCTTTTTHHHHHHHHHH
T ss_pred             ---hhh-hhhHHHHhhhC-CCCEEEEEeCCCCCcCHHHHHHHHHHHCC----CceEEEeCCCCCcchhhCHHHHHHHHHH
Confidence               000 11222456778 999999999999999998 4455544433    3599999999999887 88999999999


Q ss_pred             HHHHhh
Q psy463          784 FLDSCF  789 (790)
Q Consensus       784 fl~~~l  789 (790)
                      ||++++
T Consensus       275 FL~~~l  280 (456)
T 3vdx_A          275 FLAKAL  280 (456)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            999875

>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14

Probab=99.68  E-value=3.2e-16  Score=153.47  Aligned_cols=199  Identities=12%  Similarity=0.065  Sum_probs=133.8

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhh-hc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG-YR  557 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~-~~  557 (790)
                      ++..+.+.++.|..      ...|+||++||.++..   ..|.  .....++ .||.|+++|.++....+..+.... ..
T Consensus        14 ~~~~l~~~~~~~~~------~~~p~vv~lHG~g~~~---~~~~--~~~~~l~-~~~~vv~~d~~~~~~~g~~~~~~~~~~   81 (223)
T 3b5e_A           14 TDLAFPYRLLGAGK------ESRECLFLLHGSGVDE---TTLV--PLARRIA-PTATLVAARGRIPQEDGFRWFERIDPT   81 (223)
T ss_dssp             CSSSSCEEEESTTS------SCCCEEEEECCTTBCT---TTTH--HHHHHHC-TTSEEEEECCSEEETTEEESSCEEETT
T ss_pred             cCCCceEEEeCCCC------CCCCEEEEEecCCCCH---HHHH--HHHHhcC-CCceEEEeCCCCCcCCccccccccCCC
Confidence            34556666554532      2348999999988763   2332  1233444 499999999876321111110000 00


Q ss_pred             cC----CccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhh
Q psy463          558 RL----GTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERY  633 (790)
Q Consensus       558 ~~----~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~  633 (790)
                      ..    .....+++.+.++++.++++ ++.++++|+|||+||.+++.++.++|. .++++++.+|......         
T Consensus        82 ~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~~v~~~~~~~~~~---------  150 (223)
T 3b5e_A           82 RFEQKSILAETAAFAAFTNEAAKRHG-LNLDHATFLGYSNGANLVSSLMLLHPG-IVRLAALLRPMPVLDH---------  150 (223)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHHHHHT-CCGGGEEEEEETHHHHHHHHHHHHSTT-SCSEEEEESCCCCCSS---------
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEECcHHHHHHHHHHhCcc-ccceEEEecCccCccc---------
Confidence            00    01234566666666665333 678899999999999999999998875 7889998888532100         


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhh
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKI  713 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  713 (790)
                                                                              .                       
T Consensus       151 --------------------------------------------------------~-----------------------  151 (223)
T 3b5e_A          151 --------------------------------------------------------V-----------------------  151 (223)
T ss_dssp             --------------------------------------------------------C-----------------------
T ss_pred             --------------------------------------------------------c-----------------------
Confidence                                                                    0                       


Q ss_pred             hhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          714 AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       714 ~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                          .....+ ++|+|++||++|..+|.+.++ +++.+++.+.+++++++| ++|.+..   +..+.+.+||++.+
T Consensus       152 ----~~~~~~-~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~---~~~~~i~~~l~~~~  217 (223)
T 3b5e_A          152 ----PATDLA-GIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGD---PDAAIVRQWLAGPI  217 (223)
T ss_dssp             ----CCCCCT-TCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCH---HHHHHHHHHHHCC-
T ss_pred             ----cccccc-CCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCH---HHHHHHHHHHHhhh
Confidence                001123 789999999999999999999 999999999999999999 9999853   34578899998654

>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}

Probab=99.67  E-value=7.6e-16  Score=156.68  Aligned_cols=264  Identities=10%  Similarity=0.002  Sum_probs=147.4

Q ss_pred             EEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhh
Q psy463          472 YMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTL  551 (790)
Q Consensus       472 ~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~  551 (790)
                      ...+.. +|.++++..+.+.        ..|+||++||++++.   ..|. .+. ..++++||.|+++|+||.|.+....
T Consensus         6 ~~~~~~-~g~~l~~~~~g~~--------~~~~vv~~hG~~~~~---~~~~-~~~-~~l~~~G~~v~~~d~~G~G~s~~~~   71 (286)
T 3qit_A            6 EKFLEF-GGNQICLCSWGSP--------EHPVVLCIHGILEQG---LAWQ-EVA-LPLAAQGYRVVAPDLFGHGRSSHLE   71 (286)
T ss_dssp             EEEEEE-TTEEEEEEEESCT--------TSCEEEEECCTTCCG---GGGH-HHH-HHHHHTTCEEEEECCTTSTTSCCCS
T ss_pred             hheeec-CCceEEEeecCCC--------CCCEEEEECCCCccc---chHH-HHH-HHhhhcCeEEEEECCCCCCCCCCCC
Confidence            334444 8889998888542        347899999998763   3333 223 3445579999999999987654321


Q ss_pred             HhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccch
Q psy463          552 KYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIYS  630 (790)
Q Consensus       552 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~~  630 (790)
                      .      .......+..+.+..+++..   +..+++++|||+||.+++.++.++|. +++++++.+|........ ....
T Consensus        72 ~------~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~  141 (286)
T 3qit_A           72 M------VTSYSSLTFLAQIDRVIQEL---PDQPLLLVGHSMGAMLATAIASVRPK-KIKELILVELPLPAEESKKESAV  141 (286)
T ss_dssp             S------GGGCSHHHHHHHHHHHHHHS---CSSCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCCCCCC---CCHH
T ss_pred             C------CCCcCHHHHHHHHHHHHHhc---CCCCEEEEEeCHHHHHHHHHHHhChh-hccEEEEecCCCCCccccchhhh
Confidence            0      11244667777777776644   34789999999999999999999885 899999999876543211 0000


Q ss_pred             h------hhcCCCCccC-chhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCC
Q psy463          631 E------RYMGLPTFED-NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPT  703 (790)
Q Consensus       631 ~------~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  703 (790)
                      .      ..+....... ........   ......            ...........+..........  .......+.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  204 (286)
T 3qit_A          142 NQLTTCLDYLSSTPQHPIFPDVATAA---SRLRQA------------IPSLSEEFSYILAQRITQPNQG--GVRWSWDAI  204 (286)
T ss_dssp             HHHHHHHHHHTCCCCCCCBSSHHHHH---HHHHHH------------STTSCHHHHHHHHHHTEEEETT--EEEECSCGG
T ss_pred             HHHHHHHHHHhccccccccccHHHHH---HHhhcC------------CcccCHHHHHHHhhcccccccc--ceeeeechh
Confidence            0      0001000000 00000000   000000            0000111111111111000000  000000000


Q ss_pred             cC-Ccchhh-----hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchH
Q psy463          704 FE-DNLEGY-----KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPH  776 (790)
Q Consensus       704 ~~-~~~~~~-----~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~  776 (790)
                      .. .....+     ........+.++ ++|+|+++|++|..+|.+.+..+.+.++.    ++++++++ ||.+.. ++++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~g-gH~~~~e~p~~  278 (286)
T 3qit_A          205 IRTRSILGLNNLPGGRSQYLEMLKSI-QVPTTLVYGDSSKLNRPEDLQQQKMTMTQ----AKRVFLSG-GHNLHIDAAAA  278 (286)
T ss_dssp             GGGHHHHTTTSCTTHHHHHHHHHHHC-CSCEEEEEETTCCSSCHHHHHHHHHHSTT----SEEEEESS-SSCHHHHTHHH
T ss_pred             hhccccccccccccchhHHHHHHhcc-CCCeEEEEeCCCcccCHHHHHHHHHHCCC----CeEEEeeC-CchHhhhChHH
Confidence            00 000000     233344567788 99999999999999999999888877754    48999999 999876 6666


Q ss_pred             HHHHHH
Q psy463          777 FYHTLE  782 (790)
Q Consensus       777 ~~~~i~  782 (790)
                      +.+.|.
T Consensus       279 ~~~~i~  284 (286)
T 3qit_A          279 LASLIL  284 (286)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            666554

>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}

Probab=99.67  E-value=4.7e-16  Score=158.03  Aligned_cols=247  Identities=13%  Similarity=0.056  Sum_probs=141.7

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |+||++||.++..   ..|.  .....+++ ||.|+++|+||+|.+......    ......+++..+.+..+++..   
T Consensus        29 ~~vv~lHG~~~~~---~~~~--~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~---   95 (282)
T 3qvm_A           29 KTVLLAHGFGCDQ---NMWR--FMLPELEK-QFTVIVFDYVGSGQSDLESFS----TKRYSSLEGYAKDVEEILVAL---   95 (282)
T ss_dssp             CEEEEECCTTCCG---GGGT--TTHHHHHT-TSEEEECCCTTSTTSCGGGCC----TTGGGSHHHHHHHHHHHHHHT---
T ss_pred             CeEEEECCCCCCc---chHH--HHHHHHhc-CceEEEEecCCCCCCCCCCCC----ccccccHHHHHHHHHHHHHHc---
Confidence            8999999988763   3343  22344553 999999999998876543110    001124666666666666643   


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhh---ccccchhhhc
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKI---AALNNKVDRI  658 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~  658 (790)
                      +..+++|+|||+||.+++.++.++|. .++++++.+|..........+...+   .  .........   .........+
T Consensus        96 ~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~  169 (282)
T 3qvm_A           96 DLVNVSIIGHSVSSIIAGIASTHVGD-RISDITMICPSPCFMNFPPDYVGGF---E--RDDLEELINLMDKNYIGWANYL  169 (282)
T ss_dssp             TCCSEEEEEETHHHHHHHHHHHHHGG-GEEEEEEESCCSBSBEETTTEECSB---C--HHHHHHHHHHHHHCHHHHHHHH
T ss_pred             CCCceEEEEecccHHHHHHHHHhCch-hhheEEEecCcchhccCchhhhchh---c--cccHHHHHHHHhcchhhHHHHH
Confidence            34799999999999999999998875 8999999998754332110000000   0  000000000   0000000000


Q ss_pred             cCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       659 ~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                      .  +.     .............+...+.........          ..............+.++ ++|+|+++|++|..
T Consensus       170 ~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~  231 (282)
T 3qvm_A          170 A--PL-----VMGASHSSELIGELSGSFCTTDPIVAK----------TFAKATFFSDYRSLLEDI-STPALIFQSAKDSL  231 (282)
T ss_dssp             H--HH-----HHCTTSCHHHHHHHHHHHHHSCHHHHH----------HHHHHHHSCBCGGGGGGC-CSCEEEEEEEECTT
T ss_pred             H--hh-----ccCCccchhhHHHHHHHHhcCCcHHHH----------HHHHHHhcccHHHHHhcC-CCCeEEEEeCCCCc
Confidence            0  00     000000111111111111111111000          000000111122556788 99999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      +|++.+..+.+.++.    ++++++|+++|.+.. .++++.+.|.+||+++.
T Consensus       232 ~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~  279 (282)
T 3qvm_A          232 ASPEVGQYMAENIPN----SQLELIQAEGHCLHMTDAGLITPLLIHFIQNNQ  279 (282)
T ss_dssp             CCHHHHHHHHHHSSS----EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHhCCC----CcEEEecCCCCcccccCHHHHHHHHHHHHHhcC
Confidence            999999888887754    489999999999877 88899999999998764

>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14

Probab=99.67  E-value=8e-16  Score=153.75  Aligned_cols=184  Identities=13%  Similarity=0.075  Sum_probs=129.4

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEE--cCCCCCCChhhhHhhhhccC----CccchhHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYI--DGRNSALKGNTLKYAGYRRL----GTVEIYDQINVTR  572 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~--d~rG~~~~g~~~~~~~~~~~----~~~~~~D~~~~~~  572 (790)
                      ++.|+||++||+++..   ..|.  .....++ .+|.|+++  |++|+++++..... .....    ....++|+.++++
T Consensus        60 ~~~p~vv~~HG~~~~~---~~~~--~~~~~l~-~~~~v~~~~~d~~g~g~s~~~~~~-~~~~~~~~~~~~~~~~~~~~l~  132 (251)
T 2r8b_A           60 AGAPLFVLLHGTGGDE---NQFF--DFGARLL-PQATILSPVGDVSEHGAARFFRRT-GEGVYDMVDLERATGKMADFIK  132 (251)
T ss_dssp             TTSCEEEEECCTTCCH---HHHH--HHHHHHS-TTSEEEEECCSEEETTEEESSCBC-GGGCBCHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEEeCCCCCH---hHHH--HHHHhcC-CCceEEEecCCcCCCCCcccccCC-CCCcCCHHHHHHHHHHHHHHHH
Confidence            4579999999988762   2332  2233444 46999999  67777654321000 00000    0123567777777


Q ss_pred             HHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhcccc
Q psy463          573 YLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALN  652 (790)
Q Consensus       573 ~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  652 (790)
                      ++.++.   +..+++|+||||||++++.++.++|. +++++++.+|......                            
T Consensus       133 ~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-~v~~~v~~~~~~~~~~----------------------------  180 (251)
T 2r8b_A          133 ANREHY---QAGPVIGLGFSNGANILANVLIEQPE-LFDAAVLMHPLIPFEP----------------------------  180 (251)
T ss_dssp             HHHHHH---TCCSEEEEEETHHHHHHHHHHHHSTT-TCSEEEEESCCCCSCC----------------------------
T ss_pred             HHHhcc---CCCcEEEEEECHHHHHHHHHHHhCCc-ccCeEEEEecCCCccc----------------------------
Confidence            776632   67899999999999999999998885 7999999988643210                            


Q ss_pred             chhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEe
Q psy463          653 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH  732 (790)
Q Consensus       653 ~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~  732 (790)
                                                             .                         .....+ ++|+|+++
T Consensus       181 ---------------------------------------~-------------------------~~~~~~-~~P~li~~  195 (251)
T 2r8b_A          181 ---------------------------------------K-------------------------ISPAKP-TRRVLITA  195 (251)
T ss_dssp             ---------------------------------------C-------------------------CCCCCT-TCEEEEEE
T ss_pred             ---------------------------------------c-------------------------cccccc-CCcEEEec
Confidence                                                   0                         001223 78999999


Q ss_pred             cCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          733 GTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       733 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      |++|..++++.++.+++.+++++.++++ ++++++|.+..   +..+.+.+||+++|+
T Consensus       196 g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~---~~~~~~~~~l~~~l~  249 (251)
T 2r8b_A          196 GERDPICPVQLTKALEESLKAQGGTVET-VWHPGGHEIRS---GEIDAVRGFLAAYGG  249 (251)
T ss_dssp             ETTCTTSCHHHHHHHHHHHHHHSSEEEE-EEESSCSSCCH---HHHHHHHHHHGGGC-
T ss_pred             cCCCccCCHHHHHHHHHHHHHcCCeEEE-EecCCCCccCH---HHHHHHHHHHHHhcC
Confidence            9999999999999999999988887776 66778998853   446788999988763

>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A

Probab=99.67  E-value=5e-17  Score=166.60  Aligned_cols=246  Identities=12%  Similarity=0.030  Sum_probs=141.2

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|+||++||.++.   ...|.......+++ .||.|+++|+||.|.+...         ....+++..+.+..+++.. 
T Consensus        42 ~~~~vv~lHG~~~~---~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~s~~~---------~~~~~~~~~~~~~~~l~~l-  107 (293)
T 3hss_A           42 TGDPVVFIAGRGGA---GRTWHPHQVPAFLA-AGYRCITFDNRGIGATENA---------EGFTTQTMVADTAALIETL-  107 (293)
T ss_dssp             SSEEEEEECCTTCC---GGGGTTTTHHHHHH-TTEEEEEECCTTSGGGTTC---------CSCCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCc---hhhcchhhhhhHhh-cCCeEEEEccCCCCCCCCc---------ccCCHHHHHHHHHHHHHhc-
Confidence            34789999999877   33444233444444 7999999999997543211         1234566666666665533 


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhh---hcCCCCccCchhhhhhccccchhh
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSER---YMGLPTFEDNLEGYKIAALNNKVD  656 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~  656 (790)
                        +.++++|+|||+||.+++.++.++|. .++++++.+|..........+...   .....  ......+...  .....
T Consensus       108 --~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~  180 (293)
T 3hss_A          108 --DIAPARVVGVSMGAFIAQELMVVAPE-LVSSAVLMATRGRLDRARQFFNKAEAELYDSG--VQLPPTYDAR--ARLLE  180 (293)
T ss_dssp             --TCCSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCSSCCHHHHHHHHHHHHHHHHT--CCCCHHHHHH--HHHHH
T ss_pred             --CCCcEEEEeeCccHHHHHHHHHHChH-HHHhhheecccccCChhhhHHHHHHHHHHhhc--ccchhhHHHH--HHHhh
Confidence              34789999999999999999999885 899999999876543211111000   00000  0000000000  00000


Q ss_pred             hccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCC
Q psy463          657 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMD  736 (790)
Q Consensus       657 ~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D  736 (790)
                      .+..       ..   .............+......       ..+.+...............+.++ ++|+|+++|++|
T Consensus       181 ~~~~-------~~---~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~g~~D  242 (293)
T 3hss_A          181 NFSR-------KT---LNDDVAVGDWIAMFSMWPIK-------STPGLRCQLDCAPQTNRLPAYRNI-AAPVLVIGFADD  242 (293)
T ss_dssp             HSCH-------HH---HTCHHHHHHHHHHHHHSCCC-------CCHHHHHHHTSSCSSCCHHHHTTC-CSCEEEEEETTC
T ss_pred             hccc-------cc---ccccccHHHHHHHHhhcccc-------ccHHHHhHhhhccccchHHHHhhC-CCCEEEEEeCCC
Confidence            0000       00   00000001111111110000       000000000001111223556788 999999999999


Q ss_pred             cccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          737 DNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       737 ~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ..+|++.+..+.+.++.    +++.++|+++|.+.. +++++.+.|.+||++.
T Consensus       243 ~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~  291 (293)
T 3hss_A          243 VVTPPYLGREVADALPN----GRYLQIPDAGHLGFFERPEAVNTAMLKFFASV  291 (293)
T ss_dssp             SSSCHHHHHHHHHHSTT----EEEEEETTCCTTHHHHSHHHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHCCC----ceEEEeCCCcchHhhhCHHHHHHHHHHHHHhc
Confidence            99999998888887754    489999999999877 7889999999999864

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=99.67  E-value=1.2e-14  Score=147.29  Aligned_cols=273  Identities=9%  Similarity=0.112  Sum_probs=180.7

Q ss_pred             eCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeCCCCe
Q psy463           15 FSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGT   94 (790)
Q Consensus        15 wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~~~~~   94 (790)
                      +++||++|.|....+ ...+|.|+.+|..         ..+++...                                  
T Consensus        21 ~~~~g~~iy~~n~~d-~~~ly~~~~dg~~---------~~~l~~~~----------------------------------   56 (302)
T 3s25_A           21 FCESDGEVFFSNTND-NGRLYAMNIDGSN---------IHKLSNDT----------------------------------   56 (302)
T ss_dssp             EEEETTEEEEEEGGG-TTEEEEEETTSCS---------CEEEEEEE----------------------------------
T ss_pred             EEEeCCEEEEEeCCC-CceEEEEcCCCCC---------CEEccCCc----------------------------------
Confidence            678999999987654 4679999999984         22221100                                  


Q ss_pred             eeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCC-CCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEE
Q psy463           95 CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD-GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTE  173 (790)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~-~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~  173 (790)
                                        .--++++|++|+|......... ..+-.---..|++++++++.      ..+|+++...   
T Consensus        57 ------------------~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~------~~~l~~~~~~---  109 (302)
T 3s25_A           57 ------------------AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG------STVLDPDPCI---  109 (302)
T ss_dssp             ------------------EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC------CEEEECSCEE---
T ss_pred             ------------------eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc------ceEeecCCcc---
Confidence                              0134789999999986542110 00000001379999999884      5667666543   


Q ss_pred             EEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEE
Q psy463          174 ILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVN  253 (790)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (790)
                        .+.++++. |+|......        ....||++++++.+      ..+|+                 ....    ..
T Consensus       110 --~~s~~g~~-Iy~~~~~~~--------~~~~Iy~~~~dGs~------~~~lt-----------------~~~~----~~  151 (302)
T 3s25_A          110 --YASLIGNY-IYYLHYDTQ--------TATSLYRIRIDGEE------KKKIK-----------------NHYL----FT  151 (302)
T ss_dssp             --EEEEETTE-EEEEEESSS--------SCEEEEEEETTSCC------CEEEE-----------------SSCC----CC
T ss_pred             --EEEEeCCE-EEEEeecCC--------CCceEEEEECCCCC------eEEEe-----------------CCCc----eE
Confidence              33444443 666541100        12699999999876      45565                 2222    34


Q ss_pred             EccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEE
Q psy463          254 WANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHL  333 (790)
Q Consensus       254 wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l  333 (790)
                      ++|+|+.++|++.  +..+|++++++++..++|+...        ...| ++|+|++|+++..    ..+       .+|
T Consensus       152 ~~~~g~~iy~t~~--g~~~Iy~~~l~g~~~~~l~~~~--------~~~~-~~P~g~~iy~t~~----~~~-------~~I  209 (302)
T 3s25_A          152 CNTSDRYFYYNNP--KNGQLYRYDTASQSEALFYDCN--------CYKP-VVLDDTNVYYMDV----NRD-------NAI  209 (302)
T ss_dssp             SEEETTEEEEECT--TTCCEEEEETTTTEEEEEECSC--------EEEE-EEEETTEEEEEEG----GGT-------TEE
T ss_pred             eeEECCEEEEEeC--CCceEEEEECCCCCEEEEeCCC--------ccce-eeecCCEEEEEEc----CCC-------cEE
Confidence            7899998889876  4456999999998888775321        1134 5699999997544    222       489


Q ss_pred             EEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcc
Q psy463          334 TFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKC  413 (790)
Q Consensus       334 ~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~  413 (790)
                      ++++++++.      .+.|+....     +.|+|++++|||....+.   ..|+++++++  ...++|+..       . 
T Consensus       210 ~~~~ldG~~------~~~Lt~~~~-----~~~~~~g~~Iy~~~~~~~---~~i~~~~~DG--~~r~~l~~~-------~-  265 (302)
T 3s25_A          210 VHVNINNPN------PVVLTEANI-----EHYNVYGSLIFYQRGGDN---PALCVVKNDG--TGFKELAKG-------E-  265 (302)
T ss_dssp             EEECSSSCC------CEECSCSCE-----EEEEEETTEEEEEECSSS---CEEEEEETTS--CCCEEEEES-------C-
T ss_pred             EEEECCCCC------eEEEeCCCc-----ceEEECCCEEEEEECCCC---cEEEEEECCC--CccEEeeCC-------c-
Confidence            999999987      788886542     568999999999876543   6899999998  566677652       1 


Q ss_pred             cEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          414 SYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       414 ~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                         ...+++-+.+|+++.-...  .|+++.+++.
T Consensus       266 ---~~~i~i~~d~Iy~td~~~~--~i~~~~~dGs  294 (302)
T 3s25_A          266 ---FCNINVTSQYVYFTDFVSN--KEYCTSTQNP  294 (302)
T ss_dssp             ---EEEEEECSSEEEEEETTTC--CEEEEESSSC
T ss_pred             ---cceEEEeCCEEEEEECCCC--eEEEEECCCC
Confidence               1367888999988854333  4888877663

>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A

Probab=99.67  E-value=1e-15  Score=171.00  Aligned_cols=286  Identities=13%  Similarity=0.071  Sum_probs=169.5

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+.+.++..||.+|.+.++.|.+     .+++|+||+.||.+........|.. .....++++||+|+.+|+||+++++.
T Consensus         9 ~~~v~i~~~DG~~L~~~~~~P~~-----~~~~P~vv~~~~~g~~~~~~~~y~~-~~~~~la~~Gy~vv~~D~RG~G~S~g   82 (587)
T 3i2k_A            9 ASNVMVPMRDGVRLAVDLYRPDA-----DGPVPVLLVRNPYDKFDVFAWSTQS-TNWLEFVRDGYAVVIQDTRGLFASEG   82 (587)
T ss_dssp             EEEEEEECTTSCEEEEEEEEECC-----SSCEEEEEEEESSCTTCHHHHHTTT-CCTHHHHHTTCEEEEEECTTSTTCCS
T ss_pred             EEEEEEECCCCCEEEEEEEECCC-----CCCeeEEEEECCcCCCccccccchh-hHHHHHHHCCCEEEEEcCCCCCCCCC
Confidence            45678899999999999999974     4578999999876554211111110 12034445899999999999988765


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC-CCccccccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV-TDWIYYDTI  628 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~-~~~~~~~~~  628 (790)
                      .+..     + ..+.+|+.++++|+.+ .++.+ .+|+++|+||||++++.++..+|+ .++++|+.++. .++... ..
T Consensus        83 ~~~~-----~-~~~~~D~~~~i~~l~~-~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~-~l~a~v~~~~~~~d~~~~-~~  152 (587)
T 3i2k_A           83 EFVP-----H-VDDEADAEDTLSWILE-QAWCD-GNVGMFGVSYLGVTQWQAAVSGVG-GLKAIAPSMASADLYRAP-WY  152 (587)
T ss_dssp             CCCT-----T-TTHHHHHHHHHHHHHH-STTEE-EEEEECEETHHHHHHHHHHTTCCT-TEEEBCEESCCSCTCCCC-CS
T ss_pred             cccc-----c-cchhHHHHHHHHHHHh-CCCCC-CeEEEEeeCHHHHHHHHHHhhCCC-ccEEEEEeCCcccccccc-ee
Confidence            5332     1 2568999999999987 66555 799999999999999999998775 89999999998 665321 00


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHH-------HHHHHHhcCcc----h--hc
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMM-------LAKSLQHADIM----F--QS  695 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~-------l~~~l~~~~~~----~--~~  695 (790)
                      +..   |... ......|... .........        +..++.. ......       +...+......    +  ..
T Consensus       153 ~~g---G~~~-~~~~~~w~~~-~~~~~~~~~--------~~~~p~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (587)
T 3i2k_A          153 GPG---GALS-VEALLGWSAL-IGTGLITSR--------SDARPED-AADFVQLAAILNDVAGAASVTPLAEQPLLGRLI  218 (587)
T ss_dssp             CTT---CCCC-HHHHHHHHHH-HHHHHHHHS--------SSCCTTH-HHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHC
T ss_pred             ecC---Cccc-cchHHHHHHH-hhhhccccc--------ccCCccc-hhhhhhhhhhhhHHHHHHhcCCcccchhccccc
Confidence            100   1100 0000001000 000000000        0000000 000000       00000000000    0  00


Q ss_pred             ccccCC-CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--
Q psy463          696 QRYMGL-PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--  772 (790)
Q Consensus       696 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--  772 (790)
                      ..+... ........+|+..++...+++| ++|+|+++|..|..+  ..+.+++++|+..+. .++++-|. .|....  
T Consensus       219 ~~~~~~~~~~~~~d~yw~~~s~~~~l~~I-~vPvL~v~Gw~D~~~--~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~  293 (587)
T 3i2k_A          219 PWVIDQVVDHPDNDESWQSISLFERLGGL-ATPALITAGWYDGFV--GESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGR  293 (587)
T ss_dssp             THHHHTTTTCCSCCHHHHTTCCHHHHTTC-CCCEEEEEEEECTTH--HHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSE
T ss_pred             hhHHhhhhcCCCCChHHhcCChhhhhccC-CCCEEEEccCCCccc--hHHHHHHHHHhhcCC-CEEEECCc-cccCcccc
Confidence            000001 1122345678888888899999 999999999999865  457889999987664 36666565 465311  


Q ss_pred             ---------cch---HHHHHHHHHHHHhhC
Q psy463          773 ---------VRP---HFYHTLERFLDSCFA  790 (790)
Q Consensus       773 ---------~~~---~~~~~i~~fl~~~l~  790 (790)
                               ...   +..+.+.+||+++||
T Consensus       294 ~g~~~~g~~~~~~~~~~~~~~~~wFD~~Lk  323 (587)
T 3i2k_A          294 NADRKFGIAATYPIQEATTMHKAFFDRHLR  323 (587)
T ss_dssp             ETTEECCGGGSCCHHHHHHHHHHHHHHHHS
T ss_pred             CCCcccCCccccccchhhHHHHHHHHHHhc
Confidence                     111   334899999999986

>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}

Probab=99.67  E-value=2.3e-15  Score=148.32  Aligned_cols=205  Identities=15%  Similarity=0.117  Sum_probs=129.9

Q ss_pred             EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHh-cCCeEEEEEcCCCCCC--C----hhhhHhh
Q psy463          482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD-NKDIVVAYIDGRNSAL--K----GNTLKYA  554 (790)
Q Consensus       482 ~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~d~rG~~~--~----g~~~~~~  554 (790)
                      .+.+.++.|..      ...++||++||.+...   ..+. .+...+.. -.++.+++|+.+-.+.  .    +..|...
T Consensus        24 ~l~y~ii~P~~------~~~~~VI~LHG~G~~~---~dl~-~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~   93 (246)
T 4f21_A           24 AMNYELMEPAK------QARFCVIWLHGLGADG---HDFV-DIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDI   93 (246)
T ss_dssp             CCCEEEECCSS------CCCEEEEEEEC--CCC---CCGG-GGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTC
T ss_pred             CcCceEeCCCC------cCCeEEEEEcCCCCCH---HHHH-HHHHHhhhcCCCeEEEeCCCCccccccCCCCCccccccc
Confidence            46677788863      3357899999976652   2222 11222211 1367888887542111  0    1111100


Q ss_pred             h-------hccCCccchhHHHHHHHHHHH---hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc
Q psy463          555 G-------YRRLGTVEIYDQINVTRYLQE---NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY  624 (790)
Q Consensus       555 ~-------~~~~~~~~~~D~~~~~~~l~~---~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~  624 (790)
                      .       ........+....+.+..+++   ..+ +|.+||+++|+|+||.+++.++.++|. .++++++.++..... 
T Consensus        94 ~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~g-i~~~ri~l~GfSqGg~~a~~~~~~~~~-~~a~~i~~sG~lp~~-  170 (246)
T 4f21_A           94 KSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQG-IASENIILAGFSQGGIIATYTAITSQR-KLGGIMALSTYLPAW-  170 (246)
T ss_dssp             CCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSS-CCCEEEEESCCCTTH-
T ss_pred             ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcC-CChhcEEEEEeCchHHHHHHHHHhCcc-ccccceehhhccCcc-
Confidence            0       000001112333333333322   143 889999999999999999999998885 899999888742110 


Q ss_pred             ccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463          625 YDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTF  704 (790)
Q Consensus       625 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  704 (790)
                                         ..+..                                         .              
T Consensus       171 -------------------~~~~~-----------------------------------------~--------------  176 (246)
T 4f21_A          171 -------------------DNFKG-----------------------------------------K--------------  176 (246)
T ss_dssp             -------------------HHHST-----------------------------------------T--------------
T ss_pred             -------------------ccccc-----------------------------------------c--------------
Confidence                               00000                                         0              


Q ss_pred             CCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHH
Q psy463          705 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERF  784 (790)
Q Consensus       705 ~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~f  784 (790)
                                   ....+- ++|+|++||+.|++||++.++++++.|+++|.++++..||+.+|.+.   .+-++.+.+|
T Consensus       177 -------------~~~~~~-~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~---~~~l~~~~~f  239 (246)
T 4f21_A          177 -------------ITSINK-GLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC---MEEIKDISNF  239 (246)
T ss_dssp             -------------CCGGGT-TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC---HHHHHHHHHH
T ss_pred             -------------cccccc-CCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC---HHHHHHHHHH
Confidence                         000112 68999999999999999999999999999999999999999999885   3556889999


Q ss_pred             HHHhhC
Q psy463          785 LDSCFA  790 (790)
Q Consensus       785 l~~~l~  790 (790)
                      |+++|+
T Consensus       240 L~k~l~  245 (246)
T 4f21_A          240 IAKTFK  245 (246)
T ss_dssp             HHHHTT
T ss_pred             HHHHhC
Confidence            999986

>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A

Probab=99.67  E-value=8.4e-17  Score=163.38  Aligned_cols=261  Identities=13%  Similarity=0.074  Sum_probs=141.6

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +...++..+| .+.+...         ....|+||++||+++..   ..|. .+...+++ +||.|+++|+||+|.+...
T Consensus         4 ~~~~~~~~~~-~~~~~~~---------~~~~~~vv~lHG~~~~~---~~~~-~~~~~l~~-~g~~v~~~d~~G~G~s~~~   68 (279)
T 4g9e_A            4 NYHELETSHG-RIAVRES---------EGEGAPLLMIHGNSSSG---AIFA-PQLEGEIG-KKWRVIAPDLPGHGKSTDA   68 (279)
T ss_dssp             EEEEEEETTE-EEEEEEC---------CCCEEEEEEECCTTCCG---GGGH-HHHHSHHH-HHEEEEEECCTTSTTSCCC
T ss_pred             EEEEEEcCCc-eEEEEec---------CCCCCeEEEECCCCCch---hHHH-HHHhHHHh-cCCeEEeecCCCCCCCCCC
Confidence            3445566455 5555433         22457899999998763   2333 22333344 6999999999998876532


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS  630 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~  630 (790)
                      ....     ....+.+..+.+..+++..   +..+++|+|||+||.+++.++.++|. ..+.+++.++..........+.
T Consensus        69 ~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~  139 (279)
T 4g9e_A           69 IDPD-----RSYSMEGYADAMTEVMQQL---GIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFK  139 (279)
T ss_dssp             SCHH-----HHSSHHHHHHHHHHHHHHH---TCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBC
T ss_pred             CCcc-----cCCCHHHHHHHHHHHHHHh---CCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhc
Confidence            1000     1134566666666666533   34689999999999999999999986 4444444444433211100000


Q ss_pred             ----hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCC
Q psy463          631 ----ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFED  706 (790)
Q Consensus       631 ----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  706 (790)
                          .......  ........     ........          . ...    ..+...+...........       ..
T Consensus       140 ~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~----------~-~~~----~~~~~~~~~~~~~~~~~~-------~~  190 (279)
T 4g9e_A          140 SGPDMALAGQE--IFSERDVE-----SYARSTCG----------E-PFE----ASLLDIVARTDGRARRIM-------FE  190 (279)
T ss_dssp             CSTTGGGGGCS--CCCHHHHH-----HHHHHHHC----------S-SCC----HHHHHHHHHSCHHHHHHH-------HH
T ss_pred             cchhhhhcCcc--cccHHHHH-----HHHHhhcc----------C-ccc----HHHHHHHHhhhccchHHH-------HH
Confidence                0000000  00000000     00000000          0 000    011111111000000000       00


Q ss_pred             cchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHH-HHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHH
Q psy463          707 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLA-KSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERF  784 (790)
Q Consensus       707 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~-~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~f  784 (790)
                      .............+.++ ++|+|+++|++|..+|++.+..+. +.++    .++++++|++||.+.. .++++.+.+.+|
T Consensus       191 ~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~p~~~~~~i~~f  265 (279)
T 4g9e_A          191 KFGSGTGGNQRDIVAEA-QLPIAVVNGRDEPFVELDFVSKVKFGNLW----EGKTHVIDNAGHAPFREAPAEFDAYLARF  265 (279)
T ss_dssp             HHHHTCBCCHHHHHHHC-CSCEEEEEETTCSSBCHHHHTTCCCSSBG----GGSCEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred             HhhccCCchHHHHHHhc-CCCEEEEEcCCCcccchHHHHHHhhccCC----CCeEEEECCCCcchHHhCHHHHHHHHHHH
Confidence            00000011122456788 999999999999999998877765 4333    3488999999999876 889999999999


Q ss_pred             HHHhh
Q psy463          785 LDSCF  789 (790)
Q Consensus       785 l~~~l  789 (790)
                      |+++-
T Consensus       266 l~~~~  270 (279)
T 4g9e_A          266 IRDCT  270 (279)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            98763

>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*

Probab=99.66  E-value=6.5e-15  Score=150.32  Aligned_cols=207  Identities=10%  Similarity=0.067  Sum_probs=136.0

Q ss_pred             CCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-----c-chHHHHHhc---CCeEE
Q psy463          466 TLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-----V-DWNLYLADN---KDIVV  536 (790)
Q Consensus       466 ~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-----~-~~~~~~~~~---~G~~v  536 (790)
                      ..++.+.+++.+.++ .+.+++++|.++.  +.+++|+|+++||+++...   .|.     . .+...+.++   .+++|
T Consensus        37 ~~g~~~~~~~~s~~~-~~~~~vy~P~~~~--~~~~~Pvlv~lHG~~~~~~---~~~~~~~~~~~~~~~l~~~g~~~~~iv  110 (297)
T 1gkl_A           37 QAGRIVKETYTGING-TKSLNVYLPYGYD--PNKKYNIFYLMHGGGENEN---TIFSNDVKLQNILDHAIMNGELEPLIV  110 (297)
T ss_dssp             SCCEEEEEEEEETTE-EEEEEEEECTTCC--TTSCCEEEEEECCTTCCTT---STTSTTTCHHHHHHHHHHTTSSCCEEE
T ss_pred             CCceEEEEEEEcCCC-EEEEEEEeCCCCC--CCCCCCEEEEECCCCCCcc---hhhcccchHHHHHHHHHHcCCCCCEEE
Confidence            345677788888776 8999999999886  5678999999999887532   221     1 223334432   26999


Q ss_pred             EEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC-----------cCCCceEEEEechHHHHHHHHHhcC
Q psy463          537 AYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY-----------IDKTRTAIWGWSYGGYATGLALALD  605 (790)
Q Consensus       537 ~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~-----------~d~~ri~i~G~S~GG~~a~~~a~~~  605 (790)
                      +++|++|....+..+..        ..+.|+   +.++.+++..           .|+.+++|+|+||||++|+.++.++
T Consensus       111 v~pd~~~~~~~~~~~~~--------~~~~~l---~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~  179 (297)
T 1gkl_A          111 VTPTFNGGNCTAQNFYQ--------EFRQNV---IPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNC  179 (297)
T ss_dssp             EECCSCSTTCCTTTHHH--------HHHHTH---HHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHH
T ss_pred             EEecCcCCccchHHHHH--------HHHHHH---HHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhC
Confidence            99999875332222211        112333   4444443442           3667899999999999999999988


Q ss_pred             CCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHH
Q psy463          606 PSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKS  685 (790)
Q Consensus       606 p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~  685 (790)
                      |+ .|+++++.+|...+...                   .+.                              ....+...
T Consensus       180 p~-~f~~~v~~sg~~~~~~~-------------------~~~------------------------------~~~~~~~~  209 (297)
T 1gkl_A          180 LD-YVAYFMPLSGDYWYGNS-------------------PQD------------------------------KANSIAEA  209 (297)
T ss_dssp             TT-TCCEEEEESCCCCBSSS-------------------HHH------------------------------HHHHHHHH
T ss_pred             ch-hhheeeEeccccccCCc-------------------cch------------------------------hhhHHHHH
Confidence            85 89999999996543210                   000                              00000000


Q ss_pred             HHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcC----------
Q psy463          686 LQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD----------  755 (790)
Q Consensus       686 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g----------  755 (790)
                      +..                             ..+... ..++++.+|+.|..  ..+++++.++|+++|          
T Consensus       210 ~~~-----------------------------~~~~~~-~~~l~~~~G~~D~~--~~~~~~l~~~L~~~g~~~~~~~~~~  257 (297)
T 1gkl_A          210 INR-----------------------------SGLSKR-EYFVFAATGSEDIA--YANMNPQIEAMKALPHFDYTSDFSK  257 (297)
T ss_dssp             HHH-----------------------------HTCCTT-SCEEEEEEETTCTT--HHHHHHHHHHHHTSTTCCBBSCTTT
T ss_pred             Hhh-----------------------------ccCCcC-cEEEEEEeCCCccc--chhHHHHHHHHHHcCCccccccccC
Confidence            000                             011112 46777789999976  457889999999998          


Q ss_pred             CceEEEEcCCCCCcCC
Q psy463          756 IMFQSQTYPDEEHGLI  771 (790)
Q Consensus       756 ~~~~~~~~p~~~H~~~  771 (790)
                      +++++.++||++|.+.
T Consensus       258 ~~~~~~~~~g~gH~~~  273 (297)
T 1gkl_A          258 GNFYFLVAPGATHWWG  273 (297)
T ss_dssp             CCEEEEEETTCCSSHH
T ss_pred             CceEEEECCCCCcCHH
Confidence            5899999999999653

>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10

Probab=99.66  E-value=3.4e-16  Score=159.74  Aligned_cols=259  Identities=13%  Similarity=0.082  Sum_probs=140.5

Q ss_pred             CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCC-CccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhh
Q psy463          478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGP-SSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGY  556 (790)
Q Consensus       478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~-~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~  556 (790)
                      .+|..+++....+        .+.|+||++||.+ +... ...|.. .. ..++ .+|.|+++|+||+|.+.....    
T Consensus        14 ~~g~~l~y~~~g~--------~g~p~vvllHG~~~~~~~-~~~~~~-~~-~~L~-~~~~vi~~D~~G~G~S~~~~~----   77 (285)
T 1c4x_A           14 SGTLASHALVAGD--------PQSPAVVLLHGAGPGAHA-ASNWRP-II-PDLA-ENFFVVAPDLIGFGQSEYPET----   77 (285)
T ss_dssp             CTTSCEEEEEESC--------TTSCEEEEECCCSTTCCH-HHHHGG-GH-HHHH-TTSEEEEECCTTSTTSCCCSS----
T ss_pred             ECCEEEEEEecCC--------CCCCEEEEEeCCCCCCcc-hhhHHH-HH-HHHh-hCcEEEEecCCCCCCCCCCCC----
Confidence            3788888765521        2346799999975 2211 223332 12 3344 359999999999876543210    


Q ss_pred             ccCCccchhHH----HHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhh
Q psy463          557 RRLGTVEIYDQ----INVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSER  632 (790)
Q Consensus       557 ~~~~~~~~~D~----~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~  632 (790)
                         ....+++.    .+.+..+++.++   ..++.|+||||||.+++.++.++|+ +++.+++.+|..............
T Consensus        78 ---~~~~~~~~~~~~~~dl~~~l~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~  150 (285)
T 1c4x_A           78 ---YPGHIMSWVGMRVEQILGLMNHFG---IEKSHIVGNSMGGAVTLQLVVEAPE-RFDKVALMGSVGAPMNARPPELAR  150 (285)
T ss_dssp             ---CCSSHHHHHHHHHHHHHHHHHHHT---CSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCSSCCSSCCHHHHH
T ss_pred             ---cccchhhhhhhHHHHHHHHHHHhC---CCccEEEEEChHHHHHHHHHHhChH-HhheEEEeccCCCCCCccchhHHH
Confidence               01334555    555555554333   4789999999999999999999985 899998888754311100000000


Q ss_pred             hcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCC-ccC-hhh-HHHHHHHHHhcCcch-h-cccccC-CCCcCC
Q psy463          633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDD-NVH-FQQ-SMMLAKSLQHADIMF-Q-SQRYMG-LPTFED  706 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~-~v~-~~~-~~~l~~~l~~~~~~~-~-~~~~~~-~~~~~~  706 (790)
                      ...... ........     .....+.          .+. ... ... .......+.  .... . ...... ...+..
T Consensus       151 ~~~~~~-~~~~~~~~-----~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  212 (285)
T 1c4x_A          151 LLAFYA-DPRLTPYR-----ELIHSFV----------YDPENFPGMEEIVKSRFEVAN--DPEVRRIQEVMFESMKAGME  212 (285)
T ss_dssp             HHTGGG-SCCHHHHH-----HHHHTTS----------SCSTTCTTHHHHHHHHHHHHH--CHHHHHHHHHHHHHHSSCCG
T ss_pred             HHHHhc-cccHHHHH-----HHHHHhh----------cCcccccCcHHHHHHHHHhcc--CHHHHHHHHHHhcccccccc
Confidence            000000 00000000     0000000          000 000 000 000000000  0000 0 000000 000000


Q ss_pred             cchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463          707 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL  785 (790)
Q Consensus       707 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl  785 (790)
                        .   .......+.++ ++|+|+++|++|..+|+..++.+++.++.    .+++++|++||.+.. .++++.+.+.+||
T Consensus       213 --~---~~~~~~~l~~i-~~P~lii~G~~D~~~p~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl  282 (285)
T 1c4x_A          213 --S---LVIPPATLGRL-PHDVLVFHGRQDRIVPLDTSLYLTKHLKH----AELVVLDRCGHWAQLERWDAMGPMLMEHF  282 (285)
T ss_dssp             --G---GCCCHHHHTTC-CSCEEEEEETTCSSSCTHHHHHHHHHCSS----EEEEEESSCCSCHHHHSHHHHHHHHHHHH
T ss_pred             --c---cccchhhhccC-CCCEEEEEeCCCeeeCHHHHHHHHHhCCC----ceEEEeCCCCcchhhcCHHHHHHHHHHHH
Confidence              0   00112456788 99999999999999999998888877653    589999999999877 7889999999999


Q ss_pred             HH
Q psy463          786 DS  787 (790)
Q Consensus       786 ~~  787 (790)
                      .+
T Consensus       283 ~~  284 (285)
T 1c4x_A          283 RA  284 (285)
T ss_dssp             HC
T ss_pred             hc
Confidence            75

>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40

Probab=99.66  E-value=3.2e-15  Score=159.33  Aligned_cols=290  Identities=12%  Similarity=0.075  Sum_probs=149.3

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccc-----c-ccccchHH--HHHhcCCeEEEEEcCCC-CCCChh
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVT-----E-RFSVDWNL--YLADNKDIVVAYIDGRN-SALKGN  549 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~-----~-~~~~~~~~--~~~~~~G~~v~~~d~rG-~~~~g~  549 (790)
                      +|.++++....+.+     ..+.|+||++||.++.....     . .|.. +..  ..+++.||.|+++|+|| .+++..
T Consensus        42 ~g~~l~y~~~g~~~-----~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~-~~~~~~~L~~~g~~vi~~D~~G~~g~s~~  115 (377)
T 2b61_A           42 SYINVAYQTYGTLN-----DEKNNAVLICHALTGDAEPYFDDGRDGWWQN-FMGAGLALDTDRYFFISSNVLGGCKGTTG  115 (377)
T ss_dssp             CSEEEEEEEESCCC-----TTCCCEEEEECCTTCCSCSCCSSSCCCTTGG-GEETTSSEETTTCEEEEECCTTCSSSSSC
T ss_pred             cceeEEEEeccccc-----ccCCCeEEEeCCCCCccccccccccchhhhh-ccCcccccccCCceEEEecCCCCCCCCCC
Confidence            44566666554432     22358999999998874310     0 0221 111  12435899999999999 455432


Q ss_pred             hhHhhh-----h-ccCCccchhHHHHHHHHHHHhCCCcCCCceE-EEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463          550 TLKYAG-----Y-RRLGTVEIYDQINVTRYLQENLPYIDKTRTA-IWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW  622 (790)
Q Consensus       550 ~~~~~~-----~-~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~-i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~  622 (790)
                      ......     + ..+....+.++.+.+..+++.+   +..++. |+||||||.+++.+|.++|. +++++|+.++....
T Consensus       116 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~  191 (377)
T 2b61_A          116 PSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL---GISHLKAIIGGSFGGMQANQWAIDYPD-FMDNIVNLCSSIYF  191 (377)
T ss_dssp             TTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT---TCCCEEEEEEETHHHHHHHHHHHHSTT-SEEEEEEESCCSSC
T ss_pred             CcccCccccccccccCCcccHHHHHHHHHHHHHHc---CCcceeEEEEEChhHHHHHHHHHHCch-hhheeEEeccCccc
Confidence            210000     0 1111246778877777777644   357887 99999999999999999986 89999999886543


Q ss_pred             ccccccch----hhhcCCCCc-----c--C-chhhh-----hh----ccccchhhhccCCcEEEEeecCCCc--cChhhH
Q psy463          623 IYYDTIYS----ERYMGLPTF-----E--D-NLEGY-----KI----AALNNKVDRIRDKQYLLVHGTMDDN--VHFQQS  679 (790)
Q Consensus       623 ~~~~~~~~----~~~~g~~~~-----~--~-~~~~~-----~~----~~~~~~~~~~~~~p~l~~~g~~d~~--v~~~~~  679 (790)
                      ......+.    ..+...+..     .  . .....     ..    .........+.. . .    ..+..  ......
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~----~~~~~~~~~~~~~  265 (377)
T 2b61_A          192 SAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGR-A-T----KSDGSFWGDYFQV  265 (377)
T ss_dssp             CHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTT-C-B----CTTCCTTSCCBHH
T ss_pred             cccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhcc-c-c----ccccccccchHHH
Confidence            21100000    001010000     0  0 00000     00    000000000100 0 0    00000  000011


Q ss_pred             HHHHHH----HHh-cCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhc
Q psy463          680 MMLAKS----LQH-ADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA  754 (790)
Q Consensus       680 ~~l~~~----l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~  754 (790)
                      ..+...    +.. .........+.....+ +...  ........+.++ ++|+|+++|++|..+|+....+..+.+.+.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~  341 (377)
T 2b61_A          266 ESYLSYQGKKFLERFDANSYLHLLRALDMY-DPSL--GYENVKEALSRI-KARYTLVSVTTDQLFKPIDLYKSKQLLEQS  341 (377)
T ss_dssp             HHHHHHHHHHHHTTCCHHHHHHHHHHHHHC-CTTT--TSSCHHHHHTTC-CSEEEEEEETTCSSSCHHHHHHHHHHHHHT
T ss_pred             HHHHHhhhhhhccccChhHHHHHHHHHhcc-cccc--ccchHHhhhhhc-CCCEEEEecCCcccCCccchHHHHHHHHhc
Confidence            111110    000 0000000000000000 0000  000112567788 999999999999999995555555555555


Q ss_pred             CCceEEEEcC-CCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          755 DIMFQSQTYP-DEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       755 g~~~~~~~~p-~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ...++++++| ++||.+.. .++++.+.|.+||+++
T Consensus       342 ~~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~  377 (377)
T 2b61_A          342 GVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAGN  377 (377)
T ss_dssp             TCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHTC
T ss_pred             CCCceEEEeCCCCCchhhhcCHHHHHHHHHHHHhcC
Confidence            5567999999 99999887 7889999999999863

>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A

Probab=99.66  E-value=2.7e-15  Score=152.70  Aligned_cols=259  Identities=10%  Similarity=0.057  Sum_probs=143.4

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++...        +.  .|.||++||.+........|...  ...++ .+|.|+++|+||+|.+.....      
T Consensus        13 ~g~~l~y~~~--------G~--g~~vvllHG~~~~~~~~~~w~~~--~~~L~-~~~~vi~~Dl~G~G~S~~~~~------   73 (282)
T 1iup_A           13 AGVLTNYHDV--------GE--GQPVILIHGSGPGVSAYANWRLT--IPALS-KFYRVIAPDMVGFGFTDRPEN------   73 (282)
T ss_dssp             TTEEEEEEEE--------CC--SSEEEEECCCCTTCCHHHHHTTT--HHHHT-TTSEEEEECCTTSTTSCCCTT------
T ss_pred             CCEEEEEEec--------CC--CCeEEEECCCCCCccHHHHHHHH--HHhhc-cCCEEEEECCCCCCCCCCCCC------
Confidence            7888877654        21  25699999965431101233322  23344 689999999999876543210      


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                       ....+++..+.+..+++.++   .+++.|+||||||.+++.+|.++|+ +++.+|+.++........... ...+... 
T Consensus        74 -~~~~~~~~a~dl~~~l~~l~---~~~~~lvGhS~GG~ia~~~A~~~P~-~v~~lvl~~~~~~~~~~~~~~-~~~~~~~-  146 (282)
T 1iup_A           74 -YNYSKDSWVDHIIGIMDALE---IEKAHIVGNAFGGGLAIATALRYSE-RVDRMVLMGAAGTRFDVTEGL-NAVWGYT-  146 (282)
T ss_dssp             -CCCCHHHHHHHHHHHHHHTT---CCSEEEEEETHHHHHHHHHHHHSGG-GEEEEEEESCCCSCCCCCHHH-HHHHTCC-
T ss_pred             -CCCCHHHHHHHHHHHHHHhC---CCceEEEEECHhHHHHHHHHHHChH-HHHHHHeeCCccCCCCCCHHH-HHHhcCC-
Confidence             01345666666666665443   4789999999999999999999986 899999888754321100000 0000000 


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhh-hhh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIA-ALN  717 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  717 (790)
                        .....+..     ....+...+         ..............................+    ........ ...
T Consensus       147 --~~~~~~~~-----~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  206 (282)
T 1iup_A          147 --PSIENMRN-----LLDIFAYDR---------SLVTDELARLRYEASIQPGFQESFSSMFPEP----RQRWIDALASSD  206 (282)
T ss_dssp             --SCHHHHHH-----HHHHHCSSG---------GGCCHHHHHHHHHHHTSTTHHHHHHHHSCSS----THHHHHHHCCCH
T ss_pred             --CcHHHHHH-----HHHHhhcCc---------ccCCHHHHHHHHhhccChHHHHHHHHHHhcc----ccccccccccch
Confidence              00000000     000000000         0000000000000000000000000000000    00000000 011


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ..+.++ ++|+|+++|++|..+|++.++.+.+.++.    .+++++|++||.++. .++++.+.+.+||++.
T Consensus       207 ~~l~~i-~~P~lii~G~~D~~~p~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~  273 (282)
T 1iup_A          207 EDIKTL-PNETLIIHGREDQVVPLSSSLRLGELIDR----AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA  273 (282)
T ss_dssp             HHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCTT----EEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred             hhhhhc-CCCEEEEecCCCCCCCHHHHHHHHHhCCC----CeEEEECCCCCCccccCHHHHHHHHHHHHhcC
Confidence            457788 99999999999999999998888877654    489999999999877 8899999999999863

>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A

Probab=99.66  E-value=3.3e-15  Score=152.79  Aligned_cols=258  Identities=12%  Similarity=0.031  Sum_probs=142.2

Q ss_pred             CC-cEEEEEEEeCCCCCCCCCCCccEEEEEcCCC-CccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhh
Q psy463          479 PN-MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGP-SSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGY  556 (790)
Q Consensus       479 dg-~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~-~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~  556 (790)
                      +| .++++....        .++.|.||++||.+ +... ...|...  ...++ ..|.|+++|+||+|.+.....    
T Consensus        21 ~g~~~l~y~~~G--------~g~~~~vvllHG~~pg~~~-~~~w~~~--~~~L~-~~~~via~Dl~G~G~S~~~~~----   84 (291)
T 2wue_A           21 DGPLKLHYHEAG--------VGNDQTVVLLHGGGPGAAS-WTNFSRN--IAVLA-RHFHVLAVDQPGYGHSDKRAE----   84 (291)
T ss_dssp             SSEEEEEEEEEC--------TTCSSEEEEECCCCTTCCH-HHHTTTT--HHHHT-TTSEEEEECCTTSTTSCCCSC----
T ss_pred             CCcEEEEEEecC--------CCCCCcEEEECCCCCccch-HHHHHHH--HHHHH-hcCEEEEECCCCCCCCCCCCC----
Confidence            78 888877652        22236899999984 2211 2334322  23444 359999999999887643210    


Q ss_pred             ccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc-cc---ccchhh
Q psy463          557 RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY-YD---TIYSER  632 (790)
Q Consensus       557 ~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~-~~---~~~~~~  632 (790)
                         ....+++..+.+..+++.++   ..++.|+||||||.+++.+|.++|+ +++.+|+.++...... +.   ......
T Consensus        85 ---~~~~~~~~a~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~A~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~  157 (291)
T 2wue_A           85 ---HGQFNRYAAMALKGLFDQLG---LGRVPLVGNALGGGTAVRFALDYPA-RAGRLVLMGPGGLSINLFAPDPTEGVKR  157 (291)
T ss_dssp             ---CSSHHHHHHHHHHHHHHHHT---CCSEEEEEETHHHHHHHHHHHHSTT-TEEEEEEESCSSSCCCSSSCSSCHHHHH
T ss_pred             ---CCcCHHHHHHHHHHHHHHhC---CCCeEEEEEChhHHHHHHHHHhChH-hhcEEEEECCCCCCccccccccchhhHH
Confidence               01345666655555555333   4789999999999999999999986 8999998887542110 00   000000


Q ss_pred             h---cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC-CcCCcc
Q psy463          633 Y---MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP-TFEDNL  708 (790)
Q Consensus       633 ~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~  708 (790)
                      .   +..+    ......     .....+...+         ..+...........+  ...... ....... .+... 
T Consensus       158 ~~~~~~~~----~~~~~~-----~~~~~~~~~~---------~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~-  215 (291)
T 2wue_A          158 LSKFSVAP----TRENLE-----AFLRVMVYDK---------NLITPELVDQRFALA--STPESL-TATRAMGKSFAGA-  215 (291)
T ss_dssp             HHHHHHSC----CHHHHH-----HHHHTSCSSG---------GGSCHHHHHHHHHHH--TSHHHH-HHHHHHHHHHTST-
T ss_pred             HHHHhccC----CHHHHH-----HHHHHhccCc---------ccCCHHHHHHHHHHh--cCchHH-HHHHHHHhhcccc-
Confidence            0   0000    000000     0000000000         000000001111100  000000 0000000 00000 


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ..+ .......+.++ ++|+|+++|++|..+|+..++.+.+.++.    .++++++++||.+.. .++++.+.|.+||++
T Consensus       216 ~~~-~~~~~~~l~~i-~~P~lvi~G~~D~~~~~~~~~~~~~~~p~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~  289 (291)
T 2wue_A          216 DFE-AGMMWREVYRL-RQPVLLIWGREDRVNPLDGALVALKTIPR----AQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG  289 (291)
T ss_dssp             TGG-GGCGGGTGGGC-CSCEEEEEETTCSSSCGGGGHHHHHHSTT----EEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred             ccc-cchhHHHHhhC-CCCeEEEecCCCCCCCHHHHHHHHHHCCC----CeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence            000 00011456788 99999999999999999999988877654    489999999999877 788999999999864

>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}

Probab=99.66  E-value=3.8e-15  Score=153.59  Aligned_cols=268  Identities=8%  Similarity=-0.047  Sum_probs=147.6

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|..+++....+          .|+||++||.+++   ...|.. +...+++ .||.|+++|+||+|.+....       
T Consensus        17 ~g~~l~~~~~g~----------~~~vv~~HG~~~~---~~~~~~-~~~~l~~-~g~~v~~~d~~G~G~S~~~~-------   74 (309)
T 3u1t_A           17 EGATIAYVDEGS----------GQPVLFLHGNPTS---SYLWRN-IIPYVVA-AGYRAVAPDLIGMGDSAKPD-------   74 (309)
T ss_dssp             TTEEEEEEEEEC----------SSEEEEECCTTCC---GGGGTT-THHHHHH-TTCEEEEECCTTSTTSCCCS-------
T ss_pred             CCeEEEEEEcCC----------CCEEEEECCCcch---hhhHHH-HHHHHHh-CCCEEEEEccCCCCCCCCCC-------
Confidence            788888765521          3689999999876   334432 3344454 79999999999987654321       


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc-------ccccchh
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY-------YDTIYSE  631 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~-------~~~~~~~  631 (790)
                       ....+.+..+.+..+++.+   +..+++|+||||||.+++.++.++|. +++++++.+|......       .......
T Consensus        75 -~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~  149 (309)
T 3u1t_A           75 -IEYRLQDHVAYMDGFIDAL---GLDDMVLVIHDWGSVIGMRHARLNPD-RVAAVAFMEALVPPALPMPSYEAMGPQLGP  149 (309)
T ss_dssp             -SCCCHHHHHHHHHHHHHHH---TCCSEEEEEEEHHHHHHHHHHHHCTT-TEEEEEEEEESCTTTCSBSCSGGGHHHHHH
T ss_pred             -cccCHHHHHHHHHHHHHHc---CCCceEEEEeCcHHHHHHHHHHhChH-hheEEEEeccCCCCccccccccccchhhhH
Confidence             1245667776676666643   34789999999999999999999986 8898888887543221       0000000


Q ss_pred             --hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeec-CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          632 --RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGT-MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       632 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~-~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                        ..+..+  . ....... ........+.       ... ............+...+...........+..........
T Consensus       150 ~~~~~~~~--~-~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (309)
T 3u1t_A          150 LFRDLRTA--D-VGEKMVL-DGNFFVETIL-------PEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEP  218 (309)
T ss_dssp             HHHHHTST--T-HHHHHHT-TTCHHHHTHH-------HHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBS
T ss_pred             HHHHHhcc--c-hhhhhcc-ccceehhhhc-------ccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhcccccc
Confidence              000000  0 0000000 0000000000       000 000000000000000000000000000000000000000


Q ss_pred             h--hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463          709 E--GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL  785 (790)
Q Consensus       709 ~--~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl  785 (790)
                      .  ..........+.++ ++|+|+++|++|..+|.+.+..+.+.++..    ++++++++||.+.. .++++.+.|.+||
T Consensus       219 ~~~~~~~~~~~~~l~~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~gH~~~~~~p~~~~~~i~~fl  293 (309)
T 3u1t_A          219 AFAEAEVLKNGEWLMAS-PIPKLLFHAEPGALAPKPVVDYLSENVPNL----EVRFVGAGTHFLQEDHPHLIGQGIADWL  293 (309)
T ss_dssp             HHHHHHHHHHHHHHHHC-CSCEEEEEEEECSSSCHHHHHHHHHHSTTE----EEEEEEEESSCHHHHCHHHHHHHHHHHH
T ss_pred             chhhhhhhhhhhhcccC-CCCEEEEecCCCCCCCHHHHHHHHhhCCCC----EEEEecCCcccchhhCHHHHHHHHHHHH
Confidence            0  00011223456788 999999999999999999988888877654    77778999998877 8899999999999


Q ss_pred             HHhh
Q psy463          786 DSCF  789 (790)
Q Consensus       786 ~~~l  789 (790)
                      +++.
T Consensus       294 ~~~~  297 (309)
T 3u1t_A          294 RRNK  297 (309)
T ss_dssp             HHHC
T ss_pred             Hhcc
Confidence            9764

>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}

Probab=99.65  E-value=7.1e-15  Score=149.92  Aligned_cols=125  Identities=14%  Similarity=0.012  Sum_probs=84.0

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +...+...+|.++++..+.+.+       +.|.||++||.+++.   ..|.  .....+++ +|.|+++|+||+|.+...
T Consensus         6 ~~~~~~~~~g~~l~~~~~g~~~-------~~~~vvllHG~~~~~---~~~~--~~~~~L~~-~~~vi~~Dl~G~G~S~~~   72 (285)
T 3bwx_A            6 EDRYWTSSDGLRLHFRAYEGDI-------SRPPVLCLPGLTRNA---RDFE--DLATRLAG-DWRVLCPEMRGRGDSDYA   72 (285)
T ss_dssp             EEEEEECTTSCEEEEEEECBCT-------TSCCEEEECCTTCCG---GGGH--HHHHHHBB-TBCEEEECCTTBTTSCCC
T ss_pred             ccCeeecCCCceEEEEEcCCCC-------CCCcEEEECCCCcch---hhHH--HHHHHhhc-CCEEEeecCCCCCCCCCC
Confidence            4556677789999988875431       136789999988762   3333  23344553 999999999998765432


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP  618 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~  618 (790)
                      -      ......+++..+.+..+++.++   .+++.|+||||||.+++.+|.++|+ +++++|+.++
T Consensus        73 ~------~~~~~~~~~~a~dl~~~l~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lvl~~~  130 (285)
T 3bwx_A           73 K------DPMTYQPMQYLQDLEALLAQEG---IERFVAIGTSLGGLLTMLLAAANPA-RIAAAVLNDV  130 (285)
T ss_dssp             S------SGGGCSHHHHHHHHHHHHHHHT---CCSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESC
T ss_pred             C------CccccCHHHHHHHHHHHHHhcC---CCceEEEEeCHHHHHHHHHHHhCch-heeEEEEecC
Confidence            0      0011234444444444444222   4689999999999999999999985 8888887653

>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}

Probab=99.65  E-value=2.7e-15  Score=154.89  Aligned_cols=258  Identities=13%  Similarity=0.055  Sum_probs=146.8

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCC-CCChh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS-ALKGN  549 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~-~~~g~  549 (790)
                      +...+.. ++.++.++...+        ...|+||++||++++.   ..|.. +... +++ ||.|+++|+||+ |.+..
T Consensus        46 ~~~~v~~-~~~~~~~~~~g~--------~~~~~vv~lHG~~~~~---~~~~~-~~~~-L~~-g~~vi~~D~~G~gG~s~~  110 (306)
T 2r11_A           46 KSFYIST-RFGQTHVIASGP--------EDAPPLVLLHGALFSS---TMWYP-NIAD-WSS-KYRTYAVDIIGDKNKSIP  110 (306)
T ss_dssp             EEEEECC-TTEEEEEEEESC--------TTSCEEEEECCTTTCG---GGGTT-THHH-HHH-HSEEEEECCTTSSSSCEE
T ss_pred             ceEEEec-CCceEEEEeeCC--------CCCCeEEEECCCCCCH---HHHHH-HHHH-Hhc-CCEEEEecCCCCCCCCCC
Confidence            4445555 455677666432        2347899999998763   33442 2333 443 999999999998 43322


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY  629 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~  629 (790)
                      .        .......+..+.+..+++.++   ..+++|+|||+||.+++.++.++|+ +++++++.+|...........
T Consensus       111 ~--------~~~~~~~~~~~~l~~~l~~l~---~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~  178 (306)
T 2r11_A          111 E--------NVSGTRTDYANWLLDVFDNLG---IEKSHMIGLSLGGLHTMNFLLRMPE-RVKSAAILSPAETFLPFHHDF  178 (306)
T ss_dssp             C--------SCCCCHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCSSBTSCCCHHH
T ss_pred             C--------CCCCCHHHHHHHHHHHHHhcC---CCceeEEEECHHHHHHHHHHHhCcc-ceeeEEEEcCccccCcccHHH
Confidence            1        112446666666666666443   4789999999999999999999885 899999999876542211100


Q ss_pred             hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChh-hHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                      ....+...  .   .....    .....+...        .....+.. ........+. ....    .+.      ...
T Consensus       179 ~~~~~~~~--~---~~~~~----~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~----~~~------~~~  230 (306)
T 2r11_A          179 YKYALGLT--A---SNGVE----TFLNWMMND--------QNVLHPIFVKQFKAGVMWQ-DGSR----NPN------PNA  230 (306)
T ss_dssp             HHHHHTTT--S---TTHHH----HHHHHHTTT--------CCCSCHHHHHHHHHHHHCC-SSSC----CCC------CCT
T ss_pred             HHHHhHHH--H---HHHHH----HHHHHhhCC--------ccccccccccccHHHHHHH-Hhhh----hhh------hhc
Confidence            00000000  0   00000    000000000        00000000 0000000000 0000    000      000


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ...........+.++ ++|+|+++|++|..+|++.+.++.+.+.   ..++++++|+++|.+.. .++++.+.|.+||++
T Consensus       231 ~~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~  306 (306)
T 2r11_A          231 DGFPYVFTDEELRSA-RVPILLLLGEHEVIYDPHSALHRASSFV---PDIEAEVIKNAGHVLSMEQPTYVNERVMRFFNA  306 (306)
T ss_dssp             TSSSCBCCHHHHHTC-CSCEEEEEETTCCSSCHHHHHHHHHHHS---TTCEEEEETTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred             cCCCCCCCHHHHhcC-CCCEEEEEeCCCcccCHHHHHHHHHHHC---CCCEEEEeCCCCCCCcccCHHHHHHHHHHHHhC
Confidence            000011223567888 9999999999999999888876665432   23599999999998876 788999999999853

>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}

Probab=99.65  E-value=6.6e-16  Score=156.05  Aligned_cols=249  Identities=14%  Similarity=0.081  Sum_probs=141.5

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|..+++...        +  ..|+||++||.++..   ..|.. +...+....||.|+++|+||+|.+.....      
T Consensus         9 ~g~~l~y~~~--------g--~~~~vv~lhG~~~~~---~~~~~-~~~~l~~~~g~~v~~~d~~G~G~s~~~~~------   68 (272)
T 3fsg_A            9 TRSNISYFSI--------G--SGTPIIFLHGLSLDK---QSTCL-FFEPLSNVGQYQRIYLDLPGMGNSDPISP------   68 (272)
T ss_dssp             CTTCCEEEEE--------C--CSSEEEEECCTTCCH---HHHHH-HHTTSTTSTTSEEEEECCTTSTTCCCCSS------
T ss_pred             cCCeEEEEEc--------C--CCCeEEEEeCCCCcH---HHHHH-HHHHHhccCceEEEEecCCCCCCCCCCCC------
Confidence            6777776544        1  236799999988762   22321 22222222699999999999876543211      


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch-------h
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS-------E  631 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~-------~  631 (790)
                         ..+++..+.+..++++.  .+..++.++||||||.+++.++.++|. .++++++.+|............       .
T Consensus        69 ---~~~~~~~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~  142 (272)
T 3fsg_A           69 ---STSDNVLETLIEAIEEI--IGARRFILYGHSYGGYLAQAIAFHLKD-QTLGVFLTCPVITADHSKRLTGKHINILEE  142 (272)
T ss_dssp             ---CSHHHHHHHHHHHHHHH--HTTCCEEEEEEEHHHHHHHHHHHHSGG-GEEEEEEEEECSSCCGGGCCCCCCCCEECS
T ss_pred             ---CCHHHHHHHHHHHHHHH--hCCCcEEEEEeCchHHHHHHHHHhChH-hhheeEEECcccccCccccccccchhhhhh
Confidence               33445544444444420  234789999999999999999999885 8999998888753321110000       0


Q ss_pred             hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHH----HHHhcCcchhcccccCCCCcCCc
Q psy463          632 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAK----SLQHADIMFQSQRYMGLPTFEDN  707 (790)
Q Consensus       632 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~----~l~~~~~~~~~~~~~~~~~~~~~  707 (790)
                      .++.... ......+        .....             .........+..    ........+ ...+.....+   
T Consensus       143 ~~~~~~~-~~~~~~~--------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---  196 (272)
T 3fsg_A          143 DINPVEN-KEYFADF--------LSMNV-------------IINNQAWHDYQNLIIPGLQKEDKTF-IDQLQNNYSF---  196 (272)
T ss_dssp             CCCCCTT-GGGHHHH--------HHHCS-------------EESHHHHHHHHHHTHHHHHHCCHHH-HHHHTTSCSC---
T ss_pred             hhhcccC-HHHHHHH--------HHHhc-------------cCCCchhHHHHHHhhhhhhhccHHH-HHHHhhhcCC---
Confidence            0000000 0000000        00000             000011111111    111111000 0000000000   


Q ss_pred             chhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          708 LEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       708 ~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                           .......+.++ ++|+|+++|++|..+|++.+..+.+.++    .++++++++++|.+.. .++++.+.+.+||+
T Consensus       197 -----~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~  266 (272)
T 3fsg_A          197 -----TFEEKLKNINY-QFPFKIMVGRNDQVVGYQEQLKLINHNE----NGEIVLLNRTGHNLMIDQREAVGFHFDLFLD  266 (272)
T ss_dssp             -----TTHHHHTTCCC-SSCEEEEEETTCTTTCSHHHHHHHTTCT----TEEEEEESSCCSSHHHHTHHHHHHHHHHHHH
T ss_pred             -----ChhhhhhhccC-CCCEEEEEeCCCCcCCHHHHHHHHHhcC----CCeEEEecCCCCCchhcCHHHHHHHHHHHHH
Confidence                 01111234678 9999999999999999999888877664    3589999999999887 88999999999998


Q ss_pred             Hhh
Q psy463          787 SCF  789 (790)
Q Consensus       787 ~~l  789 (790)
                      +..
T Consensus       267 ~~~  269 (272)
T 3fsg_A          267 ELN  269 (272)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            754

>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*

Probab=99.65  E-value=1.2e-15  Score=154.52  Aligned_cols=247  Identities=12%  Similarity=0.034  Sum_probs=135.7

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |+||++||.+++   ...|.. +. ..++ .+|.|+++|+||+|.+......    ......+++..+.+..+++.++  
T Consensus        21 ~~vvllHG~~~~---~~~w~~-~~-~~L~-~~~~vi~~Dl~G~G~S~~~~~~----~~~~~~~~~~a~dl~~~l~~l~--   88 (271)
T 1wom_A           21 ASIMFAPGFGCD---QSVWNA-VA-PAFE-EDHRVILFDYVGSGHSDLRAYD----LNRYQTLDGYAQDVLDVCEALD--   88 (271)
T ss_dssp             SEEEEECCTTCC---GGGGTT-TG-GGGT-TTSEEEECCCSCCSSSCCTTCC----TTGGGSHHHHHHHHHHHHHHTT--
T ss_pred             CcEEEEcCCCCc---hhhHHH-HH-HHHH-hcCeEEEECCCCCCCCCCCccc----ccccccHHHHHHHHHHHHHHcC--
Confidence            789999998776   233442 22 3344 4799999999998876432100    0001234555555555555333  


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhh---ccccchhhhc
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKI---AALNNKVDRI  658 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~  658 (790)
                       ..++.++||||||.+++.++.++|+ +++.+|+.++..........+..   +..  .........   .....+...+
T Consensus        89 -~~~~~lvGhS~GG~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~  161 (271)
T 1wom_A           89 -LKETVFVGHSVGALIGMLASIRRPE-LFSHLVMVGPSPCYLNDPPEYYG---GFE--EEQLLGLLEMMEKNYIGWATVF  161 (271)
T ss_dssp             -CSCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCSCCBEETTTEEC---SBC--HHHHHHHHHHHHHCHHHHHHHH
T ss_pred             -CCCeEEEEeCHHHHHHHHHHHhCHH-hhcceEEEcCCCcCCCCCchhcc---CCC--HHHHHHHHHHHhhhHHHHHHHH
Confidence             4789999999999999999999985 88988888875321100000000   000  000000000   0000000000


Q ss_pred             cCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       659 ~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                      .  +..  .+..   ........+...+......... ..         ............+.++ ++|+|+++|++|..
T Consensus       162 ~--~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~l~~i-~~P~lvi~G~~D~~  223 (271)
T 1wom_A          162 A--ATV--LNQP---DRPEIKEELESRFCSTDPVIAR-QF---------AKAAFFSDHREDLSKV-TVPSLILQCADDII  223 (271)
T ss_dssp             H--HHH--HCCT---TCHHHHHHHHHHHHHSCHHHHH-HH---------HHHHHSCCCHHHHTTC-CSCEEEEEEETCSS
T ss_pred             H--HHH--hcCC---CchHHHHHHHHHHhcCCcHHHH-HH---------HHHHhCcchHHhcccc-CCCEEEEEcCCCCc
Confidence            0  000  0000   0011111111111111111000 00         0000000112456788 99999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      +|+..++.+.+.++.    .++++++++||.+.. .++++.+.+.+||++++
T Consensus       224 ~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~  271 (271)
T 1wom_A          224 APATVGKYMHQHLPY----SSLKQMEARGHCPHMSHPDETIQLIGDYLKAHV  271 (271)
T ss_dssp             SCHHHHHHHHHHSSS----EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHCCC----CEEEEeCCCCcCccccCHHHHHHHHHHHHHhcC
Confidence            999888888776653    589999999999877 88899999999998864

>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31

Probab=99.65  E-value=2.4e-15  Score=143.30  Aligned_cols=182  Identities=14%  Similarity=0.016  Sum_probs=118.6

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      +.|+||++||.+++..  ..|... ....++++||.|+++|++.+..               ..+.+..+.+..+.+   
T Consensus         3 g~p~vv~~HG~~~~~~--~~~~~~-~~~~l~~~g~~v~~~d~~~~~~---------------~~~~~~~~~~~~~~~---   61 (192)
T 1uxo_A            3 GTKQVYIIHGYRASST--NHWFPW-LKKRLLADGVQADILNMPNPLQ---------------PRLEDWLDTLSLYQH---   61 (192)
T ss_dssp             -CCEEEEECCTTCCTT--STTHHH-HHHHHHHTTCEEEEECCSCTTS---------------CCHHHHHHHHHTTGG---
T ss_pred             CCCEEEEEcCCCCCcc--hhHHHH-HHHHHHhCCcEEEEecCCCCCC---------------CCHHHHHHHHHHHHH---
Confidence            3478999999887631  134322 2233444799999999993221               124444444444443   


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCC-ceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSN-VFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRI  658 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~-~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  658 (790)
                      .. ..+++++||||||.+++.++.++|.. .++++++.+|.......              .  ..          ...+
T Consensus        62 ~~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~--------------~--~~----------~~~~  114 (192)
T 1uxo_A           62 TL-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT--------------L--QM----------LDEF  114 (192)
T ss_dssp             GC-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT--------------C--GG----------GGGG
T ss_pred             hc-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc--------------c--hh----------hhhh
Confidence            23 47899999999999999999988742 78999998886432100              0  00          0000


Q ss_pred             cCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463          659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN  738 (790)
Q Consensus       659 ~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~  738 (790)
                      .                                        ..+           .. ...+.++ ++|+|+++|++|..
T Consensus       115 ~----------------------------------------~~~-----------~~-~~~~~~~-~~P~l~i~g~~D~~  141 (192)
T 1uxo_A          115 T----------------------------------------QGS-----------FD-HQKIIES-AKHRAVIASKDDQI  141 (192)
T ss_dssp             T----------------------------------------CSC-----------CC-HHHHHHH-EEEEEEEEETTCSS
T ss_pred             h----------------------------------------hcC-----------CC-HHHHHhh-cCCEEEEecCCCCc
Confidence            0                                        000           00 0345567 78999999999999


Q ss_pred             cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cc---hHHHHHHHHHHHH
Q psy463          739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VR---PHFYHTLERFLDS  787 (790)
Q Consensus       739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~---~~~~~~i~~fl~~  787 (790)
                      +|++.++.+.+.+ .    .+++++++++|.+.. ..   .++.+.+.+|+++
T Consensus       142 ~~~~~~~~~~~~~-~----~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~  189 (192)
T 1uxo_A          142 VPFSFSKDLAQQI-D----AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK  189 (192)
T ss_dssp             SCHHHHHHHHHHT-T----CEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHhc-C----ceEEEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence            9999998888877 2    488999999999875 32   3456666666654

>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*

Probab=99.65  E-value=1.8e-15  Score=161.23  Aligned_cols=190  Identities=16%  Similarity=0.156  Sum_probs=126.9

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh--------------h-------Hhhh-
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT--------------L-------KYAG-  555 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~--------------~-------~~~~-  555 (790)
                      ++++|+||++||+++..   ..|.  .....++++||.|+++|++|.+.+...              +       .... 
T Consensus        95 ~~~~P~Vv~~HG~~~~~---~~~~--~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  169 (383)
T 3d59_A           95 GEKYPLVVFSHGLGAFR---TLYS--AIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEET  169 (383)
T ss_dssp             SSCEEEEEEECCTTCCT---TTTH--HHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHH
T ss_pred             CCCCCEEEEcCCCCCCc---hHHH--HHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccch
Confidence            45789999999998763   2332  333445558999999999987653210              0       0000 


Q ss_pred             --hccCCccchhHHHHHHHHHHHh-------------------CCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEE
Q psy463          556 --YRRLGTVEIYDQINVTRYLQEN-------------------LPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGI  614 (790)
Q Consensus       556 --~~~~~~~~~~D~~~~~~~l~~~-------------------~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v  614 (790)
                        ........+.|+..+++++.+.                   .+.+|.+||+++|||+||.+++.++.+.+  +++++|
T Consensus       170 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~--~v~a~v  247 (383)
T 3d59_A          170 HIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ--RFRCGI  247 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT--TCCEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC--CccEEE
Confidence              0000011256788888887641                   34577889999999999999999988764  689999


Q ss_pred             EeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchh
Q psy463          615 SVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQ  694 (790)
Q Consensus       615 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~  694 (790)
                      +.+|...               +  .                                                 . .  
T Consensus       248 ~~~~~~~---------------p--~-------------------------------------------------~-~--  258 (383)
T 3d59_A          248 ALDAWMF---------------P--L-------------------------------------------------G-D--  258 (383)
T ss_dssp             EESCCCT---------------T--C-------------------------------------------------C-G--
T ss_pred             EeCCccC---------------C--C-------------------------------------------------c-h--
Confidence            8887321               0  0                                                 0 0  


Q ss_pred             cccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--
Q psy463          695 SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--  772 (790)
Q Consensus       695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--  772 (790)
                                             ..+.++ ++|+|++||++|..++  . .+..+.+...+.+++++++++++|.+..  
T Consensus       259 -----------------------~~~~~i-~~P~Lii~g~~D~~~~--~-~~~~~~l~~~~~~~~~~~~~g~~H~~~~d~  311 (383)
T 3d59_A          259 -----------------------EVYSRI-PQPLFFINSEYFQYPA--N-IIKMKKCYSPDKERKMITIRGSVHQNFADF  311 (383)
T ss_dssp             -----------------------GGGGSC-CSCEEEEEETTTCCHH--H-HHHHHTTCCTTSCEEEEEETTCCGGGGSGG
T ss_pred             -----------------------hhhccC-CCCEEEEecccccchh--h-HHHHHHHHhcCCceEEEEeCCCcCCCcccH
Confidence                                   123456 8999999999997542  2 2333566666778999999999998631  


Q ss_pred             ------------------cc----hHHHHHHHHHHHHhhC
Q psy463          773 ------------------VR----PHFYHTLERFLDSCFA  790 (790)
Q Consensus       773 ------------------~~----~~~~~~i~~fl~~~l~  790 (790)
                                        ++    +.+.+.+.+||+++|+
T Consensus       312 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~  351 (383)
T 3d59_A          312 TFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLG  351 (383)
T ss_dssp             GGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcC
Confidence                              12    2344579999999874

>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A

Probab=99.65  E-value=1.8e-15  Score=156.20  Aligned_cols=266  Identities=12%  Similarity=0.057  Sum_probs=139.9

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG  560 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~  560 (790)
                      .++++....|.      . ..|.||++||++++   ...|..  ....+++.||.|+++|+||+|.+...-.      ..
T Consensus        34 ~~l~y~~~G~~------~-~g~~vvllHG~~~~---~~~w~~--~~~~L~~~g~rvia~Dl~G~G~S~~~~~------~~   95 (310)
T 1b6g_A           34 LRAHYLDEGNS------D-AEDVFLCLHGEPTW---SYLYRK--MIPVFAESGARVIAPDFFGFGKSDKPVD------EE   95 (310)
T ss_dssp             CEEEEEEEECT------T-CSCEEEECCCTTCC---GGGGTT--THHHHHHTTCEEEEECCTTSTTSCEESC------GG
T ss_pred             eEEEEEEeCCC------C-CCCEEEEECCCCCc---hhhHHH--HHHHHHhCCCeEEEeCCCCCCCCCCCCC------cC
Confidence            88888776542      1 13679999999876   334443  2234555789999999999887653210      01


Q ss_pred             ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccchhhhcCCCCc
Q psy463          561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIYSERYMGLPTF  639 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~~~~~~g~~~~  639 (790)
                      ...++++.+.+..+++.++   .+++.|+||||||.+++.+|.++|+ +++.+|+.++........ ..+. .+....  
T Consensus        96 ~y~~~~~a~dl~~ll~~l~---~~~~~lvGhS~Gg~va~~~A~~~P~-rv~~Lvl~~~~~~~~~~~~~~~~-~~~~~~--  168 (310)
T 1b6g_A           96 DYTFEFHRNFLLALIERLD---LRNITLVVQDWGGFLGLTLPMADPS-RFKRLIIMNAXLMTDPVTQPAFS-AFVTQP--  168 (310)
T ss_dssp             GCCHHHHHHHHHHHHHHHT---CCSEEEEECTHHHHHHTTSGGGSGG-GEEEEEEESCCCCCCTTTCTHHH-HTTTSS--
T ss_pred             CcCHHHHHHHHHHHHHHcC---CCCEEEEEcChHHHHHHHHHHhChH-hheEEEEeccccccCCccccchh-hhhhcc--
Confidence            1345666666666665433   4789999999999999999999986 889888887643100000 0000 000000  


Q ss_pred             cCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCc--ch--hcccccCCCCcCCcchhh-hhh
Q psy463          640 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI--MF--QSQRYMGLPTFEDNLEGY-KIA  714 (790)
Q Consensus       640 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~--~~--~~~~~~~~~~~~~~~~~~-~~~  714 (790)
                      ......+......  ...+..... +..+.  .....    .........-.  ..  ....+..... ......+ ...
T Consensus       169 ~~~~~~~~~~~~~--~~~~~~~~~-~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  238 (310)
T 1b6g_A          169 ADGFTAWKYDLVT--PSDLRLDQF-MKRWA--PTLTE----AEASAYAAPFPDTSYQAGVRKFPKMVA-QRDQAXIDIST  238 (310)
T ss_dssp             TTTHHHHHHHHHS--CSSCCHHHH-HHHHS--TTCCH----HHHHHHHTTCSSGGGCHHHHHHHHHHH-SCCHHHHHHHH
T ss_pred             chHHHHHHHHhcc--CchhhhhhH-HhhcC--CCCCH----HHHHHHhcccCCccchHHHHHHHHHhc-ccccchhhhhh
Confidence            0000000000000  000000000 00000  00000    00000000000  00  0000000000 0000000 001


Q ss_pred             hhhhhhh-ccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEc--CCCCCcCCCcchHHHHHHHHHHHH
Q psy463          715 ALNNKVD-RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTY--PDEEHGLIGVRPHFYHTLERFLDS  787 (790)
Q Consensus       715 ~~~~~~~-~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~--p~~~H~~~~~~~~~~~~i~~fl~~  787 (790)
                      .....+. ++ ++|+|+++|++|..+| ..+..+.+.++..    ++.++  |++||+.+..++++.+.|.+||.+
T Consensus       239 ~~~~~l~~~i-~~P~Lvi~G~~D~~~~-~~~~~~~~~ip~~----~~~~i~~~~~GH~~~~~p~~~~~~i~~Fl~~  308 (310)
T 1b6g_A          239 EAISFWQNDW-NGQTFMAIGMKDKLLG-PDVMYPMKALING----CPEPLEIADAGHFVQEFGEQVAREALKHFAE  308 (310)
T ss_dssp             HHHHHHHHTC-CSEEEEEEETTCSSSS-HHHHHHHHHHSTT----CCCCEEETTCCSCGGGGHHHHHHHHHHHHHH
T ss_pred             hHhhhhhccc-cCceEEEeccCcchhh-hHHHHHHHhcccc----cceeeecCCcccchhhChHHHHHHHHHHHhc
Confidence            1224566 89 9999999999999999 8888888887654    44444  999998765678899999999975

>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A

Probab=99.64  E-value=3.5e-15  Score=152.21  Aligned_cols=254  Identities=11%  Similarity=0.024  Sum_probs=140.4

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCC-CccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccC
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGP-SSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRL  559 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~-~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~  559 (790)
                      .++++...        +.  .|.||++||.+ +... ...|... ....++ ..|.|+++|+||+|.+...-.       
T Consensus        23 ~~l~y~~~--------G~--g~~vvllHG~~~~~~~-~~~w~~~-~~~~L~-~~~~vi~~D~~G~G~S~~~~~-------   82 (286)
T 2puj_A           23 FNIHYNEA--------GN--GETVIMLHGGGPGAGG-WSNYYRN-VGPFVD-AGYRVILKDSPGFNKSDAVVM-------   82 (286)
T ss_dssp             EEEEEEEE--------CC--SSEEEEECCCSTTCCH-HHHHTTT-HHHHHH-TTCEEEEECCTTSTTSCCCCC-------
T ss_pred             EEEEEEec--------CC--CCcEEEECCCCCCCCc-HHHHHHH-HHHHHh-ccCEEEEECCCCCCCCCCCCC-------
Confidence            77777654        21  26799999985 2211 2234322 203344 359999999999876543210       


Q ss_pred             CccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc-cc---ccchhh---
Q psy463          560 GTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY-YD---TIYSER---  632 (790)
Q Consensus       560 ~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~-~~---~~~~~~---  632 (790)
                      ....+++..+.+..++++++   .+++.|+||||||.+++.+|.++|+ +++.+|+.++...... +.   ......   
T Consensus        83 ~~~~~~~~a~dl~~~l~~l~---~~~~~lvGhS~GG~va~~~A~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~  158 (286)
T 2puj_A           83 DEQRGLVNARAVKGLMDALD---IDRAHLVGNAMGGATALNFALEYPD-RIGKLILMGPGGLGPSMFAPMPMEGIKLLFK  158 (286)
T ss_dssp             SSCHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCSCCCCCSSSCSSCHHHHHHHH
T ss_pred             cCcCHHHHHHHHHHHHHHhC---CCceEEEEECHHHHHHHHHHHhChH-hhheEEEECccccCCCcccccchhhHHHHHH
Confidence            01345666666666665443   4789999999999999999999986 8999998887542110 00   000000   


Q ss_pred             hcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh
Q psy463          633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK  712 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  712 (790)
                      ++..+    ....+.     .....+...+         ................. .... ...+...  ......  .
T Consensus       159 ~~~~~----~~~~~~-----~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~--~~~~~~--~  214 (286)
T 2puj_A          159 LYAEP----SYETLK-----QMLQVFLYDQ---------SLITEELLQGRWEAIQR-QPEH-LKNFLIS--AQKAPL--S  214 (286)
T ss_dssp             HHHSC----CHHHHH-----HHHHHHCSCG---------GGCCHHHHHHHHHHHHH-CHHH-HHHHHHH--HHHSCG--G
T ss_pred             HhhCC----cHHHHH-----HHHHHHhcCC---------ccCCHHHHHHHHHHhhc-CHHH-HHHHHHH--Hhhhhc--c
Confidence            00000    000000     0000000000         00000000000000000 0000 0000000  000000  0


Q ss_pred             hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          713 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       713 ~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .......+.++ ++|+|+++|++|..+|+..++.+.+.++.    .+++++|++||.... .++++.+.+.+||.+
T Consensus       215 ~~~~~~~l~~i-~~P~Lii~G~~D~~~p~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~  285 (286)
T 2puj_A          215 TWDVTARLGEI-KAKTFITWGRDDRFVPLDHGLKLLWNIDD----ARLHVFSKCGAWAQWEHADEFNRLVIDFLRH  285 (286)
T ss_dssp             GGCCGGGGGGC-CSCEEEEEETTCSSSCTHHHHHHHHHSSS----EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred             ccchhhHHhhc-CCCEEEEEECCCCccCHHHHHHHHHHCCC----CeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence            11122567788 99999999999999999999888877654    489999999999877 888999999999975

>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10

Probab=99.64  E-value=7.7e-15  Score=150.54  Aligned_cols=255  Identities=11%  Similarity=0.039  Sum_probs=139.7

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++...        +.  .|.||++||++.+......|..  ....++ .+|.|+++|+||+|.+. ..  .    
T Consensus        24 ~g~~l~y~~~--------g~--g~~vvllHG~~~~~~~~~~~~~--~~~~L~-~~~~vi~~Dl~G~G~S~-~~--~----   83 (296)
T 1j1i_A           24 GGVETRYLEA--------GK--GQPVILIHGGGAGAESEGNWRN--VIPILA-RHYRVIAMDMLGFGKTA-KP--D----   83 (296)
T ss_dssp             TTEEEEEEEE--------CC--SSEEEEECCCSTTCCHHHHHTT--THHHHT-TTSEEEEECCTTSTTSC-CC--S----
T ss_pred             CCEEEEEEec--------CC--CCeEEEECCCCCCcchHHHHHH--HHHHHh-hcCEEEEECCCCCCCCC-CC--C----
Confidence            7888887653        21  2578999997521110223332  223444 45999999999987654 20  0    


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                       ....+++..+.+..+++.++ + ..++.|+||||||.+++.++.++|+ +++++|+.+|.......... ....+... 
T Consensus        84 -~~~~~~~~~~dl~~~l~~l~-~-~~~~~lvGhS~Gg~ia~~~A~~~p~-~v~~lvl~~~~~~~~~~~~~-~~~~~~~~-  157 (296)
T 1j1i_A           84 -IEYTQDRRIRHLHDFIKAMN-F-DGKVSIVGNSMGGATGLGVSVLHSE-LVNALVLMGSAGLVVEIHED-LRPIINYD-  157 (296)
T ss_dssp             -SCCCHHHHHHHHHHHHHHSC-C-SSCEEEEEEHHHHHHHHHHHHHCGG-GEEEEEEESCCBCCCC-----------CC-
T ss_pred             -CCCCHHHHHHHHHHHHHhcC-C-CCCeEEEEEChhHHHHHHHHHhChH-hhhEEEEECCCCCCCCCCch-HHHHhccc-
Confidence             11345555555555555343 2 1689999999999999999999985 89999988875421100000 00000000 


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh----hh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK----IA  714 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  714 (790)
                        .....+..     ....+...+         .....................   ..+.      .......    ..
T Consensus       158 --~~~~~~~~-----~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~  212 (296)
T 1j1i_A          158 --FTREGMVH-----LVKALTNDG---------FKIDDAMINSRYTYATDEATR---KAYV------ATMQWIREQGGLF  212 (296)
T ss_dssp             --SCHHHHHH-----HHHHHSCTT---------CCCCHHHHHHHHHHHHSHHHH---HHHH------HHHHHHHHHTSSB
T ss_pred             --CCchHHHH-----HHHHhccCc---------ccccHHHHHHHHHHhhCcchh---hHHH------HHHHHHHhccccc
Confidence              00000000     000000000         000000000000000000000   0000      0000000    00


Q ss_pred             hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      .....+.++ ++|+|+++|++|..+|++.+..+.+.++.    .++++++++||.+.. .++++.+.|.+||.+++
T Consensus       213 ~~~~~l~~i-~~P~Lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~  283 (296)
T 1j1i_A          213 YDPEFIRKV-QVPTLVVQGKDDKVVPVETAYKFLDLIDD----SWGYIIPHCGHWAMIEHPEDFANATLSFLSLRV  283 (296)
T ss_dssp             CCHHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCTT----EEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC-
T ss_pred             ccHHHhhcC-CCCEEEEEECCCcccCHHHHHHHHHHCCC----CEEEEECCCCCCchhcCHHHHHHHHHHHHhccC
Confidence            011456788 99999999999999999999888877653    489999999999877 88899999999998754

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.64  E-value=2.7e-15  Score=169.01  Aligned_cols=284  Identities=13%  Similarity=0.052  Sum_probs=155.2

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+...++..||.++++....          ..|+||++||++++.   ..|. .+. ..++++||.|+++|+||+|.+.
T Consensus       236 ~~~~~~~~~~dg~~l~~~~~g----------~~p~vv~~HG~~~~~---~~~~-~~~-~~l~~~G~~v~~~D~~G~G~S~  300 (555)
T 3i28_A          236 DMSHGYVTVKPRVRLHFVELG----------SGPAVCLCHGFPESW---YSWR-YQI-PALAQAGYRVLAMDMKGYGESS  300 (555)
T ss_dssp             GSEEEEEEEETTEEEEEEEEC----------SSSEEEEECCTTCCG---GGGT-THH-HHHHHTTCEEEEECCTTSTTSC
T ss_pred             ccceeEEEeCCCcEEEEEEcC----------CCCEEEEEeCCCCch---hHHH-HHH-HHHHhCCCEEEEecCCCCCCCC
Confidence            345567777789999877652          347899999998763   3343 223 3445579999999999987654


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~  628 (790)
                      ...      ......+.+..+.+..+++.   ++..+++++||||||.+++.++.++|. .++++++.++..........
T Consensus       301 ~~~------~~~~~~~~~~~~d~~~~~~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~  370 (555)
T 3i28_A          301 APP------EIEEYCMEVLCKEMVTFLDK---LGLSQAVFIGHDWGGMLVWYMALFYPE-RVRAVASLNTPFIPANPNMS  370 (555)
T ss_dssp             CCS------CGGGGSHHHHHHHHHHHHHH---HTCSCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCCCCCCTTSC
T ss_pred             CCC------CcccccHHHHHHHHHHHHHH---cCCCcEEEEEecHHHHHHHHHHHhChH-heeEEEEEccCCCCCCcccc
Confidence            321      11113355555555555543   235799999999999999999999985 88988888775432211000


Q ss_pred             chhhhcCCCCc--------cCchhhhhhccccchhhhccC-Cc-E-E-----------EEee----cCCCccChhhHHHH
Q psy463          629 YSERYMGLPTF--------EDNLEGYKIAALNNKVDRIRD-KQ-Y-L-----------LVHG----TMDDNVHFQQSMML  682 (790)
Q Consensus       629 ~~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~-~p-~-l-----------~~~g----~~d~~v~~~~~~~l  682 (790)
                      ........+..        ..................+.. .. . .           ....    .............+
T Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (555)
T 3i28_A          371 PLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFY  450 (555)
T ss_dssp             HHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHH
T ss_pred             hHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHH
Confidence            00000000000        000000000000000000000 00 0 0           0000    00001111111112


Q ss_pred             HHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEE
Q psy463          683 AKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQT  762 (790)
Q Consensus       683 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~  762 (790)
                      ...+...+.. ....      +...............+.++ ++|+|+++|++|..+|+..+..+.+.++.    +++++
T Consensus       451 ~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~  518 (555)
T 3i28_A          451 VQQFKKSGFR-GPLN------WYRNMERNWKWACKSLGRKI-LIPALMVTAEKDFVLVPQMSQHMEDWIPH----LKRGH  518 (555)
T ss_dssp             HHHHTTTTTH-HHHH------TTSCHHHHHHHHHTTTTCCC-CSCEEEEEETTCSSSCGGGGTTGGGTCTT----CEEEE
T ss_pred             HHHHhcccch-hHHH------HHHhccccchhhcccccccc-ccCEEEEEeCCCCCcCHHHHHHHHhhCCC----ceEEE
Confidence            2222211111 0000      00000000111223445678 99999999999999999999888776653    48999


Q ss_pred             cCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          763 YPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       763 ~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      +|++||.+.. .++++.+.|.+||+++.
T Consensus       519 ~~~~gH~~~~e~p~~~~~~i~~fl~~~~  546 (555)
T 3i28_A          519 IEDCGHWTQMDKPTEVNQILIKWLDSDA  546 (555)
T ss_dssp             ETTCCSCHHHHSHHHHHHHHHHHHHHHT
T ss_pred             eCCCCCCcchhCHHHHHHHHHHHHHhcc
Confidence            9999998877 88899999999998764

>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A

Probab=99.64  E-value=2.7e-15  Score=153.96  Aligned_cols=268  Identities=11%  Similarity=-0.041  Sum_probs=148.2

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....++        ..|+||++||+++..   ..|.. +. ..++ .||.|+++|+||+|.+....       
T Consensus        18 ~g~~l~~~~~g~~--------~~~~vl~lHG~~~~~---~~~~~-~~-~~l~-~~~~v~~~d~~G~G~s~~~~-------   76 (299)
T 3g9x_A           18 LGERMHYVDVGPR--------DGTPVLFLHGNPTSS---YLWRN-II-PHVA-PSHRCIAPDLIGMGKSDKPD-------   76 (299)
T ss_dssp             TTEEEEEEEESCS--------SSCCEEEECCTTCCG---GGGTT-TH-HHHT-TTSCEEEECCTTSTTSCCCC-------
T ss_pred             CCeEEEEEecCCC--------CCCEEEEECCCCccH---HHHHH-HH-HHHc-cCCEEEeeCCCCCCCCCCCC-------
Confidence            7888888776432        246799999998763   33442 23 3344 69999999999987654321       


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc---cccchhhh--
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY---DTIYSERY--  633 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~---~~~~~~~~--  633 (790)
                       ....+++..+.+..+++..   +.++++|+|||+||.+++.++.++|. +++++++.++.......   .......+  
T Consensus        77 -~~~~~~~~~~~~~~~~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~  151 (299)
T 3g9x_A           77 -LDYFFDDHVRYLDAFIEAL---GLEEVVLVIHDWGSALGFHWAKRNPE-RVKGIACMEFIRPFPTWDEWPEFARETFQA  151 (299)
T ss_dssp             -CCCCHHHHHHHHHHHHHHT---TCCSEEEEEEHHHHHHHHHHHHHSGG-GEEEEEEEEECCCBSSGGGSCGGGHHHHHH
T ss_pred             -CcccHHHHHHHHHHHHHHh---CCCcEEEEEeCccHHHHHHHHHhcch-heeEEEEecCCcchhhhhhcchHHHHHHHH
Confidence             1245677777777777643   45789999999999999999999985 88888888755433211   11000000  


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchh-cccccCCCCcCCcchh-h
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQ-SQRYMGLPTFEDNLEG-Y  711 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~  711 (790)
                      +..+.    ...............+..       ..............+...+........ ...+...+........ .
T Consensus       152 ~~~~~----~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (299)
T 3g9x_A          152 FRTAD----VGRELIIDQNAFIEGALP-------KCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVA  220 (299)
T ss_dssp             HTSSS----HHHHHHTTSCHHHHTHHH-------HTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHH
T ss_pred             HcCCC----cchhhhccchhhHHHhhh-------hhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhh
Confidence            01000    000000000000000000       000000000000000000000000000 0000000000000000 0


Q ss_pred             hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          712 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       712 ~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ........+.++ ++|+|+++|++|..+|++.+..+.+.++.    +++++++++||.+.. +++++.+.|.+|+.+.
T Consensus       221 ~~~~~~~~l~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~  293 (299)
T 3g9x_A          221 LVEAYMNWLHQS-PVPKLLFWGTPGVLIPPAEAARLAESLPN----CKTVDIGPGLHYLQEDNPDLIGSEIARWLPAL  293 (299)
T ss_dssp             HHHHHHHHHHHC-CSCEEEEEEEECSSSCHHHHHHHHHHSTT----EEEEEEEEESSCHHHHCHHHHHHHHHHHSGGG
T ss_pred             hhhhhhhhcccC-CCCeEEEecCCCCCCCHHHHHHHHhhCCC----CeEEEeCCCCCcchhcCHHHHHHHHHHHHhhh
Confidence            001223446788 99999999999999999999988887754    488999999999887 8889999999987653

>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*

Probab=99.63  E-value=1.6e-14  Score=149.75  Aligned_cols=125  Identities=14%  Similarity=0.048  Sum_probs=85.0

Q ss_pred             EEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhh
Q psy463          472 YMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTL  551 (790)
Q Consensus       472 ~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~  551 (790)
                      ...+...+|.++++....+.        ..|.||++||+++... .    ..+ ..++...+|.|+++|+||+|.+....
T Consensus        16 ~~~~~~~~g~~l~~~~~g~~--------~g~~vvllHG~~~~~~-~----~~~-~~~~~~~~~~vi~~D~~G~G~S~~~~   81 (317)
T 1wm1_A           16 SGWLDTGDGHRIYWELSGNP--------NGKPAVFIHGGPGGGI-S----PHH-RQLFDPERYKVLLFDQRGCGRSRPHA   81 (317)
T ss_dssp             EEEEECSSSCEEEEEEEECT--------TSEEEEEECCTTTCCC-C----GGG-GGGSCTTTEEEEEECCTTSTTCBSTT
T ss_pred             eeEEEcCCCcEEEEEEcCCC--------CCCcEEEECCCCCccc-c----hhh-hhhccccCCeEEEECCCCCCCCCCCc
Confidence            44566668888887665332        1245889999876521 1    111 22333479999999999988654220


Q ss_pred             HhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          552 KYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       552 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                            ......+.++.+.+..+++.++   ..++.|+||||||.+++.+|.++|+ +++++|+.++..
T Consensus        82 ------~~~~~~~~~~~~dl~~l~~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~  140 (317)
T 1wm1_A           82 ------SLDNNTTWHLVADIERLREMAG---VEQWLVFGGSWGSTLALAYAQTHPE-RVSEMVLRGIFT  140 (317)
T ss_dssp             ------CCTTCSHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCC
T ss_pred             ------ccccccHHHHHHHHHHHHHHcC---CCcEEEEEeCHHHHHHHHHHHHCCh-heeeeeEeccCC
Confidence                  1112345666666666666443   5789999999999999999999985 899888887653

>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A

Probab=99.63  E-value=3e-15  Score=160.29  Aligned_cols=151  Identities=13%  Similarity=0.006  Sum_probs=93.4

Q ss_pred             EEEEEEcCC--C--cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccc--c----ccccchHHHHHhcCCeEEEEEc
Q psy463          471 EYMSVPIQP--N--MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVT--E----RFSVDWNLYLADNKDIVVAYID  540 (790)
Q Consensus       471 ~~~~~~~~d--g--~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~--~----~~~~~~~~~~~~~~G~~v~~~d  540 (790)
                      ..+.+.+.+  |  ..+.++++.|.+..  +.+++|+|+++||+++.....  .    ..........++++||.|+++|
T Consensus        47 ~~i~y~t~~~~g~~~~~~g~l~~P~~~~--~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D  124 (397)
T 3h2g_A           47 AEFTYATIGVEGEPATASGVLLIPGGER--CSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSD  124 (397)
T ss_dssp             EEEEEEEECTTSCEEEEEEEEEEEECTT--CCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEEC
T ss_pred             EEEEEEecCCCCCeEEEEEEEEeCCCCC--CCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEec
Confidence            344554433  4  46899999998754  467899999999988763210  0    0011222344445899999999


Q ss_pred             CCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh-cC----CCCceEEEEE
Q psy463          541 GRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA-LD----PSNVFKCGIS  615 (790)
Q Consensus       541 ~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~-~~----p~~~~~~~v~  615 (790)
                      +||+|.++...............+.|...++..+.++++..+..+|+|+||||||.+++.++. ..    +...+.+++.
T Consensus       125 ~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~  204 (397)
T 3h2g_A          125 YLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAP  204 (397)
T ss_dssp             CTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEE
T ss_pred             CCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEec
Confidence            999886532211000000001235555556566655455445679999999999999987762 11    1235778888


Q ss_pred             eCCCCCcc
Q psy463          616 VAPVTDWI  623 (790)
Q Consensus       616 ~~~~~~~~  623 (790)
                      .++..++.
T Consensus       205 ~~~~~~l~  212 (397)
T 3h2g_A          205 ISGPYALE  212 (397)
T ss_dssp             ESCCSSHH
T ss_pred             ccccccHH
Confidence            88877764

>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}

Probab=99.63  E-value=8.4e-15  Score=150.16  Aligned_cols=254  Identities=9%  Similarity=-0.049  Sum_probs=138.9

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG  560 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~  560 (790)
                      .++++....|.       ...|.||++||.+++   ...|..  ....+++.||.|+++|+||+|.+...-.      ..
T Consensus        33 ~~l~y~~~G~~-------~~g~~vvllHG~~~~---~~~w~~--~~~~L~~~g~rvia~Dl~G~G~S~~~~~------~~   94 (297)
T 2xt0_A           33 LRMHYVDEGPR-------DAEHTFLCLHGEPSW---SFLYRK--MLPVFTAAGGRVVAPDLFGFGRSDKPTD------DA   94 (297)
T ss_dssp             CCEEEEEESCT-------TCSCEEEEECCTTCC---GGGGTT--THHHHHHTTCEEEEECCTTSTTSCEESC------GG
T ss_pred             eEEEEEEccCC-------CCCCeEEEECCCCCc---ceeHHH--HHHHHHhCCcEEEEeCCCCCCCCCCCCC------cc
Confidence            88888776432       113679999999876   334442  2234555789999999999887653210      01


Q ss_pred             ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc-cc---cchhhhcCC
Q psy463          561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY-DT---IYSERYMGL  636 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~-~~---~~~~~~~g~  636 (790)
                      ...++++.+.+..+++.++   .+++.|+||||||.+++.+|.++|+ +++.+|+.++....... ..   .+.......
T Consensus        95 ~~~~~~~a~dl~~ll~~l~---~~~~~lvGhS~Gg~va~~~A~~~P~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~  170 (297)
T 2xt0_A           95 VYTFGFHRRSLLAFLDALQ---LERVTLVCQDWGGILGLTLPVDRPQ-LVDRLIVMNTALAVGLSPGKGFESWRDFVANS  170 (297)
T ss_dssp             GCCHHHHHHHHHHHHHHHT---CCSEEEEECHHHHHHHTTHHHHCTT-SEEEEEEESCCCCSSSCSCHHHHHHHHHHHTC
T ss_pred             cCCHHHHHHHHHHHHHHhC---CCCEEEEEECchHHHHHHHHHhChH-HhcEEEEECCCCCcccCCchhHHHHHHHhhcc
Confidence            1345566666666555333   4789999999999999999999986 88988888774311000 00   000000000


Q ss_pred             CCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcC--cch--hcccccCCC-CcCCcchhh
Q psy463          637 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD--IMF--QSQRYMGLP-TFEDNLEGY  711 (790)
Q Consensus       637 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~--~~~--~~~~~~~~~-~~~~~~~~~  711 (790)
                      +  .......        ...          +.  .....    .........-  ...  ....+.... .........
T Consensus       171 ~--~~~~~~~--------~~~----------~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (297)
T 2xt0_A          171 P--DLDVGKL--------MQR----------AI--PGITD----AEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAE  224 (297)
T ss_dssp             T--TCCHHHH--------HHH----------HS--TTCCH----HHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHH
T ss_pred             c--ccchhHH--------Hhc----------cC--ccCCH----HHHHHHhccccCcchhHHHHHHHHhCccccccchhh
Confidence            0  0000000        000          00  00000    0000000000  000  000000000 000000000


Q ss_pred             hhhhhhhhhh-ccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH
Q psy463          712 KIAALNNKVD-RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD  786 (790)
Q Consensus       712 ~~~~~~~~~~-~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~  786 (790)
                      ........+. ++ ++|+|+|+|++|..+| ..+..+.+.++..  ....+.++++||+++..++++.+.|.+||.
T Consensus       225 ~~~~~~~~l~~~i-~~P~Lvi~G~~D~~~~-~~~~~~~~~~p~~--~~~~~~~~~~GH~~~~~p~~~~~~i~~fl~  296 (297)
T 2xt0_A          225 IGRQAMSFWSTQW-SGPTFMAVGAQDPVLG-PEVMGMLRQAIRG--CPEPMIVEAGGHFVQEHGEPIARAALAAFG  296 (297)
T ss_dssp             HHHHHHHHHHHTC-CSCEEEEEETTCSSSS-HHHHHHHHHHSTT--CCCCEEETTCCSSGGGGCHHHHHHHHHHTT
T ss_pred             HHHHHHHHhhhcc-CCCeEEEEeCCCcccC-hHHHHHHHhCCCC--eeEEeccCCCCcCcccCHHHHHHHHHHHHh
Confidence            0112224567 89 9999999999999999 7788888877654  233344799999876567889999999985

>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*

Probab=99.63  E-value=4e-15  Score=151.28  Aligned_cols=262  Identities=13%  Similarity=0.082  Sum_probs=138.2

Q ss_pred             CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463          478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR  557 (790)
Q Consensus       478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~  557 (790)
                      .+|.++++..+        + .+ +.||++||.+++.   ..|..  ....++++||.|+++|+||+|.+....      
T Consensus        10 ~~g~~l~y~~~--------g-~~-~pvvllHG~~~~~---~~~~~--~~~~L~~~g~~vi~~D~~G~G~S~~~~------   68 (279)
T 1hkh_A           10 STPIELYYEDQ--------G-SG-QPVVLIHGYPLDG---HSWER--QTRELLAQGYRVITYDRRGFGGSSKVN------   68 (279)
T ss_dssp             TEEEEEEEEEE--------S-SS-EEEEEECCTTCCG---GGGHH--HHHHHHHTTEEEEEECCTTSTTSCCCS------
T ss_pred             CCCeEEEEEec--------C-CC-CcEEEEcCCCchh---hHHhh--hHHHHHhCCcEEEEeCCCCCCCCCCCC------
Confidence            35666765544        1 12 3488999988762   33432  233455579999999999988754321      


Q ss_pred             cCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          558 RLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       558 ~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                        ....+++..+.+..+++.   ++..++.++||||||.+++.++.++|+.+++++++.++.............   +.+
T Consensus        69 --~~~~~~~~~~dl~~~l~~---l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~---~~~  140 (279)
T 1hkh_A           69 --TGYDYDTFAADLHTVLET---LDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPE---GVP  140 (279)
T ss_dssp             --SCCSHHHHHHHHHHHHHH---HTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTT---SBC
T ss_pred             --CCCCHHHHHHHHHHHHHh---cCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcC---CCc
Confidence              113445555555555543   334789999999999999999999885488988888875332110000000   000


Q ss_pred             CccCchhhhhhc---cccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhh
Q psy463          638 TFEDNLEGYKIA---ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIA  714 (790)
Q Consensus       638 ~~~~~~~~~~~~---~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  714 (790)
                        ......+...   ........+. ...+-........+.........+.........          .......+ ..
T Consensus       141 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~-~~  206 (279)
T 1hkh_A          141 --QEVFDGIEAAAKGDRFAWFTDFY-KNFYNLDENLGSRISEQAVTGSWNVAIGSAPVA----------AYAVVPAW-IE  206 (279)
T ss_dssp             --HHHHHHHHHHHHHCHHHHHHHHH-HHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTH----------HHHTHHHH-TC
T ss_pred             --HHHHHHHHHHhhhhhhhhHHHHH-hhhhhcccCCcccccHHHHHhhhhhhccCcHHH----------HHHHHHHH-hh
Confidence              0000000000   0000000000 000000000000011111111111111111000          00000000 00


Q ss_pred             h---hhhhhhccCCccEEEEecCCCcccchhhh-HHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          715 A---LNNKVDRIRDKQYLLVHGTMDDNVHFQQS-MMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       715 ~---~~~~~~~i~~~P~Lii~G~~D~~v~~~~~-~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .   .+..+... ++|+|+++|++|..+|++.+ +.+.+.++.    ++++++++++|.+.. +++++.+.+.+||++
T Consensus       207 ~~~~~l~~i~~~-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~  279 (279)
T 1hkh_A          207 DFRSDVEAVRAA-GKPTLILHGTKDNILPIDATARRFHQAVPE----ADYVEVEGAPHGLLWTHADEVNAALKTFLAK  279 (279)
T ss_dssp             BCHHHHHHHHHH-CCCEEEEEETTCSSSCTTTTHHHHHHHCTT----SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred             chhhhHHHhccC-CCCEEEEEcCCCccCChHHHHHHHHHhCCC----eeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence            1   11222333 79999999999999999887 777766543    489999999999877 888999999999863

>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}

Probab=99.63  E-value=5.7e-16  Score=161.84  Aligned_cols=254  Identities=13%  Similarity=0.095  Sum_probs=142.5

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      ++.++.+..+.+         ..|+||++||.++..   ..    |... +...||.|+++|+||.|.+...       .
T Consensus        68 ~~~~~~~~~~g~---------~~~~vv~~hG~~~~~---~~----~~~~-~~~lg~~Vi~~D~~G~G~S~~~-------~  123 (330)
T 3p2m_A           68 QAGAISALRWGG---------SAPRVIFLHGGGQNA---HT----WDTV-IVGLGEPALAVDLPGHGHSAWR-------E  123 (330)
T ss_dssp             EETTEEEEEESS---------SCCSEEEECCTTCCG---GG----GHHH-HHHSCCCEEEECCTTSTTSCCC-------S
T ss_pred             cCceEEEEEeCC---------CCCeEEEECCCCCcc---ch----HHHH-HHHcCCeEEEEcCCCCCCCCCC-------C
Confidence            344566666532         236799999998763   22    2222 2335999999999998765421       1


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhh------
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSER------  632 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~------  632 (790)
                      ......++..+.+..+++.+   +.+++.|+||||||.+++.++.++|+ +++++++.+|..............      
T Consensus       124 ~~~~~~~~~a~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~  199 (330)
T 3p2m_A          124 DGNYSPQLNSETLAPVLREL---APGAEFVVGMSLGGLTAIRLAAMAPD-LVGELVLVDVTPSALQRHAELTAEQRGTVA  199 (330)
T ss_dssp             SCBCCHHHHHHHHHHHHHHS---STTCCEEEEETHHHHHHHHHHHHCTT-TCSEEEEESCCHHHHHHHHHHTCC------
T ss_pred             CCCCCHHHHHHHHHHHHHHh---CCCCcEEEEECHhHHHHHHHHHhChh-hcceEEEEcCCCccchhhhhhhhhhhhhhh
Confidence            12244666666666666643   35789999999999999999999985 889999888753321100000000      


Q ss_pred             hcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh
Q psy463          633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK  712 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  712 (790)
                      .+............        .....         .   ..+......+...+...........+...  +........
T Consensus       200 ~~~~~~~~~~~~~~--------~~~~~---------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  257 (330)
T 3p2m_A          200 LMHGEREFPSFQAM--------LDLTI---------A---AAPHRDVKSLRRGVFHNSRRLDNGNWVWR--YDAIRTFGD  257 (330)
T ss_dssp             -----CCBSCHHHH--------HHHHH---------H---HCTTSCHHHHHHHHHTTEEECSSSCEEES--SCCCSBCCC
T ss_pred             hhcCCccccCHHHH--------HHHHH---------h---cCCCCCHHHHHHHHHhcccccCCCceEEe--echhhCccc
Confidence            00000000000000        00000         0   00000011111111110000000000000  000000001


Q ss_pred             hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceE-EEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          713 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQ-SQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       713 ~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~-~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .......+.++ ++|+|+++|++|..+|++.++.+.+.++.    .+ +++++++||.+.. .++++.+.|.+||++
T Consensus       258 ~~~~~~~l~~i-~~PvLii~G~~D~~v~~~~~~~l~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~  329 (330)
T 3p2m_A          258 FAGLWDDVDAL-SAPITLVRGGSSGFVTDQDTAELHRRATH----FRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT  329 (330)
T ss_dssp             HHHHHHHHHHC-CSCEEEEEETTCCSSCHHHHHHHHHHCSS----EEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred             cHHHHHHHhhC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence            11123567788 99999999999999999999888887754    36 9999999999877 888999999999875

>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*

Probab=99.63  E-value=5e-15  Score=153.40  Aligned_cols=268  Identities=12%  Similarity=0.053  Sum_probs=145.7

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....+        ++.|.||++||++++   ...|..  ....++ .+|.|+++|+||+|.+...        
T Consensus        15 ~g~~l~y~~~G~--------g~~~pvvllHG~~~~---~~~w~~--~~~~L~-~~~~via~Dl~G~G~S~~~--------   72 (316)
T 3afi_E           15 LGSSMAYRETGA--------QDAPVVLFLHGNPTS---SHIWRN--ILPLVS-PVAHCIAPDLIGFGQSGKP--------   72 (316)
T ss_dssp             TTEEEEEEEESC--------TTSCEEEEECCTTCC---GGGGTT--THHHHT-TTSEEEEECCTTSTTSCCC--------
T ss_pred             CCEEEEEEEeCC--------CCCCeEEEECCCCCc---hHHHHH--HHHHHh-hCCEEEEECCCCCCCCCCC--------
Confidence            677888776522        222589999999887   334543  223444 4699999999998876432        


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC---ccccc---------
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD---WIYYD---------  626 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~---~~~~~---------  626 (790)
                      .....++++.+.+..+++.++   .+++.|+||||||.+++.+|.++|+ +++.+|+.++...   +....         
T Consensus        73 ~~~~~~~~~a~dl~~ll~~l~---~~~~~lvGhS~Gg~va~~~A~~~P~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~  148 (316)
T 3afi_E           73 DIAYRFFDHVRYLDAFIEQRG---VTSAYLVAQDWGTALAFHLAARRPD-FVRGLAFMEFIRPMPTWQDFHHTEVAEEQD  148 (316)
T ss_dssp             SSCCCHHHHHHHHHHHHHHTT---CCSEEEEEEEHHHHHHHHHHHHCTT-TEEEEEEEEECCCBSSGGGTTCCCCGGGHH
T ss_pred             CCCCCHHHHHHHHHHHHHHcC---CCCEEEEEeCccHHHHHHHHHHCHH-hhhheeeeccCCCcchhhhccchhhccccc
Confidence            012456777777777666444   4789999999999999999999986 8888888776432   11100         


Q ss_pred             --ccchh--hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          627 --TIYSE--RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       627 --~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                        .....  ..+..+  ......+..  .........  +     ..............+...+...........+....
T Consensus       149 ~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (316)
T 3afi_E          149 HAEAARAVFRKFRTP--GEGEAMILE--ANAFVERVL--P-----GGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPREL  217 (316)
T ss_dssp             HHHHHHHHHHHHTST--THHHHHHTT--SCHHHHTTT--G-----GGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGS
T ss_pred             cchhHHHHHHHhcCC--chhhHHHhc--cchHHHHhc--c-----cccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhc
Confidence              00000  000111  000000000  000000000  0     00000000000000000000000000000000000


Q ss_pred             CcCCc-chhh-hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHH
Q psy463          703 TFEDN-LEGY-KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYH  779 (790)
Q Consensus       703 ~~~~~-~~~~-~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~  779 (790)
                      ..... .... ........+.++ ++|+|+++|++|..+|+..++.+.+.++.    .+++++|++||.+.. .++++.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~l~~i-~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~----~~~~~i~~~GH~~~~e~p~~~~~  292 (316)
T 3afi_E          218 PIAGEPADVYEALQSAHAALAAS-SYPKLLFTGEPGALVSPEFAERFAASLTR----CALIRLGAGLHYLQEDHADAIGR  292 (316)
T ss_dssp             CBTTBSHHHHHHHHHHHHHHHHC-CSCEEEEEEEECSSSCHHHHHHHHHHSSS----EEEEEEEEECSCHHHHHHHHHHH
T ss_pred             cccccchhhhhHHHHHHHhhhcc-CCCeEEEecCCCCccCHHHHHHHHHhCCC----CeEEEcCCCCCCchhhCHHHHHH
Confidence            00000 0000 001112345678 99999999999999999888888777654    488999999999887 8899999


Q ss_pred             HHHHHHHHh
Q psy463          780 TLERFLDSC  788 (790)
Q Consensus       780 ~i~~fl~~~  788 (790)
                      .|.+||.+.
T Consensus       293 ~i~~fl~~~  301 (316)
T 3afi_E          293 SVAGWIAGI  301 (316)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhhc
Confidence            999999864

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.63  E-value=1.2e-14  Score=164.74  Aligned_cols=237  Identities=11%  Similarity=0.039  Sum_probs=152.6

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      .+|||||++|+|.+..++          .-+||.+  +++.      ..++|.+......-..|+|+ +  ++|.+....
T Consensus        27 ~~~~~DG~~la~~s~~~g----------~~~lw~~--~~g~------~~~lt~~~~~~~~~~~~spd-~--~l~~~~~~~   85 (582)
T 3o4h_A           27 LQGVVDGDKLLVVGFSEG----------SVNAYLY--DGGE------TVKLNREPINSVLDPHYGVG-R--VILVRDVSK   85 (582)
T ss_dssp             EEEEETTTEEEEEEEETT----------EEEEEEE--ETTE------EEECCSSCCSEECEECTTCS-E--EEEEEECST
T ss_pred             eecCCCCCeEEEEEccCC----------ceeEEEE--cCCC------cEeeecccccccccccCCCC-e--EEEEeccCC
Confidence            378999999999886443          2268875  4553      57788776433334577766 2  777665311


Q ss_pred             CCCCCCccccceeEEEec--CCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcc
Q psy463          194 SDGSTPVDSWDHLTFIDL--DDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNR  270 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~  270 (790)
                      .+      ....||.+++  +++.       .+++                 .... ....+|||||+ +++.+.... .
T Consensus        86 g~------~~~~l~~~~~~~~g~~-------~~l~-----------------~~~~-~~~~~~s~dg~~~~~~s~~~~-~  133 (582)
T 3o4h_A           86 GA------EQHALFKVNTSRPGEE-------QRLE-----------------AVKP-MRILSGVDTGEAVVFTGATED-R  133 (582)
T ss_dssp             TS------CCEEEEEEETTSTTCC-------EECT-----------------TSCS-BEEEEEEECSSCEEEEEECSS-C
T ss_pred             CC------cceEEEEEeccCCCcc-------cccc-----------------CCCC-ceeeeeCCCCCeEEEEecCCC-C
Confidence            11      1258999998  5543       2333                 2222 22569999998 444443332 2


Q ss_pred             eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463          271 ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  350 (790)
Q Consensus       271 ~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~  350 (790)
                        +.++++++|+++.++....        ..+.|||||+.|++...   +..+      ...||++|+++++      .+
T Consensus       134 --~~l~d~~~g~~~~l~~~~~--------~~~~~spDG~~la~~~~---~~~~------~~~i~~~d~~~g~------~~  188 (582)
T 3o4h_A          134 --VALYALDGGGLRELARLPG--------FGFVSDIRGDLIAGLGF---FGGG------RVSLFTSNLSSGG------LR  188 (582)
T ss_dssp             --EEEEEEETTEEEEEEEESS--------CEEEEEEETTEEEEEEE---EETT------EEEEEEEETTTCC------CE
T ss_pred             --ceEEEccCCcEEEeecCCC--------ceEEECCCCCEEEEEEE---cCCC------CeEEEEEcCCCCC------ce
Confidence              3366888999888886542        37999999999996554   2223      3579999999988      78


Q ss_pred             cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccE--------EEEEEec
Q psy463          351 PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSY--------SGATFST  422 (790)
Q Consensus       351 ~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~--------~~~~~s~  422 (790)
                      .|+.+...+.. ++|||||+.|+.....+.   .+||++++++  ++.+ ++..      ....+        ....|||
T Consensus       189 ~l~~~~~~~~~-~~~SpDG~~l~~~~~~~~---~~i~~~d~~~--~~~~-~~~~------~~~~~~~~~~~~~~~~~~sp  255 (582)
T 3o4h_A          189 VFDSGEGSFSS-ASISPGMKVTAGLETARE---ARLVTVDPRD--GSVE-DLEL------PSKDFSSYRPTAITWLGYLP  255 (582)
T ss_dssp             EECCSSCEEEE-EEECTTSCEEEEEECSSC---EEEEEECTTT--CCEE-ECCC------SCSHHHHHCCSEEEEEEECT
T ss_pred             EeecCCCcccc-ceECCCCCEEEEccCCCe---eEEEEEcCCC--CcEE-EccC------CCcChhhhhhccccceeEcC
Confidence            88877655544 899999999983333233   7899999987  5555 3321      12222        2344999


Q ss_pred             CCcEEEEEeecCCCCeEEEEec
Q psy463          423 NVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       423 dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                      || .++++....+  .+.++++
T Consensus       256 dg-~~~~~~~~~g--~~~l~~~  274 (582)
T 3o4h_A          256 DG-RLAVVARREG--RSAVFID  274 (582)
T ss_dssp             TS-CEEEEEEETT--EEEEEET
T ss_pred             CC-cEEEEEEcCC--cEEEEEE
Confidence            99 6667665554  3445555

>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A

Probab=99.62  E-value=3e-15  Score=149.92  Aligned_cols=232  Identities=14%  Similarity=0.099  Sum_probs=128.3

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|.||++||.+++.   ..|.  .....++ ..|.|+++|+||+|.+....         ...+.+..+.+..+++.++ 
T Consensus        16 ~~~vvllHG~~~~~---~~w~--~~~~~L~-~~~~via~Dl~G~G~S~~~~---------~~~~~~~a~dl~~~l~~l~-   79 (255)
T 3bf7_A           16 NSPIVLVHGLFGSL---DNLG--VLARDLV-NDHNIIQVDVRNHGLSPREP---------VMNYPAMAQDLVDTLDALQ-   79 (255)
T ss_dssp             CCCEEEECCTTCCT---TTTH--HHHHHHT-TTSCEEEECCTTSTTSCCCS---------CCCHHHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEcCCcccH---hHHH--HHHHHHH-hhCcEEEecCCCCCCCCCCC---------CcCHHHHHHHHHHHHHHcC-
Confidence            46789999998763   3343  2233455 35999999999987654320         1234454444444444233 


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhcccc--chhh-h
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALN--NKVD-R  657 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~-~  657 (790)
                        .+++.|+||||||.+++.++.++|+ +++.+|+.++....... ..+...+ .      ...........  .... .
T Consensus        80 --~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lvl~~~~p~~~~~-~~~~~~~-~------~~~~~~~~~~~~~~~~~~~  148 (255)
T 3bf7_A           80 --IDKATFIGHSMGGKAVMALTALAPD-RIDKLVAIDIAPVDYHV-RRHDEIF-A------AINAVSESDAQTRQQAAAI  148 (255)
T ss_dssp             --CSCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCSSCCCS-CCCHHHH-H------HHHHHHHSCCCSHHHHHHH
T ss_pred             --CCCeeEEeeCccHHHHHHHHHhCcH-hhccEEEEcCCcccCCc-ccHHHHH-H------HHHhccccccccHHHHHHH
Confidence              4689999999999999999999986 88888876532111000 0000000 0      00000000000  0000 0


Q ss_pred             ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch----hhhhhhhhhhhhccCCccEEEEec
Q psy463          658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE----GYKIAALNNKVDRIRDKQYLLVHG  733 (790)
Q Consensus       658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~P~Lii~G  733 (790)
                      +.            ...+..   .....+.. ...      ..  .+.....    .+........+.++ ++|+|+++|
T Consensus       149 ~~------------~~~~~~---~~~~~~~~-~~~------~~--~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~l~i~G  203 (255)
T 3bf7_A          149 MR------------QHLNEE---GVIQFLLK-SFV------DG--EWRFNVPVLWDQYPHIVGWEKIPAW-DHPALFIPG  203 (255)
T ss_dssp             HT------------TTCCCH---HHHHHHHT-TEE------TT--EESSCHHHHHHTHHHHHCCCCCCCC-CSCEEEECB
T ss_pred             Hh------------hhcchh---HHHHHHHH-hcc------CC--ceeecHHHHHhhhhhcccccccccc-CCCeEEEEC
Confidence            00            000000   00000000 000      00  0000000    00000000124577 999999999


Q ss_pred             CCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          734 TMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       734 ~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ++|..++++.++.+.+.++.    ++++++|++||.+.. .++.+.+.+.+||.+|
T Consensus       204 ~~D~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~  255 (255)
T 3bf7_A          204 GNSPYVSEQYRDDLLAQFPQ----ARAHVIAGAGHWVHAEKPDAVLRAIRRYLNDH  255 (255)
T ss_dssp             TTCSTTCGGGHHHHHHHCTT----EEECCBTTCCSCHHHHCHHHHHHHHHHHHHTC
T ss_pred             CCCCCCCHHHHHHHHHHCCC----CeEEEeCCCCCccccCCHHHHHHHHHHHHhcC
Confidence            99999999888888776653    589999999999887 8889999999999865

>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}

Probab=99.62  E-value=1.2e-14  Score=148.63  Aligned_cols=253  Identities=13%  Similarity=0.063  Sum_probs=139.0

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG  560 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~  560 (790)
                      .++++....        . +.|.||++||.+.+......|... ....++ .+|.|+++|+||+|.+.....       .
T Consensus        25 ~~l~y~~~g--------~-g~~~vvllHG~~~~~~~~~~~~~~-~~~~l~-~~~~vi~~D~~G~G~S~~~~~-------~   86 (289)
T 1u2e_A           25 LRIHFNDCG--------Q-GDETVVLLHGSGPGATGWANFSRN-IDPLVE-AGYRVILLDCPGWGKSDSVVN-------S   86 (289)
T ss_dssp             EEEEEEEEC--------C-CSSEEEEECCCSTTCCHHHHTTTT-HHHHHH-TTCEEEEECCTTSTTSCCCCC-------S
T ss_pred             EEEEEeccC--------C-CCceEEEECCCCcccchhHHHHHh-hhHHHh-cCCeEEEEcCCCCCCCCCCCc-------c
Confidence            677766541        1 223899999975211112233322 213344 459999999999876543210       0


Q ss_pred             ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc-ccc-c--chhh---h
Q psy463          561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY-YDT-I--YSER---Y  633 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~-~~~-~--~~~~---~  633 (790)
                      ...+++..+.+..+++.++   ..++.|+||||||.+++.++.++|+ +++++|+.++...... +.. .  ....   .
T Consensus        87 ~~~~~~~~~~l~~~l~~l~---~~~~~lvGhS~GG~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~  162 (289)
T 1u2e_A           87 GSRSDLNARILKSVVDQLD---IAKIHLLGNSMGGHSSVAFTLKWPE-RVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQL  162 (289)
T ss_dssp             SCHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHhC---CCceEEEEECHhHHHHHHHHHHCHH-hhhEEEEECCCccccccccccchhhHHHHHHH
Confidence            2346666666666666443   4789999999999999999999985 8898888887542110 000 0  0000   0


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcch-h-cc-cccCCCCcCCcchh
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF-Q-SQ-RYMGLPTFEDNLEG  710 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~-~-~~-~~~~~~~~~~~~~~  710 (790)
                      +..+    ......     .....+...         .................. .... . .. .+...+.       
T Consensus       163 ~~~~----~~~~~~-----~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------  216 (289)
T 1u2e_A          163 YRQP----TIENLK-----LMMDIFVFD---------TSDLTDALFEARLNNMLS-RRDHLENFVKSLEANPK-------  216 (289)
T ss_dssp             HHSC----CHHHHH-----HHHHTTSSC---------TTSCCHHHHHHHHHHHHH-THHHHHHHHHHHHHCSC-------
T ss_pred             Hhcc----hHHHHH-----HHHHHhhcC---------cccCCHHHHHHHHHHhhc-ChhHHHHHHHHHHhccc-------
Confidence            0000    000000     000000000         000000000000000000 0000 0 00 0000000       


Q ss_pred             hhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          711 YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       711 ~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                       ........+.++ ++|+|+++|++|..+|++.++.+.+.++.    .+++++|++||.... .++++.+.+.+||.+
T Consensus       217 -~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~  288 (289)
T 1u2e_A          217 -QFPDFGPRLAEI-KAQTLIVWGRNDRFVPMDAGLRLLSGIAG----SELHIFRDCGHWAQWEHADAFNQLVLNFLAR  288 (289)
T ss_dssp             -CSCCCGGGGGGC-CSCEEEEEETTCSSSCTHHHHHHHHHSTT----CEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred             -cccchhhHHhhc-CCCeEEEeeCCCCccCHHHHHHHHhhCCC----cEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence             000112456788 99999999999999999999988887754    488999999999876 788899999999863

>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*

Probab=99.62  E-value=2.4e-14  Score=144.11  Aligned_cols=247  Identities=15%  Similarity=0.127  Sum_probs=131.5

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      +..|.||++||.+++   ...|.  .....++++||.|+++|+||+|.+.....       ....+++..+.+..+++.+
T Consensus         8 ~~g~~vvllHG~~~~---~~~w~--~~~~~L~~~g~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l   75 (264)
T 2wfl_A            8 KQQKHFVLVHGGCLG---AWIWY--KLKPLLESAGHKVTAVDLSAAGINPRRLD-------EIHTFRDYSEPLMEVMASI   75 (264)
T ss_dssp             -CCCEEEEECCTTCC---GGGGT--THHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHHHHHHHHHHHS
T ss_pred             CCCCeEEEECCCccc---cchHH--HHHHHHHhCCCEEEEeecCCCCCCCCCcc-------cccCHHHHHHHHHHHHHHh
Confidence            345789999999765   22343  23344544799999999999887543210       1134566666666666544


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccchhhhcC-CCCccCchhhhhhccccchhh
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIYSERYMG-LPTFEDNLEGYKIAALNNKVD  656 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~  656 (790)
                      +  ...++.|+||||||.+++.++.++|+ +++.+|+.++........ ......+.. .+     ...+..... ....
T Consensus        76 ~--~~~~~~lvGhSmGG~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~  146 (264)
T 2wfl_A           76 P--PDEKVVLLGHSFGGMSLGLAMETYPE-KISVAVFMSAMMPDPNHSLTYPFEKYNEKCP-----ADMMLDSQF-STYG  146 (264)
T ss_dssp             C--TTCCEEEEEETTHHHHHHHHHHHCGG-GEEEEEEESSCCCCTTSCTTHHHHHHHHHSC-----TTTTTTCEE-EEES
T ss_pred             C--CCCCeEEEEeChHHHHHHHHHHhChh-hhceeEEEeeccCCCCcchhhHHHHhhhcCc-----chhhhhhhh-hhcc
Confidence            3  13689999999999999999999986 888888887642111000 000000000 00     000000000 0000


Q ss_pred             hccCCcEEEEeec------CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEE
Q psy463          657 RIRDKQYLLVHGT------MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLL  730 (790)
Q Consensus       657 ~~~~~p~l~~~g~------~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Li  730 (790)
                      .....+.......      .-...+ .....+...+......           +  . ............... ++|+|+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~--~-~~~~~~~~~~~~~~~-~~P~l~  210 (264)
T 2wfl_A          147 NPENPGMSMILGPQFMALKMFQNCS-VEDLELAKMLTRPGSL-----------F--F-QDLAKAKKFSTERYG-SVKRAY  210 (264)
T ss_dssp             CTTSCEEEEECCHHHHHHHTSTTSC-HHHHHHHHHHCCCEEC-----------C--H-HHHTTSCCCCTTTGG-GSCEEE
T ss_pred             CCCCCcchhhhhHHHHHHHHhcCCC-HHHHHHHHhccCCCcc-----------c--c-cccccccccChHHhC-CCCeEE
Confidence            0000000000000      000000 0001111111000000           0  0 000000000000113 689999


Q ss_pred             EecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          731 VHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       731 i~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      ++|++|..+|+..++.+.+.++..    +++++|++||..+. .++++.+.+.+|+.
T Consensus       211 i~G~~D~~~~~~~~~~~~~~~p~~----~~~~i~~~gH~~~~e~P~~~~~~l~~f~~  263 (264)
T 2wfl_A          211 IFCNEDKSFPVEFQKWFVESVGAD----KVKEIKEADHMGMLSQPREVCKCLLDISD  263 (264)
T ss_dssp             EEETTCSSSCHHHHHHHHHHHCCS----EEEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred             EEeCCcCCCCHHHHHHHHHhCCCc----eEEEeCCCCCchhhcCHHHHHHHHHHHhh
Confidence            999999999999998888887643    88999999999987 88999999999975

>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7

Probab=99.62  E-value=3.2e-14  Score=147.25  Aligned_cols=126  Identities=15%  Similarity=0.098  Sum_probs=85.7

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +...+...+|..+++....+.        ..|.||++||++++.. .    ..+ ..++...+|.|+++|+||+|.+...
T Consensus        12 ~~~~~~~~~g~~l~y~~~G~~--------~g~pvvllHG~~~~~~-~----~~~-~~~~~~~~~~vi~~D~~G~G~S~~~   77 (313)
T 1azw_A           12 QQGSLKVDDRHTLYFEQCGNP--------HGKPVVMLHGGPGGGC-N----DKM-RRFHDPAKYRIVLFDQRGSGRSTPH   77 (313)
T ss_dssp             EEEEEECSSSCEEEEEEEECT--------TSEEEEEECSTTTTCC-C----GGG-GGGSCTTTEEEEEECCTTSTTSBST
T ss_pred             ccceEEcCCCCEEEEEecCCC--------CCCeEEEECCCCCccc-c----HHH-HHhcCcCcceEEEECCCCCcCCCCC
Confidence            344566668888887766432        1255889999876521 1    111 2233347999999999998876422


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                         .   ......+.++.+.+..+++.++   ..++.|+||||||.+++.++.++|+ +++++|+.++..
T Consensus        78 ---~---~~~~~~~~~~~~dl~~l~~~l~---~~~~~lvGhSmGg~ia~~~a~~~p~-~v~~lvl~~~~~  137 (313)
T 1azw_A           78 ---A---DLVDNTTWDLVADIERLRTHLG---VDRWQVFGGSWGSTLALAYAQTHPQ-QVTELVLRGIFL  137 (313)
T ss_dssp             ---T---CCTTCCHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCC
T ss_pred             ---c---ccccccHHHHHHHHHHHHHHhC---CCceEEEEECHHHHHHHHHHHhChh-heeEEEEecccc
Confidence               0   1112345666666666666444   4689999999999999999999985 889888887653

>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*

Probab=99.62  E-value=4.7e-15  Score=161.57  Aligned_cols=68  Identities=15%  Similarity=0.253  Sum_probs=58.2

Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcC-CCCCcCCC-cchHHHHHHHHHHHHhhC
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYP-DEEHGLIG-VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p-~~~H~~~~-~~~~~~~~i~~fl~~~l~  790 (790)
                      ..+.++ ++|+|+++|++|..+|++.++.+.+.++.    +++++++ ++||.+.. .++++.+.|.+||+++++
T Consensus       375 ~~l~~i-~~PvLvi~G~~D~~~p~~~~~~l~~~~p~----~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~l~  444 (444)
T 2vat_A          375 EALAMI-TQPALIICARSDGLYSFDEHVEMGRSIPN----SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQSLM  444 (444)
T ss_dssp             HHHTTC-CSCEEEEECTTCSSSCHHHHHHHHHHSTT----EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC---
T ss_pred             HHhhcC-CCCEEEEEeCCCCCCCHHHHHHHHHHCCC----cEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHhcC
Confidence            557788 99999999999999999999988888764    4899999 89999887 888999999999988763

>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}

Probab=99.61  E-value=1.2e-14  Score=146.90  Aligned_cols=249  Identities=11%  Similarity=0.045  Sum_probs=134.2

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |.||++||.+++   ...|.. .. ..++ .+|.|+++|+||+|.+.....       ....++++.+.+..+++.   +
T Consensus        17 ~~vvllHG~~~~---~~~~~~-~~-~~L~-~~~~vi~~Dl~G~G~S~~~~~-------~~~~~~~~~~dl~~~l~~---l   80 (269)
T 2xmz_A           17 QVLVFLHGFLSD---SRTYHN-HI-EKFT-DNYHVITIDLPGHGEDQSSMD-------ETWNFDYITTLLDRILDK---Y   80 (269)
T ss_dssp             EEEEEECCTTCC---GGGGTT-TH-HHHH-TTSEEEEECCTTSTTCCCCTT-------SCCCHHHHHHHHHHHHGG---G
T ss_pred             CeEEEEcCCCCc---HHHHHH-HH-HHHh-hcCeEEEecCCCCCCCCCCCC-------CccCHHHHHHHHHHHHHH---c
Confidence            459999999887   334543 23 3344 359999999999876543210       023466666666666653   3


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCC
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDK  661 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  661 (790)
                      +.+++.++||||||.+++.++.++|+ +++++|+.++.......... ..+.+..+   .....+...............
T Consensus        81 ~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  155 (269)
T 2xmz_A           81 KDKSITLFGYSMGGRVALYYAINGHI-PISNLILESTSPGIKEEANQ-LERRLVDD---ARAKVLDIAGIELFVNDWEKL  155 (269)
T ss_dssp             TTSEEEEEEETHHHHHHHHHHHHCSS-CCSEEEEESCCSCCSSHHHH-HHHHHHHH---HHHHHHHHHCHHHHHHHHTTS
T ss_pred             CCCcEEEEEECchHHHHHHHHHhCch-heeeeEEEcCCcccCCchhH-HHHhhhhh---HHHHhhccccHHHHHHHHHhC
Confidence            45799999999999999999999986 88888888875432110000 00000000   000000000000000101000


Q ss_pred             cEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccch
Q psy463          662 QYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHF  741 (790)
Q Consensus       662 p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~  741 (790)
                      +.+  ..  ....+......+...............+...       ...........+.++ ++|+|+++|++|..++.
T Consensus       156 ~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~  223 (269)
T 2xmz_A          156 PLF--QS--QLELPVEIQHQIRQQRLSQSPHKMAKALRDY-------GTGQMPNLWPRLKEI-KVPTLILAGEYDEKFVQ  223 (269)
T ss_dssp             GGG--GG--GGGSCHHHHHHHHHHHHTSCHHHHHHHHHHH-------STTTSCCCGGGGGGC-CSCEEEEEETTCHHHHH
T ss_pred             ccc--cc--cccCCHHHHHHHHHHHhccCcHHHHHHHHHH-------HhccCccHHHHHHhc-CCCEEEEEeCCCcccCH
Confidence            000  00  0000111111111111111100000000000       000001112456788 99999999999999987


Q ss_pred             hhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          742 QQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       742 ~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      .... +.+.++    .+++++++++||.+.. .++++.+.+.+||++.
T Consensus       224 ~~~~-~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~  266 (269)
T 2xmz_A          224 IAKK-MANLIP----NSKCKLISATGHTIHVEDSDEFDTMILGFLKEE  266 (269)
T ss_dssp             HHHH-HHHHST----TEEEEEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHhhCC----CcEEEEeCCCCCChhhcCHHHHHHHHHHHHHHh
Confidence            7644 555443    3599999999999887 8889999999999864

>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*

Probab=99.61  E-value=1.3e-14  Score=146.84  Aligned_cols=247  Identities=15%  Similarity=0.095  Sum_probs=133.4

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|.||++||.+++   ...|..  ....+++.||.|+++|+||+|.+.....       ....+++..+.+..+++.++ 
T Consensus         4 ~~~vvllHG~~~~---~~~w~~--~~~~L~~~g~rVia~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l~-   70 (273)
T 1xkl_A            4 GKHFVLVHGACHG---GWSWYK--LKPLLEAAGHKVTALDLAASGTDLRKIE-------ELRTLYDYTLPLMELMESLS-   70 (273)
T ss_dssp             CCEEEEECCTTCC---GGGGTT--HHHHHHHTTCEEEECCCTTSTTCCCCGG-------GCCSHHHHHHHHHHHHHTSC-
T ss_pred             CCeEEEECCCCCC---cchHHH--HHHHHHhCCCEEEEecCCCCCCCccCcc-------cccCHHHHHHHHHHHHHHhc-
Confidence            3679999999865   233432  3344544799999999999876543210       11346666666666666333 


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccchhhhcC-CCCccCchhhhhhccccchhhhc
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIYSERYMG-LPTFEDNLEGYKIAALNNKVDRI  658 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~  658 (790)
                       ...++.|+||||||.+++.++.++|+ +++.+|+.++........ ......+.. .+     ...+....... ....
T Consensus        71 -~~~~~~lvGhSmGG~va~~~a~~~P~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~  142 (273)
T 1xkl_A           71 -ADEKVILVGHSLGGMNLGLAMEKYPQ-KIYAAVFLAAFMPDSVHNSSFVLEQYNERTP-----AENWLDTQFLP-YGSP  142 (273)
T ss_dssp             -SSSCEEEEEETTHHHHHHHHHHHCGG-GEEEEEEESCCCCCSSSCTTHHHHHHHHTSC-----TTTTTTCEEEE-CSCT
T ss_pred             -cCCCEEEEecCHHHHHHHHHHHhChH-hheEEEEEeccCCCCCCcHHHHHHHhhccCC-----hhhHHHHHHhh-ccCC
Confidence             13689999999999999999999986 888888887642111000 000000000 00     00000000000 0000


Q ss_pred             cCCcEEEEeec------CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEe
Q psy463          659 RDKQYLLVHGT------MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH  732 (790)
Q Consensus       659 ~~~p~l~~~g~------~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~  732 (790)
                      ...+.......      .....+. ....+...+.....           .+   ................ ++|+|+|+
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------~~---~~~~~~~~~~~~~~~~-~~P~l~i~  206 (273)
T 1xkl_A          143 EEPLTSMFFGPKFLAHKLYQLCSP-EDLALASSLVRPSS-----------LF---MEDLSKAKYFTDERFG-SVKRVYIV  206 (273)
T ss_dssp             TSCCEEEECCHHHHHHHTSTTSCH-HHHHHHHHHCCCBC-----------CC---HHHHHHCCCCCTTTGG-GSCEEEEE
T ss_pred             CCCccccccCHHHHHHHhhccCCH-HHHHHHHHhcCCCc-----------hh---hhhhhcccccchhhhC-CCCeEEEE
Confidence            00000000000      0000000 00111111100000           00   0000000000001113 68999999


Q ss_pred             cCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          733 GTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       733 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      |++|..+|+..++.+.+.++..    +++++|++||..+. .++++.+.+.+|+++.
T Consensus       207 G~~D~~~p~~~~~~~~~~~p~~----~~~~i~~aGH~~~~e~P~~~~~~i~~fl~~~  259 (273)
T 1xkl_A          207 CTEDKGIPEEFQRWQIDNIGVT----EAIEIKGADHMAMLCEPQKLCASLLEIAHKY  259 (273)
T ss_dssp             ETTCTTTTHHHHHHHHHHHCCS----EEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred             eCCccCCCHHHHHHHHHhCCCC----eEEEeCCCCCCchhcCHHHHHHHHHHHHHHh
Confidence            9999999999998888877643    88999999999987 8899999999999764

>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A

Probab=99.61  E-value=2.7e-15  Score=153.19  Aligned_cols=261  Identities=10%  Similarity=0.030  Sum_probs=137.2

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccch---HHHHHhcCCeEEEEEcCCCCCCChhhhHhhh
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDW---NLYLADNKDIVVAYIDGRNSALKGNTLKYAG  555 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~---~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~  555 (790)
                      +|.++++....+.      ....|+||++||.+++..  ..|...|   ....++ .+|.|+++|+||+|.+.....   
T Consensus        19 ~~~~l~y~~~G~~------~~~~p~vvllHG~~~~~~--~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~s~~~~~---   86 (286)
T 2qmq_A           19 PYGSVTFTVYGTP------KPKRPAIFTYHDVGLNYK--SCFQPLFRFGDMQEII-QNFVRVHVDAPGMEEGAPVFP---   86 (286)
T ss_dssp             TTEEEEEEEESCC------CTTCCEEEEECCTTCCHH--HHHHHHHTSHHHHHHH-TTSCEEEEECTTTSTTCCCCC---
T ss_pred             CCeEEEEEeccCC------CCCCCeEEEeCCCCCCch--hhhhhhhhhchhHHHh-cCCCEEEecCCCCCCCCCCCC---
Confidence            6788888776442      124588999999987631  1122111   234455 479999999999764322110   


Q ss_pred             hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcC
Q psy463          556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMG  635 (790)
Q Consensus       556 ~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g  635 (790)
                       .......+++..+.+..+++.+   +..++.|+||||||.+++.++.++|. +++++++.+|.................
T Consensus        87 -~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~  161 (286)
T 2qmq_A           87 -LGYQYPSLDQLADMIPCILQYL---NFSTIIGVGVGAGAYILSRYALNHPD-TVEGLVLINIDPNAKGWMDWAAHKLTG  161 (286)
T ss_dssp             -TTCCCCCHHHHHHTHHHHHHHH---TCCCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCCCCCCHHHHHHHHHHH
T ss_pred             -CCCCccCHHHHHHHHHHHHHHh---CCCcEEEEEEChHHHHHHHHHHhChh-heeeEEEECCCCcccchhhhhhhhhcc
Confidence             0111124556655555555532   34689999999999999999998885 899999998865332111000000000


Q ss_pred             CCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhh
Q psy463          636 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAA  715 (790)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  715 (790)
                      ..  ......+.        ..+....      .  ..........+...+...........+...      ........
T Consensus       162 ~~--~~~~~~~~--------~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  217 (286)
T 2qmq_A          162 LT--SSIPDMIL--------GHLFSQE------E--LSGNSELIQKYRGIIQHAPNLENIELYWNS------YNNRRDLN  217 (286)
T ss_dssp             TT--SCHHHHHH--------HHHSCHH------H--HHTTCHHHHHHHHHHHTCTTHHHHHHHHHH------HHTCCCCC
T ss_pred             cc--ccchHHHH--------HHHhcCC------C--CCcchHHHHHHHHHHHhcCCcchHHHHHHH------Hhhhhhhh
Confidence            00  00000000        0000000      0  000000011111111110000000000000      00000000


Q ss_pred             -hhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCC-ceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          716 -LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       716 -~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                       ....+.++ ++|+|+++|++|..+| ..    .+.+.+... .++++++|++||.+.. .++++.+.+.+||+
T Consensus       218 ~~~~~l~~i-~~P~lii~G~~D~~~~-~~----~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~  285 (286)
T 2qmq_A          218 FERGGETTL-KCPVMLVVGDQAPHED-AV----VECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ  285 (286)
T ss_dssp             SEETTEECC-CSCEEEEEETTSTTHH-HH----HHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred             hhhchhccC-CCCEEEEecCCCcccc-HH----HHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence             01345678 9999999999999988 22    233333333 4799999999999876 78899999999985

>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...

Probab=99.61  E-value=1.5e-14  Score=144.81  Aligned_cols=244  Identities=12%  Similarity=-0.010  Sum_probs=131.1

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |.||++||.+.+   ...|.  .....+++.||.|+++|+||+|.+.....       ....+++..+.+..+++.++  
T Consensus         4 ~~vvllHG~~~~---~~~w~--~~~~~L~~~g~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l~--   69 (257)
T 3c6x_A            4 AHFVLIHTICHG---AWIWH--KLKPLLEALGHKVTALDLAASGVDPRQIE-------EIGSFDEYSEPLLTFLEALP--   69 (257)
T ss_dssp             CEEEEECCTTCC---GGGGT--THHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHTHHHHHHHHTSC--
T ss_pred             CcEEEEcCCccC---cCCHH--HHHHHHHhCCCEEEEeCCCCCCCCCCCcc-------cccCHHHHHHHHHHHHHhcc--
Confidence            579999998765   23343  23344545799999999999887543210       01345666666666666332  


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc-cccchhhhcC-CCCccCchhhhhhccccchhhhcc
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY-DTIYSERYMG-LPTFEDNLEGYKIAALNNKVDRIR  659 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~-~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~  659 (790)
                      ...++.|+||||||.+++.++.++|+ +++.+|..++....... .......... .+       .+... .........
T Consensus        70 ~~~~~~lvGhSmGG~va~~~a~~~p~-~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~  140 (257)
T 3c6x_A           70 PGEKVILVGESCGGLNIAIAADKYCE-KIAAAVFHNSVLPDTEHCPSYVVDKLMEVFP-------DWKDT-TYFTYTKDG  140 (257)
T ss_dssp             TTCCEEEEEEETHHHHHHHHHHHHGG-GEEEEEEEEECCCCSSSCTTHHHHHHHHHSC-------CCTTC-EEEEEEETT
T ss_pred             ccCCeEEEEECcchHHHHHHHHhCch-hhheEEEEecccCCCCCcchhHHHHHhhcCc-------chhhh-hhhhccCCC
Confidence            13689999999999999999999986 88888877764211000 0000000000 00       00000 000000000


Q ss_pred             CCcEEEEeec------CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEec
Q psy463          660 DKQYLLVHGT------MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHG  733 (790)
Q Consensus       660 ~~p~l~~~g~------~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G  733 (790)
                      ..+.......      .-...+. ........+..  ..         .  ... ............... ++|+|+++|
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~---------~--~~~-~~~~~~~~~~~~~~~-~~P~l~i~G  204 (257)
T 3c6x_A          141 KEITGLKLGFTLLRENLYTLCGP-EEYELAKMLTR--KG---------S--LFQ-NILAKRPFFTKEGYG-SIKKIYVWT  204 (257)
T ss_dssp             EEEEEEECCHHHHHHHTSTTSCH-HHHHHHHHHCC--CB---------C--CCH-HHHHHSCCCCTTTGG-GSCEEEEEC
T ss_pred             CccccccccHHHHHHHHhcCCCH-HHHHHHHHhcC--CC---------c--cch-hhhccccccChhhcC-cccEEEEEe
Confidence            0000000000      0000000 00111111000  00         0  000 000000000001112 689999999


Q ss_pred             CCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          734 TMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       734 ~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ++|..+|+..++.+.+.++.    .+++++|++||..+. .++++.+.+.+|++++
T Consensus       205 ~~D~~~p~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~~  256 (257)
T 3c6x_A          205 DQDEIFLPEFQLWQIENYKP----DKVYKVEGGDHKLQLTKTKEIAEILQEVADTY  256 (257)
T ss_dssp             TTCSSSCHHHHHHHHHHSCC----SEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred             CCCcccCHHHHHHHHHHCCC----CeEEEeCCCCCCcccCCHHHHHHHHHHHHHhc
Confidence            99999999998888887653    489999999999987 8999999999999763

>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*

Probab=99.61  E-value=2.5e-14  Score=149.13  Aligned_cols=120  Identities=10%  Similarity=0.123  Sum_probs=79.7

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++...        +  ..|.||++||.+++.   ..|.  .....+++.||.|+++|+||+|.+.....    ..
T Consensus        19 ~g~~l~y~~~--------G--~g~~vvllHG~~~~~---~~w~--~~~~~L~~~g~~via~Dl~G~G~S~~~~~----~~   79 (328)
T 2cjp_A           19 NGLNMHLAEL--------G--EGPTILFIHGFPELW---YSWR--HQMVYLAERGYRAVAPDLRGYGDTTGAPL----ND   79 (328)
T ss_dssp             TTEEEEEEEE--------C--SSSEEEEECCTTCCG---GGGH--HHHHHHHTTTCEEEEECCTTSTTCBCCCT----TC
T ss_pred             CCcEEEEEEc--------C--CCCEEEEECCCCCch---HHHH--HHHHHHHHCCcEEEEECCCCCCCCCCcCc----CC
Confidence            7888887754        2  136899999998762   2333  22334555799999999999887543200    00


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      .....+++..+.+..+++.++. +..++.|+||||||.+++.+|.++|+ +++++++.++.
T Consensus        80 ~~~~~~~~~a~dl~~~l~~l~~-~~~~~~lvGhS~Gg~ia~~~A~~~p~-~v~~lvl~~~~  138 (328)
T 2cjp_A           80 PSKFSILHLVGDVVALLEAIAP-NEEKVFVVAHDWGALIAWHLCLFRPD-KVKALVNLSVH  138 (328)
T ss_dssp             GGGGSHHHHHHHHHHHHHHHCT-TCSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCC
T ss_pred             cccccHHHHHHHHHHHHHHhcC-CCCCeEEEEECHHHHHHHHHHHhChh-heeEEEEEccC
Confidence            0112344555445444443221 25789999999999999999999986 88988887754

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.60  E-value=2.9e-14  Score=164.29  Aligned_cols=232  Identities=11%  Similarity=0.103  Sum_probs=144.6

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCC------cCCccCCcceecc-ccceEEEEEEeeeccCCccE
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD------QAGIKDKVPVPLT-RGRFTVTEILAWDERENNPL  185 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~------~~~~~~~~~~~lt-~~~~~~~~~~~~~~~~~~~~  185 (790)
                      .++|||||++|+|.+.......   .+....+||++++++      +.      ..+++ .+...+ .-..|+|+++. |
T Consensus       134 ~~~~spDg~~l~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~------~~~l~~~~~~~~-~~~~~SpDG~~-l  202 (662)
T 3azo_A          134 DPVLLPERGEVWCMAEEFTGEG---PSDVRRFLAAVPLDGSAAADRSA------VRELSDDAHRFV-TGPRLSPDGRQ-A  202 (662)
T ss_dssp             EEEEETTTTEEEEEEEEECSSS---TTCEEEEEEEEETTSTTTTCGGG------SEESSCSCSSEE-CCCEECTTSSE-E
T ss_pred             CcEECCCCCEEEEEEecccCCC---CCCceeEEEEEECCCCccccCCc------eeEEEecCCCcc-cCceECCCCCE-E
Confidence            3689999999999875421100   011134899999988      53      45666 554322 23578888764 6


Q ss_pred             EEEecccCC-CCCCCccccceeEEEecC-CcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEE
Q psy463          186 LILSHNQES-DGSTPVDSWDHLTFIDLD-DQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAW  263 (790)
Q Consensus       186 ~~~~~~~~~-~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~  263 (790)
                      +|.+..... .+     ....||+++++ +|+..+   ..+++.                ........+.|||||++++.
T Consensus       203 a~~~~~~~~~~~-----~~~~i~~~d~~~~g~~~~---~~~l~~----------------~~~~~~~~~~~spdg~l~~~  258 (662)
T 3azo_A          203 VWLAWDHPRMPW-----EGTELKTARVTEDGRFAD---TRTLLG----------------GPEEAIAQAEWAPDGSLIVA  258 (662)
T ss_dssp             EEEEECTTCCTT-----TCEEEEEEEECTTSCEEE---EEEEEE----------------ETTBCEEEEEECTTSCEEEE
T ss_pred             EEEECCCCCCCC-----CCcEEEEEEECCCCcccc---cEEeCC----------------CCCceEcceEECCCCeEEEE
Confidence            666542211 11     12689999998 461000   344441                12356778999999995544


Q ss_pred             EeccCcceEEEEEECCCCceeEEEEEeCCC---cccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC
Q psy463          264 VNRVQNRARITRCSINEGTCDVVFSRDLDR---GWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD  340 (790)
Q Consensus       264 ~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~---~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~  340 (790)
                      .+++ +...|+++++++++.+.++......   .|.-....+.|+|||+ +++..+    . +      ..+||++|+++
T Consensus       259 ~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~----~-~------~~~l~~~d~~~  325 (662)
T 3azo_A          259 TDRT-GWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHG----K-G------AAVLGILDPES  325 (662)
T ss_dssp             ECTT-SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEB----S-S------SCEEEEEETTT
T ss_pred             ECCC-CCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE-EEEEEE----c-C------ccEEEEEECCC
Confidence            4443 4557999999888887766532110   1211123566778887 444665    4 6      67899999988


Q ss_pred             CCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          341 QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       341 ~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                      ++      .+.|+.+...+..  .|++|++.++|.+.... ....||.+++++  ++.+.|+.
T Consensus       326 ~~------~~~l~~~~~~~~~--~~s~~~~~~~~~~~~~~-~~~~i~~~d~~~--g~~~~l~~  377 (662)
T 3azo_A          326 GE------LVDAAGPWTEWAA--TLTVSGTRAVGVAASPR-TAYEVVELDTVT--GRARTIGA  377 (662)
T ss_dssp             TE------EEECCSSCCEEEE--EEEEETTEEEEEEEETT-EEEEEEEEETTT--CCEEEEES
T ss_pred             Cc------EEEecCCCCeEEE--EEecCCCEEEEEEcCCC-CCCEEEEEECCC--CceEEeec
Confidence            87      7788766544432  23788888888876522 236899999877  66666654

>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A

Probab=99.60  E-value=1.3e-14  Score=149.46  Aligned_cols=272  Identities=10%  Similarity=-0.016  Sum_probs=140.9

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+...+.. +|.++++....          ..|+||++||.+++.   ..|..  ....+++ ||.|+++|+||+|.+..
T Consensus        13 ~~~~~~~~-~g~~l~~~~~g----------~~~~vv~lHG~~~~~---~~~~~--~~~~l~~-~~~v~~~D~~G~G~S~~   75 (306)
T 3r40_A           13 FGSEWINT-SSGRIFARVGG----------DGPPLLLLHGFPQTH---VMWHR--VAPKLAE-RFKVIVADLPGYGWSDM   75 (306)
T ss_dssp             CEEEEECC-TTCCEEEEEEE----------CSSEEEEECCTTCCG---GGGGG--THHHHHT-TSEEEEECCTTSTTSCC
T ss_pred             CceEEEEe-CCEEEEEEEcC----------CCCeEEEECCCCCCH---HHHHH--HHHHhcc-CCeEEEeCCCCCCCCCC
Confidence            33444444 78888877652          236899999998863   33432  2344553 99999999999876543


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc-
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI-  628 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~-  628 (790)
                      ....   .......++++.+.+..+++..   +.+++.|+||||||.+++.++.++|+ +++++++.++.......... 
T Consensus        76 ~~~~---~~~~~~~~~~~~~~~~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~  148 (306)
T 3r40_A           76 PESD---EQHTPYTKRAMAKQLIEAMEQL---GHVHFALAGHNRGARVSYRLALDSPG-RLSKLAVLDILPTYEYWQRMN  148 (306)
T ss_dssp             CCCC---TTCGGGSHHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCCHHHHHHHCS
T ss_pred             CCCC---cccCCCCHHHHHHHHHHHHHHh---CCCCEEEEEecchHHHHHHHHHhChh-hccEEEEecCCCCccchhhhh
Confidence            3110   0001244666666666666643   35789999999999999999999885 89999999975432211100 


Q ss_pred             -------chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecC-CCccChhhHHHHHHHHHhcCcchhcccccC
Q psy463          629 -------YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTM-DDNVHFQQSMMLAKSLQHADIMFQSQRYMG  700 (790)
Q Consensus       629 -------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~-d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~  700 (790)
                             +...++..+  ...............+..+...    ..... ...........+...+......        
T Consensus       149 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  214 (306)
T 3r40_A          149 RAYALKIYHWSFLAQP--APLPENLLGGDPDFYVKAKLAS----WTRAGDLSAFDPRAVEHYRIAFADPMRR--------  214 (306)
T ss_dssp             HHHHHHSTHHHHHTSC--TTHHHHHHTSCHHHHHHHHHHH----TSSSSSSTTSCHHHHHHHHHHHTSHHHH--------
T ss_pred             hhhhhhhHHHHHhhcc--cchHHHHHcCCHHHHHHHHhhc----ccCCCccccCCHHHHHHHHHHHccCCCc--------
Confidence                   000000000  0000000000000000000000    00000 0111111111111111100000        


Q ss_pred             CCCcCCcchhhhh---------hhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCC
Q psy463          701 LPTFEDNLEGYKI---------AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLI  771 (790)
Q Consensus       701 ~~~~~~~~~~~~~---------~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~  771 (790)
                          ......++.         ......+.++ ++|+|+++|++|..++.......++.+.   ..+++.++ ++||.+.
T Consensus       215 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~-~~gH~~~  285 (306)
T 3r40_A          215 ----HVMCEDYRAGAYADFEHDKIDVEAGNKI-PVPMLALWGASGIAQSAATPLDVWRKWA---SDVQGAPI-ESGHFLP  285 (306)
T ss_dssp             ----HHHHHHHHHHHTHHHHHHHHHHHHTCCB-CSCEEEEEETTCC------CHHHHHHHB---SSEEEEEE-SSCSCHH
T ss_pred             ----chhhHHHHhcccccchhhhhhhhhccCC-CcceEEEEecCCcccCchhHHHHHHhhc---CCCeEEEe-cCCcCch
Confidence                000000100         0011145778 9999999999999999555555544443   23577777 6799887


Q ss_pred             C-cchHHHHHHHHHHHHh
Q psy463          772 G-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       772 ~-~~~~~~~~i~~fl~~~  788 (790)
                      . +++++.+.|.+||++.
T Consensus       286 ~e~p~~~~~~i~~fl~~~  303 (306)
T 3r40_A          286 EEAPDQTAEALVRFFSAA  303 (306)
T ss_dssp             HHSHHHHHHHHHHHHHC-
T ss_pred             hhChHHHHHHHHHHHHhc
Confidence            7 8889999999999864

>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11

Probab=99.59  E-value=2.5e-14  Score=146.56  Aligned_cols=117  Identities=12%  Similarity=0.033  Sum_probs=81.5

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....          ..|.||++||.+++   ...|..  ....++ ..|.|+++|.||+|.+... ..   ..
T Consensus        17 ~g~~l~y~~~G----------~g~~lvllHG~~~~---~~~w~~--~~~~L~-~~~~via~Dl~G~G~S~~~-~~---~~   76 (294)
T 1ehy_A           17 PDVKIHYVREG----------AGPTLLLLHGWPGF---WWEWSK--VIGPLA-EHYDVIVPDLRGFGDSEKP-DL---ND   76 (294)
T ss_dssp             SSCEEEEEEEE----------CSSEEEEECCSSCC---GGGGHH--HHHHHH-TTSEEEEECCTTSTTSCCC-CT---TC
T ss_pred             CCEEEEEEEcC----------CCCEEEEECCCCcc---hhhHHH--HHHHHh-hcCEEEecCCCCCCCCCCC-cc---cc
Confidence            78888876542          22679999999876   233432  223444 3599999999998876532 10   00


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      .....++++.+.+..++++++   .+++.|+||||||.+++.+|.++|+ +++.+|+.++.
T Consensus        77 ~~~~~~~~~a~dl~~ll~~l~---~~~~~lvGhS~Gg~va~~~A~~~P~-~v~~lvl~~~~  133 (294)
T 1ehy_A           77 LSKYSLDKAADDQAALLDALG---IEKAYVVGHDFAAIVLHKFIRKYSD-RVIKAAIFDPI  133 (294)
T ss_dssp             GGGGCHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHHHHTGG-GEEEEEEECCS
T ss_pred             ccCcCHHHHHHHHHHHHHHcC---CCCEEEEEeChhHHHHHHHHHhChh-heeEEEEecCC
Confidence            001346666666666666444   4689999999999999999999986 88988888863

>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A

Probab=99.59  E-value=8.4e-15  Score=150.55  Aligned_cols=258  Identities=10%  Similarity=-0.032  Sum_probs=140.7

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|..+++....          ..|+||++||++++.   ..|.. + ...+++. |.|+++|+||+|.+...        
T Consensus        18 ~g~~l~~~~~g----------~~~~vv~lHG~~~~~---~~~~~-~-~~~L~~~-~~vi~~D~~G~G~S~~~--------   73 (301)
T 3kda_A           18 DGVKLHYVKGG----------QGPLVMLVHGFGQTW---YEWHQ-L-MPELAKR-FTVIAPDLPGLGQSEPP--------   73 (301)
T ss_dssp             TTEEEEEEEEE----------SSSEEEEECCTTCCG---GGGTT-T-HHHHTTT-SEEEEECCTTSTTCCCC--------
T ss_pred             CCeEEEEEEcC----------CCCEEEEECCCCcch---hHHHH-H-HHHHHhc-CeEEEEcCCCCCCCCCC--------
Confidence            88888877653          236899999998773   34432 2 3345545 99999999998765432        


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCc-eEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc----------
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTR-TAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT----------  627 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~r-i~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~----------  627 (790)
                      .....+++..+.+..+++..   +.++ +.|+||||||.+++.++.++|+ +++++|+.+|.........          
T Consensus        74 ~~~~~~~~~~~~l~~~l~~l---~~~~p~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~  149 (301)
T 3kda_A           74 KTGYSGEQVAVYLHKLARQF---SPDRPFDLVAHDIGIWNTYPMVVKNQA-DIARLVYMEAPIPDARIYRFPAFTAQGES  149 (301)
T ss_dssp             SSCSSHHHHHHHHHHHHHHH---CSSSCEEEEEETHHHHTTHHHHHHCGG-GEEEEEEESSCCSSGGGGGSBSEETTEEC
T ss_pred             CCCccHHHHHHHHHHHHHHc---CCCccEEEEEeCccHHHHHHHHHhChh-hccEEEEEccCCCCCCccchhhhcchhhh
Confidence            11245666666666666533   3456 9999999999999999999986 8999998887532111000          


Q ss_pred             -cchhhhcCC-CCccCchhhhhhccc----cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463          628 -IYSERYMGL-PTFEDNLEGYKIAAL----NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL  701 (790)
Q Consensus       628 -~~~~~~~g~-~~~~~~~~~~~~~~~----~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~  701 (790)
                       .+...++.. +.   ..........    ........         .............+...+...........+.. 
T Consensus       150 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  216 (301)
T 3kda_A          150 LVWHFSFFAADDR---LAETLIAGKERFFLEHFIKSHA---------SNTEVFSERLLDLYARSYAKPHSLNASFEYYR-  216 (301)
T ss_dssp             SSTHHHHHHCSTT---HHHHHHTTCHHHHHHHHHHHTC---------SSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHH-
T ss_pred             hhhhHHHhhcCcc---hHHHHhccchHHHHHHHHHhcc---------CCcccCCHHHHHHHHHHhccccccchHHHHHH-
Confidence             000000000 00   0000000000    00000000         00001111111111111111000000000000 


Q ss_pred             CCcCCcch-hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHH
Q psy463          702 PTFEDNLE-GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYH  779 (790)
Q Consensus       702 ~~~~~~~~-~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~  779 (790)
                          .... ..........++++ ++|+|+++|++|  ++...+..+.+.+    ..+++++++++||.++. +++++.+
T Consensus       217 ----~~~~~~~~~~~~~~~l~~i-~~P~l~i~G~~D--~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~p~~~~~  285 (301)
T 3kda_A          217 ----ALNESVRQNAELAKTRLQM-PTMTLAGGGAGG--MGTFQLEQMKAYA----EDVEGHVLPGCGHWLPEECAAPMNR  285 (301)
T ss_dssp             ----THHHHHHHHHHHTTSCBCS-CEEEEEECSTTS--CTTHHHHHHHTTB----SSEEEEEETTCCSCHHHHTHHHHHH
T ss_pred             ----hhccchhhcccchhhcccc-CcceEEEecCCC--CChhHHHHHHhhc----ccCeEEEcCCCCcCchhhCHHHHHH
Confidence                0000 00000111223378 999999999999  6666666654443    34699999999999987 8999999


Q ss_pred             HHHHHHHHh
Q psy463          780 TLERFLDSC  788 (790)
Q Consensus       780 ~i~~fl~~~  788 (790)
                      .|.+|+++.
T Consensus       286 ~i~~~l~~~  294 (301)
T 3kda_A          286 LVIDFLSRG  294 (301)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHhhC
Confidence            999999753

>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*

Probab=99.59  E-value=3e-14  Score=144.68  Aligned_cols=251  Identities=13%  Similarity=0.079  Sum_probs=140.5

Q ss_pred             ceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc-hHHHHHhcCCeEEEEEcCCCCCC
Q psy463          469 SVEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-WNLYLADNKDIVVAYIDGRNSAL  546 (790)
Q Consensus       469 ~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~~~~~~~~G~~v~~~d~rG~~~  546 (790)
                      +.+.+++.+. .|.++..+  .|+.    .  + |+|+++||.++... ...|... ....++++.|++|+++|.++.+.
T Consensus         5 ~~~~~~~~s~~~~~~~~v~--~~p~----~--~-~~v~llHG~~~~~~-~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~   74 (280)
T 1dqz_A            5 PVEYLQVPSASMGRDIKVQ--FQGG----G--P-HAVYLLDGLRAQDD-YNGWDINTPAFEEYYQSGLSVIMPVGGQSSF   74 (280)
T ss_dssp             CEEEEEEEETTTTEEEEEE--EECC----S--S-SEEEECCCTTCCSS-SCHHHHHSCHHHHHTTSSSEEEEECCCTTCT
T ss_pred             eEEEEEEECcccCceeEEE--EcCC----C--C-CEEEEECCCCCCCC-cccccccCcHHHHHhcCCeEEEEECCCCCcc
Confidence            3455666654 45666655  3432    1  2 58999999863111 2233321 12244556799999999876432


Q ss_pred             Chh-hhHhhhhccCCccchhHH--HHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463          547 KGN-TLKYAGYRRLGTVEIYDQ--INVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       547 ~g~-~~~~~~~~~~~~~~~~D~--~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                      +.. .......+......+.+.  .+.+.++.++++ ++.++++|+||||||++|+.++.++|+ .|+++++.+|..++.
T Consensus        75 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~-~~~~~~~l~G~S~GG~~al~~a~~~p~-~~~~~v~~sg~~~~~  152 (280)
T 1dqz_A           75 YTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKG-VSPTGNAAVGLSMSGGSALILAAYYPQ-QFPYAASLSGFLNPS  152 (280)
T ss_dssp             TSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHC-CCSSSCEEEEETHHHHHHHHHHHHCTT-TCSEEEEESCCCCTT
T ss_pred             ccCCCCCCccccccccccHHHHHHHHHHHHHHHHcC-CCCCceEEEEECHHHHHHHHHHHhCCc-hheEEEEecCccccc
Confidence            211 000000000011222332  233344443244 566799999999999999999999985 899999999986643


Q ss_pred             cccccchhhhcCCCCccCchhhhh-hccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          624 YYDTIYSERYMGLPTFEDNLEGYK-IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       624 ~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                      ...  . ..+         ...+. ...... ...+                                        .+.+
T Consensus       153 ~~~--~-~~~---------~~~~~~~~~~~~-~~~~----------------------------------------~g~~  179 (280)
T 1dqz_A          153 ESW--W-PTL---------IGLAMNDSGGYN-ANSM----------------------------------------WGPS  179 (280)
T ss_dssp             STT--H-HHH---------HHHHHHHTTSCC-HHHH----------------------------------------HCST
T ss_pred             Ccc--h-hhh---------HHHHhhhccCcC-HHHh----------------------------------------cCCC
Confidence            210  0 000         00000 000000 0000                                        0000


Q ss_pred             CcCCcchhhhhhhhhhhhhcc--CCccEEEEecCCCc--------------ccchhhhHHHHHHHHhcC-CceEEEEcCC
Q psy463          703 TFEDNLEGYKIAALNNKVDRI--RDKQYLLVHGTMDD--------------NVHFQQSMMLAKSLQHAD-IMFQSQTYPD  765 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~i--~~~P~Lii~G~~D~--------------~v~~~~~~~l~~~l~~~g-~~~~~~~~p~  765 (790)
                          ....+...++...++++  +.+|+++.||+.|.              .++..++++++++|+++| +++++.++++
T Consensus       180 ----~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~g~~~~~~~~~~~  255 (280)
T 1dqz_A          180 ----SDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPN  255 (280)
T ss_dssp             ----TSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSC
T ss_pred             ----CchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHHHHHHHHHHhCCCCceEEEecCC
Confidence                00111122222333333  26899999999997              578899999999999999 9999999988


Q ss_pred             CCCcCCCcchHHHHHHHHHHHHhh
Q psy463          766 EEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       766 ~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      .+|.+. .....+...+.||.+.|
T Consensus       256 g~H~~~-~w~~~l~~~l~~l~~~l  278 (280)
T 1dqz_A          256 GTHSWP-YWNEQLVAMKADIQHVL  278 (280)
T ss_dssp             CCSSHH-HHHHHHHHTHHHHHHHH
T ss_pred             CccChH-HHHHHHHHHHHHHHHHh
Confidence            899764 23444456666766554

>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26

Probab=99.58  E-value=1.3e-14  Score=145.46  Aligned_cols=238  Identities=18%  Similarity=0.215  Sum_probs=129.3

Q ss_pred             EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC
Q psy463          503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID  582 (790)
Q Consensus       503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d  582 (790)
                      .||++||.+++   ...|.. .. ..++ .+|.|+++|+||+|.+...         ....+++   .++.+.+   .++
T Consensus        15 ~vvllHG~~~~---~~~w~~-~~-~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~~~~~---~~~~l~~---~l~   73 (258)
T 1m33_A           15 HLVLLHGWGLN---AEVWRC-ID-EELS-SHFTLHLVDLPGFGRSRGF---------GALSLAD---MAEAVLQ---QAP   73 (258)
T ss_dssp             EEEEECCTTCC---GGGGGG-TH-HHHH-TTSEEEEECCTTSTTCCSC---------CCCCHHH---HHHHHHT---TSC
T ss_pred             eEEEECCCCCC---hHHHHH-HH-HHhh-cCcEEEEeeCCCCCCCCCC---------CCcCHHH---HHHHHHH---HhC
Confidence            78999998876   334443 22 3344 5899999999998765432         1123344   3445554   234


Q ss_pred             CCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhc---cccchhhhcc
Q psy463          583 KTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIA---ALNNKVDRIR  659 (790)
Q Consensus       583 ~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~  659 (790)
                       +++.|+||||||.+++.+|.++|+ +++.+|+.++........ .+.    +..  ......+...   ........+.
T Consensus        74 -~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~-~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~  144 (258)
T 1m33_A           74 -DKAIWLGWSLGGLVASQIALTHPE-RVRALVTVASSPCFSARD-EWP----GIK--PDVLAGFQQQLSDDQQRTVERFL  144 (258)
T ss_dssp             -SSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCSCCBCBT-TBC----SBC--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCeEEEEECHHHHHHHHHHHHhhH-hhceEEEECCCCCccccc-ccc----CCC--HHHHHHHHHHHhccHHHHHHHHH
Confidence             789999999999999999999986 889888877643221100 000    000  0000000000   0000000000


Q ss_pred             CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCccc
Q psy463          660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV  739 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v  739 (790)
                      ..      ..............+...+....... .      .........+........+.++ ++|+|+++|++|..+
T Consensus       145 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~l~~i-~~P~l~i~G~~D~~~  210 (258)
T 1m33_A          145 AL------QTMGTETARQDARALKKTVLALPMPE-V------DVLNGGLEILKTVDLRQPLQNV-SMPFLRLYGYLDGLV  210 (258)
T ss_dssp             HT------TSTTSTTHHHHHHHHHHHHHTSCCCC-H------HHHHHHHHHHHHCCCTTGGGGC-CSCEEEEEETTCSSS
T ss_pred             HH------HhcCCccchhhHHHHHHHHHhccCCc-H------HHHHHHHHHHHhCCHHHHHhhC-CCCEEEEeecCCCCC
Confidence            00      00000000001111111111100000 0      0000000011111222456788 999999999999999


Q ss_pred             chhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          740 HFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       740 ~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      |...++.+.+.++    ..+++++|++||.+.. .++++.+.|.+||.+.
T Consensus       211 ~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~  256 (258)
T 1m33_A          211 PRKVVPMLDKLWP----HSESYIFAKAAHAPFISHPAEFCHLLVALKQRV  256 (258)
T ss_dssp             CGGGCC-CTTTCT----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHhCc----cceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence            9888777765543    3488999999999887 8889999999999753

>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*

Probab=99.58  E-value=4.5e-14  Score=149.01  Aligned_cols=121  Identities=13%  Similarity=0.067  Sum_probs=84.1

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....|.+      ...|+||++||.+++   ...|.. +... ++++||.|+++|++|+|.+.....      
T Consensus        11 ~g~~l~y~~~G~~~------~~~~~vv~~hG~~~~---~~~~~~-~~~~-l~~~g~~vi~~d~~g~g~s~~~~~------   73 (356)
T 2e3j_A           11 RGTRIHAVADSPPD------QQGPLVVLLHGFPES---WYSWRH-QIPA-LAGAGYRVVAIDQRGYGRSSKYRV------   73 (356)
T ss_dssp             TTEEEEEEEECCTT------CCSCEEEEECCTTCC---GGGGTT-THHH-HHHTTCEEEEECCTTSTTSCCCCS------
T ss_pred             CCeEEEEEEecCCC------CCCCEEEEECCCCCc---HHHHHH-HHHH-HHHcCCEEEEEcCCCCCCCCCCCc------
Confidence            78899988876642      234789999999876   333432 2333 444799999999999876532210      


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      .....+.+..+.+..+++.   ++.++++++||||||.+++.++.++|. +++++++.++..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~---l~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~  131 (356)
T 2e3j_A           74 QKAYRIKELVGDVVGVLDS---YGAEQAFVVGHDWGAPVAWTFAWLHPD-RCAGVVGISVPF  131 (356)
T ss_dssp             GGGGSHHHHHHHHHHHHHH---TTCSCEEEEEETTHHHHHHHHHHHCGG-GEEEEEEESSCC
T ss_pred             ccccCHHHHHHHHHHHHHH---cCCCCeEEEEECHhHHHHHHHHHhCcH-hhcEEEEECCcc
Confidence            0113355555555555553   345789999999999999999998885 789888887654

>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}

Probab=99.58  E-value=2.6e-14  Score=143.80  Aligned_cols=248  Identities=10%  Similarity=-0.024  Sum_probs=137.6

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....+        ...|+||++||.+++.   ..|..  ....++ .+|.|+++|+||+|.+...        
T Consensus         7 ~g~~l~~~~~g~--------~~~~~vv~lHG~~~~~---~~~~~--~~~~L~-~~~~v~~~D~~G~G~S~~~--------   64 (264)
T 3ibt_A            7 NGTLMTYSESGD--------PHAPTLFLLSGWCQDH---RLFKN--LAPLLA-RDFHVICPDWRGHDAKQTD--------   64 (264)
T ss_dssp             TTEECCEEEESC--------SSSCEEEEECCTTCCG---GGGTT--HHHHHT-TTSEEEEECCTTCSTTCCC--------
T ss_pred             CCeEEEEEEeCC--------CCCCeEEEEcCCCCcH---hHHHH--HHHHHH-hcCcEEEEccccCCCCCCC--------
Confidence            677777666533        2347899999998873   33442  234444 4699999999998765432        


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                      .....+++..+.+..+++.+   +..++.|+||||||.+++.++.++ |+ +++++++.++....   ...+...+....
T Consensus        65 ~~~~~~~~~~~~~~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~p~-~v~~lvl~~~~~~~---~~~~~~~~~~~~  137 (264)
T 3ibt_A           65 SGDFDSQTLAQDLLAFIDAK---GIRDFQMVSTSHGCWVNIDVCEQLGAA-RLPKTIIIDWLLQP---HPGFWQQLAEGQ  137 (264)
T ss_dssp             CSCCCHHHHHHHHHHHHHHT---TCCSEEEEEETTHHHHHHHHHHHSCTT-TSCEEEEESCCSSC---CHHHHHHHHHTT
T ss_pred             ccccCHHHHHHHHHHHHHhc---CCCceEEEecchhHHHHHHHHHhhChh-hhheEEEecCCCCc---Chhhcchhhccc
Confidence            11235666666666666643   346899999999999999999999 85 88988888876511   111111110000


Q ss_pred             CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh-----
Q psy463          638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK-----  712 (790)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----  712 (790)
                      . ..........    ........           .........+.+.+......          .+........     
T Consensus       138 ~-~~~~~~~~~~----~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~  191 (264)
T 3ibt_A          138 H-PTEYVAGRQS----FFDEWAET-----------TDNADVLNHLRNEMPWFHGE----------MWQRACREIEANYRT  191 (264)
T ss_dssp             C-TTTHHHHHHH----HHHHHHTT-----------CCCHHHHHHHHHTGGGSCHH----------HHHHHHHHHHHHHHH
T ss_pred             C-hhhHHHHHHH----HHHHhccc-----------CCcHHHHHHHHHhhhhccch----------hHHHHHHHhccchhh
Confidence            0 0000000000    00000000           00000011111111110000          0000000000     


Q ss_pred             hhhhhhhhhccCCccEEEEecCCCc--ccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          713 IAALNNKVDRIRDKQYLLVHGTMDD--NVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       713 ~~~~~~~~~~i~~~P~Lii~G~~D~--~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      .......+.++ ++|+|++||..|.  .+++.....+.+.++    ..++++++++||.+.. +++++.+.|.+||+
T Consensus       192 ~~~~~~~l~~i-~~P~lii~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~  263 (264)
T 3ibt_A          192 WGSPLDRMDSL-PQKPEICHIYSQPLSQDYRQLQLEFAAGHS----WFHPRHIPGRTHFPSLENPVAVAQAIREFLQ  263 (264)
T ss_dssp             HSSHHHHHHTC-SSCCEEEEEECCSCCHHHHHHHHHHHHHCT----TEEEEECCCSSSCHHHHCHHHHHHHHHHHTC
T ss_pred             ccchhhccccc-CCCeEEEEecCCccchhhHHHHHHHHHhCC----CceEEEcCCCCCcchhhCHHHHHHHHHHHHh
Confidence            01122567888 9999999875444  334555555555443    3589999999998877 88899999999985

>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A

Probab=99.57  E-value=3.2e-14  Score=145.78  Aligned_cols=268  Identities=7%  Similarity=-0.084  Sum_probs=144.6

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++..+.          ..|+||++||.+++.   ..|.. +. ..++ .+|.|+++|+||+|.+....    ...
T Consensus        16 ~g~~l~~~~~g----------~~~~vv~lHG~~~~~---~~~~~-~~-~~l~-~~~~vi~~D~~G~G~S~~~~----~~~   75 (297)
T 2qvb_A           16 AGKRMAYIDEG----------KGDAIVFQHGNPTSS---YLWRN-IM-PHLE-GLGRLVACDLIGMGASDKLS----PSG   75 (297)
T ss_dssp             TTEEEEEEEES----------SSSEEEEECCTTCCG---GGGTT-TG-GGGT-TSSEEEEECCTTSTTSCCCS----SCS
T ss_pred             CCEEEEEEecC----------CCCeEEEECCCCchH---HHHHH-HH-HHHh-hcCeEEEEcCCCCCCCCCCC----Ccc
Confidence            78888877652          137899999998763   23332 22 3344 46999999999987654220    001


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCC-CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc---ccccchhh--
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDK-TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY---YDTIYSER--  632 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~-~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~---~~~~~~~~--  632 (790)
                      .....+++..+.+..+++..   +. .++.++||||||.+++.++.++|. +++++++.+|......   ........  
T Consensus        76 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~  151 (297)
T 2qvb_A           76 PDRYSYGEQRDFLFALWDAL---DLGDHVVLVLHDWGSALGFDWANQHRD-RVQGIAFMEAIVTPMTWADWPPAVRGVFQ  151 (297)
T ss_dssp             TTSSCHHHHHHHHHHHHHHT---TCCSCEEEEEEEHHHHHHHHHHHHSGG-GEEEEEEEEECCSCBCGGGSCGGGHHHHH
T ss_pred             ccCcCHHHHHHHHHHHHHHc---CCCCceEEEEeCchHHHHHHHHHhChH-hhheeeEeccccCCccCCCCChHHHHHHH
Confidence            11245666666666666643   34 789999999999999999999885 8999998888654211   11000000  


Q ss_pred             hcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhc-CcchhcccccCCCCcCCcchhh
Q psy463          633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA-DIMFQSQRYMGLPTFEDNLEGY  711 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~  711 (790)
                      .+..+  . ....+..  .......+.       ...............+.+.+... ........+............+
T Consensus       152 ~~~~~--~-~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (297)
T 2qvb_A          152 GFRSP--Q-GEPMALE--HNIFVERVL-------PGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEV  219 (297)
T ss_dssp             HHTST--T-HHHHHHT--TCHHHHTHH-------HHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHH
T ss_pred             HHhcc--c-chhhhcc--ccHHHHHHH-------hccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhh
Confidence            00111  0 0000000  000000000       00000001111111110000000 0000000000000000000000


Q ss_pred             --hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          712 --KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       712 --~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                        ........+.++ ++|+|+++|++|..+|++.++.+.+.++    . +++++ +++|.+.. +++++.+.|.+||+++
T Consensus       220 ~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~----~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~  292 (297)
T 2qvb_A          220 VALVNEYRSWLEET-DMPKLFINAEPGAIITGRIRDYVRSWPN----Q-TEITV-PGVHFVQEDSPEEIGAAIAQFVRRL  292 (297)
T ss_dssp             HHHHHHHHHHHHHC-CSCEEEEEEEECSSSCHHHHHHHHTSSS----E-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcccc-cccEEEEecCCCCcCCHHHHHHHHHHcC----C-eEEEe-cCccchhhhCHHHHHHHHHHHHHHH
Confidence              111223567788 9999999999999999988877766543    3 77888 99999887 8889999999999876


Q ss_pred             h
Q psy463          789 F  789 (790)
Q Consensus       789 l  789 (790)
                      .
T Consensus       293 ~  293 (297)
T 2qvb_A          293 R  293 (297)
T ss_dssp             H
T ss_pred             h
Confidence            3

>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*

Probab=99.57  E-value=1.3e-14  Score=146.59  Aligned_cols=228  Identities=15%  Similarity=0.134  Sum_probs=137.9

Q ss_pred             cCCCCceEEEEEEcCC-CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCC
Q psy463          464 NITLPSVEYMSVPIQP-NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGR  542 (790)
Q Consensus       464 ~~~~~~~~~~~~~~~d-g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~r  542 (790)
                      ...++..+.+++.+.. |.++..++|+|+++.  +.+++|+|+++||+.....    ....+...+.+..+..|+.++++
T Consensus         7 ~~~~~~~~~~~~~S~~~~~~~~~~vylP~~y~--~~~~yPvly~l~G~~~~~~----~~~~~~~~l~~~~~~ivV~v~~~   80 (278)
T 2gzs_A            7 GSVFYHFSATSFDSVDGTRHYRVWTAVPNTTA--PASGYPILYMLDGNAVMDR----LDDELLKQLSEKTPPVIVAVGYQ   80 (278)
T ss_dssp             CCSSEEEEEEEEECTTSSCEEEEEEEEESSCC--CTTCEEEEEESSHHHHHHH----CCHHHHHHHTTSCCCEEEEEEES
T ss_pred             CCCCCceEEEEEEcCCCCceEEEEEECCCCCC--CCCCCCEEEEeeChhHHHH----HHHHHHHHhccCCCeEEEEEcCC
Confidence            3455677788888876 689999999999987  6778999887777643211    11122333433357788888887


Q ss_pred             CCCCC-----hhhhHhhh-h----------ccCCccchhHHHHHH-----HHHHHhCCCcCCCceEEEEechHHHHHHHH
Q psy463          543 NSALK-----GNTLKYAG-Y----------RRLGTVEIYDQINVT-----RYLQENLPYIDKTRTAIWGWSYGGYATGLA  601 (790)
Q Consensus       543 G~~~~-----g~~~~~~~-~----------~~~~~~~~~D~~~~~-----~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~  601 (790)
                      +....     +.++.... .          .... ....+..+.+     .++.++++ +|.+|++|+|+||||++++.+
T Consensus        81 ~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~i~~~~~-~~~~r~~i~G~S~GG~~a~~~  158 (278)
T 2gzs_A           81 TNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKS-GGSNNFRQLLETRIAPKVEQGLN-IDRQRRGLWGHSYGGLFVLDS  158 (278)
T ss_dssp             SSSSCCHHHHHHHTCCGGGGTTCSCC-----CCC-CCHHHHHHHHHHTHHHHHTTTSC-EEEEEEEEEEETHHHHHHHHH
T ss_pred             CCCcCcccccccccCCCCccccccccccCcCCCc-CCHHHHHHHHHHHHHHHHHHhcc-CCCCceEEEEECHHHHHHHHH
Confidence            53211     11111110 0          0000 1122222222     22233233 777899999999999999999


Q ss_pred             HhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHH
Q psy463          602 LALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMM  681 (790)
Q Consensus       602 a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~  681 (790)
                      +.+ |+ .|+++++.+|...|..                  ...+.      .....                       
T Consensus       159 ~~~-p~-~f~~~~~~s~~~~~~~------------------~~~~~------~~~~~-----------------------  189 (278)
T 2gzs_A          159 WLS-SS-YFRSYYSASPSLGRGY------------------DALLS------RVTAV-----------------------  189 (278)
T ss_dssp             HHH-CS-SCSEEEEESGGGSTTH------------------HHHHH------HHHTS-----------------------
T ss_pred             HhC-cc-ccCeEEEeCcchhcCc------------------chHHH------HHHHh-----------------------
Confidence            998 75 8999999998643210                  00000      00000                       


Q ss_pred             HHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCccc--------chhhhHHHHHHHHh
Q psy463          682 LAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV--------HFQQSMMLAKSLQH  753 (790)
Q Consensus       682 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v--------~~~~~~~l~~~l~~  753 (790)
                              .                           ... .- ..|+++.+|+.|..+        +..+++++++.|++
T Consensus       190 --------~---------------------------~~~-~~-~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~L~~  232 (278)
T 2gzs_A          190 --------E---------------------------PLQ-FC-TKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKD  232 (278)
T ss_dssp             --------C---------------------------TTT-TT-TCEEEEEECCC-----------CHHHHHHHHHHHHHH
T ss_pred             --------h---------------------------ccC-CC-CCcEEEEecCccccccccchhhhhHHHHHHHHHHHHc
Confidence                    0                           000 01 468999999999764        57899999999999


Q ss_pred             cCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHH
Q psy463          754 ADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDS  787 (790)
Q Consensus       754 ~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~  787 (790)
                      +|+++++.++||++|.... ...+. ..+.||.+
T Consensus       233 ~g~~~~~~~~~g~~H~~~~-~~~~~-~~l~fl~~  264 (278)
T 2gzs_A          233 KGVNAVFWDFPNLGHGPMF-NASFR-QALLDISG  264 (278)
T ss_dssp             TTCCEEEEECTTCCHHHHH-HHHHH-HHHHHHTT
T ss_pred             CCCeeEEEEcCCCCccchh-HHHHH-HHHHHHhh
Confidence            9999999999999997542 23333 34456643

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.57  E-value=2.4e-13  Score=138.94  Aligned_cols=231  Identities=15%  Similarity=0.125  Sum_probs=154.3

Q ss_pred             CcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCC-cccccCc
Q psy463          142 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDD-QAGIKDK  220 (790)
Q Consensus       142 ~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~  220 (790)
                      -..|+++++.+++      ...+......+. -..|+++++. +++..             ...|+++++++ ++.    
T Consensus        21 ~~~i~~~d~~~~~------~~~~~~~~~~v~-~~~~spdg~~-l~~~~-------------~~~i~~~d~~~~~~~----   75 (297)
T 2ojh_A           21 RSSIEIFNIRTRK------MRVVWQTPELFE-APNWSPDGKY-LLLNS-------------EGLLYRLSLAGDPSP----   75 (297)
T ss_dssp             CEEEEEEETTTTE------EEEEEEESSCCE-EEEECTTSSE-EEEEE-------------TTEEEEEESSSCCSC----
T ss_pred             ceeEEEEeCCCCc------eeeeccCCcceE-eeEECCCCCE-EEEEc-------------CCeEEEEeCCCCCCc----
Confidence            3479999988774      233333332333 3467777663 33322             16899999998 763    


Q ss_pred             CCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEec-cCcceEEEEEECCCCceeEEEEEeCCCcccccC
Q psy463          221 VPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNR-VQNRARITRCSINEGTCDVVFSRDLDRGWFEPF  299 (790)
Q Consensus       221 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r-~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~  299 (790)
                        ..+..+               .....+..+.|||||+.+++... ......|+.++..++..+.+....       ..
T Consensus        76 --~~~~~~---------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------~~  131 (297)
T 2ojh_A           76 --EKVDTG---------------FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-------PS  131 (297)
T ss_dssp             --EECCCT---------------TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-------SE
T ss_pred             --eEeccc---------------cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-------Cc
Confidence              232200               11234567899999996666553 334567999999888766554321       13


Q ss_pred             CceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC-
Q psy463          300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ-  378 (790)
Q Consensus       300 ~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~-  378 (790)
                      ..+.|||||+.|++...    .++      ..+||.+++.+++      ...++.....+.. +.|+|||+.|++.+.. 
T Consensus       132 ~~~~~spdg~~l~~~~~----~~~------~~~l~~~~~~~~~------~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~  194 (297)
T 2ojh_A          132 YWHGWSPDGKSFTYCGI----RDQ------VFDIYSMDIDSGV------ETRLTHGEGRNDG-PDYSPDGRWIYFNSSRT  194 (297)
T ss_dssp             EEEEECTTSSEEEEEEE----ETT------EEEEEEEETTTCC------EEECCCSSSCEEE-EEECTTSSEEEEEECTT
T ss_pred             cceEECCCCCEEEEEEC----CCC------ceEEEEEECCCCc------ceEcccCCCcccc-ceECCCCCEEEEEecCC
Confidence            35799999999986665    455      5689999888776      6677665544544 8999999999998864 


Q ss_pred             CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC--------CCeEEEEecCCCeEE
Q psy463          379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG--------IPEIMLFDKTGQRLL  450 (790)
Q Consensus       379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~--------~~~i~~~~~~~~~~~  450 (790)
                      +.   .+||.++..+  +....++.       ....+..+.|||||+++++......        ...|+++++++++..
T Consensus       195 ~~---~~i~~~~~~~--~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~  262 (297)
T 2ojh_A          195 GQ---MQIWRVRVDG--SSVERITD-------SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE  262 (297)
T ss_dssp             SS---CEEEEEETTS--SCEEECCC-------CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred             CC---ccEEEECCCC--CCcEEEec-------CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence            33   7899998766  45555544       3456677899999999988765432        256899998776543

>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35

Probab=99.57  E-value=1.2e-13  Score=138.99  Aligned_cols=244  Identities=11%  Similarity=0.038  Sum_probs=124.3

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|.||++||.+++.   ..|.  .....+++.||.|+++|+||+|.+....         ...+++..+.+..+++..+ 
T Consensus        16 ~~~vvllHG~~~~~---~~w~--~~~~~L~~~~~~vi~~Dl~GhG~S~~~~---------~~~~~~~a~~l~~~l~~l~-   80 (264)
T 1r3d_A           16 TPLVVLVHGLLGSG---ADWQ--PVLSHLARTQCAALTLDLPGHGTNPERH---------CDNFAEAVEMIEQTVQAHV-   80 (264)
T ss_dssp             BCEEEEECCTTCCG---GGGH--HHHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTC-
T ss_pred             CCcEEEEcCCCCCH---HHHH--HHHHHhcccCceEEEecCCCCCCCCCCC---------ccCHHHHHHHHHHHHHHhC-
Confidence            48899999998762   3343  2234454468999999999988765320         1235566655655555333 


Q ss_pred             cCCCceEEEEechHHHHHHH---HHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhh
Q psy463          581 IDKTRTAIWGWSYGGYATGL---ALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDR  657 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~---~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  657 (790)
                      ++..++.|+||||||.+++.   ++.++|+ +++++++.++........... .+.....   .....+...........
T Consensus        81 ~~~~p~~lvGhSmGG~va~~~~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~  155 (264)
T 1r3d_A           81 TSEVPVILVGYSLGGRLIMHGLAQGAFSRL-NLRGAIIEGGHFGLQENEEKA-ARWQHDQ---QWAQRFSQQPIEHVLSD  155 (264)
T ss_dssp             CTTSEEEEEEETHHHHHHHHHHHHTTTTTS-EEEEEEEESCCCCCCSHHHHH-HHHHHHH---HHHHHHHHSCHHHHHHH
T ss_pred             cCCCceEEEEECHhHHHHHHHHHHHhhCcc-ccceEEEecCCCCCCChhhhh-hhhcccH---HHHHHhccccHHHHHHH
Confidence            22224999999999999999   8888875 888888877643221100000 0000000   00000000000000000


Q ss_pred             ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCc
Q psy463          658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDD  737 (790)
Q Consensus       658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~  737 (790)
                      ....+.     ..  .........+.......... .......      .............+.++ ++|+|+++|++|.
T Consensus       156 ~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~  220 (264)
T 1r3d_A          156 WYQQAV-----FS--SLNHEQRQTLIAQRSANLGS-SVAHMLL------ATSLAKQPYLLPALQAL-KLPIHYVCGEQDS  220 (264)
T ss_dssp             HTTSGG-----GT--TCCHHHHHHHHHHHTTSCHH-HHHHHHH------HTCGGGCCCCHHHHHTC-SSCEEEEEETTCH
T ss_pred             Hhhhhh-----hh--ccCHHHHHHHHHHHhhcchH-HHHHHHH------hhhhccCccHHHHHHhc-CCCEEEEEECCCc
Confidence            000000     00  00111111111111000000 0000000      00000001122456788 9999999999997


Q ss_pred             ccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          738 NVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       738 ~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      .++     .+.+.+.     ++++++|++||.++. .++++.+.+.+||.++.
T Consensus       221 ~~~-----~~~~~~~-----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~  263 (264)
T 1r3d_A          221 KFQ-----QLAESSG-----LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSII  263 (264)
T ss_dssp             HHH-----HHHHHHC-----SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred             hHH-----HHHHHhC-----CcEEEcCCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence            542     2333332     478999999999887 88999999999998874

>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*

Probab=99.57  E-value=1.2e-13  Score=146.37  Aligned_cols=289  Identities=13%  Similarity=0.057  Sum_probs=155.2

Q ss_pred             ceEEEEEEcCC--Cc--EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccc-cccc----------------cccchHHH
Q psy463          469 SVEYMSVPIQP--NM--EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQ-VTER----------------FSVDWNLY  527 (790)
Q Consensus       469 ~~~~~~~~~~d--g~--~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~----------------~~~~~~~~  527 (790)
                      ....+.+.+.|  |.  ...+.++.|.+..    .+.|+|.+.||..+... ...+                +...+...
T Consensus        74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~~----~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~  149 (462)
T 3guu_A           74 ASFQLQYRTTNTQNEAVADVATVWIPAKPA----SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIG  149 (462)
T ss_dssp             EEEEEEEEEECTTSCEEEEEEEEEECSSCC----SSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHH
T ss_pred             eEEEEEEEEECCCCCEEEEEEEEEecCCCC----CCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHH
Confidence            45556666544  54  4788999998733    35899999999765311 0011                11112333


Q ss_pred             HHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC-CCceEEEEechHHHHHHHHHhcC-
Q psy463          528 LADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID-KTRTAIWGWSYGGYATGLALALD-  605 (790)
Q Consensus       528 ~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d-~~ri~i~G~S~GG~~a~~~a~~~-  605 (790)
                      ++.++||+|+++|++|.+.   .+....      ....++.+.++.+.... .++ ..+++++|||+||..+++++... 
T Consensus       150 ~~l~~G~~Vv~~Dy~G~G~---~y~~~~------~~~~~vlD~vrAa~~~~-~~~~~~~v~l~G~S~GG~aal~aa~~~~  219 (462)
T 3guu_A          150 WALQQGYYVVSSDHEGFKA---AFIAGY------EEGMAILDGIRALKNYQ-NLPSDSKVALEGYSGGAHATVWATSLAE  219 (462)
T ss_dssp             HHHHTTCEEEEECTTTTTT---CTTCHH------HHHHHHHHHHHHHHHHT-TCCTTCEEEEEEETHHHHHHHHHHHHHH
T ss_pred             HHHhCCCEEEEecCCCCCC---cccCCc------chhHHHHHHHHHHHHhc-cCCCCCCEEEEeeCccHHHHHHHHHhCh
Confidence            4144899999999999764   221110      11233444555544422 232 47999999999999998887654 


Q ss_pred             ---CCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHH
Q psy463          606 ---PSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMML  682 (790)
Q Consensus       606 ---p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l  682 (790)
                         |+-.++++++.++..++........    +.+     ...+....+... .+.  .|.+.  ...+.... ....++
T Consensus       220 ~yapel~~~g~~~~~~p~dl~~~~~~~~----~~~-----~~g~~~~~l~Gl-~~~--yP~l~--~~l~~~lt-~~g~~~  284 (462)
T 3guu_A          220 SYAPELNIVGASHGGTPVSAKDTFTFLN----GGP-----FAGFALAGVSGL-SLA--HPDME--SFIEARLN-AKGQRT  284 (462)
T ss_dssp             HHCTTSEEEEEEEESCCCBHHHHHHHHT----TST-----THHHHHHHHHHH-HHH--CHHHH--HHHHTTBC-HHHHHH
T ss_pred             hhcCccceEEEEEecCCCCHHHHHHHhc----cch-----hHHHHHHHHHhH-Hhh--Ccchh--HHHHHHhC-HHHHHH
Confidence               3446889999999888753211000    000     000000000000 000  00000  00000000 112222


Q ss_pred             HHHHHhcC-cchh---------cccccCCCCcCCc---chhhhhhhhhh-----hhhccCCccEEEEecCCCcccchhhh
Q psy463          683 AKSLQHAD-IMFQ---------SQRYMGLPTFEDN---LEGYKIAALNN-----KVDRIRDKQYLLVHGTMDDNVHFQQS  744 (790)
Q Consensus       683 ~~~l~~~~-~~~~---------~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~i~~~P~Lii~G~~D~~v~~~~~  744 (790)
                      ++.....+ ...+         ...+.........   .....+..+-.     ...++ ++|+||+||++|.+||+.++
T Consensus       285 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~-~~PvlI~hG~~D~vVP~~~s  363 (462)
T 3guu_A          285 LKQIRGRGFCLPQVVLTYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVP-KFPRFIWHAIPDEIVPYQPA  363 (462)
T ss_dssp             HHHHTSTTCCHHHHHHHCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCC-CSEEEEEEETTCSSSCHHHH
T ss_pred             HHHHHhcCcchHHHHHhhccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCC-CCCEEEEeCCCCCcCCHHHH
Confidence            22222110 0000         0001110000000   01111111100     12244 89999999999999999999


Q ss_pred             HHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          745 MMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       745 ~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      +++++.++++|.++++++||+.+|....  ..-+..+.+||+++|
T Consensus       364 ~~l~~~l~~~G~~V~~~~y~~~~H~~~~--~~~~~d~l~WL~~r~  406 (462)
T 3guu_A          364 ATYVKEQCAKGANINFSPYPIAEHLTAE--IFGLVPSLWFIKQAF  406 (462)
T ss_dssp             HHHHHHHHHTTCEEEEEEESSCCHHHHH--HHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCeEEEEECcCCccCch--hhhHHHHHHHHHHHh
Confidence            9999999999999999999999998753  233678899998876

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.56  E-value=2.1e-12  Score=135.95  Aligned_cols=234  Identities=10%  Similarity=0.026  Sum_probs=142.1

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceE--------EEEEEeeeccCCcc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT--------VTEILAWDERENNP  184 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~--------~~~~~~~~~~~~~~  184 (790)
                      ...|+|||+.+++......            .|+++|+++++     ....+..+...        ...-..++++++  
T Consensus        93 ~~~~s~dg~~l~v~~~~~~------------~v~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--  153 (353)
T 3vgz_A           93 GATINNTTQTLWFGNTVNS------------AVTAIDAKTGE-----VKGRLVLDDRKRTEEVRPLQPRELVADDATN--  153 (353)
T ss_dssp             SEEEETTTTEEEEEETTTT------------EEEEEETTTCC-----EEEEEESCCCCCCSSCCCCEEEEEEEETTTT--
T ss_pred             eEEECCCCCEEEEEecCCC------------EEEEEeCCCCe-----eEEEEecCCCccccccCCCCCceEEECCCCC--
Confidence            4578999998887664322            89999998774     22333222100        122357777776  


Q ss_pred             EEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE
Q psy463          185 LLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV  264 (790)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~  264 (790)
                      .+|+.....         ...|+++|+++++....     +.                 ........+.|+|||+.++..
T Consensus       154 ~l~~~~~~~---------~~~i~~~d~~~~~~~~~-----~~-----------------~~~~~~~~~~~s~dg~~l~~~  202 (353)
T 3vgz_A          154 TVYISGIGK---------ESVIWVVDGGNIKLKTA-----IQ-----------------NTGKMSTGLALDSEGKRLYTT  202 (353)
T ss_dssp             EEEEEEESS---------SCEEEEEETTTTEEEEE-----EC-----------------CCCTTCCCCEEETTTTEEEEE
T ss_pred             EEEEEecCC---------CceEEEEcCCCCceEEE-----ec-----------------CCCCccceEEECCCCCEEEEE
Confidence            455544211         15799999988753211     11                 011123457899999976666


Q ss_pred             eccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcc
Q psy463          265 NRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI  344 (790)
Q Consensus       265 ~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~  344 (790)
                      ...   ..|+++|+.+++.......... +.........|+|||+.+++ ..   ...+        .|+++|+.+++  
T Consensus       203 ~~~---~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~-~~---~~~~--------~v~~~d~~~~~--  264 (353)
T 3vgz_A          203 NAD---GELITIDTADNKILSRKKLLDD-GKEHFFINISLDTARQRAFI-TD---SKAA--------EVLVVDTRNGN--  264 (353)
T ss_dssp             CTT---SEEEEEETTTTEEEEEEECCCS-SSCCCEEEEEEETTTTEEEE-EE---SSSS--------EEEEEETTTCC--
T ss_pred             cCC---CeEEEEECCCCeEEEEEEcCCC-CCCcccceEEECCCCCEEEE-Ee---CCCC--------EEEEEECCCCc--
Confidence            553   2488999999877655443111 00111224799999998874 43   1223        79999998776  


Q ss_pred             cCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCC
Q psy463          345 KDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNV  424 (790)
Q Consensus       345 ~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg  424 (790)
                         ....+..+..  . .+.|+|||+.+|+.....    ..|+++++.+  ++......       .......+.|+|||
T Consensus       265 ---~~~~~~~~~~--~-~~~~s~dg~~l~v~~~~~----~~v~~~d~~~--~~~~~~~~-------~~~~~~~~~~s~dg  325 (353)
T 3vgz_A          265 ---ILAKVAAPES--L-AVLFNPARNEAYVTHRQA----GKVSVIDAKS--YKVVKTFD-------TPTHPNSLALSADG  325 (353)
T ss_dssp             ---EEEEEECSSC--C-CEEEETTTTEEEEEETTT----TEEEEEETTT--TEEEEEEE-------CCSEEEEEEECTTS
T ss_pred             ---EEEEEEcCCC--c-eEEECCCCCEEEEEECCC----CeEEEEECCC--CeEEEEEe-------cCCCCCeEEEcCCC
Confidence               1223332221  2 278999999888776543    4788888876  44322222       12355778999999


Q ss_pred             cEEEEEeec
Q psy463          425 SYYVLSCIG  433 (790)
Q Consensus       425 ~~~~~~~~~  433 (790)
                      ++++++...
T Consensus       326 ~~l~v~~~~  334 (353)
T 3vgz_A          326 KTLYVSVKQ  334 (353)
T ss_dssp             CEEEEEEEC
T ss_pred             CEEEEEEcc
Confidence            988777655

>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*

Probab=99.56  E-value=1.9e-14  Score=152.96  Aligned_cols=225  Identities=14%  Similarity=0.073  Sum_probs=141.1

Q ss_pred             CCceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCe----EEEEEcC
Q psy463          467 LPSVEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI----VVAYIDG  541 (790)
Q Consensus       467 ~~~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~----~v~~~d~  541 (790)
                      .++.+.+++.+. .|..+.+++|+|.++.   .+++|+|+++||+.....  .. .......+.+ +|+    +|+++|+
T Consensus       165 ~G~v~~~~~~S~~~g~~~~~~vy~P~~~~---~~~~PvlvllHG~~~~~~--~~-~~~~~~~l~~-~g~~~p~iVV~~d~  237 (403)
T 3c8d_A          165 EIPAKEIIWKSERLKNSRRVWIFTTGDVT---AEERPLAVLLDGEFWAQS--MP-VWPVLTSLTH-RQQLPPAVYVLIDA  237 (403)
T ss_dssp             SSCCEEEEEEETTTTEEEEEEEEEC--------CCCCEEEESSHHHHHHT--SC-CHHHHHHHHH-TTSSCSCEEEEECC
T ss_pred             CCceEEEEEEccccCCcEEEEEEeCCCCC---CCCCCEEEEeCCHHHhhc--Cc-HHHHHHHHHH-cCCCCCeEEEEECC
Confidence            345666777764 5778999999998653   467999999999643211  00 1112334443 565    4999999


Q ss_pred             CCCCCChhhhHhhhhccCCccchhHH--HHHHHHHHHhCC-CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC
Q psy463          542 RNSALKGNTLKYAGYRRLGTVEIYDQ--INVTRYLQENLP-YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP  618 (790)
Q Consensus       542 rG~~~~g~~~~~~~~~~~~~~~~~D~--~~~~~~l~~~~~-~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~  618 (790)
                      +++......+     .  ....+.+.  .+.+.++.++++ ..|+++++|+|+||||++++.++.++|+ .|+++++.+|
T Consensus       238 ~~~~~r~~~~-----~--~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~-~f~~~~~~sg  309 (403)
T 3c8d_A          238 IDTTHRAHEL-----P--CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPE-RFGCVLSQSG  309 (403)
T ss_dssp             CSHHHHHHHS-----S--SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTT-TCCEEEEESC
T ss_pred             CCCccccccC-----C--ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCch-hhcEEEEecc
Confidence            8632111111     0  01122232  245666666554 2577899999999999999999999885 8999999999


Q ss_pred             CCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccc
Q psy463          619 VTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY  698 (790)
Q Consensus       619 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~  698 (790)
                      ...+....         .+                                .+        ..+.+.+..          
T Consensus       310 ~~~~~~~~---------~~--------------------------------~~--------~~~~~~~~~----------  330 (403)
T 3c8d_A          310 SYWWPHRG---------GQ--------------------------------QE--------GVLLEKLKA----------  330 (403)
T ss_dssp             CTTTTCTT---------SS--------------------------------SC--------CHHHHHHHT----------
T ss_pred             ccccCCCC---------CC--------------------------------cH--------HHHHHHHHh----------
Confidence            76532100         00                                00        000011100          


Q ss_pred             cCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHH
Q psy463          699 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFY  778 (790)
Q Consensus       699 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~  778 (790)
                                         ...... ..|++|+||+.|..+ ..+++.+++.|+++|+++++.++|| +|.+. .....+
T Consensus       331 -------------------~~~~~~-~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G-gH~~~-~w~~~l  387 (403)
T 3c8d_A          331 -------------------GEVSAE-GLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-GHDAL-CWRGGL  387 (403)
T ss_dssp             -------------------TSSCCC-SCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSCHH-HHHHHH
T ss_pred             -------------------ccccCC-CceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC-CCCHH-HHHHHH
Confidence                               001223 689999999998654 6889999999999999999999999 68754 344555


Q ss_pred             HHHHHHHHHh
Q psy463          779 HTLERFLDSC  788 (790)
Q Consensus       779 ~~i~~fl~~~  788 (790)
                      ...+.||.+.
T Consensus       388 ~~~l~~l~~~  397 (403)
T 3c8d_A          388 MQGLIDLWQP  397 (403)
T ss_dssp             HHHHHHHHGG
T ss_pred             HHHHHHHhcc
Confidence            6677777654

>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*

Probab=99.55  E-value=5.5e-15  Score=149.00  Aligned_cols=228  Identities=11%  Similarity=0.011  Sum_probs=128.4

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHh
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN  577 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~  577 (790)
                      ....|+||++||+++..   ..|.  .....++ .+|.|+++|+||+|.+...        .....+++..+.+..+++.
T Consensus        17 ~~~~~~vv~~HG~~~~~---~~~~--~~~~~l~-~~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~l~~   82 (267)
T 3fla_A           17 PDARARLVCLPHAGGSA---SFFF--PLAKALA-PAVEVLAVQYPGRQDRRHE--------PPVDSIGGLTNRLLEVLRP   82 (267)
T ss_dssp             TTCSEEEEEECCTTCCG---GGGH--HHHHHHT-TTEEEEEECCTTSGGGTTS--------CCCCSHHHHHHHHHHHTGG
T ss_pred             CCCCceEEEeCCCCCCc---hhHH--HHHHHhc-cCcEEEEecCCCCCCCCCC--------CCCcCHHHHHHHHHHHHHh
Confidence            34568999999998762   3333  2233344 4699999999997653321        1123455655555555542


Q ss_pred             CCCcCCCceEEEEechHHHHHHHHHhcCCCC---ceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccch
Q psy463          578 LPYIDKTRTAIWGWSYGGYATGLALALDPSN---VFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK  654 (790)
Q Consensus       578 ~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~---~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  654 (790)
                         .+..+++|+||||||.+++.++.++|..   .++++++.++........    ......     ....+..     .
T Consensus        83 ---~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~----~~~~~~-----~~~~~~~-----~  145 (267)
T 3fla_A           83 ---FGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRD----DDVRGA-----SDERLVA-----E  145 (267)
T ss_dssp             ---GTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCC----SCTTCC-----CHHHHHH-----H
T ss_pred             ---cCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccc----hhhccc-----chHHHHH-----H
Confidence               3457899999999999999999999863   277777776653221100    000000     0000000     0


Q ss_pred             hhhccCCcEEEEeecCCCc-cChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEec
Q psy463          655 VDRIRDKQYLLVHGTMDDN-VHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHG  733 (790)
Q Consensus       655 ~~~~~~~p~l~~~g~~d~~-v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G  733 (790)
                      ...+...+        ... ........+...+.. ..                 ........ ....++ ++|+|+++|
T Consensus       146 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~-~~~~~~-~~P~l~i~g  197 (267)
T 3fla_A          146 LRKLGGSD--------AAMLADPELLAMVLPAIRS-DY-----------------RAVETYRH-EPGRRV-DCPVTVFTG  197 (267)
T ss_dssp             HHHTCHHH--------HHHHHSHHHHHHHHHHHHH-HH-----------------HHHHHCCC-CTTCCB-SSCEEEEEE
T ss_pred             HHHhcCcc--------hhhccCHHHHHHHHHHHHH-HH-----------------Hhhhcccc-cccCcC-CCCEEEEec
Confidence            00000000        000 000000000000000 00                 00000000 111467 899999999


Q ss_pred             CCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          734 TMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       734 ~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ++|..+|++.+..+.+.+..   +++++++++ +|.+.. +++++.+.+.+||+++
T Consensus       198 ~~D~~~~~~~~~~~~~~~~~---~~~~~~~~g-gH~~~~~~~~~~~~~i~~fl~~~  249 (267)
T 3fla_A          198 DHDPRVSVGEARAWEEHTTG---PADLRVLPG-GHFFLVDQAAPMIATMTEKLAGP  249 (267)
T ss_dssp             TTCTTCCHHHHHGGGGGBSS---CEEEEEESS-STTHHHHTHHHHHHHHHHHTC--
T ss_pred             CCCCCCCHHHHHHHHHhcCC---CceEEEecC-CceeeccCHHHHHHHHHHHhccc
Confidence            99999999888777665543   479999999 999876 8889999999999764

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=99.55  E-value=5.3e-13  Score=135.17  Aligned_cols=241  Identities=11%  Similarity=0.108  Sum_probs=165.5

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..+++||++|+|....+..           +||+++.++..      ...|+.+...     -+.+.++. |||...+..
T Consensus        19 g~~~~~g~~iy~~n~~d~~-----------~ly~~~~dg~~------~~~l~~~~~~-----~i~~~g~~-Iyy~~~~~~   75 (302)
T 3s25_A           19 GLFCESDGEVFFSNTNDNG-----------RLYAMNIDGSN------IHKLSNDTAM-----YINADKNY-VYYVRNNNQ   75 (302)
T ss_dssp             TCEEEETTEEEEEEGGGTT-----------EEEEEETTSCS------CEEEEEEEEE-----EEEECSSE-EEEEEECC-
T ss_pred             eEEEEeCCEEEEEeCCCCc-----------eEEEEcCCCCC------CEEccCCcee-----eEEEcCCE-EEEEECCCC
Confidence            3678999999998864432           89999998874      6677765422     22445543 777765432


Q ss_pred             CC-CCCCc-cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEe-ccCcc
Q psy463          194 SD-GSTPV-DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVN-RVQNR  270 (790)
Q Consensus       194 ~~-~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~-r~~~~  270 (790)
                      .+ ...+. .....||++++++++      ..+|+                 ....    ..|+|+|+.++|++ .....
T Consensus        76 ~~~~~~~~~~n~~~Iy~i~~dg~~------~~~l~-----------------~~~~----~~~s~~g~~Iy~~~~~~~~~  128 (302)
T 3s25_A           76 KITSQTFFSYDRNSLCRIKRNGHG------STVLD-----------------PDPC----IYASLIGNYIYYLHYDTQTA  128 (302)
T ss_dssp             -----CCSSCCSEEEEEEETTSCC------CEEEE-----------------CSCE----EEEEEETTEEEEEEESSSSC
T ss_pred             cccccceeccCCCeEEEEeCCCCc------ceEee-----------------cCCc----cEEEEeCCEEEEEeecCCCC
Confidence            11 11222 235789999999986      34444                 2222    26899999888876 22345


Q ss_pred             eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463          271 ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  350 (790)
Q Consensus       271 ~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~  350 (790)
                      ..||++++++...++|+...          .+.++|+|++|+| .+   .  |      ..+|++++++++.      .+
T Consensus       129 ~~Iy~~~~dGs~~~~lt~~~----------~~~~~~~g~~iy~-t~---~--g------~~~Iy~~~l~g~~------~~  180 (302)
T 3s25_A          129 TSLYRIRIDGEEKKKIKNHY----------LFTCNTSDRYFYY-NN---P--K------NGQLYRYDTASQS------EA  180 (302)
T ss_dssp             EEEEEEETTSCCCEEEESSC----------CCCSEEETTEEEE-EC---T--T------TCCEEEEETTTTE------EE
T ss_pred             ceEEEEECCCCCeEEEeCCC----------ceEeeEECCEEEE-Ee---C--C------CceEEEEECCCCC------EE
Confidence            67999999988888787532          1457999999995 44   2  4      4589999999887      66


Q ss_pred             cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          351 PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       351 ~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      .|..+...   .+ ++|++++|||+.....   .+|+++++++  +..+.|+..       .  .  +.++|++++|+++
T Consensus       181 ~l~~~~~~---~~-~~P~g~~iy~t~~~~~---~~I~~~~ldG--~~~~~Lt~~-------~--~--~~~~~~g~~Iy~~  240 (302)
T 3s25_A          181 LFYDCNCY---KP-VVLDDTNVYYMDVNRD---NAIVHVNINN--PNPVVLTEA-------N--I--EHYNVYGSLIFYQ  240 (302)
T ss_dssp             EEECSCEE---EE-EEEETTEEEEEEGGGT---TEEEEECSSS--CCCEECSCS-------C--E--EEEEEETTEEEEE
T ss_pred             EEeCCCcc---ce-eeecCCEEEEEEcCCC---cEEEEEECCC--CCeEEEeCC-------C--c--ceEEECCCEEEEE
Confidence            77654332   23 4599999999876633   5899999998  666777652       1  1  5699999999876


Q ss_pred             eecCCCCeEEEEecCCCeEEEec
Q psy463          431 CIGPGIPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       431 ~~~~~~~~i~~~~~~~~~~~~l~  453 (790)
                      .++.. +.|+.++++|...+.|.
T Consensus       241 ~~~~~-~~i~~~~~DG~~r~~l~  262 (302)
T 3s25_A          241 RGGDN-PALCVVKNDGTGFKELA  262 (302)
T ss_dssp             ECSSS-CEEEEEETTSCCCEEEE
T ss_pred             ECCCC-cEEEEEECCCCccEEee
Confidence            55443 88999999986555543

>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}

Probab=99.55  E-value=2.1e-14  Score=142.58  Aligned_cols=210  Identities=12%  Similarity=0.043  Sum_probs=122.7

Q ss_pred             CccEEEEEcCCCCcccccccccc--chHHHHHhcCCeEEEEEcCCCCCCCh-------h-hh----HhhhhccC----Cc
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSV--DWNLYLADNKDIVVAYIDGRNSALKG-------N-TL----KYAGYRRL----GT  561 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~--~~~~~~~~~~G~~v~~~d~rG~~~~g-------~-~~----~~~~~~~~----~~  561 (790)
                      +.|.||++||..++.   ..|..  ......+.+.||.|+.+|+++.....       . .+    .......|    ..
T Consensus         4 ~~~~vl~lHG~g~~~---~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~   80 (243)
T 1ycd_A            4 QIPKLLFLHGFLQNG---KVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEI   80 (243)
T ss_dssp             CCCEEEEECCTTCCH---HHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSS
T ss_pred             cCceEEEeCCCCccH---HHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCC
Confidence            458999999988763   22321  11223344469999999999432100       0 00    00000111    11


Q ss_pred             cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC-----CCceEEEEEeCCCCCcccccccchhhhcCC
Q psy463          562 VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP-----SNVFKCGISVAPVTDWIYYDTIYSERYMGL  636 (790)
Q Consensus       562 ~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~  636 (790)
                      ....|+.++++++.+.. ..+..+++|+||||||.+|+.++.+++     ...+++++..++.......           
T Consensus        81 ~~~~d~~~~~~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~-----------  148 (243)
T 1ycd_A           81 SHELDISEGLKSVVDHI-KANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPD-----------  148 (243)
T ss_dssp             GGGCCCHHHHHHHHHHH-HHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEEC-----------
T ss_pred             cchhhHHHHHHHHHHHH-HhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcc-----------
Confidence            12456666666665521 123468999999999999999988642     1145566665554321100           


Q ss_pred             CCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhh
Q psy463          637 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAAL  716 (790)
Q Consensus       637 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  716 (790)
                            . .+            . ..+.+                        ...                  +.  ..
T Consensus       149 ------~-~~------------~-~~~~~------------------------~~~------------------~~--~~  164 (243)
T 1ycd_A          149 ------P-EH------------P-GELRI------------------------TEK------------------FR--DS  164 (243)
T ss_dssp             ------T-TS------------T-TCEEE------------------------CGG------------------GT--TT
T ss_pred             ------c-cc------------c-ccccc------------------------chh------------------HH--Hh
Confidence                  0 00            0 00000                        000                  00  00


Q ss_pred             hhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcC---CceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          717 NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD---IMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       717 ~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g---~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      ...+.++ ++|+|++||++|..+|++.+..+++.++..+   .....+++++++|.+.. ...+.+.+.+||+++++
T Consensus       165 ~~~~~~~-~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~-~~~~~~~i~~fl~~~~~  239 (243)
T 1ycd_A          165 FAVKPDM-KTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPN-KKDIIRPIVEQITSSLQ  239 (243)
T ss_dssp             TCCCTTC-CCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCC-CHHHHHHHHHHHHHHHC
T ss_pred             ccCcccC-CCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCc-hHHHHHHHHHHHHHhhh
Confidence            0223457 8999999999999999999999999998752   11244566778998764 34689999999998764

>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13

Probab=99.54  E-value=7.7e-14  Score=143.56  Aligned_cols=105  Identities=16%  Similarity=0.067  Sum_probs=74.9

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcC--CeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNK--DIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE  576 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~  576 (790)
                      ...|.||++||.+++.   ..|.  .....++++  ||.|+++|+||+|.+.....         ..++++.+.+..+.+
T Consensus        34 ~~~~~vvllHG~~~~~---~~~~--~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~---------~~~~~~~~~l~~~~~   99 (302)
T 1pja_A           34 ASYKPVIVVHGLFDSS---YSFR--HLLEYINETHPGTVVTVLDLFDGRESLRPLW---------EQVQGFREAVVPIMA   99 (302)
T ss_dssp             -CCCCEEEECCTTCCG---GGGH--HHHHHHHHHSTTCCEEECCSSCSGGGGSCHH---------HHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEECCCCCCh---hHHH--HHHHHHHhcCCCcEEEEeccCCCccchhhHH---------HHHHHHHHHHHHHhh
Confidence            3457889999988763   3343  233344446  89999999999765432211         246666677776666


Q ss_pred             hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          577 NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      ..    ..++.++||||||.+++.++.++|+.+++++|+.++...
T Consensus       100 ~~----~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~  140 (302)
T 1pja_A          100 KA----PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQM  140 (302)
T ss_dssp             HC----TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred             cC----CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcc
Confidence            32    478999999999999999999998646898888887643

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.54  E-value=8.4e-13  Score=153.28  Aligned_cols=227  Identities=19%  Similarity=0.332  Sum_probs=150.7

Q ss_pred             CccceeecCCceeEeCCCCCceEEEEecC------------------------------CceeEEEecccCCCCCCCcCC
Q psy463            1 MFTEEVLSSSSALWFSPSGNNLAYASFDD------------------------------NRTVIMTIPFYGNPGHPSSQY   50 (790)
Q Consensus         1 ~~~~~~~~~~~~~~wSPDG~~iaf~~~~~------------------------------~~~~~~~~~~~g~~~~~~~~~   50 (790)
                      +|+|| ++....++|||||++|||++.++                              ....++++++.+++...+.  
T Consensus       175 ~~~ee-~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~--  251 (706)
T 2z3z_A          175 VHQRE-FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ--  251 (706)
T ss_dssp             CGGGC-TTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC--
T ss_pred             hhhhh-cCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec--
Confidence            35566 57788999999999999998543                              3356777777766411000  


Q ss_pred             CccccCCCCccccccCCCcceeEe--eeecccceeEEEEeeCCCC-eeeEEEeecCCCCccccCCcccccc--CCceEEE
Q psy463           51 TQAINLREPVLSRVNWANESVVAA--WVNRVQNRARITRCSINEG-TCDVVFSRDLDRGWFEPFDHLRFSS--DGKKMLL  125 (790)
Q Consensus        51 ~~~~~~~~~~~~~~~w~~~~~~~~--~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~sp--dg~~i~~  125 (790)
                        ...........+.|++|++.+.  ..++.++...+.+++..++ .++.+.. .....|......+.|||  ||+. ++
T Consensus       252 --~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~sp~~dg~~-l~  327 (706)
T 2z3z_A          252 --TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV-ETDKHYVEPLHPLTFLPGSNNQF-IW  327 (706)
T ss_dssp             --CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EECSSCCCCCSCCEECTTCSSEE-EE
T ss_pred             --cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE-ccCCCeECccCCceeecCCCCEE-EE
Confidence              0001122345678999887553  4566778889999999988 5555544 33345654445689999  9984 44


Q ss_pred             EeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccce
Q psy463          126 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDH  205 (790)
Q Consensus       126 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (790)
                      .+..++          ..+||.++.+++.      ..+++.+.+.+..+..|+++++. ++|.+.. ..      ....+
T Consensus       328 ~~~~~g----------~~~l~~~~~~~~~------~~~l~~~~~~v~~~~~~spdg~~-l~~~~~~-~~------~~~~~  383 (706)
T 2z3z_A          328 QSRRDG----------WNHLYLYDTTGRL------IRQVTKGEWEVTNFAGFDPKGTR-LYFESTE-AS------PLERH  383 (706)
T ss_dssp             EECTTS----------SCEEEEEETTSCE------EEECCCSSSCEEEEEEECTTSSE-EEEEESS-SC------TTCBE
T ss_pred             EEccCC----------ccEEEEEECCCCE------EEecCCCCeEEEeeeEEcCCCCE-EEEEecC-CC------CceEE
Confidence            443332          3489999976552      67788898888888899998764 4454432 11      01259


Q ss_pred             eEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE-eccCcceEEEEEECCCCc
Q psy463          206 LTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV-NRVQNRARITRCSINEGT  282 (790)
Q Consensus       206 l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~-~r~~~~~~i~~~~~~~g~  282 (790)
                      ||.+++++++      ...++                 . ...+..++|||||+.+++. ........|+++++++++
T Consensus       384 l~~~d~~~~~------~~~l~-----------------~-~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          384 FYCIDIKGGK------TKDLT-----------------P-ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             EEEEETTCCC------CEESC-----------------C-SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             EEEEEcCCCC------ceecc-----------------C-CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence            9999998876      33443                 2 2235689999999954444 444445679999999887

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.54  E-value=1.2e-12  Score=152.22  Aligned_cols=262  Identities=12%  Similarity=0.093  Sum_probs=156.8

Q ss_pred             CceeEeCCCCCceEEEEecCCc--eeEEEecccCCCCCCCcCCCccccCCCCc--cccccCCCcceeEeeeecccc----
Q psy463           10 SSALWFSPSGNNLAYASFDDNR--TVIMTIPFYGNPGHPSSQYTQAINLREPV--LSRVNWANESVVAAWVNRVQN----   81 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~w~~~~~~~~~~~r~~~----   81 (790)
                      ...+.|||||++|||++.+.|.  ..|+++++.+|+         .+..+...  ...+.|++| +.+.+......    
T Consensus       165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~---------~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~  234 (741)
T 1yr2_A          165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK---------PLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQ  234 (741)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC---------EEEEEEEEEESCCCEESTT-SEEEEEECCCC----
T ss_pred             EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC---------CCCccCCCceeccEEEECC-CEEEEEEecCccccc
Confidence            4578999999999999988776  689999999986         22221111  245789999 77766654332    


Q ss_pred             -------eeEEEEeeCCCCee--eEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCC
Q psy463           82 -------RARITRCSINEGTC--DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD  152 (790)
Q Consensus        82 -------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~  152 (790)
                             ...+..++..++..  +.++.......+.   ..+.|||||++|+|.+......        ...||++++++
T Consensus       235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~---~~~~~SpDG~~l~~~~~~~~~~--------~~~l~~~d~~~  303 (741)
T 1yr2_A          235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG---HGASVSSDGRWVVITSSEGTDP--------VNTVHVARVTN  303 (741)
T ss_dssp             ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE---EEEEECTTSCEEEEEEECTTCS--------CCEEEEEEEET
T ss_pred             ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE---EEEEECCCCCEEEEEEEccCCC--------cceEEEEECCC
Confidence                   33456666655542  3333332222222   3578999999999877432100        22566666544


Q ss_pred             cCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccce
Q psy463          153 QAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV  232 (790)
Q Consensus       153 ~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~  232 (790)
                      +..                                                           +.     .+.|+      
T Consensus       304 ~~~-----------------------------------------------------------~~-----~~~l~------  313 (741)
T 1yr2_A          304 GKI-----------------------------------------------------------GP-----VTALI------  313 (741)
T ss_dssp             TEE-----------------------------------------------------------CC-----CEEEE------
T ss_pred             CCC-----------------------------------------------------------cc-----cEEec------
Confidence            310                                                           10     01111      


Q ss_pred             eehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCC--ceeEEEEEeCCCcccccCCceeEccCCC
Q psy463          233 TEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEG--TCDVVFSRDLDRGWFEPFDHLRFSSDGK  309 (790)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~spDg~  309 (790)
                                 ........+ |+|||+ +++.+++......|++++++++  ..+.++...  ...   ...+.|+  +.
T Consensus       314 -----------~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~--~~~---l~~~~~~--~~  374 (741)
T 1yr2_A          314 -----------PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES--KDN---LESVGIA--GN  374 (741)
T ss_dssp             -----------CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC--SSE---EEEEEEE--BT
T ss_pred             -----------CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC--CCe---EEEEEEE--CC
Confidence                       000011122 459999 5555555545678999999884  456665332  111   2234555  56


Q ss_pred             EEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcC-CCCceEEEE
Q psy463          310 KMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMY  387 (790)
Q Consensus       310 ~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~  387 (790)
                      .|++...    .+|      ..+|++++++++.      .+.|+.. ...+.. ++++||++.|+|.... ..|  ..||
T Consensus       375 ~lv~~~~----~dg------~~~l~~~~~~g~~------~~~l~~~~~~~v~~-~~~s~d~~~l~~~~ss~~~P--~~i~  435 (741)
T 1yr2_A          375 RLFASYI----HDA------KSQVLAFDLDGKP------AGAVSLPGIGSASG-LSGRPGDRHAYLSFSSFTQP--ATVL  435 (741)
T ss_dssp             EEEEEEE----ETT------EEEEEEEETTSCE------EEECBCSSSCEEEE-EECCBTCSCEEEEEEETTEE--EEEE
T ss_pred             EEEEEEE----ECC------EEEEEEEeCCCCc------eeeccCCCCeEEEE-eecCCCCCEEEEEEcCCCCC--CEEE
Confidence            6776655    566      6789999987665      6666642 333333 7899999988887655 333  7899


Q ss_pred             EEEcCCCCCCcceee
Q psy463          388 RINIADPTATPECIT  402 (790)
Q Consensus       388 ~~~~~~~~~~~~~lt  402 (790)
                      .+++.+  ++.+.+.
T Consensus       436 ~~d~~t--g~~~~l~  448 (741)
T 1yr2_A          436 ALDPAT--AKTTPWE  448 (741)
T ss_dssp             EEETTT--TEEEECS
T ss_pred             EEECCC--CcEEEEe
Confidence            999977  5544443

>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}

Probab=99.54  E-value=4.2e-13  Score=139.65  Aligned_cols=116  Identities=15%  Similarity=0.043  Sum_probs=78.1

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEc----CCCCCCChhhhHhhh
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYID----GRNSALKGNTLKYAG  555 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d----~rG~~~~g~~~~~~~  555 (790)
                      ..+.+..+.|.      ....|+||++||.+++..   .|.. ......+ +.||.|+.+|    ++|+|.+...     
T Consensus        24 ~~~~y~~~g~~------~~~~~~vvllHG~~~~~~---~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~~-----   88 (335)
T 2q0x_A           24 PYCKIPVFMMN------MDARRCVLWVGGQTESLL---SFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDHA-----   88 (335)
T ss_dssp             TTEEEEEEEEC------TTSSSEEEEECCTTCCTT---CSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCHH-----
T ss_pred             CceeEEEeccC------CCCCcEEEEECCCCcccc---chhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcccc-----
Confidence            45665555432      123478999999775421   2221 1123334 4799999995    5787765422     


Q ss_pred             hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc--CCCCceEEEEEeCCCCC
Q psy463          556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL--DPSNVFKCGISVAPVTD  621 (790)
Q Consensus       556 ~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~--~p~~~~~~~v~~~~~~~  621 (790)
                            ...+|+.+.++++.+.   .+..++.|+||||||.+++.++.+  +|. +++++|+.+|...
T Consensus        89 ------~~~~d~~~~~~~l~~~---l~~~~~~LvGhSmGG~iAl~~A~~~~~p~-rV~~lVL~~~~~~  146 (335)
T 2q0x_A           89 ------HDAEDVDDLIGILLRD---HCMNEVALFATSTGTQLVFELLENSAHKS-SITRVILHGVVCD  146 (335)
T ss_dssp             ------HHHHHHHHHHHHHHHH---SCCCCEEEEEEGGGHHHHHHHHHHCTTGG-GEEEEEEEEECCC
T ss_pred             ------CcHHHHHHHHHHHHHH---cCCCcEEEEEECHhHHHHHHHHHhccchh-ceeEEEEECCccc
Confidence                  2357788888888764   345799999999999999999884  564 8999998887643

>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A

Probab=99.54  E-value=7.1e-14  Score=143.65  Aligned_cols=268  Identities=7%  Similarity=-0.132  Sum_probs=145.2

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....          ..|+||++||.+++.   ..|.. +. ..++ ..|.|+++|+||+|.+....    ...
T Consensus        17 ~g~~l~~~~~g----------~~~~vv~lHG~~~~~---~~~~~-~~-~~L~-~~~~vi~~D~~G~G~S~~~~----~~~   76 (302)
T 1mj5_A           17 KGRRMAYIDEG----------TGDPILFQHGNPTSS---YLWRN-IM-PHCA-GLGRLIACDLIGMGDSDKLD----PSG   76 (302)
T ss_dssp             TTEEEEEEEES----------CSSEEEEECCTTCCG---GGGTT-TG-GGGT-TSSEEEEECCTTSTTSCCCS----SCS
T ss_pred             CCEEEEEEEcC----------CCCEEEEECCCCCch---hhhHH-HH-HHhc-cCCeEEEEcCCCCCCCCCCC----CCC
Confidence            78888876652          137899999998763   33432 22 3344 35899999999987654220    001


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCC-CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc---cccccchhh--
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDK-TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI---YYDTIYSER--  632 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~-~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~---~~~~~~~~~--  632 (790)
                      .....+.+..+.+..+++..   +. .+++|+||||||.+++.++.++|. +++++++.+|.....   .........  
T Consensus        77 ~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~  152 (302)
T 1mj5_A           77 PERYAYAEHRDYLDALWEAL---DLGDRVVLVVHDWGSALGFDWARRHRE-RVQGIAYMEAIAMPIEWADFPEQDRDLFQ  152 (302)
T ss_dssp             TTSSCHHHHHHHHHHHHHHT---TCTTCEEEEEEHHHHHHHHHHHHHTGG-GEEEEEEEEECCSCBCGGGSCGGGHHHHH
T ss_pred             cccccHHHHHHHHHHHHHHh---CCCceEEEEEECCccHHHHHHHHHCHH-HHhheeeecccCCchhhhhhhHHHHHHHH
Confidence            11245667776676666643   34 789999999999999999999885 899999888865421   110000000  


Q ss_pred             hcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhc-CcchhcccccCCCCcCCcch-h
Q psy463          633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA-DIMFQSQRYMGLPTFEDNLE-G  710 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~  710 (790)
                      .+..+  . ....+..  .......+.       ...............+...+... ........+........... .
T Consensus       153 ~~~~~--~-~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (302)
T 1mj5_A          153 AFRSQ--A-GEELVLQ--DNVFVEQVL-------PGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADV  220 (302)
T ss_dssp             HHHST--T-HHHHHTT--TCHHHHTHH-------HHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHH
T ss_pred             HHhcc--c-hhhhhcC--hHHHHHHHH-------HhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhh
Confidence            00000  0 0000000  000000000       00000011111111111110000 00000000000000000000 0


Q ss_pred             -hhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          711 -YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       711 -~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                       .........+.++ ++|+|+++|++|..+|++.++.+.+.++    . ++.++ ++||.+.. +++++.+.|.+||.+.
T Consensus       221 ~~~~~~~~~~l~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~  293 (302)
T 1mj5_A          221 VAIARDYAGWLSES-PIPKLFINAEPGALTTGRMRDFCRTWPN----Q-TEITV-AGAHFIQEDSPDEIGAAIAAFVRRL  293 (302)
T ss_dssp             HHHHHHHHHHHTTC-CSCEEEEEEEECSSSSHHHHHHHTTCSS----E-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhcc-CCCeEEEEeCCCCCCChHHHHHHHHhcC----C-ceEEe-cCcCcccccCHHHHHHHHHHHHHhh
Confidence             0111223566788 9999999999999999988777765543    3 77888 99999887 8899999999999875


Q ss_pred             h
Q psy463          789 F  789 (790)
Q Consensus       789 l  789 (790)
                      .
T Consensus       294 ~  294 (302)
T 1mj5_A          294 R  294 (302)
T ss_dssp             S
T ss_pred             c
Confidence            4

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.53  E-value=1.1e-12  Score=152.16  Aligned_cols=270  Identities=14%  Similarity=0.151  Sum_probs=165.6

Q ss_pred             ccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCc--ceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          117 SSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV--PVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       117 spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      +|||++++|.....+..        ...||+.+..+++.  +.+  ..+++.+......-..|+|+++. ++|.+...+.
T Consensus        80 ~~dG~~~~~~~~~~~~~--------~~~l~~~~~~~~~~--~~lld~~~l~~~~~~~~~~~~~SPDg~~-la~~~~~~G~  148 (710)
T 2xdw_A           80 FKKGKRYFYFYNTGLQN--------QRVLYVQDSLEGEA--RVFLDPNILSDDGTVALRGYAFSEDGEY-FAYGLSASGS  148 (710)
T ss_dssp             EEETTEEEEEEECSSCS--------SCEEEEESSTTSCC--EEEECGGGGCTTSCEEEEEEEECTTSSE-EEEEEEETTC
T ss_pred             EEECCEEEEEEEcCCce--------EEEEEEEcCCCCCc--EEEECHHHhccCCCEEEEEEEECCCCCE-EEEEEcCCCC
Confidence            59999999987643321        34899998766531  000  12344443223445688888764 6666543222


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCc-----
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQN-----  269 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~-----  269 (790)
                             ....||++|+++|+.      .+++                 ........++|||||+.++++.....     
T Consensus       149 -------~~~~i~v~d~~tg~~------~~~~-----------------~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~  198 (710)
T 2xdw_A          149 -------DWVTIKFMKVDGAKE------LPDV-----------------LERVKFSCMAWTHDGKGMFYNAYPQQDGKSD  198 (710)
T ss_dssp             -------SCEEEEEEETTTTEE------EEEE-----------------EEEECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred             -------ceEEEEEEECCCCCC------Cccc-----------------ccCcccceEEEEeCCCEEEEEEECCcccccc
Confidence                   124899999999873      2222                 00111346899999996666544332     


Q ss_pred             --------ceEEEEEECCCCcee--EEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcC
Q psy463          270 --------RARITRCSINEGTCD--VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLD  339 (790)
Q Consensus       270 --------~~~i~~~~~~~g~~~--~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~  339 (790)
                              ..+|+++++.++...  .++.......+   ...+.|||||++|++...    ....    ...+||++|++
T Consensus       199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~---~~~~~~SpDg~~l~~~~~----~~~~----~~~~l~~~d~~  267 (710)
T 2xdw_A          199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW---MGGAELSDDGRYVLLSIR----EGCD----PVNRLWYCDLQ  267 (710)
T ss_dssp             SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC---EEEEEECTTSCEEEEEEE----CSSS----SCCEEEEEEGG
T ss_pred             ccccccCCCCEEEEEECCCCcccceEEeccCCCCeE---EEEEEEcCCCCEEEEEEE----ccCC----CccEEEEEECc
Confidence                    356999999888653  34433211222   236899999999997654    1210    03589999997


Q ss_pred             C------CCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC---cceeeecccccCC
Q psy463          340 D------QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT---PECITCDLLTSAN  410 (790)
Q Consensus       340 ~------~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~---~~~lt~~~~~~~~  410 (790)
                      +      ++    ...+.|+.+.....  ..|++||+.|+|.++.+.+ ..+|+++++++  +.   .+.|+..     .
T Consensus       268 ~~~~~~~~~----~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~-~~~l~~~d~~~--~~~~~~~~l~~~-----~  333 (710)
T 2xdw_A          268 QESNGITGI----LKWVKLIDNFEGEY--DYVTNEGTVFTFKTNRHSP-NYRLINIDFTD--PEESKWKVLVPE-----H  333 (710)
T ss_dssp             GSSSSSCSS----CCCEEEECSSSSCE--EEEEEETTEEEEEECTTCT-TCEEEEEETTS--CCGGGCEEEECC-----C
T ss_pred             ccccccCCc----cceEEeeCCCCcEE--EEEeccCCEEEEEECCCCC-CCEEEEEeCCC--CCcccceeccCC-----C
Confidence            6      42    01556665443333  4589999999999887332 26899999976  33   2445442     1


Q ss_pred             CcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC-CeEEEec
Q psy463          411 QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG-QRLLYWD  453 (790)
Q Consensus       411 ~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~  453 (790)
                      ....+..+.|++ +..++++....+...|+++++.+ +..+.+.
T Consensus       334 ~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~  376 (710)
T 2xdw_A          334 EKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLATGALLKIFP  376 (710)
T ss_dssp             SSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred             CCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCCCCEEEecC
Confidence            123566788885 45576777666678899999844 4445443

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.53  E-value=8.2e-12  Score=130.18  Aligned_cols=312  Identities=12%  Similarity=0.041  Sum_probs=178.6

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...+++|||||+.||+....+. ...+..+..+        .+.....+...+..+.|++++..+.-..    .-.+.++
T Consensus        11 ~v~~~~~s~dg~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~h~~~v~~~~~~~~~~~l~~~~----dg~i~iw   77 (337)
T 1gxr_A           11 PAYSFHVTADGQMQPVPFPPDA-LIGPGIPRHA--------RQINTLNHGEVVCAVTISNPTRHVYTGG----KGCVKVW   77 (337)
T ss_dssp             ECCEEEECSSSCEEECCCCTTS-SSSTTCCSEE--------EEEEEECCSSCCCEEEECSSSSEEEEEC----BSEEEEE
T ss_pred             ceeEEEECCCCCEEEeecCCCc-EeccccCCcc--------ccceeccCCCceEEEEEecCCcEEEEcC----CCeEEEE
Confidence            3567899999999997654332 1111001000        0000111222334556777766554333    2345666


Q ss_pred             eCCCCeeeE-EEeec--CCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecc
Q psy463           89 SINEGTCDV-VFSRD--LDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  165 (790)
Q Consensus        89 ~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt  165 (790)
                      +..++.... +....  .....   .....|+|||+.|+..+.             -+.|.++++.+++.   .....+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~~~---~~~~~~~  138 (337)
T 1gxr_A           78 DISHPGNKSPVSQLDCLNRDNY---IRSCKLLPDGCTLIVGGE-------------ASTLSIWDLAAPTP---RIKAELT  138 (337)
T ss_dssp             ETTSTTCCSCSEEEECSCTTSB---EEEEEECTTSSEEEEEES-------------SSEEEEEECCCC-----EEEEEEE
T ss_pred             ECCCCCceeeeecccccCCCCc---EEEEEEcCCCCEEEEEcC-------------CCcEEEEECCCCCc---ceeeecc
Confidence            665543221 11111  11111   134689999998876542             12788888877631   0122222


Q ss_pred             ccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCC
Q psy463          166 RGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNV  245 (790)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~  245 (790)
                      .....+ .-+.|+++++  .++...           ....|.++++.+++.     ...+.                 ..
T Consensus       139 ~~~~~i-~~~~~~~~~~--~l~~~~-----------~dg~v~~~d~~~~~~-----~~~~~-----------------~~  182 (337)
T 1gxr_A          139 SSAPAC-YALAISPDSK--VCFSCC-----------SDGNIAVWDLHNQTL-----VRQFQ-----------------GH  182 (337)
T ss_dssp             CSSSCE-EEEEECTTSS--EEEEEE-----------TTSCEEEEETTTTEE-----EEEEC-----------------CC
T ss_pred             cCCCce-EEEEECCCCC--EEEEEe-----------CCCcEEEEeCCCCce-----eeeee-----------------cc
Confidence            222222 2345666554  333322           125788889887652     12222                 34


Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...+..+.|+|||+.++....+.   .|.++|+.+++.........      ......|+|||+.|+ +.+    .+|  
T Consensus       183 ~~~i~~~~~~~~~~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~-~~~----~~~--  246 (337)
T 1gxr_A          183 TDGASCIDISNDGTKLWTGGLDN---TVRSWDLREGRQLQQHDFTS------QIFSLGYCPTGEWLA-VGM----ESS--  246 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTS---EEEEEETTTTEEEEEEECSS------CEEEEEECTTSSEEE-EEE----TTS--
T ss_pred             cCceEEEEECCCCCEEEEEecCC---cEEEEECCCCceEeeecCCC------ceEEEEECCCCCEEE-EEc----CCC--
Confidence            55678999999999665554332   38999999887655544221      134789999999887 444    345  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL  405 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~  405 (790)
                            .|.++++.+++      ...+......+.. +.|+||++.|+..+.+     ..|...++..  ++......  
T Consensus       247 ------~i~~~~~~~~~------~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d-----g~i~~~~~~~--~~~~~~~~--  304 (337)
T 1gxr_A          247 ------NVEVLHVNKPD------KYQLHLHESCVLS-LKFAYCGKWFVSTGKD-----NLLNAWRTPY--GASIFQSK--  304 (337)
T ss_dssp             ------CEEEEETTSSC------EEEECCCSSCEEE-EEECTTSSEEEEEETT-----SEEEEEETTT--CCEEEEEE--
T ss_pred             ------cEEEEECCCCC------eEEEcCCccceeE-EEECCCCCEEEEecCC-----CcEEEEECCC--CeEEEEec--
Confidence                  58899998776      5555555545554 8899999988776655     3566667765  33322221  


Q ss_pred             cccCCCcccEEEEEEecCCcEEEEEe
Q psy463          406 LTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       406 ~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                           ....+..+.|+||+++++...
T Consensus       305 -----~~~~v~~~~~s~~~~~l~~~~  325 (337)
T 1gxr_A          305 -----ESSSVLSCDISVDDKYIVTGS  325 (337)
T ss_dssp             -----CSSCEEEEEECTTSCEEEEEE
T ss_pred             -----CCCcEEEEEECCCCCEEEEec
Confidence                 345678899999999886654

>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}

Probab=99.53  E-value=3.2e-13  Score=128.38  Aligned_cols=168  Identities=13%  Similarity=0.027  Sum_probs=116.7

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      +.|.||++||.+++..  ..|... ....+. .+   +.++.+|.+.               ..+.+..+.+..+.+.  
T Consensus        16 ~~~~vv~~HG~~~~~~--~~~~~~-~~~~~~-~~---~~v~~~~~~~---------------~~~~~~~~~~~~~~~~--   71 (191)
T 3bdv_A           16 QQLTMVLVPGLRDSDD--EHWQSH-WERRFP-HW---QRIRQREWYQ---------------ADLDRWVLAIRRELSV--   71 (191)
T ss_dssp             TTCEEEEECCTTCCCT--TSHHHH-HHHHCT-TS---EECCCSCCSS---------------CCHHHHHHHHHHHHHT--
T ss_pred             CCceEEEECCCCCCch--hhHHHH-HHHhcC-Ce---EEEeccCCCC---------------cCHHHHHHHHHHHHHh--
Confidence            3578999999987631  222221 111222 33   4456665321               3355666666666652  


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR  659 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  659 (790)
                       .+ .+++++||||||.+++.++.++|. +++++++.+|......          ..+                      
T Consensus        72 -~~-~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~----------~~~----------------------  116 (191)
T 3bdv_A           72 -CT-QPVILIGHSFGALAACHVVQQGQE-GIAGVMLVAPAEPMRF----------EID----------------------  116 (191)
T ss_dssp             -CS-SCEEEEEETHHHHHHHHHHHTTCS-SEEEEEEESCCCGGGG----------TCT----------------------
T ss_pred             -cC-CCeEEEEEChHHHHHHHHHHhcCC-CccEEEEECCCccccc----------cCc----------------------
Confidence             33 799999999999999999998875 8999999988643210          000                      


Q ss_pred             CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCccc
Q psy463          660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV  739 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v  739 (790)
                                                    . .                         ..+.++ ++|+|+++|++|..+
T Consensus       117 ------------------------------~-~-------------------------~~~~~~-~~P~lii~g~~D~~~  139 (191)
T 3bdv_A          117 ------------------------------D-R-------------------------IQASPL-SVPTLTFASHNDPLM  139 (191)
T ss_dssp             ------------------------------T-T-------------------------SCSSCC-SSCEEEEECSSBTTB
T ss_pred             ------------------------------c-c-------------------------cccccC-CCCEEEEecCCCCcC
Confidence                                          0 0                         123456 899999999999999


Q ss_pred             chhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHHHHh
Q psy463          740 HFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFLDSC  788 (790)
Q Consensus       740 ~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl~~~  788 (790)
                      |++.++.+.+.+     .++++++++++|.+..    ...+..+.+.+||++.
T Consensus       140 ~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~  187 (191)
T 3bdv_A          140 SFTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEIL  187 (191)
T ss_dssp             CHHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHh
Confidence            999999998876     2589999999999875    4566779999999865

>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}

Probab=99.53  E-value=4.2e-14  Score=149.19  Aligned_cols=114  Identities=18%  Similarity=0.062  Sum_probs=75.7

Q ss_pred             CccEEEEEcCCCCcccccc--cccc----------chHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc---cCC-ccc
Q psy463          500 KYPLLIHVYGGPSSFQVTE--RFSV----------DWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR---RLG-TVE  563 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~--~~~~----------~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~---~~~-~~~  563 (790)
                      ..|+||++||+++......  .|..          .+. ..++++||.|+++|+||+|.+..... ...+   .+. ...
T Consensus        49 ~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~  126 (354)
T 2rau_A           49 GNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIV-LYLARNGFNVYTIDYRTHYVPPFLKD-RQLSFTANWGWSTW  126 (354)
T ss_dssp             CEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHH-HHHHHTTEEEEEEECGGGGCCTTCCG-GGGGGGTTCSHHHH
T ss_pred             CCCEEEEECCCCCCccccccccccccccccccchhhHH-HHHHhCCCEEEEecCCCCCCCCcccc-cccccccCCcHHHH
Confidence            4588999999987632100  2221          233 34445799999999999776542211 0011   111 123


Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCC
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPV  619 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~  619 (790)
                      ++|+.++++++.++   .+..+++++||||||.+++.++.++ |. +++++++.++.
T Consensus       127 ~~d~~~~~~~l~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~~p~-~v~~lvl~~~~  179 (354)
T 2rau_A          127 ISDIKEVVSFIKRD---SGQERIYLAGESFGGIAALNYSSLYWKN-DIKGLILLDGG  179 (354)
T ss_dssp             HHHHHHHHHHHHHH---HCCSSEEEEEETHHHHHHHHHHHHHHHH-HEEEEEEESCS
T ss_pred             HHHHHHHHHHHHHh---cCCceEEEEEECHhHHHHHHHHHhcCcc-ccceEEEeccc
Confidence            56777788887663   3457999999999999999999987 75 89988888654

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.53  E-value=7e-13  Score=139.33  Aligned_cols=242  Identities=10%  Similarity=0.107  Sum_probs=152.1

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      .|++  ||++|+|.........+    ....+||++++++++      ..++ .    ...-..|+|+++. ++|.+...
T Consensus        19 ~~~~--dG~~i~~~~~~~~~~~~----~~~~~l~~~d~~~~~------~~~l-~----~~~~~~~SpDg~~-la~~~~~~   80 (347)
T 2gop_A           19 DPRT--KGELVAYVLTKANLKDN----KYENTIVIENLKNNA------RRFI-E----NATMPRISPDGKK-IAFMRANE   80 (347)
T ss_dssp             EEEE--ETTEEEEEEEEEETTTT----EEEEEEEEEETTTCC------EEEE-E----SCEEEEECTTSSE-EEEEEEET
T ss_pred             cceE--CCcEEEEEEeecCcccC----CccceEEEEeCCCCc------eEEc-c----cCCCeEECCCCCE-EEEEEecc
Confidence            4677  99999998653321111    113489999998874      3444 1    1123578888765 66665431


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEecc-----
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRV-----  267 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~-----  267 (790)
                      ..       ...+||++++++++      ..+++                 .... +..+.|||||+.+++....     
T Consensus        81 ~~-------~~~~l~~~~~~~g~------~~~l~-----------------~~~~-~~~~~wspdg~~l~~~~~~~~~~~  129 (347)
T 2gop_A           81 EK-------KVSEIWVADLETLS------SKKIL-----------------EAKN-IRSLEWNEDSRKLLIVGFKRREDE  129 (347)
T ss_dssp             TT-------TEEEEEEEETTTTE------EEEEE-----------------EESE-EEEEEECTTSSEEEEEEECCCC--
T ss_pred             CC-------CcceEEEEECCCCc------eEEEE-----------------cCCC-ccceeECCCCCEEEEEEccCCCcC
Confidence            10       12579999999887      45555                 2233 7889999999955554321     


Q ss_pred             -------------------CcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          268 -------------------QNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       268 -------------------~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                                         .....|+++++.+++. +.++. ..       ...+.|||||  ++|....    ++..+.
T Consensus       130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~~-------~~~~~~spdg--~~~~~~~----~~~~~~  195 (347)
T 2gop_A          130 DFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-PR-------FSSGIWHRDK--IVVNVPH----REIIPQ  195 (347)
T ss_dssp             -------CCCC---------CEEEEEEEETTTTEEEEEEEE-ET-------TCEEEEETTE--EEEEEEC----CCSSCC
T ss_pred             CcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-CC-------cccccCCCCe--EEEEEec----cccccc
Confidence                               1135799999999988 66665 21       4589999999  6656541    110000


Q ss_pred             Cc-ccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCC---CceEEEEEEEcCCCCCCcceeee
Q psy463          328 DS-WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS---PIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       328 ~~-~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~---~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                      .. ..+||++|  +++      .+.|+.+ ...   ..++|||+.|+|.+....   ....+||.++  +  ++.+.++.
T Consensus       196 ~~~~~~l~~~d--~~~------~~~l~~~-~~~---~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~--~~~~~l~~  259 (347)
T 2gop_A          196 YFKFWDIYIWE--DGK------EEKMFEK-VSF---YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--G--KEVMGILD  259 (347)
T ss_dssp             SSCCEEEEEEE--TTE------EEEEEEE-ESE---EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--S--SCEEESST
T ss_pred             ccccccEEEeC--CCc------eEEeccC-cce---eeECCCCCEEEEEEccccCCccccceEEEEC--C--CceEeccc
Confidence            00 34899999  665      6677654 222   334999999999986521   1236899998  3  45566654


Q ss_pred             cccccCCCcccEEE-EEEecCCcEEEEEeecCCCCeEEEEe
Q psy463          404 DLLTSANQKCSYSG-ATFSTNVSYYVLSCIGPGIPEIMLFD  443 (790)
Q Consensus       404 ~~~~~~~~~~~~~~-~~~s~dg~~~~~~~~~~~~~~i~~~~  443 (790)
                      .      ....+.. +.|+ |+  +++.....+...|| ++
T Consensus       260 ~------~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~  290 (347)
T 2gop_A          260 E------VDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IW  290 (347)
T ss_dssp             T------CCSEEEEEEEET-TE--EEEEEEETTEEEEE-EE
T ss_pred             c------CCcccCCccEEc-Cc--EEEEEecCCcEEEE-Ec
Confidence            2      2345565 8899 87  55665555556677 77

>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A

Probab=99.52  E-value=1.3e-13  Score=142.91  Aligned_cols=115  Identities=10%  Similarity=-0.031  Sum_probs=80.1

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....        .+..|.||++||.+++.   ..|..  ....++ ..|.|+++|+||+|.+...       .
T Consensus        29 ~g~~l~y~~~G--------~g~~~~vvllHG~~~~~---~~w~~--~~~~L~-~~~~via~Dl~GhG~S~~~-------~   87 (318)
T 2psd_A           29 LDSFINYYDSE--------KHAENAVIFLHGNATSS---YLWRH--VVPHIE-PVARCIIPDLIGMGKSGKS-------G   87 (318)
T ss_dssp             TTEEEEEEECC--------SCTTSEEEEECCTTCCG---GGGTT--TGGGTT-TTSEEEEECCTTSTTCCCC-------T
T ss_pred             CCeEEEEEEcC--------CCCCCeEEEECCCCCcH---HHHHH--HHHHhh-hcCeEEEEeCCCCCCCCCC-------C
Confidence            78788766532        22236899999998762   33432  223344 3579999999998875432       0


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCC-CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDK-TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP  618 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~-~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~  618 (790)
                      .+...+++..+.+..+++.   ++. .++.|+||||||.+++.+|.++|+ +++++|+.++
T Consensus        88 ~~~~~~~~~a~dl~~ll~~---l~~~~~~~lvGhSmGg~ia~~~A~~~P~-~v~~lvl~~~  144 (318)
T 2psd_A           88 NGSYRLLDHYKYLTAWFEL---LNLPKKIIFVGHDWGAALAFHYAYEHQD-RIKAIVHMES  144 (318)
T ss_dssp             TSCCSHHHHHHHHHHHHTT---SCCCSSEEEEEEEHHHHHHHHHHHHCTT-SEEEEEEEEE
T ss_pred             CCccCHHHHHHHHHHHHHh---cCCCCCeEEEEEChhHHHHHHHHHhChH-hhheEEEecc
Confidence            1123466777777777663   334 789999999999999999999986 8888887654

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.51  E-value=2.3e-11  Score=131.97  Aligned_cols=290  Identities=12%  Similarity=0.088  Sum_probs=167.1

Q ss_pred             cccCCCcceeEeeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCC
Q psy463           63 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  142 (790)
Q Consensus        63 ~~~w~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~  142 (790)
                      .+.|++++..+.-..+.   ..+.+++..++++..........+-........|+|+|+.++ +...+            
T Consensus       127 ~~~~s~~~~~~~~~~~~---~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-s~~~d------------  190 (433)
T 3bws_A          127 SVRFIDNTRLAIPLLED---EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWV-SQMQA------------  190 (433)
T ss_dssp             CCEESSSSEEEEEBTTS---SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEE-EEGGG------------
T ss_pred             EEEEeCCCeEEEEeCCC---CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEE-EECCC------------
Confidence            34566644433222222   236677777776654322111000000112357888887443 33322            


Q ss_pred             cEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCC
Q psy463          143 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  222 (790)
Q Consensus       143 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  222 (790)
                      +.|+++++++++     ....+......+ .-..|+++++  .+|++...          ...|+++|+.+++.      
T Consensus       191 ~~v~~~d~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~--~l~~~~~~----------~~~i~~~d~~~~~~------  246 (433)
T 3bws_A          191 NAVHVFDLKTLA-----YKATVDLTGKWS-KILLYDPIRD--LVYCSNWI----------SEDISVIDRKTKLE------  246 (433)
T ss_dssp             TEEEEEETTTCC-----EEEEEECSSSSE-EEEEEETTTT--EEEEEETT----------TTEEEEEETTTTEE------
T ss_pred             CEEEEEECCCce-----EEEEEcCCCCCe-eEEEEcCCCC--EEEEEecC----------CCcEEEEECCCCcE------
Confidence            279999988763     223333222222 3346777665  45444321          15899999987652      


Q ss_pred             ccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccC-----cceEEEEEECCCCceeEEEEEeCCCcccc
Q psy463          223 VPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQ-----NRARITRCSINEGTCDVVFSRDLDRGWFE  297 (790)
Q Consensus       223 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~-----~~~~i~~~~~~~g~~~~l~~~~~~~~~~~  297 (790)
                      ....                 ........+.|+|||+.++......     ....|+++|+.+++.........      
T Consensus       247 ~~~~-----------------~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~------  303 (433)
T 3bws_A          247 IRKT-----------------DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG------  303 (433)
T ss_dssp             EEEC-----------------CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE------
T ss_pred             EEEe-----------------cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC------
Confidence            1111                 2334578899999999655554322     23469999999887765543321      


Q ss_pred             cCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEc
Q psy463          298 PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLST  377 (790)
Q Consensus       298 ~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~  377 (790)
                      ....+.|+|||+.+++..+    .++        .|.++|+.+++     ....+.. ...+.. ++|+|||+.|++...
T Consensus       304 ~~~~~~~~~~g~~l~~~~~----~~~--------~v~v~d~~~~~-----~~~~~~~-~~~~~~-~~~s~dg~~l~~~~~  364 (433)
T 3bws_A          304 NKRHIVSGNTENKIYVSDM----CCS--------KIEVYDLKEKK-----VQKSIPV-FDKPNT-IALSPDGKYLYVSCR  364 (433)
T ss_dssp             CEEEEEECSSTTEEEEEET----TTT--------EEEEEETTTTE-----EEEEEEC-SSSEEE-EEECTTSSEEEEEEC
T ss_pred             CcceEEECCCCCEEEEEec----CCC--------EEEEEECCCCc-----EEEEecC-CCCCCe-EEEcCCCCEEEEEec
Confidence            1346899999998885544    344        79999998776     1223332 223333 889999998888776


Q ss_pred             CCCC----------ceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          378 QGSP----------IVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       378 ~~~~----------~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      ....          ....|+.+++.+  ++......       .......+.|+|||++++......  ..|.+++++
T Consensus       365 ~~~~~~~~~~~~g~~dg~v~~~d~~~--~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~~~~d--~~i~v~~~~  431 (433)
T 3bws_A          365 GPNHPTEGYLKKGLVLGKVYVIDTTT--DTVKEFWE-------AGNQPTGLDVSPDNRYLVISDFLD--HQIRVYRRD  431 (433)
T ss_dssp             CCCCTTTCTTSCCSSCCEEEEEETTT--TEEEEEEE-------CSSSEEEEEECTTSCEEEEEETTT--TEEEEEEET
T ss_pred             CCCccccccccccccceEEEEEECCC--CcEEEEec-------CCCCCceEEEcCCCCEEEEEECCC--CeEEEEEec
Confidence            4211          124789999876  44333222       233567899999999987664322  356666543

>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}

Probab=99.50  E-value=4.7e-14  Score=144.28  Aligned_cols=240  Identities=13%  Similarity=0.075  Sum_probs=127.9

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |+||++||++.... ...|.  .....++ .||.|+++|+||+|.+...       ......++++.+.+..+++.++  
T Consensus        42 p~vv~lHG~G~~~~-~~~~~--~~~~~L~-~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~~~--  108 (292)
T 3l80_A           42 PCFVFLSGAGFFST-ADNFA--NIIDKLP-DSIGILTIDAPNSGYSPVS-------NQANVGLRDWVNAILMIFEHFK--  108 (292)
T ss_dssp             SEEEEECCSSSCCH-HHHTH--HHHTTSC-TTSEEEEECCTTSTTSCCC-------CCTTCCHHHHHHHHHHHHHHSC--
T ss_pred             CEEEEEcCCCCCcH-HHHHH--HHHHHHh-hcCeEEEEcCCCCCCCCCC-------CcccccHHHHHHHHHHHHHHhC--
Confidence            89999997432211 12222  2233444 6999999999998765411       1112457777777777776443  


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch-------hhhcCCCCccCchhh-hhhccccc
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS-------ERYMGLPTFEDNLEG-YKIAALNN  653 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~-~~~~~~~~  653 (790)
                       .+++.|+||||||.+++.++.++|+ +++++++.+|......+.....       .......  ...... +...    
T Consensus       109 -~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----  180 (292)
T 3l80_A          109 -FQSYLLCVHSIGGFAALQIMNQSSK-ACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLK--TAADRLNYLKD----  180 (292)
T ss_dssp             -CSEEEEEEETTHHHHHHHHHHHCSS-EEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCC--SHHHHHHHHHH----
T ss_pred             -CCCeEEEEEchhHHHHHHHHHhCch-heeeEEEECCCCcchhhhccccccchhHHHHHHHHh--ccCchhhhHhh----
Confidence             4699999999999999999999985 8999998886432111000000       0000000  000000 0000    


Q ss_pred             hhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEec
Q psy463          654 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHG  733 (790)
Q Consensus       654 ~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G  733 (790)
                      ....... +       ................+......      .....+    ..+........+.+  ++|+|+++|
T Consensus       181 ~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~----~~~~~~~~~~~l~~--~~P~lii~g  240 (292)
T 3l80_A          181 LSRSHFS-S-------QQFKQLWRGYDYCQRQLNDVQSL------PDFKIR----LALGEEDFKTGISE--KIPSIVFSE  240 (292)
T ss_dssp             HHHHHSC-H-------HHHHHHHHHHHHHHHHHHTTTTS------TTCCSS----CCCCGGGGCCCCCT--TSCEEEEEC
T ss_pred             ccccccC-H-------HHHHHhHHHHHHHHHHHHhhhhc------cccchh----hhhcchhhhhccCC--CCCEEEEEc
Confidence            0000000 0       00000000001111111111110      000000    00000011111222  689999999


Q ss_pred             CCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463          734 TMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF  789 (790)
Q Consensus       734 ~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l  789 (790)
                      +.|..++++ + .+.+.+..    .+ +++++++|.+.. +++++.+.|.+||+++-
T Consensus       241 ~~D~~~~~~-~-~~~~~~~~----~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~  290 (292)
T 3l80_A          241 SFREKEYLE-S-EYLNKHTQ----TK-LILCGQHHYLHWSETNSILEKVEQLLSNHE  290 (292)
T ss_dssp             GGGHHHHHT-S-TTCCCCTT----CE-EEECCSSSCHHHHCHHHHHHHHHHHHHTCT
T ss_pred             cCccccchH-H-HHhccCCC----ce-eeeCCCCCcchhhCHHHHHHHHHHHHHhcc
Confidence            999999988 6 66544332    36 899999999887 88999999999998763

>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A

Probab=99.50  E-value=2.1e-13  Score=128.34  Aligned_cols=169  Identities=9%  Similarity=-0.094  Sum_probs=116.5

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCe---EEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHh
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI---VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN  577 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~---~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~  577 (790)
                      .|+||++||.++..   ..|. .+. ..+++.||   .|+.+|++|.+.+..            ...+++.+.+..+.+.
T Consensus         3 ~~~vv~~HG~~~~~---~~~~-~~~-~~l~~~G~~~~~v~~~d~~g~g~s~~------------~~~~~~~~~~~~~~~~   65 (181)
T 1isp_A            3 HNPVVMVHGIGGAS---FNFA-GIK-SYLVSQGWSRDKLYAVDFWDKTGTNY------------NNGPVLSRFVQKVLDE   65 (181)
T ss_dssp             CCCEEEECCTTCCG---GGGH-HHH-HHHHHTTCCGGGEEECCCSCTTCCHH------------HHHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCcCCCH---hHHH-HHH-HHHHHcCCCCccEEEEecCCCCCchh------------hhHHHHHHHHHHHHHH
Confidence            36789999988762   3333 233 34445788   599999999775432            1245555556665553


Q ss_pred             CCCcCCCceEEEEechHHHHHHHHHhcC--CCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchh
Q psy463          578 LPYIDKTRTAIWGWSYGGYATGLALALD--PSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV  655 (790)
Q Consensus       578 ~~~~d~~ri~i~G~S~GG~~a~~~a~~~--p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  655 (790)
                         .+..++.++||||||.+++.++.++  |. .++++++.+|.......                              
T Consensus        66 ---~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~-~v~~~v~~~~~~~~~~~------------------------------  111 (181)
T 1isp_A           66 ---TGAKKVDIVAHSMGGANTLYYIKNLDGGN-KVANVVTLGGANRLTTG------------------------------  111 (181)
T ss_dssp             ---HCCSCEEEEEETHHHHHHHHHHHHSSGGG-TEEEEEEESCCGGGTCS------------------------------
T ss_pred             ---cCCCeEEEEEECccHHHHHHHHHhcCCCc-eEEEEEEEcCccccccc------------------------------
Confidence               3457899999999999999999876  54 88999988886332100                              


Q ss_pred             hhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCC
Q psy463          656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTM  735 (790)
Q Consensus       656 ~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~  735 (790)
                      ..+.                              +.                            .... ++|+|+++|++
T Consensus       112 ~~~~------------------------------~~----------------------------~~~~-~~p~l~i~G~~  132 (181)
T 1isp_A          112 KALP------------------------------GT----------------------------DPNQ-KILYTSIYSSA  132 (181)
T ss_dssp             BCCC------------------------------CS----------------------------CTTC-CCEEEEEEETT
T ss_pred             ccCC------------------------------CC----------------------------CCcc-CCcEEEEecCC
Confidence            0000                              00                            0012 68999999999


Q ss_pred             CcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463          736 DDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC  788 (790)
Q Consensus       736 D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~  788 (790)
                      |..+|++.+.         -...+++++++++|.+.....++.+.+.+||.+.
T Consensus       133 D~~v~~~~~~---------~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~  176 (181)
T 1isp_A          133 DMIVMNYLSR---------LDGARNVQIHGVGHIGLLYSSQVNSLIKEGLNGG  176 (181)
T ss_dssp             CSSSCHHHHC---------CBTSEEEEESSCCTGGGGGCHHHHHHHHHHHTTT
T ss_pred             Cccccccccc---------CCCCcceeeccCchHhhccCHHHHHHHHHHHhcc
Confidence            9999987432         2245889999999998773358999999999753

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.50  E-value=4.4e-12  Score=146.46  Aligned_cols=265  Identities=14%  Similarity=0.105  Sum_probs=166.9

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc------eEEEEEEeeeccCCccEEE
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR------FTVTEILAWDERENNPLLI  187 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~------~~~~~~~~~~~~~~~~~~~  187 (790)
                      +..+|||++++|.....+..        ...||+.+..++.      ..+|++..      .....-..|+|+++. +.|
T Consensus        73 ~~p~~dG~~~~~~~~~~~~~--------~~~l~~~~~~~~~------~~~l~d~~~~a~~~~~~~~~~~~SPDG~~-la~  137 (695)
T 2bkl_A           73 STPSRRNGRFFYVRTHKDKE--------KAILYWRQGESGQ------EKVLLDPNGWSKDGTVSLGTWAVSWDGKK-VAF  137 (695)
T ss_dssp             CCCEEETTEEEEEEECTTCS--------SCEEEEEESTTSC------CEEEECGGGSSSSSCEEEEEEEECTTSSE-EEE
T ss_pred             CCCEEECCEEEEEEEcCCCe--------EEEEEEEcCCCCC------cEEEEchHHhccCCCEEEEEEEECCCCCE-EEE
Confidence            45579999999988644321        3489999987663      34454321      123344678887765 666


Q ss_pred             EecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEecc
Q psy463          188 LSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRV  267 (790)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~  267 (790)
                      .....++       ....|+++|+++|+...   ...++                 ...  ...++|||||+.++++..+
T Consensus       138 ~~~~~G~-------~~~~i~v~dl~tg~~~~---~~~~~-----------------~~~--~~~~~wspDg~~l~~~~~d  188 (695)
T 2bkl_A          138 AQKPNAA-------DEAVLHVIDVDSGEWSK---VDVIE-----------------GGK--YATPKWTPDSKGFYYEWLP  188 (695)
T ss_dssp             EEEETTC-------SCCEEEEEETTTCCBCS---SCCBS-----------------CCT--TCCCEECTTSSEEEEEECC
T ss_pred             EECCCCC-------ceEEEEEEECCCCCCcC---CcccC-----------------ccc--ccceEEecCCCEEEEEEec
Confidence            6543222       12689999999987320   01121                 111  1468999999966665443


Q ss_pred             C----------cceEEEEEECCCCce--eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEE
Q psy463          268 Q----------NRARITRCSINEGTC--DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTF  335 (790)
Q Consensus       268 ~----------~~~~i~~~~~~~g~~--~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~  335 (790)
                      .          ...+|+++++.++..  +.++.......+   ...+.|||||++|++...   +..+      ..+||+
T Consensus       189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~---~~~~~~SpDG~~l~~~~~---~~~~------~~~l~~  256 (695)
T 2bkl_A          189 TDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT---FLQSDLSRDGKYLFVYIL---RGWS------ENDVYW  256 (695)
T ss_dssp             CCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC---EEEEEECTTSCCEEEEEE---ETTT------EEEEEE
T ss_pred             CCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEE---EEEEEECCCCCEEEEEEe---CCCC------ceEEEE
Confidence            2          245799999998874  344443221122   237899999999987655   2214      568999


Q ss_pred             EEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc---ceeeecccccCCCc
Q psy463          336 IDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP---ECITCDLLTSANQK  412 (790)
Q Consensus       336 ~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~---~~lt~~~~~~~~~~  412 (790)
                      ++..+++      .+.|+........ +.| +||+ +|+.++.+. ....|+++++++  ++.   +.|+..     ...
T Consensus       257 ~~~~~~~------~~~l~~~~~~~~~-~~~-~~g~-l~~~s~~~~-~~~~l~~~d~~~--~~~~~~~~l~~~-----~~~  319 (695)
T 2bkl_A          257 KRPGEKD------FRLLVKGVGAKYE-VHA-WKDR-FYVLTDEGA-PRQRVFEVDPAK--PARASWKEIVPE-----DSS  319 (695)
T ss_dssp             ECTTCSS------CEEEEECSSCCEE-EEE-ETTE-EEEEECTTC-TTCEEEEEBTTB--CSGGGCEEEECC-----CSS
T ss_pred             EcCCCCc------eEEeecCCCceEE-EEe-cCCc-EEEEECCCC-CCCEEEEEeCCC--CCccCCeEEecC-----CCC
Confidence            9877776      7777765433333 445 7888 888887532 127899999976  442   444431     113


Q ss_pred             ccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEec
Q psy463          413 CSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       413 ~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  453 (790)
                      ..+.+++++  +..++++....+...|++++++++..+.+.
T Consensus       320 ~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~  358 (695)
T 2bkl_A          320 ASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQ  358 (695)
T ss_dssp             CEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECC
T ss_pred             CeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEec
Confidence            345667777  456777777666788999998776555543

>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*

Probab=99.49  E-value=1.6e-13  Score=138.90  Aligned_cols=116  Identities=14%  Similarity=0.040  Sum_probs=80.6

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....+       +...|.||++||.+++   ...|..  ....++ .+|.|+++|+||+|.+...        
T Consensus        12 ~g~~l~y~~~~~-------G~~~p~vvllHG~~~~---~~~w~~--~~~~L~-~~~rvia~DlrGhG~S~~~--------   70 (276)
T 2wj6_A           12 FDNKLSYIDNQR-------DTDGPAILLLPGWCHD---HRVYKY--LIQELD-ADFRVIVPNWRGHGLSPSE--------   70 (276)
T ss_dssp             TTEEEEEEECCC-------CCSSCEEEEECCTTCC---GGGGHH--HHHHHT-TTSCEEEECCTTCSSSCCC--------
T ss_pred             CCeEEEEEEecC-------CCCCCeEEEECCCCCc---HHHHHH--HHHHHh-cCCEEEEeCCCCCCCCCCC--------
Confidence            788887765311       2233789999998876   233432  233455 5799999999998876432        


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPV  619 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~  619 (790)
                      .....++++.+.+..+++.++   .+++.|+||||||.+++.++.++ |+ +++.+|+.++.
T Consensus        71 ~~~~~~~~~a~dl~~ll~~l~---~~~~~lvGhSmGG~va~~~A~~~~P~-rv~~lvl~~~~  128 (276)
T 2wj6_A           71 VPDFGYQEQVKDALEILDQLG---VETFLPVSHSHGGWVLVELLEQAGPE-RAPRGIIMDWL  128 (276)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHT---CCSEEEEEEGGGHHHHHHHHHHHHHH-HSCCEEEESCC
T ss_pred             CCCCCHHHHHHHHHHHHHHhC---CCceEEEEECHHHHHHHHHHHHhCHH-hhceEEEeccc
Confidence            012346666666666665333   47899999999999999999998 85 78888877654

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.49  E-value=3e-11  Score=129.05  Aligned_cols=267  Identities=10%  Similarity=0.065  Sum_probs=166.4

Q ss_pred             EEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCccee
Q psy463           84 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  163 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~  163 (790)
                      .+.+++..++++...+.....      .....|+|||+.|++....++            .|+++++.+++     ....
T Consensus        13 ~v~v~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~~~~d~------------~i~v~d~~~~~-----~~~~   69 (391)
T 1l0q_A           13 NISVIDVTSNKVTATIPVGSN------PMGAVISPDGTKVYVANAHSN------------DVSIIDTATNN-----VIAT   69 (391)
T ss_dssp             EEEEEETTTTEEEEEEECSSS------EEEEEECTTSSEEEEEEGGGT------------EEEEEETTTTE-----EEEE
T ss_pred             EEEEEECCCCeEEEEeecCCC------cceEEECCCCCEEEEECCCCC------------eEEEEECCCCe-----EEEE
Confidence            355566666665544432211      134689999999877664433            89999998774     2333


Q ss_pred             ccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCC
Q psy463          164 LTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKEN  243 (790)
Q Consensus       164 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~  243 (790)
                      +..+. .+ .-+.|+++++  .+++....          ...|+++|+.+++.      ....                 
T Consensus        70 ~~~~~-~v-~~~~~spdg~--~l~~~~~~----------~~~v~v~d~~~~~~------~~~~-----------------  112 (391)
T 1l0q_A           70 VPAGS-SP-QGVAVSPDGK--QVYVTNMA----------SSTLSVIDTTSNTV------AGTV-----------------  112 (391)
T ss_dssp             EECSS-SE-EEEEECTTSS--EEEEEETT----------TTEEEEEETTTTEE------EEEE-----------------
T ss_pred             EECCC-Cc-cceEECCCCC--EEEEEECC----------CCEEEEEECCCCeE------EEEE-----------------
Confidence            33333 22 3356777766  44443321          15899999988763      1111                 


Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ........+.|+|||+.++++....  ..|+++|+.++++........      ......|+|||+.|++...    .++
T Consensus       113 ~~~~~~~~~~~s~dg~~l~~~~~~~--~~v~~~d~~~~~~~~~~~~~~------~~~~~~~~~dg~~l~~~~~----~~~  180 (391)
T 1l0q_A          113 KTGKSPLGLALSPDGKKLYVTNNGD--KTVSVINTVTKAVINTVSVGR------SPKGIAVTPDGTKVYVANF----DSM  180 (391)
T ss_dssp             ECSSSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEECCS------SEEEEEECTTSSEEEEEET----TTT
T ss_pred             eCCCCcceEEECCCCCEEEEEeCCC--CEEEEEECCCCcEEEEEecCC------CcceEEECCCCCEEEEEeC----CCC
Confidence            1223457899999999665544322  249999999987765554321      1347899999998875443    344


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                              .|+++|+.+++      ..........+.. +.|+|||+.|+..+....  ...|+.+++.+  ++......
T Consensus       181 --------~v~~~d~~~~~------~~~~~~~~~~~~~-~~~~~~g~~l~~~~~~~~--~~~v~~~d~~~--~~~~~~~~  241 (391)
T 1l0q_A          181 --------SISVIDTVTNS------VIDTVKVEAAPSG-IAVNPEGTKAYVTNVDKY--FNTVSMIDTGT--NKITARIP  241 (391)
T ss_dssp             --------EEEEEETTTTE------EEEEEECSSEEEE-EEECTTSSEEEEEEECSS--CCEEEEEETTT--TEEEEEEE
T ss_pred             --------EEEEEECCCCe------EEEEEecCCCccc-eEECCCCCEEEEEecCcC--CCcEEEEECCC--CeEEEEEe
Confidence                    79999998876      3332222333444 789999999888875311  15788888876  43322222


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                             .......+.|+|||++++++...  ...+.++|+.+++..
T Consensus       242 -------~~~~~~~~~~s~dg~~l~~s~~~--d~~v~v~d~~~~~~~  279 (391)
T 1l0q_A          242 -------VGPDPAGIAVTPDGKKVYVALSF--XNTVSVIDTATNTIT  279 (391)
T ss_dssp             -------CCSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEE
T ss_pred             -------cCCCccEEEEccCCCEEEEEcCC--CCEEEEEECCCCcEE
Confidence                   12245678999999988776533  357888998776543

>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A

Probab=99.22  E-value=3.1e-15  Score=153.83  Aligned_cols=120  Identities=13%  Similarity=0.066  Sum_probs=77.8

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|..+++...          +..|+||++||.+++.   ..|..  ....++ +||.|+++|+||+|.+......   ..
T Consensus        13 ~g~~~~~~~~----------g~~p~vv~lHG~~~~~---~~~~~--~~~~l~-~g~~v~~~D~~G~G~s~~~~~~---~~   73 (304)
T 3b12_A           13 GDVTINCVVG----------GSGPALLLLHGFPQNL---HMWAR--VAPLLA-NEYTVVCADLRGYGGSSKPVGA---PD   73 (304)
Confidence            6666665432          1347899999988763   23332  223344 6999999999998765432100   00


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      .....+.+..+.+..+++.   ++..+++|+||||||.+++.++.++|. +++++|+.+|...
T Consensus        74 ~~~~~~~~~~~~l~~~l~~---l~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~  132 (304)
T 3b12_A           74 HANYSFRAMASDQRELMRT---LGFERFHLVGHARGGRTGHRMALDHPD-SVLSLAVLDIIPT  132 (304)
Confidence            1112344444444444442   334689999999999999999998885 7888888887654

>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}

Probab=99.47  E-value=6.9e-13  Score=135.37  Aligned_cols=122  Identities=11%  Similarity=-0.038  Sum_probs=79.2

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      .+.. +|.++++...        +  ..|.||++||.+++   ...|..  ....++ .+|.|+++|++|+|.+..... 
T Consensus         9 ~~~~-~~~~~~~~~~--------g--~g~~~vllHG~~~~---~~~w~~--~~~~l~-~~~~vi~~Dl~G~G~s~~~~~-   70 (291)
T 3qyj_A            9 IVDT-TEARINLVKA--------G--HGAPLLLLHGYPQT---HVMWHK--IAPLLA-NNFTVVATDLRGYGDSSRPAS-   70 (291)
T ss_dssp             EEEC-SSCEEEEEEE--------C--CSSEEEEECCTTCC---GGGGTT--THHHHT-TTSEEEEECCTTSTTSCCCCC-
T ss_pred             EEec-CCeEEEEEEc--------C--CCCeEEEECCCCCC---HHHHHH--HHHHHh-CCCEEEEEcCCCCCCCCCCCC-
Confidence            3444 7888887653        1  23578899999886   334442  223454 589999999999876543210 


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                        ..........++.+.+..+++.++   ..++.++||||||.+++.++.++|. +++.+++.++.
T Consensus        71 --~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~  130 (291)
T 3qyj_A           71 --VPHHINYSKRVMAQDQVEVMSKLG---YEQFYVVGHDRGARVAHRLALDHPH-RVKKLALLDIA  130 (291)
T ss_dssp             --CGGGGGGSHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCC
T ss_pred             --CccccccCHHHHHHHHHHHHHHcC---CCCEEEEEEChHHHHHHHHHHhCch-hccEEEEECCC
Confidence              000011234444444444444333   4689999999999999999999986 88888877653

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.44  E-value=1.2e-10  Score=132.35  Aligned_cols=336  Identities=13%  Similarity=0.097  Sum_probs=183.0

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEE
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITR   87 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~   87 (790)
                      +...++.|||||++||+.+.  .  .+++.....+.      ....+..+...+..+.|++++..+.--..   .-.+.+
T Consensus        19 g~~~~~~~spdg~~l~~~~~--~--~v~l~~~~~~~------~~~~~~~h~~~v~~~~~spdg~~lasg~~---d~~v~l   85 (611)
T 1nr0_A           19 GTAVVLGNTPAGDKIQYCNG--T--SVYTVPVGSLT------DTEIYTEHSHQTTVAKTSPSGYYCASGDV---HGNVRI   85 (611)
T ss_dssp             TCCCCCEECTTSSEEEEEET--T--EEEEEETTCSS------CCEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEE
T ss_pred             CceeEEeeCCCCCEEEeCCC--C--EEEEecCCCcc------cCeEecCCCCceEEEEECCCCcEEEEEeC---CCCEEE
Confidence            45677889999999999762  3  34445544332      11122233334556678887765533322   234667


Q ss_pred             eeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecccc
Q psy463           88 CSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG  167 (790)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~  167 (790)
                      ++..++.+..........+.+   ...+|||||+.|+........         ...+++++....       ...+...
T Consensus        86 Wd~~~~~~~~~~~~~~~~~~v---~~v~fs~dg~~l~~~~~~~~~---------~~~v~~wd~~~~-------~~~l~gh  146 (611)
T 1nr0_A           86 WDTTQTTHILKTTIPVFSGPV---KDISWDSESKRIAAVGEGRER---------FGHVFLFDTGTS-------NGNLTGQ  146 (611)
T ss_dssp             EESSSTTCCEEEEEECSSSCE---EEEEECTTSCEEEEEECCSSC---------SEEEEETTTCCB-------CBCCCCC
T ss_pred             eECCCCcceeeEeecccCCce---EEEEECCCCCEEEEEECCCCc---------eeEEEEeeCCCC-------cceecCC
Confidence            776554433222222212222   346899999998865532211         236777774221       2223333


Q ss_pred             ceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCC
Q psy463          168 RFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEP  247 (790)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~  247 (790)
                      ...+ .-..|.|++..  .+++...          ...|.+.+..+++.     ...+.                 ....
T Consensus       147 ~~~v-~~v~f~p~~~~--~l~s~s~----------D~~v~lwd~~~~~~-----~~~l~-----------------~H~~  191 (611)
T 1nr0_A          147 ARAM-NSVDFKPSRPF--RIISGSD----------DNTVAIFEGPPFKF-----KSTFG-----------------EHTK  191 (611)
T ss_dssp             SSCE-EEEEECSSSSC--EEEEEET----------TSCEEEEETTTBEE-----EEEEC-----------------CCSS
T ss_pred             CCCc-eEEEECCCCCe--EEEEEeC----------CCeEEEEECCCCeE-----eeeec-----------------cccC
Confidence            3233 33466666542  2222211          13566666655432     11222                 4556


Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCC--CcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLD--RGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~--~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      .+..++|||||++++....+..   |.+.+..++++...+.....  .+.........|||||+.|+ +.+    .++  
T Consensus       192 ~V~~v~fspdg~~las~s~D~~---i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s----~D~--  261 (611)
T 1nr0_A          192 FVHSVRYNPDGSLFASTGGDGT---IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SAS----ADK--  261 (611)
T ss_dssp             CEEEEEECTTSSEEEEEETTSC---EEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEE----TTS--
T ss_pred             ceEEEEECCCCCEEEEEECCCc---EEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE-EEe----CCC--
Confidence            7889999999996666554332   88889888876544421000  01111234789999999887 665    455  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCC---eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR---FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                            .|.++|+.+++     ....+..+.   ..... ..|  +++.++..+.++.     +...+...  ++.....
T Consensus       262 ------~v~lWd~~~~~-----~~~~~~~~~~~~~~~~~-~~~--~~~~l~s~s~d~~-----i~~~~~~~--~~~~~~~  320 (611)
T 1nr0_A          262 ------TIKIWNVATLK-----VEKTIPVGTRIEDQQLG-IIW--TKQALVSISANGF-----INFVNPEL--GSIDQVR  320 (611)
T ss_dssp             ------EEEEEETTTTE-----EEEEEECCSSGGGCEEE-EEE--CSSCEEEEETTCC-----EEEEETTT--TEEEEEE
T ss_pred             ------eEEEEeCCCCc-----eeeeecCCCCccceeEE-EEE--cCCEEEEEeCCCc-----EEEEeCCC--CCcceEE
Confidence                  68889988765     122222111   11112 345  5666666665533     33445544  2211111


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                            .+....+..+.|||||++++.....   ..|.++|+.+++..
T Consensus       321 ------~gh~~~v~~l~~spdg~~l~s~s~D---~~v~~Wd~~~~~~~  359 (611)
T 1nr0_A          321 ------YGHNKAITALSSSADGKTLFSADAE---GHINSWDISTGISN  359 (611)
T ss_dssp             ------CCCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTCCEE
T ss_pred             ------cCCCCCEEEEEEeCCCCEEEEEeCC---CcEEEEECCCCcee
Confidence                  1245678889999999988654332   35888888765443

>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}

Probab=99.43  E-value=2.7e-12  Score=131.89  Aligned_cols=208  Identities=17%  Similarity=0.233  Sum_probs=129.6

Q ss_pred             CceEEEEEEcC-CCcEEEEEEEeCCCCCCCC-CCCccEEEEEcCCCCccccccccccchHHHHHh-----cCCeEEEEEc
Q psy463          468 PSVEYMSVPIQ-PNMEAQVKLFLPPGIDTSG-HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD-----NKDIVVAYID  540 (790)
Q Consensus       468 ~~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~-~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~-----~~G~~v~~~d  540 (790)
                      .+.+.+++.+. -|.+...++++|+++.  + .+++|+|+++||....   ...  ......+..     ..+++||.++
T Consensus        10 ~~v~~~~~~S~~l~~~r~~~VylP~~y~--~~~~~yPVlylldG~~~f---~~~--~~~~~~l~~~~~~~~~~~IvV~i~   82 (331)
T 3gff_A           10 VEYQSKRLESRLLKETREYVIALPEGYA--QSLEAYPVVYLLDGEDQF---DHM--ASLLQFLSQGTMPQIPKVIIVGIH   82 (331)
T ss_dssp             -CEEEEEEEETTTTEEEEEEEECCTTGG--GSCCCEEEEEESSHHHHH---HHH--HHHHHHHTCSSSCSSCCCEEEEEC
T ss_pred             ceEEEEEEEecCCCCeEEEEEEeCCCCC--CCCCCccEEEEecChhhh---HHH--HHHHHHHHhhhhcCCCCEEEEEEC
Confidence            34566677665 3788999999999986  4 6789999999995221   000  111222211     1367888887


Q ss_pred             CCCCCCChhhhHhh-------------hhc-cCCccchhHHH--HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc
Q psy463          541 GRNSALKGNTLKYA-------------GYR-RLGTVEIYDQI--NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL  604 (790)
Q Consensus       541 ~rG~~~~g~~~~~~-------------~~~-~~~~~~~~D~~--~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~  604 (790)
                      ...   ...++...             ... ..+...+.+.+  +.+.++.++++ ++..+ +|+||||||+++++++.+
T Consensus        83 ~~~---R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~-~~~~r-~i~G~S~GG~~al~~~~~  157 (331)
T 3gff_A           83 NTN---RMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLR-TNGIN-VLVGHSFGGLVAMEALRT  157 (331)
T ss_dssp             CSS---HHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSC-EEEEE-EEEEETHHHHHHHHHHHT
T ss_pred             CCC---cccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCC-CCCCe-EEEEECHHHHHHHHHHHh
Confidence            521   11111000             000 01111222222  34455555555 55544 799999999999999999


Q ss_pred             CCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHH
Q psy463          605 DPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAK  684 (790)
Q Consensus       605 ~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~  684 (790)
                      +|+ .|+++++.+|...|..                  ......                                 +..
T Consensus       158 ~p~-~F~~~~~~S~~~w~~~------------------~~~~~~---------------------------------~~~  185 (331)
T 3gff_A          158 DRP-LFSAYLALDTSLWFDS------------------PHYLTL---------------------------------LEE  185 (331)
T ss_dssp             TCS-SCSEEEEESCCTTTTT------------------THHHHH---------------------------------HHH
T ss_pred             Cch-hhheeeEeCchhcCCh------------------HHHHHH---------------------------------HHH
Confidence            985 9999999999754321                  000000                                 000


Q ss_pred             HHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCc-------ccchhhhHHHHHHHHhc---
Q psy463          685 SLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDD-------NVHFQQSMMLAKSLQHA---  754 (790)
Q Consensus       685 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~-------~v~~~~~~~l~~~l~~~---  754 (790)
                      .+                               ...... ..|+++.||+.|.       .++.+.+.++++.|+..   
T Consensus       186 ~~-------------------------------~~~~~~-~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~  233 (331)
T 3gff_A          186 RV-------------------------------VKGDFK-QKQLFMAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPK  233 (331)
T ss_dssp             HH-------------------------------HHCCCS-SEEEEEEECCCSEETTTEECCHHHHHHHHHHHHHHHHCCT
T ss_pred             Hh-------------------------------hcccCC-CCeEEEEeCCCCCCCccchHHHHHHHHHHHHHHHHhccCC
Confidence            00                               001112 6899999999998       57888899999999987   


Q ss_pred             CCceEEEEcCCCCCcCC
Q psy463          755 DIMFQSQTYPDEEHGLI  771 (790)
Q Consensus       755 g~~~~~~~~p~~~H~~~  771 (790)
                      |+++++.+||+++|+..
T Consensus       234 g~~~~~~~~pg~~H~sv  250 (331)
T 3gff_A          234 GLGFMAKYYPEETHQSV  250 (331)
T ss_dssp             TEEEEEEECTTCCTTTH
T ss_pred             CceEEEEECCCCCcccc
Confidence            77899999999999764

>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*

Probab=99.42  E-value=2.9e-13  Score=137.46  Aligned_cols=91  Identities=10%  Similarity=-0.061  Sum_probs=61.7

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .|.||++||.++..   ..|.  .....++ .||.|+++|+||+|.+...        .....+.+..+.+..+++... 
T Consensus        51 ~~~lvllHG~~~~~---~~~~--~l~~~L~-~~~~v~~~D~~G~G~S~~~--------~~~~~~~~~a~~~~~~l~~~~-  115 (280)
T 3qmv_A           51 PLRLVCFPYAGGTV---SAFR--GWQERLG-DEVAVVPVQLPGRGLRLRE--------RPYDTMEPLAEAVADALEEHR-  115 (280)
T ss_dssp             SEEEEEECCTTCCG---GGGT--THHHHHC-TTEEEEECCCTTSGGGTTS--------CCCCSHHHHHHHHHHHHHHTT-
T ss_pred             CceEEEECCCCCCh---HHHH--HHHHhcC-CCceEEEEeCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHhC-
Confidence            48899999988763   3333  2334455 3999999999997654221        112345555555555444331 


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCCC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDPS  607 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~  607 (790)
                       ...++.|+||||||.+++.++.++|.
T Consensus       116 -~~~~~~lvG~S~Gg~va~~~a~~~p~  141 (280)
T 3qmv_A          116 -LTHDYALFGHSMGALLAYEVACVLRR  141 (280)
T ss_dssp             -CSSSEEEEEETHHHHHHHHHHHHHHH
T ss_pred             -CCCCEEEEEeCHhHHHHHHHHHHHHH
Confidence             34789999999999999999998764

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.41  E-value=6.4e-11  Score=124.25  Aligned_cols=172  Identities=11%  Similarity=0.101  Sum_probs=94.0

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECC-CCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSIN-EGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~-~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      ....+.|||||+ ++.++...+  .|++++++ +|+...+.......+.  ....++|||||+.+++...    ..+   
T Consensus       142 ~~~~~~~spdg~-l~v~~~~~~--~v~~~~~~~~g~~~~~~~~~~~~g~--~p~~~~~spdg~~l~v~~~----~~~---  209 (347)
T 3hfq_A          142 HIHYTDLTPDNR-LAVIDLGSD--KVYVYNVSDAGQLSEQSVLTMEAGF--GPRHLVFSPDGQYAFLAGE----LSS---  209 (347)
T ss_dssp             CEEEEEECTTSC-EEEEETTTT--EEEEEEECTTSCEEEEEEEECCTTC--CEEEEEECTTSSEEEEEET----TTT---
T ss_pred             CceEEEECCCCc-EEEEeCCCC--EEEEEEECCCCcEEEeeeEEcCCCC--CCceEEECCCCCEEEEEeC----CCC---
Confidence            356789999999 555555433  37777776 5665544332211110  0225799999998874333    334   


Q ss_pred             cCcccEEEEEEcC--CCCcccCCCcccc------cCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCC
Q psy463          327 VDSWDHLTFIDLD--DQAGIKDKVPVPL------TRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPT  395 (790)
Q Consensus       327 ~~~~~~l~~~d~~--~~~~~~~~~~~~l------t~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~  395 (790)
                           .+.+++++  +++      ...+      ..+   ..... .++|+|||++||+.....    ..|.+++++.. 
T Consensus       210 -----~v~v~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~-~i~~spdG~~l~v~~~~~----~~v~v~~~~~~-  272 (347)
T 3hfq_A          210 -----QIASLKYDTQTGA------FTQLGIVKTIPADYTAHNGAA-AIRLSHDGHFLYVSNRGY----NTLAVFAVTAD-  272 (347)
T ss_dssp             -----EEEEEEEETTTTE------EEEEEEEESSCTTCCSCCEEE-EEEECTTSCEEEEEEETT----TEEEEEEECGG-
T ss_pred             -----EEEEEEecCCCCc------eEEeeeeeecCCCCCCCCcce-eEEECCCCCEEEEEeCCC----CEEEEEEECCC-
Confidence                 45555554  343      2211      111   01223 378999999988876542    23444444321 


Q ss_pred             CCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463          396 ATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       396 ~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                      ++.+.+...    .........+.|||||++++......+.-.+|.++.++++++.+
T Consensus       273 g~~~~~~~~----~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~  325 (347)
T 3hfq_A          273 GHLTLIQQI----STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLL  325 (347)
T ss_dssp             GCEEEEEEE----ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred             CcEEEeEEE----ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEec
Confidence            233333221    01122345789999999887765444433344447666666544

>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}

Probab=99.41  E-value=1.1e-12  Score=138.82  Aligned_cols=120  Identities=15%  Similarity=0.007  Sum_probs=87.4

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcC---------CeEEEEEcCCCCCCChh
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNK---------DIVVAYIDGRNSALKGN  549 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~---------G~~v~~~d~rG~~~~g~  549 (790)
                      +|.++++....+.+      ...|.||++||.+++.   ..|.  .....+++.         ||.|+++|++|+|.+..
T Consensus        76 ~g~~i~~~~~~~~~------~~~~plll~HG~~~s~---~~~~--~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~  144 (388)
T 4i19_A           76 DGATIHFLHVRSPE------PDATPMVITHGWPGTP---VEFL--DIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGP  144 (388)
T ss_dssp             TTEEEEEEEECCSS------TTCEEEEEECCTTCCG---GGGH--HHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCC
T ss_pred             CCeEEEEEEccCCC------CCCCeEEEECCCCCCH---HHHH--HHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCC
Confidence            89999988876642      2346799999999873   2333  222344433         99999999999776443


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      ...       ....+.++.+.+..++++++   .++++++||||||.+++.++.++|+ .++++++.+|..
T Consensus       145 ~~~-------~~~~~~~~a~~~~~l~~~lg---~~~~~l~G~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~  204 (388)
T 4i19_A          145 LKS-------AGWELGRIAMAWSKLMASLG---YERYIAQGGDIGAFTSLLLGAIDPS-HLAGIHVNLLQT  204 (388)
T ss_dssp             CSS-------CCCCHHHHHHHHHHHHHHTT---CSSEEEEESTHHHHHHHHHHHHCGG-GEEEEEESSCCC
T ss_pred             CCC-------CCCCHHHHHHHHHHHHHHcC---CCcEEEEeccHHHHHHHHHHHhChh-hceEEEEecCCC
Confidence            210       12456777777777766444   4689999999999999999999985 899999888754

>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}

Probab=99.40  E-value=3.9e-11  Score=120.65  Aligned_cols=115  Identities=19%  Similarity=0.265  Sum_probs=85.4

Q ss_pred             EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcC--------CCCCCChhhhHh
Q psy463          482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDG--------RNSALKGNTLKY  553 (790)
Q Consensus       482 ~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~--------rG~~~~g~~~~~  553 (790)
                      .+...+++|.+    ..++.|+||.+||+...                ..+||+++.+++        +|+.++|. |.+
T Consensus        91 ~~~~~i~lP~~----~~~p~Pvii~i~~~~~~----------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~  149 (375)
T 3pic_A           91 SFTVTITYPSS----GTAPYPAIIGYGGGSLP----------------APAGVAMINFNNDNIAAQVNTGSRGQGK-FYD  149 (375)
T ss_dssp             EEEEEEECCSS----SCSSEEEEEEETTCSSC----------------CCTTCEEEEECHHHHSCCSSGGGTTCSH-HHH
T ss_pred             EEEEEEECCCC----CCCCccEEEEECCCccc----------------cCCCeEEEEecccccccccCCCCcccee-ccc
Confidence            57788999975    35788999999884211                127999999986        44444554 321


Q ss_pred             --hhhccCCccc--hhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          554 --AGYRRLGTVE--IYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       554 --~~~~~~~~~~--~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                        ....++|...  +-++..++++|.+ .+  .+|.+||+|+|||+||..++++++.++  +++++|..++..
T Consensus       150 ly~~~~~~gal~awaWg~~raid~L~~-~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~--Ri~~~v~~~~g~  219 (375)
T 3pic_A          150 LYGSSHSAGAMTAWAWGVSRVIDALEL-VPGARIDTTKIGVTGCSRNGKGAMVAGAFEK--RIVLTLPQESGA  219 (375)
T ss_dssp             HHCTTCSCCHHHHHHHHHHHHHHHHHH-CGGGCEEEEEEEEEEETHHHHHHHHHHHHCT--TEEEEEEESCCT
T ss_pred             ccCCccchHHHHHHHHHHHHHHHHHHh-CCccCcChhhEEEEEeCCccHHHHHHHhcCC--ceEEEEeccCCC
Confidence              1123344433  3488899999998 77  899999999999999999999999875  899999988643

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.40  E-value=1.7e-10  Score=119.95  Aligned_cols=283  Identities=10%  Similarity=0.065  Sum_probs=156.2

Q ss_pred             EEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCc-ce
Q psy463           84 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV-PV  162 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~-~~  162 (790)
                      .+.+++..+++.........     ... ..+|+|||+.++.......            .|+++++++++     . ..
T Consensus        21 ~v~~~d~~~~~~~~~~~~~~-----~~~-~~~~s~dg~~l~~~~~~~~------------~i~~~d~~~~~-----~~~~   77 (331)
T 3u4y_A           21 RISFFSTDTLEILNQITLGY-----DFV-DTAITSDCSNVVVTSDFCQ------------TLVQIETQLEP-----PKVV   77 (331)
T ss_dssp             EEEEEETTTCCEEEEEECCC-----CEE-EEEECSSSCEEEEEESTTC------------EEEEEECSSSS-----CEEE
T ss_pred             eEEEEeCcccceeeeEEccC-----Ccc-eEEEcCCCCEEEEEeCCCC------------eEEEEECCCCc-----eeEE
Confidence            45667777776655443221     112 5689999998887664332            89999998874     2 33


Q ss_pred             eccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCC
Q psy463          163 PLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE  242 (790)
Q Consensus       163 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~  242 (790)
                      .++.+... ..-..++++++  .+|.... ..       ....|+++|+++++...     .+.                
T Consensus        78 ~~~~~~~~-~~~~~~s~dg~--~l~~~~~-~~-------~~~~i~v~d~~~~~~~~-----~~~----------------  125 (331)
T 3u4y_A           78 AIQEGQSS-MADVDITPDDQ--FAVTVTG-LN-------HPFNMQSYSFLKNKFIS-----TIP----------------  125 (331)
T ss_dssp             EEEECSSC-CCCEEECTTSS--EEEECCC-SS-------SSCEEEEEETTTTEEEE-----EEE----------------
T ss_pred             ecccCCCC-ccceEECCCCC--EEEEecC-CC-------CcccEEEEECCCCCeEE-----EEE----------------
Confidence            33333221 11135677665  4443321 10       01289999998876311     111                


Q ss_pred             CCCCCEEEEEEEccCCcEEEEEeccCcc-eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          243 NNVEPVLSRVNWANESVVAAWVNRVQNR-ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       243 ~~~~~~~~~~~wspDg~~~~~~~r~~~~-~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                        .......+.|+|||+.++.+....+. ..+|.++.. +............+  .....+.|||||+.+++...    .
T Consensus       126 --~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~-g~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~----~  196 (331)
T 3u4y_A          126 --IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD-GVLFDTGQEFISGG--TRPFNITFTPDGNFAFVANL----I  196 (331)
T ss_dssp             --CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT-CCEEEEEEEEECSS--SSEEEEEECTTSSEEEEEET----T
T ss_pred             --CCCCccceEECCCCCEEEEEecCCCceEEEEEECCC-CcEeecCCccccCC--CCccceEECCCCCEEEEEeC----C
Confidence              12224689999999966666554444 445555422 32221111100000  01246899999998875433    3


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                      ++        .|.++|+++++...  ....+..+ ..... ++|+|||++||+.... .   ..|+++++.+  ++.+.+
T Consensus       197 ~~--------~v~v~d~~~~~~~~--~~~~~~~~-~~~~~-~~~spdg~~l~v~~~~-~---~~i~~~d~~~--~~~~~~  258 (331)
T 3u4y_A          197 GN--------SIGILETQNPENIT--LLNAVGTN-NLPGT-IVVSRDGSTVYVLTES-T---VDVFNFNQLS--GTLSFV  258 (331)
T ss_dssp             TT--------EEEEEECSSTTSCE--EEEEEECS-SCCCC-EEECTTSSEEEEECSS-E---EEEEEEETTT--TEEEEE
T ss_pred             CC--------eEEEEECCCCcccc--eeeeccCC-CCCce-EEECCCCCEEEEEEcC-C---CEEEEEECCC--Cceeee
Confidence            33        79999998776100  02223322 22223 7899999988776543 2   5688899876  554333


Q ss_pred             eecccc---cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          402 TCDLLT---SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       402 t~~~~~---~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                      ......   ..........+.|||||++++++...  ...+.++++.++...
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~--~~~v~v~d~~~~~~~  308 (331)
T 3u4y_A          259 KSFGHGLLIDPRPLFGANQMALNKTETKLFISANI--SRELKVFTISGKVVG  308 (331)
T ss_dssp             EEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT--TTEEEEEETTSCEEE
T ss_pred             cccccccccCCCCcccccceEECCCCCEEEEecCC--CCcEEEEEecCCccc
Confidence            221000   00011122447999999998776433  346888888765544

>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P

Probab=99.39  E-value=1.5e-11  Score=127.21  Aligned_cols=105  Identities=14%  Similarity=0.077  Sum_probs=65.2

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhc-CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADN-KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      .|+||++||++++   ...|.. +. ..+++ .+|.|+++|+||+|.+...-.       ....++++.+.+..+++.+.
T Consensus        38 ~p~lvllHG~~~~---~~~w~~-~~-~~L~~~~~~~via~Dl~GhG~S~~~~~-------~~~~~~~~a~dl~~~l~~l~  105 (316)
T 3c5v_A           38 GPVLLLLHGGGHS---ALSWAV-FT-AAIISRVQCRIVALDLRSHGETKVKNP-------EDLSAETMAKDVGNVVEAMY  105 (316)
T ss_dssp             SCEEEEECCTTCC---GGGGHH-HH-HHHHTTBCCEEEEECCTTSTTCBCSCT-------TCCCHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCcc---cccHHH-HH-HHHhhcCCeEEEEecCCCCCCCCCCCc-------cccCHHHHHHHHHHHHHHHh
Confidence            3789999998765   233432 22 33442 289999999999887543200       01233333333333333220


Q ss_pred             CcCC-CceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCC
Q psy463          580 YIDK-TRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPV  619 (790)
Q Consensus       580 ~~d~-~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~  619 (790)
                       .+. .++.|+||||||.+++.+|.++ .++ ++.+|+.++.
T Consensus       106 -~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~  145 (316)
T 3c5v_A          106 -GDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV  145 (316)
T ss_dssp             -TTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred             -ccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence             012 6899999999999999999863 223 8888887654

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.38  E-value=9e-10  Score=113.93  Aligned_cols=144  Identities=16%  Similarity=0.169  Sum_probs=94.0

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      .+..++|+|||++++....+.   .|.++|+.++++...+...  .   .......|+|||+.|+ +.+    .+|    
T Consensus       166 ~v~~~~~spdg~~lasg~~dg---~i~iwd~~~~~~~~~~~~h--~---~~v~~l~~spd~~~l~-s~s----~dg----  228 (321)
T 3ow8_A          166 FILSIAYSPDGKYLASGAIDG---IINIFDIATGKLLHTLEGH--A---MPIRSLTFSPDSQLLV-TAS----DDG----  228 (321)
T ss_dssp             CEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEEECCC--S---SCCCEEEECTTSCEEE-EEC----TTS----
T ss_pred             eEEEEEECCCCCEEEEEcCCC---eEEEEECCCCcEEEEEccc--C---CceeEEEEcCCCCEEE-EEc----CCC----
Confidence            356789999999666554433   2889999988765443211  1   1245789999999777 565    455    


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLT  407 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~  407 (790)
                          .|.++|+.+++     ....+......+.. ++|+||++.|+..+.++     .|...++..  ++  ++..    
T Consensus       229 ----~i~iwd~~~~~-----~~~~~~~h~~~v~~-~~~sp~~~~l~s~s~D~-----~v~iwd~~~--~~--~~~~----  285 (321)
T 3ow8_A          229 ----YIKIYDVQHAN-----LAGTLSGHASWVLN-VAFCPDDTHFVSSSSDK-----SVKVWDVGT--RT--CVHT----  285 (321)
T ss_dssp             ----CEEEEETTTCC-----EEEEECCCSSCEEE-EEECTTSSEEEEEETTS-----CEEEEETTT--TE--EEEE----
T ss_pred             ----eEEEEECCCcc-----eeEEEcCCCCceEE-EEECCCCCEEEEEeCCC-----cEEEEeCCC--CE--EEEE----
Confidence                58889988765     23345544444554 88999999887776664     344445544  22  2221    


Q ss_pred             cCCCcccEEEEEEecCCcEEEEEe
Q psy463          408 SANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      ..+....+..+.|+|++++|+...
T Consensus       286 ~~~h~~~v~~v~~s~~g~~l~s~~  309 (321)
T 3ow8_A          286 FFDHQDQVWGVKYNGNGSKIVSVG  309 (321)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EcCCCCcEEEEEECCCCCEEEEEe
Confidence            111456788899999999886543

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.38  E-value=3.2e-10  Score=118.00  Aligned_cols=282  Identities=11%  Similarity=0.046  Sum_probs=164.0

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCcccc--CCCCccccccCCCcceeEeeeecccceeEE
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAIN--LREPVLSRVNWANESVVAAWVNRVQNRARI   85 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~   85 (790)
                      +...++.|||||+.||..+  ++...+|.+...+..     .......  .+......+.|++++..+.-....   -.+
T Consensus        52 ~~v~~~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i  121 (337)
T 1gxr_A           52 EVVCAVTISNPTRHVYTGG--KGCVKVWDISHPGNK-----SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---STL  121 (337)
T ss_dssp             SCCCEEEECSSSSEEEEEC--BSEEEEEETTSTTCC-----SCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---SEE
T ss_pred             CceEEEEEecCCcEEEEcC--CCeEEEEECCCCCce-----eeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---CcE
Confidence            3457889999999999876  677777776653321     0110111  122334456777776644333222   246


Q ss_pred             EEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecc
Q psy463           86 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  165 (790)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt  165 (790)
                      .+++..+++.............   .....|+|||+.|+..+. +            +.|.++++.+++     ....+.
T Consensus       122 ~~~d~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~l~~~~~-d------------g~v~~~d~~~~~-----~~~~~~  180 (337)
T 1gxr_A          122 SIWDLAAPTPRIKAELTSSAPA---CYALAISPDSKVCFSCCS-D------------GNIAVWDLHNQT-----LVRQFQ  180 (337)
T ss_dssp             EEEECCCC--EEEEEEECSSSC---EEEEEECTTSSEEEEEET-T------------SCEEEEETTTTE-----EEEEEC
T ss_pred             EEEECCCCCcceeeecccCCCc---eEEEEECCCCCEEEEEeC-C------------CcEEEEeCCCCc-----eeeeee
Confidence            6677766653333222221111   124589999998776442 1            268889987763     223333


Q ss_pred             ccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCC
Q psy463          166 RGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNV  245 (790)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~  245 (790)
                      .....+ .-+.|+++++  .++...           ....|+++|+.+++.      ....                 ..
T Consensus       181 ~~~~~i-~~~~~~~~~~--~l~~~~-----------~dg~i~~~d~~~~~~------~~~~-----------------~~  223 (337)
T 1gxr_A          181 GHTDGA-SCIDISNDGT--KLWTGG-----------LDNTVRSWDLREGRQ------LQQH-----------------DF  223 (337)
T ss_dssp             CCSSCE-EEEEECTTSS--EEEEEE-----------TTSEEEEEETTTTEE------EEEE-----------------EC
T ss_pred             cccCce-EEEEECCCCC--EEEEEe-----------cCCcEEEEECCCCce------Eeee-----------------cC
Confidence            322223 2346666554  333322           125788889887652      1111                 23


Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...+..+.|+|||+.++......   .|.++++.+++...+....      .......|+|||+.|+ +.+    .+|  
T Consensus       224 ~~~v~~~~~s~~~~~l~~~~~~~---~i~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~-~~~----~dg--  287 (337)
T 1gxr_A          224 TSQIFSLGYCPTGEWLAVGMESS---NVEVLHVNKPDKYQLHLHE------SCVLSLKFAYCGKWFV-STG----KDN--  287 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTS---CEEEEETTSSCEEEECCCS------SCEEEEEECTTSSEEE-EEE----TTS--
T ss_pred             CCceEEEEECCCCCEEEEEcCCC---cEEEEECCCCCeEEEcCCc------cceeEEEECCCCCEEE-Eec----CCC--
Confidence            44577899999999655554332   2899999888765443221      1244789999999877 454    455  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~  389 (790)
                            .|.++++.+++      ..........+.. +.|+||++.|+..+.++.   ..+|.+
T Consensus       288 ------~i~~~~~~~~~------~~~~~~~~~~v~~-~~~s~~~~~l~~~~~dg~---i~iw~~  335 (337)
T 1gxr_A          288 ------LLNAWRTPYGA------SIFQSKESSSVLS-CDISVDDKYIVTGSGDKK---ATVYEV  335 (337)
T ss_dssp             ------EEEEEETTTCC------EEEEEECSSCEEE-EEECTTSCEEEEEETTSC---EEEEEE
T ss_pred             ------cEEEEECCCCe------EEEEecCCCcEEE-EEECCCCCEEEEecCCCe---EEEEEE
Confidence                  68999998876      3332223333444 789999998887776654   566654

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.38  E-value=3.8e-11  Score=138.29  Aligned_cols=267  Identities=13%  Similarity=0.184  Sum_probs=163.2

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCc--ceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV--PVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      +..+++|.++||........        ..-+|+.+.+.+.   +.+  ...+..+......-..|+|+++. +.|....
T Consensus        82 ~~p~~~g~~~y~~~~~~~~~--------~~~~~r~~~~~~~---~vllD~n~la~~~~~~l~~~~~SpDg~~-lAy~~~~  149 (693)
T 3iuj_A           82 GAPFREGRYHYFFKNDGLQN--------QNVLWRQQEGKPA---EVFLDPNTLSPDGTTALDQLSFSRDGRI-LAYSLSL  149 (693)
T ss_dssp             CCCEEETTEEEEEEECSSCS--------SCEEEEECTTSCC---EEEECGGGGSTTSCCEEEEEEECTTSSE-EEEEEEC
T ss_pred             CCCEEECCEEEEEEEcCCCc--------eeEEEEeCCCCCc---EEEEehhhccCCCcEEEEEEEECCCCCE-EEEEEec
Confidence            45578898888765433211        2245664433221   001  12233332223333578888775 5565543


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEecc----
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRV----  267 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~----  267 (790)
                      .+.       ....|+++|+++|+..      ..+                 ........++|| ||+.++++...    
T Consensus       150 ~G~-------~~~~i~v~dl~tg~~~------~~~-----------------~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~  198 (693)
T 3iuj_A          150 AGS-------DWREIHLMDVESKQPL------ETP-----------------LKDVKFSGISWL-GNEGFFYSSYDKPDG  198 (693)
T ss_dssp             SSC-------CEEEEEEEETTTCSEE------EEE-----------------EEEEESCCCEEE-TTTEEEEEESSCCC-
T ss_pred             CCC-------ceEEEEEEECCCCCCC------ccc-----------------cCCceeccEEEe-CCCEEEEEEecCccc
Confidence            222       2268999999998732      211                 001112468999 99955555433    


Q ss_pred             ------CcceEEEEEECCCCce--eEEEEEeC-CCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEc
Q psy463          268 ------QNRARITRCSINEGTC--DVVFSRDL-DRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL  338 (790)
Q Consensus       268 ------~~~~~i~~~~~~~g~~--~~l~~~~~-~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~  338 (790)
                            ....+|++.++.++..  +.++.... ...|   ...+.|||||++|++...    ..+.     ..+||++|+
T Consensus       199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~---~~~~~~SpDg~~l~~~~~----~~~~-----~~~i~~~d~  266 (693)
T 3iuj_A          199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR---YVGATVTEDDRFLLISAA----NSTS-----GNRLYVKDL  266 (693)
T ss_dssp             ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCS---EEEEEECTTSCEEEEEEE----SSSS-----CCEEEEEET
T ss_pred             ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeE---EEEEEEcCCCCEEEEEEc----cCCC-----CcEEEEEEC
Confidence                  2245799999987654  44554332 1122   236889999999987655    2231     358999999


Q ss_pred             CCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc---ceeeecccccCCCcccE
Q psy463          339 DDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP---ECITCDLLTSANQKCSY  415 (790)
Q Consensus       339 ~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~---~~lt~~~~~~~~~~~~~  415 (790)
                      ++++.    ..+.|+........ + |+++|+.|||.++.+.+ ..+|+.+++++  +..   +.++..      .. ..
T Consensus       267 ~~~~~----~~~~l~~~~~~~~~-~-~~~~g~~l~~~t~~~~~-~~~l~~~d~~~--~~~~~~~~l~~~------~~-~~  330 (693)
T 3iuj_A          267 SQENA----PLLTVQGDLDADVS-L-VDNKGSTLYLLTNRDAP-NRRLVTVDAAN--PGPAHWRDLIPE------RQ-QV  330 (693)
T ss_dssp             TSTTC----CCEEEECSSSSCEE-E-EEEETTEEEEEECTTCT-TCEEEEEETTS--CCGGGCEEEECC------CS-SC
T ss_pred             CCCCC----ceEEEeCCCCceEE-E-EeccCCEEEEEECCCCC-CCEEEEEeCCC--CCccccEEEecC------CC-CE
Confidence            76520    15667655433332 3 88999999999987432 36899999987  443   445542      22 22


Q ss_pred             EEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEec
Q psy463          416 SGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWD  453 (790)
Q Consensus       416 ~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  453 (790)
                      .  .||+++++|++.....+.+.|++++++++..+.+.
T Consensus       331 ~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~  366 (693)
T 3iuj_A          331 L--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVA  366 (693)
T ss_dssp             E--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEC
T ss_pred             E--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEee
Confidence            2  89999999999988777889999999887766654

>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*

Probab=99.37  E-value=1.2e-11  Score=124.67  Aligned_cols=249  Identities=16%  Similarity=0.198  Sum_probs=140.1

Q ss_pred             EEEEEEcC-CCcEEEEEEEeCCCCCC---CCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcCC--C
Q psy463          471 EYMSVPIQ-PNMEAQVKLFLPPGIDT---SGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDGR--N  543 (790)
Q Consensus       471 ~~~~~~~~-dg~~i~~~~~~P~~~~~---~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~r--G  543 (790)
                      ..+++.+. -|.+....+|+|+++..   ...+++|+|+++||.+++.   ..|.. .-...+++..+.++++++..  +
T Consensus        15 ~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~---~~w~~~~~~~~~~~~~~~~~v~p~~~p~~   91 (299)
T 4fol_A           15 IKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTP---DNASEKAFWQFQADKYGFAIVFPDTSPRG   91 (299)
T ss_dssp             EEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCH---HHHHHHSCHHHHHHHHTCEEEEECSSCCS
T ss_pred             EEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCCh---HHHHHhchHhHHHHHcCchhhccCCCcce
Confidence            34455543 47889999999988641   1246799999999998762   33321 22345566678999998842  1


Q ss_pred             CCC-------C--h--hhh-HhhhhccC-CccchhHHH--HHHHHHHHhCC------CcCCCceEEEEechHHHHHHHHH
Q psy463          544 SAL-------K--G--NTL-KYAGYRRL-GTVEIYDQI--NVTRYLQENLP------YIDKTRTAIWGWSYGGYATGLAL  602 (790)
Q Consensus       544 ~~~-------~--g--~~~-~~~~~~~~-~~~~~~D~~--~~~~~l~~~~~------~~d~~ri~i~G~S~GG~~a~~~a  602 (790)
                      ...       +  |  ..+ .+.....+ +...+++.+  +.+.++.++++      ..++++.+|.|+||||+-|+.++
T Consensus        92 ~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~a  171 (299)
T 4fol_A           92 DEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGY  171 (299)
T ss_dssp             TTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHH
T ss_pred             eecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHH
Confidence            100       0  0  000 00000000 001122211  23334433333      12457899999999999999999


Q ss_pred             hcCC-CCceEEEEEeCCCCCcccccccc--hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhH
Q psy463          603 ALDP-SNVFKCGISVAPVTDWIYYDTIY--SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQS  679 (790)
Q Consensus       603 ~~~p-~~~~~~~v~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~  679 (790)
                      .++| ...++++.+.+|..+........  ...+++..     ...+.                                
T Consensus       172 l~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~-----~~~~~--------------------------------  214 (299)
T 4fol_A          172 LKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEE-----KAQWE--------------------------------  214 (299)
T ss_dssp             HHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC----------CG--------------------------------
T ss_pred             HhCCCCCceEEEEecccccCcccccccccccccccccc-----hhhhh--------------------------------
Confidence            9864 24788999999887643211000  00111111     00000                                


Q ss_pred             HHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchh-hhHHHHHHHHhcCCc-
Q psy463          680 MMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIM-  757 (790)
Q Consensus       680 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~-  757 (790)
                                                    .+....++....+....++++-.|+.|.....+ ..+.|.++++++|.+ 
T Consensus       215 ------------------------------~~d~~~l~~~~~~~~~~~i~id~G~~D~f~~~~l~~~~f~~a~~~~g~~~  264 (299)
T 4fol_A          215 ------------------------------AYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQD  264 (299)
T ss_dssp             ------------------------------GGCHHHHGGGSCCCTTCCEEEEEETTCTTHHHHTCTHHHHHHHTTSTTTT
T ss_pred             ------------------------------hcCHHHHHHhcccCCCCceEEEecCCCcchhhhcCHHHHHHHHHhcCCCc
Confidence                                          011111112222222467999999999876543 346799999998876 


Q ss_pred             -eEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          758 -FQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       758 -~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                       +++...||-+|... ....+++..++|..++|.
T Consensus       265 ~~~~r~~~GydHsy~-f~~~fi~dhl~fha~~Lg  297 (299)
T 4fol_A          265 YVEIKKVHGFDHSYY-FVSTFVPEHAEFHARNLG  297 (299)
T ss_dssp             CEEEEEETTCCSSHH-HHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEeCCCCCCCHH-HHHHHHHHHHHHHHHhcC
Confidence             68888898889654 355666777788777763

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.37  E-value=1.4e-10  Score=121.99  Aligned_cols=292  Identities=15%  Similarity=0.089  Sum_probs=155.4

Q ss_pred             CceeEeCCCCCceEEEEecCC---ceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEE
Q psy463           10 SSALWFSPSGNNLAYASFDDN---RTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARIT   86 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~   86 (790)
                      ..+++|||||++||-.+.+..   ...++++....+....  ........+...+..+.|++++..+.-..+    -.+.
T Consensus        45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~--~~~~~~~~~~~~V~~~~~s~d~~~l~~s~d----g~v~  118 (357)
T 4g56_B           45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE--SLCTAGVQTEAGVTDVAWVSEKGILVASDS----GAVE  118 (357)
T ss_dssp             EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CG--GGCSEEEECSSCEEEEEEETTTEEEEEETT----SCEE
T ss_pred             EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcce--eEecccCCCCCCEEEEEEcCCCCEEEEECC----CEEE
Confidence            357889999999998876432   2345555554442110  000011112223455678877665432211    2366


Q ss_pred             EeeCCCCeeeEEEeec--CCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceec
Q psy463           87 RCSINEGTCDVVFSRD--LDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  164 (790)
Q Consensus        87 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~l  164 (790)
                      +++..++++..+....  .....+   ....|+|||+.|+-.+ .+            +.|.++++.+++     ....+
T Consensus       119 lWd~~~~~~~~~~~~~~~~h~~~V---~~v~~spdg~~l~sgs-~d------------g~v~iwd~~~~~-----~~~~~  177 (357)
T 4g56_B          119 LWEILEKESLLVNKFAKYEHDDIV---KTLSVFSDGTQAVSGG-KD------------FSVKVWDLSQKA-----VLKSY  177 (357)
T ss_dssp             EC--------CCCCEEECCCSSCE---EEEEECSSSSEEEEEE-TT------------SCEEEEETTTTE-----EEEEE
T ss_pred             EeeccccceeEEEeeccCCCCCCE---EEEEECCCCCEEEEEe-CC------------CeEEEEECCCCc-----EEEEE
Confidence            7777666544322211  111111   2358999999877433 22            268888887763     23333


Q ss_pred             cccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCC
Q psy463          165 TRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENN  244 (790)
Q Consensus       165 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~  244 (790)
                      ......+.. ..+.++++..++..+            ....|.+.|+.+++....   ....                 .
T Consensus       178 ~~h~~~v~~-v~~s~~~~~~~~s~~------------~dg~v~~wd~~~~~~~~~---~~~~-----------------~  224 (357)
T 4g56_B          178 NAHSSEVNC-VAACPGKDTIFLSCG------------EDGRILLWDTRKPKPATR---IDFC-----------------A  224 (357)
T ss_dssp             CCCSSCEEE-EEECTTCSSCEEEEE------------TTSCEEECCTTSSSCBCB---CCCT-----------------T
T ss_pred             cCCCCCEEE-EEEccCCCceeeeec------------cCCceEEEECCCCceeee---eeec-----------------c
Confidence            333333332 355555443222211            114677778877653111   1111                 3


Q ss_pred             CCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          245 VEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       245 ~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ....+..+.|+||+. +++....+.   .|.++|+.++++...+...  ..   .....+|||||+.++.+.+    .+|
T Consensus       225 ~~~~v~~v~~sp~~~~~la~g~~d~---~i~~wd~~~~~~~~~~~~~--~~---~v~~l~~sp~~~~~lasgs----~D~  292 (357)
T 4g56_B          225 SDTIPTSVTWHPEKDDTFACGDETG---NVSLVNIKNPDSAQTSAVH--SQ---NITGLAYSYHSSPFLASIS----EDC  292 (357)
T ss_dssp             CCSCEEEEEECTTSTTEEEEEESSS---CEEEEESSCGGGCEEECCC--SS---CEEEEEECSSSSCCEEEEE----TTS
T ss_pred             ccccccchhhhhcccceEEEeeccc---ceeEEECCCCcEeEEEecc--ce---eEEEEEEcCCCCCEEEEEe----CCC
Confidence            345678899999976 665544332   2889999888765544321  11   1347899999976554665    456


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeec-CCCEEEEEEcCCCCceEEEEEEEc
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE-KENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                              .|.++|+++++      ......+...+.. ++|+| |++.|+-.+.++.   ..+|.++.
T Consensus       293 --------~i~iwd~~~~~------~~~~~~H~~~V~~-vafsP~d~~~l~s~s~Dg~---v~iW~~~~  343 (357)
T 4g56_B          293 --------TVAVLDADFSE------VFRDLSHRDFVTG-VAWSPLDHSKFTTVGWDHK---VLHHHLPS  343 (357)
T ss_dssp             --------CEEEECTTSCE------EEEECCCSSCEEE-EEECSSSTTEEEEEETTSC---EEEEECC-
T ss_pred             --------EEEEEECCCCc------EeEECCCCCCEEE-EEEeCCCCCEEEEEcCCCe---EEEEECCC
Confidence                    58899998887      4443344445555 89998 7887766665543   55665543

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.36  E-value=3.3e-10  Score=119.47  Aligned_cols=176  Identities=14%  Similarity=0.079  Sum_probs=99.8

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCC----c-eeEE---EEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEG----T-CDVV---FSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ  319 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g----~-~~~l---~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~  319 (790)
                      ....+.|||||+.++.++...+...+|.++..++    + ....   .......+.  ....+.|||||+.+++ ..   
T Consensus       156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~v-~~---  229 (361)
T 3scy_A          156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS--GPRHLIFNSDGKFAYL-IN---  229 (361)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC--CEEEEEECTTSSEEEE-EE---
T ss_pred             cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC--CCeEEEEcCCCCEEEE-Ec---
Confidence            3467999999997777766555544555555454    2 2111   011110110  1236899999998874 33   


Q ss_pred             ccCCCCCcCcccEEEEEEcCCCCcccCCCcccc------cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL------TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l------t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      +.++        .|.++++++++      .+.+      ..+.... ..++|+|||++||+....+. ....+|.++..+
T Consensus       230 ~~~~--------~v~v~~~~~g~------~~~~~~~~~~~~~~~~~-~~i~~spdg~~l~v~~~~~~-~~i~v~~~~~~~  293 (361)
T 3scy_A          230 EIGG--------TVIAFRYADGM------LDEIQTVAADTVNAQGS-GDIHLSPDGKYLYASNRLKA-DGVAIFKVDETN  293 (361)
T ss_dssp             TTTC--------EEEEEEEETTE------EEEEEEEESCSSCCCCE-EEEEECTTSSEEEEEECSSS-CEEEEEEECTTT
T ss_pred             CCCC--------eEEEEEecCCc------eEEeEEEecCCCCCCCc-ccEEECCCCCEEEEECCCCC-CEEEEEEEcCCC
Confidence            2334        68888877664      3221      1111112 23789999998877655412 125566665444


Q ss_pred             CCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463          394 PTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       394 ~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                        ++.+.+...    . .......+.|||||+++++.....+.-.+|.+|.++++++.+
T Consensus       294 --g~~~~~~~~----~-~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~  345 (361)
T 3scy_A          294 --GTLTKVGYQ----L-TGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI  345 (361)
T ss_dssp             --CCEEEEEEE----E-CSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred             --CcEEEeeEe----c-CCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence              454444331    0 112345689999999987775444433455577777766654

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.34  E-value=3.3e-10  Score=118.29  Aligned_cols=160  Identities=9%  Similarity=-0.023  Sum_probs=96.4

Q ss_pred             CEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          247 PVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       247 ~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ..+..+.|+||++ +++....+.   .|.+.|+.++++............   .....|+|++..++.+.+    .+|  
T Consensus       170 ~~V~~~~~~~~~~~~l~s~s~D~---~v~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~l~sg~----~dg--  237 (344)
T 4gqb_B          170 AQVTCVAASPHKDSVFLSCSEDN---RILLWDTRCPKPASQIGCSAPGYL---PTSLAWHPQQSEVFVFGD----ENG--  237 (344)
T ss_dssp             SCEEEEEECSSCTTEEEEEETTS---CEEEEETTSSSCEEECC----CCC---EEEEEECSSCTTEEEEEE----TTS--
T ss_pred             CceEEEEecCCCCCceeeecccc---ccccccccccceeeeeecceeecc---ceeeeecCCCCcceEEec----cCC--
Confidence            4466789999997 555444332   288889998876543322111111   236889998766654555    456  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEE-EcCCCCceEEEEEEEcCCCCCCcceeeec
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFL-STQGSPIVQHMYRINIADPTATPECITCD  404 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~-~~~~~~~~~~l~~~~~~~~~~~~~~lt~~  404 (790)
                            .|.++|+.+++     ....+..+...+.. ++|+|||..+++. +.++     .|.+.++..  ++...+.  
T Consensus       238 ------~v~~wd~~~~~-----~~~~~~~h~~~v~~-v~fsp~g~~~lasgs~D~-----~i~vwd~~~--~~~~~~~--  296 (344)
T 4gqb_B          238 ------TVSLVDTKSTS-----CVLSSAVHSQCVTG-LVFSPHSVPFLASLSEDC-----SLAVLDSSL--SELFRSQ--  296 (344)
T ss_dssp             ------EEEEEESCC-------CCEEEECCSSCEEE-EEECSSSSCCEEEEETTS-----CEEEECTTC--CEEEEEC--
T ss_pred             ------cEEEEECCCCc-----EEEEEcCCCCCEEE-EEEccCCCeEEEEEeCCC-----eEEEEECCC--CcEEEEc--
Confidence                  68899998776     24456555555555 7899999655444 4443     344556655  3322221  


Q ss_pred             ccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          405 LLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       405 ~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                           +....+..+.|||++++++.+.+..+  .|.+.++..
T Consensus       297 -----~H~~~V~~v~~sp~~~~llas~s~D~--~v~~w~v~~  331 (344)
T 4gqb_B          297 -----AHRDFVRDATWSPLNHSLLTTVGWDH--QVVHHVVPT  331 (344)
T ss_dssp             -----CCSSCEEEEEECSSSTTEEEEEETTS--CEEEEECCC
T ss_pred             -----CCCCCEEEEEEeCCCCeEEEEEcCCC--eEEEEECCC
Confidence                 24567889999999988777655433  355555543

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.33  E-value=6.8e-10  Score=119.66  Aligned_cols=332  Identities=8%  Similarity=0.048  Sum_probs=177.2

Q ss_pred             cCCceeEeCCCCC-ceEEEEecCCceeEEEecc--cCCCCCCCcCCCccccC----------CCCccccccCCCcceeEe
Q psy463            8 SSSSALWFSPSGN-NLAYASFDDNRTVIMTIPF--YGNPGHPSSQYTQAINL----------REPVLSRVNWANESVVAA   74 (790)
Q Consensus         8 ~~~~~~~wSPDG~-~iaf~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~----------~~~~~~~~~w~~~~~~~~   74 (790)
                      +...++.|||||+ .||.. ..++...+|.+..  ..+...-..........          +...+..+.|++++..+.
T Consensus        46 ~~v~~~~~s~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  124 (425)
T 1r5m_A           46 DNIVSSTWNPLDESILAYG-EKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIV  124 (425)
T ss_dssp             SCCSEEEECSSCTTEEEEE-ETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEE
T ss_pred             CceEEEEECCCCCcEEEEe-cCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEE
Confidence            5678899999999 77755 4577788887731  11210000000000111          122344566777666543


Q ss_pred             eeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcC
Q psy463           75 WVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA  154 (790)
Q Consensus        75 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~  154 (790)
                      -.....   .+.+++ .++.+...+....  ..   .....|+|||+.|+..+. +            +.|.++++.++.
T Consensus       125 ~~~~dg---~i~i~~-~~~~~~~~~~~~~--~~---v~~~~~~~~~~~l~~~~~-d------------~~i~iwd~~~~~  182 (425)
T 1r5m_A          125 TGVENG---ELRLWN-KTGALLNVLNFHR--AP---IVSVKWNKDGTHIISMDV-E------------NVTILWNVISGT  182 (425)
T ss_dssp             EEETTS---CEEEEE-TTSCEEEEECCCC--SC---EEEEEECTTSSEEEEEET-T------------CCEEEEETTTTE
T ss_pred             EEeCCC---eEEEEe-CCCCeeeeccCCC--cc---EEEEEECCCCCEEEEEec-C------------CeEEEEECCCCc
Confidence            333222   244555 3343333222111  11   134689999998876442 1            268888887663


Q ss_pred             CccCCcceeccccceEE--------------EEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCc
Q psy463          155 GIKDKVPVPLTRGRFTV--------------TEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK  220 (790)
Q Consensus       155 ~~~~~~~~~lt~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  220 (790)
                           ....+.......              ..-..|.+++   .++...           ....|+++++.+++.    
T Consensus       183 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----------~~g~i~~~d~~~~~~----  239 (425)
T 1r5m_A          183 -----VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD---KFVIPG-----------PKGAIFVYQITEKTP----  239 (425)
T ss_dssp             -----EEEEECCC---------------CCCBSCCEEEETT---EEEEEC-----------GGGCEEEEETTCSSC----
T ss_pred             -----EEEEeeccccCccceeeccccCCcceeeEEEEcCCC---EEEEEc-----------CCCeEEEEEcCCCce----
Confidence                 112221111110              1112333332   222221           226888889887652    


Q ss_pred             CCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCC
Q psy463          221 VPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFD  300 (790)
Q Consensus       221 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~  300 (790)
                       ...+.                 .....+..+.|+|||++++....+.   .|.++++.+++........  ..   ...
T Consensus       240 -~~~~~-----------------~~~~~i~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~--~~---~i~  293 (425)
T 1r5m_A          240 -TGKLI-----------------GHHGPISVLEFNDTNKLLLSASDDG---TLRIWHGGNGNSQNCFYGH--SQ---SIV  293 (425)
T ss_dssp             -SEEEC-----------------CCSSCEEEEEEETTTTEEEEEETTS---CEEEECSSSBSCSEEECCC--SS---CEE
T ss_pred             -eeeec-----------------cCCCceEEEEECCCCCEEEEEcCCC---EEEEEECCCCccceEecCC--Cc---cEE
Confidence             12222                 3455678999999999655554332   2889998887765544321  11   144


Q ss_pred             ceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCC
Q psy463          301 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS  380 (790)
Q Consensus       301 ~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~  380 (790)
                      ...|+||| .|+ +.+    .+|        .|.++|+.+++     ....+......+.. +.|+|+++.|+..+.++.
T Consensus       294 ~~~~~~~~-~l~-~~~----~d~--------~i~i~d~~~~~-----~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~  353 (425)
T 1r5m_A          294 SASWVGDD-KVI-SCS----MDG--------SVRLWSLKQNT-----LLALSIVDGVPIFA-GRISQDGQKYAVAFMDGQ  353 (425)
T ss_dssp             EEEEETTT-EEE-EEE----TTS--------EEEEEETTTTE-----EEEEEECTTCCEEE-EEECTTSSEEEEEETTSC
T ss_pred             EEEECCCC-EEE-EEe----CCC--------cEEEEECCCCc-----EeEecccCCccEEE-EEEcCCCCEEEEEECCCe
Confidence            78999999 444 454    455        78999998776     13334333434444 789999998877766643


Q ss_pred             CceEEEEEEEcCCCCCC------------------cceeeecccccCCCcc--cEEEEEEecCCcEEEEEeecCCCCeEE
Q psy463          381 PIVQHMYRINIADPTAT------------------PECITCDLLTSANQKC--SYSGATFSTNVSYYVLSCIGPGIPEIM  440 (790)
Q Consensus       381 ~~~~~l~~~~~~~~~~~------------------~~~lt~~~~~~~~~~~--~~~~~~~s~dg~~~~~~~~~~~~~~i~  440 (790)
                         ..+|  ++..  ++                  .+.+..    ......  .+..+.|+|++++++.....   ..|.
T Consensus       354 ---i~i~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~  419 (425)
T 1r5m_A          354 ---VNVY--DLKK--LNSKSRSLYGNRDGILNPLPIPLYAS----YQSSQDNDYIFDLSWNCAGNKISVAYSL---QEGS  419 (425)
T ss_dssp             ---EEEE--ECHH--HHC--------------CEECCEEEE----ECCTTCCCCEEEEEECTTSSEEEEEESS---SCCE
T ss_pred             ---EEEE--ECCC--CccceeeeecccccccCcccchhhhh----hcCcccCCceEEEEccCCCceEEEEecC---ceEE
Confidence               4444  4432  11                  001111    111322  78899999999988665433   2356


Q ss_pred             EEecC
Q psy463          441 LFDKT  445 (790)
Q Consensus       441 ~~~~~  445 (790)
                      +++++
T Consensus       420 iw~~~  424 (425)
T 1r5m_A          420 VVAIP  424 (425)
T ss_dssp             EEECC
T ss_pred             EEeec
Confidence            66654

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.33  E-value=9e-10  Score=124.31  Aligned_cols=303  Identities=15%  Similarity=0.138  Sum_probs=165.8

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      ..++.|+|||+.|+..+. ++...+|.  ..+..       ......+...+..+.+++++..+.-....   -.+.+++
T Consensus       265 v~~v~~~~d~~~l~~~~~-d~~i~~w~--~~~~~-------~~~~~~h~~~v~~~~~~~~~~~l~t~~~d---~~i~~w~  331 (577)
T 2ymu_A          265 VNGVAFRPDGQTIASASD-DKTVKLWN--RNGQL-------LQTLTGHSSSVWGVAFSPDGQTIASASDD---KTVKLWN  331 (577)
T ss_dssp             EEEEEECTTSSEEEEEET-TSCEEEEE--TTSCE-------EEEECCCSSCEEEEEECTTSSEEEEEETT---SCEEEEE
T ss_pred             EEEEEEcCCCCEEEEEeC-CCEEEEEe--CCCcE-------EEEEecCCCCeEEEEECCCCCEEEEEeCC---CeEEEEe
Confidence            356789999999987653 55555554  33331       11111122223334555555544322221   1244555


Q ss_pred             CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463           90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF  169 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~  169 (790)
                      ..+.....+.. ...     ......|+|||+.|+.... +            +.|.+++..+.      ....+.....
T Consensus       332 ~~~~~~~~~~~-~~~-----~v~~~~~s~~g~~l~~~~~-d------------g~v~~~~~~~~------~~~~~~~~~~  386 (577)
T 2ymu_A          332 RNGQHLQTLTG-HSS-----SVWGVAFSPDGQTIASASD-D------------KTVKLWNRNGQ------LLQTLTGHSS  386 (577)
T ss_dssp             TTSCEEEEECC-CSS-----CEEEEEECTTSSEEEEEET-T------------SEEEEEETTCC------EEEEEECCSS
T ss_pred             CCCCeeEEEeC-CCC-----CEEEEEECCCCCEEEEEeC-C------------CEEEEEcCCCC------EEEEecCCCC
Confidence            54433322211 110     1123588999998876442 1            25777775433      2333443333


Q ss_pred             EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEE
Q psy463          170 TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVL  249 (790)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~  249 (790)
                      .+.. +.++++++. ++..+.            ...|.+++..+..      ...+.                 .....+
T Consensus       387 ~v~~-~~~s~dg~~-l~~~~~------------d~~v~~~~~~~~~------~~~~~-----------------~~~~~v  429 (577)
T 2ymu_A          387 SVRG-VAFSPDGQT-IASASD------------DKTVKLWNRNGQL------LQTLT-----------------GHSSSV  429 (577)
T ss_dssp             CEEE-EEECTTSSC-EEEEET------------TSEEEEECTTCCE------EEEEE-----------------CCSSCE
T ss_pred             CeEE-EEECCCCCE-EEEEeC------------CCEEEEEeCCCCE------EEEec-----------------CCCCCe
Confidence            3433 356665542 222211            1466666654321      12222                 344567


Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      ..+.||||+++++....+.   .|.+++..+.....+....      .......|||||+.|+ +.+    .++      
T Consensus       430 ~~~~~s~d~~~l~~~~~d~---~v~~w~~~~~~~~~~~~~~------~~v~~~~~spd~~~la-s~~----~d~------  489 (577)
T 2ymu_A          430 WGVAFSPDDQTIASASDDK---TVKLWNRNGQLLQTLTGHS------SSVRGVAFSPDGQTIA-SAS----DDK------  489 (577)
T ss_dssp             EEEEECTTSSEEEEEETTS---EEEEEETTSCEEEEEECCS------SCEEEEEECTTSCEEE-EEE----TTS------
T ss_pred             EEEEECCCCCEEEEEcCCC---EEEEEECCCCEEEEEcCCC------CCEEEEEEcCCCCEEE-EEe----CCC------
Confidence            7899999999666554432   3777887554444333221      1134689999999887 555    455      


Q ss_pred             ccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccC
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSA  409 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~  409 (790)
                        .|.+++.++..      .+.+..+...+.. ++|+|||+.|+..+.++     .|...+..+  .....+..      
T Consensus       490 --~i~iw~~~~~~------~~~~~~h~~~v~~-l~~s~dg~~l~s~~~dg-----~v~lwd~~~--~~~~~~~~------  547 (577)
T 2ymu_A          490 --TVKLWNRNGQL------LQTLTGHSSSVRG-VAFSPDGQTIASASDDK-----TVKLWNRNG--QLLQTLTG------  547 (577)
T ss_dssp             --EEEEEETTSCE------EEEEECCSSCEEE-EEECTTSSCEEEEETTS-----EEEEECTTS--CEEEEEEC------
T ss_pred             --EEEEEcCCCCE------EEEEeCCCCCEEE-EEEcCCCCEEEEEECcC-----EEEEEeCCC--CEEEEEcC------
Confidence              68888875543      5566655555655 88999999887666553     444445543  22222222      


Q ss_pred             CCcccEEEEEEecCCcEEEEE
Q psy463          410 NQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       410 ~~~~~~~~~~~s~dg~~~~~~  430 (790)
                       ....+..+.|||||++|+..
T Consensus       548 -h~~~v~~~~fs~dg~~l~s~  567 (577)
T 2ymu_A          548 -HSSSVWGVAFSPDGQTIASA  567 (577)
T ss_dssp             -CSSCEEEEEECTTSSCEEEE
T ss_pred             -CCCCEEEEEEcCCCCEEEEE
Confidence             45678889999999988643

>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A

Probab=99.32  E-value=5.7e-12  Score=137.03  Aligned_cols=225  Identities=16%  Similarity=0.161  Sum_probs=133.5

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCC-CCCChhhhHhhhhccCCc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRN-SALKGNTLKYAGYRRLGT  561 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG-~~~~g~~~~~~~~~~~~~  561 (790)
                      +...++.|...    .+++|+||++|||+........+.. ....++++.|++|+.+|||. ..+++..- .......+.
T Consensus        83 L~l~v~~P~~~----~~~~PviV~iHGGg~~~g~~~~~~~-~~~~la~~g~~vvv~~nYRlg~~Gf~~~~-~~~~~~~~n  156 (489)
T 1qe3_A           83 LYVNVFAPDTP----SQNLPVMVWIHGGAFYLGAGSEPLY-DGSKLAAQGEVIVVTLNYRLGPFGFLHLS-SFDEAYSDN  156 (489)
T ss_dssp             CEEEEEEECSS----CCSEEEEEEECCSTTTSCCTTSGGG-CCHHHHHHHTCEEEEECCCCHHHHSCCCT-TTCTTSCSC
T ss_pred             CEEEEEeCCCC----CCCCCEEEEECCCccccCCCCCccc-CHHHHHhcCCEEEEecCccCcccccCccc-cccccCCCC
Confidence            55567778652    2348999999998854322222111 23344443459999999993 22221110 000012233


Q ss_pred             cchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCCCccccccc--chhh---h
Q psy463          562 VEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVTDWIYYDTI--YSER---Y  633 (790)
Q Consensus       562 ~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~~~~~~~~~--~~~~---~  633 (790)
                      ..+.|+.++++|+.++..  ..|++||+|+|+|+||.+++.++.... ...|+++|+.+|...+......  ....   .
T Consensus       157 ~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~  236 (489)
T 1qe3_A          157 LGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQV  236 (489)
T ss_dssp             HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence            457899999999987521  268899999999999999988877431 3489999999997644321100  0000   0


Q ss_pred             cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhh
Q psy463          634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKI  713 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  713 (790)
                      +|.+  .+            .++.+.             .++   ..++.++..                          
T Consensus       237 ~g~~--~~------------~~~~Lr-------------~~~---~~~l~~~~~--------------------------  260 (489)
T 1qe3_A          237 LGIN--ES------------QLDRLH-------------TVA---AEDLLKAAD--------------------------  260 (489)
T ss_dssp             HTCC--TT------------CGGGGG-------------TSC---HHHHHHHHH--------------------------
T ss_pred             cCCC--HH------------HHHHHH-------------cCC---HHHHHHHHH--------------------------
Confidence            1111  00            000000             000   111111110                          


Q ss_pred             hhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463          714 AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG  772 (790)
Q Consensus       714 ~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~  772 (790)
                        .+...... ..|.+++++..|..+.+++..++++..+..++++.+-..++++|.+..
T Consensus       261 --~~~~~~~~-~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp~~~g~~~~Eg~~~~~  316 (489)
T 1qe3_A          261 --QLRIAEKE-NIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYLFFT  316 (489)
T ss_dssp             --HHHTSTTC-CTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTCCEEEEEETTGGGGTCC
T ss_pred             --Hhhhcccc-ccCCccceEeECCeecCcCHHHHHhcCCCCCCCEEEeeecchhHhhcc
Confidence              00000122 455778899999999999999999988888899999999999998764

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.31  E-value=4.9e-10  Score=116.50  Aligned_cols=254  Identities=11%  Similarity=0.115  Sum_probs=145.1

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      +.|+++++.++.+....+            .|.++|+++++     ....+..+....  -+.++++++  .+|+.... 
T Consensus         3 ~~~~~~~~~~~v~~~~~~------------~v~~~d~~~~~-----~~~~~~~~~~~~--~~~~s~dg~--~l~~~~~~-   60 (331)
T 3u4y_A            3 AMFQTTSNFGIVVEQHLR------------RISFFSTDTLE-----ILNQITLGYDFV--DTAITSDCS--NVVVTSDF-   60 (331)
T ss_dssp             ----CCCCEEEEEEGGGT------------EEEEEETTTCC-----EEEEEECCCCEE--EEEECSSSC--EEEEEEST-
T ss_pred             eeEcCCCCEEEEEecCCC------------eEEEEeCcccc-----eeeeEEccCCcc--eEEEcCCCC--EEEEEeCC-
Confidence            356788887776654433            89999998874     233333333333  567788776  44444321 


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                               ...|+++|+++++..    ...++                 ........+.|||||++++......+...|
T Consensus        61 ---------~~~i~~~d~~~~~~~----~~~~~-----------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i  110 (331)
T 3u4y_A           61 ---------CQTLVQIETQLEPPK----VVAIQ-----------------EGQSSMADVDITPDDQFAVTVTGLNHPFNM  110 (331)
T ss_dssp             ---------TCEEEEEECSSSSCE----EEEEE-----------------ECSSCCCCEEECTTSSEEEECCCSSSSCEE
T ss_pred             ---------CCeEEEEECCCCcee----EEecc-----------------cCCCCccceEECCCCCEEEEecCCCCcccE
Confidence                     158999999887520    01111                 111112237899999966644333233369


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      +++|+++++.........  .    ...+.|+|||+.|++...    ..+       ..|.+++++..........+.+.
T Consensus       111 ~v~d~~~~~~~~~~~~~~--~----~~~~~~spdg~~l~~~~~----~~~-------~~i~~~~~~~~g~~~~~~~~~~~  173 (331)
T 3u4y_A          111 QSYSFLKNKFISTIPIPY--D----AVGIAISPNGNGLILIDR----SSA-------NTVRRFKIDADGVLFDTGQEFIS  173 (331)
T ss_dssp             EEEETTTTEEEEEEECCT--T----EEEEEECTTSSCEEEEEE----TTT-------TEEEEEEECTTCCEEEEEEEEEC
T ss_pred             EEEECCCCCeEEEEECCC--C----ccceEECCCCCEEEEEec----CCC-------ceEEEEEECCCCcEeecCCcccc
Confidence            999999988765544321  1    247899999998874433    223       22666665533200000011222


Q ss_pred             CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          354 RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       354 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      .+. ... .+.|+|||+++|+.....    ..|+++++.+  ++. +.+.. +.    .......+.|||||++++++..
T Consensus       174 ~~~-~~~-~~~~spdg~~l~v~~~~~----~~v~v~d~~~--~~~~~~~~~-~~----~~~~~~~~~~spdg~~l~v~~~  240 (331)
T 3u4y_A          174 GGT-RPF-NITFTPDGNFAFVANLIG----NSIGILETQN--PENITLLNA-VG----TNNLPGTIVVSRDGSTVYVLTE  240 (331)
T ss_dssp             SSS-SEE-EEEECTTSSEEEEEETTT----TEEEEEECSS--TTSCEEEEE-EE----CSSCCCCEEECTTSSEEEEECS
T ss_pred             CCC-Ccc-ceEECCCCCEEEEEeCCC----CeEEEEECCC--Ccccceeee-cc----CCCCCceEEECCCCCEEEEEEc
Confidence            222 223 378999999888876553    3677788766  443 11111 00    1234456899999998876643


Q ss_pred             cCCCCeEEEEecCCCeEEE
Q psy463          433 GPGIPEIMLFDKTGQRLLY  451 (790)
Q Consensus       433 ~~~~~~i~~~~~~~~~~~~  451 (790)
                        +...|+++|+++++...
T Consensus       241 --~~~~i~~~d~~~~~~~~  257 (331)
T 3u4y_A          241 --STVDVFNFNQLSGTLSF  257 (331)
T ss_dssp             --SEEEEEEEETTTTEEEE
T ss_pred             --CCCEEEEEECCCCceee
Confidence              33468899998876643

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.31  E-value=2.6e-09  Score=120.48  Aligned_cols=319  Identities=16%  Similarity=0.147  Sum_probs=172.1

Q ss_pred             ceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC
Q psy463           11 SALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI   90 (790)
Q Consensus        11 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~   90 (790)
                      .+++|||||+.|+..+. ++...+|.  ..+..       ......+...+..+.|++++..+.-.....   .+.+++.
T Consensus       225 ~~~~~s~dg~~l~~~~~-d~~i~~w~--~~~~~-------~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~---~i~~w~~  291 (577)
T 2ymu_A          225 RGVAFSPDGQTIASASD-DKTVKLWN--RNGQL-------LQTLTGHSSSVNGVAFRPDGQTIASASDDK---TVKLWNR  291 (577)
T ss_dssp             EEEEECTTSSCEEEEET-TSCEEEEC--TTSCE-------EEEECCCSSCEEEEEECTTSSEEEEEETTS---CEEEEET
T ss_pred             EEEEECCCCCEEEEEeC-CCEEEEEe--CCCCE-------EEEEecCCCCEEEEEEcCCCCEEEEEeCCC---EEEEEeC
Confidence            56889999999987653 55555553  33321       111122222334455666655443222221   2344554


Q ss_pred             CCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceE
Q psy463           91 NEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT  170 (790)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~  170 (790)
                      . +++...+......     .....|+|||+.|+..+. ++            .|.++++++..      ...+......
T Consensus       292 ~-~~~~~~~~~h~~~-----v~~~~~~~~~~~l~t~~~-d~------------~i~~w~~~~~~------~~~~~~~~~~  346 (577)
T 2ymu_A          292 N-GQLLQTLTGHSSS-----VWGVAFSPDGQTIASASD-DK------------TVKLWNRNGQH------LQTLTGHSSS  346 (577)
T ss_dssp             T-SCEEEEECCCSSC-----EEEEEECTTSSEEEEEET-TS------------CEEEEETTSCE------EEEECCCSSC
T ss_pred             C-CcEEEEEecCCCC-----eEEEEECCCCCEEEEEeC-CC------------eEEEEeCCCCe------eEEEeCCCCC
Confidence            3 2222222211111     123578999998875442 11            46666665442      2223333223


Q ss_pred             EEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEE
Q psy463          171 VTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLS  250 (790)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~  250 (790)
                      +.. ..+++++.  .+....           ....|.+.+..+..      ...+.                 .....+.
T Consensus       347 v~~-~~~s~~g~--~l~~~~-----------~dg~v~~~~~~~~~------~~~~~-----------------~~~~~v~  389 (577)
T 2ymu_A          347 VWG-VAFSPDGQ--TIASAS-----------DDKTVKLWNRNGQL------LQTLT-----------------GHSSSVR  389 (577)
T ss_dssp             EEE-EEECTTSS--EEEEEE-----------TTSEEEEEETTCCE------EEEEE-----------------CCSSCEE
T ss_pred             EEE-EEECCCCC--EEEEEe-----------CCCEEEEEcCCCCE------EEEec-----------------CCCCCeE
Confidence            322 35566554  222211           11356666654321      12222                 3445678


Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  330 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~  330 (790)
                      .+.|||||++++....+.   .|.+++..+.....+....   .   ......||||++.|+ +.+    .++       
T Consensus       390 ~~~~s~dg~~l~~~~~d~---~v~~~~~~~~~~~~~~~~~---~---~v~~~~~s~d~~~l~-~~~----~d~-------  448 (577)
T 2ymu_A          390 GVAFSPDGQTIASASDDK---TVKLWNRNGQLLQTLTGHS---S---SVWGVAFSPDDQTIA-SAS----DDK-------  448 (577)
T ss_dssp             EEEECTTSSCEEEEETTS---EEEEECTTCCEEEEEECCS---S---CEEEEEECTTSSEEE-EEE----TTS-------
T ss_pred             EEEECCCCCEEEEEeCCC---EEEEEeCCCCEEEEecCCC---C---CeEEEEECCCCCEEE-EEc----CCC-------
Confidence            899999999555544332   3777776544333333211   1   134689999999887 554    345       


Q ss_pred             cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCC
Q psy463          331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSAN  410 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~  410 (790)
                       .|.+++..+..      ...+......+.. ++|+||++.|+..+.++     .|...+..+  ...+.+..       
T Consensus       449 -~v~~w~~~~~~------~~~~~~~~~~v~~-~~~spd~~~las~~~d~-----~i~iw~~~~--~~~~~~~~-------  506 (577)
T 2ymu_A          449 -TVKLWNRNGQL------LQTLTGHSSSVRG-VAFSPDGQTIASASDDK-----TVKLWNRNG--QLLQTLTG-------  506 (577)
T ss_dssp             -EEEEEETTSCE------EEEEECCSSCEEE-EEECTTSCEEEEEETTS-----EEEEEETTS--CEEEEEEC-------
T ss_pred             -EEEEEECCCCE------EEEEcCCCCCEEE-EEEcCCCCEEEEEeCCC-----EEEEEcCCC--CEEEEEeC-------
Confidence             68888876544      5556655555555 88999999887766653     444455544  22233322       


Q ss_pred             CcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          411 QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       411 ~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                      ....+..+.|||||++++....   -..|.++|..+..+.
T Consensus       507 h~~~v~~l~~s~dg~~l~s~~~---dg~v~lwd~~~~~~~  543 (577)
T 2ymu_A          507 HSSSVRGVAFSPDGQTIASASD---DKTVKLWNRNGQLLQ  543 (577)
T ss_dssp             CSSCEEEEEECTTSSCEEEEET---TSEEEEECTTSCEEE
T ss_pred             CCCCEEEEEEcCCCCEEEEEEC---cCEEEEEeCCCCEEE
Confidence            4557888999999998865432   245778776554333

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=99.28  E-value=6.9e-10  Score=128.54  Aligned_cols=256  Identities=9%  Similarity=0.092  Sum_probs=152.4

Q ss_pred             ccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEc---CCc--CCccCCcc--eecccc-ceEEEEEEeee-ccCCccEEE
Q psy463          117 SSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL---DDQ--AGIKDKVP--VPLTRG-RFTVTEILAWD-ERENNPLLI  187 (790)
Q Consensus       117 spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~---~~~--~~~~~~~~--~~lt~~-~~~~~~~~~~~-~~~~~~~~~  187 (790)
                      .++|++++|.....+.        ....+++.+.   +++  .  .+.+.  ..+..+ .+....-..|+ |+++. ++|
T Consensus       123 ~~~g~~~yy~~~~~g~--------~~~vl~r~~~~~~~~~~~~--~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~-lAy  191 (751)
T 2xe4_A          123 YVYGKYRYYTREVKGK--------PYKIYCRVFTDKEPGDVAA--EEVIIDVNQVAEGKAFCDVMEVKPAPPEHDL-VAF  191 (751)
T ss_dssp             EEETTEEEEEEECTTC--------CSCEEEEEETTSCTTCTTT--CEEEEEHHHHTTTCSCCEEEEEEECTTTTCE-EEE
T ss_pred             eEECCEEEEEEECCCC--------ceeEEEEEcCCCCCCCCcC--CEEEechhHhccCCCeEEEeeeEecCCCCCE-EEE
Confidence            4799999998653321        1336778775   332  1  00000  111111 22233345788 77664 666


Q ss_pred             EecccCCCCCCCccccceeEEEecCCc-ccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEec
Q psy463          188 LSHNQESDGSTPVDSWDHLTFIDLDDQ-AGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNR  266 (790)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r  266 (790)
                      .....+.       ....||++|+++| +.  +  +..+.                    .....+.|||||+.++++..
T Consensus       192 ~~~~~G~-------~~~~l~v~dl~~g~~~--l--~~~~~--------------------~~~~~~~WspDg~~l~y~~~  240 (751)
T 2xe4_A          192 SVDMSGN-------EVYTIEFKRISDPSQT--I--ADKVS--------------------GTNGEIVWGPDHTSLFYVTK  240 (751)
T ss_dssp             EEESSSS-------SCEEEEEEETTCTTCC--C--CCCEE--------------------EECSCCEECSSTTEEEEEEE
T ss_pred             EEeCCCC-------ceEEEEEEECCCCCEe--C--Ccccc--------------------CceeeEEEecCCCEEEEEEE
Confidence            6653222       1257999999998 51  1  11222                    11346899999995555543


Q ss_pred             c-Cc-ceEEEEEECCCCcee--EEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCC
Q psy463          267 V-QN-RARITRCSINEGTCD--VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       267 ~-~~-~~~i~~~~~~~g~~~--~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                      . .. ..+||+.++.++...  .++.... ..+   ...+.|||||++|++...    ..+      ..+||++|+++++
T Consensus       241 d~~~~~~~v~~~~lgt~~~~~~lv~~~~~-~~~---~~~~~~SpDg~~l~~~~~----~~~------~~~l~~~d~~~~~  306 (751)
T 2xe4_A          241 DETLRENKVWRHVMGKLQSEDVCLYEEHN-PLF---SAFMYKAADTNTLCIGSQ----SPE------TAEVHLLDLRKGN  306 (751)
T ss_dssp             CTTCCEEEEEEEETTSCGGGCEEEEECCC-TTC---EEEEEECTTSSEEEEEEE----CSS------CEEEEEEESSSCT
T ss_pred             CCCCCCCEEEEEECCCCchhcEEEEecCC-Cce---EEEEEECCCCCEEEEEec----CCC------CceEEEEECCCCC
Confidence            2 22 347999999887643  4444322 223   236899999999997664    233      5689999998752


Q ss_pred             cccCCCc--ccccCCCeEEeEEEeeecC---CCEEEEEEcCCCCceEEEEEEEcCCCCCCcce-eeecccccCCCcccEE
Q psy463          343 GIKDKVP--VPLTRGRFTVTEILAWDEK---ENNVYFLSTQGSPIVQHMYRINIADPTATPEC-ITCDLLTSANQKCSYS  416 (790)
Q Consensus       343 ~~~~~~~--~~lt~~~~~~~~~~~~s~d---g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~-lt~~~~~~~~~~~~~~  416 (790)
                      .    ..  +.|+.+...    +.|+++   |+.|||.++.......+||++++++. ++.+. +..       ......
T Consensus       307 ~----~~~~~~l~~~~~~----~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~-------~~~~~~  370 (751)
T 2xe4_A          307 A----HNTLEIVRPREKG----VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVD-------HSEDVF  370 (751)
T ss_dssp             T----CCCEEESSCCCTT----CCEEEEEETTTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEEC-------CCSSEE
T ss_pred             C----CceeEEeecCCCC----ceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEEC-------CCCCcE
Confidence            0    14  566654322    234444   88999999874112379999998742 23333 333       122223


Q ss_pred             EEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          417 GATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       417 ~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                      -..++++++++++.....+...|+++++
T Consensus       371 l~~~~~~~~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          371 MESIAVRSNYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             EEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred             EEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence            3446667888999888777889999996

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.28  E-value=3.2e-09  Score=111.93  Aligned_cols=303  Identities=10%  Similarity=0.071  Sum_probs=169.5

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...++.|||||++||..+ .++...+|.+..  ++      .......+...+..+.|++++..+.....   .-.+.++
T Consensus        34 ~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~--~~------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~iw  101 (369)
T 3zwl_B           34 PLTQVKYNKEGDLLFSCS-KDSSASVWYSLN--GE------RLGTLDGHTGTIWSIDVDCFTKYCVTGSA---DYSIKLW  101 (369)
T ss_dssp             CEEEEEECTTSCEEEEEE-SSSCEEEEETTT--CC------EEEEECCCSSCEEEEEECTTSSEEEEEET---TTEEEEE
T ss_pred             eEEEEEEcCCCCEEEEEe-CCCEEEEEeCCC--ch------hhhhhhhcCCcEEEEEEcCCCCEEEEEeC---CCeEEEE
Confidence            346788999999988765 456666665432  32      11122222333455677776665543332   2356777


Q ss_pred             eCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc
Q psy463           89 SINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR  168 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~  168 (790)
                      +..++++...+....      ......|+|+|+.++.........        .+.|.++++..+.     ....+... 
T Consensus       102 d~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~~~~~~--------~g~i~~~d~~~~~-----~~~~~~~~-  161 (369)
T 3zwl_B          102 DVSNGQCVATWKSPV------PVKRVEFSPCGNYFLAILDNVMKN--------PGSINIYEIERDS-----ATHELTKV-  161 (369)
T ss_dssp             ETTTCCEEEEEECSS------CEEEEEECTTSSEEEEEECCBTTB--------CCEEEEEEEEECT-----TTCCEEEE-
T ss_pred             ECCCCcEEEEeecCC------CeEEEEEccCCCEEEEecCCccCC--------CCEEEEEEecCCc-----cceeeccc-
Confidence            887777665554211      113468999999888765321100        1267777665442     01100000 


Q ss_pred             eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463          169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV  248 (790)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~  248 (790)
                                 ..                      ..+.                .+.               .+.....
T Consensus       162 -----------~~----------------------~~~~----------------~~~---------------~~~~~~~  177 (369)
T 3zwl_B          162 -----------SE----------------------EPIH----------------KII---------------THEGLDA  177 (369)
T ss_dssp             -----------CS----------------------SCSE----------------EEE---------------CCTTCCC
T ss_pred             -----------cc----------------------ceee----------------ecc---------------CCcCccc
Confidence                       00                      0000                000               0012225


Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCC-CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINE-GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      +..+.|+|||+.++....+.   .|.++|+.+ +.........  ..   ......|+|||+.|+ +.+    .+|    
T Consensus       178 ~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~--~~---~v~~~~~~~~~~~l~-~~~----~d~----  240 (369)
T 3zwl_B          178 ATVAGWSTKGKYIIAGHKDG---KISKYDVSNNYEYVDSIDLH--EK---SISDMQFSPDLTYFI-TSS----RDT----  240 (369)
T ss_dssp             EEEEEECGGGCEEEEEETTS---EEEEEETTTTTEEEEEEECC--SS---CEEEEEECTTSSEEE-EEE----TTS----
T ss_pred             eeEEEEcCCCCEEEEEcCCC---EEEEEECCCCcEeEEEEecC--CC---ceeEEEECCCCCEEE-Eec----CCc----
Confidence            67899999999665554432   389999987 4444333321  11   144789999999887 444    355    


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCC---------ceEEEEEEEcCCCCCCc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSP---------IVQHMYRINIADPTATP  398 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~---------~~~~l~~~~~~~~~~~~  398 (790)
                          .|.++|+.+++     ....+. ....+.. +.|+|+++.+++.+..+..         ....+...++..  ++.
T Consensus       241 ----~i~v~d~~~~~-----~~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~--~~~  307 (369)
T 3zwl_B          241 ----NSFLVDVSTLQ-----VLKKYE-TDCPLNT-AVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF--EEE  307 (369)
T ss_dssp             ----EEEEEETTTCC-----EEEEEE-CSSCEEE-EEECSSSSEEEEEECCC-------------CEEEEEETTT--CCE
T ss_pred             ----eEEEEECCCCc-----eeeeec-CCCCcee-EEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC--Ccc
Confidence                78999998776     122333 3333443 7899999998887765320         011455666654  332


Q ss_pred             ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          399 ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       399 ~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .....      +....+..+.|+||+++++....   -..|.+++++.
T Consensus       308 ~~~~~------~~~~~v~~~~~s~~~~~l~s~~~---dg~v~iw~~~~  346 (369)
T 3zwl_B          308 IGRVQ------GHFGPLNTVAISPQGTSYASGGE---DGFIRLHHFEK  346 (369)
T ss_dssp             EEEEE------CCSSCEEEEEECTTSSEEEEEET---TSEEEEEEECH
T ss_pred             hhhee------cccCcEEEEEECCCCCEEEEEcC---CCeEEEEECcc
Confidence            22111      14567888999999998765432   23577777654

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.27  E-value=2.8e-09  Score=113.68  Aligned_cols=224  Identities=13%  Similarity=0.131  Sum_probs=144.0

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|+++++++++     ....+..+. .+ .-+.|+++++  .+|++..          ....|+++|+.+++..     .
T Consensus        13 ~v~v~d~~~~~-----~~~~~~~~~-~~-~~~~~s~dg~--~l~~~~~----------~d~~i~v~d~~~~~~~-----~   68 (391)
T 1l0q_A           13 NISVIDVTSNK-----VTATIPVGS-NP-MGAVISPDGT--KVYVANA----------HSNDVSIIDTATNNVI-----A   68 (391)
T ss_dssp             EEEEEETTTTE-----EEEEEECSS-SE-EEEEECTTSS--EEEEEEG----------GGTEEEEEETTTTEEE-----E
T ss_pred             EEEEEECCCCe-----EEEEeecCC-Cc-ceEEECCCCC--EEEEECC----------CCCeEEEEECCCCeEE-----E
Confidence            79999988773     233333332 22 3356777766  4444432          1258999999887631     1


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR  303 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  303 (790)
                      .+                  ........+.|+|||+.++......  ..|+++|+.+++.........      ....+.
T Consensus        69 ~~------------------~~~~~v~~~~~spdg~~l~~~~~~~--~~v~v~d~~~~~~~~~~~~~~------~~~~~~  122 (391)
T 1l0q_A           69 TV------------------PAGSSPQGVAVSPDGKQVYVTNMAS--STLSVIDTTSNTVAGTVKTGK------SPLGLA  122 (391)
T ss_dssp             EE------------------ECSSSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEECSS------SEEEEE
T ss_pred             EE------------------ECCCCccceEECCCCCEEEEEECCC--CEEEEEECCCCeEEEEEeCCC------CcceEE
Confidence            11                  1223677899999999666554322  249999999988766554321      134789


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      |+|||+.|++..+    .++        .|+++|+.+++     ....+..+. .+. .+.|+|||+.|++.....    
T Consensus       123 ~s~dg~~l~~~~~----~~~--------~v~~~d~~~~~-----~~~~~~~~~-~~~-~~~~~~dg~~l~~~~~~~----  179 (391)
T 1l0q_A          123 LSPDGKKLYVTNN----GDK--------TVSVINTVTKA-----VINTVSVGR-SPK-GIAVTPDGTKVYVANFDS----  179 (391)
T ss_dssp             ECTTSSEEEEEET----TTT--------EEEEEETTTTE-----EEEEEECCS-SEE-EEEECTTSSEEEEEETTT----
T ss_pred             ECCCCCEEEEEeC----CCC--------EEEEEECCCCc-----EEEEEecCC-Ccc-eEEECCCCCEEEEEeCCC----
Confidence            9999999875554    344        79999998776     122333332 233 378999999887776543    


Q ss_pred             EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          384 QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      ..|+.+++.+  ++......       .......+.|+|+|++++..........++++|+.+++.
T Consensus       180 ~~v~~~d~~~--~~~~~~~~-------~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~  236 (391)
T 1l0q_A          180 MSISVIDTVT--NSVIDTVK-------VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI  236 (391)
T ss_dssp             TEEEEEETTT--TEEEEEEE-------CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred             CEEEEEECCC--CeEEEEEe-------cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE
Confidence            4688888876  43322222       233567789999999988776543457899999877544

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.27  E-value=3.7e-10  Score=117.54  Aligned_cols=280  Identities=11%  Similarity=0.020  Sum_probs=154.0

Q ss_pred             EEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCccee
Q psy463           84 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  163 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~  163 (790)
                      .+.+++..+++....+...... +  .....+|||||+.+++......            .|+++++.+++     ....
T Consensus        12 ~v~~~d~~~~~~~~~~~~~~~~-~--~~~~~~~s~dg~~l~v~~~~~~------------~v~~~d~~~~~-----~~~~   71 (337)
T 1pby_B           12 KLVVIDTEKMAVDKVITIADAG-P--TPMVPMVAPGGRIAYATVNKSE------------SLVKIDLVTGE-----TLGR   71 (337)
T ss_dssp             EEEEEETTTTEEEEEEECTTCT-T--CCCCEEECTTSSEEEEEETTTT------------EEEEEETTTCC-----EEEE
T ss_pred             eEEEEECCCCcEEEEEEcCCCC-C--CccceEEcCCCCEEEEEeCCCC------------eEEEEECCCCC-----eEee
Confidence            3455666666554433322100 0  1235689999999887664322            89999998774     2222


Q ss_pred             ccccc----eEEEEEEeeeccCCccEEEEecccCCCCCCCc-cccceeEEEecCCcccccCcCCccccccccceeehhhc
Q psy463          164 LTRGR----FTVTEILAWDERENNPLLILSHNQESDGSTPV-DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW  238 (790)
Q Consensus       164 lt~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~  238 (790)
                      +..+.    .....-..++++++  .+|+............ .....|+++|+++++...     .+.            
T Consensus        72 ~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-----~~~------------  132 (337)
T 1pby_B           72 IDLSTPEERVKSLFGAALSPDGK--TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK-----AFE------------  132 (337)
T ss_dssp             EECCBTTEEEECTTCEEECTTSS--EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE-----EEE------------
T ss_pred             EEcCCcccccccccceEECCCCC--EEEEEecccccccccccccCceEEEEECCCCcEEE-----EEe------------
Confidence            32211    00111246677665  3444321100000000 012689999998765311     111            


Q ss_pred             ccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccc
Q psy463          239 DEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN  318 (790)
Q Consensus       239 ~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~  318 (790)
                           . ......+.|||||+.++..+     ..|+++|+++++.......   ..+   .....|+|||+.+++...  
T Consensus       133 -----~-~~~~~~~~~s~dg~~l~~~~-----~~i~~~d~~~~~~~~~~~~---~~~---~~~~~~s~dg~~l~~~~~--  193 (337)
T 1pby_B          133 -----A-PRQITMLAWARDGSKLYGLG-----RDLHVMDPEAGTLVEDKPI---QSW---EAETYAQPDVLAVWNQHE--  193 (337)
T ss_dssp             -----C-CSSCCCEEECTTSSCEEEES-----SSEEEEETTTTEEEEEECS---TTT---TTTTBCCCBCCCCCCCCT--
T ss_pred             -----C-CCCcceeEECCCCCEEEEeC-----CeEEEEECCCCcEeeeeec---ccc---CCCceeCCCccEEeeecc--
Confidence                 1 11234578999999555553     2399999999876544432   111   124589999998763221  


Q ss_pred             cccCCC---------------CCcCcccEEEEEEcCCCCcccCCCccccc--CCCeEEeEEEeeecCCCEEEEEEcCCCC
Q psy463          319 QESDGS---------------TPVDSWDHLTFIDLDDQAGIKDKVPVPLT--RGRFTVTEILAWDEKENNVYFLSTQGSP  381 (790)
Q Consensus       319 ~~~~g~---------------~~~~~~~~l~~~d~~~~~~~~~~~~~~lt--~~~~~~~~~~~~s~dg~~l~~~~~~~~~  381 (790)
                        ..+.               .+......|+++|+.+++      ...+.  ........ +.|+|||+.+|+.  .   
T Consensus       194 --~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~------~~~~~~~~~~~~~~~-~~~s~dg~~l~~~--~---  259 (337)
T 1pby_B          194 --SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE------MAMREVRIMDVFYFS-TAVNPAKTRAFGA--Y---  259 (337)
T ss_dssp             --TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC------EEEEEEEECSSCEEE-EEECTTSSEEEEE--E---
T ss_pred             --CCCceeeeeeccccccccccccccccceEEEeCCCCC------ceEeecCCCCCceee-EEECCCCCEEEEe--C---
Confidence              1110               000001158899998876      43222  11112222 7899999988876  2   


Q ss_pred             ceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          382 IVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       382 ~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                        ..|+++++++  ++......       .......+.|+|||++++...   ....|.++|+++++.
T Consensus       260 --~~v~~~d~~~--~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~~---~~~~i~v~d~~~~~~  313 (337)
T 1pby_B          260 --NVLESFDLEK--NASIKRVP-------LPHSYYSVNVSTDGSTVWLGG---ALGDLAAYDAETLEK  313 (337)
T ss_dssp             --SEEEEEETTT--TEEEEEEE-------CSSCCCEEEECTTSCEEEEES---BSSEEEEEETTTCCE
T ss_pred             --CeEEEEECCC--CcCcceec-------CCCceeeEEECCCCCEEEEEc---CCCcEEEEECcCCcE
Confidence              4788888876  44322221       112445689999999887752   146799999877543

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.26  E-value=1.4e-10  Score=124.99  Aligned_cols=303  Identities=13%  Similarity=0.136  Sum_probs=153.9

Q ss_pred             cCCceeEeCCCCCceEEEE----------ecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeee
Q psy463            8 SSSSALWFSPSGNNLAYAS----------FDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVN   77 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~   77 (790)
                      .....+.|||||+.+.++.          ..++...+|.+......      .+.....+...+..+.|++++..+....
T Consensus        13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~------~~~~~~~~~~~v~~~~~s~~~~~l~~~~   86 (416)
T 2pm9_A           13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE------KPIASLQVDSKFNDLDWSHNNKIIAGAL   86 (416)
T ss_dssp             EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC------SCSCCCCCSSCEEEEEECSSSSCEEEEE
T ss_pred             hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC------cEEEEEecCCceEEEEECCCCCeEEEEc
Confidence            4567789999999666666          34555666655442210      0001111222344567777766543332


Q ss_pred             cccceeEEEEeeCCC---C-eeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCc
Q psy463           78 RVQNRARITRCSINE---G-TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQ  153 (790)
Q Consensus        78 r~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~  153 (790)
                      ..   -.+.+++..+   + .+...+...  ...   .....|+||+..++++...++            .|.++++.++
T Consensus        87 ~d---g~v~vw~~~~~~~~~~~~~~~~~h--~~~---v~~~~~~~~~~~~l~s~~~dg------------~v~iwd~~~~  146 (416)
T 2pm9_A           87 DN---GSLELYSTNEANNAINSMARFSNH--SSS---VKTVKFNAKQDNVLASGGNNG------------EIFIWDMNKC  146 (416)
T ss_dssp             SS---SCEEEECCSSTTSCCCEEEECCCS--SSC---CCEEEECSSSTTBEEEECSSS------------CEEBCBTTTT
T ss_pred             cC---CeEEEeecccccccccchhhccCC--ccc---eEEEEEcCCCCCEEEEEcCCC------------eEEEEECCCC
Confidence            22   2345566554   1 122222211  111   134689999444444443332            6888888766


Q ss_pred             CCccCC-cceec---cccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccc
Q psy463          154 AGIKDK-VPVPL---TRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR  229 (790)
Q Consensus       154 ~~~~~~-~~~~l---t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~  229 (790)
                      ...... ....+   ......+ .-+.|+++++. +++...           ....|.++|+.+++..     ..+... 
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~-~l~~~~-----------~dg~v~iwd~~~~~~~-----~~~~~~-  207 (416)
T 2pm9_A          147 TESPSNYTPLTPGQSMSSVDEV-ISLAWNQSLAH-VFASAG-----------SSNFASIWDLKAKKEV-----IHLSYT-  207 (416)
T ss_dssp             SSCTTTCCCBCCCCSCCSSCCC-CEEEECSSCTT-EEEEES-----------SSSCEEEEETTTTEEE-----EEECCC-
T ss_pred             ccccccccccccccccCCCCCe-eEEEeCCCCCc-EEEEEc-----------CCCCEEEEECCCCCcc-----eEEecc-
Confidence            300000 01111   1122222 23466666443 333222           1257888888876531     111100 


Q ss_pred             cceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCC-ceeEEEEEeCCCcccccCCceeEcc-
Q psy463          230 FTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEG-TCDVVFSRDLDRGWFEPFDHLRFSS-  306 (790)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~sp-  306 (790)
                      ..          .......+..+.|+|||. +++....+.....|.++|+.++ .+...... ...   .......|+| 
T Consensus       208 ~~----------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~-~~~---~~v~~~~~s~~  273 (416)
T 2pm9_A          208 SP----------NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQ-GHQ---KGILSLDWCHQ  273 (416)
T ss_dssp             CC----------SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCS-CCS---SCEEEEEECSS
T ss_pred             cc----------ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeec-Ccc---CceeEEEeCCC
Confidence            00          001146688999999986 6665554432224888898875 33322210 001   1244789999 


Q ss_pred             CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCC-CEEEEEEcCCCCceEE
Q psy463          307 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE-NNVYFLSTQGSPIVQH  385 (790)
Q Consensus       307 Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~  385 (790)
                      ||+.|+ +.+    .+|        .|.++|+.+++     ....+..+...+.. ++|+||+ +.|+..+.+     ..
T Consensus       274 ~~~~l~-s~~----~dg--------~v~~wd~~~~~-----~~~~~~~~~~~v~~-~~~s~~~~~~l~s~~~d-----~~  329 (416)
T 2pm9_A          274 DEHLLL-SSG----RDN--------TVLLWNPESAE-----QLSQFPARGNWCFK-TKFAPEAPDLFACASFD-----NK  329 (416)
T ss_dssp             CSSCEE-EEE----SSS--------EEEEECSSSCC-----EEEEEECSSSCCCC-EEECTTCTTEEEECCSS-----SE
T ss_pred             CCCeEE-EEe----CCC--------CEEEeeCCCCc-----cceeecCCCCceEE-EEECCCCCCEEEEEecC-----Cc
Confidence            888776 555    456        68999988776     23344444434444 7899999 544444333     24


Q ss_pred             EEEEEcCC
Q psy463          386 MYRINIAD  393 (790)
Q Consensus       386 l~~~~~~~  393 (790)
                      |...++..
T Consensus       330 i~iw~~~~  337 (416)
T 2pm9_A          330 IEVQTLQN  337 (416)
T ss_dssp             EEEEESCC
T ss_pred             EEEEEccC
Confidence            44445543

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.26  E-value=5.7e-10  Score=117.74  Aligned_cols=200  Identities=17%  Similarity=0.205  Sum_probs=118.2

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      -+|||||+.++..+...+           +.|.++|+.+++     ....+. +..++.. ++|+|+++. ++..+.   
T Consensus       139 v~fSpDg~~la~as~~~d-----------~~i~iwd~~~~~-----~~~~~~-~~~~V~~-v~fspdg~~-l~s~s~---  196 (365)
T 4h5i_A          139 VYISREGTVAAIASSKVP-----------AIMRIIDPSDLT-----EKFEIE-TRGEVKD-LHFSTDGKV-VAYITG---  196 (365)
T ss_dssp             EEECTTSSCEEEEESCSS-----------CEEEEEETTTTE-----EEEEEE-CSSCCCE-EEECTTSSE-EEEECS---
T ss_pred             EEEcCCCCEEEEEECCCC-----------CEEEEeECCCCc-----EEEEeC-CCCceEE-EEEccCCce-EEeccc---
Confidence            489999999887553222           278888988774     222222 2223333 467776652 222211   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE-eccCcceE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV-NRVQNRAR  272 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~-~r~~~~~~  272 (790)
                                ..+.+++..+++...     ..+               .......+..+.|||||+.++.. ........
T Consensus       197 ----------~~~~~~~~~~~~~~~-----~~~---------------~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~  246 (365)
T 4h5i_A          197 ----------SSLEVISTVTGSCIA-----RKT---------------DFDKNWSLSKINFIADDTVLIAASLKKGKGIV  246 (365)
T ss_dssp             ----------SCEEEEETTTCCEEE-----EEC---------------CCCTTEEEEEEEEEETTEEEEEEEESSSCCEE
T ss_pred             ----------eeEEEEEeccCccee-----eee---------------cCCCCCCEEEEEEcCCCCEEEEEecCCcceeE
Confidence                      456677766654211     111               00334567899999999954444 33333445


Q ss_pred             EEEEECCCCceeEEE--EEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463          273 ITRCSINEGTCDVVF--SRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  350 (790)
Q Consensus       273 i~~~~~~~g~~~~l~--~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~  350 (790)
                      +...+...+....+.  ...+...   .....+|||||+.|+ +.+    .++        .|.++|+.+++     ...
T Consensus       247 i~~~~~~~~~~~~~~~~~~~~~~~---~V~~~~~Spdg~~la-sgs----~D~--------~V~iwd~~~~~-----~~~  305 (365)
T 4h5i_A          247 LTKISIKSGNTSVLRSKQVTNRFK---GITSMDVDMKGELAV-LAS----NDN--------SIALVKLKDLS-----MSK  305 (365)
T ss_dssp             EEEEEEETTEEEEEEEEEEESSCS---CEEEEEECTTSCEEE-EEE----TTS--------CEEEEETTTTE-----EEE
T ss_pred             EeecccccceecceeeeeecCCCC---CeEeEEECCCCCceE-EEc----CCC--------EEEEEECCCCc-----EEE
Confidence            777777666543322  1111111   134688999999887 565    455        58899998876     133


Q ss_pred             c-ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463          351 P-LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       351 ~-lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~  390 (790)
                      . +..+...+.. ++|||||+.|+-.+.++.   .+||.++
T Consensus       306 ~~~~gH~~~V~~-v~fSpdg~~laS~S~D~t---vrvw~ip  342 (365)
T 4h5i_A          306 IFKQAHSFAITE-VTISPDSTYVASVSAANT---IHIIKLP  342 (365)
T ss_dssp             EETTSSSSCEEE-EEECTTSCEEEEEETTSE---EEEEECC
T ss_pred             EecCcccCCEEE-EEECCCCCEEEEEeCCCe---EEEEEcC
Confidence            3 3445556665 899999998887777643   5666554

>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*

Probab=99.26  E-value=5.6e-11  Score=121.66  Aligned_cols=121  Identities=15%  Similarity=0.141  Sum_probs=82.3

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG  560 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~  560 (790)
                      .++...++.|..+.  . ...+.||++||..++..  ..|... ....++++||.|+.+|++|++.....          
T Consensus        14 ~~l~~~i~~p~~~~--~-~~~~~VvllHG~~~~~~--~~~~~~-l~~~L~~~G~~v~~~d~~g~g~~~~~----------   77 (317)
T 1tca_A           14 SVLDAGLTCQGASP--S-SVSKPILLVPGTGTTGP--QSFDSN-WIPLSTQLGYTPCWISPPPFMLNDTQ----------   77 (317)
T ss_dssp             HHHHHTEEETTBCT--T-SCSSEEEEECCTTCCHH--HHHTTT-HHHHHHTTTCEEEEECCTTTTCSCHH----------
T ss_pred             HHHhheeeCCCCCC--C-CCCCeEEEECCCCCCcc--hhhHHH-HHHHHHhCCCEEEEECCCCCCCCcHH----------
Confidence            34555567776543  2 23456899999987631  113322 33445557999999999986542211          


Q ss_pred             ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC--CCceEEEEEeCCCCC
Q psy463          561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP--SNVFKCGISVAPVTD  621 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p--~~~~~~~v~~~~~~~  621 (790)
                       ...+++.+.++.+.+..+   ..++.++||||||.++.+++.+++  ...++.+|+++|...
T Consensus        78 -~~~~~l~~~i~~~~~~~g---~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~  136 (317)
T 1tca_A           78 -VNTEYMVNAITALYAGSG---NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK  136 (317)
T ss_dssp             -HHHHHHHHHHHHHHHHTT---SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred             -HHHHHHHHHHHHHHHHhC---CCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence             224677777888776433   478999999999999998888765  357899998888643

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.26  E-value=1.7e-09  Score=113.98  Aligned_cols=172  Identities=12%  Similarity=0.066  Sum_probs=97.8

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCc-cCC-c-------ceeccccceEEEEEEeeeccCCcc
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI-KDK-V-------PVPLTRGRFTVTEILAWDERENNP  184 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~-~~~-~-------~~~lt~~~~~~~~~~~~~~~~~~~  184 (790)
                      ..|+|||++|++.....+            .+++++++..... ..+ +       ...+..+.. . .-..|+++++  
T Consensus       160 ~~~spdg~~l~~~~~~~~------------~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~-~~~~~spdg~--  223 (361)
T 3scy_A          160 VRITPDGKYLLADDLGTD------------QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG-P-RHLIFNSDGK--  223 (361)
T ss_dssp             EEECTTSSEEEEEETTTT------------EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCC-E-EEEEECTTSS--
T ss_pred             EEECCCCCEEEEEeCCCC------------EEEEEEEcCCCCcccccceeecccccceecCCCCC-C-eEEEEcCCCC--
Confidence            589999999887663322            6777776544210 000 0       111222211 2 2357788776  


Q ss_pred             EEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE
Q psy463          185 LLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV  264 (790)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~  264 (790)
                      .+|+....          ...|.++++++++.+.+.   .+.           ..   .........+.|||||++++.+
T Consensus       224 ~l~v~~~~----------~~~v~v~~~~~g~~~~~~---~~~-----------~~---~~~~~~~~~i~~spdg~~l~v~  276 (361)
T 3scy_A          224 FAYLINEI----------GGTVIAFRYADGMLDEIQ---TVA-----------AD---TVNAQGSGDIHLSPDGKYLYAS  276 (361)
T ss_dssp             EEEEEETT----------TCEEEEEEEETTEEEEEE---EEE-----------SC---SSCCCCEEEEEECTTSSEEEEE
T ss_pred             EEEEEcCC----------CCeEEEEEecCCceEEeE---EEe-----------cC---CCCCCCcccEEECCCCCEEEEE
Confidence            45554321          157888887765421110   010           00   0112234689999999987777


Q ss_pred             ecc-CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCC
Q psy463          265 NRV-QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       265 ~r~-~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                      ++. .+.-.+|.++..+|+.+.+..... ..   ....+.|||||++|++...    .++      .-.+|.+|.++++
T Consensus       277 ~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~---~~~~~~~spdg~~l~~~~~----~~~------~v~v~~~d~~~g~  341 (361)
T 3scy_A          277 NRLKADGVAIFKVDETNGTLTKVGYQLT-GI---HPRNFIITPNGKYLLVACR----DTN------VIQIFERDQATGL  341 (361)
T ss_dssp             ECSSSCEEEEEEECTTTCCEEEEEEEEC-SS---CCCEEEECTTSCEEEEEET----TTT------EEEEEEECTTTCC
T ss_pred             CCCCCCEEEEEEEcCCCCcEEEeeEecC-CC---CCceEEECCCCCEEEEEEC----CCC------CEEEEEEECCCCc
Confidence            776 555556667666787666654432 11   1347899999998884332    334      4456668877776

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.26  E-value=5.7e-09  Score=118.41  Aligned_cols=213  Identities=11%  Similarity=0.065  Sum_probs=109.3

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecc-cceeEEEE
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRV-QNRARITR   87 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~-~~~~~~~~   87 (790)
                      ...+++|||||++||-.+ .++...+|.+......      .......+...+..+.|++++..+.-.... .....+.+
T Consensus        61 ~v~~~~~spdg~~lasg~-~d~~v~lWd~~~~~~~------~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~  133 (611)
T 1nr0_A           61 QTTVAKTSPSGYYCASGD-VHGNVRIWDTTQTTHI------LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL  133 (611)
T ss_dssp             CEEEEEECTTSSEEEEEE-TTSEEEEEESSSTTCC------EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred             ceEEEEECCCCcEEEEEe-CCCCEEEeECCCCcce------eeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE
Confidence            346788999999999765 4677777776431110      000112223345567788887755433322 12234555


Q ss_pred             eeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecccc
Q psy463           88 CSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG  167 (790)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~  167 (790)
                      ++.  +.+...+..+.  ..   .....|+||++.++.+...+.            .|.+++...++     ....+..+
T Consensus       134 wd~--~~~~~~l~gh~--~~---v~~v~f~p~~~~~l~s~s~D~------------~v~lwd~~~~~-----~~~~l~~H  189 (611)
T 1nr0_A          134 FDT--GTSNGNLTGQA--RA---MNSVDFKPSRPFRIISGSDDN------------TVAIFEGPPFK-----FKSTFGEH  189 (611)
T ss_dssp             TTT--CCBCBCCCCCS--SC---EEEEEECSSSSCEEEEEETTS------------CEEEEETTTBE-----EEEEECCC
T ss_pred             eeC--CCCcceecCCC--CC---ceEEEECCCCCeEEEEEeCCC------------eEEEEECCCCe-----Eeeeeccc
Confidence            552  32222111111  11   124589999986555544333            56677765542     22233333


Q ss_pred             ceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCC
Q psy463          168 RFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEP  247 (790)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~  247 (790)
                      ...+. -..|+|+++  + +++..          ....|.+.++.+++.........+.               ......
T Consensus       190 ~~~V~-~v~fspdg~--~-las~s----------~D~~i~lwd~~~g~~~~~~~~~~~~---------------~~~h~~  240 (611)
T 1nr0_A          190 TKFVH-SVRYNPDGS--L-FASTG----------GDGTIVLYNGVDGTKTGVFEDDSLK---------------NVAHSG  240 (611)
T ss_dssp             SSCEE-EEEECTTSS--E-EEEEE----------TTSCEEEEETTTCCEEEECBCTTSS---------------SCSSSS
T ss_pred             cCceE-EEEECCCCC--E-EEEEE----------CCCcEEEEECCCCcEeeeecccccc---------------ccccCC
Confidence            32333 346777654  2 22221          1146777787766532110000000               002345


Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCcee
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCD  284 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~  284 (790)
                      .+..+.|||||++++....+.   .|.+.|+.++++.
T Consensus       241 ~V~~v~~spdg~~l~s~s~D~---~v~lWd~~~~~~~  274 (611)
T 1nr0_A          241 SVFGLTWSPDGTKIASASADK---TIKIWNVATLKVE  274 (611)
T ss_dssp             CEEEEEECTTSSEEEEEETTS---EEEEEETTTTEEE
T ss_pred             CEEEEEECCCCCEEEEEeCCC---eEEEEeCCCCcee
Confidence            688999999999666554432   3777787776553

>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*

Probab=99.25  E-value=9.5e-10  Score=111.78  Aligned_cols=116  Identities=16%  Similarity=0.141  Sum_probs=83.0

Q ss_pred             EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcC--------CCCCCChhhhHh
Q psy463          482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDG--------RNSALKGNTLKY  553 (790)
Q Consensus       482 ~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~--------rG~~~~g~~~~~  553 (790)
                      .+.+.+++|.+     .++.|+||.+||+..        .        ...||+++.+++        +|+.++|. |..
T Consensus       124 sf~~~i~lP~g-----~~P~Pvii~~~~~~~--------~--------~~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~  181 (433)
T 4g4g_A          124 SFSASIRKPSG-----AGPFPAIIGIGGASI--------P--------IPSNVATITFNNDEFGAQMGSGSRGQGK-FYD  181 (433)
T ss_dssp             EEEEEEECCSS-----SCCEEEEEEESCCCS--------C--------CCTTSEEEEECHHHHSCCSSGGGTTCSH-HHH
T ss_pred             EEEEEEECCCC-----CCCccEEEEECCCcc--------c--------cCCCeEEEEeCCcccccccCCCcCCccc-ccc
Confidence            45788999974     567899999987421        1        137999999986        33334444 332


Q ss_pred             hh--hccCCccc--hhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          554 AG--YRRLGTVE--IYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       554 ~~--~~~~~~~~--~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      ..  ...++...  +-++..++++|.+.   .+.+|.+||+|+|||+||..++++++.++  +++++|+.++..+
T Consensus       182 ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~--Ri~~vi~~~sg~~  254 (433)
T 4g4g_A          182 LFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD--RIALTIPQESGAG  254 (433)
T ss_dssp             HHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT--TCSEEEEESCCTT
T ss_pred             ccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC--ceEEEEEecCCCC
Confidence            11  12344332  34888889999761   46799999999999999999999999875  8999998886543

>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*

Probab=99.25  E-value=6.6e-11  Score=125.60  Aligned_cols=120  Identities=11%  Similarity=0.038  Sum_probs=81.7

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhc-----CCeEEEEEcCCCCCCChhhhHh
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADN-----KDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~-----~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      +|.+|++....+..      ...+.||++||++++.   ..|.. ....+...     .||.|+++|++|+|.+....  
T Consensus        93 ~g~~i~~~~~~~~~------~~~~pllllHG~~~s~---~~~~~-~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~--  160 (408)
T 3g02_A           93 EGLTIHFAALFSER------EDAVPIALLHGWPGSF---VEFYP-ILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP--  160 (408)
T ss_dssp             TTEEEEEEEECCSC------TTCEEEEEECCSSCCG---GGGHH-HHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSC--
T ss_pred             CCEEEEEEEecCCC------CCCCeEEEECCCCCcH---HHHHH-HHHHHhcccccccCceEEEEECCCCCCCCCCCC--
Confidence            89999998886542      2346789999999873   23332 22233332     58999999999988655321  


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCC-ceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKT-RTAIWGWSYGGYATGLALALDPSNVFKCGISVAP  618 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~-ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~  618 (790)
                          ......+.++.+.+..++++++   .. +++++||||||.+++.++.++|. .....+..++
T Consensus       161 ----~~~~~~~~~~a~~~~~l~~~lg---~~~~~~lvG~S~Gg~ia~~~A~~~p~-~~~~~l~~~~  218 (408)
T 3g02_A          161 ----LDKDFGLMDNARVVDQLMKDLG---FGSGYIIQGGDIGSFVGRLLGVGFDA-CKAVHLNFCN  218 (408)
T ss_dssp             ----SSSCCCHHHHHHHHHHHHHHTT---CTTCEEEEECTHHHHHHHHHHHHCTT-EEEEEESCCC
T ss_pred             ----CCCCCCHHHHHHHHHHHHHHhC---CCCCEEEeCCCchHHHHHHHHHhCCC-ceEEEEeCCC
Confidence                0112456777777777776554   34 89999999999999999999853 5555544443

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.24  E-value=3.2e-09  Score=111.33  Aligned_cols=260  Identities=10%  Similarity=0.036  Sum_probs=150.7

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...|||||++++..+......      .....|+++|.++++     ....+..+..  ..-..++++++  .+|+....
T Consensus        45 ~~~~s~dg~~l~~~~~~~~~~------~~~~~v~~~d~~~~~-----~~~~~~~~~~--~~~~~~s~dg~--~l~v~~~~  109 (353)
T 3vgz_A           45 EMAYSQQENALWLATSQSRKL------DKGGVVYRLDPVTLE-----VTQAIHNDLK--PFGATINNTTQ--TLWFGNTV  109 (353)
T ss_dssp             EEEEETTTTEEEEEECCCTTT------EESEEEEEECTTTCC-----EEEEEEESSC--CCSEEEETTTT--EEEEEETT
T ss_pred             ceEECCCCCEEEEEcCCCcCC------CCCccEEEEcCCCCe-----EEEEEecCCC--cceEEECCCCC--EEEEEecC
Confidence            358999999998766432110      012389999988774     2333322221  11235666665  44444321


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                                ...|+++|+++++...     .+..+..       ..+ ..........+.|+|||+.++...... ...
T Consensus       110 ----------~~~v~~~d~~~~~~~~-----~~~~~~~-------~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~  165 (353)
T 3vgz_A          110 ----------NSAVTAIDAKTGEVKG-----RLVLDDR-------KRT-EEVRPLQPRELVADDATNTVYISGIGK-ESV  165 (353)
T ss_dssp             ----------TTEEEEEETTTCCEEE-----EEESCCC-------CCC-SSCCCCEEEEEEEETTTTEEEEEEESS-SCE
T ss_pred             ----------CCEEEEEeCCCCeeEE-----EEecCCC-------ccc-cccCCCCCceEEECCCCCEEEEEecCC-Cce
Confidence                      2589999998876321     1110000       000 001122356799999999666665322 234


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      |+++|+++++........+.     ....+.|+|||+.++ +..    .++        .|+++|+.+++     ....+
T Consensus       166 i~~~d~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~-~~~----~~~--------~i~~~d~~~~~-----~~~~~  222 (353)
T 3vgz_A          166 IWVVDGGNIKLKTAIQNTGK-----MSTGLALDSEGKRLY-TTN----ADG--------ELITIDTADNK-----ILSRK  222 (353)
T ss_dssp             EEEEETTTTEEEEEECCCCT-----TCCCCEEETTTTEEE-EEC----TTS--------EEEEEETTTTE-----EEEEE
T ss_pred             EEEEcCCCCceEEEecCCCC-----ccceEEECCCCCEEE-EEc----CCC--------eEEEEECCCCe-----EEEEE
Confidence            99999998877655431111     134789999999887 443    334        78999998876     12222


Q ss_pred             cCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEE
Q psy463          353 TRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVL  429 (790)
Q Consensus       353 t~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~  429 (790)
                      ..+   .......+.|+|||+.+|+.....    ..|+.+++.+  ++.......      +.  -..+.|+|||+++++
T Consensus       223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~v~~~d~~~--~~~~~~~~~------~~--~~~~~~s~dg~~l~v  288 (353)
T 3vgz_A          223 KLLDDGKEHFFINISLDTARQRAFITDSKA----AEVLVVDTRN--GNILAKVAA------PE--SLAVLFNPARNEAYV  288 (353)
T ss_dssp             ECCCSSSCCCEEEEEEETTTTEEEEEESSS----SEEEEEETTT--CCEEEEEEC------SS--CCCEEEETTTTEEEE
T ss_pred             EcCCCCCCcccceEEECCCCCEEEEEeCCC----CEEEEEECCC--CcEEEEEEc------CC--CceEEECCCCCEEEE
Confidence            221   111122278999999887766442    4788899876  443222210      11  134889999998766


Q ss_pred             EeecCCCCeEEEEecCCCeEE
Q psy463          430 SCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       430 ~~~~~~~~~i~~~~~~~~~~~  450 (790)
                      +...  ...|.++|..+++..
T Consensus       289 ~~~~--~~~v~~~d~~~~~~~  307 (353)
T 3vgz_A          289 THRQ--AGKVSVIDAKSYKVV  307 (353)
T ss_dssp             EETT--TTEEEEEETTTTEEE
T ss_pred             EECC--CCeEEEEECCCCeEE
Confidence            5432  357889998776543

>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}

Probab=99.23  E-value=2.3e-10  Score=112.05  Aligned_cols=213  Identities=15%  Similarity=0.092  Sum_probs=126.0

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCe--EEEEEcCCCCCCC---hhh-------hHhhhhcc--CCc--cchh
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI--VVAYIDGRNSALK---GNT-------LKYAGYRR--LGT--VEIY  565 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~--~v~~~d~rG~~~~---g~~-------~~~~~~~~--~~~--~~~~  565 (790)
                      +.||++||..++   ...|.  .....+++.|+  .|+.+|.++.|..   |..       +....+..  -+.  ...+
T Consensus         7 ~pvvliHG~~~~---~~~~~--~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~   81 (249)
T 3fle_A            7 TATLFLHGYGGS---ERSET--FMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAY   81 (249)
T ss_dssp             EEEEEECCTTCC---GGGTH--HHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHH
T ss_pred             CcEEEECCCCCC---hhHHH--HHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHH
Confidence            567889998776   33444  34445555786  5788877655421   100       00000000  001  1245


Q ss_pred             HHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC----CceEEEEEeCCCCCcccccccchhhhcCCCCccC
Q psy463          566 DQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS----NVFKCGISVAPVTDWIYYDTIYSERYMGLPTFED  641 (790)
Q Consensus       566 D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~----~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~  641 (790)
                      ++.++++.+.++++   ..++.++||||||.+++.++.++|.    ..++.+|.+++..+....        +..+   .
T Consensus        82 ~l~~~i~~l~~~~~---~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~--------~~~~---~  147 (249)
T 3fle_A           82 WIKEVLSQLKSQFG---IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILN--------MNEN---V  147 (249)
T ss_dssp             HHHHHHHHHHHTTC---CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTT--------TSSC---T
T ss_pred             HHHHHHHHHHHHhC---CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCccc--------ccCC---c
Confidence            66677777776333   4789999999999999999998874    368888887765443210        0000   0


Q ss_pred             chhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhh
Q psy463          642 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVD  721 (790)
Q Consensus       642 ~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  721 (790)
                      +...+..                  .|     .|.... ..++.|...                           ...+.
T Consensus       148 ~~~~~~~------------------~g-----~p~~~~-~~~~~l~~~---------------------------~~~~p  176 (249)
T 3fle_A          148 NEIIVDK------------------QG-----KPSRMN-AAYRQLLSL---------------------------YKIYC  176 (249)
T ss_dssp             TTSCBCT------------------TC-----CBSSCC-HHHHHTGGG---------------------------HHHHT
T ss_pred             chhhhcc------------------cC-----CCcccC-HHHHHHHHH---------------------------HhhCC
Confidence            0000000                  00     000000 011111100                           02233


Q ss_pred             ccCCccEEEEecC------CCcccchhhhHHHHHHHHhcCCceEEEEcCC--CCCcCCCcchHHHHHHHHHH
Q psy463          722 RIRDKQYLLVHGT------MDDNVHFQQSMMLAKSLQHADIMFQSQTYPD--EEHGLIGVRPHFYHTLERFL  785 (790)
Q Consensus       722 ~i~~~P~Lii~G~------~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~--~~H~~~~~~~~~~~~i~~fl  785 (790)
                      +. ++|+|.|+|+      .|..||...++.+...++......+.+.++|  +.|.......++.+.|.+||
T Consensus       177 ~~-~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~~V~~~I~~FL  247 (249)
T 3fle_A          177 GK-EIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENKDVANEIIQFL  247 (249)
T ss_dssp             TT-TCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCHHHHHHHHHHH
T ss_pred             cc-CCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCHHHHHHHHHHh
Confidence            34 7899999998      6999999999988888877766667777766  88988876779999999997

>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*

Probab=99.23  E-value=4.6e-11  Score=121.06  Aligned_cols=70  Identities=13%  Similarity=0.051  Sum_probs=56.2

Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCC--ceEEEEcCCCCCcCCC-cc-------------------h
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI--MFQSQTYPDEEHGLIG-VR-------------------P  775 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~--~~~~~~~p~~~H~~~~-~~-------------------~  775 (790)
                      ..+++++..|+||+||++|.+||+++++++++.|++.+.  +++++.+++++|.+.. ..                   -
T Consensus        83 ~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~  162 (318)
T 2d81_A           83 ASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNY  162 (318)
T ss_dssp             CCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSS
T ss_pred             ChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCC
Confidence            344555357999999999999999999999999998883  6899999999998754 21                   3


Q ss_pred             HHHHHHHHHHHH
Q psy463          776 HFYHTLERFLDS  787 (790)
Q Consensus       776 ~~~~~i~~fl~~  787 (790)
                      .....|++||..
T Consensus       163 d~~~~i~~ff~g  174 (318)
T 2d81_A          163 DGAGAALKWIYG  174 (318)
T ss_dssp             CHHHHHHHHHHS
T ss_pred             hHHHHHHHHHhc
Confidence            455778888854

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.20  E-value=1.2e-08  Score=106.31  Aligned_cols=266  Identities=9%  Similarity=0.012  Sum_probs=137.5

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ....+.|||||++|+++...++...+|.+...++....+    ....... ....+.|++++..+.......+.  +.++
T Consensus        39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~--i~~~  111 (343)
T 1ri6_A           39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA----AESALPG-SLTHISTDHQGQFVFVGSYNAGN--VSVT  111 (343)
T ss_dssp             CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE----EEEECSS-CCSEEEECTTSSEEEEEETTTTE--EEEE
T ss_pred             CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeec----cccccCC-CCcEEEEcCCCCEEEEEecCCCe--EEEE
Confidence            456788999999998887766777777776545531100    0111111 23445688887766555543332  3333


Q ss_pred             eCCCCee-eEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCC-cCCccCCc--ceec
Q psy463           89 SINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD-QAGIKDKV--PVPL  164 (790)
Q Consensus        89 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~-~~~~~~~~--~~~l  164 (790)
                      +...+.. ..+.......    ......|+|||+.|+.....++            .|+++++.+ ++... ..  ....
T Consensus       112 d~~~~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~~~------------~v~~~d~~~~~~~~~-~~~~~~~~  174 (343)
T 1ri6_A          112 RLEDGLPVGVVDVVEGLD----GCHSANISPDNRTLWVPALKQD------------RICLFTVSDDGHLVA-QDPAEVTT  174 (343)
T ss_dssp             EEETTEEEEEEEEECCCT----TBCCCEECTTSSEEEEEEGGGT------------EEEEEEECTTSCEEE-EEEEEEEC
T ss_pred             ECCCCccccccccccCCC----CceEEEECCCCCEEEEecCCCC------------EEEEEEecCCCceee-eccccccc
Confidence            3322221 1221111111    1234689999998876553332            799999876 42000 00  0011


Q ss_pred             cccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCC--cccccCcCCccccccccceeehhhcccCC
Q psy463          165 TRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDD--QAGIKDKVPVPLTRGRFTVTEILAWDEKE  242 (790)
Q Consensus       165 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~lt~~~~~~~~~~~~~~~~  242 (790)
                      ..+ ..+ .-+.|+++++  .+|+...          ....|.+++++.  ++.........+.              ..
T Consensus       175 ~~~-~~~-~~~~~~pdg~--~l~~~~~----------~~~~i~~~~~~~~~g~~~~~~~~~~~~--------------~~  226 (343)
T 1ri6_A          175 VEG-AGP-RHMVFHPNEQ--YAYCVNE----------LNSSVDVWELKDPHGNIECVQTLDMMP--------------EN  226 (343)
T ss_dssp             STT-CCE-EEEEECTTSS--EEEEEET----------TTTEEEEEESSCTTSCCEEEEEEECSC--------------TT
T ss_pred             CCC-CCc-ceEEECCCCC--EEEEEeC----------CCCEEEEEEecCCCCcEEEEeeccccC--------------cc
Confidence            111 112 2256777765  3444331          115677777743  3211000000000              00


Q ss_pred             CCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECC--CCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccc
Q psy463          243 NNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSIN--EGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQE  320 (790)
Q Consensus       243 ~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~--~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~  320 (790)
                      .........+.|+|||+.++.+.+..+.  |.++++.  ++..+.+.......    ....+.|+|||+.|++ ..   .
T Consensus       227 ~~~~~~~~~i~~s~dg~~l~v~~~~~~~--i~v~d~~~~~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~-~~---~  296 (343)
T 1ri6_A          227 FSDTRWAADIHITPDGRHLYACDRTASL--ITVFSVSEDGSVLSKEGFQPTET----QPRGFNVDHSGKYLIA-AG---Q  296 (343)
T ss_dssp             CCSCCCEEEEEECTTSSEEEEEETTTTE--EEEEEECTTSCCEEEEEEEECSS----SCCCEEECTTSSEEEE-EC---T
T ss_pred             ccccCCccceEECCCCCEEEEEecCCCE--EEEEEEcCCCCceEEeeeecCCC----ccceEEECCCCCEEEE-ec---C
Confidence            0112345679999999976666654433  6666655  56555554433211    1347899999998874 43   2


Q ss_pred             cCCCCCcCcccEEEEEEcCCCC
Q psy463          321 SDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       321 ~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                      .++      .-.+|.+|.++++
T Consensus       297 ~~~------~v~v~~~d~~~g~  312 (343)
T 1ri6_A          297 KSH------HISVYEIVGEQGL  312 (343)
T ss_dssp             TTC------EEEEEEEETTTTE
T ss_pred             CCC------eEEEEEEcCCCce
Confidence            345      4456666776665

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.19  E-value=1.2e-08  Score=106.31  Aligned_cols=165  Identities=10%  Similarity=0.099  Sum_probs=104.4

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|.+.|+.+++.     ...+.                 .....+..+.|+|||++++....+.   .|.++|+.++.+
T Consensus       164 ~~i~~wd~~~~~~-----~~~~~-----------------~h~~~v~~~~~~~~~~~l~sg~~d~---~v~~wd~~~~~~  218 (340)
T 1got_B          164 TTCALWDIETGQQ-----TTTFT-----------------GHTGDVMSLSLAPDTRLFVSGACDA---SAKLWDVREGMC  218 (340)
T ss_dssp             SCEEEEETTTTEE-----EEEEC-----------------CCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTCSE
T ss_pred             CcEEEEECCCCcE-----EEEEc-----------------CCCCceEEEEECCCCCEEEEEeCCC---cEEEEECCCCee
Confidence            5677888877652     12222                 4456688999999999665554332   288899988876


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCC--eEEeE
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR--FTVTE  361 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~--~~~~~  361 (790)
                      ...+...  .   .......|+|||+.|+ +.+    .+|        .|.++|+.+++     ....+....  ..+..
T Consensus       219 ~~~~~~h--~---~~v~~v~~~p~~~~l~-s~s----~d~--------~v~iwd~~~~~-----~~~~~~~~~~~~~v~~  275 (340)
T 1got_B          219 RQTFTGH--E---SDINAICFFPNGNAFA-TGS----DDA--------TCRLFDLRADQ-----ELMTYSHDNIICGITS  275 (340)
T ss_dssp             EEEECCC--S---SCEEEEEECTTSSEEE-EEE----TTS--------CEEEEETTTTE-----EEEEECCTTCCSCEEE
T ss_pred             EEEEcCC--c---CCEEEEEEcCCCCEEE-EEc----CCC--------cEEEEECCCCc-----EEEEEccCCcccceEE
Confidence            5444321  1   1134789999999887 565    456        58888987765     122222211  23443


Q ss_pred             EEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          362 ILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       362 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                       ++|+|+|+.|+..+.+     ..|...++..  ++. ..+.       +....+..+.|+|||++++...
T Consensus       276 -~~~s~~g~~l~~g~~d-----~~i~vwd~~~--~~~~~~~~-------~h~~~v~~~~~s~dg~~l~s~s  331 (340)
T 1got_B          276 -VSFSKSGRLLLAGYDD-----FNCNVWDALK--ADRAGVLA-------GHDNRVSCLGVTDDGMAVATGS  331 (340)
T ss_dssp             -EEECTTSSEEEEEETT-----SEEEEEETTT--CCEEEEEE-------CCSSCEEEEEECTTSSCEEEEE
T ss_pred             -EEECCCCCEEEEECCC-----CeEEEEEccc--CcEeeEee-------cCCCcEEEEEEcCCCCEEEEEc
Confidence             7899999977776655     3556666654  222 2222       2456788899999999876543

>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A

Probab=99.19  E-value=1.1e-11  Score=122.72  Aligned_cols=87  Identities=14%  Similarity=0.037  Sum_probs=58.4

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|.||++||.+++.   ..|.  .....++ .+|.|+++|++|+|.+...            ...|+.+.++.+.+..+
T Consensus        12 ~~~~lv~lhg~g~~~---~~~~--~~~~~L~-~~~~vi~~Dl~GhG~S~~~------------~~~~~~~~~~~~~~~l~   73 (242)
T 2k2q_B           12 EKTQLICFPFAGGYS---ASFR--PLHAFLQ-GECEMLAAEPPGHGTNQTS------------AIEDLEELTDLYKQELN   73 (242)
T ss_dssp             CCCEEESSCCCCHHH---HHHH--HHHHHHC-CSCCCEEEECCSSCCSCCC------------TTTHHHHHHHHTTTTCC
T ss_pred             CCceEEEECCCCCCH---HHHH--HHHHhCC-CCeEEEEEeCCCCCCCCCC------------CcCCHHHHHHHHHHHHH
Confidence            346789999987762   2232  2223444 5799999999998765321            24566666665554333


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALAL  604 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~  604 (790)
                      .....++.++||||||.+|+.+|.+
T Consensus        74 ~~~~~~~~lvGhSmGG~iA~~~A~~   98 (242)
T 2k2q_B           74 LRPDRPFVLFGHSMGGMITFRLAQK   98 (242)
T ss_dssp             CCCCSSCEEECCSSCCHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCHhHHHHHHHHHH
Confidence            2123689999999999999999876

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.19  E-value=2e-08  Score=111.51  Aligned_cols=352  Identities=10%  Similarity=0.028  Sum_probs=187.0

Q ss_pred             eeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC-
Q psy463           12 ALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI-   90 (790)
Q Consensus        12 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~-   90 (790)
                      ...+||||+.  |++... ...+.++....++      ....+..... ...+.+++|++.++-.++.   -.+.+++. 
T Consensus       142 ~~~~~p~~~~--~vs~~~-d~~V~v~D~~t~~------~~~~i~~g~~-~~~v~~spdg~~l~v~~~d---~~V~v~D~~  208 (543)
T 1nir_A          142 LNDLDLPNLF--SVTLRD-AGQIALVDGDSKK------IVKVIDTGYA-VHISRMSASGRYLLVIGRD---ARIDMIDLW  208 (543)
T ss_dssp             CSCCCGGGEE--EEEEGG-GTEEEEEETTTCC------EEEEEECSTT-EEEEEECTTSCEEEEEETT---SEEEEEETT
T ss_pred             ccccCCCCEE--EEEEcC-CCeEEEEECCCce------EEEEEecCcc-cceEEECCCCCEEEEECCC---CeEEEEECc
Confidence            4458999853  344332 2234444444332      1111111111 3345677888877666665   44667777 


Q ss_pred             -CCCeeeEEEeecCCCCccccCCcccccc----CCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecc
Q psy463           91 -NEGTCDVVFSRDLDRGWFEPFDHLRFSS----DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  165 (790)
Q Consensus        91 -~~~~~~~~~~~~~~~~~~~~~~~~~~sp----dg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt  165 (790)
                       .++++...+..   ...   ....+|||    ||++++..+..+.            .|.++|..+++     ....+.
T Consensus       209 ~~t~~~~~~i~~---g~~---p~~va~sp~~~~dg~~l~v~~~~~~------------~v~v~D~~t~~-----~~~~i~  265 (543)
T 1nir_A          209 AKEPTKVAEIKI---GIE---ARSVESSKFKGYEDRYTIAGAYWPP------------QFAIMDGETLE-----PKQIVS  265 (543)
T ss_dssp             SSSCEEEEEEEC---CSE---EEEEEECCSTTCTTTEEEEEEEESS------------EEEEEETTTCC-----EEEEEE
T ss_pred             CCCCcEEEEEec---CCC---cceEEeCCCcCCCCCEEEEEEccCC------------eEEEEeccccc-----cceeec
Confidence             66665443321   111   13458999    9999887664333            78888987764     222222


Q ss_pred             ccc----------e-EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceee
Q psy463          166 RGR----------F-TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTE  234 (790)
Q Consensus       166 ~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~  234 (790)
                      ...          . .+.. ..++++++  .++++...          ...|+++|+.+++..++   ..+.        
T Consensus       266 ~~g~~~~~~~~~~~~~v~~-i~~s~~~~--~~~vs~~~----------~g~i~vvd~~~~~~l~~---~~i~--------  321 (543)
T 1nir_A          266 TRGMTVDTQTYHPEPRVAA-IIASHEHP--EFIVNVKE----------TGKVLLVNYKDIDNLTV---TSIG--------  321 (543)
T ss_dssp             CCEECSSSCCEESCCCEEE-EEECSSSS--EEEEEETT----------TTEEEEEECTTSSSCEE---EEEE--------
T ss_pred             ccCcccCccccccCCceEE-EEECCCCC--EEEEEECC----------CCeEEEEEecCCCccee---EEec--------
Confidence            110          0 1111 23344444  44444321          26899999887542110   0111        


Q ss_pred             hhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee-EccCCCEEEE
Q psy463          235 ILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR-FSSDGKKMLL  313 (790)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~-~spDg~~i~~  313 (790)
                                .......+.|+|||++++..+...+  .|.++|++++++........ ...  +..... ++||+..++.
T Consensus       322 ----------~~~~~~~~~~spdg~~l~va~~~~~--~v~v~D~~tg~l~~~i~~g~-~ph--~g~g~~~~~p~~g~~~~  386 (543)
T 1nir_A          322 ----------AAPFLHDGGWDSSHRYFMTAANNSN--KVAVIDSKDRRLSALVDVGK-TPH--PGRGANFVHPKYGPVWS  386 (543)
T ss_dssp             ----------CCSSCCCEEECTTSCEEEEEEGGGT--EEEEEETTTTEEEEEEECSS-SBC--CTTCEEEEETTTEEEEE
T ss_pred             ----------cCcCccCceECCCCCEEEEEecCCC--eEEEEECCCCeEEEeeccCC-CCC--CCCCcccCCCCCccEEE
Confidence                      1122346789999996666554333  38889999998766554211 100  011233 4788776663


Q ss_pred             EEccccccCCCCCcCcccEEEEEEcCCCCcc-cCC-CcccccCCCeEEeEEEeeecCCCEEEEEEcCCCC---ceEEEEE
Q psy463          314 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGI-KDK-VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSP---IVQHMYR  388 (790)
Q Consensus       314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~-~~~-~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~---~~~~l~~  388 (790)
                      +..     .+      ...|.++|.++.+.- ... ..+.|....... ..+.++|||+.||..+.. +|   ....|.+
T Consensus       387 s~~-----~~------d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~-~~v~~~pdg~~l~v~~~~-~~~~~~~~~v~v  453 (543)
T 1nir_A          387 TSH-----LG------DGSISLIGTDPKNHPQYAWKKVAELQGQGGGS-LFIKTHPKSSHLYVDTTF-NPDARISQSVAV  453 (543)
T ss_dssp             EEB-----SS------SSEEEEEECCTTTCTTTBTSEEEEEECSCSCC-CCEECCTTCCEEEECCTT-CSSHHHHTCEEE
T ss_pred             ecc-----CC------CceEEEEEeCCCCCchhcCeEEEEEEcCCCCc-eEEEcCCCCCcEEEecCC-CCCcccCceEEE
Confidence            332     22      236888998762100 000 123333221111 236789999988876532 11   1247888


Q ss_pred             EEcCCCCCCcceeeec-ccccCCCcccEEEEEEecCCcEEEEEee-cCC-CCeEEEEecCCCeEEE
Q psy463          389 INIADPTATPECITCD-LLTSANQKCSYSGATFSTNVSYYVLSCI-GPG-IPEIMLFDKTGQRLLY  451 (790)
Q Consensus       389 ~~~~~~~~~~~~lt~~-~~~~~~~~~~~~~~~~s~dg~~~~~~~~-~~~-~~~i~~~~~~~~~~~~  451 (790)
                      +++++.....+.|.-. ...+.++......+.|+|||++++++.- +.. ...|.++|.++.+...
T Consensus       454 ~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~  519 (543)
T 1nir_A          454 FDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKA  519 (543)
T ss_dssp             EETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred             EECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEE
Confidence            8887621111222100 0001123456778999999999998864 323 5789999998876653

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.19  E-value=1.7e-08  Score=109.13  Aligned_cols=252  Identities=13%  Similarity=0.119  Sum_probs=149.6

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecc----ccceEEEEEEeeeccCCccEEEE
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT----RGRFTVTEILAWDERENNPLLIL  188 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt----~~~~~~~~~~~~~~~~~~~~~~~  188 (790)
                      ..+|+| ++.+++....++            .|+++++.+++     ....+.    .+......-..|++++.   +++
T Consensus       127 ~~~~s~-~~~~~~~~~~~~------------~i~~~d~~~g~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~  185 (433)
T 3bws_A          127 SVRFID-NTRLAIPLLEDE------------GMDVLDINSGQ-----TVRLSPPEKYKKKLGFVETISIPEHNE---LWV  185 (433)
T ss_dssp             CCEESS-SSEEEEEBTTSS------------SEEEEETTTCC-----EEEECCCHHHHTTCCEEEEEEEGGGTE---EEE
T ss_pred             EEEEeC-CCeEEEEeCCCC------------eEEEEECCCCe-----EeeecCcccccccCCceeEEEEcCCCE---EEE
Confidence            468999 666666553322            69999998774     122111    11122233345655443   333


Q ss_pred             ecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccC
Q psy463          189 SHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQ  268 (790)
Q Consensus       189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~  268 (790)
                      +..          ....|+++++++++..     ..+.                 ........+.|+|||+.++.+....
T Consensus       186 s~~----------~d~~v~~~d~~~~~~~-----~~~~-----------------~~~~~~~~~~~~~~~~~l~~~~~~~  233 (433)
T 3bws_A          186 SQM----------QANAVHVFDLKTLAYK-----ATVD-----------------LTGKWSKILLYDPIRDLVYCSNWIS  233 (433)
T ss_dssp             EEG----------GGTEEEEEETTTCCEE-----EEEE-----------------CSSSSEEEEEEETTTTEEEEEETTT
T ss_pred             EEC----------CCCEEEEEECCCceEE-----EEEc-----------------CCCCCeeEEEEcCCCCEEEEEecCC
Confidence            332          1258899998876531     1221                 2344567899999999665554322


Q ss_pred             cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCC
Q psy463          269 NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV  348 (790)
Q Consensus       269 ~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~  348 (790)
                        ..|+++|+.+++........  .    ......|+|||+.|++...    ..+. .......|+++|+.+++      
T Consensus       234 --~~i~~~d~~~~~~~~~~~~~--~----~~~~~~~~~~g~~l~~~~~----~~~~-~~~~dg~i~~~d~~~~~------  294 (433)
T 3bws_A          234 --EDISVIDRKTKLEIRKTDKI--G----LPRGLLLSKDGKELYIAQF----SASN-QESGGGRLGIYSMDKEK------  294 (433)
T ss_dssp             --TEEEEEETTTTEEEEECCCC--S----EEEEEEECTTSSEEEEEEE----ESCT-TCSCCEEEEEEETTTTE------
T ss_pred             --CcEEEEECCCCcEEEEecCC--C----CceEEEEcCCCCEEEEEEC----CCCc-cccCCCeEEEEECCCCc------
Confidence              24999999888765443221  1    1347899999998874332    1110 00002379999998776      


Q ss_pred             cccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEE
Q psy463          349 PVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYV  428 (790)
Q Consensus       349 ~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~  428 (790)
                      ..........+.. +.|+||++.+++.....    ..|+.+++.+  ++......       .......+.|+|||++++
T Consensus       295 ~~~~~~~~~~~~~-~~~~~~g~~l~~~~~~~----~~v~v~d~~~--~~~~~~~~-------~~~~~~~~~~s~dg~~l~  360 (433)
T 3bws_A          295 LIDTIGPPGNKRH-IVSGNTENKIYVSDMCC----SKIEVYDLKE--KKVQKSIP-------VFDKPNTIALSPDGKYLY  360 (433)
T ss_dssp             EEEEEEEEECEEE-EEECSSTTEEEEEETTT----TEEEEEETTT--TEEEEEEE-------CSSSEEEEEECTTSSEEE
T ss_pred             EEeeccCCCCcce-EEECCCCCEEEEEecCC----CEEEEEECCC--CcEEEEec-------CCCCCCeEEEcCCCCEEE
Confidence            4333222222333 78999999888886553    3677788765  43322222       234567899999999888


Q ss_pred             EEeecCCC------------CeEEEEecCCCeEE
Q psy463          429 LSCIGPGI------------PEIMLFDKTGQRLL  450 (790)
Q Consensus       429 ~~~~~~~~------------~~i~~~~~~~~~~~  450 (790)
                      ......+.            ..|+++|+.+++..
T Consensus       361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~  394 (433)
T 3bws_A          361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK  394 (433)
T ss_dssp             EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred             EEecCCCccccccccccccceEEEEEECCCCcEE
Confidence            87665442            38999988765543

>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}

Probab=99.17  E-value=2e-10  Score=115.11  Aligned_cols=101  Identities=12%  Similarity=-0.006  Sum_probs=64.0

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ...|.||++||++++.   ..|.. +..  ++ .+|.|+.+|++|.+... .         ....+.++.+.+..++...
T Consensus        19 ~~~~~lv~lhg~~~~~---~~~~~-~~~--l~-~~~~v~~~d~~G~~~~~-~---------~~~~~~~~~~~~~~~i~~~   81 (265)
T 3ils_A           19 VARKTLFMLPDGGGSA---FSYAS-LPR--LK-SDTAVVGLNCPYARDPE-N---------MNCTHGAMIESFCNEIRRR   81 (265)
T ss_dssp             TSSEEEEEECCTTCCG---GGGTT-SCC--CS-SSEEEEEEECTTTTCGG-G---------CCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCH---HHHHH-HHh--cC-CCCEEEEEECCCCCCCC-C---------CCCCHHHHHHHHHHHHHHh
Confidence            3457889999998863   23332 223  33 68999999999963211 1         0123444444333333312


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHh---cCCCCceEEEEEeCCC
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALA---LDPSNVFKCGISVAPV  619 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~---~~p~~~~~~~v~~~~~  619 (790)
                      .  ...++.++||||||.++..++.   .++. .++.++..++.
T Consensus        82 ~--~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~-~v~~lvl~~~~  122 (265)
T 3ils_A           82 Q--PRGPYHLGGWSSGGAFAYVVAEALVNQGE-EVHSLIIIDAP  122 (265)
T ss_dssp             C--SSCCEEEEEETHHHHHHHHHHHHHHHTTC-CEEEEEEESCC
T ss_pred             C--CCCCEEEEEECHhHHHHHHHHHHHHhCCC-CceEEEEEcCC
Confidence            1  2358999999999999999887   5554 67777777654

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.16  E-value=2.2e-08  Score=104.66  Aligned_cols=176  Identities=11%  Similarity=0.145  Sum_probs=92.9

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .....+..+.|+|||++++....+..   |.+++..++....+....+...   ......|+|||+.|+ +.+    .+|
T Consensus       148 ~h~~~v~~~~~~p~~~~l~s~s~d~~---i~~w~~~~~~~~~~~~~~~h~~---~v~~l~~sp~g~~l~-s~s----~D~  216 (345)
T 3fm0_A          148 SHTQDVKHVVWHPSQELLASASYDDT---VKLYREEEDDWVCCATLEGHES---TVWSLAFDPSGQRLA-SCS----DDR  216 (345)
T ss_dssp             CCCSCEEEEEECSSSSCEEEEETTSC---EEEEEEETTEEEEEEEECCCSS---CEEEEEECTTSSEEE-EEE----TTS
T ss_pred             CcCCCeEEEEECCCCCEEEEEeCCCc---EEEEEecCCCEEEEEEecCCCC---ceEEEEECCCCCEEE-EEe----CCC
Confidence            34456788999999995555444322   6677776665443333322222   234789999999887 565    456


Q ss_pred             CCCcCcccEEEEEEcC--CCCcccC-----C---CcccccC-CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463          324 STPVDSWDHLTFIDLD--DQAGIKD-----K---VPVPLTR-GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA  392 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~--~~~~~~~-----~---~~~~lt~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~  392 (790)
                              .|.+++..  +......     .   ....+.. ....+.. ++|+|++..|+..+.++.   .++|..+..
T Consensus       217 --------~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-v~~~~~~~~l~s~~~d~~---i~vw~~~~~  284 (345)
T 3fm0_A          217 --------TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYD-IAWCQLTGALATACGDDA---IRVFQEDPN  284 (345)
T ss_dssp             --------CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEE-EEECTTTCCEEEEETTSC---EEEEEECTT
T ss_pred             --------eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEE-EEEecCCCEEEEEeCCCe---EEEEEeCCC
Confidence                    35555532  2110000     0   0001111 1222333 789999998877776644   667766543


Q ss_pred             CCCCCcc-eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          393 DPTATPE-CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       393 ~~~~~~~-~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .....+. .+....  ..+....+..+.|+|++..++++.+..+  .|.+.++..
T Consensus       285 ~~~~~~~~~~~~~~--~~~h~~~V~~v~~~p~~~~~laS~s~Dg--~v~~W~~~~  335 (345)
T 3fm0_A          285 SDPQQPTFSLTAHL--HQAHSQDVNCVAWNPKEPGLLASCSDDG--EVAFWKYQR  335 (345)
T ss_dssp             SCTTSCCEEEEEEE--TTSSSSCEEEEEECSSSTTEEEEEETTS--CEEEEEECC
T ss_pred             CCcceeeEEEEeee--cccccCcEeEeEEeCCCceEEEEcCCCC--cEEEEEecC
Confidence            2101111 111100  1124557888999999864444544333  466666554

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.15  E-value=9.6e-09  Score=107.04  Aligned_cols=175  Identities=8%  Similarity=-0.011  Sum_probs=93.1

Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCC-CceeEEE--EEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINE-GTCDVVF--SRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~-g~~~~l~--~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      .+.|+|||+.++......+  .|+++++.+ ++...+.  ......+  .....+.|+|||+.+++...    .++    
T Consensus       133 ~~~~s~dg~~l~~~~~~~~--~v~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~pdg~~l~~~~~----~~~----  200 (343)
T 1ri6_A          133 SANISPDNRTLWVPALKQD--RICLFTVSDDGHLVAQDPAEVTTVEG--AGPRHMVFHPNEQYAYCVNE----LNS----  200 (343)
T ss_dssp             CCEECTTSSEEEEEEGGGT--EEEEEEECTTSCEEEEEEEEEECSTT--CCEEEEEECTTSSEEEEEET----TTT----
T ss_pred             EEEECCCCCEEEEecCCCC--EEEEEEecCCCceeeecccccccCCC--CCcceEEECCCCCEEEEEeC----CCC----
Confidence            4679999996666653322  388888876 6655433  2111111  01235789999998874432    334    


Q ss_pred             CcccEEEEEEcCC--CCcccCCCcccccCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          328 DSWDHLTFIDLDD--QAGIKDKVPVPLTRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       328 ~~~~~l~~~d~~~--~~~~~~~~~~~lt~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                          .|.+++++.  ++.........+..+   ..... .++|+|||+.|++.....    ..|.++++....++.+.+.
T Consensus       201 ----~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~i~~s~dg~~l~v~~~~~----~~i~v~d~~~~~~~~~~~~  271 (343)
T 1ri6_A          201 ----SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAA-DIHITPDGRHLYACDRTA----SLITVFSVSEDGSVLSKEG  271 (343)
T ss_dssp             ----EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEE-EEEECTTSSEEEEEETTT----TEEEEEEECTTSCCEEEEE
T ss_pred             ----EEEEEEecCCCCcEEEEeeccccCccccccCCcc-ceEECCCCCEEEEEecCC----CEEEEEEEcCCCCceEEee
Confidence                688888743  330000000011111   11122 378999999887766432    2455555542113333332


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEE
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLY  451 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~  451 (790)
                      .. .    .......+.|+|||+++++.....+.-.+|.++.++++.+.
T Consensus       272 ~~-~----~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~  315 (343)
T 1ri6_A          272 FQ-P----TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHE  315 (343)
T ss_dssp             EE-E----CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEE
T ss_pred             ee-c----CCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeE
Confidence            21 0    11225568999999988776544443334445666665543

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.15  E-value=9e-09  Score=121.41  Aligned_cols=315  Identities=11%  Similarity=0.056  Sum_probs=176.8

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEE
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITR   87 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~   87 (790)
                      +...+++|||||++||..+ .++...+|.+..  +.      .......+...+..+.|++++..+.-...   .-.+.+
T Consensus        14 ~~v~~i~~sp~~~~la~~~-~~g~v~iwd~~~--~~------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~v   81 (814)
T 3mkq_A           14 DRVKGIDFHPTEPWVLTTL-YSGRVEIWNYET--QV------EVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRIRV   81 (814)
T ss_dssp             SCEEEEEECSSSSEEEEEE-TTSEEEEEETTT--TE------EEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEEEE
T ss_pred             CceEEEEECCCCCEEEEEe-CCCEEEEEECCC--Cc------eEEEEecCCCcEEEEEEeCCCCEEEEEeC---CCeEEE
Confidence            4457889999999999876 456666665433  31      11122223333455678777665443332   235677


Q ss_pred             eeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecccc
Q psy463           88 CSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG  167 (790)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~  167 (790)
                      ++..++++...+......     .....|+|||+.|+..+. +            +.|.++++.++.    .....+...
T Consensus        82 w~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~~-d------------g~i~vw~~~~~~----~~~~~~~~~  139 (814)
T 3mkq_A           82 FNYNTGEKVVDFEAHPDY-----IRSIAVHPTKPYVLSGSD-D------------LTVKLWNWENNW----ALEQTFEGH  139 (814)
T ss_dssp             EETTTCCEEEEEECCSSC-----EEEEEECSSSSEEEEEET-T------------SEEEEEEGGGTS----EEEEEEECC
T ss_pred             EECCCCcEEEEEecCCCC-----EEEEEEeCCCCEEEEEcC-C------------CEEEEEECCCCc----eEEEEEcCC
Confidence            888777665544432211     134689999998875442 2            278888887652    122333333


Q ss_pred             ceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCC
Q psy463          168 RFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEP  247 (790)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~  247 (790)
                      ...+.. ..|++.++..++..+.            ...|.++++.+++.     ...+.                .....
T Consensus       140 ~~~v~~-~~~~p~~~~~l~~~~~------------dg~v~vwd~~~~~~-----~~~~~----------------~~~~~  185 (814)
T 3mkq_A          140 EHFVMC-VAFNPKDPSTFASGCL------------DRTVKVWSLGQSTP-----NFTLT----------------TGQER  185 (814)
T ss_dssp             SSCEEE-EEEETTEEEEEEEEET------------TSEEEEEETTCSSC-----SEEEE----------------CCCTT
T ss_pred             CCcEEE-EEEEcCCCCEEEEEeC------------CCeEEEEECCCCcc-----eeEEe----------------cCCCC
Confidence            333333 4666633321222221            15788888876542     11221                02224


Q ss_pred             EEEEEEEcc--CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          248 VLSRVNWAN--ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       248 ~~~~~~wsp--Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      .+..+.|+|  ||++++....+.   .|.+++..++++.......  .   .......|+|||+.|+ +.+    .+|  
T Consensus       186 ~v~~~~~~~~~~~~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~l~-~~~----~dg--  250 (814)
T 3mkq_A          186 GVNYVDYYPLPDKPYMITASDDL---TIKIWDYQTKSCVATLEGH--M---SNVSFAVFHPTLPIII-SGS----EDG--  250 (814)
T ss_dssp             CCCEEEECCSTTCCEEEEECTTS---EEEEEETTTTEEEEEEECC--S---SCEEEEEECSSSSEEE-EEE----TTS--
T ss_pred             CEEEEEEEECCCCCEEEEEeCCC---EEEEEECCCCcEEEEEcCC--C---CCEEEEEEcCCCCEEE-EEe----CCC--
Confidence            566889999  888665554432   4889999888765444321  1   1144789999999776 554    456  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL  405 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~  405 (790)
                            .|.++|+.+++     ....+..+...+.. ++|+|+|+.+++.+...    ..+..+++..  ..        
T Consensus       251 ------~v~vwd~~~~~-----~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~--------  304 (814)
T 3mkq_A          251 ------TLKIWNSSTYK-----VEKTLNVGLERSWC-IATHPTGRKNYIASGFD----NGFTVLSLGN--DE--------  304 (814)
T ss_dssp             ------CEEEEETTTCS-----EEEEECCSSSSEEE-EEECTTCGGGEEEEEET----TEEEEEECSC--CS--------
T ss_pred             ------eEEEEECCCCc-----EEEEeecCCCcEEE-EEEccCCCceEEEEEeC----CCEEEEEcCC--CC--------
Confidence                  58889988766     13334443334444 88999998653333322    2344555543  11        


Q ss_pred             cccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEE
Q psy463          406 LTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIML  441 (790)
Q Consensus       406 ~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~  441 (790)
                                ....++|+|+.++..........++.
T Consensus       305 ----------~~~~~~~~g~~~~~~~~~~~~~~~~~  330 (814)
T 3mkq_A          305 ----------PTLSLDPVGKLVWSGGKNAAASDIFT  330 (814)
T ss_dssp             ----------CCEEECSSSEEEEECCTTSCTTCEEE
T ss_pred             ----------ceeEECCCCCEEEECcccccceeeee
Confidence                      12567788877655433222334444

>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}

Probab=99.13  E-value=2.6e-10  Score=113.36  Aligned_cols=154  Identities=12%  Similarity=0.026  Sum_probs=97.5

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC----ceEEEEEeCCCCCcccccccchhhhcCCCCc
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN----VFKCGISVAPVTDWIYYDTIYSERYMGLPTF  639 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~----~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~  639 (790)
                      .+++.++++.+.++++   ..++.++||||||.+++.++.++|..    .++.+|+.++..+......     . ..   
T Consensus        77 a~~l~~~i~~l~~~~~---~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~-----~-~~---  144 (254)
T 3ds8_A           77 SKWLKIAMEDLKSRYG---FTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPND-----N-GM---  144 (254)
T ss_dssp             HHHHHHHHHHHHHHHC---CSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHH-----H-CS---
T ss_pred             HHHHHHHHHHHHHHhC---CCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccc-----c-cc---
Confidence            4555555677766444   37999999999999999999998752    6888888887654321000     0 00   


Q ss_pred             cCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhh
Q psy463          640 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNK  719 (790)
Q Consensus       640 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  719 (790)
                                       .+..      .+     .+..  ..+++.+.                              ..
T Consensus       145 -----------------~~~~------~~-----~p~~--~~~~~~~~------------------------------~~  164 (254)
T 3ds8_A          145 -----------------DLSF------KK-----LPNS--TPQMDYFI------------------------------KN  164 (254)
T ss_dssp             -----------------CTTC------SS-----CSSC--CHHHHHHH------------------------------HT
T ss_pred             -----------------cccc------cc-----CCcc--hHHHHHHH------------------------------HH
Confidence                             0000      00     0000  00011110                              11


Q ss_pred             hhccC-CccEEEEecC------CCcccchhhhHHHHHHHHhcCCceEEEEcCC--CCCcCCCcchHHHHHHHHHHHHhh
Q psy463          720 VDRIR-DKQYLLVHGT------MDDNVHFQQSMMLAKSLQHADIMFQSQTYPD--EEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       720 ~~~i~-~~P~Lii~G~------~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~--~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      ...++ ++|+|.|+|+      .|..||...++.+...++......+.+.+.+  ++|.......++.+.+..||+++.
T Consensus       165 ~~~~~~~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~v~~~i~~fL~~~~  243 (254)
T 3ds8_A          165 QTEVSPDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPKSIEKTYWFLEKFK  243 (254)
T ss_dssp             GGGSCTTCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHHHHHHHHHHHHTCC
T ss_pred             HhhCCCCcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHHHHHHHHHHHHHhc
Confidence            11221 6899999999      9999999999988877776544455666666  668877655579999999998753

>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}

Probab=99.12  E-value=1e-09  Score=107.48  Aligned_cols=143  Identities=13%  Similarity=0.029  Sum_probs=92.5

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC----CCceEEEEEeCCCCCcccccccchhhhcCCCCc
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP----SNVFKCGISVAPVTDWIYYDTIYSERYMGLPTF  639 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p----~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~  639 (790)
                      ++++.++++.+.++++   ..++.++||||||.++..++..++    ...++.+|.+++..+....          .+  
T Consensus        81 a~~l~~~~~~l~~~~~---~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~----------~~--  145 (250)
T 3lp5_A           81 AVWLNTAFKALVKTYH---FNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMEST----------ST--  145 (250)
T ss_dssp             HHHHHHHHHHHHTTSC---CSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCC----------CS--
T ss_pred             HHHHHHHHHHHHHHcC---CCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccc----------cc--
Confidence            4666777777766333   578999999999999999888762    2367777777664332100          00  


Q ss_pred             cCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhh
Q psy463          640 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNK  719 (790)
Q Consensus       640 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  719 (790)
                      ..                                     ...+++.|....                           ..
T Consensus       146 ~~-------------------------------------~~~~~~~l~~~~---------------------------~~  161 (250)
T 3lp5_A          146 TA-------------------------------------KTSMFKELYRYR---------------------------TG  161 (250)
T ss_dssp             SC-------------------------------------CCHHHHHHHHTG---------------------------GG
T ss_pred             cc-------------------------------------cCHHHHHHHhcc---------------------------cc
Confidence            00                                     001111111100                           11


Q ss_pred             hhccCCccEEEEecC----CCcccchhhhHHHHHHHHhcCCceEEEEcC--CCCCcCCCcchHHHHHHHHHHHH
Q psy463          720 VDRIRDKQYLLVHGT----MDDNVHFQQSMMLAKSLQHADIMFQSQTYP--DEEHGLIGVRPHFYHTLERFLDS  787 (790)
Q Consensus       720 ~~~i~~~P~Lii~G~----~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p--~~~H~~~~~~~~~~~~i~~fl~~  787 (790)
                      +. - ++|+|+|+|+    .|..||...++.+...++......+.+.+.  +++|.......++.+.|.+||.+
T Consensus       162 lp-~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~~v~~~I~~FL~~  233 (250)
T 3lp5_A          162 LP-E-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNKQIVSLIRQYLLA  233 (250)
T ss_dssp             SC-T-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHHHHHHHHHHHTSC
T ss_pred             CC-C-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCHHHHHHHHHHHhc
Confidence            11 1 6899999999    999999999988887777544444445554  46698877445899999999853

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.11  E-value=1.8e-08  Score=108.53  Aligned_cols=241  Identities=13%  Similarity=0.079  Sum_probs=137.2

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      .|+|||+.|+..+. +            +.|.++++.++.     ....+......+. -+.|+++++  +++...    
T Consensus       104 ~~~~~~~~l~~~~~-d------------g~i~iwd~~~~~-----~~~~~~~h~~~v~-~~~~~~~~~--~l~s~s----  158 (420)
T 3vl1_A          104 TAKLQMRRFILGTT-E------------GDIKVLDSNFNL-----QREIDQAHVSEIT-KLKFFPSGE--ALISSS----  158 (420)
T ss_dssp             EECSSSCEEEEEET-T------------SCEEEECTTSCE-----EEEETTSSSSCEE-EEEECTTSS--EEEEEE----
T ss_pred             EEecCCCEEEEEEC-C------------CCEEEEeCCCcc-----eeeecccccCccE-EEEECCCCC--EEEEEe----
Confidence            56889988776542 1            268888877663     2222233333333 346777654  333222    


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT  274 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~  274 (790)
                             ....|.++|+.+++.     ...+.                 .....+..+.|+|||+.++....+.   .|.
T Consensus       159 -------~d~~i~iwd~~~~~~-----~~~~~-----------------~h~~~v~~~~~~~~~~~l~s~~~d~---~v~  206 (420)
T 3vl1_A          159 -------QDMQLKIWSVKDGSN-----PRTLI-----------------GHRATVTDIAIIDRGRNVLSASLDG---TIR  206 (420)
T ss_dssp             -------TTSEEEEEETTTCCC-----CEEEE-----------------CCSSCEEEEEEETTTTEEEEEETTS---CEE
T ss_pred             -------CCCeEEEEeCCCCcC-----ceEEc-----------------CCCCcEEEEEEcCCCCEEEEEcCCC---cEE
Confidence                   115788889887653     23333                 4566788999999999666554433   288


Q ss_pred             EEECCCCceeEEEEEeC-CCcc------------------cccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEE
Q psy463          275 RCSINEGTCDVVFSRDL-DRGW------------------FEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTF  335 (790)
Q Consensus       275 ~~~~~~g~~~~l~~~~~-~~~~------------------~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~  335 (790)
                      ++|+.++++...+.... ....                  ......+.|+|||+.|+ +.+    .+|        .|.+
T Consensus       207 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~----~dg--------~i~i  273 (420)
T 3vl1_A          207 LWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI-AGH----VSG--------VITV  273 (420)
T ss_dssp             EEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEE-EEE----TTS--------CEEE
T ss_pred             EeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEE-EEc----CCC--------eEEE
Confidence            88998887654443210 0000                  01234678999999887 454    456        5889


Q ss_pred             EEcCCCCcccCCCcccccC-CCeEEeEEEeeecCCC-EEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcc
Q psy463          336 IDLDDQAGIKDKVPVPLTR-GRFTVTEILAWDEKEN-NVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKC  413 (790)
Q Consensus       336 ~d~~~~~~~~~~~~~~lt~-~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~  413 (790)
                      +|+.+++     ....+.. ....+.. +.|+|+++ .|+..+.+     ..|+..++.........+...      ...
T Consensus       274 ~d~~~~~-----~~~~~~~~~~~~v~~-~~~~~~~~~~l~~g~~d-----g~i~vwd~~~~~~~~~~~~~~------~~~  336 (420)
T 3vl1_A          274 HNVFSKE-----QTIQLPSKFTCSCNS-LTVDGNNANYIYAGYEN-----GMLAQWDLRSPECPVGEFLIN------EGT  336 (420)
T ss_dssp             EETTTCC-----EEEEECCTTSSCEEE-EEECSSCTTEEEEEETT-----SEEEEEETTCTTSCSEEEEES------TTS
T ss_pred             EECCCCc-----eeEEcccccCCCcee-EEEeCCCCCEEEEEeCC-----CeEEEEEcCCCcCchhhhhcc------CCC
Confidence            9988765     1333332 2333444 88999998 66555544     356677776521112233221      223


Q ss_pred             cEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          414 SYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       414 ~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .+... +++++++++...   .-..+.++++..
T Consensus       337 ~v~~~-~~~~~~~l~s~~---~d~~v~iw~~~~  365 (420)
T 3vl1_A          337 PINNV-YFAAGALFVSSG---FDTSIKLDIISD  365 (420)
T ss_dssp             CEEEE-EEETTEEEEEET---TTEEEEEEEECC
T ss_pred             CceEE-EeCCCCEEEEec---CCccEEEEeccC
Confidence            34444 556777664432   234567776654

>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A

Probab=99.10  E-value=3.1e-10  Score=116.13  Aligned_cols=106  Identities=8%  Similarity=-0.117  Sum_probs=70.0

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHH-HHHH
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTR-YLQE  576 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~  576 (790)
                      ....|.||++||.++... ...|.  .....+. .+|.|+.+|++|.+.+...          ...++++.+.+. .+.+
T Consensus        64 ~~~~~~lvllhG~~~~~~-~~~~~--~~~~~l~-~~~~v~~~d~~G~G~s~~~----------~~~~~~~a~~~~~~l~~  129 (300)
T 1kez_A           64 GPGEVTVICCAGTAAISG-PHEFT--RLAGALR-GIAPVRAVPQPGYEEGEPL----------PSSMAAVAAVQADAVIR  129 (300)
T ss_dssp             CSCSSEEEECCCSSTTCS-TTTTH--HHHHHTS-SSCCBCCCCCTTSSTTCCB----------CSSHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEECCCcccCc-HHHHH--HHHHhcC-CCceEEEecCCCCCCCCCC----------CCCHHHHHHHHHHHHHH
Confidence            345688999999887521 12222  2223343 4799999999997753211          123455544443 4444


Q ss_pred             hCCCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEeCCCC
Q psy463          577 NLPYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISVAPVT  620 (790)
Q Consensus       577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~~~~~  620 (790)
                      ..   +..++.|+||||||.+++.++.++|.  ..++++++.++..
T Consensus       130 ~~---~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~  172 (300)
T 1kez_A          130 TQ---GDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYP  172 (300)
T ss_dssp             HC---SSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCC
T ss_pred             hc---CCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCC
Confidence            23   34789999999999999999998873  4788888887754

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.10  E-value=8.9e-09  Score=127.56  Aligned_cols=240  Identities=13%  Similarity=0.029  Sum_probs=146.2

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+|+|+.++....             .+.|.++++.++.     ....+......+. -..|+++++. ++..+    
T Consensus       967 ~~~sp~g~~l~~g~~-------------~g~i~i~d~~~~~-----~~~~~~~h~~~v~-~l~~s~dg~~-l~s~~---- 1022 (1249)
T 3sfz_A          967 CCLSPHLEYVAFGDE-------------DGAIKIIELPNNR-----VFSSGVGHKKAVR-HIQFTADGKT-LISSS---- 1022 (1249)
T ss_dssp             EEECTTSSEEEEEET-------------TSCCEEEETTTTS-----CEEECCCCSSCCC-CEEECSSSSC-EEEEC----
T ss_pred             EEEcCCCCEEEEEcC-------------CCCEEEEEcCCCc-----eeeecccCCCceE-EEEECCCCCE-EEEEc----
Confidence            589999998876542             1268888887763     2222322222222 2356666542 22211    


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                              ....|.+.++.+++.      ..+.                 .....+..+.|+||++++.....+    .|
T Consensus      1023 --------~dg~i~vwd~~~~~~------~~~~-----------------~~~~~v~~~~~~~~~~l~~~~~dg----~v 1067 (1249)
T 3sfz_A         1023 --------EDSVIQVWNWQTGDY------VFLQ-----------------AHQETVKDFRLLQDSRLLSWSFDG----TV 1067 (1249)
T ss_dssp             --------SSSBEEEEETTTTEE------ECCB-----------------CCSSCEEEEEECSSSEEEEEESSS----EE
T ss_pred             --------CCCEEEEEECCCCce------EEEe-----------------cCCCcEEEEEEcCCCcEEEEECCC----cE
Confidence                    125788888887752      2222                 445667889999999876665443    39


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      .++|+.++++...+....     .......|||||+.|+ +.+    .+|        .|.++|+.+++     ....+.
T Consensus      1068 ~vwd~~~~~~~~~~~~~~-----~~v~~~~~s~d~~~l~-s~s----~d~--------~v~iwd~~~~~-----~~~~l~ 1124 (1249)
T 3sfz_A         1068 KVWNVITGRIERDFTCHQ-----GTVLSCAISSDATKFS-STS----ADK--------TAKIWSFDLLS-----PLHELK 1124 (1249)
T ss_dssp             EEEETTTTCCCEEEECCS-----SCCCCEEECSSSSSCE-EEC----CSS--------CCCEECSSSSS-----CSBCCC
T ss_pred             EEEECCCCceeEEEcccC-----CcEEEEEECCCCCEEE-EEc----CCC--------cEEEEECCCcc-----eeeeec
Confidence            999999988765554321     1245799999999887 555    455        47788887776     244455


Q ss_pred             CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecc--cccCCCcccEEEEEEecCCcEEEEE
Q psy463          354 RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDL--LTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       354 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~--~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      .+...+.. ++|+|||+.|+..+.++.     |...++.+  ++. ..+....  .........+..+.|||||++++..
T Consensus      1125 ~h~~~v~~-~~~s~dg~~lat~~~dg~-----i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~ 1196 (1249)
T 3sfz_A         1125 GHNGCVRC-SAFSLDGILLATGDDNGE-----IRIWNVSD--GQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSA 1196 (1249)
T ss_dssp             CCSSCEEE-EEECSSSSEEEEEETTSC-----CCEEESSS--SCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEE
T ss_pred             cCCCcEEE-EEECCCCCEEEEEeCCCE-----EEEEECCC--CceEEEeccccccccccccCceEEEEEECCCCCEEEEC
Confidence            44445554 889999998887776643     44445544  222 1110000  0001134567789999999998755


Q ss_pred             eecCCCCeEEEEecCCCe
Q psy463          431 CIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       431 ~~~~~~~~i~~~~~~~~~  448 (790)
                      .     ..+.++++.+++
T Consensus      1197 ~-----g~v~vwd~~~g~ 1209 (1249)
T 3sfz_A         1197 G-----GYLKWWNVATGD 1209 (1249)
T ss_dssp             S-----SSEEEBCSSSCB
T ss_pred             C-----CeEEEEECCCCc
Confidence            2     468888876643

>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}

Probab=99.09  E-value=1.1e-09  Score=112.85  Aligned_cols=63  Identities=16%  Similarity=0.136  Sum_probs=47.7

Q ss_pred             hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHh
Q psy463          721 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSC  788 (790)
Q Consensus       721 ~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~  788 (790)
                      ..+ ++|+|+++|+. ..+++.....+.+.+..   ..+++.+++..|.+..  +++++.+.|.+||.+.
T Consensus       238 ~~i-~~PvLli~g~~-~~~~~~~~~~~~~~~~~---~~~~~~~~g~H~~~~~~~~~~~va~~i~~fL~~~  302 (319)
T 3lcr_A          238 EGL-TAPTLYVRPAQ-PLVEQEKPEWRGDVLAA---MGQVVEAPGDHFTIIEGEHVASTAHIVGDWLREA  302 (319)
T ss_dssp             CCC-SSCEEEEEESS-CSSSCCCTHHHHHHHHT---CSEEEEESSCTTGGGSTTTHHHHHHHHHHHHHHH
T ss_pred             CCc-CCCEEEEEeCC-CCCCcccchhhhhcCCC---CceEEEeCCCcHHhhCcccHHHHHHHHHHHHHhc
Confidence            467 89999999988 55666777777776654   2477888884444444  6889999999999865

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.09  E-value=3.5e-09  Score=110.05  Aligned_cols=204  Identities=12%  Similarity=0.091  Sum_probs=114.3

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...|+|||+.|++...........|.. .-.+|+++++++++     ....+..+. .+. -+.++++++.  +|+..  
T Consensus        86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~-~~~~i~v~d~~~~~-----~~~~~~~~~-~~~-~~~~s~dg~~--l~~~~--  153 (337)
T 1pby_B           86 GAALSPDGKTLAIYESPVRLELTHFEV-QPTRVALYDAETLS-----RRKAFEAPR-QIT-MLAWARDGSK--LYGLG--  153 (337)
T ss_dssp             CEEECTTSSEEEEEEEEEEECSSCEEE-CCCEEEEEETTTTE-----EEEEEECCS-SCC-CEEECTTSSC--EEEES--
T ss_pred             ceEECCCCCEEEEEecccccccccccc-cCceEEEEECCCCc-----EEEEEeCCC-Ccc-eeEECCCCCE--EEEeC--
Confidence            458899999988875321100000000 01489999998763     222332221 111 1346776653  34332  


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcc--
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNR--  270 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~--  270 (790)
                                 ..|+++|+++++....     +..+               ....   ...|+|||+.++........  
T Consensus       154 -----------~~i~~~d~~~~~~~~~-----~~~~---------------~~~~---~~~~s~dg~~l~~~~~~~~~~~  199 (337)
T 1pby_B          154 -----------RDLHVMDPEAGTLVED-----KPIQ---------------SWEA---ETYAQPDVLAVWNQHESSGVMA  199 (337)
T ss_dssp             -----------SSEEEEETTTTEEEEE-----ECST---------------TTTT---TTBCCCBCCCCCCCCTTTTEEE
T ss_pred             -----------CeEEEEECCCCcEeee-----eecc---------------ccCC---CceeCCCccEEeeeccCCCcee
Confidence                       5799999988763211     1100               0001   23689999844333322111  


Q ss_pred             -------------------eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCccc
Q psy463          271 -------------------ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWD  331 (790)
Q Consensus       271 -------------------~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~  331 (790)
                                         ..|+++|+.+++...+.......    ......|||||+.|++ ..      +        
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~-~~------~--------  260 (337)
T 1pby_B          200 TPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV----FYFSTAVNPAKTRAFG-AY------N--------  260 (337)
T ss_dssp             EEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSS----CEEEEEECTTSSEEEE-EE------S--------
T ss_pred             eeeeccccccccccccccccceEEEeCCCCCceEeecCCCCC----ceeeEEECCCCCEEEE-eC------C--------
Confidence                               15899999998876433322110    1235899999998874 22      3        


Q ss_pred             EEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          332 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       332 ~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      .|+++|+++++     ....+..+. .... ++|+|||+.|++....     ..|.++++.+
T Consensus       261 ~v~~~d~~~~~-----~~~~~~~~~-~~~~-~~~s~dg~~l~~~~~~-----~~i~v~d~~~  310 (337)
T 1pby_B          261 VLESFDLEKNA-----SIKRVPLPH-SYYS-VNVSTDGSTVWLGGAL-----GDLAAYDAET  310 (337)
T ss_dssp             EEEEEETTTTE-----EEEEEECSS-CCCE-EEECTTSCEEEEESBS-----SEEEEEETTT
T ss_pred             eEEEEECCCCc-----CcceecCCC-ceee-EEECCCCCEEEEEcCC-----CcEEEEECcC
Confidence            69999998776     122333222 2233 7899999988876332     5788888876

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.07  E-value=2.2e-07  Score=101.00  Aligned_cols=252  Identities=10%  Similarity=0.095  Sum_probs=142.8

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcC--CcCCccCCcceeccc--cceEEEEEEeeeccCCccEEEE
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLD--DQAGIKDKVPVPLTR--GRFTVTEILAWDERENNPLLIL  188 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~--~~~~~~~~~~~~lt~--~~~~~~~~~~~~~~~~~~~~~~  188 (790)
                      ...|+|||+.|+++...++            .|.++++.  ++.     ....+..  ....+ .-+.|+++++  .++.
T Consensus       107 ~~~~s~d~~~l~~~~~~dg------------~v~iwd~~~~~~~-----~~~~~~~~~~~~~v-~~~~~sp~~~--~l~~  166 (450)
T 2vdu_B          107 NLRLTSDESRLIACADSDK------------SLLVFDVDKTSKN-----VLKLRKRFCFSKRP-NAISIAEDDT--TVII  166 (450)
T ss_dssp             EEEECTTSSEEEEEEGGGT------------EEEEEEECSSSSS-----CEEEEEEEECSSCE-EEEEECTTSS--EEEE
T ss_pred             EEEEcCCCCEEEEEECCCC------------eEEEEECcCCCCc-----eeeeeecccCCCCc-eEEEEcCCCC--EEEE
Confidence            4589999999876664433            67777776  553     2233321  11122 2346777665  3333


Q ss_pred             ecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccC---CcEEEEEe
Q psy463          189 SHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANE---SVVAAWVN  265 (790)
Q Consensus       189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD---g~~~~~~~  265 (790)
                      ..           ....|+.+++.+++.... ....+.                 .....+..+.|+||   |++++...
T Consensus       167 ~~-----------~~g~v~~~~~~~~~~~~~-~~~~~~-----------------~h~~~v~~~~~sp~~~~~~~l~s~~  217 (450)
T 2vdu_B          167 AD-----------KFGDVYSIDINSIPEEKF-TQEPIL-----------------GHVSMLTDVHLIKDSDGHQFIITSD  217 (450)
T ss_dssp             EE-----------TTSEEEEEETTSCCCSSC-CCCCSE-----------------ECSSCEEEEEEEECTTSCEEEEEEE
T ss_pred             Ee-----------CCCcEEEEecCCcccccc-cceeee-----------------cccCceEEEEEcCCCCCCcEEEEEc
Confidence            32           125799999887653210 011222                 34456889999999   88666665


Q ss_pred             ccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCccc
Q psy463          266 RVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIK  345 (790)
Q Consensus       266 r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~  345 (790)
                      .+.   .|.++++.++.+...+.. +...   ....+.|+ ||+.|+ +.+    .++        .|.++|+.+++.  
T Consensus       218 ~d~---~i~vwd~~~~~~~~~~~~-~h~~---~v~~~~~s-d~~~l~-s~~----~d~--------~v~vwd~~~~~~--  274 (450)
T 2vdu_B          218 RDE---HIKISHYPQCFIVDKWLF-GHKH---FVSSICCG-KDYLLL-SAG----GDD--------KIFAWDWKTGKN--  274 (450)
T ss_dssp             TTS---CEEEEEESCTTCEEEECC-CCSS---CEEEEEEC-STTEEE-EEE----SSS--------EEEEEETTTCCE--
T ss_pred             CCC---cEEEEECCCCceeeeeec-CCCC---ceEEEEEC-CCCEEE-EEe----CCC--------eEEEEECCCCcE--
Confidence            543   388888888765433221 1111   23478999 999887 555    455        789999987761  


Q ss_pred             CCCccccc-------------------------CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce
Q psy463          346 DKVPVPLT-------------------------RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC  400 (790)
Q Consensus       346 ~~~~~~lt-------------------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~  400 (790)
                         ...+.                         .....+.. +.|+||++.|++.+....  ...||.+.-.. .++.+.
T Consensus       275 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-i~~~~~~~~l~~~~~~d~--~i~iw~~~~~~-~~~l~~  347 (450)
T 2vdu_B          275 ---LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK-IIKSKNLPFVAFFVEATK--CIIILEMSEKQ-KGDLAL  347 (450)
T ss_dssp             ---EEEEECHHHHGGGCCTTSBC----------CBCCCEEE-EEECSSSSEEEEEETTCS--EEEEEEECSSS-TTCEEE
T ss_pred             ---eeeecchhhhhhhhhhcccccccccccccccceEEEEE-EEEeCCCCEEEEEECCCC--eEEEEEeccCC-CCceee
Confidence               22221                         11122333 789999998888773321  24555541022 122233


Q ss_pred             eeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CC------eEEEEecCCCeEE
Q psy463          401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IP------EIMLFDKTGQRLL  450 (790)
Q Consensus       401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~------~i~~~~~~~~~~~  450 (790)
                      +.. +   . ....+..+.|+|++ .+ ++.+... +.      .+|.++..+++.+
T Consensus       348 ~~~-~---~-~~~~v~~~~~~~~~-~~-v~~~~~~~~~~~~~~i~v~~~~~~~~~~~  397 (450)
T 2vdu_B          348 KQI-I---T-FPYNVISLSAHNDE-FQ-VTLDNKESSGVQKNFAKFIEYNLNENSFV  397 (450)
T ss_dssp             EEE-E---E-CSSCEEEEEEETTE-EE-EEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred             ccE-e---c-cCCceEEEEecCCc-EE-EEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence            221 1   1 12567889999953 33 3443333 32      6777777777665

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.06  E-value=7.5e-10  Score=119.15  Aligned_cols=148  Identities=8%  Similarity=0.102  Sum_probs=84.6

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCcee----EEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCD----VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~----~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                      ...+..++||||| +++......    +++++++++...    .+..  ...   ......+||  |+.|+ +++     
T Consensus       182 ~~~V~sVawSPdg-Laass~D~t----VrlWd~~~~~~~~~~~tL~~--~h~---~~V~svaFs--g~~LA-Sa~-----  243 (588)
T 2j04_A          182 KDWVTHIVWYEDV-LVAALSNNS----VFSMTVSASSHQPVSRMIQN--ASR---RKITDLKIV--DYKVV-LTC-----  243 (588)
T ss_dssp             CCCEEEEEEETTE-EEEEETTCC----EEEECCCSSSSCCCEEEEEC--CCS---SCCCCEEEE--TTEEE-EEC-----
T ss_pred             cccEEEEEEcCCc-EEEEeCCCe----EEEEECCCCccccceeeecc--ccc---CcEEEEEEE--CCEEE-EEe-----
Confidence            4578899999999 555444322    889999887743    1211  111   125588999  57676 444     


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCccccc-CCCeEEeEEEee--ecCCCEEEEEEcCCCCceEEEEEE-----EcCC
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT-RGRFTVTEILAW--DEKENNVYFLSTQGSPIVQHMYRI-----NIAD  393 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~~~~l~~~-----~~~~  393 (790)
                      ++        .|.++|+.+++      ...+. .+...+.. +++  +||+..|+.....   +. +||..     ..++
T Consensus       244 ~~--------tIkLWd~~~~~------~~~~~~gh~~~V~~-va~~~s~d~~~La~a~ed---G~-klw~~d~~~~spd~  304 (588)
T 2j04_A          244 PG--------YVHKIDLKNYS------ISSLKTGSLENFHI-IPLNHEKESTILLMSNKT---SY-KVLLEDELHVTADN  304 (588)
T ss_dssp             SS--------EEEEEETTTTE------EEEEECSCCSCCCE-EEETTCSSCEEEEECSSC---EE-EEEESSSEEEECCC
T ss_pred             CC--------eEEEEECCCCe------EEEEEcCCCceEEE-EEeeeCCCCCEEEEEcCC---CC-EEEeeccEEECCCc
Confidence            24        79999998876      43333 33333344 688  9998654443322   22 56654     2222


Q ss_pred             CCCCcceeeec----------ccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463          394 PTATPECITCD----------LLTSANQKCSYSGATFSTNVSYYVLSCIG  433 (790)
Q Consensus       394 ~~~~~~~lt~~----------~~~~~~~~~~~~~~~~s~dg~~~~~~~~~  433 (790)
                         ........          ....-++...+++++|||||+.++..+.-
T Consensus       305 ---~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~i  351 (588)
T 2j04_A          305 ---IIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYDM  351 (588)
T ss_dssp             ---SSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEEE
T ss_pred             ---eEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEec
Confidence               11000000          00011134567889999999988876544

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.05  E-value=8.4e-08  Score=102.23  Aligned_cols=231  Identities=13%  Similarity=0.132  Sum_probs=125.0

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+|||+.|+..+. +            +.|.++++.+++     ....+..+...+. -+.|.++++  .++...   
T Consensus       129 v~~s~dg~~l~s~~~-d------------~~i~iwd~~~~~-----~~~~~~~h~~~v~-~~~~~p~~~--~l~s~s---  184 (393)
T 1erj_A          129 VCFSPDGKFLATGAE-D------------RLIRIWDIENRK-----IVMILQGHEQDIY-SLDYFPSGD--KLVSGS---  184 (393)
T ss_dssp             EEECTTSSEEEEEET-T------------SCEEEEETTTTE-----EEEEECCCSSCEE-EEEECTTSS--EEEEEE---
T ss_pred             EEECCCCCEEEEEcC-C------------CeEEEEECCCCc-----EEEEEccCCCCEE-EEEEcCCCC--EEEEec---
Confidence            478999998775432 2            268888987763     2233333333343 346666654  232221   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEcc-CCcEEEEEeccCcceE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWAN-ESVVAAWVNRVQNRAR  272 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~~~~~~r~~~~~~  272 (790)
                              ....|.+.|+.+++..     ..+                  .....+..+.|+| ||++++....+..   
T Consensus       185 --------~d~~v~iwd~~~~~~~-----~~~------------------~~~~~v~~~~~~~~~~~~l~~~s~d~~---  230 (393)
T 1erj_A          185 --------GDRTVRIWDLRTGQCS-----LTL------------------SIEDGVTTVAVSPGDGKYIAAGSLDRA---  230 (393)
T ss_dssp             --------TTSEEEEEETTTTEEE-----EEE------------------ECSSCEEEEEECSTTCCEEEEEETTSC---
T ss_pred             --------CCCcEEEEECCCCeeE-----EEE------------------EcCCCcEEEEEECCCCCEEEEEcCCCc---
Confidence                    1157778888876521     111                  1234467899999 8886665544332   


Q ss_pred             EEEEECCCCceeEEEEEeCC--CcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCC---
Q psy463          273 ITRCSINEGTCDVVFSRDLD--RGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK---  347 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~--~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~---  347 (790)
                      |.++|+.++...........  .+.........|+|||+.|+ +.+    .+|        .|.++|+.........   
T Consensus       231 v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s----~d~--------~v~~wd~~~~~~~~~~~~~  297 (393)
T 1erj_A          231 VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV-SGS----LDR--------SVKLWNLQNANNKSDSKTP  297 (393)
T ss_dssp             EEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE-EEE----TTS--------EEEEEEC------------
T ss_pred             EEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEE-EEe----CCC--------EEEEEECCCCCCcccccCC
Confidence            88889988865433311100  01111234689999999887 555    456        6888887653200000   


Q ss_pred             ----CcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec-
Q psy463          348 ----VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST-  422 (790)
Q Consensus       348 ----~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~-  422 (790)
                          ....+..+...+.. ++|+|+++.|+..+.+     ..|+..++..  ++......      +....+..+.|++ 
T Consensus       298 ~~~~~~~~~~~h~~~v~~-~~~~~~~~~l~sgs~D-----~~v~iwd~~~--~~~~~~l~------~h~~~v~~v~~~~~  363 (393)
T 1erj_A          298 NSGTCEVTYIGHKDFVLS-VATTQNDEYILSGSKD-----RGVLFWDKKS--GNPLLMLQ------GHRNSVISVAVANG  363 (393)
T ss_dssp             ---CEEEEEECCSSCEEE-EEECGGGCEEEEEETT-----SEEEEEETTT--CCEEEEEE------CCSSCEEEEEECSS
T ss_pred             CCCcceEEEecccCcEEE-EEECCCCCEEEEEeCC-----CeEEEEECCC--CeEEEEEC------CCCCCEEEEEecCC
Confidence                00112222222333 7899999987766655     3566667665  33222111      1445667777776 


Q ss_pred             -----CCcEEEE
Q psy463          423 -----NVSYYVL  429 (790)
Q Consensus       423 -----dg~~~~~  429 (790)
                           ++.+++.
T Consensus       364 ~~~~p~~~~l~s  375 (393)
T 1erj_A          364 SSLGPEYNVFAT  375 (393)
T ss_dssp             CTTCTTCEEEEE
T ss_pred             cCcCCCCCEEEE
Confidence                 5555533

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.05  E-value=6.9e-08  Score=101.24  Aligned_cols=277  Identities=9%  Similarity=0.039  Sum_probs=150.0

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...++.|||||++||-.+ .++...+|....  +.      .......+......+.|++++..+.-.....   .+.++
T Consensus        66 ~V~~~~~s~d~~~l~s~s-~Dg~v~vWd~~~--~~------~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~---~i~v~  133 (354)
T 2pbi_B           66 KVLCMDWCKDKRRIVSSS-QDGKVIVWDSFT--TN------KEHAVTMPCTWVMACAYAPSGCAIACGGLDN---KCSVY  133 (354)
T ss_dssp             CEEEEEECTTSSEEEEEE-TTSEEEEEETTT--CC------EEEEEECSSSCCCEEEECTTSSEEEEESTTS---EEEEE
T ss_pred             eEEEEEECCCCCEEEEEe-CCCeEEEEECCC--CC------cceEEecCCCCEEEEEECCCCCEEEEeeCCC---CEEEE
Confidence            346788999999888655 577777776432  21      1111222222334456666655432221111   12223


Q ss_pred             eCCCC------eeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcce
Q psy463           89 SINEG------TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  162 (790)
Q Consensus        89 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  162 (790)
                      +....      .....+...  ...   .....|+|+++.|+-.+ .+            +.|.++|+.+++     ...
T Consensus       134 ~~~~~~~~~~~~~~~~~~~h--~~~---v~~~~~~~~~~~l~t~s-~D------------~~v~lwd~~~~~-----~~~  190 (354)
T 2pbi_B          134 PLTFDKNENMAAKKKSVAMH--TNY---LSACSFTNSDMQILTAS-GD------------GTCALWDVESGQ-----LLQ  190 (354)
T ss_dssp             ECCCCTTCCSGGGCEEEEEC--SSC---EEEEEECSSSSEEEEEE-TT------------SEEEEEETTTCC-----EEE
T ss_pred             EEeccccccccccceeeecc--CCc---EEEEEEeCCCCEEEEEe-CC------------CcEEEEeCCCCe-----EEE
Confidence            22111      001111111  111   12358899998877433 22            278888987773     233


Q ss_pred             eccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCC
Q psy463          163 PLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE  242 (790)
Q Consensus       163 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~  242 (790)
                      .+......+.. ..+.+..+...++...           ....|.+.|+.+++..     ..+.                
T Consensus       191 ~~~~h~~~v~~-~~~~~~~~g~~l~sgs-----------~Dg~v~~wd~~~~~~~-----~~~~----------------  237 (354)
T 2pbi_B          191 SFHGHGADVLC-LDLAPSETGNTFVSGG-----------CDKKAMVWDMRSGQCV-----QAFE----------------  237 (354)
T ss_dssp             EEECCSSCEEE-EEECCCSSCCEEEEEE-----------TTSCEEEEETTTCCEE-----EEEC----------------
T ss_pred             EEcCCCCCeEE-EEEEeCCCCCEEEEEe-----------CCCeEEEEECCCCcEE-----EEec----------------
Confidence            33333333332 2333322111222221           1257888888876531     1222                


Q ss_pred             CCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          243 NNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       243 ~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                       .....+..+.|+|||+.++....+.   .|.++|+.++....+.....   .........|||||+.|+ ..+    .+
T Consensus       238 -~h~~~v~~v~~~p~~~~l~s~s~D~---~v~lwd~~~~~~~~~~~~~~---~~~~~~~~~~s~~g~~l~-~g~----~d  305 (354)
T 2pbi_B          238 -THESDVNSVRYYPSGDAFASGSDDA---TCRLYDLRADREVAIYSKES---IIFGASSVDFSLSGRLLF-AGY----ND  305 (354)
T ss_dssp             -CCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEEECCTT---CCSCEEEEEECTTSSEEE-EEE----TT
T ss_pred             -CCCCCeEEEEEeCCCCEEEEEeCCC---eEEEEECCCCcEEEEEcCCC---cccceeEEEEeCCCCEEE-EEE----CC
Confidence             4456688999999999665554433   28888988876554443211   001123688999999777 554    45


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCC
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQG  379 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~  379 (790)
                      +        .|.++|+.+++     ....+..+...+.. ++|+|||+.|+..+.++
T Consensus       306 ~--------~i~vwd~~~~~-----~~~~l~~h~~~v~~-l~~spdg~~l~sgs~D~  348 (354)
T 2pbi_B          306 Y--------TINVWDVLKGS-----RVSILFGHENRVST-LRVSPDGTAFCSGSWDH  348 (354)
T ss_dssp             S--------CEEEEETTTCS-----EEEEECCCSSCEEE-EEECTTSSCEEEEETTS
T ss_pred             C--------cEEEEECCCCc-----eEEEEECCCCcEEE-EEECCCCCEEEEEcCCC
Confidence            5        58899987765     24445555545555 89999999887766653

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.05  E-value=7.3e-08  Score=119.33  Aligned_cols=294  Identities=12%  Similarity=0.129  Sum_probs=164.6

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEE
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITR   87 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~   87 (790)
                      +...+++|||||++||..+ .++...+|.+..  ++      .......+...+..+.|++++..+.-...   .-.+.+
T Consensus       616 ~~v~~~~~s~~~~~l~s~~-~d~~i~vw~~~~--~~------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d~~v~v  683 (1249)
T 3sfz_A          616 DAVYHACFSQDGQRIASCG-ADKTLQVFKAET--GE------KLLDIKAHEDEVLCCAFSSDDSYIATCSA---DKKVKI  683 (1249)
T ss_dssp             SCEEEEEECTTSSEEEEEE-TTSCEEEEETTT--CC------EEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEE
T ss_pred             ccEEEEEECCCCCEEEEEe-CCCeEEEEECCC--CC------EEEEeccCCCCEEEEEEecCCCEEEEEeC---CCeEEE
Confidence            3446788999999998765 466666665543  32      11112223334455678877765543332   234778


Q ss_pred             eeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecccc
Q psy463           88 CSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG  167 (790)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~  167 (790)
                      ++..++++...+......  +   ....|+|+++..++.+...+           +.|.++++.++.     ....+...
T Consensus       684 wd~~~~~~~~~~~~~~~~--v---~~~~~~~~~~~~~l~sg~~d-----------~~v~vwd~~~~~-----~~~~~~~h  742 (1249)
T 3sfz_A          684 WDSATGKLVHTYDEHSEQ--V---NCCHFTNKSNHLLLATGSND-----------FFLKLWDLNQKE-----CRNTMFGH  742 (1249)
T ss_dssp             EETTTCCEEEEEECCSSC--E---EEEEECSSSSCCEEEEEETT-----------SCEEEEETTSSS-----EEEEECCC
T ss_pred             EECCCCceEEEEcCCCCc--E---EEEEEecCCCceEEEEEeCC-----------CeEEEEECCCcc-----hhheecCC
Confidence            888888766555433211  1   23588998765444443222           168888887763     22233333


Q ss_pred             ceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCc-CCccccccccceeehhhcccCCCCCC
Q psy463          168 RFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK-VPVPLTRGRFTVTEILAWDEKENNVE  246 (790)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~lt~~~~~~~~~~~~~~~~~~~~  246 (790)
                      ...+ .-..|+++++  .++...           ....|.+.|+.+++..... .........          .......
T Consensus       743 ~~~v-~~~~~sp~~~--~l~s~s-----------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~----------~~~~~~~  798 (1249)
T 3sfz_A          743 TNSV-NHCRFSPDDE--LLASCS-----------ADGTLRLWDVRSANERKSINVKRFFLSSE----------DPPEDVE  798 (1249)
T ss_dssp             SSCE-EEEEECSSTT--EEEEEE-----------SSSEEEEEEGGGTEEEEEEECCCCC------------------CCC
T ss_pred             CCCE-EEEEEecCCC--EEEEEE-----------CCCeEEEEeCCCCcccceecccccccccC----------Ccccccc
Confidence            3233 3346666554  222221           1146777787765421110 000000000          0000122


Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      ..+..+.|+|||+.++....+    .+.+++..++.......... .   .......|+|||+.++ +.+    .+|   
T Consensus       799 ~~v~~~~~s~dg~~l~~~~~~----~v~~~d~~~~~~~~~~~~~~-~---~~v~~~~~sp~~~~l~-~~~----~dg---  862 (1249)
T 3sfz_A          799 VIVKCCSWSADGDKIIVAAKN----KVLLFDIHTSGLLAEIHTGH-H---STIQYCDFSPYDHLAV-IAL----SQY---  862 (1249)
T ss_dssp             CCBCCCCBCTTSSEEEEEETT----EEEEEETTTCCEEEEEECSS-S---SCCCEEEECSSTTEEE-EEC----SSS---
T ss_pred             ceEEEEEECCCCCEEEEEcCC----cEEEEEecCCCceeEEcCCC-C---CceEEEEEcCCCCEEE-EEe----CCC---
Confidence            345678899999965555433    38999998887654443211 1   2245789999999887 454    345   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR  388 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  388 (790)
                           .|.++++.++.     ....+..+...+.. +.|+|||+.++..+.++.   ..+|.
T Consensus       863 -----~v~vwd~~~~~-----~~~~~~~h~~~v~~-v~~spdg~~l~s~s~dg~---v~vw~  910 (1249)
T 3sfz_A          863 -----CVELWNIDSRL-----KVADCRGHLSWVHG-VMFSPDGSSFLTASDDQT---IRVWE  910 (1249)
T ss_dssp             -----CEEEEETTTTE-----EEEEECCCSSCEEE-EEECTTSSEEEEEETTSC---EEEEE
T ss_pred             -----eEEEEEcCCCc-----eeeecCCCccceEE-EEECCCCCEEEEEeCCCe---EEEEE
Confidence                 58888988775     23345544444555 889999998887776643   45554

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.05  E-value=8.4e-08  Score=102.85  Aligned_cols=221  Identities=10%  Similarity=0.123  Sum_probs=131.1

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      .|+|||+.|+-.+ .++            .|.++++.++.     ....+......+. -+.|.++++  .++...    
T Consensus       157 ~~~~~~~~l~sgs-~D~------------~i~iwd~~~~~-----~~~~~~~h~~~V~-~v~~~p~~~--~l~s~s----  211 (410)
T 1vyh_C          157 SFDHSGKLLASCS-ADM------------TIKLWDFQGFE-----CIRTMHGHDHNVS-SVSIMPNGD--HIVSAS----  211 (410)
T ss_dssp             EECTTSSEEEEEE-TTS------------CCCEEETTSSC-----EEECCCCCSSCEE-EEEECSSSS--EEEEEE----
T ss_pred             EEcCCCCEEEEEe-CCC------------eEEEEeCCCCc-----eeEEEcCCCCCEE-EEEEeCCCC--EEEEEe----
Confidence            6788988655332 222            56666776653     2223333333333 345666554  222221    


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT  274 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~  274 (790)
                             ....|.+.|+.++..     ...+.                 .....+..+.|+|||++++....+..   |.
T Consensus       212 -------~D~~i~~wd~~~~~~-----~~~~~-----------------~h~~~v~~~~~~~~g~~l~s~s~D~~---v~  259 (410)
T 1vyh_C          212 -------RDKTIKMWEVQTGYC-----VKTFT-----------------GHREWVRMVRPNQDGTLIASCSNDQT---VR  259 (410)
T ss_dssp             -------TTSEEEEEETTTCCE-----EEEEE-----------------CCSSCEEEEEECTTSSEEEEEETTSC---EE
T ss_pred             -------CCCeEEEEECCCCcE-----EEEEe-----------------CCCccEEEEEECCCCCEEEEEcCCCe---EE
Confidence                   115788888887653     12222                 44556788999999996665544332   88


Q ss_pred             EEECCCCceeEEEEEeCCCcccccCCceeEccC--------------------CCEEEEEEccccccCCCCCcCcccEEE
Q psy463          275 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD--------------------GKKMLLILSHNQESDGSTPVDSWDHLT  334 (790)
Q Consensus       275 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spD--------------------g~~i~~~~~~~~~~~g~~~~~~~~~l~  334 (790)
                      ++++.++++...+...  .   .......|+|+                    |+.|+ +.+    .+|        .|.
T Consensus       260 vwd~~~~~~~~~~~~h--~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-sgs----~D~--------~i~  321 (410)
T 1vyh_C          260 VWVVATKECKAELREH--R---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGS----RDK--------TIK  321 (410)
T ss_dssp             EEETTTCCEEEEECCC--S---SCEEEEEECCSCGGGGGGGCCSCC-------CCEEE-EEE----TTS--------EEE
T ss_pred             EEECCCCceeeEecCC--C---ceEEEEEEcCcccccchhhhccccccccCCCCCEEE-EEe----CCC--------eEE
Confidence            8899888765444221  1   11346788887                    44454 555    455        689


Q ss_pred             EEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecccccCCCcc
Q psy463          335 FIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDLLTSANQKC  413 (790)
Q Consensus       335 ~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~  413 (790)
                      ++|+.+++     ....+..+...+.. +.|+|+|+.|+-.+.+     ..|...++..  ++ ...+..       ...
T Consensus       322 iwd~~~~~-----~~~~~~~h~~~v~~-v~~~~~g~~l~s~s~D-----~~i~vwd~~~--~~~~~~~~~-------h~~  381 (410)
T 1vyh_C          322 MWDVSTGM-----CLMTLVGHDNWVRG-VLFHSGGKFILSCADD-----KTLRVWDYKN--KRCMKTLNA-------HEH  381 (410)
T ss_dssp             EEETTTTE-----EEEEEECCSSCEEE-EEECSSSSCEEEEETT-----TEEEEECCTT--SCCCEEEEC-------CSS
T ss_pred             EEECCCCc-----eEEEEECCCCcEEE-EEEcCCCCEEEEEeCC-----CeEEEEECCC--CceEEEEcC-------CCC
Confidence            99998776     23445444444554 7899999987766655     3455556654  32 222322       455


Q ss_pred             cEEEEEEecCCcEEEEE
Q psy463          414 SYSGATFSTNVSYYVLS  430 (790)
Q Consensus       414 ~~~~~~~s~dg~~~~~~  430 (790)
                      .+..+.|+|++.+++..
T Consensus       382 ~v~~l~~~~~~~~l~sg  398 (410)
T 1vyh_C          382 FVTSLDFHKTAPYVVTG  398 (410)
T ss_dssp             CEEEEEECSSSSCEEEE
T ss_pred             cEEEEEEcCCCCEEEEE
Confidence            78889999999987644

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.04  E-value=3.2e-08  Score=103.44  Aligned_cols=130  Identities=8%  Similarity=0.087  Sum_probs=76.3

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC-ccc--ccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR-GWF--EPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~-~~~--~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      ..++|||||++++.+....+...++.++..+++.+.+....... ++.  .....++|||||+.|++...    .++   
T Consensus       190 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~----~~~---  262 (347)
T 3hfq_A          190 RHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR----GYN---  262 (347)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE----TTT---
T ss_pred             ceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC----CCC---
Confidence            45889999997777665555555666666567665444332111 000  01235889999998874433    233   


Q ss_pred             cCcccEEEEEEcCC-CCcccCCCccc---ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          327 VDSWDHLTFIDLDD-QAGIKDKVPVP---LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       327 ~~~~~~l~~~d~~~-~~~~~~~~~~~---lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                           .|.+++++. ++      .+.   +..+...... ++|+|||++||+......  ...+|.++.++  ++.+.+.
T Consensus       263 -----~v~v~~~~~~g~------~~~~~~~~~~~~~~~~-~~~spdg~~l~v~~~~~~--~v~v~~~d~~t--g~l~~~~  326 (347)
T 3hfq_A          263 -----TLAVFAVTADGH------LTLIQQISTEGDFPRD-FDLDPTEAFVVVVNQNTD--NATLYARDLTS--GKLSLLQ  326 (347)
T ss_dssp             -----EEEEEEECGGGC------EEEEEEEECSSSCCCE-EEECTTSSEEEEEETTTT--EEEEEEECTTT--CCEEEEE
T ss_pred             -----EEEEEEECCCCc------EEEeEEEecCCCCcCe-EEECCCCCEEEEEEcCCC--cEEEEEEeCCC--CeEEecc
Confidence                 577777652 22      222   2221112233 789999999888776532  36777777766  5555443

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.04  E-value=8.3e-08  Score=100.47  Aligned_cols=162  Identities=11%  Similarity=0.066  Sum_probs=95.4

Q ss_pred             EEEEEE----EccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEcc---CCCEEEEEEccccc
Q psy463          248 VLSRVN----WANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS---DGKKMLLILSHNQE  320 (790)
Q Consensus       248 ~~~~~~----wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~sp---Dg~~i~~~~~~~~~  320 (790)
                      .+..+.    |+|||++++....+.   .|.++|+.+++.........      ......|+|   +|+.|+ +.+    
T Consensus       166 ~v~~~~~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~l~-~~~----  231 (357)
T 3i2n_A          166 DCWTVAFGNAYNQEERVVCAGYDNG---DIKLFDLRNMALRWETNIKN------GVCSLEFDRKDISMNKLV-ATS----  231 (357)
T ss_dssp             CEEEEEEECCCC-CCCEEEEEETTS---EEEEEETTTTEEEEEEECSS------CEEEEEESCSSSSCCEEE-EEE----
T ss_pred             ceEEEEEEeccCCCCCEEEEEccCC---eEEEEECccCceeeecCCCC------ceEEEEcCCCCCCCCEEE-EEC----
Confidence            445555    899999666554432   39999999988754433221      245789999   999887 454    


Q ss_pred             cCCCCCcCcccEEEEEEcCCCCcccCCCccccc-----CCCeEEeEEEeeecCCCEEEEEEcC-CCCceEEEEEEEcCCC
Q psy463          321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT-----RGRFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMYRINIADP  394 (790)
Q Consensus       321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-----~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~~  394 (790)
                      .+|        .|.++|+.+++     ....+.     .....+.. +.|+|+++.+++.+.. +.   ..||.+.....
T Consensus       232 ~dg--------~i~i~d~~~~~-----~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~dg~---i~iwd~~~~~~  294 (357)
T 3i2n_A          232 LEG--------KFHVFDMRTQH-----PTKGFASVSEKAHKSTVWQ-VRHLPQNRELFLTAGGAGG---LHLWKYEYPIQ  294 (357)
T ss_dssp             STT--------EEEEEEEEEEE-----TTTEEEEEEEECCSSCEEE-EEEETTEEEEEEEEETTSE---EEEEEEECCSC
T ss_pred             CCC--------eEEEEeCcCCC-----cccceeeeccCCCcCCEEE-EEECCCCCcEEEEEeCCCc---EEEeecCCCcc
Confidence            456        68888887654     122222     33334444 7899999855454443 32   56666553220


Q ss_pred             C------C-------CcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          395 T------A-------TPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       395 ~------~-------~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .      +       ..+++..    .......+..+.|+|++++++++.+..  ..|.++++..
T Consensus       295 ~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~s~~~d--~~i~iw~~~~  353 (357)
T 3i2n_A          295 RSKKDSEGIEMGVAGSVSLLQN----VTLSTQPISSLDWSPDKRGLCVCSSFD--QTVRVLIVTK  353 (357)
T ss_dssp             C--CCTTSCCCCCCCEEEEEEE----EECCSSCEEEEEECSSSTTEEEEEETT--SEEEEEEECC
T ss_pred             cccccCCCCccccccccceeec----cccCCCCeeEEEEcCCCCeEEEEecCC--CcEEEEECCC
Confidence            0      0       0011211    112455778899999999987655443  3566666543

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.03  E-value=1.4e-07  Score=100.93  Aligned_cols=269  Identities=9%  Similarity=0.091  Sum_probs=156.9

Q ss_pred             EEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCccee
Q psy463           84 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  163 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~  163 (790)
                      .+.+++..++.+........ ...+   ....|+|||+.|+..+. +            +.|.++++.+++     ....
T Consensus       114 ~v~lw~~~~~~~~~~~~~~~-~~~v---~~v~~s~~~~~l~~~~~-d------------g~i~iwd~~~~~-----~~~~  171 (401)
T 4aez_A          114 NVYVWNADSGSVSALAETDE-STYV---ASVKWSHDGSFLSVGLG-N------------GLVDIYDVESQT-----KLRT  171 (401)
T ss_dssp             EEEEEETTTCCEEEEEECCT-TCCE---EEEEECTTSSEEEEEET-T------------SCEEEEETTTCC-----EEEE
T ss_pred             eEEEeeCCCCcEeEeeecCC-CCCE---EEEEECCCCCEEEEECC-C------------CeEEEEECcCCe-----EEEE
Confidence            46778887777666554321 1111   34689999998876542 1            268888887763     2333


Q ss_pred             ccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCC
Q psy463          164 LTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKEN  243 (790)
Q Consensus       164 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~  243 (790)
                      +......+..+ .|++.    +++...           ....|.+.|+..+...    ...+.                 
T Consensus       172 ~~~~~~~v~~~-~~~~~----~l~~~~-----------~dg~i~i~d~~~~~~~----~~~~~-----------------  214 (401)
T 4aez_A          172 MAGHQARVGCL-SWNRH----VLSSGS-----------RSGAIHHHDVRIANHQ----IGTLQ-----------------  214 (401)
T ss_dssp             ECCCSSCEEEE-EEETT----EEEEEE-----------TTSEEEEEETTSSSCE----EEEEE-----------------
T ss_pred             ecCCCCceEEE-EECCC----EEEEEc-----------CCCCEEEEecccCcce----eeEEc-----------------
Confidence            43333344433 44332    333322           1257888888743210    11222                 


Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .....+..+.|+|||++++....+.   .|.++|+.+++........  .   .......|+|+|+.++.+.+.  ..+|
T Consensus       215 ~~~~~v~~~~~~~~~~~l~s~~~d~---~v~iwd~~~~~~~~~~~~~--~---~~v~~~~~~p~~~~ll~~~~g--s~d~  284 (401)
T 4aez_A          215 GHSSEVCGLAWRSDGLQLASGGNDN---VVQIWDARSSIPKFTKTNH--N---AAVKAVAWCPWQSNLLATGGG--TMDK  284 (401)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTCSSEEEEECCC--S---SCCCEEEECTTSTTEEEEECC--TTTC
T ss_pred             CCCCCeeEEEEcCCCCEEEEEeCCC---eEEEccCCCCCccEEecCC--c---ceEEEEEECCCCCCEEEEecC--CCCC
Confidence            4456788999999999666554432   2999999887665443321  1   124589999999888755430  1244


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                              .|.++|+.+++     ....+.. ...+.. +.|+|+++.++..+....   ..|...++..  ++...+..
T Consensus       285 --------~i~i~d~~~~~-----~~~~~~~-~~~v~~-~~~s~~~~~l~~~~g~~d---g~i~v~~~~~--~~~~~~~~  344 (401)
T 4aez_A          285 --------QIHFWNAATGA-----RVNTVDA-GSQVTS-LIWSPHSKEIMSTHGFPD---NNLSIWSYSS--SGLTKQVD  344 (401)
T ss_dssp             --------EEEEEETTTCC-----EEEEEEC-SSCEEE-EEECSSSSEEEEEECTTT---CEEEEEEEET--TEEEEEEE
T ss_pred             --------EEEEEECCCCC-----EEEEEeC-CCcEEE-EEECCCCCeEEEEeecCC---CcEEEEecCC--ccceeEEE
Confidence                    79999998776     1333332 233444 899999998887753211   3444445443  22222211


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                          ..+....+..+.|+|||++++....   -..|.++++.+++
T Consensus       345 ----~~~h~~~v~~~~~s~dg~~l~s~~~---dg~i~iw~~~~~~  382 (401)
T 4aez_A          345 ----IPAHDTRVLYSALSPDGRILSTAAS---DENLKFWRVYDGD  382 (401)
T ss_dssp             ----EECCSSCCCEEEECTTSSEEEEECT---TSEEEEEECCC--
T ss_pred             ----ecCCCCCEEEEEECCCCCEEEEEeC---CCcEEEEECCCCc
Confidence                0113456778999999998865432   3468888876643

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.02  E-value=7.4e-08  Score=103.52  Aligned_cols=280  Identities=13%  Similarity=0.146  Sum_probs=155.7

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ....+.|||||+.||..+. ++...+|.  ..|..       ......+...+..+.|++++..+......   -.+.++
T Consensus       110 ~v~~~~~s~~~~~l~~~~~-dg~i~i~~--~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iw  176 (425)
T 1r5m_A          110 QVTCLAWSHDGNSIVTGVE-NGELRLWN--KTGAL-------LNVLNFHRAPIVSVKWNKDGTHIISMDVE---NVTILW  176 (425)
T ss_dssp             CEEEEEECTTSSEEEEEET-TSCEEEEE--TTSCE-------EEEECCCCSCEEEEEECTTSSEEEEEETT---CCEEEE
T ss_pred             ceEEEEEcCCCCEEEEEeC-CCeEEEEe--CCCCe-------eeeccCCCccEEEEEECCCCCEEEEEecC---CeEEEE
Confidence            4567889999999987654 56666665  43432       11222233334556777776655433332   235667


Q ss_pred             eCCCCeeeEEEeecCCCCc-c------c---cCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccC
Q psy463           89 SINEGTCDVVFSRDLDRGW-F------E---PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD  158 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~-~------~---~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~  158 (790)
                      +..++++...+.......- .      .   ......|+|++. ++. ...            -+.|.++++.++.    
T Consensus       177 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~------------~g~i~~~d~~~~~----  238 (425)
T 1r5m_A          177 NVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVI-PGP------------KGAIFVYQITEKT----  238 (425)
T ss_dssp             ETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEE-ECG------------GGCEEEEETTCSS----
T ss_pred             ECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEE-EcC------------CCeEEEEEcCCCc----
Confidence            7777665544433221100 0      0   023457888875 332 222            2279999988764    


Q ss_pred             CcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhc
Q psy463          159 KVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW  238 (790)
Q Consensus       159 ~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~  238 (790)
                       ....+......+ .-+.|+++++  .++...           ....|.++++.+++.     ...+.            
T Consensus       239 -~~~~~~~~~~~i-~~~~~~~~~~--~l~~~~-----------~d~~i~i~d~~~~~~-----~~~~~------------  286 (425)
T 1r5m_A          239 -PTGKLIGHHGPI-SVLEFNDTNK--LLLSAS-----------DDGTLRIWHGGNGNS-----QNCFY------------  286 (425)
T ss_dssp             -CSEEECCCSSCE-EEEEEETTTT--EEEEEE-----------TTSCEEEECSSSBSC-----SEEEC------------
T ss_pred             -eeeeeccCCCce-EEEEECCCCC--EEEEEc-----------CCCEEEEEECCCCcc-----ceEec------------
Confidence             223333333333 2346666654  333322           115788888877652     12222            


Q ss_pred             ccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccc
Q psy463          239 DEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN  318 (790)
Q Consensus       239 ~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~  318 (790)
                           .....+..+.|+||| .++....+.   .|.++++.++++........  .   ......|+|||+.|+ +.+  
T Consensus       287 -----~~~~~i~~~~~~~~~-~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~--~---~i~~~~~s~~~~~l~-~~~--  349 (425)
T 1r5m_A          287 -----GHSQSIVSASWVGDD-KVISCSMDG---SVRLWSLKQNTLLALSIVDG--V---PIFAGRISQDGQKYA-VAF--  349 (425)
T ss_dssp             -----CCSSCEEEEEEETTT-EEEEEETTS---EEEEEETTTTEEEEEEECTT--C---CEEEEEECTTSSEEE-EEE--
T ss_pred             -----CCCccEEEEEECCCC-EEEEEeCCC---cEEEEECCCCcEeEecccCC--c---cEEEEEEcCCCCEEE-EEE--
Confidence                 345667899999999 444443322   49999998887655544311  1   144789999999887 454  


Q ss_pred             cccCCCCCcCcccEEEEEEcCCCCccc---------------CCCcccccCCCe--EEeEEEeeecCCCEEEEEEcCC
Q psy463          319 QESDGSTPVDSWDHLTFIDLDDQAGIK---------------DKVPVPLTRGRF--TVTEILAWDEKENNVYFLSTQG  379 (790)
Q Consensus       319 ~~~~g~~~~~~~~~l~~~d~~~~~~~~---------------~~~~~~lt~~~~--~~~~~~~~s~dg~~l~~~~~~~  379 (790)
                        .+|        .|.++++.+++...               ......+.....  .+.. +.|+||++.|+..+.++
T Consensus       350 --~dg--------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~dg  416 (425)
T 1r5m_A          350 --MDG--------QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFD-LSWNCAGNKISVAYSLQ  416 (425)
T ss_dssp             --TTS--------CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEE-EEECTTSSEEEEEESSS
T ss_pred             --CCC--------eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEE-EEccCCCceEEEEecCc
Confidence              355        57888876442000               000223333322  4444 88999999887777664

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.01  E-value=1.8e-08  Score=108.19  Aligned_cols=257  Identities=10%  Similarity=0.088  Sum_probs=134.3

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCc-ceeEeeeecccceeEEEE
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANE-SVVAAWVNRVQNRARITR   87 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~-~~~~~~~~r~~~~~~~~~   87 (790)
                      ....+.|||||+.||..+. ++...+|.+.......    ........+...+..+.|+++ +..+.-...   .-.+.+
T Consensus        69 ~v~~~~~s~~~~~l~~~~~-dg~v~vw~~~~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~v~i  140 (416)
T 2pm9_A           69 KFNDLDWSHNNKIIAGALD-NGSLELYSTNEANNAI----NSMARFSNHSSSVKTVKFNAKQDNVLASGGN---NGEIFI  140 (416)
T ss_dssp             CEEEEEECSSSSCEEEEES-SSCEEEECCSSTTSCC----CEEEECCCSSSCCCEEEECSSSTTBEEEECS---SSCEEB
T ss_pred             ceEEEEECCCCCeEEEEcc-CCeEEEeecccccccc----cchhhccCCccceEEEEEcCCCCCEEEEEcC---CCeEEE
Confidence            4467889999999987654 6667777665421110    011111222223344567665 333322221   123556


Q ss_pred             eeCCCCe------eeEEEe-ecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCc
Q psy463           88 CSINEGT------CDVVFS-RDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV  160 (790)
Q Consensus        88 ~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~  160 (790)
                      ++..++.      ...... .....   .......|+|+|..++++...++            .|.++++.+++     .
T Consensus       141 wd~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~~~dg------------~v~iwd~~~~~-----~  200 (416)
T 2pm9_A          141 WDMNKCTESPSNYTPLTPGQSMSSV---DEVISLAWNQSLAHVFASAGSSN------------FASIWDLKAKK-----E  200 (416)
T ss_dssp             CBTTTTSSCTTTCCCBCCCCSCCSS---CCCCEEEECSSCTTEEEEESSSS------------CEEEEETTTTE-----E
T ss_pred             EECCCCccccccccccccccccCCC---CCeeEEEeCCCCCcEEEEEcCCC------------CEEEEECCCCC-----c
Confidence            6665554      111110 00001   11234689999655555543332            68888987763     1


Q ss_pred             ceeccccc-----eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeeh
Q psy463          161 PVPLTRGR-----FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI  235 (790)
Q Consensus       161 ~~~lt~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~  235 (790)
                      ...+....     .....-+.|++++.. +++....   ++     ....|.++|+.++..     +.....        
T Consensus       201 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~---d~-----~~~~i~~~d~~~~~~-----~~~~~~--------  258 (416)
T 2pm9_A          201 VIHLSYTSPNSGIKQQLSVVEWHPKNST-RVATATG---SD-----NDPSILIWDLRNANT-----PLQTLN--------  258 (416)
T ss_dssp             EEEECCCCCSSCCCCCEEEEEECSSCTT-EEEEEEC---CS-----SSCCCCEEETTSTTS-----CSBCCC--------
T ss_pred             ceEEeccccccccCCceEEEEECCCCCC-EEEEEEC---CC-----CCceEEEEeCCCCCC-----CcEEee--------
Confidence            22222210     122333467776543 3333221   10     002778888877531     211110        


Q ss_pred             hhcccCCCCCCCEEEEEEEcc-CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEE
Q psy463          236 LAWDEKENNVEPVLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLI  314 (790)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~  314 (790)
                             ......+..+.|+| ||++++....+.   .|.++++.++++...+...  ..   ......|+|||+.++++
T Consensus       259 -------~~~~~~v~~~~~s~~~~~~l~s~~~dg---~v~~wd~~~~~~~~~~~~~--~~---~v~~~~~s~~~~~~l~s  323 (416)
T 2pm9_A          259 -------QGHQKGILSLDWCHQDEHLLLSSGRDN---TVLLWNPESAEQLSQFPAR--GN---WCFKTKFAPEAPDLFAC  323 (416)
T ss_dssp             -------SCCSSCEEEEEECSSCSSCEEEEESSS---EEEEECSSSCCEEEEEECS--SS---CCCCEEECTTCTTEEEE
T ss_pred             -------cCccCceeEEEeCCCCCCeEEEEeCCC---CEEEeeCCCCccceeecCC--CC---ceEEEEECCCCCCEEEE
Confidence                   02345678999999 888555544332   3889999888765444321  11   24579999999444435


Q ss_pred             EccccccCCCCCcCcccEEEEEEcCCCC
Q psy463          315 LSHNQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       315 ~~~~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                      .+    .+|        .|.++++.+++
T Consensus       324 ~~----~d~--------~i~iw~~~~~~  339 (416)
T 2pm9_A          324 AS----FDN--------KIEVQTLQNLT  339 (416)
T ss_dssp             CC----SSS--------EEEEEESCCCC
T ss_pred             Ee----cCC--------cEEEEEccCCC
Confidence            55    455        68888887654

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.01  E-value=3.2e-08  Score=103.16  Aligned_cols=246  Identities=9%  Similarity=0.053  Sum_probs=142.0

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      ...+.||||++ |+ +...++.+.+|.+......    .........+...+..+.|++++..+.-....   -.+.+++
T Consensus        85 v~~~~~s~d~~-l~-~~s~dg~v~lWd~~~~~~~----~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd  155 (344)
T 4gqb_B           85 VADLTWVGERG-IL-VASDSGAVELWELDENETL----IVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWD  155 (344)
T ss_dssp             EEEEEEETTTE-EE-EEETTSEEEEEEECTTSSC----EEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEE
T ss_pred             EEEEEEeCCCe-EE-EEECCCEEEEEeccCCCce----eEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEE
Confidence            46788999975 55 4556788888877542210    00000111223345567788877755443332   2467788


Q ss_pred             CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecc-ccc
Q psy463           90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT-RGR  168 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt-~~~  168 (790)
                      ..++++...+..+...  +   ....|+|+++.++.+...++            .|.++|+.+++     ....+. ...
T Consensus       156 ~~~~~~~~~~~~h~~~--V---~~~~~~~~~~~~l~s~s~D~------------~v~iwd~~~~~-----~~~~~~~~~~  213 (344)
T 4gqb_B          156 LAQQVVLSSYRAHAAQ--V---TCVAASPHKDSVFLSCSEDN------------RILLWDTRCPK-----PASQIGCSAP  213 (344)
T ss_dssp             TTTTEEEEEECCCSSC--E---EEEEECSSCTTEEEEEETTS------------CEEEEETTSSS-----CEEECC----
T ss_pred             CCCCcEEEEEcCcCCc--e---EEEEecCCCCCceeeecccc------------ccccccccccc-----eeeeeeccee
Confidence            8888776655433221  1   23588999988776654443            68888987764     222232 111


Q ss_pred             eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463          169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV  248 (790)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~  248 (790)
                      .....-+.|.++++.  ++++..          ....|.++|+.+++.     ...+.                 .....
T Consensus       214 ~~~~~~~~~~p~~~~--~l~sg~----------~dg~v~~wd~~~~~~-----~~~~~-----------------~h~~~  259 (344)
T 4gqb_B          214 GYLPTSLAWHPQQSE--VFVFGD----------ENGTVSLVDTKSTSC-----VLSSA-----------------VHSQC  259 (344)
T ss_dssp             CCCEEEEEECSSCTT--EEEEEE----------TTSEEEEEESCC--C-----CEEEE-----------------CCSSC
T ss_pred             eccceeeeecCCCCc--ceEEec----------cCCcEEEEECCCCcE-----EEEEc-----------------CCCCC
Confidence            122233566666554  222221          115788889887753     22333                 45566


Q ss_pred             EEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          249 LSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       249 ~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      +..+.|||||. +++....+.   .|.+.|+.++++..+.   +..++   ....+|||||+.++.+.+    .+|    
T Consensus       260 v~~v~fsp~g~~~lasgs~D~---~i~vwd~~~~~~~~~~---~H~~~---V~~v~~sp~~~~llas~s----~D~----  322 (344)
T 4gqb_B          260 VTGLVFSPHSVPFLASLSEDC---SLAVLDSSLSELFRSQ---AHRDF---VRDATWSPLNHSLLTTVG----WDH----  322 (344)
T ss_dssp             EEEEEECSSSSCCEEEEETTS---CEEEECTTCCEEEEEC---CCSSC---EEEEEECSSSTTEEEEEE----TTS----
T ss_pred             EEEEEEccCCCeEEEEEeCCC---eEEEEECCCCcEEEEc---CCCCC---EEEEEEeCCCCeEEEEEc----CCC----
Confidence            88999999996 565544432   2888899888754332   22222   447899999998775666    466    


Q ss_pred             CcccEEEEEEcCCC
Q psy463          328 DSWDHLTFIDLDDQ  341 (790)
Q Consensus       328 ~~~~~l~~~d~~~~  341 (790)
                          .|.++++.+.
T Consensus       323 ----~v~~w~v~~~  332 (344)
T 4gqb_B          323 ----QVVHHVVPTE  332 (344)
T ss_dssp             ----CEEEEECCC-
T ss_pred             ----eEEEEECCCC
Confidence                4777777654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.01  E-value=3.7e-07  Score=93.67  Aligned_cols=285  Identities=15%  Similarity=0.174  Sum_probs=159.6

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...++.|||||++||..+ .++...+|.+.  .+.      .......+...+..+.|++++..+.-....   -.+.++
T Consensus        25 ~v~~~~~s~~~~~l~s~~-~dg~i~iw~~~--~~~------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vw   92 (312)
T 4ery_A           25 AVSSVKFSPNGEWLASSS-ADKLIKIWGAY--DGK------FEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIW   92 (312)
T ss_dssp             CEEEEEECTTSSEEEEEE-TTSCEEEEETT--TCC------EEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEE
T ss_pred             cEEEEEECCCCCEEEEee-CCCeEEEEeCC--Ccc------cchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEE
Confidence            346788999999998765 46666666543  232      111122222334456787777655443332   356778


Q ss_pred             eCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc
Q psy463           89 SINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR  168 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~  168 (790)
                      +..++++...+......     .....|+|+|+.|+..+ .+            +.|.++|+.+++     ....+....
T Consensus        93 d~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~s~~-~d------------~~i~iwd~~~~~-----~~~~~~~~~  149 (312)
T 4ery_A           93 DVSSGKCLKTLKGHSNY-----VFCCNFNPQSNLIVSGS-FD------------ESVRIWDVKTGK-----CLKTLPAHS  149 (312)
T ss_dssp             ETTTCCEEEEEECCSSC-----EEEEEECSSSSEEEEEE-TT------------SCEEEEETTTCC-----EEEEECCCS
T ss_pred             ECCCCcEEEEEcCCCCC-----EEEEEEcCCCCEEEEEe-CC------------CcEEEEECCCCE-----EEEEecCCC
Confidence            88777766544432211     12357899999776533 22            268888987763     223333333


Q ss_pred             eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463          169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV  248 (790)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~  248 (790)
                      ..+. -..|++++.  +++...           ....|.++|+.+++..     ..+.                ......
T Consensus       150 ~~v~-~~~~~~~~~--~l~~~~-----------~d~~i~~wd~~~~~~~-----~~~~----------------~~~~~~  194 (312)
T 4ery_A          150 DPVS-AVHFNRDGS--LIVSSS-----------YDGLCRIWDTASGQCL-----KTLI----------------DDDNPP  194 (312)
T ss_dssp             SCEE-EEEECTTSS--EEEEEE-----------TTSCEEEEETTTCCEE-----EEEC----------------CSSCCC
T ss_pred             CcEE-EEEEcCCCC--EEEEEe-----------CCCcEEEEECCCCcee-----eEEe----------------ccCCCc
Confidence            2332 345666554  333222           1257888888776521     1111                022345


Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEc-cCCCEEEEEEccccccCCCCCc
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFS-SDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~s-pDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      +..+.|+|||++++....+.   .|.++|+.++++...........+   .-...++ ++|+.|+ +.+    .+|    
T Consensus       195 ~~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~-sg~----~dg----  259 (312)
T 4ery_A          195 VSFVKFSPNGKYILAATLDN---TLKLWDYSKGKCLKTYTGHKNEKY---CIFANFSVTGGKWIV-SGS----EDN----  259 (312)
T ss_dssp             EEEEEECTTSSEEEEEETTT---EEEEEETTTTEEEEEECSSCCSSS---CCCEEEECSSSCEEE-ECC----TTS----
T ss_pred             eEEEEECCCCCEEEEEcCCC---eEEEEECCCCcEEEEEEecCCceE---EEEEEEEeCCCcEEE-EEC----CCC----
Confidence            67899999999655554332   388999988876544432111101   1133455 5566554 554    455    


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~  389 (790)
                          .|.++|+.+++     ....+..+...+.. ++|+|+++.++..+...+ +...+|..
T Consensus       260 ----~i~vwd~~~~~-----~~~~~~~h~~~v~~-~~~~p~~~~l~s~~~~~d-~~i~~W~~  310 (312)
T 4ery_A          260 ----LVYIWNLQTKE-----IVQKLQGHTDVVIS-TACHPTENIIASAALEND-KTIKLWKS  310 (312)
T ss_dssp             ----CEEEEETTTCC-----EEEEECCCSSCEEE-EEECSSSSEEEEEECTTT-CCEEEEEC
T ss_pred             ----EEEEEECCCch-----hhhhhhccCCcEEE-EeecCcCCceEEEEccCC-ccEEEecC
Confidence                68999998776     23445544444444 789999997776653211 12566653

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.01  E-value=5.8e-08  Score=100.21  Aligned_cols=179  Identities=13%  Similarity=0.186  Sum_probs=113.7

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|.+.|+.+++.     ...+.                 ........+.|+|||++++......   .+.++++.+++.
T Consensus       102 ~~i~lWd~~~~~~-----~~~~~-----------------~~~~~~~~~~~spdg~~l~~g~~dg---~v~i~~~~~~~~  156 (321)
T 3ow8_A          102 AHIRLWDLENGKQ-----IKSID-----------------AGPVDAWTLAFSPDSQYLATGTHVG---KVNIFGVESGKK  156 (321)
T ss_dssp             SEEEEEETTTTEE-----EEEEE-----------------CCTTCCCCEEECTTSSEEEEECTTS---EEEEEETTTCSE
T ss_pred             CcEEEEECCCCCE-----EEEEe-----------------CCCccEEEEEECCCCCEEEEEcCCC---cEEEEEcCCCce
Confidence            5788888887653     12222                 2233345689999999666554332   388889988876


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEE
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL  363 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~  363 (790)
                      .......  ...   .....|+|||+.|+ +.+    .+|        .|.++|+.+++     ....+......+.. +
T Consensus       157 ~~~~~~~--~~~---v~~~~~spdg~~la-sg~----~dg--------~i~iwd~~~~~-----~~~~~~~h~~~v~~-l  212 (321)
T 3ow8_A          157 EYSLDTR--GKF---ILSIAYSPDGKYLA-SGA----IDG--------IINIFDIATGK-----LLHTLEGHAMPIRS-L  212 (321)
T ss_dssp             EEEEECS--SSC---EEEEEECTTSSEEE-EEE----TTS--------CEEEEETTTTE-----EEEEECCCSSCCCE-E
T ss_pred             eEEecCC--Cce---EEEEEECCCCCEEE-EEc----CCC--------eEEEEECCCCc-----EEEEEcccCCceeE-E
Confidence            5444322  111   34689999999887 554    455        58899998776     23445544444554 8


Q ss_pred             eeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEE
Q psy463          364 AWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLF  442 (790)
Q Consensus       364 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~  442 (790)
                      +|+||++.|+..+.++     .|...++..  ++. ..+.       +....+..+.|+||+++++.....   ..|.++
T Consensus       213 ~~spd~~~l~s~s~dg-----~i~iwd~~~--~~~~~~~~-------~h~~~v~~~~~sp~~~~l~s~s~D---~~v~iw  275 (321)
T 3ow8_A          213 TFSPDSQLLVTASDDG-----YIKIYDVQH--ANLAGTLS-------GHASWVLNVAFCPDDTHFVSSSSD---KSVKVW  275 (321)
T ss_dssp             EECTTSCEEEEECTTS-----CEEEEETTT--CCEEEEEC-------CCSSCEEEEEECTTSSEEEEEETT---SCEEEE
T ss_pred             EEcCCCCEEEEEcCCC-----eEEEEECCC--cceeEEEc-------CCCCceEEEEECCCCCEEEEEeCC---CcEEEE
Confidence            8999999776665553     345556554  222 1222       145567889999999988655433   348888


Q ss_pred             ecCCCe
Q psy463          443 DKTGQR  448 (790)
Q Consensus       443 ~~~~~~  448 (790)
                      |+.+++
T Consensus       276 d~~~~~  281 (321)
T 3ow8_A          276 DVGTRT  281 (321)
T ss_dssp             ETTTTE
T ss_pred             eCCCCE
Confidence            887654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.00  E-value=7.6e-08  Score=101.03  Aligned_cols=255  Identities=10%  Similarity=0.153  Sum_probs=135.3

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      .+|||||+.|+-.+....   ..+    -..+++++..++.... ............+. -+.|.+++.  ++..+.   
T Consensus        48 v~fSpDG~~las~s~d~~---~~w----d~~v~~~~~~~~~~~~-~~~~~~~~~~~~V~-~~~~s~d~~--~l~~s~---  113 (357)
T 4g56_B           48 VRYRRDGALLLAASSLSS---RTW----GGSIWVFKDPEGAPNE-SLCTAGVQTEAGVT-DVAWVSEKG--ILVASD---  113 (357)
T ss_dssp             EEECSSSCEEEEEECSSS---SSC----CEEEEEESSCC---CG-GGCSEEEECSSCEE-EEEEETTTE--EEEEET---
T ss_pred             EEECCCCCEEEEEcCCCC---ccc----cCeEEEEECCCCCcce-eEecccCCCCCCEE-EEEEcCCCC--EEEEEC---
Confidence            489999998775442111   000    1368888876653111 01111111222233 246777643  332221   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                               ...|.+.|+.+++..... .....                 .....+..++|+|||++++....+.   .|
T Consensus       114 ---------dg~v~lWd~~~~~~~~~~-~~~~~-----------------~h~~~V~~v~~spdg~~l~sgs~dg---~v  163 (357)
T 4g56_B          114 ---------SGAVELWEILEKESLLVN-KFAKY-----------------EHDDIVKTLSVFSDGTQAVSGGKDF---SV  163 (357)
T ss_dssp             ---------TSCEEEC--------CCC-CEEEC-----------------CCSSCEEEEEECSSSSEEEEEETTS---CE
T ss_pred             ---------CCEEEEeeccccceeEEE-eeccC-----------------CCCCCEEEEEECCCCCEEEEEeCCC---eE
Confidence                     145666677766532110 00111                 3355688999999999666554433   28


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      .+.|+.++++...+...  ..   ......|+|+++.+++..+    .+|        .|.++|+.+++     ....+.
T Consensus       164 ~iwd~~~~~~~~~~~~h--~~---~v~~v~~s~~~~~~~~s~~----~dg--------~v~~wd~~~~~-----~~~~~~  221 (357)
T 4g56_B          164 KVWDLSQKAVLKSYNAH--SS---EVNCVAACPGKDTIFLSCG----EDG--------RILLWDTRKPK-----PATRID  221 (357)
T ss_dssp             EEEETTTTEEEEEECCC--SS---CEEEEEECTTCSSCEEEEE----TTS--------CEEECCTTSSS-----CBCBCC
T ss_pred             EEEECCCCcEEEEEcCC--CC---CEEEEEEccCCCceeeeec----cCC--------ceEEEECCCCc-----eeeeee
Confidence            88999988766544321  11   1346889999986664555    456        58888988776     122222


Q ss_pred             --CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          354 --RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       354 --~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                        .....+.. ++|+|++..++..+...    ..|...++..  ++. ..+.       .....+..+.|||+++.++++
T Consensus       222 ~~~~~~~v~~-v~~sp~~~~~la~g~~d----~~i~~wd~~~--~~~~~~~~-------~~~~~v~~l~~sp~~~~~las  287 (357)
T 4g56_B          222 FCASDTIPTS-VTWHPEKDDTFACGDET----GNVSLVNIKN--PDSAQTSA-------VHSQNITGLAYSYHSSPFLAS  287 (357)
T ss_dssp             CTTCCSCEEE-EEECTTSTTEEEEEESS----SCEEEEESSC--GGGCEEEC-------CCSSCEEEEEECSSSSCCEEE
T ss_pred             eccccccccc-hhhhhcccceEEEeecc----cceeEEECCC--CcEeEEEe-------ccceeEEEEEEcCCCCCEEEE
Confidence              22223333 78999876555544332    3455566655  322 2222       145577889999998655554


Q ss_pred             eecCCCCeEEEEecCCCeEE
Q psy463          431 CIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       431 ~~~~~~~~i~~~~~~~~~~~  450 (790)
                      .+..  ..|+++|+++++..
T Consensus       288 gs~D--~~i~iwd~~~~~~~  305 (357)
T 4g56_B          288 ISED--CTVAVLDADFSEVF  305 (357)
T ss_dssp             EETT--SCEEEECTTSCEEE
T ss_pred             EeCC--CEEEEEECCCCcEe
Confidence            4332  35888888776544

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=98.98  E-value=1.2e-07  Score=100.38  Aligned_cols=287  Identities=15%  Similarity=0.123  Sum_probs=150.0

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...++.|||||++||-.+ .++...+|.+..  +.      .......+...+..+.|++++..+.-....   ..+.++
T Consensus        68 ~V~~~~~sp~~~~l~s~s-~D~~v~iWd~~~--~~------~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw  135 (380)
T 3iz6_a           68 KVYSLDWTPEKNWIVSAS-QDGRLIVWNALT--SQ------KTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIF  135 (380)
T ss_dssp             CEEEEEECTTSSCEEEEE-TTSEEEEEETTT--TE------EEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEE
T ss_pred             EEEEEEEcCCCCEEEEEe-CCCeEEEEECCC--Cc------cceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEE
Confidence            446788999999998765 466777775432  21      111223333344455677666544322211   122333


Q ss_pred             eCCCCee-------eEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcc
Q psy463           89 SINEGTC-------DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  161 (790)
Q Consensus        89 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~  161 (790)
                      +..+...       ...+..+  .+.   .....|+|++...+++.+.++            .|.++|+.++.     ..
T Consensus       136 ~~~~~~~~~~~~~~~~~~~gh--~~~---v~~~~~~~~~~~~l~s~s~D~------------~i~~wd~~~~~-----~~  193 (380)
T 3iz6_a          136 NLSSQADRDGNMPVSRVLTGH--KGY---ASSCQYVPDQETRLITGSGDQ------------TCVLWDVTTGQ-----RI  193 (380)
T ss_dssp             ECCCCSSCCCSSTTCCBCCCC--SSC---CCCCBCCSSSSSCEEEECTTS------------CEEEECTTTCC-----EE
T ss_pred             ECCCCccccCCccceeeccCC--Ccc---eEEEEEecCCCCEEEEECCCC------------cEEEEEcCCCc-----EE
Confidence            3322110       0000000  111   123478888766555554333            68888887763     11


Q ss_pred             eec-----cccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCc-ccccCcCCccccccccceeeh
Q psy463          162 VPL-----TRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQ-AGIKDKVPVPLTRGRFTVTEI  235 (790)
Q Consensus       162 ~~l-----t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~lt~~~~~~~~~  235 (790)
                      ..+     ......+.. ..+++.++.  ++++..          ....|.+.|+... +.     ...+.         
T Consensus       194 ~~~~~~~~~~h~~~v~~-~~~~~~~~~--~l~sgs----------~D~~v~~wd~~~~~~~-----~~~~~---------  246 (380)
T 3iz6_a          194 SIFGSEFPSGHTADVLS-LSINSLNAN--MFISGS----------CDTTVRLWDLRITSRA-----VRTYH---------  246 (380)
T ss_dssp             EEECCCSSSSCCSCEEE-EEECSSSCC--EEEEEE----------TTSCEEEEETTTTCCC-----CEEEC---------
T ss_pred             EEeecccCCCCccCeEE-EEeecCCCC--EEEEEE----------CCCeEEEEECCCCCcc-----eEEEC---------
Confidence            111     111122222 233332322  233221          1146777777532 21     11222         


Q ss_pred             hhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC--cccccCCceeEccCCCEEEE
Q psy463          236 LAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR--GWFEPFDHLRFSSDGKKMLL  313 (790)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~--~~~~~~~~~~~spDg~~i~~  313 (790)
                              .....+..+.|+|||+.++....+..   |.+.|+.++.+...+......  .........+|||||+.|+ 
T Consensus       247 --------~h~~~v~~v~~~p~~~~l~s~s~D~~---i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-  314 (380)
T 3iz6_a          247 --------GHEGDINSVKFFPDGQRFGTGSDDGT---CRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLF-  314 (380)
T ss_dssp             --------CCSSCCCEEEECTTSSEEEEECSSSC---EEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE-
T ss_pred             --------CcCCCeEEEEEecCCCeEEEEcCCCe---EEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEE-
Confidence                    34556778999999996665544332   899999998776555432110  0111245789999999877 


Q ss_pred             EEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc----cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463          314 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL----TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l----t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~  389 (790)
                      ..+    .+|        .|+++|+..++.     ...+    ..+...+.. ++|+|||+.|+-.+.++.   ..||.+
T Consensus       315 ~g~----~dg--------~i~vwd~~~~~~-----~~~~~~~~~~h~~~v~~-l~~s~dg~~l~sgs~D~~---i~iW~~  373 (380)
T 3iz6_a          315 AGY----SNG--------DCYVWDTLLAEM-----VLNLGTLQNSHEGRISC-LGLSSDGSALCTGSWDKN---LKIWAF  373 (380)
T ss_dssp             EEC----TTS--------CEEEEETTTCCE-----EEEECCSCSSCCCCCCE-EEECSSSSEEEEECTTSC---EEEEEC
T ss_pred             EEE----CCC--------CEEEEECCCCce-----EEEEecccCCCCCceEE-EEECCCCCEEEEeeCCCC---EEEEec
Confidence            554    456        688999876651     2222    222333444 789999998776665543   555543

>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A

Probab=98.96  E-value=1e-08  Score=102.90  Aligned_cols=106  Identities=19%  Similarity=0.146  Sum_probs=63.0

Q ss_pred             EEEEEcCCCCccccccccccchHHHHHhcC--CeEEEEEcCCCCCCChhhhHhhhhccCCccchhHH-HHHHHHHHHhCC
Q psy463          503 LLIHVYGGPSSFQVTERFSVDWNLYLADNK--DIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQ-INVTRYLQENLP  579 (790)
Q Consensus       503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~-~~~~~~l~~~~~  579 (790)
                      .||++||..++..-...|..  ....+++.  |+.|+++|+ |++.+.....  .+.    ..+.+. .+.++.+.. ..
T Consensus         7 pvVllHG~~~~~~~~~~~~~--~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~--~~~----~~~~~~~~~~~~~l~~-~~   76 (279)
T 1ei9_A            7 PLVIWHGMGDSCCNPLSMGA--IKKMVEKKIPGIHVLSLEI-GKTLREDVEN--SFF----LNVNSQVTTVCQILAK-DP   76 (279)
T ss_dssp             CEEEECCTTCCSCCTTTTHH--HHHHHHHHSTTCCEEECCC-SSSHHHHHHH--HHH----SCHHHHHHHHHHHHHS-CG
T ss_pred             cEEEECCCCCCCCCcccHHH--HHHHHHHHCCCcEEEEEEe-CCCCcccccc--ccc----cCHHHHHHHHHHHHHh-hh
Confidence            38899998765310023332  23333322  889999997 8664322111  110    122333 333333332 22


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      .. .+++.++||||||.++..++.++|...++.+|..++.
T Consensus        77 ~l-~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p  115 (279)
T 1ei9_A           77 KL-QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ  115 (279)
T ss_dssp             GG-TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred             hc-cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCc
Confidence            12 2689999999999999999999986458888877654

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=98.96  E-value=1.2e-07  Score=99.88  Aligned_cols=171  Identities=14%  Similarity=0.111  Sum_probs=103.7

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ..+.+...++|||||++++..... ....|.+.|+.++++........      .....+|||||+.|+ +.+     ++
T Consensus       131 ~~~~~~~~v~fSpDg~~la~as~~-~d~~i~iwd~~~~~~~~~~~~~~------~V~~v~fspdg~~l~-s~s-----~~  197 (365)
T 4h5i_A          131 NADDYTKLVYISREGTVAAIASSK-VPAIMRIIDPSDLTEKFEIETRG------EVKDLHFSTDGKVVA-YIT-----GS  197 (365)
T ss_dssp             CTTCCEEEEEECTTSSCEEEEESC-SSCEEEEEETTTTEEEEEEECSS------CCCEEEECTTSSEEE-EEC-----SS
T ss_pred             CcccCEEEEEEcCCCCEEEEEECC-CCCEEEEeECCCCcEEEEeCCCC------ceEEEEEccCCceEE-ecc-----ce
Confidence            345567789999999954443221 12348889999988765554321      145899999999887 454     12


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCccc--ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVP--LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~--lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                              .+.+++..+++     ....  .......+.. ++|+|||+.++..+.++.. ...++..++..  .....+
T Consensus       198 --------~~~~~~~~~~~-----~~~~~~~~~~~~~v~~-v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~--~~~~~~  260 (365)
T 4h5i_A          198 --------SLEVISTVTGS-----CIARKTDFDKNWSLSK-INFIADDTVLIAASLKKGK-GIVLTKISIKS--GNTSVL  260 (365)
T ss_dssp             --------CEEEEETTTCC-----EEEEECCCCTTEEEEE-EEEEETTEEEEEEEESSSC-CEEEEEEEEET--TEEEEE
T ss_pred             --------eEEEEEeccCc-----ceeeeecCCCCCCEEE-EEEcCCCCEEEEEecCCcc-eeEEeeccccc--ceecce
Confidence                    35667766554     1222  2223444544 8899999988877766331 13455555543  221111


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      ...  .+.+....+..+.|||||++|+.....   ..|.++|+.+++.
T Consensus       261 ~~~--~~~~~~~~V~~~~~Spdg~~lasgs~D---~~V~iwd~~~~~~  303 (365)
T 4h5i_A          261 RSK--QVTNRFKGITSMDVDMKGELAVLASND---NSIALVKLKDLSM  303 (365)
T ss_dssp             EEE--EEESSCSCEEEEEECTTSCEEEEEETT---SCEEEEETTTTEE
T ss_pred             eee--eecCCCCCeEeEEECCCCCceEEEcCC---CEEEEEECCCCcE
Confidence            000  011144567889999999998776543   3488999877654

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=98.96  E-value=5.3e-07  Score=92.90  Aligned_cols=287  Identities=10%  Similarity=0.065  Sum_probs=154.7

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...++.|||++..+..+...++...+|.+.......   .........+...+..+.|++++..+.-...   ...+.++
T Consensus        19 ~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~---~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~---D~~v~~w   92 (319)
T 3frx_A           19 WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF---GVPVRSFKGHSHIVQDCTLTADGAYALSASW---DKTLRLW   92 (319)
T ss_dssp             CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEE---EEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSEEEEE
T ss_pred             eEEEEEccCCCccEEEEecCCccEEEecCCCCCccc---cccceEEeCCcccEEEEEECCCCCEEEEEeC---CCEEEEE
Confidence            346788999886666666778888888775432210   0001112223334455567776665433332   2457788


Q ss_pred             eCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc
Q psy463           89 SINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR  168 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~  168 (790)
                      +..++++...+......     .....|+|+|+.|+-.+ .++            .|.++++.+..      ...+....
T Consensus        93 d~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~s~s-~D~------------~i~vwd~~~~~------~~~~~~h~  148 (319)
T 3frx_A           93 DVATGETYQRFVGHKSD-----VMSVDIDKKASMIISGS-RDK------------TIKVWTIKGQC------LATLLGHN  148 (319)
T ss_dssp             ETTTTEEEEEEECCSSC-----EEEEEECTTSCEEEEEE-TTS------------CEEEEETTSCE------EEEECCCS
T ss_pred             ECCCCCeeEEEccCCCc-----EEEEEEcCCCCEEEEEe-CCC------------eEEEEECCCCe------EEEEeccC
Confidence            88888766544433211     12357899998776433 222            56667765431      22222222


Q ss_pred             eEEEEEEeeeccCC---ccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCC
Q psy463          169 FTVTEILAWDEREN---NPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNV  245 (790)
Q Consensus       169 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~  245 (790)
                      ..+..+ .+.+...   +..++++..          ....|.+.|+.+++.     ...+.                 ..
T Consensus       149 ~~v~~~-~~~~~~~~~~~~~~l~s~~----------~d~~i~~wd~~~~~~-----~~~~~-----------------~h  195 (319)
T 3frx_A          149 DWVSQV-RVVPNEKADDDSVTIISAG----------NDKMVKAWNLNQFQI-----EADFI-----------------GH  195 (319)
T ss_dssp             SCEEEE-EECCC------CCEEEEEE----------TTSCEEEEETTTTEE-----EEEEC-----------------CC
T ss_pred             CcEEEE-EEccCCCCCCCccEEEEEe----------CCCEEEEEECCcchh-----heeec-----------------CC
Confidence            222222 2322111   011222221          124667777766542     11222                 34


Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...+..+.|||||++++....+.   .|.+.|+.++++........      ......|||||+.|+ ...    . +  
T Consensus       196 ~~~v~~~~~sp~g~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~------~v~~~~~sp~~~~la-~~~----~-~--  258 (319)
T 3frx_A          196 NSNINTLTASPDGTLIASAGKDG---EIMLWNLAAKKAMYTLSAQD------EVFSLAFSPNRYWLA-AAT----A-T--  258 (319)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTC---EEEEEETTTTEEEEEEECCS------CEEEEEECSSSSEEE-EEE----T-T--
T ss_pred             CCcEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCcEEEEecCCC------cEEEEEEcCCCCEEE-EEc----C-C--
Confidence            55678899999999666654432   38999998887654443221      144789999999887 333    1 2  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccC--------CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTR--------GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~--------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~  390 (790)
                            .+.+++++.+..     ...+..        ....+.. ++|+|||+.|+..+.++.   .+||.+.
T Consensus       259 ------~i~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~-~~~spdg~~l~sg~~Dg~---i~vWd~~  316 (319)
T 3frx_A          259 ------GIKVFSLDPQYL-----VDDLRPEFAGYSKAAEPHAVS-LAWSADGQTLFAGYTDNV---IRVWQVM  316 (319)
T ss_dssp             ------EEEEEEETTEEE-----EEEECCCCTTCCGGGCCCEEE-EEECTTSSEEEEEETTSC---EEEEEEE
T ss_pred             ------CcEEEEeCcCee-----eeccCccccccccCcCcceeE-EEECCCCCEEEEeecCce---EEEEEEe
Confidence                  355666554431     111110        1112333 789999998887776654   6676654

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=98.95  E-value=2.9e-07  Score=94.18  Aligned_cols=269  Identities=12%  Similarity=0.057  Sum_probs=149.0

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...++.|||||++||..+ .++...+|.+..  +.      .......+........|++++..+.-...   .-.+.++
T Consensus        15 ~V~~~~fsp~~~~l~s~~-~dg~v~lWd~~~--~~------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---d~~i~vw   82 (304)
T 2ynn_A           15 RVKGIDFHPTEPWVLTTL-YSGRVELWNYET--QV------EVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRIRVF   82 (304)
T ss_dssp             CEEEEEECSSSSEEEEEE-TTSEEEEEETTT--TE------EEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEEEEE
T ss_pred             ceEEEEECCCCCEEEEEc-CCCcEEEEECCC--Cc------eeEEeeccCCcEEEEEEeCCCCEEEEECC---CCEEEEE
Confidence            456889999999998655 577777776543  21      11112222222334455555544333222   2356778


Q ss_pred             eCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc
Q psy463           89 SINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR  168 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~  168 (790)
                      +..++++...+....+.  +   ....|+|+++.|+-.+ .++            .|.++++.++.    .....+....
T Consensus        83 d~~~~~~~~~~~~h~~~--v---~~~~~~~~~~~l~sgs-~D~------------~v~lWd~~~~~----~~~~~~~~h~  140 (304)
T 2ynn_A           83 NYNTGEKVVDFEAHPDY--I---RSIAVHPTKPYVLSGS-DDL------------TVKLWNWENNW----ALEQTFEGHE  140 (304)
T ss_dssp             ETTTCCEEEEEECCSSC--E---EEEEECSSSSEEEEEE-TTS------------CEEEEEGGGTT----EEEEEECCCC
T ss_pred             ECCCCcEEEEEeCCCCc--E---EEEEEcCCCCEEEEEC-CCC------------eEEEEECCCCc----chhhhhcccC
Confidence            88777766554433221  1   2358999998766322 222            67778876552    1122222222


Q ss_pred             eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463          169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV  248 (790)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~  248 (790)
                      ..+ .-..|+|.++. + +++..          ....|.+.|+..+..     ...+..                .....
T Consensus       141 ~~v-~~v~~~p~~~~-~-l~sgs----------~D~~v~iwd~~~~~~-----~~~~~~----------------~~~~~  186 (304)
T 2ynn_A          141 HFV-MCVAFNPKDPS-T-FASGC----------LDRTVKVWSLGQSTP-----NFTLTT----------------GQERG  186 (304)
T ss_dssp             SCE-EEEEECTTCTT-E-EEEEE----------TTSEEEEEETTCSSC-----SEEEEC----------------CCTTC
T ss_pred             CcE-EEEEECCCCCC-E-EEEEe----------CCCeEEEEECCCCCc-----cceecc----------------CCcCc
Confidence            222 33466664433 2 22221          115677778766542     112210                22344


Q ss_pred             EEEEEEcc--CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          249 LSRVNWAN--ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       249 ~~~~~wsp--Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      +..+.|+|  |+++++....+.   .|.+.|+.++++.......  ...   .....|+|+++.|+ +.+    .+|   
T Consensus       187 v~~~~~~~~~~~~~l~s~s~D~---~i~iWd~~~~~~~~~~~~h--~~~---v~~~~~~p~~~~l~-s~s----~Dg---  250 (304)
T 2ynn_A          187 VNYVDYYPLPDKPYMITASDDL---TIKIWDYQTKSCVATLEGH--MSN---VSFAVFHPTLPIII-SGS----EDG---  250 (304)
T ss_dssp             EEEEEECCSTTCCEEEEEETTS---EEEEEETTTTEEEEEEECC--SSC---EEEEEECSSSSEEE-EEE----TTS---
T ss_pred             EEEEEEEEcCCCCEEEEEcCCC---eEEEEeCCCCccceeeCCC--CCC---EEEEEECCCCCEEE-EEc----CCC---
Confidence            56777876  666655554432   3889999988765444321  111   34688999999776 665    456   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEE
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNV  372 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l  372 (790)
                           .|.++|+.+++     ..+.+..+...+.. ++|+|+++..
T Consensus       251 -----~i~iWd~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~  285 (304)
T 2ynn_A          251 -----TLKIWNSSTYK-----VEKTLNVGLERSWC-IATHPTGRKN  285 (304)
T ss_dssp             -----CEEEEETTTCC-----EEEEECCSSSSEEE-EEECTTCGGG
T ss_pred             -----eEEEEECCCCc-----eeeeccCCCccEEE-EEECCCCCce
Confidence                 58889988776     23445544333333 7788988654

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=98.95  E-value=1.8e-07  Score=106.10  Aligned_cols=291  Identities=9%  Similarity=0.076  Sum_probs=156.6

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCc-cccccCCC--cceeEeeeecccceeE
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPV-LSRVNWAN--ESVVAAWVNRVQNRAR   84 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~w~~--~~~~~~~~~r~~~~~~   84 (790)
                      +...+++|||||++||+.+  ++...+|.+.. |...   .........+... +..+.|++  ++..+.-....   -.
T Consensus        19 ~~v~~~~~spdg~~l~~~~--~~~v~v~~~~~-~~~~---~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~d---g~   89 (615)
T 1pgu_A           19 NFTTHLSYDPTTNAIAYPC--GKSAFVRCLDD-GDSK---VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES---GK   89 (615)
T ss_dssp             TCCCCCEEETTTTEEEEEE--TTEEEEEECCS-SCCS---SCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETT---SE
T ss_pred             CceeEEEECCCCCEEEEec--CCeEEEEECCC-CCCc---cccceEEecCCCceEEEEEECcCCCCCEEEEecCC---CE
Confidence            3457889999999999987  45555665542 2100   0011112223333 45567887  77655433322   23


Q ss_pred             EEEeeCCCC------eeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccC
Q psy463           85 ITRCSINEG------TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD  158 (790)
Q Consensus        85 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~  158 (790)
                      +.+++..++      ....+.........+   ....|+|||+.|+........         ...|++++.  ++    
T Consensus        90 v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~s~~~~~l~~~~~~~~~---------~~~v~~~d~--~~----  151 (615)
T 1pgu_A           90 VIVWGWTFDKESNSVEVNVKSEFQVLAGPI---SDISWDFEGRRLCVVGEGRDN---------FGVFISWDS--GN----  151 (615)
T ss_dssp             EEEEEEEEEGGGTEEEEEEEEEEECCSSCE---EEEEECTTSSEEEEEECCSSC---------SEEEEETTT--CC----
T ss_pred             EEEEeCCCCcccccccccccchhhcccccE---EEEEEeCCCCEEEEeccCCCC---------ccEEEEEEC--CC----
Confidence            555665443      223322222212121   346899999998876643211         236777763  21    


Q ss_pred             CcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhc
Q psy463          159 KVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW  238 (790)
Q Consensus       159 ~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~  238 (790)
                       ....+......+. -..|++++...++..+.            ...|.++++.+++..     ..+.            
T Consensus       152 -~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~------------d~~v~vwd~~~~~~~-----~~~~------------  200 (615)
T 1pgu_A          152 -SLGEVSGHSQRIN-ACHLKQSRPMRSMTVGD------------DGSVVFYQGPPFKFS-----ASDR------------  200 (615)
T ss_dssp             -EEEECCSCSSCEE-EEEECSSSSCEEEEEET------------TTEEEEEETTTBEEE-----EEEC------------
T ss_pred             -cceeeecCCccEE-EEEECCCCCcEEEEEeC------------CCcEEEEeCCCccee-----eeec------------
Confidence             1233333333333 34666665432222211            257888888776521     1222            


Q ss_pred             ccCCCCCCC---EEEEEEEccC-CcEEEEEeccCcceEEEEEECCCCceeEEEEEe--CCCcccccCCceeEccCCCEEE
Q psy463          239 DEKENNVEP---VLSRVNWANE-SVVAAWVNRVQNRARITRCSINEGTCDVVFSRD--LDRGWFEPFDHLRFSSDGKKML  312 (790)
Q Consensus       239 ~~~~~~~~~---~~~~~~wspD-g~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~--~~~~~~~~~~~~~~spDg~~i~  312 (790)
                           ....   .+..+.|+|| |++++....+.   .|.++++.+++........  ...   .......|+ ||+.|+
T Consensus       201 -----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~---~~v~~~~~~-~~~~l~  268 (615)
T 1pgu_A          201 -----THHKQGSFVRDVEFSPDSGEFVITVGSDR---KISCFDGKSGEFLKYIEDDQEPVQ---GGIFALSWL-DSQKFA  268 (615)
T ss_dssp             -----SSSCTTCCEEEEEECSTTCCEEEEEETTC---CEEEEETTTCCEEEECCBTTBCCC---SCEEEEEES-SSSEEE
T ss_pred             -----ccCCCCceEEEEEECCCCCCEEEEEeCCC---eEEEEECCCCCEeEEecccccccC---CceEEEEEc-CCCEEE
Confidence                 2333   6889999999 99665554332   2999999888765444110  111   124478899 999887


Q ss_pred             EEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC----CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463          313 LILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG----RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR  388 (790)
Q Consensus       313 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  388 (790)
                       +.+    .+|        .|.++|+.+++     ....+...    ...+.. ..|+ +++.++..+.++     .|+.
T Consensus       269 -~~~----~d~--------~i~~wd~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~-~~~~l~~~~~~g-----~i~~  323 (615)
T 1pgu_A          269 -TVG----ADA--------TIRVWDVTTSK-----CVQKWTLDKQQLGNQQVG-VVAT-GNGRIISLSLDG-----TLNF  323 (615)
T ss_dssp             -EEE----TTS--------EEEEEETTTTE-----EEEEEECCTTCGGGCEEE-EEEE-ETTEEEEEETTS-----CEEE
T ss_pred             -EEc----CCC--------cEEEEECCCCc-----EEEEEcCCCCcccCceeE-EEeC-CCCeEEEEECCC-----CEEE
Confidence             554    345        68899988765     12223222    112222 4564 788777776653     4555


Q ss_pred             EEcCC
Q psy463          389 INIAD  393 (790)
Q Consensus       389 ~~~~~  393 (790)
                      .++..
T Consensus       324 ~d~~~  328 (615)
T 1pgu_A          324 YELGH  328 (615)
T ss_dssp             EETTE
T ss_pred             EECCC
Confidence            55543

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=98.93  E-value=1.2e-07  Score=99.92  Aligned_cols=178  Identities=8%  Similarity=-0.040  Sum_probs=91.9

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECC-CCceeEEEEEeCCC-cccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSIN-EGTCDVVFSRDLDR-GWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~-~g~~~~l~~~~~~~-~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      .....+.|||||++++.++++.+  .|++++++ +|+.+.+....... +.  ....+.|||||+.|++ ..   +.++ 
T Consensus       145 ~~~~~~~~spdG~~l~~~~~~~~--~v~~~~~~~~g~~~~~~~~~~~~~g~--~p~~~~~spdg~~l~v-~~---~~~~-  215 (365)
T 1jof_A          145 TGIHGMVFDPTETYLYSADLTAN--KLWTHRKLASGEVELVGSVDAPDPGD--HPRWVAMHPTGNYLYA-LM---EAGN-  215 (365)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTT--EEEEEEECTTSCEEEEEEEECSSTTC--CEEEEEECTTSSEEEE-EE---TTTT-
T ss_pred             CcceEEEECCCCCEEEEEcCCCC--EEEEEEECCCCCEEEeeeEecCCCCC--CCCEeEECCCCCEEEE-EE---CCCC-
Confidence            34678999999997776665433  48888887 77765443322100 10  1235799999998874 44   2334 


Q ss_pred             CCcCcccEEEEEEcCCCCccc-CCCcccccCCC---e-------EEeEEEe-eecCCCEEEEEEcCCC---CceEEEEEE
Q psy463          325 TPVDSWDHLTFIDLDDQAGIK-DKVPVPLTRGR---F-------TVTEILA-WDEKENNVYFLSTQGS---PIVQHMYRI  389 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~-~~~~~~lt~~~---~-------~~~~~~~-~s~dg~~l~~~~~~~~---~~~~~l~~~  389 (790)
                           .-.+|.++.++++... ......+..+.   .       ... .++ |+|||+.||......+   +....+|.+
T Consensus       216 -----~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~  289 (365)
T 1jof_A          216 -----RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRA-DVCALTFSGKYMFASSRANKFELQGYIAGFKL  289 (365)
T ss_dssp             -----EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEE-EEEEECTTSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred             -----eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccc-cEEEECCCCCEEEEECCCCCCCCCCeEEEEEE
Confidence                 3344444544554000 00001121110   1       233 378 9999998876543321   112445544


Q ss_pred             EcCCCCCCcceeeecccccCCCcccEEEEEEec---CCcEEEEEeecCCCCeEEEEecCCC
Q psy463          390 NIADPTATPECITCDLLTSANQKCSYSGATFST---NVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       390 ~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~---dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      +. +  ++.+.+...+.   ........+.|||   ||++++......  ..|.+++.+..
T Consensus       290 ~~-~--g~~~~~~~~~~---~~~~~~~~~a~sp~~~dg~~l~v~~~~~--~~v~v~~~~~~  342 (365)
T 1jof_A          290 RD-C--GSIEKQLFLSP---TPTSGGHSNAVSPCPWSDEWMAITDDQE--GWLEIYRWKDE  342 (365)
T ss_dssp             CT-T--SCEEEEEEEEE---CSSCCTTCCCEEECTTCTTEEEEECSSS--CEEEEEEEETT
T ss_pred             CC-C--CCEEEeeeeee---cCCCCcccceecCCCcCCCEEEEEEcCC--CeEEEEEEchh
Confidence            32 2  44443211000   0111223467899   899987664322  45666655443

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=98.92  E-value=4.5e-07  Score=95.18  Aligned_cols=233  Identities=9%  Similarity=0.092  Sum_probs=137.4

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...|+|||+.|+..+. +            +.|.++++.+++     ....+......+.. +.|+++++  .++...  
T Consensus        37 ~~~~s~~~~~l~~~~~-d------------g~i~vwd~~~~~-----~~~~~~~h~~~v~~-~~~~~~~~--~l~s~~--   93 (369)
T 3zwl_B           37 QVKYNKEGDLLFSCSK-D------------SSASVWYSLNGE-----RLGTLDGHTGTIWS-IDVDCFTK--YCVTGS--   93 (369)
T ss_dssp             EEEECTTSCEEEEEES-S------------SCEEEEETTTCC-----EEEEECCCSSCEEE-EEECTTSS--EEEEEE--
T ss_pred             EEEEcCCCCEEEEEeC-C------------CEEEEEeCCCch-----hhhhhhhcCCcEEE-EEEcCCCC--EEEEEe--
Confidence            3588999998775442 2            268888887763     23334433333333 46676554  332222  


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEecc--Ccc
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRV--QNR  270 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~--~~~  270 (790)
                               ....|.++++.+++.      ....                 .....+..+.|+|||+.++.....  ...
T Consensus        94 ---------~dg~i~iwd~~~~~~------~~~~-----------------~~~~~v~~~~~~~~~~~l~~~~~~~~~~~  141 (369)
T 3zwl_B           94 ---------ADYSIKLWDVSNGQC------VATW-----------------KSPVPVKRVEFSPCGNYFLAILDNVMKNP  141 (369)
T ss_dssp             ---------TTTEEEEEETTTCCE------EEEE-----------------ECSSCEEEEEECTTSSEEEEEECCBTTBC
T ss_pred             ---------CCCeEEEEECCCCcE------EEEe-----------------ecCCCeEEEEEccCCCEEEEecCCccCCC
Confidence                     115788889887653      1111                 234457789999999955554432  122


Q ss_pred             eEEEEEECCCCceeE-EEEEe--------CCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC-
Q psy463          271 ARITRCSINEGTCDV-VFSRD--------LDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD-  340 (790)
Q Consensus       271 ~~i~~~~~~~g~~~~-l~~~~--------~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-  340 (790)
                      ..|.++++.++.... +....        ...+ ........|+|||+.|+ +.+    .+|        .|.++|+.+ 
T Consensus       142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~----~dg--------~i~i~d~~~~  207 (369)
T 3zwl_B          142 GSINIYEIERDSATHELTKVSEEPIHKIITHEG-LDAATVAGWSTKGKYII-AGH----KDG--------KISKYDVSNN  207 (369)
T ss_dssp             CEEEEEEEEECTTTCCEEEECSSCSEEEECCTT-CCCEEEEEECGGGCEEE-EEE----TTS--------EEEEEETTTT
T ss_pred             CEEEEEEecCCccceeecccccceeeeccCCcC-ccceeEEEEcCCCCEEE-EEc----CCC--------EEEEEECCCC
Confidence            347777766543211 11110        0000 00234688999999887 444    455        689999876 


Q ss_pred             CCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEE
Q psy463          341 QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATF  420 (790)
Q Consensus       341 ~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~  420 (790)
                      ++     ....+......+.. +.|+||++.|+..+.+     ..|...++..  ++......       ....+..+.|
T Consensus       208 ~~-----~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d-----~~i~v~d~~~--~~~~~~~~-------~~~~~~~~~~  267 (369)
T 3zwl_B          208 YE-----YVDSIDLHEKSISD-MQFSPDLTYFITSSRD-----TNSFLVDVST--LQVLKKYE-------TDCPLNTAVI  267 (369)
T ss_dssp             TE-----EEEEEECCSSCEEE-EEECTTSSEEEEEETT-----SEEEEEETTT--CCEEEEEE-------CSSCEEEEEE
T ss_pred             cE-----eEEEEecCCCceeE-EEECCCCCEEEEecCC-----ceEEEEECCC--Cceeeeec-------CCCCceeEEe
Confidence            33     13334444444554 7899999988777665     4677777765  33322222       3456778999


Q ss_pred             ecCCcEEEEEeecC
Q psy463          421 STNVSYYVLSCIGP  434 (790)
Q Consensus       421 s~dg~~~~~~~~~~  434 (790)
                      +|++++++......
T Consensus       268 ~~~~~~l~~~~~~~  281 (369)
T 3zwl_B          268 TPLKEFIILGGGQE  281 (369)
T ss_dssp             CSSSSEEEEEECCC
T ss_pred             cCCCceEEEeecCC
Confidence            99999988775443

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=98.91  E-value=5.1e-07  Score=95.67  Aligned_cols=162  Identities=9%  Similarity=0.082  Sum_probs=91.4

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCC----CceeEEEEEeCCCcccccCCceeEcc-CCCEEEEEEcc
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINE----GTCDVVFSRDLDRGWFEPFDHLRFSS-DGKKMLLILSH  317 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~----g~~~~l~~~~~~~~~~~~~~~~~~sp-Dg~~i~~~~~~  317 (790)
                      .....+..+.|+|||+ +++....+.   .|.++|+.+    +.+......   ..   ....+.|+| ||+.|+ +.+ 
T Consensus       202 ~h~~~v~~~~~~~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~---~~---~v~~~~~s~~~~~~l~-~~~-  270 (383)
T 3ei3_B          202 LHKAKVTHAEFNPRCDWLMATSSVDA---TVKLWDLRNIKDKNSYIAEMPH---EK---PVNAAYFNPTDSTKLL-TTD-  270 (383)
T ss_dssp             CSSSCEEEEEECSSCTTEEEEEETTS---EEEEEEGGGCCSTTCEEEEEEC---SS---CEEEEEECTTTSCEEE-EEE-
T ss_pred             cCCCcEEEEEECCCCCCEEEEEeCCC---EEEEEeCCCCCcccceEEEecC---CC---ceEEEEEcCCCCCEEE-EEc-
Confidence            4456788999999999 666655433   388888887    333333321   11   245789999 999887 454 


Q ss_pred             ccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC-------CeEEeEEEeeecCCCEEEEEEcC-C---CCceEEE
Q psy463          318 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-------RFTVTEILAWDEKENNVYFLSTQ-G---SPIVQHM  386 (790)
Q Consensus       318 ~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-------~~~~~~~~~~s~dg~~l~~~~~~-~---~~~~~~l  386 (790)
                         .+|        .|.++|+.+++.     ...+...       ...+.  ..|+|++..+...... +   ......|
T Consensus       271 ---~d~--------~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~s~dg~~s~s~d~~i  332 (383)
T 3ei3_B          271 ---QRN--------EIRVYSSYDWSK-----PDQIIIHPHRQFQHLTPIK--ATWHPMYDLIVAGRYPDDQLLLNDKRTI  332 (383)
T ss_dssp             ---SSS--------EEEEEETTBTTS-----CSEEEECCBCCCTTSCCCC--CEECSSSSEEEEECBCCTTTCTTCCCCE
T ss_pred             ---CCC--------cEEEEECCCCcc-----ccccccccccccccccceE--EeccCCCCceEEEecCCcccccCCCCeE
Confidence               355        789999877651     2222211       11111  3455555544332211 0   0012467


Q ss_pred             EEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          387 YRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       387 ~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      +..++.+  ++. ..+..     ......+..+.|+||+++|+.. +  + ..|.+++++
T Consensus       333 ~iwd~~~--~~~~~~l~~-----~~~~~~~~~~~~s~~g~~l~s~-s--d-~~i~iw~~~  381 (383)
T 3ei3_B          333 DIYDANS--GGLVHQLRD-----PNAAGIISLNKFSPTGDVLASG-M--G-FNILIWNRE  381 (383)
T ss_dssp             EEEETTT--CCEEEEECB-----TTBCSCCCEEEECTTSSEEEEE-E--T-TEEEEEECC
T ss_pred             EEEecCC--CceeeeecC-----CCCCceEEEEEEecCccEEEEe-c--C-CcEEEEecC
Confidence            7777765  332 22221     0123345556999999988666 3  2 457777764

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=98.91  E-value=4e-07  Score=94.68  Aligned_cols=219  Identities=12%  Similarity=0.116  Sum_probs=121.3

Q ss_pred             cccccCCc-eEEEEeecCCCCCCCCCCcCCcEEEEEEc-CCcCCccCCcceeccc--cceEEEEEEeeeccCCccEEEEe
Q psy463          114 LRFSSDGK-KMLLILSHNQESDGSTPVDSWDHLTFIDL-DDQAGIKDKVPVPLTR--GRFTVTEILAWDERENNPLLILS  189 (790)
Q Consensus       114 ~~~spdg~-~i~~~~~~~~~~~~~~~~g~~~~l~~~~~-~~~~~~~~~~~~~lt~--~~~~~~~~~~~~~~~~~~~~~~~  189 (790)
                      ..|+|||+ .|+..+ .+            +.|.++++ .++.      ...+..  ....+.. +.|.+ ++  .++..
T Consensus        62 ~~~~~~~~~~l~~~~-~d------------g~i~~wd~~~~~~------~~~~~~~~~~~~v~~-l~~~~-~~--~l~s~  118 (342)
T 1yfq_A           62 CNFIDNTDLQIYVGT-VQ------------GEILKVDLIGSPS------FQALTNNEANLGICR-ICKYG-DD--KLIAA  118 (342)
T ss_dssp             EEEEESSSEEEEEEE-TT------------SCEEEECSSSSSS------EEECBSCCCCSCEEE-EEEET-TT--EEEEE
T ss_pred             EEECCCCCcEEEEEc-CC------------CeEEEEEeccCCc------eEeccccCCCCceEE-EEeCC-CC--EEEEE
Confidence            47899998 766544 22            27888898 7663      233443  3333433 35666 33  33332


Q ss_pred             cccCCCCCCCccccceeEEEecCC---------cccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcE
Q psy463          190 HNQESDGSTPVDSWDHLTFIDLDD---------QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVV  260 (790)
Q Consensus       190 ~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~  260 (790)
                      .           ....|.++++.+         ++.      ....                 .....+..+.|+|++ +
T Consensus       119 ~-----------~d~~i~iwd~~~~~~~~~~~~~~~------~~~~-----------------~~~~~v~~~~~~~~~-l  163 (342)
T 1yfq_A          119 S-----------WDGLIEVIDPRNYGDGVIAVKNLN------SNNT-----------------KVKNKIFTMDTNSSR-L  163 (342)
T ss_dssp             E-----------TTSEEEEECHHHHTTBCEEEEESC------SSSS-----------------SSCCCEEEEEECSSE-E
T ss_pred             c-----------CCCeEEEEcccccccccccccCCe------eeEE-----------------eeCCceEEEEecCCc-E
Confidence            2           115788888765         431      1111                 234557789999998 3


Q ss_pred             EEEEeccCcceEEEEEECCC-CceeEEEEEeCCCcccccCCceeEcc-CCCEEEEEEccccccCCCCCcCcccEEEEEEc
Q psy463          261 AAWVNRVQNRARITRCSINE-GTCDVVFSRDLDRGWFEPFDHLRFSS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDL  338 (790)
Q Consensus       261 ~~~~~r~~~~~~i~~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~sp-Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~  338 (790)
                      +.....+    .|.++++.+ +............   .......|+| ||+.|+ +.+    .+|        .+.++++
T Consensus       164 ~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~---~~i~~i~~~~~~~~~l~-~~~----~dg--------~i~i~~~  223 (342)
T 1yfq_A          164 IVGMNNS----QVQWFRLPLCEDDNGTIEESGLK---YQIRDVALLPKEQEGYA-CSS----IDG--------RVAVEFF  223 (342)
T ss_dssp             EEEESTT----EEEEEESSCCTTCCCEEEECSCS---SCEEEEEECSGGGCEEE-EEE----TTS--------EEEEEEC
T ss_pred             EEEeCCC----eEEEEECCccccccceeeecCCC---CceeEEEECCCCCCEEE-EEe----cCC--------cEEEEEE
Confidence            3333222    388999987 5542222211111   1134789999 999877 554    456        5666666


Q ss_pred             CCC------CcccCCCcccccCCC---------eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          339 DDQ------AGIKDKVPVPLTRGR---------FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       339 ~~~------~~~~~~~~~~lt~~~---------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                      +.+      +     ....+....         ..+.. ++|+|+++.|+..+.+     ..|+..++..  ++.  +..
T Consensus       224 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~d-----g~i~vwd~~~--~~~--~~~  288 (342)
T 1yfq_A          224 DDQGDDYNSS-----KRFAFRCHRLNLKDTNLAYPVNS-IEFSPRHKFLYTAGSD-----GIISCWNLQT--RKK--IKN  288 (342)
T ss_dssp             CTTCCSTTCT-----TCEEEECCCCCTTCCSSCCCEEE-EEECTTTCCEEEEETT-----SCEEEEETTT--TEE--EEE
T ss_pred             cCCCcccccc-----cceeeecccccccccccceeEEE-EEEcCCCCEEEEecCC-----ceEEEEcCcc--HhH--hhh
Confidence            544      2     122232221         13444 7899999988766655     3466667655  332  221


Q ss_pred             cccccCCC-cccEEEEEEecCCcEEEEEe
Q psy463          404 DLLTSANQ-KCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       404 ~~~~~~~~-~~~~~~~~~s~dg~~~~~~~  431 (790)
                       +   ... ...+..+.  ||+++++...
T Consensus       289 -~---~~~h~~~v~~~~--~~~~~l~s~s  311 (342)
T 1yfq_A          289 -F---AKFNEDSVVKIA--CSDNILCLAT  311 (342)
T ss_dssp             -C---CCCSSSEEEEEE--ECSSEEEEEE
T ss_pred             -h---hcccCCCceEec--CCCCeEEEEe
Confidence             1   112 34555555  9999887654

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=98.90  E-value=1.3e-07  Score=100.99  Aligned_cols=250  Identities=14%  Similarity=0.144  Sum_probs=136.2

Q ss_pred             ccccc-CCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccC--CcceeccccceEEEEEEeeeccCCccEEEEec
Q psy463          114 LRFSS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD--KVPVPLTRGRFTVTEILAWDERENNPLLILSH  190 (790)
Q Consensus       114 ~~~sp-dg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~--~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~  190 (790)
                      ..|+| +++.|+..+ .++            .|.++++.++.....  .....+......+. -+.|++++.. +++...
T Consensus        87 ~~~~p~~~~~l~s~s-~dg------------~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~-~l~s~~  151 (402)
T 2aq5_A           87 IAWCPHNDNVIASGS-EDC------------TVMVWEIPDGGLVLPLREPVITLEGHTKRVG-IVAWHPTAQN-VLLSAG  151 (402)
T ss_dssp             EEECTTCTTEEEEEE-TTS------------EEEEEECCTTCCSSCBCSCSEEEECCSSCEE-EEEECSSBTT-EEEEEE
T ss_pred             EEeCCCCCCEEEEEe-CCC------------eEEEEEccCCCCccccCCceEEecCCCCeEE-EEEECcCCCC-EEEEEc
Confidence            36789 666555433 222            678888766521000  01222333332333 3467776543 333322


Q ss_pred             ccCCCCCCCccccceeEEEecCCcccccCcCCccc--cccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccC
Q psy463          191 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL--TRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQ  268 (790)
Q Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l--t~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~  268 (790)
                                 ....|.+.|+.+++.     ...+  .                 .....+..+.|+|||++++....+.
T Consensus       152 -----------~dg~i~iwd~~~~~~-----~~~~~~~-----------------~~~~~v~~~~~~~~~~~l~~~~~d~  198 (402)
T 2aq5_A          152 -----------CDNVILVWDVGTGAA-----VLTLGPD-----------------VHPDTIYSVDWSRDGALICTSCRDK  198 (402)
T ss_dssp             -----------TTSCEEEEETTTTEE-----EEEECTT-----------------TCCSCEEEEEECTTSSCEEEEETTS
T ss_pred             -----------CCCEEEEEECCCCCc-----cEEEecC-----------------CCCCceEEEEECCCCCEEEEEecCC
Confidence                       115788888887653     1222  2                 3456688999999999555554332


Q ss_pred             cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCC
Q psy463          269 NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV  348 (790)
Q Consensus       269 ~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~  348 (790)
                         .|.++|+.+++......... .+.  ......|+|||+.|+ +..   ....      ...|.++|+.+++     .
T Consensus       199 ---~i~iwd~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~l~-~g~---~~~~------d~~i~iwd~~~~~-----~  257 (402)
T 2aq5_A          199 ---RVRVIEPRKGTVVAEKDRPH-EGT--RPVHAVFVSEGKILT-TGF---SRMS------ERQVALWDTKHLE-----E  257 (402)
T ss_dssp             ---EEEEEETTTTEEEEEEECSS-CSS--SCCEEEECSTTEEEE-EEE---CTTC------CEEEEEEETTBCS-----S
T ss_pred             ---cEEEEeCCCCceeeeeccCC-CCC--cceEEEEcCCCcEEE-Eec---cCCC------CceEEEEcCcccc-----C
Confidence               39999999887654442111 111  134689999998766 442   1112      3379999987754     1


Q ss_pred             ccc-cc-CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC--cceeeecccccCCCcccEEEEEEecCC
Q psy463          349 PVP-LT-RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT--PECITCDLLTSANQKCSYSGATFSTNV  424 (790)
Q Consensus       349 ~~~-lt-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~~~s~dg  424 (790)
                      +.. .. .....+.. +.|+||++.|++.+...    ..|...++..  ++  ...+...     .....+..+.|+|++
T Consensus       258 ~~~~~~~~~~~~v~~-~~~s~~~~~l~~~g~~d----g~i~i~d~~~--~~~~~~~l~~~-----~~~~~v~~~~~sp~~  325 (402)
T 2aq5_A          258 PLSLQELDTSSGVLL-PFFDPDTNIVYLCGKGD----SSIRYFEITS--EAPFLHYLSMF-----SSKESQRGMGYMPKR  325 (402)
T ss_dssp             CSEEEECCCCSSCEE-EEEETTTTEEEEEETTC----SCEEEEEECS--STTCEEEEEEE-----CCSSCCSEEEECCGG
T ss_pred             CceEEeccCCCceeE-EEEcCCCCEEEEEEcCC----CeEEEEEecC--CCcceEeeccc-----ccCCcccceEEeccc
Confidence            111 11 12222333 78999999888777532    2344445544  33  2233321     023456778999999


Q ss_pred             cEEEEEeecCCCCeEEEEecCCCeE
Q psy463          425 SYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       425 ~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      .+++.   +  -..+.++++.+++.
T Consensus       326 ~~~~s---~--~~~~~~~~l~~~~~  345 (402)
T 2aq5_A          326 GLEVN---K--CEIARFYKLHERKC  345 (402)
T ss_dssp             GSCGG---G--TEEEEEEEEETTEE
T ss_pred             cccee---c--ceeEEEEEcCCCcE
Confidence            87642   1  12455555544433

>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17

Probab=98.90  E-value=6.2e-09  Score=113.98  Aligned_cols=132  Identities=17%  Similarity=0.154  Sum_probs=86.3

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHH--hcCCeEEEEEcCCCCC-CChhhhHhhhhccC
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLA--DNKDIVVAYIDGRNSA-LKGNTLKYAGYRRL  559 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~--~~~G~~v~~~d~rG~~-~~g~~~~~~~~~~~  559 (790)
                      +...+|.|.+..  ..+++|+||++|||+........+..   ..++  ...|++|+.+|||... ++........ ...
T Consensus        86 l~l~v~~P~~~~--~~~~~Pviv~iHGGg~~~g~~~~~~~---~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~-~~~  159 (522)
T 1ukc_A           86 LFINVFKPSTAT--SQSKLPVWLFIQGGGYAENSNANYNG---TQVIQASDDVIVFVTFNYRVGALGFLASEKVRQ-NGD  159 (522)
T ss_dssp             CEEEEEEETTCC--TTCCEEEEEEECCSTTTSCCSCSCCC---HHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHH-SSC
T ss_pred             CEEEEEECCCCC--CCCCCCEEEEECCCccccCCccccCc---HHHHHhcCCcEEEEEecccccccccccchhccc-cCC
Confidence            445677787543  45678999999999876432333322   1222  3469999999999422 1111100000 011


Q ss_pred             CccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCC---CCceEEEEEeCCCC
Q psy463          560 GTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDP---SNVFKCGISVAPVT  620 (790)
Q Consensus       560 ~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p---~~~~~~~v~~~~~~  620 (790)
                      +...+.|+.++++|+.++..  ..|++||.|+|+|.||.++..++....   ...|+++|+.+|..
T Consensus       160 ~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~  225 (522)
T 1ukc_A          160 LNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW  225 (522)
T ss_dssp             TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence            23458899999999987522  268999999999999988776665421   35899999998864

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.89  E-value=1.1e-06  Score=90.63  Aligned_cols=236  Identities=13%  Similarity=0.030  Sum_probs=131.9

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|.|+||++.++++....+            .|++++.++++      ...++.. ..+.. ..++++++  +++... 
T Consensus        52 egp~~~~~~~~l~~~d~~~~------------~i~~~d~~~~~------~~~~~~~-~~v~~-i~~~~dg~--l~v~~~-  108 (326)
T 2ghs_A           52 EGPTFDPASGTAWWFNILER------------ELHELHLASGR------KTVHALP-FMGSA-LAKISDSK--QLIASD-  108 (326)
T ss_dssp             EEEEEETTTTEEEEEEGGGT------------EEEEEETTTTE------EEEEECS-SCEEE-EEEEETTE--EEEEET-
T ss_pred             cCCeEeCCCCEEEEEECCCC------------EEEEEECCCCc------EEEEECC-CcceE-EEEeCCCe--EEEEEC-
Confidence            35899999998888764432            89999988763      1222211 12322 34666553  433321 


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEecc---C
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRV---Q  268 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~---~  268 (790)
                                  ..|++++.++++.+.      +...           + ..........+.++|||++.+.....   .
T Consensus       109 ------------~gl~~~d~~~g~~~~------~~~~-----------~-~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~  158 (326)
T 2ghs_A          109 ------------DGLFLRDTATGVLTL------HAEL-----------E-SDLPGNRSNDGRMHPSGALWIGTMGRKAET  158 (326)
T ss_dssp             ------------TEEEEEETTTCCEEE------EECS-----------S-TTCTTEEEEEEEECTTSCEEEEEEETTCCT
T ss_pred             ------------CCEEEEECCCCcEEE------EeeC-----------C-CCCCCCCCCCEEECCCCCEEEEeCCCcCCC
Confidence                        469999988876322      2100           0 00112356789999999943332211   1


Q ss_pred             cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcC--CC-Cccc
Q psy463          269 NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLD--DQ-AGIK  345 (790)
Q Consensus       269 ~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~--~~-~~~~  345 (790)
                      ....||+++  +++.+.+.....      ....+.|||||+.|++..+    ..        ..|++++++  ++ +...
T Consensus       159 ~~~~l~~~~--~g~~~~~~~~~~------~~~~i~~s~dg~~lyv~~~----~~--------~~I~~~d~~~~~Gl~~~~  218 (326)
T 2ghs_A          159 GAGSIYHVA--KGKVTKLFADIS------IPNSICFSPDGTTGYFVDT----KV--------NRLMRVPLDARTGLPTGK  218 (326)
T ss_dssp             TCEEEEEEE--TTEEEEEEEEES------SEEEEEECTTSCEEEEEET----TT--------CEEEEEEBCTTTCCBSSC
T ss_pred             CceEEEEEe--CCcEEEeeCCCc------ccCCeEEcCCCCEEEEEEC----CC--------CEEEEEEcccccCCcccC
Confidence            234699998  576665543321      1236899999998885443    22        379999975  45 3000


Q ss_pred             CCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEe-cCC
Q psy463          346 DKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFS-TNV  424 (790)
Q Consensus       346 ~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s-~dg  424 (790)
                      ......+........+ +.++++|+ |++....+    ..|++++.++  ...+.+..       .......+.|+ +|+
T Consensus       219 ~~~~~~~~~~~~~p~g-i~~d~~G~-lwva~~~~----~~v~~~d~~g--~~~~~i~~-------~~~~~~~~af~g~d~  283 (326)
T 2ghs_A          219 AEVFIDSTGIKGGMDG-SVCDAEGH-IWNARWGE----GAVDRYDTDG--NHIARYEV-------PGKQTTCPAFIGPDA  283 (326)
T ss_dssp             CEEEEECTTSSSEEEE-EEECTTSC-EEEEEETT----TEEEEECTTC--CEEEEEEC-------SCSBEEEEEEESTTS
T ss_pred             ceEEEECCCCCCCCCe-eEECCCCC-EEEEEeCC----CEEEEECCCC--CEEEEEEC-------CCCCcEEEEEecCCC
Confidence            0000111111222233 77889986 55554332    3688888744  22233332       22356778898 898


Q ss_pred             cEEEEEeecCC
Q psy463          425 SYYVLSCIGPG  435 (790)
Q Consensus       425 ~~~~~~~~~~~  435 (790)
                      +.++++....+
T Consensus       284 ~~L~vt~~~~~  294 (326)
T 2ghs_A          284 SRLLVTSAREH  294 (326)
T ss_dssp             CEEEEEEBCTT
T ss_pred             CEEEEEecCCC
Confidence            88877655443

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=98.88  E-value=6.6e-07  Score=95.25  Aligned_cols=183  Identities=14%  Similarity=0.143  Sum_probs=109.3

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|.+.|+++++.     ...+.                 .....+..+.|+|||+.++....+.   .|.++|+.++++
T Consensus       145 ~~i~iwd~~~~~~-----~~~~~-----------------~h~~~v~~~~~~p~~~~l~s~s~d~---~v~iwd~~~~~~  199 (393)
T 1erj_A          145 RLIRIWDIENRKI-----VMILQ-----------------GHEQDIYSLDYFPSGDKLVSGSGDR---TVRIWDLRTGQC  199 (393)
T ss_dssp             SCEEEEETTTTEE-----EEEEC-----------------CCSSCEEEEEECTTSSEEEEEETTS---EEEEEETTTTEE
T ss_pred             CeEEEEECCCCcE-----EEEEc-----------------cCCCCEEEEEEcCCCCEEEEecCCC---cEEEEECCCCee
Confidence            5778888887652     12222                 4456688999999999665554432   388889999887


Q ss_pred             eEEEEEeCCCcccccCCceeEcc-CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc-------cCC
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL-------TRG  355 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~sp-Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l-------t~~  355 (790)
                      ........      ......|+| ||+.|+ +.+    .+|        .|.++|+.+++.     ...+       +.+
T Consensus       200 ~~~~~~~~------~v~~~~~~~~~~~~l~-~~s----~d~--------~v~iwd~~~~~~-----~~~~~~~~~~~~~h  255 (393)
T 1erj_A          200 SLTLSIED------GVTTVAVSPGDGKYIA-AGS----LDR--------AVRVWDSETGFL-----VERLDSENESGTGH  255 (393)
T ss_dssp             EEEEECSS------CEEEEEECSTTCCEEE-EEE----TTS--------CEEEEETTTCCE-----EEEEC------CCC
T ss_pred             EEEEEcCC------CcEEEEEECCCCCEEE-EEc----CCC--------cEEEEECCCCcE-----EEeecccccCCCCC
Confidence            65444221      134688999 888776 555    455        578889877651     2222       222


Q ss_pred             CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC--------cceeeecccccCCCcccEEEEEEecCCcEE
Q psy463          356 RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT--------PECITCDLLTSANQKCSYSGATFSTNVSYY  427 (790)
Q Consensus       356 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~  427 (790)
                      ...+.. ++|+|||+.|+..+.++.   ..||  ++......        ..+...    ..+....+..+.++++++++
T Consensus       256 ~~~v~~-v~~~~~g~~l~s~s~d~~---v~~w--d~~~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l  325 (393)
T 1erj_A          256 KDSVYS-VVFTRDGQSVVSGSLDRS---VKLW--NLQNANNKSDSKTPNSGTCEVT----YIGHKDFVLSVATTQNDEYI  325 (393)
T ss_dssp             SSCEEE-EEECTTSSEEEEEETTSE---EEEE--EC---------------CEEEE----EECCSSCEEEEEECGGGCEE
T ss_pred             CCCEEE-EEECCCCCEEEEEeCCCE---EEEE--ECCCCCCcccccCCCCCcceEE----EecccCcEEEEEECCCCCEE
Confidence            333444 889999998876665532   4444  44321000        011110    11234567789999999987


Q ss_pred             EEEeecCCCCeEEEEecCCCe
Q psy463          428 VLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       428 ~~~~~~~~~~~i~~~~~~~~~  448 (790)
                      +....   -..++++|..+++
T Consensus       326 ~sgs~---D~~v~iwd~~~~~  343 (393)
T 1erj_A          326 LSGSK---DRGVLFWDKKSGN  343 (393)
T ss_dssp             EEEET---TSEEEEEETTTCC
T ss_pred             EEEeC---CCeEEEEECCCCe
Confidence            65432   2457888876543

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=98.88  E-value=2.3e-06  Score=89.48  Aligned_cols=273  Identities=7%  Similarity=0.048  Sum_probs=149.3

Q ss_pred             ccccccCCCcceeEeeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCC
Q psy463           60 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  139 (790)
Q Consensus        60 ~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~  139 (790)
                      .+..+.|++++..+.-...   .-.+.+++..++.+........  .|+   ....|+|||+.|+-.. .          
T Consensus        66 ~V~~~~~s~d~~~l~s~s~---Dg~v~vWd~~~~~~~~~~~~~~--~~v---~~~~~sp~g~~lasg~-~----------  126 (354)
T 2pbi_B           66 KVLCMDWCKDKRRIVSSSQ---DGKVIVWDSFTTNKEHAVTMPC--TWV---MACAYAPSGCAIACGG-L----------  126 (354)
T ss_dssp             CEEEEEECTTSSEEEEEET---TSEEEEEETTTCCEEEEEECSS--SCC---CEEEECTTSSEEEEES-T----------
T ss_pred             eEEEEEECCCCCEEEEEeC---CCeEEEEECCCCCcceEEecCC--CCE---EEEEECCCCCEEEEee-C----------
Confidence            3445667766654433322   2346677776665554433322  222   3458999999877432 1          


Q ss_pred             cCCcEEEEEEcCCcCCccC-CcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCccccc
Q psy463          140 DSWDHLTFIDLDDQAGIKD-KVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIK  218 (790)
Q Consensus       140 g~~~~l~~~~~~~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  218 (790)
                        -+.+.++++........ .....+...... .....|.+++.  .++...           ....|.+.|+++++.  
T Consensus       127 --d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~--~l~t~s-----------~D~~v~lwd~~~~~~--  188 (354)
T 2pbi_B          127 --DNKCSVYPLTFDKNENMAAKKKSVAMHTNY-LSACSFTNSDM--QILTAS-----------GDGTCALWDVESGQL--  188 (354)
T ss_dssp             --TSEEEEEECCCCTTCCSGGGCEEEEECSSC-EEEEEECSSSS--EEEEEE-----------TTSEEEEEETTTCCE--
T ss_pred             --CCCEEEEEEeccccccccccceeeeccCCc-EEEEEEeCCCC--EEEEEe-----------CCCcEEEEeCCCCeE--
Confidence              22566666543310000 011112211111 22345555544  222221           115778888887652  


Q ss_pred             CcCCccccccccceeehhhcccCCCCCCCEEEEEEEcc--CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCccc
Q psy463          219 DKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWAN--ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWF  296 (790)
Q Consensus       219 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp--Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~  296 (790)
                         ...+.                 .....+..+.|+|  +|+.++....+.   .|.++|+.++++...+...  ..  
T Consensus       189 ---~~~~~-----------------~h~~~v~~~~~~~~~~g~~l~sgs~Dg---~v~~wd~~~~~~~~~~~~h--~~--  241 (354)
T 2pbi_B          189 ---LQSFH-----------------GHGADVLCLDLAPSETGNTFVSGGCDK---KAMVWDMRSGQCVQAFETH--ES--  241 (354)
T ss_dssp             ---EEEEE-----------------CCSSCEEEEEECCCSSCCEEEEEETTS---CEEEEETTTCCEEEEECCC--SS--
T ss_pred             ---EEEEc-----------------CCCCCeEEEEEEeCCCCCEEEEEeCCC---eEEEEECCCCcEEEEecCC--CC--
Confidence               12222                 3344566777877  566555554432   2899999988775544321  11  


Q ss_pred             ccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCC--eEEeEEEeeecCCCEEEE
Q psy463          297 EPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR--FTVTEILAWDEKENNVYF  374 (790)
Q Consensus       297 ~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~--~~~~~~~~~s~dg~~l~~  374 (790)
                       ......|+|||+.|+ +.+    .++        .|.++|+..++     ....+....  ..+.. +.|+|+|+.|+.
T Consensus       242 -~v~~v~~~p~~~~l~-s~s----~D~--------~v~lwd~~~~~-----~~~~~~~~~~~~~~~~-~~~s~~g~~l~~  301 (354)
T 2pbi_B          242 -DVNSVRYYPSGDAFA-SGS----DDA--------TCRLYDLRADR-----EVAIYSKESIIFGASS-VDFSLSGRLLFA  301 (354)
T ss_dssp             -CEEEEEECTTSSEEE-EEE----TTS--------CEEEEETTTTE-----EEEEECCTTCCSCEEE-EEECTTSSEEEE
T ss_pred             -CeEEEEEeCCCCEEE-EEe----CCC--------eEEEEECCCCc-----EEEEEcCCCcccceeE-EEEeCCCCEEEE
Confidence             134789999999877 565    455        58888987664     122222221  22333 789999997777


Q ss_pred             EEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          375 LSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       375 ~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      .+.++     .|...++..  ++. ..+.       +....+..+.|||||++++..
T Consensus       302 g~~d~-----~i~vwd~~~--~~~~~~l~-------~h~~~v~~l~~spdg~~l~sg  344 (354)
T 2pbi_B          302 GYNDY-----TINVWDVLK--GSRVSILF-------GHENRVSTLRVSPDGTAFCSG  344 (354)
T ss_dssp             EETTS-----CEEEEETTT--CSEEEEEC-------CCSSCEEEEEECTTSSCEEEE
T ss_pred             EECCC-----cEEEEECCC--CceEEEEE-------CCCCcEEEEEECCCCCEEEEE
Confidence            66653     455556544  332 1221       245678889999999987654

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=98.88  E-value=4.6e-07  Score=98.20  Aligned_cols=76  Identities=7%  Similarity=0.010  Sum_probs=49.2

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCC-CceeEEEEEeCCCcccc------------cCCceeEccCCCEEEEE
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINE-GTCDVVFSRDLDRGWFE------------PFDHLRFSSDGKKMLLI  314 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~-g~~~~l~~~~~~~~~~~------------~~~~~~~spDg~~i~~~  314 (790)
                      .+..+.|+|||++++....    ..|.++|+.+ +++...+...  .....            ......|||||+.|+ +
T Consensus       287 ~v~~~~~s~~g~~l~~~~~----~~v~iwd~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~-s  359 (447)
T 3dw8_B          287 SISDVKFSHSGRYMMTRDY----LSVKVWDLNMENRPVETYQVH--EYLRSKLCSLYENDCIFDKFECCWNGSDSVVM-T  359 (447)
T ss_dssp             CEEEEEECTTSSEEEEEES----SEEEEEETTCCSSCSCCEESC--GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEE-E
T ss_pred             eEEEEEECCCCCEEEEeeC----CeEEEEeCCCCccccceeecc--ccccccccccccccccccceEEEECCCCCEEE-E
Confidence            6889999999996555443    2488899886 6544333211  10000            011289999999886 5


Q ss_pred             EccccccCCCCCcCcccEEEEEEcCCCC
Q psy463          315 LSHNQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       315 ~~~~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                      .+    .+|        .|.++|+.+++
T Consensus       360 ~s----~dg--------~v~iwd~~~~~  375 (447)
T 3dw8_B          360 GS----YNN--------FFRMFDRNTKR  375 (447)
T ss_dssp             EC----STT--------EEEEEETTTCC
T ss_pred             ec----cCC--------EEEEEEcCCCc
Confidence            65    456        68899988765

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=98.87  E-value=1.1e-07  Score=102.15  Aligned_cols=237  Identities=12%  Similarity=0.092  Sum_probs=142.4

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ..+|+|||+.|+..+. +            +.++++++.++.     ....+...  .+.....+.++++  ++....  
T Consensus        61 ~~~~s~~g~~l~~~~~-d------------~~v~i~d~~~~~-----~~~~~~~~--~~~~~~~~~~~~~--~l~~~~--  116 (420)
T 3vl1_A           61 GNTFEKVGSHLYKARL-D------------GHDFLFNTIIRD-----GSKMLKRA--DYTAVDTAKLQMR--RFILGT--  116 (420)
T ss_dssp             TCEEEEEETTEEEEEE-T------------TEEEEEECCSEE-----TTTTSCSC--CEEEEEEECSSSC--EEEEEE--
T ss_pred             ceeeeecCCeEEEEEc-C------------CcEEEEEecccc-----eeeEEecC--CceEEEEEecCCC--EEEEEE--
Confidence            5689999999886553 1            278999987764     11222222  3344445555554  332222  


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                               ....|.++++.+++...     .+.                 .....+..+.|+|||++++....+.   .
T Consensus       117 ---------~dg~i~iwd~~~~~~~~-----~~~-----------------~h~~~v~~~~~~~~~~~l~s~s~d~---~  162 (420)
T 3vl1_A          117 ---------TEGDIKVLDSNFNLQRE-----IDQ-----------------AHVSEITKLKFFPSGEALISSSQDM---Q  162 (420)
T ss_dssp             ---------TTSCEEEECTTSCEEEE-----ETT-----------------SSSSCEEEEEECTTSSEEEEEETTS---E
T ss_pred             ---------CCCCEEEEeCCCcceee-----ecc-----------------cccCccEEEEECCCCCEEEEEeCCC---e
Confidence                     11578888887765311     112                 4456788999999999666554432   3


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      |.++|+.++++...+...  ..   ......|+|||+.|+ +.+    .+|        .|.++|+.+++.     ...+
T Consensus       163 i~iwd~~~~~~~~~~~~h--~~---~v~~~~~~~~~~~l~-s~~----~d~--------~v~iwd~~~~~~-----~~~~  219 (420)
T 3vl1_A          163 LKIWSVKDGSNPRTLIGH--RA---TVTDIAIIDRGRNVL-SAS----LDG--------TIRLWECGTGTT-----IHTF  219 (420)
T ss_dssp             EEEEETTTCCCCEEEECC--SS---CEEEEEEETTTTEEE-EEE----TTS--------CEEEEETTTTEE-----EEEE
T ss_pred             EEEEeCCCCcCceEEcCC--CC---cEEEEEEcCCCCEEE-EEc----CCC--------cEEEeECCCCce-----eEEe
Confidence            999999988765544321  11   144789999999887 555    455        588889877651     2222


Q ss_pred             cCC---C---------------------eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecccc
Q psy463          353 TRG---R---------------------FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDLLT  407 (790)
Q Consensus       353 t~~---~---------------------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~  407 (790)
                      ...   .                     ..+. .+.|+|+++.|+..+.++     .|...++..  ++ ...+..    
T Consensus       220 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg-----~i~i~d~~~--~~~~~~~~~----  287 (420)
T 3vl1_A          220 NRKENPHDGVNSIALFVGTDRQLHEISTSKKN-NLEFGTYGKYVIAGHVSG-----VITVHNVFS--KEQTIQLPS----  287 (420)
T ss_dssp             CBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC-TTCSSCTTEEEEEEETTS-----CEEEEETTT--CCEEEEECC----
T ss_pred             ecCCCCCCCccEEEEecCCcceeeecccCccc-ceEEcCCCCEEEEEcCCC-----eEEEEECCC--CceeEEccc----
Confidence            211   0                     1111 156789998887766653     455666655  22 222211    


Q ss_pred             cCCCcccEEEEEEecCCc-EEEEEeecCCCCeEEEEecCCC
Q psy463          408 SANQKCSYSGATFSTNVS-YYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~dg~-~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                        .....+..+.|+|+++ +++... .  -..|.++|+.++
T Consensus       288 --~~~~~v~~~~~~~~~~~~l~~g~-~--dg~i~vwd~~~~  323 (420)
T 3vl1_A          288 --KFTCSCNSLTVDGNNANYIYAGY-E--NGMLAQWDLRSP  323 (420)
T ss_dssp             --TTSSCEEEEEECSSCTTEEEEEE-T--TSEEEEEETTCT
T ss_pred             --ccCCCceeEEEeCCCCCEEEEEe-C--CCeEEEEEcCCC
Confidence              1345788899999998 655433 2  246888888763

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=98.87  E-value=1.1e-07  Score=99.12  Aligned_cols=68  Identities=10%  Similarity=0.151  Sum_probs=45.2

Q ss_pred             Eeeec-CCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEE
Q psy463          363 LAWDE-KENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIML  441 (790)
Q Consensus       363 ~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~  441 (790)
                      +.|+| ||+.+|+.  .     ..|+++++.+  ++......       .......+.|||||++++..  +. ...|.+
T Consensus       260 ~~~sp~dg~~l~~~--~-----~~v~~~d~~~--~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~--~~-~~~v~v  320 (349)
T 1jmx_B          260 GLRSPKDPNQIYGV--L-----NRLAKYDLKQ--RKLIKAAN-------LDHTYYCVAFDKKGDKLYLG--GT-FNDLAV  320 (349)
T ss_dssp             EEECSSCTTEEEEE--E-----SEEEEEETTT--TEEEEEEE-------CSSCCCEEEECSSSSCEEEE--SB-SSEEEE
T ss_pred             eEecCCCCCEEEEE--c-----CeEEEEECcc--CeEEEEEc-------CCCCccceEECCCCCEEEEe--cC-CCeEEE
Confidence            46779 99987776  2     4788899876  44322221       11234568999999988764  22 367999


Q ss_pred             EecCCCeE
Q psy463          442 FDKTGQRL  449 (790)
Q Consensus       442 ~~~~~~~~  449 (790)
                      +|+++++.
T Consensus       321 ~d~~~~~~  328 (349)
T 1jmx_B          321 FNPDTLEK  328 (349)
T ss_dssp             EETTTTEE
T ss_pred             Eeccccce
Confidence            99877543

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=98.86  E-value=1.9e-06  Score=91.88  Aligned_cols=185  Identities=10%  Similarity=0.106  Sum_probs=103.0

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCc
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGT  282 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~  282 (790)
                      ..|.++++.+++.     ...+.                 .....+..+.|+|||+ +++....+.   .|.++|+.++.
T Consensus       166 ~~v~~~d~~~~~~-----~~~~~-----------------~~~~~v~~~~~~~~~~~ll~~~~~dg---~i~i~d~~~~~  220 (408)
T 4a11_B          166 PKVQLCDLKSGSC-----SHILQ-----------------GHRQEILAVSWSPRYDYILATASADS---RVKLWDVRRAS  220 (408)
T ss_dssp             SSEEEEESSSSCC-----CEEEC-----------------CCCSCEEEEEECSSCTTEEEEEETTS---CEEEEETTCSS
T ss_pred             CeEEEEeCCCcce-----eeeec-----------------CCCCcEEEEEECCCCCcEEEEEcCCC---cEEEEECCCCC
Confidence            5788889887653     22232                 4456688999999999 555554432   28888887654


Q ss_pred             e-eEEEEEeCC----------CcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          283 C-DVVFSRDLD----------RGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       283 ~-~~l~~~~~~----------~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      . .........          ...........|+|||+.|+ +.+    .+|        .|.++|+.+++.     ...
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~----~dg--------~i~vwd~~~~~~-----~~~  282 (408)
T 4a11_B          221 GCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLL-TVG----TDN--------RMRLWNSSNGEN-----TLV  282 (408)
T ss_dssp             CCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEE-EEE----TTS--------CEEEEETTTCCB-----CCC
T ss_pred             cccccccccccccceeeccccccccCceeEEEEcCCCCEEE-Eec----CCC--------eEEEEECCCCcc-----cee
Confidence            2 111100000          00001234689999999887 454    455        588999887751     111


Q ss_pred             ccCC-----CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcE
Q psy463          352 LTRG-----RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSY  426 (790)
Q Consensus       352 lt~~-----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~  426 (790)
                      +...     .......... ..+..+++.+..     ..|...++..  ++......      +....+..+.|+|++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~i~v~d~~~--~~~~~~~~------~~~~~v~~~~~s~~~~~  348 (408)
T 4a11_B          283 NYGKVCNNSKKGLKFTVSC-GCSSEFVFVPYG-----STIAVYTVYS--GEQITMLK------GHYKTVDCCVFQSNFQE  348 (408)
T ss_dssp             CCCCCCCCCSSCCCCEECC-SSSSCEEEEEET-----TEEEEEETTT--CCEEEEEC------CCSSCEEEEEEETTTTE
T ss_pred             ccccccccccccceeEEec-CCCceEEEEecC-----CEEEEEECcC--Ccceeeec------cCCCeEEEEEEcCCCCE
Confidence            1110     0011111222 233445555554     3677777765  33222111      14567888999999998


Q ss_pred             EEEEeecCCCCeEEEEecCCCe
Q psy463          427 YVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       427 ~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                      ++.....   ..|.++++...+
T Consensus       349 l~s~~~d---g~i~iw~~~~~~  367 (408)
T 4a11_B          349 LYSGSRD---CNILAWVPSLYE  367 (408)
T ss_dssp             EEEEETT---SCEEEEEECC--
T ss_pred             EEEECCC---CeEEEEeCCCCC
Confidence            8654332   357888876643

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=98.84  E-value=3e-06  Score=93.88  Aligned_cols=285  Identities=13%  Similarity=0.100  Sum_probs=154.3

Q ss_pred             EEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEc--CCcCCccCCcc
Q psy463           84 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL--DDQAGIKDKVP  161 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~--~~~~~~~~~~~  161 (790)
                      .+.+++..++++...+.....      ....+|||||+++|..+. ++            .|.++|+  .+++     ..
T Consensus       160 ~V~v~D~~t~~~~~~i~~g~~------~~~v~~spdg~~l~v~~~-d~------------~V~v~D~~~~t~~-----~~  215 (543)
T 1nir_A          160 QIALVDGDSKKIVKVIDTGYA------VHISRMSASGRYLLVIGR-DA------------RIDMIDLWAKEPT-----KV  215 (543)
T ss_dssp             EEEEEETTTCCEEEEEECSTT------EEEEEECTTSCEEEEEET-TS------------EEEEEETTSSSCE-----EE
T ss_pred             eEEEEECCCceEEEEEecCcc------cceEEECCCCCEEEEECC-CC------------eEEEEECcCCCCc-----EE
Confidence            456678888877654432110      113479999998876553 22            7999999  5552     23


Q ss_pred             eeccccceEEEEEEeeec----cCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhh
Q psy463          162 VPLTRGRFTVTEILAWDE----RENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILA  237 (790)
Q Consensus       162 ~~lt~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~  237 (790)
                      ..+..+.. . .-.++++    +++  .+|+....          ...|.++|.++++..+.     +........ ...
T Consensus       216 ~~i~~g~~-p-~~va~sp~~~~dg~--~l~v~~~~----------~~~v~v~D~~t~~~~~~-----i~~~g~~~~-~~~  275 (543)
T 1nir_A          216 AEIKIGIE-A-RSVESSKFKGYEDR--YTIAGAYW----------PPQFAIMDGETLEPKQI-----VSTRGMTVD-TQT  275 (543)
T ss_dssp             EEEECCSE-E-EEEEECCSTTCTTT--EEEEEEEE----------SSEEEEEETTTCCEEEE-----EECCEECSS-SCC
T ss_pred             EEEecCCC-c-ceEEeCCCcCCCCC--EEEEEEcc----------CCeEEEEecccccccee-----ecccCcccC-ccc
Confidence            44444432 2 2345677    665  45554321          15788888887663221     110000000 000


Q ss_pred             cccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcc
Q psy463          238 WDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSH  317 (790)
Q Consensus       238 ~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~  317 (790)
                      +     ........+.+|||++.++.+.+..  ..|.++|..+++...+..... ..+   .....|+|||++++ .++ 
T Consensus       276 ~-----~~~~~v~~i~~s~~~~~~~vs~~~~--g~i~vvd~~~~~~l~~~~i~~-~~~---~~~~~~spdg~~l~-va~-  342 (543)
T 1nir_A          276 Y-----HPEPRVAAIIASHEHPEFIVNVKET--GKVLLVNYKDIDNLTVTSIGA-APF---LHDGGWDSSHRYFM-TAA-  342 (543)
T ss_dssp             E-----ESCCCEEEEEECSSSSEEEEEETTT--TEEEEEECTTSSSCEEEEEEC-CSS---CCCEEECTTSCEEE-EEE-
T ss_pred             c-----ccCCceEEEEECCCCCEEEEEECCC--CeEEEEEecCCCcceeEEecc-CcC---ccCceECCCCCEEE-EEe-
Confidence            0     0122467889999999554544433  349999998866544333322 222   34789999999886 343 


Q ss_pred             ccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE--eEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCC
Q psy463          318 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV--TEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPT  395 (790)
Q Consensus       318 ~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~--~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~  395 (790)
                        ..++        .|.++|+.+++     ....+..+....  .+...++|+++.+++++..+.   ..|-+++++...
T Consensus       343 --~~~~--------~v~v~D~~tg~-----l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d---~~V~v~d~~~~~  404 (543)
T 1nir_A          343 --NNSN--------KVAVIDSKDRR-----LSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD---GSISLIGTDPKN  404 (543)
T ss_dssp             --GGGT--------EEEEEETTTTE-----EEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS---SEEEEEECCTTT
T ss_pred             --cCCC--------eEEEEECCCCe-----EEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC---ceEEEEEeCCCC
Confidence              1233        68899998886     122233221110  111114788777777665433   356666665411


Q ss_pred             C---CcceeeecccccCCCcccEEEEEEecCCcEEEEEee-cCC---CCeEEEEecCCC
Q psy463          396 A---TPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI-GPG---IPEIMLFDKTGQ  447 (790)
Q Consensus       396 ~---~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~-~~~---~~~i~~~~~~~~  447 (790)
                      .   ..+++.. +   .+.......+.++|||++++.... +++   -..|.++|.++.
T Consensus       405 ~~~~~~~~v~~-l---~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~  459 (543)
T 1nir_A          405 HPQYAWKKVAE-L---QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL  459 (543)
T ss_dssp             CTTTBTSEEEE-E---ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred             CchhcCeEEEE-E---EcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence            1   1222221 1   112233445789999999866431 222   347999999764

>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A

Probab=98.84  E-value=5e-09  Score=112.05  Aligned_cols=113  Identities=13%  Similarity=0.052  Sum_probs=77.4

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|+||++||.+++.  ...|.......++...||.|+++|++|++.+...  .... .. .....|+.+.++++.++.+
T Consensus        69 ~~~~vvllHG~~~s~--~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~--~~~~-~~-~~~~~dl~~~i~~l~~~~g  142 (432)
T 1gpl_A           69 NRKTRFIIHGFTDSG--ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYS--QASQ-NI-RVVGAEVAYLVQVLSTSLN  142 (432)
T ss_dssp             TSEEEEEECCTTCCT--TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHH--HHHH-HH-HHHHHHHHHHHHHHHHHHC
T ss_pred             CCCeEEEECCCCCCC--CchHHHHHHHHHHhcCCcEEEEEECccccCccch--hhHh-hH-HHHHHHHHHHHHHHHHhcC
Confidence            458899999988763  1334432344444436999999999987654321  1111 00 1235677788888865333


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                       ++.+++.++||||||.+|+.++.++|. +++.+++..|..
T Consensus       143 -~~~~~i~lvGhSlGg~vA~~~a~~~p~-~v~~iv~l~pa~  181 (432)
T 1gpl_A          143 -YAPENVHIIGHSLGAHTAGEAGKRLNG-LVGRITGLDPAE  181 (432)
T ss_dssp             -CCGGGEEEEEETHHHHHHHHHHHTTTT-CSSEEEEESCBC
T ss_pred             -CCcccEEEEEeCHHHHHHHHHHHhccc-ccceeEEecccc
Confidence             557899999999999999999998875 688888877753

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=98.82  E-value=1.9e-06  Score=89.16  Aligned_cols=253  Identities=10%  Similarity=0.044  Sum_probs=136.4

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecc-ccceEEEEEEeeeccCCccEEEEec
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT-RGRFTVTEILAWDERENNPLLILSH  190 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt-~~~~~~~~~~~~~~~~~~~~~~~~~  190 (790)
                      ..|+|+|||+ |+++....            ..|++++.++++      ...+. .....+. -+.++++++  +++...
T Consensus        48 ~~~~~~~~g~-l~~~~~~~------------~~i~~~d~~~~~------~~~~~~~~~~~~~-~i~~~~dg~--l~v~~~  105 (333)
T 2dg1_A           48 EGLNFDRQGQ-LFLLDVFE------------GNIFKINPETKE------IKRPFVSHKANPA-AIKIHKDGR--LFVCYL  105 (333)
T ss_dssp             EEEEECTTSC-EEEEETTT------------CEEEEECTTTCC------EEEEEECSSSSEE-EEEECTTSC--EEEEEC
T ss_pred             cCcEECCCCC-EEEEECCC------------CEEEEEeCCCCc------EEEEeeCCCCCcc-eEEECCCCc--EEEEeC
Confidence            3578999998 55544322            279999987764      22222 1112222 235666653  444332


Q ss_pred             ccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEecc---
Q psy463          191 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRV---  267 (790)
Q Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~---  267 (790)
                      . .. .     ....|++++.+++..+..     +..               .........+.++|||++++.....   
T Consensus       106 ~-~~-~-----~~~~i~~~d~~~~~~~~~-----~~~---------------~~~~~~~~~i~~d~~g~l~v~~~~~~~~  158 (333)
T 2dg1_A          106 G-DF-K-----STGGIFAATENGDNLQDI-----IED---------------LSTAYCIDDMVFDSKGGFYFTDFRGYST  158 (333)
T ss_dssp             T-TS-S-----SCCEEEEECTTSCSCEEE-----ECS---------------SSSCCCEEEEEECTTSCEEEEECCCBTT
T ss_pred             C-CC-C-----CCceEEEEeCCCCEEEEE-----Ecc---------------CccCCcccceEECCCCCEEEEecccccc
Confidence            1 10 0     114799999887653211     110               0112346678999999944433321   


Q ss_pred             CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC-CCcccC
Q psy463          268 QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD-QAGIKD  346 (790)
Q Consensus       268 ~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-~~~~~~  346 (790)
                      .....|+.++.++++.+.+.....      ....+.|+|||+.|++...    ..+        .|+++++++ +..   
T Consensus       159 ~~~~~l~~~~~~~~~~~~~~~~~~------~~~~i~~~~dg~~l~v~~~----~~~--------~i~~~d~~~~g~~---  217 (333)
T 2dg1_A          159 NPLGGVYYVSPDFRTVTPIIQNIS------VANGIALSTDEKVLWVTET----TAN--------RLHRIALEDDGVT---  217 (333)
T ss_dssp             BCCEEEEEECTTSCCEEEEEEEES------SEEEEEECTTSSEEEEEEG----GGT--------EEEEEEECTTSSS---
T ss_pred             CCCceEEEEeCCCCEEEEeecCCC------cccceEECCCCCEEEEEeC----CCC--------eEEEEEecCCCcC---
Confidence            123469999988877766654321      1346899999998875443    223        689999853 320   


Q ss_pred             CCcccc------c-CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEE
Q psy463          347 KVPVPL------T-RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGAT  419 (790)
Q Consensus       347 ~~~~~l------t-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~  419 (790)
                        ...+      . .+...... +.++++|+ +++.....    ..|++++.++  .....+..... ..+.......+.
T Consensus       218 --~~~~~~~~~~~~~~~~~~~~-i~~d~~G~-l~v~~~~~----~~v~~~d~~g--~~~~~~~~~~~-~~g~~~~~~~~~  286 (333)
T 2dg1_A          218 --IQPFGATIPYYFTGHEGPDS-CCIDSDDN-LYVAMYGQ----GRVLVFNKRG--YPIGQILIPGR-DEGHMLRSTHPQ  286 (333)
T ss_dssp             --EEEEEEEEEEECCSSSEEEE-EEEBTTCC-EEEEEETT----TEEEEECTTS--CEEEEEECTTG-GGTCSCBCCEEE
T ss_pred             --cccccceEEEecCCCCCCCc-eEECCCCC-EEEEEcCC----CEEEEECCCC--CEEEEEEcCCC-ccccccCcceEE
Confidence              1111      0 11112233 78899987 55544332    3677887754  22233321100 000001456788


Q ss_pred             EecCCcEEEEEeecC---CCCeEEEEecC
Q psy463          420 FSTNVSYYVLSCIGP---GIPEIMLFDKT  445 (790)
Q Consensus       420 ~s~dg~~~~~~~~~~---~~~~i~~~~~~  445 (790)
                      |++|++.|+++....   ....|+.+++.
T Consensus       287 ~~~dg~~L~v~~~~g~~~~~~~l~~~~~~  315 (333)
T 2dg1_A          287 FIPGTNQLIICSNDIEMGGGSMLYTVNGF  315 (333)
T ss_dssp             ECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred             ECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence            999998887765542   23457776654

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.82  E-value=1.6e-06  Score=88.11  Aligned_cols=237  Identities=10%  Similarity=0.070  Sum_probs=132.5

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|.|+|+++.|+++.....            .|++++.+++.      ...+... ..+. -..++++++  ++.... 
T Consensus        16 Egp~w~~~~~~l~~~d~~~~------------~i~~~d~~~~~------~~~~~~~-~~~~-~i~~~~dG~--l~v~~~-   72 (297)
T 3g4e_A           16 ESPVWEEVSNSLLFVDIPAK------------KVCRWDSFTKQ------VQRVTMD-APVS-SVALRQSGG--YVATIG-   72 (297)
T ss_dssp             EEEEEETTTTEEEEEETTTT------------EEEEEETTTCC------EEEEECS-SCEE-EEEEBTTSS--EEEEET-
T ss_pred             cCCeEECCCCEEEEEECCCC------------EEEEEECCCCc------EEEEeCC-CceE-EEEECCCCC--EEEEEC-
Confidence            46899999999988764333            89999988763      1111111 1122 235566554  333321 


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE-ecc---
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV-NRV---  267 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~-~r~---  267 (790)
                                  ..|++++.++++.+.+      ...           + ..........+.++|||++.+.. ...   
T Consensus        73 ------------~~l~~~d~~~g~~~~~------~~~-----------~-~~~~~~~~~di~~d~dG~l~~~~~~~~~~~  122 (297)
T 3g4e_A           73 ------------TKFCALNWKEQSAVVL------ATV-----------D-NDKKNNRFNDGKVDPAGRYFAGTMAEETAP  122 (297)
T ss_dssp             ------------TEEEEEETTTTEEEEE------EEC-----------C-TTCSSEEEEEEEECTTSCEEEEEEECCSBT
T ss_pred             ------------CeEEEEECCCCcEEEE------Eec-----------C-CCCCCCCCCCEEECCCCCEEEecCCccccc
Confidence                        5899999887753221      100           0 00112346778999999943332 221   


Q ss_pred             ----CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEc--CCC
Q psy463          268 ----QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL--DDQ  341 (790)
Q Consensus       268 ----~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~--~~~  341 (790)
                          .....||.++.+ ++...+.....      ....+.|||||+.+++..+    ..        ..|+++++  .++
T Consensus       123 ~~~~~~~~~l~~~d~~-g~~~~~~~~~~------~pngi~~spdg~~lyv~~~----~~--------~~i~~~~~d~~~G  183 (297)
T 3g4e_A          123 AVLERHQGALYSLFPD-HHVKKYFDQVD------ISNGLDWSLDHKIFYYIDS----LS--------YSVDAFDYDLQTG  183 (297)
T ss_dssp             TBCCTTCEEEEEECTT-SCEEEEEEEES------BEEEEEECTTSCEEEEEEG----GG--------TEEEEEEECTTTC
T ss_pred             ccccCCCcEEEEEECC-CCEEEEeeccc------cccceEEcCCCCEEEEecC----CC--------CcEEEEeccCCCC
Confidence                123469999876 44444443221      1347899999998875443    22        36888876  344


Q ss_pred             CcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc-eeeecccccCCCcccEEEEEE
Q psy463          342 AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE-CITCDLLTSANQKCSYSGATF  420 (790)
Q Consensus       342 ~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~~~  420 (790)
                      +.........+........+ +.++++|+ |++....+    ..|++++.++  ++.. .+..       ......++.|
T Consensus       184 ~~~~~~~~~~~~~~~~~p~g-~~~d~~G~-lwva~~~~----~~v~~~d~~t--G~~~~~i~~-------p~~~~t~~~f  248 (297)
T 3g4e_A          184 QISNRRSVYKLEKEEQIPDG-MCIDAEGK-LWVACYNG----GRVIRLDPVT--GKRLQTVKL-------PVDKTTSCCF  248 (297)
T ss_dssp             CEEEEEEEEECCGGGCEEEE-EEEBTTSC-EEEEEETT----TEEEEECTTT--CCEEEEEEC-------SSSBEEEEEE
T ss_pred             cccCcEEEEECCCCCCCCCe-eEECCCCC-EEEEEcCC----CEEEEEcCCC--ceEEEEEEC-------CCCCceEEEE
Confidence            30000000111111122233 67899985 66665543    3688898874  3432 2221       2235677889


Q ss_pred             e-cCCcEEEEEeecCC
Q psy463          421 S-TNVSYYVLSCIGPG  435 (790)
Q Consensus       421 s-~dg~~~~~~~~~~~  435 (790)
                      + ||++.++++....+
T Consensus       249 ~g~d~~~L~vt~~~~~  264 (297)
T 3g4e_A          249 GGKNYSEMYVTCARDG  264 (297)
T ss_dssp             ESGGGCEEEEEEBCTT
T ss_pred             eCCCCCEEEEEcCCcC
Confidence            8 89988877765544

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=98.82  E-value=4.4e-07  Score=106.82  Aligned_cols=237  Identities=9%  Similarity=0.057  Sum_probs=144.9

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ..+|||||+.|+.... +            +.|.++++.++.     ....++.....+. -..|+++++  .+..... 
T Consensus        18 ~i~~sp~~~~la~~~~-~------------g~v~iwd~~~~~-----~~~~~~~~~~~v~-~~~~s~~~~--~l~~~~~-   75 (814)
T 3mkq_A           18 GIDFHPTEPWVLTTLY-S------------GRVEIWNYETQV-----EVRSIQVTETPVR-AGKFIARKN--WIIVGSD-   75 (814)
T ss_dssp             EEEECSSSSEEEEEET-T------------SEEEEEETTTTE-----EEEEEECCSSCEE-EEEEEGGGT--EEEEEET-
T ss_pred             EEEECCCCCEEEEEeC-C------------CEEEEEECCCCc-----eEEEEecCCCcEE-EEEEeCCCC--EEEEEeC-
Confidence            3589999999887552 1            278888987763     2344443333333 357777765  3332221 


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                                ...|.++++.+++.     ...+.                 .....+..+.|+|||+.++....+.   .
T Consensus        76 ----------dg~i~vw~~~~~~~-----~~~~~-----------------~~~~~v~~~~~s~~~~~l~~~~~dg---~  120 (814)
T 3mkq_A           76 ----------DFRIRVFNYNTGEK-----VVDFE-----------------AHPDYIRSIAVHPTKPYVLSGSDDL---T  120 (814)
T ss_dssp             ----------TSEEEEEETTTCCE-----EEEEE-----------------CCSSCEEEEEECSSSSEEEEEETTS---E
T ss_pred             ----------CCeEEEEECCCCcE-----EEEEe-----------------cCCCCEEEEEEeCCCCEEEEEcCCC---E
Confidence                      15788889887753     22233                 4566788999999999655554432   3


Q ss_pred             EEEEECCCC-ceeEEEEEeCCCcccccCCceeEcc-CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463          273 ITRCSINEG-TCDVVFSRDLDRGWFEPFDHLRFSS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  350 (790)
Q Consensus       273 i~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~sp-Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~  350 (790)
                      |.++++.++ .........  ..   ......|+| ||+.|+ +.+    .+|        .|.++|+.+++     ...
T Consensus       121 i~vw~~~~~~~~~~~~~~~--~~---~v~~~~~~p~~~~~l~-~~~----~dg--------~v~vwd~~~~~-----~~~  177 (814)
T 3mkq_A          121 VKLWNWENNWALEQTFEGH--EH---FVMCVAFNPKDPSTFA-SGC----LDR--------TVKVWSLGQST-----PNF  177 (814)
T ss_dssp             EEEEEGGGTSEEEEEEECC--SS---CEEEEEEETTEEEEEE-EEE----TTS--------EEEEEETTCSS-----CSE
T ss_pred             EEEEECCCCceEEEEEcCC--CC---cEEEEEEEcCCCCEEE-EEe----CCC--------eEEEEECCCCc-----cee
Confidence            888888876 333333221  11   134789999 777666 554    455        68999987765     133


Q ss_pred             cccCCC-eEEeEEEeeec--CCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcE
Q psy463          351 PLTRGR-FTVTEILAWDE--KENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSY  426 (790)
Q Consensus       351 ~lt~~~-~~~~~~~~~s~--dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~  426 (790)
                      .+..+. ..+.. +.|+|  +++.|+..+.+     ..|...++..  ++. ..+..       ....+..+.|+|++++
T Consensus       178 ~~~~~~~~~v~~-~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~--~~~~~~~~~-------~~~~v~~~~~~~~~~~  242 (814)
T 3mkq_A          178 TLTTGQERGVNY-VDYYPLPDKPYMITASDD-----LTIKIWDYQT--KSCVATLEG-------HMSNVSFAVFHPTLPI  242 (814)
T ss_dssp             EEECCCTTCCCE-EEECCSTTCCEEEEECTT-----SEEEEEETTT--TEEEEEEEC-------CSSCEEEEEECSSSSE
T ss_pred             EEecCCCCCEEE-EEEEECCCCCEEEEEeCC-----CEEEEEECCC--CcEEEEEcC-------CCCCEEEEEEcCCCCE
Confidence            333222 23333 78888  88877766555     3566667655  322 22221       3456788999999997


Q ss_pred             EEEEeecCCCCeEEEEecCCC
Q psy463          427 YVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       427 ~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      ++....   -..|.++++.++
T Consensus       243 l~~~~~---dg~v~vwd~~~~  260 (814)
T 3mkq_A          243 IISGSE---DGTLKIWNSSTY  260 (814)
T ss_dssp             EEEEET---TSCEEEEETTTC
T ss_pred             EEEEeC---CCeEEEEECCCC
Confidence            765532   245788888764

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=98.82  E-value=1.1e-06  Score=93.49  Aligned_cols=171  Identities=10%  Similarity=0.049  Sum_probs=99.7

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEe-CCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRD-LDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ....+..+.|+||| .++....+.   .|.++|+.+++........ ....-........|+|||+.|+ +.+    .++
T Consensus       185 ~~~~i~~~~~~~~~-~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~-~~~----~d~  255 (397)
T 1sq9_A          185 PSQFATSVDISERG-LIATGFNNG---TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA-IAH----DSN  255 (397)
T ss_dssp             SCCCCCEEEECTTS-EEEEECTTS---EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEE-EEE----EET
T ss_pred             CCCCceEEEECCCc-eEEEEeCCC---cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEE-EEe----cCC
Confidence            34556789999999 666654432   3899999888765544420 0000001245789999999887 454    231


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccC-------------CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTR-------------GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~-------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~  390 (790)
                      .     ...|.++|+.+++     ....+..             ....+.. +.|+|+++.|+..+.+     ..|+..+
T Consensus       256 ~-----~g~i~i~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d-----g~i~iwd  319 (397)
T 1sq9_A          256 S-----FGCITLYETEFGE-----RIGSLSVPTHSSQASLGEFAHSSWVMS-LSFNDSGETLCSAGWD-----GKLRFWD  319 (397)
T ss_dssp             T-----EEEEEEEETTTCC-----EEEEECBC--------CCBSBSSCEEE-EEECSSSSEEEEEETT-----SEEEEEE
T ss_pred             C-----CceEEEEECCCCc-----ccceeccCcccccccccccccCCcEEE-EEECCCCCEEEEEeCC-----CeEEEEE
Confidence            0     2379999998776     1333433             3334444 8899999987776655     4566667


Q ss_pred             cCCCCCCc-ceeeecccccCCC---------------cccEEEEEEecCC----------cEEEEEeecCCCCeEEEEec
Q psy463          391 IADPTATP-ECITCDLLTSANQ---------------KCSYSGATFSTNV----------SYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       391 ~~~~~~~~-~~lt~~~~~~~~~---------------~~~~~~~~~s~dg----------~~~~~~~~~~~~~~i~~~~~  444 (790)
                      +..  ++. ..+..... ....               ...+..+.|+|++          ++++... .  -..|.++++
T Consensus       320 ~~~--~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~-~--dg~i~iw~~  393 (397)
T 1sq9_A          320 VKT--KERITTLNMHCD-DIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVC-L--DRSIRWFRE  393 (397)
T ss_dssp             TTT--TEEEEEEECCGG-GCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEE-T--TTEEEEEEE
T ss_pred             cCC--CceeEEEecccC-cccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEec-C--CCcEEEEEc
Confidence            755  322 12220000 0012               5678889999998          4554432 2  235666665


Q ss_pred             CC
Q psy463          445 TG  446 (790)
Q Consensus       445 ~~  446 (790)
                      ++
T Consensus       394 ~~  395 (397)
T 1sq9_A          394 AG  395 (397)
T ss_dssp             EC
T ss_pred             CC
Confidence            44

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=98.82  E-value=1.2e-06  Score=92.10  Aligned_cols=116  Identities=15%  Similarity=0.159  Sum_probs=70.9

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECC------------------CCceeEEEEEeCCCcccccCCceeEcc
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSIN------------------EGTCDVVFSRDLDRGWFEPFDHLRFSS  306 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~------------------~g~~~~l~~~~~~~~~~~~~~~~~~sp  306 (790)
                      ....+..+.|+|||++++....+.   .|.++|+.                  .+++...+.  ....   ....+.|+|
T Consensus       141 ~~~~i~~~~~~~~~~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~v~~~~~~~  212 (372)
T 1k8k_C          141 IRSTVLSLDWHPNSVLLAAGSCDF---KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--SSCG---WVHGVCFSA  212 (372)
T ss_dssp             CCSCEEEEEECTTSSEEEEEETTS---CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--CCSS---CEEEEEECS
T ss_pred             cCCCeeEEEEcCCCCEEEEEcCCC---CEEEEEcccccccccccccccccccchhhheEecC--CCCC---eEEEEEECC
Confidence            355688999999999665554432   27777753                  333332221  1111   134789999


Q ss_pred             CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEE
Q psy463          307 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHM  386 (790)
Q Consensus       307 Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l  386 (790)
                      ||+.|+ +.+    .+|        .|.++|+.+++     ....+......+.. +.|+|+++.|+ .+.++.   ..+
T Consensus       213 ~~~~l~-~~~----~d~--------~i~i~d~~~~~-----~~~~~~~~~~~v~~-~~~~~~~~~l~-~~~d~~---i~i  269 (372)
T 1k8k_C          213 NGSRVA-WVS----HDS--------TVCLADADKKM-----AVATLASETLPLLA-VTFITESSLVA-AGHDCF---PVL  269 (372)
T ss_dssp             SSSEEE-EEE----TTT--------EEEEEEGGGTT-----EEEEEECSSCCEEE-EEEEETTEEEE-EETTSS---CEE
T ss_pred             CCCEEE-EEe----CCC--------EEEEEECCCCc-----eeEEEccCCCCeEE-EEEecCCCEEE-EEeCCe---EEE
Confidence            999777 454    455        68999997766     23344444434444 88999997554 444433   566


Q ss_pred             EEEEc
Q psy463          387 YRINI  391 (790)
Q Consensus       387 ~~~~~  391 (790)
                      |.+.-
T Consensus       270 ~~~~~  274 (372)
T 1k8k_C          270 FTYDS  274 (372)
T ss_dssp             EEEET
T ss_pred             EEccC
Confidence            66654

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.81  E-value=1.1e-05  Score=89.23  Aligned_cols=356  Identities=10%  Similarity=0.024  Sum_probs=187.3

Q ss_pred             ceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC
Q psy463           11 SALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI   90 (790)
Q Consensus        11 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~   90 (790)
                      ..+.|+.|...++|++..+. ..+.++....++      ....+.... ....+.+++|++.++-.++..   .+.+++.
T Consensus       157 ~~~~~~~d~~~~~~V~~~~~-~~V~viD~~t~~------v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg---~V~viD~  225 (567)
T 1qks_A          157 TQQMNDWDLENLFSVTLRDA-GQIALIDGSTYE------IKTVLDTGY-AVHISRLSASGRYLFVIGRDG---KVNMIDL  225 (567)
T ss_dssp             SSCCSCCCGGGEEEEEETTT-TEEEEEETTTCC------EEEEEECSS-CEEEEEECTTSCEEEEEETTS---EEEEEET
T ss_pred             cccccccCCCceEEEEeCCC-CeEEEEECCCCe------EEEEEeCCC-CccceEECCCCCEEEEEcCCC---eEEEEEC
Confidence            35678999888999887543 457777765553      010111111 112345677777655444432   4666776


Q ss_pred             C--CCeeeEEEeecCCCCccccCCccccc----cCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceec
Q psy463           91 N--EGTCDVVFSRDLDRGWFEPFDHLRFS----SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  164 (790)
Q Consensus        91 ~--~~~~~~~~~~~~~~~~~~~~~~~~~s----pdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~l  164 (790)
                      .  +++..  .+.....    .+....||    |||++++..+....            ++.++|..+.+     ....+
T Consensus       226 ~~~t~~~v--~~i~~G~----~P~~ia~s~~~~pDGk~l~v~n~~~~------------~v~ViD~~t~~-----~~~~i  282 (567)
T 1qks_A          226 WMKEPTTV--AEIKIGS----EARSIETSKMEGWEDKYAIAGAYWPP------------QYVIMDGETLE-----PKKIQ  282 (567)
T ss_dssp             TSSSCCEE--EEEECCS----EEEEEEECCSTTCTTTEEEEEEEETT------------EEEEEETTTCC-----EEEEE
T ss_pred             CCCCCcEe--EEEecCC----CCceeEEccccCCCCCEEEEEEccCC------------eEEEEECCCCc-----EEEEE
Confidence            4  44322  2222211    11234789    79999887765443            78899876653     22222


Q ss_pred             cccce-----------EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCcccccccccee
Q psy463          165 TRGRF-----------TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT  233 (790)
Q Consensus       165 t~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~  233 (790)
                      .-+..           .+..+.. .+++.  .+++...          ....|+++|....+..++   ..+        
T Consensus       283 ~~~~~~~~~~~~~p~~rva~i~~-s~~~~--~~vv~~~----------~~g~v~~vd~~~~~~~~v---~~i--------  338 (567)
T 1qks_A          283 STRGMTYDEQEYHPEPRVAAILA-SHYRP--EFIVNVK----------ETGKILLVDYTDLNNLKT---TEI--------  338 (567)
T ss_dssp             ECCEECTTTCCEESCCCEEEEEE-CSSSS--EEEEEET----------TTTEEEEEETTCSSEEEE---EEE--------
T ss_pred             eccccccccccccCCCceEEEEE-cCCCC--EEEEEec----------CCCeEEEEecCCCcccee---eee--------
Confidence            21110           1222211 12211  3443331          226899998765431111   011        


Q ss_pred             ehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee-EccCCCEEE
Q psy463          234 EILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR-FSSDGKKML  312 (790)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~-~spDg~~i~  312 (790)
                                ..........|+|||++++..++..+  .|.++|+++++........+...+  +...+. ++||+..++
T Consensus       339 ----------~~~~~~~d~~~~pdgr~~~va~~~sn--~V~ViD~~t~kl~~~i~vgg~~Ph--pg~g~~~~~p~~g~v~  404 (567)
T 1qks_A          339 ----------SAERFLHDGGLDGSHRYFITAANARN--KLVVIDTKEGKLVAIEDTGGQTPH--PGRGANFVHPTFGPVW  404 (567)
T ss_dssp             ----------ECCSSEEEEEECTTSCEEEEEEGGGT--EEEEEETTTTEEEEEEECSSSSBC--CTTCEEEEETTTEEEE
T ss_pred             ----------eccccccCceECCCCCEEEEEeCCCC--eEEEEECCCCcEEEEEeccCcCCC--CccceeeECCCCCcEE
Confidence                      11233557789999997777665443  388999999976655432011111  112344 488888776


Q ss_pred             EEEccccccCCCCCcCcccEEEEEEcCCCCc-ccCC-CcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCc---eEEEE
Q psy463          313 LILSHNQESDGSTPVDSWDHLTFIDLDDQAG-IKDK-VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPI---VQHMY  387 (790)
Q Consensus       313 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~-~~~~-~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~---~~~l~  387 (790)
                      ++..     -|      ...|.++|.++++. .... ..+.+...... ..++..+||++.+|+.... +|.   ...|.
T Consensus       405 ~t~~-----~g------~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g-~~~i~~~p~~~~l~v~~~~-~~~~~~~~~v~  471 (567)
T 1qks_A          405 ATSH-----MG------DDSVALIGTDPEGHPDNAWKILDSFPALGGG-SLFIKTHPNSQYLYVDATL-NPEAEISGSVA  471 (567)
T ss_dssp             EEEB-----SS------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC-CCCEECCTTCSEEEEECTT-CSSHHHHTCEE
T ss_pred             EeCC-----CC------CCeEEEecCCCCCCccccCEEEEEEecCCCC-CEEEEeCCCCCeEEEecCC-CCCcccCceEE
Confidence            4332     23      23688999876320 0000 11222211100 1124568999988876532 221   24777


Q ss_pred             EEEcCCC--CCCc---ceeeec-ccccCCCcccEEEEEEecCCcEEEEEeec-CC-CCeEEEEecCCCeEEE
Q psy463          388 RINIADP--TATP---ECITCD-LLTSANQKCSYSGATFSTNVSYYVLSCIG-PG-IPEIMLFDKTGQRLLY  451 (790)
Q Consensus       388 ~~~~~~~--~~~~---~~lt~~-~~~~~~~~~~~~~~~~s~dg~~~~~~~~~-~~-~~~i~~~~~~~~~~~~  451 (790)
                      ++++++.  +|+.   +.+... ...+..+......+.|++||++++++.-+ .+ ...|.++|.++.++..
T Consensus       472 v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~  543 (567)
T 1qks_A          472 VFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKH  543 (567)
T ss_dssp             EEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred             EEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEE
Confidence            8887652  1112   222110 00011123456779999999999888533 32 6789999998876653

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=98.81  E-value=1.8e-06  Score=90.74  Aligned_cols=266  Identities=9%  Similarity=-0.093  Sum_probs=129.2

Q ss_pred             cccCCCcceeEeeeecccceeEEEEeeCC-CCeeeEEEeecCCCCccccCCccccccCCceE-EEEeecCCCCCCCCCCc
Q psy463           63 RVNWANESVVAAWVNRVQNRARITRCSIN-EGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKM-LLILSHNQESDGSTPVD  140 (790)
Q Consensus        63 ~~~w~~~~~~~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i-~~~~~~~~~~~~~~~~g  140 (790)
                      .+.|+++++.+.-.+..    .+.+++.. +++...+.......    .....+|+|||+++ ++......  -..|. .
T Consensus        44 ~~a~spdg~~l~~~~~~----~v~~~~~~~~g~~~~~~~~~~~g----~~~~~~~spdg~~l~~~~~~~~~--~~~~~-~  112 (365)
T 1jof_A           44 WMTFDHERKNIYGAAMK----KWSSFAVKSPTEIVHEASHPIGG----HPRANDADTNTRAIFLLAAKQPP--YAVYA-N  112 (365)
T ss_dssp             EEEECTTSSEEEEEEBT----EEEEEEEEETTEEEEEEEEECCS----SGGGGCTTSCCEEEEEEECSSTT--CCEEE-E
T ss_pred             EEEECCCCCEEEEEccc----eEEEEEECCCCCEEEeeEeecCC----CCccEEECCCCCEEEEEEecCCc--ceecc-c
Confidence            45677788766544443    56666664 66655443322111    12346899999974 44442000  00000 0


Q ss_pred             ----CCcEEEEEEcCC-cCCccCCcceeccc---cceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecC
Q psy463          141 ----SWDHLTFIDLDD-QAGIKDKVPVPLTR---GRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLD  212 (790)
Q Consensus       141 ----~~~~l~~~~~~~-~~~~~~~~~~~lt~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  212 (790)
                          .-+.+.+++++. ++     ....+..   .......-..|+++++  .+|++...          ...|++++++
T Consensus       113 ~~~~~~g~v~v~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~spdG~--~l~~~~~~----------~~~v~~~~~~  175 (365)
T 1jof_A          113 PFYKFAGYGNVFSVSETGK-----LEKNVQNYEYQENTGIHGMVFDPTET--YLYSADLT----------ANKLWTHRKL  175 (365)
T ss_dssp             EESSSCCEEEEEEECTTCC-----EEEEEEEEECCTTCCEEEEEECTTSS--EEEEEETT----------TTEEEEEEEC
T ss_pred             eeecCCceEEEEccCCCCc-----CcceEeeEEeCCCCcceEEEECCCCC--EEEEEcCC----------CCEEEEEEEC
Confidence                012566666642 32     1122221   1111223356788776  45554321          1578888887


Q ss_pred             -CcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeE-EEEE-
Q psy463          213 -DQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDV-VFSR-  289 (790)
Q Consensus       213 -~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~-l~~~-  289 (790)
                       +|+...+   ..+.               .+........+.|||||+.++..+...+.-.++.++.++|+... +... 
T Consensus       176 ~~g~~~~~---~~~~---------------~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~  237 (365)
T 1jof_A          176 ASGEVELV---GSVD---------------APDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP  237 (365)
T ss_dssp             TTSCEEEE---EEEE---------------CSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE
T ss_pred             CCCCEEEe---eeEe---------------cCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE
Confidence             5542111   0010               00112345678999999977766654444456666666776532 1111 


Q ss_pred             eCCCcccc---------cCCcee-EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcC-CCCcccCCCccc----ccC
Q psy463          290 DLDRGWFE---------PFDHLR-FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLD-DQAGIKDKVPVP----LTR  354 (790)
Q Consensus       290 ~~~~~~~~---------~~~~~~-~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~-~~~~~~~~~~~~----lt~  354 (790)
                      ....++..         ....+. |||||+.|+ +...  ..+..    ....|.+++++ +++      ...    +..
T Consensus       238 ~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~-v~~~--~~~~~----~~~~i~v~~~~~~g~------~~~~~~~~~~  304 (365)
T 1jof_A          238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMF-ASSR--ANKFE----LQGYIAGFKLRDCGS------IEKQLFLSPT  304 (365)
T ss_dssp             SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE-EEEE--ESSTT----SCCEEEEEEECTTSC------EEEEEEEEEC
T ss_pred             cCCCCcCCcccccccccccccEEEECCCCCEEE-EECC--CCCCC----CCCeEEEEEECCCCC------EEEeeeeeec
Confidence            11011100         123678 999999887 3431  11100    01157777775 454      332    111


Q ss_pred             CCeEEeEEEeeec---CCCEEEEEEcCCCCceEEEEEEE
Q psy463          355 GRFTVTEILAWDE---KENNVYFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       355 ~~~~~~~~~~~s~---dg~~l~~~~~~~~~~~~~l~~~~  390 (790)
                      ....... ++|+|   ||++|++.....+  ...||.++
T Consensus       305 ~~~~~~~-~a~sp~~~dg~~l~v~~~~~~--~v~v~~~~  340 (365)
T 1jof_A          305 PTSGGHS-NAVSPCPWSDEWMAITDDQEG--WLEIYRWK  340 (365)
T ss_dssp             SSCCTTC-CCEEECTTCTTEEEEECSSSC--EEEEEEEE
T ss_pred             CCCCccc-ceecCCCcCCCEEEEEEcCCC--eEEEEEEc
Confidence            1111222 67899   8998877655422  24555554

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=98.81  E-value=2.7e-06  Score=97.97  Aligned_cols=241  Identities=12%  Similarity=0.110  Sum_probs=128.4

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+|||+.|+-.+ .+            +.|.++++.++.     ....+..+...+.. ..|+++++.  ++...   
T Consensus       436 v~~s~~g~~l~sgs-~D------------g~v~vwd~~~~~-----~~~~~~~h~~~v~~-~~~s~~~~~--l~s~s---  491 (694)
T 3dm0_A          436 VVLSSDGQFALSGS-WD------------GELRLWDLAAGV-----STRRFVGHTKDVLS-VAFSLDNRQ--IVSAS---  491 (694)
T ss_dssp             EEECTTSSEEEEEE-TT------------SEEEEEETTTTE-----EEEEEECCSSCEEE-EEECTTSSC--EEEEE---
T ss_pred             EEECCCCCEEEEEe-CC------------CcEEEEECCCCc-----ceeEEeCCCCCEEE-EEEeCCCCE--EEEEe---
Confidence            36799998776433 22            278888987763     23334333333433 356666542  22211   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc--EEEEEeccCcce
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV--VAAWVNRVQNRA  271 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~~~~~~r~~~~~  271 (790)
                              ....|.+.|+.+...      ..+..             ........+..+.|+|++.  .++....+.   
T Consensus       492 --------~D~~i~iwd~~~~~~------~~~~~-------------~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~---  541 (694)
T 3dm0_A          492 --------RDRTIKLWNTLGECK------YTISE-------------GGEGHRDWVSCVRFSPNTLQPTIVSASWDK---  541 (694)
T ss_dssp             --------TTSCEEEECTTSCEE------EEECS-------------STTSCSSCEEEEEECSCSSSCEEEEEETTS---
T ss_pred             --------CCCEEEEEECCCCcc------eeecc-------------CCCCCCCcEEEEEEeCCCCcceEEEEeCCC---
Confidence                    113555556544321      11100             0003345678899999984  444444332   


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      .|.++|+.++++......  ..+   ......|||||+.|+ +.+    .+|        .|.++|+.+++     ....
T Consensus       542 ~v~vwd~~~~~~~~~~~~--h~~---~v~~v~~spdg~~l~-sg~----~Dg--------~i~iwd~~~~~-----~~~~  598 (694)
T 3dm0_A          542 TVKVWNLSNCKLRSTLAG--HTG---YVSTVAVSPDGSLCA-SGG----KDG--------VVLLWDLAEGK-----KLYS  598 (694)
T ss_dssp             CEEEEETTTCCEEEEECC--CSS---CEEEEEECTTSSEEE-EEE----TTS--------BCEEEETTTTE-----EEEC
T ss_pred             eEEEEECCCCcEEEEEcC--CCC---CEEEEEEeCCCCEEE-EEe----CCC--------eEEEEECCCCc-----eEEE
Confidence            288889988776544321  111   234789999999877 555    456        58888988776     1333


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccc------------cCCCcccEEEE
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLT------------SANQKCSYSGA  418 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~------------~~~~~~~~~~~  418 (790)
                      +... ..+. .++|+|++..++.....      .|...++.+  ++. ..+......            .......+..+
T Consensus       599 ~~~~-~~v~-~~~~sp~~~~l~~~~~~------~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  668 (694)
T 3dm0_A          599 LEAN-SVIH-ALCFSPNRYWLCAATEH------GIKIWDLES--KSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSL  668 (694)
T ss_dssp             CBCS-SCEE-EEEECSSSSEEEEEETT------EEEEEETTT--TEEEEEECCCCC----------------CCCCEEEE
T ss_pred             ecCC-CcEE-EEEEcCCCcEEEEEcCC------CEEEEECCC--CCChhhhccccccccccccccccccCCceeEEeeeE
Confidence            3332 2333 37899998866544322      255556554  221 111100000            00011135678


Q ss_pred             EEecCCcEEEEEeecCCCCeEEEEec
Q psy463          419 TFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       419 ~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                      .|||||++|+.... .  ..|.++++
T Consensus       669 ~~spdg~~l~sgs~-D--g~i~iW~i  691 (694)
T 3dm0_A          669 NWSADGSTLFSGYT-D--GVIRVWGI  691 (694)
T ss_dssp             EECTTSSEEEEEET-T--SEEEEEEC
T ss_pred             EEcCCCCEEEEEcC-C--CeEEEEec
Confidence            99999998865432 2  34555554

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=98.80  E-value=7e-06  Score=84.98  Aligned_cols=293  Identities=11%  Similarity=0.091  Sum_probs=149.3

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ...+++||||+..+..+...|+...+|.+.......   ......++.+...+..+.|++++..+.......   .+..+
T Consensus        40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~---~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~---~i~~~  113 (340)
T 4aow_A           40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY---GIPQRALRGHSHFVSDVVISSDGQFALSGSWDG---TLRLW  113 (340)
T ss_dssp             CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS---EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS---EEEEE
T ss_pred             CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc---ceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc---cceEE
Confidence            346788999965444555668888888876532210   001111222233445566777766554333222   23444


Q ss_pred             eCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc
Q psy463           89 SINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR  168 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~  168 (790)
                      +................     .....++++++.|+..+ .++            .+.++++....     .......+.
T Consensus       114 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~s~s-~d~------------~~~~~d~~~~~-----~~~~~~~~~  170 (340)
T 4aow_A          114 DLTTGTTTRRFVGHTKD-----VLSVAFSSDNRQIVSGS-RDK------------TIKLWNTLGVC-----KYTVQDESH  170 (340)
T ss_dssp             ETTTTEEEEEEECCSSC-----EEEEEECTTSSCEEEEE-TTS------------CEEEECTTSCE-----EEEECSSSC
T ss_pred             eecccceeeeecCCCCc-----eeEEEEeecCccceeec-CCC------------eEEEEEeCCCc-----eEEEEeccc
Confidence            44444333322221111     01236688888776433 221            46666654432     111111111


Q ss_pred             eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463          169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV  248 (790)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~  248 (790)
                      ........+.+.....++ ++..          ....|.+.++.+++.     ...+.                 .....
T Consensus       171 ~~~v~~~~~~~~~~~~~~-~s~~----------~d~~i~i~d~~~~~~-----~~~~~-----------------~h~~~  217 (340)
T 4aow_A          171 SEWVSCVRFSPNSSNPII-VSCG----------WDKLVKVWNLANCKL-----KTNHI-----------------GHTGY  217 (340)
T ss_dssp             SSCEEEEEECSCSSSCEE-EEEE----------TTSCEEEEETTTTEE-----EEEEC-----------------CCSSC
T ss_pred             cCcccceEEccCCCCcEE-EEEc----------CCCEEEEEECCCCce-----eeEec-----------------CCCCc
Confidence            112223344443333222 2221          114677778877642     11222                 34556


Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      +..++|+|||++++....+.   .|.++|+.++++........      ......|+|++..++  .+    .++     
T Consensus       218 v~~~~~s~~~~~l~s~s~Dg---~i~iwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~--~~----~d~-----  277 (340)
T 4aow_A          218 LNTVTVSPDGSLCASGGKDG---QAMLWDLNEGKHLYTLDGGD------IINALCFSPNRYWLC--AA----TGP-----  277 (340)
T ss_dssp             EEEEEECTTSSEEEEEETTC---EEEEEETTTTEEEEEEECSS------CEEEEEECSSSSEEE--EE----ETT-----
T ss_pred             EEEEEECCCCCEEEEEeCCC---eEEEEEeccCceeeeecCCc------eEEeeecCCCCceee--cc----CCC-----
Confidence            78899999999666554432   38888998876654443221      134688999987443  33    245     


Q ss_pred             cccEEEEEEcCCCCcccCCCc----ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463          329 SWDHLTFIDLDDQAGIKDKVP----VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~----~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~  390 (790)
                         .|.++|+.++........    .........+.. ++|+|||+.|+-.+.++.   ..||.+.
T Consensus       278 ---~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~s~dg~~l~sgs~Dg~---v~iW~~~  336 (340)
T 4aow_A          278 ---SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS-LAWSADGQTLFAGYTDNL---VRVWQVT  336 (340)
T ss_dssp             ---EEEEEETTTTEEEEEECCC-------CCCCCEEE-EEECTTSSEEEEEETTSC---EEEEEEE
T ss_pred             ---EEEEEECCCCeEEEeccccceeeeccCCCCCEEE-EEECCCCCEEEEEeCCCE---EEEEeCC
Confidence               688888876541000000    011112223444 789999998877666644   5666654

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=98.80  E-value=1.9e-06  Score=89.57  Aligned_cols=241  Identities=12%  Similarity=0.118  Sum_probs=140.7

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+|||+.|+-.+ .++            .|.++++.++.     ....+......+ .-..|+++++  .+....   
T Consensus        61 ~~~s~d~~~l~s~s-~Dg------------~v~iWd~~~~~-----~~~~~~~~~~~v-~~~~~s~~~~--~l~s~~---  116 (340)
T 1got_B           61 MHWGTDSRLLLSAS-QDG------------KLIIWDSYTTN-----KVHAIPLRSSWV-MTCAYAPSGN--YVACGG---  116 (340)
T ss_dssp             EEECTTSSEEEEEE-TTT------------EEEEEETTTCC-----EEEEEECSSSCE-EEEEECTTSS--EEEEEE---
T ss_pred             EEECCCCCEEEEEe-CCC------------cEEEEECCCCC-----cceEeecCCccE-EEEEECCCCC--EEEEEe---
Confidence            47899998766433 222            78888887663     222232222222 2346666654  222221   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                              ....|.++++.+++... .....+.                 .....+....|+||++++.....+.    |
T Consensus       117 --------~d~~v~iw~~~~~~~~~-~~~~~~~-----------------~h~~~v~~~~~~~~~~l~s~s~d~~----i  166 (340)
T 1got_B          117 --------LDNICSIYNLKTREGNV-RVSRELA-----------------GHTGYLSCCRFLDDNQIVTSSGDTT----C  166 (340)
T ss_dssp             --------TTCEEEEEETTTCSBSC-EEEEEEE-----------------CCSSCEEEEEEEETTEEEEEETTSC----E
T ss_pred             --------CCCeEEEEECccCCCcc-eeEEEec-----------------CCCccEEEEEECCCCcEEEEECCCc----E
Confidence                    11466777776543100 0011222                 4456678899999998555443332    8


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      .++|+.++++...+...  .+   ......|+|||+.|+ +.+    .+|        .|.++|+.+++     ....+.
T Consensus       167 ~~wd~~~~~~~~~~~~h--~~---~v~~~~~~~~~~~l~-sg~----~d~--------~v~~wd~~~~~-----~~~~~~  223 (340)
T 1got_B          167 ALWDIETGQQTTTFTGH--TG---DVMSLSLAPDTRLFV-SGA----CDA--------SAKLWDVREGM-----CRQTFT  223 (340)
T ss_dssp             EEEETTTTEEEEEECCC--SS---CEEEEEECTTSSEEE-EEE----TTS--------CEEEEETTTCS-----EEEEEC
T ss_pred             EEEECCCCcEEEEEcCC--CC---ceEEEEECCCCCEEE-EEe----CCC--------cEEEEECCCCe-----eEEEEc
Confidence            89999988765444311  11   134789999999776 555    455        58889988775     133455


Q ss_pred             CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          354 RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       354 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      .+...+.. ++|+|+++.|+..+.++     .|...++..  ++. ..+..     ....+.+..+.|+|+|++++....
T Consensus       224 ~h~~~v~~-v~~~p~~~~l~s~s~d~-----~v~iwd~~~--~~~~~~~~~-----~~~~~~v~~~~~s~~g~~l~~g~~  290 (340)
T 1got_B          224 GHESDINA-ICFFPNGNAFATGSDDA-----TCRLFDLRA--DQELMTYSH-----DNIICGITSVSFSKSGRLLLAGYD  290 (340)
T ss_dssp             CCSSCEEE-EEECTTSSEEEEEETTS-----CEEEEETTT--TEEEEEECC-----TTCCSCEEEEEECTTSSEEEEEET
T ss_pred             CCcCCEEE-EEEcCCCCEEEEEcCCC-----cEEEEECCC--CcEEEEEcc-----CCcccceEEEEECCCCCEEEEECC
Confidence            44445554 88999999887776664     344445544  221 11111     112346788999999998876543


Q ss_pred             cCCCCeEEEEecCCC
Q psy463          433 GPGIPEIMLFDKTGQ  447 (790)
Q Consensus       433 ~~~~~~i~~~~~~~~  447 (790)
                         -..+.++|+...
T Consensus       291 ---d~~i~vwd~~~~  302 (340)
T 1got_B          291 ---DFNCNVWDALKA  302 (340)
T ss_dssp             ---TSEEEEEETTTC
T ss_pred             ---CCeEEEEEcccC
Confidence               245788877553

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.80  E-value=6e-06  Score=86.58  Aligned_cols=299  Identities=9%  Similarity=0.013  Sum_probs=152.5

Q ss_pred             EeCCCCCceEEEEecCCce---eEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeee-------ccccee
Q psy463           14 WFSPSGNNLAYASFDDNRT---VIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVN-------RVQNRA   83 (790)
Q Consensus        14 ~wSPDG~~iaf~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~-------r~~~~~   83 (790)
                      .-+|||+ .+|+....+..   .++++....++      ....+..  .....+.+++|++.++-.+       |....-
T Consensus        27 ~~~~~~~-~~yv~~~~~~~~~~~v~v~D~~t~~------~~~~i~~--g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~   97 (373)
T 2mad_H           27 APGADGR-RSYINLPAHHSAIIQQWVLDAGSGS------ILGHVNG--GFLPNPVAAHSGSEFALASTSFSRIAKGKRTD   97 (373)
T ss_pred             cCCCCCC-EEEEeCCcccCCccEEEEEECCCCe------EEEEecC--CCCCCeEECCCCCEEEEEeccccccccCCCCC
Confidence            4568995 47777531222   66777665443      0111111  1112456777887665554       223334


Q ss_pred             EEEEeeCCCCeeeEEEeec-CCCCcc-ccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcc
Q psy463           84 RITRCSINEGTCDVVFSRD-LDRGWF-EPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  161 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~  161 (790)
                      .+.+++..+.+........ ..+... ..+....|||||++|++.+....           ..|+++| ++++     +.
T Consensus        98 ~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~-----------~~v~viD-~t~~-----~~  160 (373)
T 2mad_H           98 YVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAG-----------PAVGLVV-QGGS-----SD  160 (373)
T ss_pred             eEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCC-----------CeEEEEE-CCCC-----EE
Confidence            5666777665443222111 111110 11235699999999998764321           2799999 8774     33


Q ss_pred             ee-ccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcC--Cccccccccceeehhhc
Q psy463          162 VP-LTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV--PVPLTRGRFTVTEILAW  238 (790)
Q Consensus       162 ~~-lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~lt~~~~~~~~~~~~  238 (790)
                      .. +.-+..     ....+.++.  .|+.....          ..+..+++ +++......  +.. .            
T Consensus       161 ~~~i~~~~~-----~~~~~~~~~--~~~~~~~d----------g~~~~vd~-~g~~~~~~~~~~~~-~------------  209 (373)
T 2mad_H          161 DQLLSSPTC-----YHIHPGAPS--TFYLLCAQ----------GGLAKTDH-AGGAAGAGLVGAML-T------------  209 (373)
T ss_pred             eEEcCCCce-----EEEEeCCCc--eEEEEcCC----------CCEEEEEC-CCcEEEEEeccccc-c------------
Confidence            33 322211     112233332  23332211          35666676 544210000  000 0            


Q ss_pred             ccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEe------CCCcccc-cCCceeEccCCCEE
Q psy463          239 DEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRD------LDRGWFE-PFDHLRFSSDGKKM  311 (790)
Q Consensus       239 ~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~------~~~~~~~-~~~~~~~spDg~~i  311 (790)
                           ........+.+++|+..+++....   ..++++|..++..+.+..-.      ...+|.- ......++|||+++
T Consensus       210 -----~~~p~~~~~~~~~~~~~~~~~~~~---~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~l  281 (373)
T 2mad_H          210 -----AAQNLLTQPAQANKSGRIVWPVYS---GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGI  281 (373)
T ss_pred             -----CCcceeecceeEecCCEEEEEcCC---ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEE
Confidence                 112223346778887744444322   24999999876544332211      0112220 01126789999998


Q ss_pred             EEEEccccc---cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463          312 LLILSHNQE---SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR  388 (790)
Q Consensus       312 ~~~~~~~~~---~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  388 (790)
                      |+......+   +.+      ..+|+++|+++++     ..+.|..+.. .. .+.|+|||++++|.++.+.   ..|.+
T Consensus       282 yV~~~~~~~~~~~~~------~~~V~VID~~t~~-----vv~~i~~g~~-p~-~i~~s~Dg~~~l~v~~~~~---~~V~V  345 (373)
T 2mad_H          282 YLLTSEQSAWKLHAA------AKEVTSVTGLVGQ-----TSSQISLGHD-VD-AISVAQDGGPDLYALSAGT---EVLHI  345 (373)
T ss_pred             EEEeccCCcccccCC------CCeEEEEECCCCE-----EEEEEECCCC-cC-eEEECCCCCeEEEEEcCCC---CeEEE
Confidence            854431000   011      2479999998887     2344543321 22 3789999997777777544   68999


Q ss_pred             EEcCC
Q psy463          389 INIAD  393 (790)
Q Consensus       389 ~~~~~  393 (790)
                      +++++
T Consensus       346 iD~~t  350 (373)
T 2mad_H          346 YDAGA  350 (373)
T ss_pred             EECCC
Confidence            99877

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=98.79  E-value=3.2e-06  Score=88.42  Aligned_cols=124  Identities=17%  Similarity=0.222  Sum_probs=74.9

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .....+..++|||||++++....+..  .|.+.|+.++++...+......   .......|||||+.|+ +.+    .++
T Consensus       193 ~h~~~v~~~~~s~~g~~l~s~s~d~~--~v~iwd~~~~~~~~~~~~g~h~---~~v~~~~~s~~~~~l~-s~s----~d~  262 (355)
T 3vu4_A          193 AHTNPIKMVRLNRKSDMVATCSQDGT--IIRVFKTEDGVLVREFRRGLDR---ADVVDMKWSTDGSKLA-VVS----DKW  262 (355)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTCS--EEEEEETTTCCEEEEEECTTCC---SCEEEEEECTTSCEEE-EEE----TTC
T ss_pred             ccCCceEEEEECCCCCEEEEEeCCCC--EEEEEECCCCcEEEEEEcCCCC---CcEEEEEECCCCCEEE-EEE----CCC
Confidence            45567889999999997666554321  2788899988776554411011   1245789999999887 555    455


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccC--------CCe------------EEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTR--------GRF------------TVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~--------~~~------------~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                              .|.++|+..+....   ...+..        ..+            .....++|++||+.|+....++.   
T Consensus       263 --------~v~iw~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~---  328 (355)
T 3vu4_A          263 --------TLHVFEIFNDQDNK---RHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRM---  328 (355)
T ss_dssp             --------EEEEEESSCCSCCC---SEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTE---
T ss_pred             --------EEEEEEccCCCCcc---cccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCe---
Confidence                    68888886543100   111100        000            00123789999998877766543   


Q ss_pred             EEEEEEEc
Q psy463          384 QHMYRINI  391 (790)
Q Consensus       384 ~~l~~~~~  391 (790)
                      .++|.+..
T Consensus       329 ~~~~~~~~  336 (355)
T 3vu4_A          329 IETFKVVF  336 (355)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEc
Confidence            56666654

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=98.79  E-value=2.5e-06  Score=90.20  Aligned_cols=295  Identities=12%  Similarity=0.087  Sum_probs=149.9

Q ss_pred             cccccCCCcceeEeeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCc
Q psy463           61 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  140 (790)
Q Consensus        61 ~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g  140 (790)
                      +..+.|++++..+.-...   .-.+.+++..++.+...+....  .++   ....|+|||+.|+-.+ .           
T Consensus        69 V~~~~~sp~~~~l~s~s~---D~~v~iWd~~~~~~~~~~~~h~--~~v---~~~~~s~~g~~las~~-~-----------  128 (380)
T 3iz6_a           69 VYSLDWTPEKNWIVSASQ---DGRLIVWNALTSQKTHAIKLHC--PWV---MECAFAPNGQSVACGG-L-----------  128 (380)
T ss_dssp             EEEEEECTTSSCEEEEET---TSEEEEEETTTTEEEEEEECCC--TTC---CCCEECTTSSEEEECC-S-----------
T ss_pred             EEEEEEcCCCCEEEEEeC---CCeEEEEECCCCccceEEecCC--CCE---EEEEECCCCCEEEEee-C-----------
Confidence            445566666554433222   2356677777776655444322  222   3458999999877422 1           


Q ss_pred             CCcEEEEEEcCCcCCc--cCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCccccc
Q psy463          141 SWDHLTFIDLDDQAGI--KDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIK  218 (790)
Q Consensus       141 ~~~~l~~~~~~~~~~~--~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  218 (790)
                       -+.+.++++.+....  .......++.....+. -..|.++.+..++  +..          ....|.+.|+.+++...
T Consensus       129 -d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~-~~~~~~~~~~~l~--s~s----------~D~~i~~wd~~~~~~~~  194 (380)
T 3iz6_a          129 -DSACSIFNLSSQADRDGNMPVSRVLTGHKGYAS-SCQYVPDQETRLI--TGS----------GDQTCVLWDVTTGQRIS  194 (380)
T ss_dssp             -SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCC-CCBCCSSSSSCEE--EEC----------TTSCEEEECTTTCCEEE
T ss_pred             -CCcEEEEECCCCccccCCccceeeccCCCcceE-EEEEecCCCCEEE--EEC----------CCCcEEEEEcCCCcEEE
Confidence             124555555432100  0011111222211111 1233333322122  111          12567777887765321


Q ss_pred             CcCCccccccccceeehhhcccCCCCCCCEEEEEEEcc-CCcEEEEEeccCcceEEEEEECCC-CceeEEEEEeCCCccc
Q psy463          219 DKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWAN-ESVVAAWVNRVQNRARITRCSINE-GTCDVVFSRDLDRGWF  296 (790)
Q Consensus       219 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~-g~~~~l~~~~~~~~~~  296 (790)
                      .     +.            .+........+..+.|+| |+.+++....+.   .|.++|+.. +.+...+..  ..   
T Consensus       195 ~-----~~------------~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~---~v~~wd~~~~~~~~~~~~~--h~---  249 (380)
T 3iz6_a          195 I-----FG------------SEFPSGHTADVLSLSINSLNANMFISGSCDT---TVRLWDLRITSRAVRTYHG--HE---  249 (380)
T ss_dssp             E-----EC------------CCSSSSCCSCEEEEEECSSSCCEEEEEETTS---CEEEEETTTTCCCCEEECC--CS---
T ss_pred             E-----ee------------cccCCCCccCeEEEEeecCCCCEEEEEECCC---eEEEEECCCCCcceEEECC--cC---
Confidence            1     00            000013345577888977 777655554433   288888863 344333321  11   


Q ss_pred             ccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCC------e-EEeEEEeeecCC
Q psy463          297 EPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR------F-TVTEILAWDEKE  369 (790)
Q Consensus       297 ~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~------~-~~~~~~~~s~dg  369 (790)
                      .......|+|||+.|+ +.+    .+|        .|.++|+.+++.     ...+....      . .+. .++|+|+|
T Consensus       250 ~~v~~v~~~p~~~~l~-s~s----~D~--------~i~lwd~~~~~~-----~~~~~~~~~~~~~~~~~v~-~~~~s~~g  310 (380)
T 3iz6_a          250 GDINSVKFFPDGQRFG-TGS----DDG--------TCRLFDMRTGHQ-----LQVYNREPDRNDNELPIVT-SVAFSISG  310 (380)
T ss_dssp             SCCCEEEECTTSSEEE-EEC----SSS--------CEEEEETTTTEE-----EEEECCCCSSSCCSSCSCS-EEEECSSS
T ss_pred             CCeEEEEEecCCCeEE-EEc----CCC--------eEEEEECCCCcE-----EEEecccccccccccCceE-EEEECCCC
Confidence            1245799999999887 666    456        588899887651     22221110      0 123 37899999


Q ss_pred             CEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          370 NNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       370 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      +.|+..+.+     ..|+..++..  ++. ..+.. +  ..+....+..+.|||||++++....   -..|.++++.+
T Consensus       311 ~~l~~g~~d-----g~i~vwd~~~--~~~~~~~~~-~--~~~h~~~v~~l~~s~dg~~l~sgs~---D~~i~iW~~~~  375 (380)
T 3iz6_a          311 RLLFAGYSN-----GDCYVWDTLL--AEMVLNLGT-L--QNSHEGRISCLGLSSDGSALCTGSW---DKNLKIWAFSG  375 (380)
T ss_dssp             SEEEEECTT-----SCEEEEETTT--CCEEEEECC-S--CSSCCCCCCEEEECSSSSEEEEECT---TSCEEEEECCS
T ss_pred             CEEEEEECC-----CCEEEEECCC--CceEEEEec-c--cCCCCCceEEEEECCCCCEEEEeeC---CCCEEEEecCC
Confidence            977665554     3455556544  221 11111 0  0113456778999999998765432   23466776654

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=98.79  E-value=5.2e-06  Score=86.36  Aligned_cols=287  Identities=11%  Similarity=0.081  Sum_probs=146.0

Q ss_pred             ceeEe-----CC-CCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeE
Q psy463           11 SALWF-----SP-SGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRAR   84 (790)
Q Consensus        11 ~~~~w-----SP-DG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~   84 (790)
                      .++.|     +| ||+.||-.+ .++...+|.+...... .........+..+...+..+.|++++..+.-..   ..-.
T Consensus        25 ~~~~~~~s~~~~~d~~~l~sgs-~D~~v~iWd~~~~~~~-~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s---~D~~   99 (343)
T 2xzm_R           25 TSIVAGFSQKENEDSPVLISGS-RDKTVMIWKLYEEEQN-GYFGIPHKALTGHNHFVSDLALSQENCFAISSS---WDKT   99 (343)
T ss_dssp             EEEEECCCSSTTCCCCEEEEEE-TTSCEEEEEECSSCCS-SBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE---TTSE
T ss_pred             hheeeEEEeecCCCCCEEEEEc-CCCEEEEEECCcCCcc-cccccccchhccCCCceEEEEECCCCCEEEEEc---CCCc
Confidence            56677     77 999888654 5778888877542110 000001111222333344556766655443222   2235


Q ss_pred             EEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceec
Q psy463           85 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  164 (790)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~l  164 (790)
                      +.+++..++++...+......     .....|+|||+.|+-.+ .++            .|.++++.+..      ...+
T Consensus       100 v~lwd~~~~~~~~~~~~h~~~-----v~~v~~sp~~~~l~s~~-~d~------------~i~~wd~~~~~------~~~~  155 (343)
T 2xzm_R          100 LRLWDLRTGTTYKRFVGHQSE-----VYSVAFSPDNRQILSAG-AER------------EIKLWNILGEC------KFSS  155 (343)
T ss_dssp             EEEEETTSSCEEEEEECCCSC-----EEEEEECSSTTEEEEEE-TTS------------CEEEEESSSCE------EEEC
T ss_pred             EEEEECCCCcEEEEEcCCCCc-----EEEEEECCCCCEEEEEc-CCC------------EEEEEeccCCc------eeee
Confidence            677888777765544432211     12358999999876433 222            57777765331      1111


Q ss_pred             c--ccceEEEEEEeeeccCCcc-------EEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeeh
Q psy463          165 T--RGRFTVTEILAWDERENNP-------LLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI  235 (790)
Q Consensus       165 t--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~  235 (790)
                      .  .+......-..|.+.....       -++++..          ....|.+.|.....      ...+.         
T Consensus       156 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~~~------~~~~~---------  210 (343)
T 2xzm_R          156 AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG----------WDGRLKVWNTNFQI------RYTFK---------  210 (343)
T ss_dssp             CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE----------TTSEEEEEETTTEE------EEEEE---------
T ss_pred             ecccCCCceeeeeeeccccccccccCCCCCEEEEEc----------CCCEEEEEcCCCce------eEEEc---------
Confidence            0  0111112223444433110       1222211          12456666633211      11222         


Q ss_pred             hhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECC-CCceeEEEEEeCCCcccccCCceeEccCCCEEEEE
Q psy463          236 LAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSIN-EGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLI  314 (790)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~-~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~  314 (790)
                              .....+..++|+|||++++....+.   .|.++|+. .+..........      .....+|+||++.++ .
T Consensus       211 --------~h~~~v~~~~~s~~g~~l~sgs~dg---~v~iwd~~~~~~~~~~~~~~~------~v~~v~~sp~~~~la-~  272 (343)
T 2xzm_R          211 --------AHESNVNHLSISPNGKYIATGGKDK---KLLIWDILNLTYPQREFDAGS------TINQIAFNPKLQWVA-V  272 (343)
T ss_dssp             --------CCSSCEEEEEECTTSSEEEEEETTC---EEEEEESSCCSSCSEEEECSS------CEEEEEECSSSCEEE-E
T ss_pred             --------CccccceEEEECCCCCEEEEEcCCC---eEEEEECCCCcccceeecCCC------cEEEEEECCCCCEEE-E
Confidence                    3455678999999999666554432   38888884 343333332211      134789999998665 3


Q ss_pred             EccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc-----------CCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          315 LSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT-----------RGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       315 ~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-----------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      ..     ++        .+.++++.+++...   ...+.           .....+.. ++|+|+|+.|+..+.++.   
T Consensus       273 ~~-----d~--------~v~iw~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~-~~~sp~g~~l~sg~~Dg~---  332 (343)
T 2xzm_R          273 GT-----DQ--------GVKIFNLMTQSKAP---VCTIEAEPITKAEGQKGKNPQCTS-LAWNALGKKLFAGFTDGV---  332 (343)
T ss_dssp             EE-----SS--------CEEEEESSSCCSCS---EEECCCCSGGGBTTBCCSCCCEEE-EEECSSSCCEEEEETTSE---
T ss_pred             EC-----CC--------CEEEEEeCCCCCCc---eEEeecCcchhhhhhcCCCCceEE-EEECCCCCeEEEecCCce---
Confidence            32     33        37788887654100   00111           11122333 899999998877666643   


Q ss_pred             EEEEEE
Q psy463          384 QHMYRI  389 (790)
Q Consensus       384 ~~l~~~  389 (790)
                      .++|.+
T Consensus       333 v~~w~~  338 (343)
T 2xzm_R          333 IRTFSF  338 (343)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            556654

>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*

Probab=98.79  E-value=4.7e-08  Score=97.88  Aligned_cols=119  Identities=16%  Similarity=0.184  Sum_probs=79.5

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      +...++.|...   +....+.||++||..++.  ...|...+. ..++++||.|+.+|++|++.....           .
T Consensus        50 L~~~i~~p~~~---~~~~~~pVVLvHG~~~~~--~~~w~~~l~-~~L~~~Gy~V~a~DlpG~G~~~~~-----------~  112 (316)
T 3icv_A           50 LDAGLTCQGAS---PSSVSKPILLVPGTGTTG--PQSFDSNWI-PLSAQLGYTPCWISPPPFMLNDTQ-----------V  112 (316)
T ss_dssp             HHHTEEETTBB---TTBCSSEEEEECCTTCCH--HHHHTTTHH-HHHHHTTCEEEEECCTTTTCSCHH-----------H
T ss_pred             HhhhEeCCCCC---CCCCCCeEEEECCCCCCc--HHHHHHHHH-HHHHHCCCeEEEecCCCCCCCcHH-----------H
Confidence            33445556332   333456788999987652  123331233 345557999999999987543211           2


Q ss_pred             chhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC--CCceEEEEEeCCCCC
Q psy463          563 EIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP--SNVFKCGISVAPVTD  621 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p--~~~~~~~v~~~~~~~  621 (790)
                      ..+++.+.++.+.+..+   .+++.|+||||||.++.+++.++|  .++++.+|.++|...
T Consensus       113 ~~~~la~~I~~l~~~~g---~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~  170 (316)
T 3icv_A          113 NTEYMVNAITTLYAGSG---NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK  170 (316)
T ss_dssp             HHHHHHHHHHHHHHHTT---SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred             HHHHHHHHHHHHHHHhC---CCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence            24667777887776433   479999999999999988887664  358999999888654

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.78  E-value=3.6e-07  Score=98.51  Aligned_cols=163  Identities=11%  Similarity=0.140  Sum_probs=95.9

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcc--cccCCceeEccCCCEEEEEEccccccCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGW--FEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~--~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ..++..++|||||+.++....+..   +.+++.++    .+.... ....  -..+...+|||||+.|+ +++    .+|
T Consensus        85 ~~~V~~vawSPdG~~LAs~s~dg~---V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LA-sgs----~DG  151 (588)
T 2j04_A           85 VCYPRVCKPSPIDDWMAVLSNNGN---VSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIV-VGN----EDG  151 (588)
T ss_dssp             SCCEEEEEECSSSSCEEEEETTSC---EEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEE-EEE----TTS
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCc---EEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEE-EEc----CCC
Confidence            577899999999995555544332   77777543    222211 1111  01144799999999998 665    566


Q ss_pred             CCCcCcccEEEEEEcCCCCcccC--CCcccc----cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKD--KVPVPL----TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT  397 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~--~~~~~l----t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~  397 (790)
                              .|.++++.++.....  .....+    ..+...+.. ++|+|||  ++..+.+     ..++..++.+  ++
T Consensus       152 --------tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s-VawSPdg--Laass~D-----~tVrlWd~~~--~~  213 (588)
T 2j04_A          152 --------ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH-IVWYEDV--LVAALSN-----NSVFSMTVSA--SS  213 (588)
T ss_dssp             --------EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE-EEEETTE--EEEEETT-----CCEEEECCCS--SS
T ss_pred             --------EEEEEECCCCccccccceeeeeeecccccccccEEE-EEEcCCc--EEEEeCC-----CeEEEEECCC--Cc
Confidence                    688889887640000  001223    111223444 8999998  5555554     3455556655  33


Q ss_pred             cc----eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEE
Q psy463          398 PE----CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLY  451 (790)
Q Consensus       398 ~~----~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~  451 (790)
                      ..    .+...      ....+..++|+  |++++..++    ..|.+++..+++...
T Consensus       214 ~~~~~~tL~~~------h~~~V~svaFs--g~~LASa~~----~tIkLWd~~~~~~~~  259 (588)
T 2j04_A          214 HQPVSRMIQNA------SRRKITDLKIV--DYKVVLTCP----GYVHKIDLKNYSISS  259 (588)
T ss_dssp             SCCCEEEEECC------CSSCCCCEEEE--TTEEEEECS----SEEEEEETTTTEEEE
T ss_pred             cccceeeeccc------ccCcEEEEEEE--CCEEEEEeC----CeEEEEECCCCeEEE
Confidence            21    23211      34567778899  577765542    579999998876643

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=98.78  E-value=3.3e-06  Score=86.15  Aligned_cols=238  Identities=10%  Similarity=0.084  Sum_probs=136.2

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+|||+.|+-.+ .+            +.|.++++.++.     ....+......+. -..+.++++  .++...   
T Consensus        19 ~~fsp~~~~l~s~~-~d------------g~v~lWd~~~~~-----~~~~~~~~~~~v~-~~~~~~~~~--~l~s~s---   74 (304)
T 2ynn_A           19 IDFHPTEPWVLTTL-YS------------GRVELWNYETQV-----EVRSIQVTETPVR-AGKFIARKN--WIIVGS---   74 (304)
T ss_dssp             EEECSSSSEEEEEE-TT------------SEEEEEETTTTE-----EEEEEECCSSCEE-EEEEEGGGT--EEEEEE---
T ss_pred             EEECCCCCEEEEEc-CC------------CcEEEEECCCCc-----eeEEeeccCCcEE-EEEEeCCCC--EEEEEC---
Confidence            48899999877433 22            278888887763     2223332222222 335566554  333222   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                              ....|.+.|+.+++.     ...+.                 .....+..+.|+||+++++....+..   |
T Consensus        75 --------~d~~i~vwd~~~~~~-----~~~~~-----------------~h~~~v~~~~~~~~~~~l~sgs~D~~---v  121 (304)
T 2ynn_A           75 --------DDFRIRVFNYNTGEK-----VVDFE-----------------AHPDYIRSIAVHPTKPYVLSGSDDLT---V  121 (304)
T ss_dssp             --------TTSEEEEEETTTCCE-----EEEEE-----------------CCSSCEEEEEECSSSSEEEEEETTSC---E
T ss_pred             --------CCCEEEEEECCCCcE-----EEEEe-----------------CCCCcEEEEEEcCCCCEEEEECCCCe---E
Confidence                    115788888887753     22233                 45567889999999996665544332   8


Q ss_pred             EEEECCCCce-eEEEEEeCCCcccccCCceeEcc-CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463          274 TRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  351 (790)
Q Consensus       274 ~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~sp-Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~  351 (790)
                      .+.|+.++.. ...+.  +...   ......|+| |++.|+ +.+    .+|        .|.++|+..++     ....
T Consensus       122 ~lWd~~~~~~~~~~~~--~h~~---~v~~v~~~p~~~~~l~-sgs----~D~--------~v~iwd~~~~~-----~~~~  178 (304)
T 2ynn_A          122 KLWNWENNWALEQTFE--GHEH---FVMCVAFNPKDPSTFA-SGC----LDR--------TVKVWSLGQST-----PNFT  178 (304)
T ss_dssp             EEEEGGGTTEEEEEEC--CCCS---CEEEEEECTTCTTEEE-EEE----TTS--------EEEEEETTCSS-----CSEE
T ss_pred             EEEECCCCcchhhhhc--ccCC---cEEEEEECCCCCCEEE-EEe----CCC--------eEEEEECCCCC-----ccce
Confidence            8888877633 22222  1111   134789999 566665 665    456        68889987654     1223


Q ss_pred             ccCC-CeEEeEEEeeec--CCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEE
Q psy463          352 LTRG-RFTVTEILAWDE--KENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYV  428 (790)
Q Consensus       352 lt~~-~~~~~~~~~~s~--dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~  428 (790)
                      +..+ ...+. ...|+|  +++.|+-.+.+     ..|...++..  ++  ++..    +.+....+..+.|+|++.+++
T Consensus       179 ~~~~~~~~v~-~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~--~~--~~~~----~~~h~~~v~~~~~~p~~~~l~  244 (304)
T 2ynn_A          179 LTTGQERGVN-YVDYYPLPDKPYMITASDD-----LTIKIWDYQT--KS--CVAT----LEGHMSNVSFAVFHPTLPIII  244 (304)
T ss_dssp             EECCCTTCEE-EEEECCSTTCCEEEEEETT-----SEEEEEETTT--TE--EEEE----EECCSSCEEEEEECSSSSEEE
T ss_pred             eccCCcCcEE-EEEEEEcCCCCEEEEEcCC-----CeEEEEeCCC--Cc--ccee----eCCCCCCEEEEEECCCCCEEE
Confidence            3322 22232 255655  66766665555     3455556654  22  2221    112456778899999999775


Q ss_pred             EEeecCCCCeEEEEecCCCe
Q psy463          429 LSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       429 ~~~~~~~~~~i~~~~~~~~~  448 (790)
                      .....   ..|.++|+.+.+
T Consensus       245 s~s~D---g~i~iWd~~~~~  261 (304)
T 2ynn_A          245 SGSED---GTLKIWNSSTYK  261 (304)
T ss_dssp             EEETT---SCEEEEETTTCC
T ss_pred             EEcCC---CeEEEEECCCCc
Confidence            44322   347788876643

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=98.78  E-value=2.2e-06  Score=92.51  Aligned_cols=299  Identities=9%  Similarity=0.058  Sum_probs=153.9

Q ss_pred             CceeEeCCC-CCceEEEEecCCceeEEEecccCCCCCCCcCCCccccC--CCCccccccCCC-cceeEeeeecccceeEE
Q psy463           10 SSALWFSPS-GNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINL--REPVLSRVNWAN-ESVVAAWVNRVQNRARI   85 (790)
Q Consensus        10 ~~~~~wSPD-G~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~w~~-~~~~~~~~~r~~~~~~~   85 (790)
                      ..+++|||+ ++.|| +...+|.+.+|.+......        ...++  +...+..+.|++ ++..+.-....   -.+
T Consensus       122 V~~l~~~P~~~~~la-sGs~dg~i~lWd~~~~~~~--------~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D---~~v  189 (435)
T 4e54_B          122 ATSLAWHPTHPSTVA-VGSKGGDIMLWNFGIKDKP--------TFIKGIGAGGSITGLKFNPLNTNQFYASSME---GTT  189 (435)
T ss_dssp             EEEEEECSSCTTCEE-EEETTSCEEEECSSCCSCC--------EEECCCSSSCCCCEEEECSSCTTEEEEECSS---SCE
T ss_pred             EEEEEEeCCCCCEEE-EEeCCCEEEEEECCCCCce--------eEEEccCCCCCEEEEEEeCCCCCEEEEEeCC---CEE
Confidence            467899995 55555 4556777777755432211        11121  222344566765 34433322222   235


Q ss_pred             EEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecc
Q psy463           86 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  165 (790)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt  165 (790)
                      .+++..++.++.+........++   ....|+|||+.|+..+ .            .+.|.++++.+..      ...+.
T Consensus       190 ~iwd~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~-~------------dg~i~~wd~~~~~------~~~~~  247 (435)
T 4e54_B          190 RLQDFKGNILRVFASSDTINIWF---CSLDVSASSRMVVTGD-N------------VGNVILLNMDGKE------LWNLR  247 (435)
T ss_dssp             EEEETTSCEEEEEECCSSCSCCC---CCEEEETTTTEEEEEC-S------------SSBEEEEESSSCB------CCCSB
T ss_pred             EEeeccCCceeEEeccCCCCccE---EEEEECCCCCEEEEEe-C------------CCcEeeeccCcce------eEEEe
Confidence            66777666555544433333333   3457899999877533 1            2278888886542      22333


Q ss_pred             ccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCC
Q psy463          166 RGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNV  245 (790)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~  245 (790)
                      .....+.. +.|++.+..  ++++..  .        ...|.+.|+.+++....  .....                 ..
T Consensus       248 ~h~~~v~~-v~~~p~~~~--~~~s~s--~--------d~~v~iwd~~~~~~~~~--~~~~~-----------------~h  295 (435)
T 4e54_B          248 MHKKKVTH-VALNPCCDW--FLATAS--V--------DQTVKIWDLRQVRGKAS--FLYSL-----------------PH  295 (435)
T ss_dssp             CCSSCEEE-EEECTTCSS--EEEEEE--T--------TSBCCEEETTTCCSSSC--CSBCC-----------------BC
T ss_pred             cccceEEe-eeecCCCce--EEEEec--C--------cceeeEEecccccccce--EEEee-----------------ec
Confidence            33333433 466776653  222221  1        13566667766542111  00111                 23


Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeC--CCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDL--DRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~--~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ...+..+.|||||++++....+.   .|.++++.++.+........  ...+.. .-...|+|++..++...+    .++
T Consensus       296 ~~~v~~~~~spdg~~l~s~~~D~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~d~  367 (435)
T 4e54_B          296 RHPVNAACFSPDGARLLTTDQKS---EIRVYSASQWDCPLGLIPHPHRHFQHLT-PIKAAWHPRYNLIVVGRY----PDP  367 (435)
T ss_dssp             SSCEEECCBCTTSSEEEEEESSS---CEEEEESSSSSSEEEECCCCCCCCSSSC-CCBCEECSSSSCEEEECC----CCT
T ss_pred             cccccceeECCCCCeeEEEcCCC---EEEEEECCCCccceEEecccccccccce-eEEEEEcCCCCEEEEEEc----CCC
Confidence            45678899999999665554432   28889998876643332111  011111 225679999987774332    111


Q ss_pred             CCC---cCcccEEEEEEcCCCCcccCCCcccccC-CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          324 STP---VDSWDHLTFIDLDDQAGIKDKVPVPLTR-GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       324 ~~~---~~~~~~l~~~d~~~~~~~~~~~~~~lt~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ...   ......|.++|..+++     ....+.. +...+....+|+|||+.|+- +.+     ..|.+-++..
T Consensus       368 ~~~~~~~~~~~~i~iwd~~~g~-----~~~~l~~~~~~~v~s~~~fspdg~~las-g~d-----~~i~iW~~~~  430 (435)
T 4e54_B          368 NFKSCTPYELRTIDVFDGNSGK-----MMCQLYDPESSGISSLNEFNPMGDTLAS-AMG-----YHILIWSQQE  430 (435)
T ss_dssp             TSCCSSTTCCCCEEEECSSSCC-----EEEEECCSSCCCCCCEEEECTTSSCEEE-ECS-----SEEEECCCC-
T ss_pred             CeEEEEecCCCEEEEEECCCCc-----EEEEEeCCCCCcEEEEEEECCCCCEEEE-EcC-----CcEEEEECCc
Confidence            000   0002358888988776     1333332 22233443479999996653 333     2354445544

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=98.77  E-value=2.4e-06  Score=91.49  Aligned_cols=237  Identities=14%  Similarity=0.184  Sum_probs=140.6

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+|+|+.|+-.+ .++            .|.++++.+++     ....+..+...+.. ..|+++++  ++....   
T Consensus       114 ~~~~p~~~~l~s~s-~Dg------------~i~vwd~~~~~-----~~~~l~~h~~~V~~-v~~~~~~~--~l~sgs---  169 (410)
T 1vyh_C          114 VIFHPVFSVMVSAS-EDA------------TIKVWDYETGD-----FERTLKGHTDSVQD-ISFDHSGK--LLASCS---  169 (410)
T ss_dssp             EEECSSSSEEEEEE-SSS------------CEEEEETTTCC-----CCEEECCCSSCEEE-EEECTTSS--EEEEEE---
T ss_pred             EEEcCCCCEEEEEe-CCC------------eEEEEECCCCc-----EEEEEeccCCcEEE-EEEcCCCC--EEEEEe---
Confidence            47999998766433 222            68888988774     23334433333333 45666554  333222   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                      .        ...|.+.|+.+++.     ...+.                 .....+..+.|+|||+.++....+.   .|
T Consensus       170 ~--------D~~i~iwd~~~~~~-----~~~~~-----------------~h~~~V~~v~~~p~~~~l~s~s~D~---~i  216 (410)
T 1vyh_C          170 A--------DMTIKLWDFQGFEC-----IRTMH-----------------GHDHNVSSVSIMPNGDHIVSASRDK---TI  216 (410)
T ss_dssp             T--------TSCCCEEETTSSCE-----EECCC-----------------CCSSCEEEEEECSSSSEEEEEETTS---EE
T ss_pred             C--------CCeEEEEeCCCCce-----eEEEc-----------------CCCCCEEEEEEeCCCCEEEEEeCCC---eE
Confidence            1        13566667766542     12222                 4456788999999999665554433   38


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      .++|+.++.+...+..  ...+   .....|+|||+.|+ +.+    .+|        .|.++|+.+++     ....+.
T Consensus       217 ~~wd~~~~~~~~~~~~--h~~~---v~~~~~~~~g~~l~-s~s----~D~--------~v~vwd~~~~~-----~~~~~~  273 (410)
T 1vyh_C          217 KMWEVQTGYCVKTFTG--HREW---VRMVRPNQDGTLIA-SCS----NDQ--------TVRVWVVATKE-----CKAELR  273 (410)
T ss_dssp             EEEETTTCCEEEEEEC--CSSC---EEEEEECTTSSEEE-EEE----TTS--------CEEEEETTTCC-----EEEEEC
T ss_pred             EEEECCCCcEEEEEeC--CCcc---EEEEEECCCCCEEE-EEc----CCC--------eEEEEECCCCc-----eeeEec
Confidence            9999999877544432  2223   33678999999777 555    455        58888987765     133344


Q ss_pred             CCCeEEeEEEeeecC--------------------CCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcc
Q psy463          354 RGRFTVTEILAWDEK--------------------ENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKC  413 (790)
Q Consensus       354 ~~~~~~~~~~~~s~d--------------------g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~  413 (790)
                      .+...+.. +.|+|+                    |..|+..+.+     ..|...++..  ++  ++..    +.+...
T Consensus       274 ~h~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D-----~~i~iwd~~~--~~--~~~~----~~~h~~  339 (410)
T 1vyh_C          274 EHRHVVEC-ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD-----KTIKMWDVST--GM--CLMT----LVGHDN  339 (410)
T ss_dssp             CCSSCEEE-EEECCSCGGGGGGGCCSCC-------CCEEEEEETT-----SEEEEEETTT--TE--EEEE----EECCSS
T ss_pred             CCCceEEE-EEEcCcccccchhhhccccccccCCCCCEEEEEeCC-----CeEEEEECCC--Cc--eEEE----EECCCC
Confidence            44444444 788886                    4445444444     3566667655  32  2211    111445


Q ss_pred             cEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          414 SYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       414 ~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      .+..+.|+|+|++++....   -..|.++|+.++
T Consensus       340 ~v~~v~~~~~g~~l~s~s~---D~~i~vwd~~~~  370 (410)
T 1vyh_C          340 WVRGVLFHSGGKFILSCAD---DKTLRVWDYKNK  370 (410)
T ss_dssp             CEEEEEECSSSSCEEEEET---TTEEEEECCTTS
T ss_pred             cEEEEEEcCCCCEEEEEeC---CCeEEEEECCCC
Confidence            6788999999998865432   245777777543

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=98.76  E-value=2.6e-06  Score=87.27  Aligned_cols=240  Identities=13%  Similarity=0.157  Sum_probs=136.1

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+|||+.|+..+ .+            +.|.++++.+++     ....+......+. -+.|+++++  +++...   
T Consensus        29 ~~~s~~~~~l~s~~-~d------------g~i~iw~~~~~~-----~~~~~~~h~~~v~-~~~~~~~~~--~l~s~~---   84 (312)
T 4ery_A           29 VKFSPNGEWLASSS-AD------------KLIKIWGAYDGK-----FEKTISGHKLGIS-DVAWSSDSN--LLVSAS---   84 (312)
T ss_dssp             EEECTTSSEEEEEE-TT------------SCEEEEETTTCC-----EEEEECCCSSCEE-EEEECTTSS--EEEEEE---
T ss_pred             EEECCCCCEEEEee-CC------------CeEEEEeCCCcc-----cchhhccCCCceE-EEEEcCCCC--EEEEEC---
Confidence            47899999877543 22            257777876663     2333433333333 346777654  333222   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                              ....|.+.|+.+++.     ...+.                 .....+..+.|+|||++++....+.   .|
T Consensus        85 --------~d~~i~vwd~~~~~~-----~~~~~-----------------~~~~~v~~~~~~~~~~~l~s~~~d~---~i  131 (312)
T 4ery_A           85 --------DDKTLKIWDVSSGKC-----LKTLK-----------------GHSNYVFCCNFNPQSNLIVSGSFDE---SV  131 (312)
T ss_dssp             --------TTSEEEEEETTTCCE-----EEEEE-----------------CCSSCEEEEEECSSSSEEEEEETTS---CE
T ss_pred             --------CCCEEEEEECCCCcE-----EEEEc-----------------CCCCCEEEEEEcCCCCEEEEEeCCC---cE
Confidence                    115788888887652     12222                 4456678899999999666554433   28


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      .++|+.++++.......  .   .......|+|||+.|+ +.+    .+|        .|.++|+.+++     ....+.
T Consensus       132 ~iwd~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~l~-~~~----~d~--------~i~~wd~~~~~-----~~~~~~  188 (312)
T 4ery_A          132 RIWDVKTGKCLKTLPAH--S---DPVSAVHFNRDGSLIV-SSS----YDG--------LCRIWDTASGQ-----CLKTLI  188 (312)
T ss_dssp             EEEETTTCCEEEEECCC--S---SCEEEEEECTTSSEEE-EEE----TTS--------CEEEEETTTCC-----EEEEEC
T ss_pred             EEEECCCCEEEEEecCC--C---CcEEEEEEcCCCCEEE-EEe----CCC--------cEEEEECCCCc-----eeeEEe
Confidence            99999888765443221  1   1234689999999776 555    455        58899988765     123332


Q ss_pred             CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc-eeeecccccCCCcccEEEEEEe-cCCcEEEEEe
Q psy463          354 RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE-CITCDLLTSANQKCSYSGATFS-TNVSYYVLSC  431 (790)
Q Consensus       354 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~~~s-~dg~~~~~~~  431 (790)
                      .........+.|+|+++.|+..+.+     ..|...++..  ++.. .+..     +..........++ +++++++.. 
T Consensus       189 ~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~sg-  255 (312)
T 4ery_A          189 DDDNPPVSFVKFSPNGKYILAATLD-----NTLKLWDYSK--GKCLKTYTG-----HKNEKYCIFANFSVTGGKWIVSG-  255 (312)
T ss_dssp             CSSCCCEEEEEECTTSSEEEEEETT-----TEEEEEETTT--TEEEEEECS-----SCCSSSCCCEEEECSSSCEEEEC-
T ss_pred             ccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCC--CcEEEEEEe-----cCCceEEEEEEEEeCCCcEEEEE-
Confidence            2222222337899999988777665     3555666654  3211 1111     0011111123444 556665432 


Q ss_pred             ecCCCCeEEEEecCCCe
Q psy463          432 IGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       432 ~~~~~~~i~~~~~~~~~  448 (790)
                        ..-..|+++++.+++
T Consensus       256 --~~dg~i~vwd~~~~~  270 (312)
T 4ery_A          256 --SEDNLVYIWNLQTKE  270 (312)
T ss_dssp             --CTTSCEEEEETTTCC
T ss_pred             --CCCCEEEEEECCCch
Confidence              223468888876643

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=98.76  E-value=1.1e-06  Score=92.46  Aligned_cols=243  Identities=11%  Similarity=0.041  Sum_probs=136.5

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...|+|||+.|+....             -+.|.++++++++.   +....+......+.. +.|+++++  .++.... 
T Consensus        13 ~~~~s~~~~~l~~~~~-------------d~~v~i~~~~~~~~---~~~~~~~~h~~~v~~-~~~~~~~~--~l~~~~~-   72 (372)
T 1k8k_C           13 CHAWNKDRTQIAICPN-------------NHEVHIYEKSGNKW---VQVHELKEHNGQVTG-VDWAPDSN--RIVTCGT-   72 (372)
T ss_dssp             EEEECTTSSEEEEECS-------------SSEEEEEEEETTEE---EEEEEEECCSSCEEE-EEEETTTT--EEEEEET-
T ss_pred             EEEECCCCCEEEEEeC-------------CCEEEEEeCCCCcE---EeeeeecCCCCcccE-EEEeCCCC--EEEEEcC-
Confidence            3588999998876432             22788888876620   023333333333333 46666554  3333221 


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                                ...|.++++.+++....   ..+.                 .....+..+.|+|||++++....+..   
T Consensus        73 ----------dg~i~vwd~~~~~~~~~---~~~~-----------------~~~~~v~~~~~~~~~~~l~~~~~d~~---  119 (372)
T 1k8k_C           73 ----------DRNAYVWTLKGRTWKPT---LVIL-----------------RINRAARCVRWAPNEKKFAVGSGSRV---  119 (372)
T ss_dssp             ----------TSCEEEEEEETTEEEEE---EECC-----------------CCSSCEEEEEECTTSSEEEEEETTSS---
T ss_pred             ----------CCeEEEEECCCCeeeee---EEee-----------------cCCCceeEEEECCCCCEEEEEeCCCE---
Confidence                      14677777766542111   0111                 34556789999999996665544322   


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcC-------------
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLD-------------  339 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~-------------  339 (790)
                      |.++++.++....+..... ...........|+|||+.|+ +.+    .+|        .|.++|+.             
T Consensus       120 v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~-~~~----~dg--------~i~~~d~~~~~~~~~~~~~~~  185 (372)
T 1k8k_C          120 ISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVLLA-AGS----CDF--------KCRIFSAYIKEVEERPAPTPW  185 (372)
T ss_dssp             EEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSEEE-EEE----TTS--------CEEEEECCCTTTSCCCCCBTT
T ss_pred             EEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCCCEEE-EEc----CCC--------CEEEEEccccccccccccccc
Confidence            6666666655322221110 11111244789999999877 454    455        57788853             


Q ss_pred             -----CCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcc
Q psy463          340 -----DQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKC  413 (790)
Q Consensus       340 -----~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~  413 (790)
                           .++     ....+......+.. +.|+|+++.|+..+.+     ..|...++..  ++. ..+..       ...
T Consensus       186 ~~~~~~~~-----~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d-----~~i~i~d~~~--~~~~~~~~~-------~~~  245 (372)
T 1k8k_C          186 GSKMPFGE-----LMFESSSSCGWVHG-VCFSANGSRVAWVSHD-----STVCLADADK--KMAVATLAS-------ETL  245 (372)
T ss_dssp             BSCCCTTC-----EEEECCCCSSCEEE-EEECSSSSEEEEEETT-----TEEEEEEGGG--TTEEEEEEC-------SSC
T ss_pred             ccccchhh-----heEecCCCCCeEEE-EEECCCCCEEEEEeCC-----CEEEEEECCC--CceeEEEcc-------CCC
Confidence                 222     12334333334444 8899999988777765     3566667654  332 22221       445


Q ss_pred             cEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          414 SYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       414 ~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .+..+.|+|++++++..  .  -..+.++++.+
T Consensus       246 ~v~~~~~~~~~~~l~~~--~--d~~i~i~~~~~  274 (372)
T 1k8k_C          246 PLLAVTFITESSLVAAG--H--DCFPVLFTYDS  274 (372)
T ss_dssp             CEEEEEEEETTEEEEEE--T--TSSCEEEEEET
T ss_pred             CeEEEEEecCCCEEEEE--e--CCeEEEEEccC
Confidence            67889999999977654  2  23455666554

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=98.75  E-value=2.4e-06  Score=91.74  Aligned_cols=267  Identities=10%  Similarity=0.101  Sum_probs=152.9

Q ss_pred             EEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCccee
Q psy463           84 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  163 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~  163 (790)
                      .+.+|+..+|++..++.......++   ...+|+|||+.|+..+. +            +.|.++++.+++     ....
T Consensus       126 tV~lWd~~tg~~~~~~~~~~~~~~V---~sv~fspdg~~lasgs~-D------------g~v~iWd~~~~~-----~~~~  184 (420)
T 4gga_A          126 SVYLWSASSGDILQLLQMEQPGEYI---SSVAWIKEGNYLAVGTS-S------------AEVQLWDVQQQK-----RLRN  184 (420)
T ss_dssp             EEEEEETTTCCEEEEEECCSTTCCE---EEEEECTTSSEEEEEET-T------------SCEEEEETTTTE-----EEEE
T ss_pred             EEEEEECCCCCEEEEEEecCCCCcE---EEEEECCCCCEEEEEEC-C------------CeEEEEEcCCCc-----EEEE
Confidence            5788999999888877655444343   34689999998775332 2            268888887763     2233


Q ss_pred             ccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCC
Q psy463          164 LTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKEN  243 (790)
Q Consensus       164 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~  243 (790)
                      +......+.. +.+++.    ++....           ....++..+.......    ...+.                 
T Consensus       185 ~~~h~~~v~~-~s~~~~----~l~sgs-----------~d~~i~~~d~~~~~~~----~~~~~-----------------  227 (420)
T 4gga_A          185 MTSHSARVGS-LSWNSY----ILSSGS-----------RSGHIHHHDVRVAEHH----VATLS-----------------  227 (420)
T ss_dssp             ECCCSSCEEE-EEEETT----EEEEEE-----------TTSEEEEEETTSSSCE----EEEEE-----------------
T ss_pred             EeCCCCceEE-EeeCCC----EEEEEe-----------CCCceeEeeeccccee----eEEec-----------------
Confidence            3333333322 233321    222211           1146666665543210    11122                 


Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCcee--EEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCD--VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~--~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                      ..........|+|+|+.++....+.   .+.+.+..+++..  .+.......   .......|+|++..++.+.+-  ..
T Consensus       228 ~h~~~~~~~~~~~~g~~l~s~~~D~---~v~i~~~~~~~~~~~~~~~~~~~~---~~V~~~~~~p~~~~~la~~~g--s~  299 (420)
T 4gga_A          228 GHSQEVCGLRWAPDGRHLASGGNDN---LVNVWPSAPGEGGWVPLQTFTQHQ---GAVKAVAWCPWQSNVLATGGG--TS  299 (420)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTS---CEEEEESSCCSSCSCCSEEECCCS---SCEEEEEECTTCTTEEEEEEC--TT
T ss_pred             ccccceeeeeecCCCCeeeeeeccc---cceEEeeccccccceeeeeecccC---CceeeeeeCCCcccEEEEEee--cC
Confidence            3455677899999999655554332   2778888776532  111111111   113468899998887755430  12


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                      ++        .|.++|+.+++     ....+..+. .+.. ..|+++++.++..+....   ..|++.++.+  ++  ++
T Consensus       300 D~--------~I~iwd~~t~~-----~~~~~~~~~-~v~~-~~~~~~~~~lv~~sg~~d---~~I~iwd~~~--~~--~v  357 (420)
T 4gga_A          300 DR--------HIRIWNVCSGA-----CLSAVDAHS-QVCS-ILWSPHYKELISGHGFAQ---NQLVIWKYPT--MA--KV  357 (420)
T ss_dssp             TC--------EEEEEETTTTE-----EEEEEECSS-CEEE-EEEETTTTEEEEEECTTT---CCEEEEETTT--CC--EE
T ss_pred             CC--------EEEEEeCCccc-----cceeecccc-ceee-eeecCCCCeEEEEEecCC---CEEEEEECCC--Cc--EE
Confidence            34        68899998876     123333332 3343 779999998887764422   4566667655  33  22


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      ..    +.++...+..+.|||||++|+-.. ..  ..|.++++.
T Consensus       358 ~~----l~gH~~~V~~l~~spdg~~l~S~s-~D--~tvriWdv~  394 (420)
T 4gga_A          358 AE----LKGHTSRVLSLTMSPDGATVASAA-AD--ETLRLWRCF  394 (420)
T ss_dssp             EE----ECCCSSCEEEEEECTTSSCEEEEE-TT--TEEEEECCS
T ss_pred             EE----EcCCCCCEEEEEEcCCCCEEEEEe-cC--CeEEEEECC
Confidence            21    122566788999999999876433 22  346676654

>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*

Probab=98.75  E-value=1.7e-08  Score=110.75  Aligned_cols=134  Identities=18%  Similarity=0.253  Sum_probs=87.7

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc-hH-HHHHhcCCeEEEEEcCCCCCCChhhhH-hhhhccC
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-WN-LYLADNKDIVVAYIDGRNSALKGNTLK-YAGYRRL  559 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~-~~~~~~~G~~v~~~d~rG~~~~g~~~~-~~~~~~~  559 (790)
                      +...+|.|.+..  ..+++|+||++|||+........+... +. ..++...|++|+.+|||... .|.... .......
T Consensus        98 l~l~v~~P~~~~--~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~-~gf~~~~~~~~~~~  174 (534)
T 1llf_A           98 LTINVVRPPGTK--AGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVAS-WGFLAGDDIKAEGS  174 (534)
T ss_dssp             CEEEEEECTTCC--TTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHH-HHHCCSHHHHHHTC
T ss_pred             eEEEEEECCCCC--CCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCC-CCCCCcccccccCC
Confidence            455677887643  456789999999998764423323221 12 22344569999999999643 121000 0001122


Q ss_pred             CccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcC-------CCCceEEEEEeCCC
Q psy463          560 GTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALD-------PSNVFKCGISVAPV  619 (790)
Q Consensus       560 ~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~-------p~~~~~~~v~~~~~  619 (790)
                      +...+.|+.++++|+.++..  ..|++||.|+|+|.||.++..++...       ....|+++|+.+|.
T Consensus       175 ~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~  243 (534)
T 1llf_A          175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA  243 (534)
T ss_dssp             TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence            33568999999999987521  26899999999999999887666542       13478999999884

>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*

Probab=98.75  E-value=5.8e-09  Score=114.96  Aligned_cols=131  Identities=21%  Similarity=0.283  Sum_probs=89.0

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCC-CCCCChhhhHhhhhccCCc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGR-NSALKGNTLKYAGYRRLGT  561 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~r-G~~~~g~~~~~~~~~~~~~  561 (790)
                      +...+|.|....  ..+++|+||++|||+........+..   ..+++..|++|+.+||| |..++....   .....+.
T Consensus        99 l~lnv~~P~~~~--~~~~~Pv~v~iHGG~~~~g~~~~~~~---~~la~~~g~vvv~~nYRlg~~gf~~~~---~~~~~~n  170 (542)
T 2h7c_A           99 LYLNIYTPADLT--KKNRLPVMVWIHGGGLMVGAASTYDG---LALAAHENVVVVTIQYRLGIWGFFSTG---DEHSRGN  170 (542)
T ss_dssp             CEEEEEECSCTT--SCCCEEEEEEECCSTTTSCCSTTSCC---HHHHHHHTCEEEEECCCCHHHHHCCCS---STTCCCC
T ss_pred             cEEEEEECCCCC--CCCCCCEEEEECCCcccCCCccccCH---HHHHhcCCEEEEecCCCCccccCCCCC---cccCccc
Confidence            344578887644  45679999999999875432333322   23444479999999999 322211110   0111223


Q ss_pred             cchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCCCC
Q psy463          562 VEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPVTD  621 (790)
Q Consensus       562 ~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~~~  621 (790)
                      ..+.|+..+++|+.++..  ..|+++|.|+|+|.||.++..++... ....|+++|+.+|...
T Consensus       171 ~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~  233 (542)
T 2h7c_A          171 WGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL  233 (542)
T ss_dssp             HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence            457899999999987521  37899999999999999998888752 1358999999998754

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=98.75  E-value=1.3e-06  Score=92.60  Aligned_cols=202  Identities=11%  Similarity=0.071  Sum_probs=112.2

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecc--ccceEEEEEEeeeccCCccEEEEec
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT--RGRFTVTEILAWDERENNPLLILSH  190 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt--~~~~~~~~~~~~~~~~~~~~~~~~~  190 (790)
                      ...|+|||..++++...++            .|.++++.++.     ....+.  .....+. -+.|.+.++. +++...
T Consensus        78 ~~~~~~~~~~~l~s~~~dg------------~i~iwd~~~~~-----~~~~~~~~~h~~~v~-~~~~~~~~~~-~l~s~~  138 (383)
T 3ei3_B           78 SLEWHPTHPTTVAVGSKGG------------DIILWDYDVQN-----KTSFIQGMGPGDAIT-GMKFNQFNTN-QLFVSS  138 (383)
T ss_dssp             EEEECSSCTTEEEEEEBTS------------CEEEEETTSTT-----CEEEECCCSTTCBEE-EEEEETTEEE-EEEEEE
T ss_pred             EEEECCCCCCEEEEEcCCC------------eEEEEeCCCcc-----cceeeecCCcCCcee-EEEeCCCCCC-EEEEEe
Confidence            3588999944444443332            68888887663     122222  2233333 3456663332 233222


Q ss_pred             ccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcc
Q psy463          191 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNR  270 (790)
Q Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~  270 (790)
                                 ....|.+.|+.++..      ..+..              .......+..+.|+|||+.++....+.  
T Consensus       139 -----------~d~~i~iwd~~~~~~------~~~~~--------------~~~~~~~v~~~~~~~~~~~l~~~~~d~--  185 (383)
T 3ei3_B          139 -----------IRGATTLRDFSGSVI------QVFAK--------------TDSWDYWYCCVDVSVSRQMLATGDSTG--  185 (383)
T ss_dssp             -----------TTTEEEEEETTSCEE------EEEEC--------------CCCSSCCEEEEEEETTTTEEEEEETTS--
T ss_pred             -----------CCCEEEEEECCCCce------EEEec--------------cCCCCCCeEEEEECCCCCEEEEECCCC--
Confidence                       115777888876431      12210              002235678999999999666554432  


Q ss_pred             eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463          271 ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  350 (790)
Q Consensus       271 ~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~  350 (790)
                       .|.++|+.+.....+...   ..   ......|+|+|+.++++.+    .+|        .|.++|+..++..  ....
T Consensus       186 -~i~i~d~~~~~~~~~~~h---~~---~v~~~~~~~~~~~~l~s~~----~d~--------~i~iwd~~~~~~~--~~~~  244 (383)
T 3ei3_B          186 -RLLLLGLDGHEIFKEKLH---KA---KVTHAEFNPRCDWLMATSS----VDA--------TVKLWDLRNIKDK--NSYI  244 (383)
T ss_dssp             -EEEEEETTSCEEEEEECS---SS---CEEEEEECSSCTTEEEEEE----TTS--------EEEEEEGGGCCST--TCEE
T ss_pred             -CEEEEECCCCEEEEeccC---CC---cEEEEEECCCCCCEEEEEe----CCC--------EEEEEeCCCCCcc--cceE
Confidence             488889854433333221   11   1447899999995443665    455        6889998763200  0022


Q ss_pred             cccCCCeEEeEEEeeec-CCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          351 PLTRGRFTVTEILAWDE-KENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       351 ~lt~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ........+.. +.|+| |++.|+..+.+     ..|...++..
T Consensus       245 ~~~~~~~~v~~-~~~s~~~~~~l~~~~~d-----~~i~iwd~~~  282 (383)
T 3ei3_B          245 AEMPHEKPVNA-AYFNPTDSTKLLTTDQR-----NEIRVYSSYD  282 (383)
T ss_dssp             EEEECSSCEEE-EEECTTTSCEEEEEESS-----SEEEEEETTB
T ss_pred             EEecCCCceEE-EEEcCCCCCEEEEEcCC-----CcEEEEECCC
Confidence            21123334444 89999 99988777665     4566667654

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=98.74  E-value=1.4e-06  Score=92.98  Aligned_cols=170  Identities=12%  Similarity=0.100  Sum_probs=103.7

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      .....+..+.|+|||+ +++....+.   .|.++|+.++++..........   .......|+|||+.|+ +.+    .+
T Consensus       129 ~h~~~v~~~~~~p~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~-~~~----~d  197 (402)
T 2aq5_A          129 GHTKRVGIVAWHPTAQNVLLSAGCDN---VILVWDVGTGAAVLTLGPDVHP---DTIYSVDWSRDGALIC-TSC----RD  197 (402)
T ss_dssp             CCSSCEEEEEECSSBTTEEEEEETTS---CEEEEETTTTEEEEEECTTTCC---SCEEEEEECTTSSCEE-EEE----TT
T ss_pred             CCCCeEEEEEECcCCCCEEEEEcCCC---EEEEEECCCCCccEEEecCCCC---CceEEEEECCCCCEEE-EEe----cC
Confidence            4556788999999995 666554433   2899999988765444101111   1244789999999887 554    45


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccc-cCCCeE-EeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPL-TRGRFT-VTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC  400 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l-t~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~  400 (790)
                      |        .|.++|+.+++     ....+ ...... +.. +.|+||++.|+......  ....|...++... ..+..
T Consensus       198 ~--------~i~iwd~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~--~d~~i~iwd~~~~-~~~~~  260 (402)
T 2aq5_A          198 K--------RVRVIEPRKGT-----VVAEKDRPHEGTRPVH-AVFVSEGKILTTGFSRM--SERQVALWDTKHL-EEPLS  260 (402)
T ss_dssp             S--------EEEEEETTTTE-----EEEEEECSSCSSSCCE-EEECSTTEEEEEEECTT--CCEEEEEEETTBC-SSCSE
T ss_pred             C--------cEEEEeCCCCc-----eeeeeccCCCCCcceE-EEEcCCCcEEEEeccCC--CCceEEEEcCccc-cCCce
Confidence            6        79999998776     13333 222221 233 78999988555542211  1267888888652 11111


Q ss_pred             eeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463          401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                      +.. +    .....+..+.|+||+++++.+....  ..|.++++.+++
T Consensus       261 ~~~-~----~~~~~v~~~~~s~~~~~l~~~g~~d--g~i~i~d~~~~~  301 (402)
T 2aq5_A          261 LQE-L----DTSSGVLLPFFDPDTNIVYLCGKGD--SSIRYFEITSEA  301 (402)
T ss_dssp             EEE-C----CCCSSCEEEEEETTTTEEEEEETTC--SCEEEEEECSST
T ss_pred             EEe-c----cCCCceeEEEEcCCCCEEEEEEcCC--CeEEEEEecCCC
Confidence            111 0    1334577899999999887664332  357777776543

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=98.73  E-value=3.2e-06  Score=88.05  Aligned_cols=169  Identities=15%  Similarity=0.171  Sum_probs=97.7

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeE-EEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDV-VFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~-l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      .....+..++|+|||++++....+..   |.+.++.++.... +.......   .......|+|||+.|+ +.+    .+
T Consensus       103 ~h~~~v~~v~~sp~~~~l~s~s~D~~---v~iwd~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l~-s~s----~d  171 (345)
T 3fm0_A          103 GHENEVKSVAWAPSGNLLATCSRDKS---VWVWEVDEEDEYECVSVLNSHT---QDVKHVVWHPSQELLA-SAS----YD  171 (345)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSC---EEEEEECTTSCEEEEEEECCCC---SCEEEEEECSSSSCEE-EEE----TT
T ss_pred             CCCCCceEEEEeCCCCEEEEEECCCe---EEEEECCCCCCeEEEEEecCcC---CCeEEEEECCCCCEEE-EEe----CC
Confidence            44566889999999996666554432   7778877654322 22221111   1134689999999877 555    45


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc----
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP----  398 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~----  398 (790)
                      +        .|.+++..+++..   ....+..+...+.. ++|+|||+.|+..+.++.   ..||.....+.....    
T Consensus       172 ~--------~i~~w~~~~~~~~---~~~~~~~h~~~v~~-l~~sp~g~~l~s~s~D~~---v~iW~~~~~~~~~~~~~~~  236 (345)
T 3fm0_A          172 D--------TVKLYREEEDDWV---CCATLEGHESTVWS-LAFDPSGQRLASCSDDRT---VRIWRQYLPGNEQGVACSG  236 (345)
T ss_dssp             S--------CEEEEEEETTEEE---EEEEECCCSSCEEE-EEECTTSSEEEEEETTSC---EEEEEEECTTCTTCCCCC-
T ss_pred             C--------cEEEEEecCCCEE---EEEEecCCCCceEE-EEECCCCCEEEEEeCCCe---EEEeccccCCCCccceeec
Confidence            5        4666676554300   01234444444554 899999998887777655   778876543311111    


Q ss_pred             -----ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          399 -----ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       399 -----~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                           +++.. +.  ......+..+.|++++..++......   .+.+++.
T Consensus       237 ~~~~~~~~~~-~~--~~h~~~v~~v~~~~~~~~l~s~~~d~---~i~vw~~  281 (345)
T 3fm0_A          237 SDPSWKCICT-LS--GFHSRTIYDIAWCQLTGALATACGDD---AIRVFQE  281 (345)
T ss_dssp             --CEEEEEEE-EC--SSCSSCEEEEEECTTTCCEEEEETTS---CEEEEEE
T ss_pred             cCCccceeEE-ec--CCCCCcEEEEEEecCCCEEEEEeCCC---eEEEEEe
Confidence                 11111 00  01234677899999998876654332   2455443

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=98.72  E-value=1.1e-06  Score=91.84  Aligned_cols=252  Identities=8%  Similarity=0.051  Sum_probs=134.2

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecc-ccceEEEEEEeeeccC--CccEEEEe
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT-RGRFTVTEILAWDERE--NNPLLILS  189 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt-~~~~~~~~~~~~~~~~--~~~~~~~~  189 (790)
                      ...|+|||+.++.......+         -+.|.++++.+++     ...... .....+ .-..|.++.  +. +++..
T Consensus        23 ~~~~~p~~~~l~~~~s~~~~---------d~~v~iw~~~~~~-----~~~~~~~~~~~~v-~~~~~~~~~~~~~-~l~~~   86 (357)
T 3i2n_A           23 DCKWVPCSAKFVTMGNFARG---------TGVIQLYEIQHGD-----LKLLREIEKAKPI-KCGTFGATSLQQR-YLATG   86 (357)
T ss_dssp             EEEECTTSSEEEEEEC--CC---------CEEEEEEEECSSS-----EEEEEEEEESSCE-EEEECTTCCTTTC-CEEEE
T ss_pred             EEEEcCCCceEEEecCccCC---------CcEEEEEeCCCCc-----ccceeeecccCcE-EEEEEcCCCCCCc-eEEEe
Confidence            35889999888766543100         1278888887763     111111 122223 234566653  22 22222


Q ss_pred             cccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEE------EEccCCcEEEE
Q psy463          190 HNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRV------NWANESVVAAW  263 (790)
Q Consensus       190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~------~wspDg~~~~~  263 (790)
                      .           ....|.++++.+++..    ...+.                 .....+..+      +|+|||+.++.
T Consensus        87 ~-----------~dg~i~iwd~~~~~~~----~~~~~-----------------~~~~~v~~~~~~~~~~~s~~~~~l~~  134 (357)
T 3i2n_A           87 D-----------FGGNLHIWNLEAPEMP----VYSVK-----------------GHKEIINAIDGIGGLGIGEGAPEIVT  134 (357)
T ss_dssp             E-----------TTSCEEEECTTSCSSC----SEEEC-----------------CCSSCEEEEEEESGGGCC-CCCEEEE
T ss_pred             c-----------CCCeEEEEeCCCCCcc----EEEEE-----------------ecccceEEEeeccccccCCCccEEEE
Confidence            1           1257888888776410    12222                 334455666      45789996665


Q ss_pred             EeccCcceEEEEEECCCCc-eeEEEEEeCCCcccccCCce----eEccCCCEEEEEEccccccCCCCCcCcccEEEEEEc
Q psy463          264 VNRVQNRARITRCSINEGT-CDVVFSRDLDRGWFEPFDHL----RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL  338 (790)
Q Consensus       264 ~~r~~~~~~i~~~~~~~g~-~~~l~~~~~~~~~~~~~~~~----~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~  338 (790)
                      ...+.   .|.++|+.+++ ......... ..-.......    .|+|||+.|+ +.+    .+|        .|.++|+
T Consensus       135 ~~~d~---~i~vwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~l~-~~~----~d~--------~i~i~d~  197 (357)
T 3i2n_A          135 GSRDG---TVKVWDPRQKDDPVANMEPVQ-GENKRDCWTVAFGNAYNQEERVVC-AGY----DNG--------DIKLFDL  197 (357)
T ss_dssp             EETTS---CEEEECTTSCSSCSEEECCCT-TSCCCCEEEEEEECCCC-CCCEEE-EEE----TTS--------EEEEEET
T ss_pred             EeCCC---eEEEEeCCCCCCcceeccccC-CCCCCceEEEEEEeccCCCCCEEE-EEc----cCC--------eEEEEEC
Confidence            54433   28889998876 333322111 0000001123    3899999887 454    345        7999999


Q ss_pred             CCCCcccCCCcccccCCCeEEeEEEeeec---CCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccE
Q psy463          339 DDQAGIKDKVPVPLTRGRFTVTEILAWDE---KENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSY  415 (790)
Q Consensus       339 ~~~~~~~~~~~~~lt~~~~~~~~~~~~s~---dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~  415 (790)
                      .+++      ..........+.. +.|+|   +++.++..+.++.   ..+|.+....   ....+...  ........+
T Consensus       198 ~~~~------~~~~~~~~~~v~~-~~~~~~~~~~~~l~~~~~dg~---i~i~d~~~~~---~~~~~~~~--~~~~~~~~v  262 (357)
T 3i2n_A          198 RNMA------LRWETNIKNGVCS-LEFDRKDISMNKLVATSLEGK---FHVFDMRTQH---PTKGFASV--SEKAHKSTV  262 (357)
T ss_dssp             TTTE------EEEEEECSSCEEE-EEESCSSSSCCEEEEEESTTE---EEEEEEEEEE---TTTEEEEE--EEECCSSCE
T ss_pred             ccCc------eeeecCCCCceEE-EEcCCCCCCCCEEEEECCCCe---EEEEeCcCCC---cccceeee--ccCCCcCCE
Confidence            8876      4443333334444 78999   8988877766532   4444443211   11112100  001145678


Q ss_pred             EEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          416 SGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       416 ~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      ..+.|+|+++.++++....  ..+.++++..
T Consensus       263 ~~~~~~~~~~~~l~~~~~d--g~i~iwd~~~  291 (357)
T 3i2n_A          263 WQVRHLPQNRELFLTAGGA--GGLHLWKYEY  291 (357)
T ss_dssp             EEEEEETTEEEEEEEEETT--SEEEEEEEEC
T ss_pred             EEEEECCCCCcEEEEEeCC--CcEEEeecCC
Confidence            8899999998555554443  3577777654

>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A

Probab=98.71  E-value=3.1e-08  Score=107.92  Aligned_cols=135  Identities=24%  Similarity=0.345  Sum_probs=87.0

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCC----CCCCChhhhHhh
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGR----NSALKGNTLKYA  554 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~r----G~~~~g~~~~~~  554 (790)
                      |...+  .++.|..    ..+++|+||++|||+........... ....++.+.+++|+.+|||    |....+... ..
T Consensus        83 dcl~l--~v~~P~~----~~~~~Pviv~iHGGg~~~g~~~~~~~-~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~-~~  154 (498)
T 2ogt_A           83 DGLYL--NIWSPAA----DGKKRPVLFWIHGGAFLFGSGSSPWY-DGTAFAKHGDVVVVTINYRMNVFGFLHLGDSF-GE  154 (498)
T ss_dssp             CCCEE--EEEESCS----SSCCEEEEEEECCSTTTSCCTTCGGG-CCHHHHHHHTCEEEEECCCCHHHHCCCCTTTT-CG
T ss_pred             CCcEE--EEEecCC----CCCCCcEEEEEcCCccCCCCCCCCcC-CHHHHHhCCCEEEEeCCCcCchhhccCchhhc-cc
Confidence            44444  4567863    45678999999999854322222111 1234444334999999999    322222110 00


Q ss_pred             hhccCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCCC
Q psy463          555 GYRRLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVTD  621 (790)
Q Consensus       555 ~~~~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~~  621 (790)
                      .....+...+.|+..+++|+.++..  ..|+++|.|+|+|+||.++..++.... ...|+++|+.+|...
T Consensus       155 ~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~  224 (498)
T 2ogt_A          155 AYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS  224 (498)
T ss_dssp             GGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred             cccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence            0112233458899999999987521  268899999999999999988776432 347999999998765

>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*

Probab=98.71  E-value=1.2e-07  Score=93.39  Aligned_cols=91  Identities=12%  Similarity=-0.092  Sum_probs=58.8

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .+.|+++||.++..   ..|.  .....+. .++.|+.+|++|.+                ..++++.+.++.+   .+ 
T Consensus        22 ~~~l~~~hg~~~~~---~~~~--~~~~~l~-~~~~v~~~d~~g~~----------------~~~~~~~~~i~~~---~~-   75 (244)
T 2cb9_A           22 GKNLFCFPPISGFG---IYFK--DLALQLN-HKAAVYGFHFIEED----------------SRIEQYVSRITEI---QP-   75 (244)
T ss_dssp             SSEEEEECCTTCCG---GGGH--HHHHHTT-TTSEEEEECCCCST----------------THHHHHHHHHHHH---CS-
T ss_pred             CCCEEEECCCCCCH---HHHH--HHHHHhC-CCceEEEEcCCCHH----------------HHHHHHHHHHHHh---CC-
Confidence            46789999987763   2222  1223344 58999999999842                1234444433322   11 


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCC--CCceEEEEEeCCC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDP--SNVFKCGISVAPV  619 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p--~~~~~~~v~~~~~  619 (790)
                        ..++.++||||||.++..++.+.+  ...++.++..++.
T Consensus        76 --~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~  114 (244)
T 2cb9_A           76 --EGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAY  114 (244)
T ss_dssp             --SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred             --CCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCC
Confidence              357999999999999999887652  2367777777654

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=98.71  E-value=1.1e-06  Score=92.02  Aligned_cols=234  Identities=11%  Similarity=0.072  Sum_probs=120.3

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|.++++.+++     ....+......+.. +.|++.++. +++...           ....|.++|+.+++....  ..
T Consensus        96 ~i~v~d~~~~~-----~~~~~~~~~~~i~~-~~~~~~~~~-~l~s~~-----------~dg~i~iwd~~~~~~~~~--~~  155 (366)
T 3k26_A           96 IIRIINPITMQ-----CIKHYVGHGNAINE-LKFHPRDPN-LLLSVS-----------KDHALRLWNIQTDTLVAI--FG  155 (366)
T ss_dssp             EEEEECTTTCC-----EEEEEESCCSCEEE-EEECSSCTT-EEEEEE-----------TTSCEEEEETTTTEEEEE--EC
T ss_pred             EEEEEEchhce-----EeeeecCCCCcEEE-EEECCCCCC-EEEEEe-----------CCCeEEEEEeecCeEEEE--ec
Confidence            78888887763     23333333333333 466663333 332222           125788888887653211  00


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEE--------------
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSR--------------  289 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~--------------  289 (790)
                      .+.                 .....+..+.|+|||+.++....+.   .|.++|+.+++.......              
T Consensus       156 ~~~-----------------~~~~~v~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (366)
T 3k26_A          156 GVE-----------------GHRDEVLSADYDLLGEKIMSCGMDH---SLKLWRINSKRMMNAIKESYDYNPNKTNRPFI  215 (366)
T ss_dssp             STT-----------------SCSSCEEEEEECTTSSEEEEEETTS---CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCC
T ss_pred             ccc-----------------cccCceeEEEECCCCCEEEEecCCC---CEEEEECCCCccccccceeEEecCCCCccccc
Confidence            011                 4456788999999999665554432   288888887643211000              


Q ss_pred             ---e------CCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCccc-CC--------Cccc
Q psy463          290 ---D------LDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIK-DK--------VPVP  351 (790)
Q Consensus       290 ---~------~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~-~~--------~~~~  351 (790)
                         .      .............|+  |+.|+ +.+    .+|        .|.++|+.+++... ..        ....
T Consensus       216 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~----~d~--------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~  280 (366)
T 3k26_A          216 SQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL-SKS----CEN--------AIVCWKPGKMEDDIDKIKPSESNVTILGR  280 (366)
T ss_dssp             CEEECCCSEEECSSCSSCCCEEEEE--TTEEE-EEC----SSS--------EEEEEEESSTTCCGGGCCTTCCCEEEEEE
T ss_pred             ceeeccCccccccCCcceEEEEEEc--CCEEE-EEe----cCC--------EEEEEeCCCccccccccccCCcchheecc
Confidence               0      000001124467787  66555 554    455        68888887654100 00        0000


Q ss_pred             ccCCCeEEeEEEeeecC--CCEEEEEEcCCCCceEEEEEEEcCCCCCCcce-eeecccccCCCcccEEEEEEecCCcEEE
Q psy463          352 LTRGRFTVTEILAWDEK--ENNVYFLSTQGSPIVQHMYRINIADPTATPEC-ITCDLLTSANQKCSYSGATFSTNVSYYV  428 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~s~dg~~~~  428 (790)
                      +......+. .+.|+|+  ++.|+..+.++     .|+..++..  ++... ....+. .+.....+..+.|+|++++++
T Consensus       281 ~~~~~~~v~-~~~~s~~~~~~~l~~~~~dg-----~i~vwd~~~--~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~  351 (366)
T 3k26_A          281 FDYSQCDIW-YMRFSMDFWQKMLALGNQVG-----KLYVWDLEV--EDPHKAKCTTLT-HHKCGAAIRQTSFSRDSSILI  351 (366)
T ss_dssp             EECSSCCSS-CCCCEECTTSSEEEEECTTS-----CEEEEECCS--SSGGGCEEEEEC-CTTCCSCEEEEEECTTSSEEE
T ss_pred             ccccCCcEE-EEEEcCCCCCcEEEEEecCC-----cEEEEECCC--CCCccccceEEc-ccccCCceEEEEeCCCCCeEE
Confidence            111111122 2678888  88777665553     455556655  33211 111010 011146788999999999886


Q ss_pred             EEeecCCCCeEEEEec
Q psy463          429 LSCIGPGIPEIMLFDK  444 (790)
Q Consensus       429 ~~~~~~~~~~i~~~~~  444 (790)
                      .....   ..|+++++
T Consensus       352 s~~~d---g~i~iwd~  364 (366)
T 3k26_A          352 AVCDD---ASIWRWDR  364 (366)
T ss_dssp             EEETT---SEEEEEEC
T ss_pred             EEeCC---CEEEEEEe
Confidence            55322   35666665

>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17

Probab=98.71  E-value=2.8e-08  Score=109.31  Aligned_cols=134  Identities=18%  Similarity=0.248  Sum_probs=87.7

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc-hHH-HHHhcCCeEEEEEcCCCCCCChhhhHhh-hhccC
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-WNL-YLADNKDIVVAYIDGRNSALKGNTLKYA-GYRRL  559 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~~-~~~~~~G~~v~~~d~rG~~~~g~~~~~~-~~~~~  559 (790)
                      +...+|.|.+..  ..+++|+||++|||+........+... +.. .+....|++|+.+|||... .|...... .....
T Consensus       106 l~l~v~~P~~~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~-~gf~~~~~~~~~~~  182 (544)
T 1thg_A          106 LYLNVFRPAGTK--PDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FGFLGGDAITAEGN  182 (544)
T ss_dssp             CEEEEEEETTCC--TTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HHHCCSHHHHHHTC
T ss_pred             eEEEEEeCCCCC--CCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCc-ccCCCcccccccCC
Confidence            444567887643  456789999999998764433323211 122 2333468999999999743 22110000 00122


Q ss_pred             CccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcC-------CCCceEEEEEeCCC
Q psy463          560 GTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALD-------PSNVFKCGISVAPV  619 (790)
Q Consensus       560 ~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~-------p~~~~~~~v~~~~~  619 (790)
                      +...+.|+.++++|+.++..  ..|++||.|+|+|.||.++..++...       ....|+++|+.+|.
T Consensus       183 ~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~  251 (544)
T 1thg_A          183 TNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG  251 (544)
T ss_dssp             TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence            33558999999999987521  26899999999999999988776642       13478999999874

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=98.70  E-value=4.7e-07  Score=95.70  Aligned_cols=189  Identities=11%  Similarity=0.128  Sum_probs=95.1

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+|||+.|+..+. ++            .|.++++.++..  ......+......+. -..|+++++. ++..+.   
T Consensus        61 ~~~s~~~~~l~s~s~-d~------------~v~vwd~~~~~~--~~~~~~~~~~~~~v~-~~~~~~~~~~-l~~~~~---  120 (377)
T 3dwl_C           61 VDWAPKSNRIVTCSQ-DR------------NAYVYEKRPDGT--WKQTLVLLRLNRAAT-FVRWSPNEDK-FAVGSG---  120 (377)
T ss_dssp             EEECTTTCCEEEEET-TS------------SEEEC------C--CCCEEECCCCSSCEE-EEECCTTSSC-CEEEES---
T ss_pred             EEEeCCCCEEEEEeC-CC------------eEEEEEcCCCCc--eeeeeEecccCCceE-EEEECCCCCE-EEEEec---
Confidence            367999987775442 21            577777765520  001222222332332 3456665542 222211   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCC-CCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENN-VEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~-~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                               ...|.+.++.+++....  ...+.                 . ....+..+.|+|||++++....+..   
T Consensus       121 ---------d~~i~iwd~~~~~~~~~--~~~~~-----------------~~h~~~v~~~~~~~~~~~l~~~~~d~~---  169 (377)
T 3dwl_C          121 ---------ARVISVCYFEQENDWWV--SKHLK-----------------RPLRSTILSLDWHPNNVLLAAGCADRK---  169 (377)
T ss_dssp             ---------SSCEEECCC-----CCC--CEEEC-----------------SSCCSCEEEEEECTTSSEEEEEESSSC---
T ss_pred             ---------CCeEEEEEECCccccee--eeEee-----------------cccCCCeEEEEEcCCCCEEEEEeCCCE---
Confidence                     14677777776542111  12222                 2 4567889999999996665544322   


Q ss_pred             EEEEECCCCc---------------eeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEE
Q psy463          273 ITRCSINEGT---------------CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFID  337 (790)
Q Consensus       273 i~~~~~~~g~---------------~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d  337 (790)
                      |.++++..+.               ...+...-...   .......|||||+.|+ +.+    .+|        .|.++|
T Consensus       170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~l~-~~~----~d~--------~i~iwd  233 (377)
T 3dwl_C          170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSG---GWVHAVGFSPSGNALA-YAG----HDS--------SVTIAY  233 (377)
T ss_dssp             EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCS---SSEEEEEECTTSSCEE-EEE----TTT--------EEC-CE
T ss_pred             EEEEEEEecccCCCccccccccccchhhhhhcccCC---ceEEEEEECCCCCEEE-EEe----CCC--------cEEEEE
Confidence            7777765322               11111111111   1134789999999887 554    455        688889


Q ss_pred             cCCCCcccCCC----cccccCCCeEEeEEEeeecCCCEEEEE
Q psy463          338 LDDQAGIKDKV----PVPLTRGRFTVTEILAWDEKENNVYFL  375 (790)
Q Consensus       338 ~~~~~~~~~~~----~~~lt~~~~~~~~~~~~s~dg~~l~~~  375 (790)
                      +.+++     .    ...+..+...+.. +.|+|||+.|+..
T Consensus       234 ~~~~~-----~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~  269 (377)
T 3dwl_C          234 PSAPE-----QPPRALITVKLSQLPLRS-LLWANESAIVAAG  269 (377)
T ss_dssp             ECSTT-----SCEEECCCEECSSSCEEE-EEEEETTEEEEEE
T ss_pred             CCCCC-----CcceeeEeecCCCCceEE-EEEcCCCCEEEEE
Confidence            88776     1    2234444444454 8899999865443

>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*

Probab=98.70  E-value=2.4e-08  Score=106.96  Aligned_cols=112  Identities=14%  Similarity=0.047  Sum_probs=77.5

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|+||++||+++..  ...|.......+++..||.|+++|++|++.+...  .... +. ....+|+.+.++++.++.+
T Consensus        69 ~~p~vvliHG~~~~~--~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~--~~~~-~~-~~~~~dl~~li~~L~~~~g  142 (452)
T 1bu8_A           69 DRKTRFIVHGFIDKG--EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYT--QASY-NT-RVVGAEIAFLVQVLSTEMG  142 (452)
T ss_dssp             TSEEEEEECCSCCTT--CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHH--HHHH-HH-HHHHHHHHHHHHHHHHHHC
T ss_pred             CCCeEEEECCCCCCC--CchHHHHHHHHHHhhCCCEEEEEechhcccCchh--HhHh-hH-HHHHHHHHHHHHHHHHhcC
Confidence            458899999998763  1334433344555545999999999997654321  1110 00 1235667777777764223


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                       ++.+++.|+||||||.+|+.++.++|. +++.+++..|.
T Consensus       143 -~~~~~i~LvGhSlGg~vA~~~a~~~p~-~v~~iv~ldpa  180 (452)
T 1bu8_A          143 -YSPENVHLIGHSLGAHVVGEAGRRLEG-HVGRITGLDPA  180 (452)
T ss_dssp             -CCGGGEEEEEETHHHHHHHHHHHHTTT-CSSEEEEESCB
T ss_pred             -CCccceEEEEEChhHHHHHHHHHhccc-ccceEEEecCC
Confidence             556899999999999999999999885 78888888765

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.70  E-value=8.3e-06  Score=84.44  Aligned_cols=306  Identities=10%  Similarity=0.072  Sum_probs=152.5

Q ss_pred             eeEeCCCCCceEEEEecC---CceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeee-------cccc
Q psy463           12 ALWFSPSGNNLAYASFDD---NRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVN-------RVQN   81 (790)
Q Consensus        12 ~~~wSPDG~~iaf~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~-------r~~~   81 (790)
                      +..-.|||+++ |++.-.   ....++++...-++      .......... . .+..++|++.++-.+       |+..
T Consensus        37 ~~~~~pd~~~v-yV~~~~~~~~~~~V~ViD~~t~~------v~~~I~vG~~-P-~va~spDG~~lyVan~~~~r~~~G~~  107 (386)
T 3sjl_D           37 LEAPAPDARRV-YVNDPAHFAAVTQQFVIDGEAGR------VIGMIDGGFL-P-NPVVADDGSFIAHASTVFSRIARGER  107 (386)
T ss_dssp             CCCCCCCTTEE-EEEECGGGCSSEEEEEEETTTTE------EEEEEEECSS-C-EEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred             eeccCCCCCEE-EEEcCcccCCCCEEEEEECCCCe------EEEEEECCCC-C-cEEECCCCCEEEEEcccccccccCCC
Confidence            34457999975 555432   13467777664442      0001111111 1 245567777553333       2223


Q ss_pred             eeEEEEeeCCCCeeeEEEeecC-CCCccc-cCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCC
Q psy463           82 RARITRCSINEGTCDVVFSRDL-DRGWFE-PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK  159 (790)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~  159 (790)
                      .-.++++|..+.+....+.... ...-.+ .+....+||||+++|..+....           +.+.++|+.+++     
T Consensus       108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~-----------~~VsVID~~t~~-----  171 (386)
T 3sjl_D          108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA-----------PAVGVVDLEGKA-----  171 (386)
T ss_dssp             EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS-----------CEEEEEETTTTE-----
T ss_pred             CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC-----------CeEEEEECCCCc-----
Confidence            4567888988876554333221 111111 1224589999999887654222           279999998884     


Q ss_pred             cceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCC-cccccCcCCccccccccceeehhhc
Q psy463          160 VPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDD-QAGIKDKVPVPLTRGRFTVTEILAW  238 (790)
Q Consensus       160 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~lt~~~~~~~~~~~~  238 (790)
                      +...+.-....     ...|.+.+  .|+.....          ..+..+++++ ++..... . .+             
T Consensus       172 vv~tI~v~g~~-----~~~P~g~~--~~~~~~~D----------G~~~~v~~~~~g~v~~~~-~-~~-------------  219 (386)
T 3sjl_D          172 FKRMLDVPDCY-----HIFPTAPD--TFFMHCRD----------GSLAKVAFGTEGTPEITH-T-EV-------------  219 (386)
T ss_dssp             EEEEEECCSEE-----EEEEEETT--EEEEEETT----------SCEEEEECCSSSCCEEEE-C-CC-------------
T ss_pred             EEEEEECCCcc-----eeecCCCc--eeEEECCC----------CCEEEEECCCCCeEEEee-c-ce-------------
Confidence            33444221111     11122221  11122111          2444555544 3210000 0 00             


Q ss_pred             ccCCCCCCCEEEEEEEc-cCCcEEEEEeccCcceEEEEEECCCCceeEEEEEe------CCCccc-ccCCceeEccCCCE
Q psy463          239 DEKENNVEPVLSRVNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRD------LDRGWF-EPFDHLRFSSDGKK  310 (790)
Q Consensus       239 ~~~~~~~~~~~~~~~ws-pDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~------~~~~~~-~~~~~~~~spDg~~  310 (790)
                        +.........++.|. +||++++.+..+    +++++|..++..+.+-...      ...+|. +......++||+++
T Consensus       220 --~~~~~~~~~~~~~~~~~dG~~~~vs~~g----~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~  293 (386)
T 3sjl_D          220 --FHPEDEFLINHPAYSQKAGRLVWPTYTG----KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR  293 (386)
T ss_dssp             --CSCTTSCBCSCCEEETTTTEEEEEBTTS----EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTE
T ss_pred             --eccccccccccceeEcCCCcEEEEeCCC----EEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCe
Confidence              000111112234664 789866554432    4999999877543322111      002232 11235788999999


Q ss_pred             EEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463          311 MLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       311 i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~  390 (790)
                      +|+....  ...|.+ -+.-.+|+++|+.+++     ..+.+.-+. ... .+.+++|++.++|.++.+.   ..|.+++
T Consensus       294 lyV~~~~--~~~~~h-k~~~~~V~viD~~t~k-----v~~~i~vg~-~~~-~lavs~D~~~~ly~tn~~~---~~VsViD  360 (386)
T 3sjl_D          294 IYLLVDQ--RDEWRH-KTASRFVVVLDAKTGE-----RLAKFEMGH-EID-SINVSQDEKPLLYALSTGD---KTLYIHD  360 (386)
T ss_dssp             EEEEEEE--CCTTCT-TSCEEEEEEEETTTCC-----EEEEEEEEE-EEC-EEEECSSSSCEEEEEETTT---TEEEEEE
T ss_pred             EEEEecc--cccccc-CCCCCEEEEEECCCCe-----EEEEEECCC-Ccc-eEEECCCCCeEEEEEcCCC---CeEEEEE
Confidence            9854421  011110 0003589999999887     234443332 222 3789999986666666644   5788999


Q ss_pred             cCC
Q psy463          391 IAD  393 (790)
Q Consensus       391 ~~~  393 (790)
                      ..+
T Consensus       361 ~~t  363 (386)
T 3sjl_D          361 AES  363 (386)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            876

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=98.68  E-value=1.9e-06  Score=87.53  Aligned_cols=239  Identities=10%  Similarity=-0.008  Sum_probs=132.3

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+|+|||+.|+++....+            .|++++.+++.       ..+.... ....-+.++++++  ++. ...
T Consensus        31 eg~~~d~~g~~l~~~~~~~~------------~i~~~~~~~~~-------~~~~~~~-~~~~~l~~~~dg~--l~v-~~~   87 (296)
T 3e5z_A           31 EGPVYVPARSAVIFSDVRQN------------RTWAWSDDGQL-------SPEMHPS-HHQNGHCLNKQGH--LIA-CSH   87 (296)
T ss_dssp             EEEEEEGGGTEEEEEEGGGT------------EEEEEETTSCE-------EEEESSC-SSEEEEEECTTCC--EEE-EET
T ss_pred             cCCeEeCCCCEEEEEeCCCC------------EEEEEECCCCe-------EEEECCC-CCcceeeECCCCc--EEE-Eec
Confidence            45899999998888775433            79999987651       1221111 1122345666554  433 321


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEec-----
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNR-----  266 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r-----  266 (790)
                                ....|++++.++|+.+      .+......            ........+.++|||++++....     
T Consensus        88 ----------~~~~i~~~d~~~g~~~------~~~~~~~~------------~~~~~~~~i~~d~~G~l~vtd~~~g~~~  139 (296)
T 3e5z_A           88 ----------GLRRLERQREPGGEWE------SIADSFEG------------KKLNSPNDVCLAPDGSLWFSDPTYGIDK  139 (296)
T ss_dssp             ----------TTTEEEEECSTTCCEE------EEECEETT------------EECCCCCCEEECTTSCEEEEECSHHHHC
T ss_pred             ----------CCCeEEEEcCCCCcEE------EEeeccCC------------CCCCCCCCEEECCCCCEEEECCcccccc
Confidence                      1157899998776532      11100000            00112235789999994442110     


Q ss_pred             ---------cCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEE
Q psy463          267 ---------VQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFID  337 (790)
Q Consensus       267 ---------~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d  337 (790)
                               ......|+.++.+ ++.+.+....      .....+.|+|||+.+ +..+    ..        ..|++++
T Consensus       140 ~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~------~~~~gi~~s~dg~~l-v~~~----~~--------~~i~~~~  199 (296)
T 3e5z_A          140 PEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR------VKPNGLAFLPSGNLL-VSDT----GD--------NATHRYC  199 (296)
T ss_dssp             GGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC------SSEEEEEECTTSCEE-EEET----TT--------TEEEEEE
T ss_pred             ccccccccccCCCcEEEEECCC-CCEEEeecCC------CCCccEEECCCCCEE-EEeC----CC--------CeEEEEE
Confidence                     1112369999887 6555443221      112468999999987 4443    22        3789998


Q ss_pred             cC-CCCcccCCCc----ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCc
Q psy463          338 LD-DQAGIKDKVP----VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQK  412 (790)
Q Consensus       338 ~~-~~~~~~~~~~----~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~  412 (790)
                      ++ .++      .    +.+........+ +.++++|+ |++.. .     ..|++++.++  .....+..       ..
T Consensus       200 ~~~~g~------~~~~~~~~~~~~~~p~~-i~~d~~G~-l~v~~-~-----~~v~~~~~~g--~~~~~~~~-------~~  256 (296)
T 3e5z_A          200 LNARGE------TEYQGVHFTVEPGKTDG-LRVDAGGL-IWASA-G-----DGVHVLTPDG--DELGRVLT-------PQ  256 (296)
T ss_dssp             ECSSSC------EEEEEEEECCSSSCCCS-EEEBTTSC-EEEEE-T-----TEEEEECTTS--CEEEEEEC-------SS
T ss_pred             ECCCCc------CcCCCeEeeCCCCCCCe-EEECCCCC-EEEEc-C-----CeEEEECCCC--CEEEEEEC-------CC
Confidence            86 343      2    122111111223 68899997 66665 2     3688888765  33333332       22


Q ss_pred             ccEEEEEE-ecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          413 CSYSGATF-STNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       413 ~~~~~~~~-s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      . ...+.| +||++.|+.+..    ..++.++.+++++
T Consensus       257 ~-~~~~~f~~~d~~~L~v~t~----~~l~~~~~~~~~~  289 (296)
T 3e5z_A          257 T-TSNLCFGGPEGRTLYMTVS----TEFWSIETNVRGL  289 (296)
T ss_dssp             C-CCEEEEESTTSCEEEEEET----TEEEEEECSCCBC
T ss_pred             C-ceeEEEECCCCCEEEEEcC----CeEEEEEcccccc
Confidence            2 566778 589988877643    2588888766543

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=98.67  E-value=7.4e-07  Score=92.86  Aligned_cols=232  Identities=14%  Similarity=0.059  Sum_probs=122.6

Q ss_pred             EEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceec
Q psy463           85 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  164 (790)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~l  164 (790)
                      +.+++..+++..........    .....+.|+|||+.+++.....            ..|+++++++++     ....+
T Consensus        23 v~~~d~~~~~~~~~~~~~~~----~~~~~~~~s~dg~~~~v~~~~~------------~~i~~~d~~t~~-----~~~~~   81 (349)
T 1jmx_B           23 LHVVDVASDTVYKSCVMPDK----FGPGTAMMAPDNRTAYVLNNHY------------GDIYGIDLDTCK-----NTFHA   81 (349)
T ss_dssp             EEEEETTTTEEEEEEECSSC----CSSCEEEECTTSSEEEEEETTT------------TEEEEEETTTTE-----EEEEE
T ss_pred             EEEEECCCCcEEEEEecCCC----CCCceeEECCCCCEEEEEeCCC------------CcEEEEeCCCCc-----EEEEE
Confidence            44556666654443332210    0123568999999877765322            289999998774     22222


Q ss_pred             cccc-----eEEEEEEeeeccCCccEEEEeccc-CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhc
Q psy463          165 TRGR-----FTVTEILAWDERENNPLLILSHNQ-ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW  238 (790)
Q Consensus       165 t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~  238 (790)
                      ..+.     .....-..++++++  .+|+.... ......+......|+++|+++++..+.   ....            
T Consensus        82 ~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~---~~~~------------  144 (349)
T 1jmx_B           82 NLSSVPGEVGRSMYSFAISPDGK--EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP---VRTF------------  144 (349)
T ss_dssp             ESCCSTTEEEECSSCEEECTTSS--EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC---SEEE------------
T ss_pred             EcccccccccccccceEECCCCC--EEEEEcccccccccccccCCCeEEEEECCCccccce---eeec------------
Confidence            2111     11112246777766  34443321 000000001126899999988653211   0110            


Q ss_pred             ccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeC--CCcc---------c-----------
Q psy463          239 DEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDL--DRGW---------F-----------  296 (790)
Q Consensus       239 ~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~--~~~~---------~-----------  296 (790)
                           ........++|+|||+ ++....     .|+++|+.+++.........  ...+         .           
T Consensus       145 -----~~~~~~~~~~~s~dg~-l~~~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (349)
T 1jmx_B          145 -----PMPRQVYLMRAADDGS-LYVAGP-----DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSML  213 (349)
T ss_dssp             -----ECCSSCCCEEECTTSC-EEEESS-----SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEE
T ss_pred             -----cCCCcccceeECCCCc-EEEccC-----cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEee
Confidence                 1122345677999999 444322     18889988887654332110  0000         0           


Q ss_pred             -----------------------------------------ccCCceeEcc-CCCEEEEEEccccccCCCCCcCcccEEE
Q psy463          297 -----------------------------------------EPFDHLRFSS-DGKKMLLILSHNQESDGSTPVDSWDHLT  334 (790)
Q Consensus       297 -----------------------------------------~~~~~~~~sp-Dg~~i~~~~~~~~~~~g~~~~~~~~~l~  334 (790)
                                                               .......||| ||+.+++. .      +        .|+
T Consensus       214 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~------~--------~v~  278 (349)
T 1jmx_B          214 YTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-L------N--------RLA  278 (349)
T ss_dssp             EEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-E------S--------EEE
T ss_pred             eeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-c------C--------eEE
Confidence                                                     0012456779 99877643 2      3        699


Q ss_pred             EEEcCCCCcccCCCc-ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          335 FIDLDDQAGIKDKVP-VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       335 ~~d~~~~~~~~~~~~-~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ++|+.+++      . ..+..+. .... ++|+|||+.|+.....     ..|+++++++
T Consensus       279 ~~d~~~~~------~~~~~~~~~-~~~~-~~~s~dg~~l~~~~~~-----~~v~v~d~~~  325 (349)
T 1jmx_B          279 KYDLKQRK------LIKAANLDH-TYYC-VAFDKKGDKLYLGGTF-----NDLAVFNPDT  325 (349)
T ss_dssp             EEETTTTE------EEEEEECSS-CCCE-EEECSSSSCEEEESBS-----SEEEEEETTT
T ss_pred             EEECccCe------EEEEEcCCC-Cccc-eEECCCCCEEEEecCC-----CeEEEEeccc
Confidence            99998876      3 2332222 2233 7899999988874322     4678888765

>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...

Probab=98.66  E-value=4.2e-08  Score=108.10  Aligned_cols=134  Identities=19%  Similarity=0.177  Sum_probs=85.8

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCC-CCChhhhHhhhhc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS-ALKGNTLKYAGYR  557 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~-~~~g~~~~~~~~~  557 (790)
                      |...+  .+|.|...   ..+++|+||++|||+.......... .....++++.|++|+.+|||.. -++....  ....
T Consensus        95 dcl~l--~v~~P~~~---~~~~~Pviv~iHGGg~~~g~~~~~~-~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~--~~~~  166 (543)
T 2ha2_A           95 DCLYL--NVWTPYPR---PASPTPVLIWIYGGGFYSGAASLDV-YDGRFLAQVEGAVLVSMNYRVGTFGFLALP--GSRE  166 (543)
T ss_dssp             CCCEE--EEEEESSC---CSSCEEEEEEECCSTTTCCCTTSGG-GCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCSS
T ss_pred             cCCeE--EEeecCCC---CCCCCeEEEEECCCccccCCCCCCc-CChHHHHhcCCEEEEEecccccccccccCC--CCCC
Confidence            45444  45567642   2456899999999986533222111 1123444447999999999942 1111000  0011


Q ss_pred             cCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCC
Q psy463          558 RLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVT  620 (790)
Q Consensus       558 ~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~  620 (790)
                      ..+...+.|+..+++|+.++..  ..|++||.|+|+|.||.++..++.... ...|+++|+.+|..
T Consensus       167 ~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~  232 (543)
T 2ha2_A          167 APGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP  232 (543)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence            1233458899999999987521  268999999999999999987776421 24799999998854

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=98.66  E-value=2.3e-07  Score=98.12  Aligned_cols=233  Identities=10%  Similarity=0.087  Sum_probs=118.4

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...|+|||+.|+..+.             -+.|.++++.++..   +....+......+.. +.|+++++. ++..+.  
T Consensus        16 ~~~~s~~g~~l~~~~~-------------d~~i~iw~~~~~~~---~~~~~~~~h~~~v~~-~~~s~~~~~-l~s~s~--   75 (377)
T 3dwl_C           16 EHAFNSQRTEFVTTTA-------------TNQVELYEQDGNGW---KHARTFSDHDKIVTC-VDWAPKSNR-IVTCSQ--   75 (377)
T ss_dssp             CCEECSSSSEEECCCS-------------SSCBCEEEEETTEE---EECCCBCCCSSCEEE-EEECTTTCC-EEEEET--
T ss_pred             EEEECCCCCEEEEecC-------------CCEEEEEEccCCce---EEEEEEecCCceEEE-EEEeCCCCE-EEEEeC--
Confidence            4689999998774321             12466666655410   012233333333333 466666542 222221  


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                                ...|.+.++.+++....  ...+.                 .....+..+.|+|||+.++....+.   .
T Consensus        76 ----------d~~v~vwd~~~~~~~~~--~~~~~-----------------~~~~~v~~~~~~~~~~~l~~~~~d~---~  123 (377)
T 3dwl_C           76 ----------DRNAYVYEKRPDGTWKQ--TLVLL-----------------RLNRAATFVRWSPNEDKFAVGSGAR---V  123 (377)
T ss_dssp             ----------TSSEEEC------CCCC--EEECC-----------------CCSSCEEEEECCTTSSCCEEEESSS---C
T ss_pred             ----------CCeEEEEEcCCCCceee--eeEec-----------------ccCCceEEEEECCCCCEEEEEecCC---e
Confidence                      14677777776541000  11122                 4456688999999999555544332   2


Q ss_pred             EEEEECCCCce---eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccC---
Q psy463          273 ITRCSINEGTC---DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD---  346 (790)
Q Consensus       273 i~~~~~~~g~~---~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~---  346 (790)
                      |.++++.+++.   ....... ..   .......|+|||+.|+ +.+    .+|        .|.++|+..++....   
T Consensus       124 i~iwd~~~~~~~~~~~~~~~~-h~---~~v~~~~~~~~~~~l~-~~~----~d~--------~i~iwd~~~~~~~~~~~~  186 (377)
T 3dwl_C          124 ISVCYFEQENDWWVSKHLKRP-LR---STILSLDWHPNNVLLA-AGC----ADR--------KAYVLSAYVRDVDAKPEA  186 (377)
T ss_dssp             EEECCC-----CCCCEEECSS-CC---SCEEEEEECTTSSEEE-EEE----SSS--------CEEEEEECCSSCC-CCCS
T ss_pred             EEEEEECCcccceeeeEeecc-cC---CCeEEEEEcCCCCEEE-EEe----CCC--------EEEEEEEEecccCCCccc
Confidence            88888887752   2222110 11   1244789999999887 555    455        477777643210000   


Q ss_pred             ---------C-CcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-----ceeeecccccCCC
Q psy463          347 ---------K-VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-----ECITCDLLTSANQ  411 (790)
Q Consensus       347 ---------~-~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~lt~~~~~~~~~  411 (790)
                               . ....+ .....+.. ++|+|||+.|+..+.++     .|...++.+  ++.     ..+..       .
T Consensus       187 ~~~~~~~~~~~~~~~~-~~~~~v~~-~~~sp~~~~l~~~~~d~-----~i~iwd~~~--~~~~~~~~~~~~~-------~  250 (377)
T 3dwl_C          187 SVWGSRLPFNTVCAEY-PSGGWVHA-VGFSPSGNALAYAGHDS-----SVTIAYPSA--PEQPPRALITVKL-------S  250 (377)
T ss_dssp             CSSCSCCCEEEEEECC-CCSSSEEE-EEECTTSSCEEEEETTT-----EEC-CEECS--TTSCEEECCCEEC-------S
T ss_pred             cccccccchhhhhhcc-cCCceEEE-EEECCCCCEEEEEeCCC-----cEEEEECCC--CCCcceeeEeecC-------C
Confidence                     0 01112 22223444 78999999887777663     344445544  221     22222       4


Q ss_pred             cccEEEEEEecCCcEEEEE
Q psy463          412 KCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       412 ~~~~~~~~~s~dg~~~~~~  430 (790)
                      ...+..+.|+||+++++..
T Consensus       251 ~~~v~~~~~s~~~~~l~~~  269 (377)
T 3dwl_C          251 QLPLRSLLWANESAIVAAG  269 (377)
T ss_dssp             SSCEEEEEEEETTEEEEEE
T ss_pred             CCceEEEEEcCCCCEEEEE
Confidence            5567889999999987554

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=98.66  E-value=4.3e-06  Score=90.71  Aligned_cols=258  Identities=9%  Similarity=0.076  Sum_probs=140.7

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCcccc-CCCCccccccCCCcceeEeeeecccceeEEEE
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAIN-LREPVLSRVNWANESVVAAWVNRVQNRARITR   87 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~   87 (790)
                      ...++.|||||++|+++...++...+|.+...++.         ... +..+                            
T Consensus       104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~---------~~~~~~~~----------------------------  146 (450)
T 2vdu_B          104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN---------VLKLRKRF----------------------------  146 (450)
T ss_dssp             CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS---------CEEEEEEE----------------------------
T ss_pred             ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc---------eeeeeecc----------------------------
Confidence            35678899999998777777888888887642332         110 0000                            


Q ss_pred             eeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecccc
Q psy463           88 CSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG  167 (790)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~  167 (790)
                       .. ..                ......|+|||+.|+..+.             ...++++++.++..... ....+...
T Consensus       147 -~~-~~----------------~v~~~~~sp~~~~l~~~~~-------------~g~v~~~~~~~~~~~~~-~~~~~~~h  194 (450)
T 2vdu_B          147 -CF-SK----------------RPNAISIAEDDTTVIIADK-------------FGDVYSIDINSIPEEKF-TQEPILGH  194 (450)
T ss_dssp             -EC-SS----------------CEEEEEECTTSSEEEEEET-------------TSEEEEEETTSCCCSSC-CCCCSEEC
T ss_pred             -cC-CC----------------CceEEEEcCCCCEEEEEeC-------------CCcEEEEecCCcccccc-cceeeecc
Confidence             00 00                0012378999998876542             22799999877641100 11123323


Q ss_pred             ceEEEEEEeeecc---CCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCcc-ccccccceeehhhcccCCC
Q psy463          168 RFTVTEILAWDER---ENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRFTVTEILAWDEKEN  243 (790)
Q Consensus       168 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~  243 (790)
                      ...+. -+.|+++   +.  .++....           ...|+++++.+++.     ... +.                 
T Consensus       195 ~~~v~-~~~~sp~~~~~~--~l~s~~~-----------d~~i~vwd~~~~~~-----~~~~~~-----------------  238 (450)
T 2vdu_B          195 VSMLT-DVHLIKDSDGHQ--FIITSDR-----------DEHIKISHYPQCFI-----VDKWLF-----------------  238 (450)
T ss_dssp             SSCEE-EEEEEECTTSCE--EEEEEET-----------TSCEEEEEESCTTC-----EEEECC-----------------
T ss_pred             cCceE-EEEEcCCCCCCc--EEEEEcC-----------CCcEEEEECCCCce-----eeeeec-----------------
Confidence            32333 3467776   32  3332221           15788888877652     111 21                 


Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeC--------------------CCcccccCCcee
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDL--------------------DRGWFEPFDHLR  303 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~--------------------~~~~~~~~~~~~  303 (790)
                      .....+..+.|+ ||++++....+.   .|.++|+.++++........                    ..........+.
T Consensus       239 ~h~~~v~~~~~s-d~~~l~s~~~d~---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~  314 (450)
T 2vdu_B          239 GHKHFVSSICCG-KDYLLLSAGGDD---KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII  314 (450)
T ss_dssp             CCSSCEEEEEEC-STTEEEEEESSS---EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred             CCCCceEEEEEC-CCCEEEEEeCCC---eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence            345678899999 999666554332   49999999988655443110                    000001134679


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEc--CCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC-CC
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL--DDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ-GS  380 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~--~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~-~~  380 (790)
                      |+|||+.|+. .+   ..++        .|.++++  ..+....  ....+..+ ..+.. ++|+|+ + +++.... ..
T Consensus       315 ~~~~~~~l~~-~~---~~d~--------~i~iw~~~~~~~~~l~--~~~~~~~~-~~v~~-~~~~~~-~-~~v~~~~~~~  376 (450)
T 2vdu_B          315 KSKNLPFVAF-FV---EATK--------CIIILEMSEKQKGDLA--LKQIITFP-YNVIS-LSAHND-E-FQVTLDNKES  376 (450)
T ss_dssp             ECSSSSEEEE-EE---TTCS--------EEEEEEECSSSTTCEE--EEEEEECS-SCEEE-EEEETT-E-EEEEECCTTC
T ss_pred             EeCCCCEEEE-EE---CCCC--------eEEEEEeccCCCCcee--eccEeccC-CceEE-EEecCC-c-EEEEEecccC
Confidence            9999998874 43   2344        6778887  3331000  12223322 33444 789995 3 4444332 22


Q ss_pred             C----ceEEEEEEEcCC
Q psy463          381 P----IVQHMYRINIAD  393 (790)
Q Consensus       381 ~----~~~~l~~~~~~~  393 (790)
                      +    ....||.++..+
T Consensus       377 ~~~~~~~i~v~~~~~~~  393 (450)
T 2vdu_B          377 SGVQKNFAKFIEYNLNE  393 (450)
T ss_dssp             CSSCCCSEEEEEEETTT
T ss_pred             CCCCCcceEEEEEEcCC
Confidence            1    124788887665

>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}

Probab=98.65  E-value=4e-08  Score=105.24  Aligned_cols=112  Identities=13%  Similarity=0.027  Sum_probs=76.6

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|+||++||.++..  ...|.......+++..||.|+++|++|++.+...  .... .. ....+|+.+.++++.++.+
T Consensus        69 ~~p~vvliHG~~~~~--~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~--~~~~-~~-~~~~~dl~~~i~~L~~~~g  142 (452)
T 1w52_X           69 SRKTHFVIHGFRDRG--EDSWPSDMCKKILQVETTNCISVDWSSGAKAEYT--QAVQ-NI-RIVGAETAYLIQQLLTELS  142 (452)
T ss_dssp             TSCEEEEECCTTCCS--SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHH--HHHH-HH-HHHHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEEcCCCCCC--CchHHHHHHHHHHhhCCCEEEEEecccccccccH--HHHH-hH-HHHHHHHHHHHHHHHHhcC
Confidence            358899999988763  1334433344555545999999999987654321  1110 00 1234566777777764223


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                       ++.+++.|+||||||.+|..++.++|. +++.+++..|.
T Consensus       143 -~~~~~i~LvGhSlGg~vA~~~a~~~p~-~v~~iv~ldpa  180 (452)
T 1w52_X          143 -YNPENVHIIGHSLGAHTAGEAGRRLEG-RVGRVTGLDPA  180 (452)
T ss_dssp             -CCGGGEEEEEETHHHHHHHHHHHHTTT-CSSEEEEESCB
T ss_pred             -CCcccEEEEEeCHHHHHHHHHHHhccc-ceeeEEecccc
Confidence             456899999999999999999999885 78888888765

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=98.64  E-value=1.1e-05  Score=82.51  Aligned_cols=284  Identities=10%  Similarity=0.090  Sum_probs=155.1

Q ss_pred             cccccCCCcceeEeeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCc
Q psy463           61 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  140 (790)
Q Consensus        61 ~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g  140 (790)
                      ...+.|++++....  .-   ...+.+++..++++..++.......++   ....|+|||+.|+-.+ .+          
T Consensus        28 ~~~l~WS~~~~lAv--g~---D~tV~iWd~~tg~~~~~~~~~~~~~~V---~~v~~~~~~~~l~sgs-~D----------   88 (318)
T 4ggc_A           28 LNLVDWSSGNVLAV--AL---DNSVYLWSASSGDILQLLQMEQPGEYI---SSVAWIKEGNYLAVGT-SS----------   88 (318)
T ss_dssp             CBCEEECTTSEEEE--EE---TTEEEEEETTTCCEEEEEECCSTTCCE---EEEEECTTSSEEEEEE-TT----------
T ss_pred             ceEEEECCCCEEEE--Ee---CCEEEEEECCCCCEEEEEEecCCCCeE---EEEEECCCCCEEEEEE-CC----------
Confidence            44567887664222  11   235788999999888777654444333   3458999999877433 22          


Q ss_pred             CCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCc
Q psy463          141 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK  220 (790)
Q Consensus       141 ~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  220 (790)
                        +.|.++++.+++     ....+..+...+.   .+...+.  ++.....           ...+...+...+...   
T Consensus        89 --g~v~iw~~~~~~-----~~~~~~~h~~~~~---~~~~~~~--~l~s~~~-----------~~~~~~~~~~~~~~~---  142 (318)
T 4ggc_A           89 --AEVQLWDVQQQK-----RLRNMTSHSARVG---SLSWNSY--ILSSGSR-----------SGHIHHHDVRVAEHH---  142 (318)
T ss_dssp             --SEEEEEETTTTE-----EEEEEECCSSCEE---EEEEETT--EEEEEET-----------TSEEEEEETTSSSCE---
T ss_pred             --CcEEEeecCCce-----eEEEecCccceEE---EeecCCC--EEEEEec-----------CCceEeeecCCCcee---
Confidence              278888887773     2222222222222   1222222  2222111           133444444333210   


Q ss_pred             CCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCcee--EEEEEeCCCccccc
Q psy463          221 VPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCD--VVFSRDLDRGWFEP  298 (790)
Q Consensus       221 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~--~l~~~~~~~~~~~~  298 (790)
                       ...+.                 ..........|+++|+.++....+.   .|.+.|+.+++..  .+.......   ..
T Consensus       143 -~~~~~-----------------~~~~~~~~~~~~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~---~~  198 (318)
T 4ggc_A          143 -VATLS-----------------GHSQEVCGLRWAPDGRHLASGGNDN---LVNVWPSAPGEGGWVPLQTFTQHQ---GA  198 (318)
T ss_dssp             -EEEEE-----------------CCSSCEEEEEECTTSSEEEEEETTS---CEEEEESSCBTTBSCCSEEECCCC---SC
T ss_pred             -EEEEc-----------------CccCceEEEEEcCCCCEEEEEecCc---ceeEEECCCCcccccceeeecccC---Cc
Confidence             01111                 3445577889999999665554433   2888888876532  111111111   11


Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      .....++|++..++.+.+    ...      ...|.+++...+.      ..........+.. ..|+++++.++..+..
T Consensus       199 v~~~~~~~~~~~~~~~~~----~~~------~~~i~lwd~~~~~------~~~~~~~~~~v~~-~~~~~~~~~~~~~sg~  261 (318)
T 4ggc_A          199 VKAVAWCPWQSNVLATGG----GTS------DRHIRIWNVCSGA------CLSAVDAHSQVCS-ILWSPHYKELISGHGF  261 (318)
T ss_dssp             EEEEEECTTSTTEEEEEE----CTT------TCEEEEEETTTCC------EEEEEECSSCEEE-EEEETTTTEEEEEECT
T ss_pred             eEEEEecCCCCcEEEEEe----cCC------CCEEEEEeccccc------ccccccceeeeee-eeecccccceEEEEEc
Confidence            346789999888775554    111      2368888877665      3322222223333 7899999988877644


Q ss_pred             CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                      ..   ..|+..++.+  ++.  +..    +.++...+..+.|||||++|+-... .  ..|.++++
T Consensus       262 ~d---~~i~iwd~~~--~~~--~~~----l~gH~~~V~~l~~spdg~~l~S~s~-D--~~v~iWd~  313 (318)
T 4ggc_A          262 AQ---NQLVIWKYPT--MAK--VAE----LKGHTSRVLSLTMSPDGATVASAAA-D--ETLRLWRC  313 (318)
T ss_dssp             TT---CCEEEEETTT--CCE--EEE----ECCCSSCEEEEEECTTSSCEEEEET-T--TEEEEECC
T ss_pred             CC---CEEEEEECCC--CcE--EEE----EcCCCCCEEEEEEcCCCCEEEEEec-C--CeEEEEEC
Confidence            22   4566667765  332  211    1124567889999999998764322 2  34666654

>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22

Probab=98.64  E-value=2e-07  Score=90.92  Aligned_cols=90  Identities=11%  Similarity=-0.044  Sum_probs=57.9

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY  580 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~  580 (790)
                      .+.|+++||.++..   ..|.  .....+. . +.|+.+|++|.+.                ...++.+.++.+.   . 
T Consensus        17 ~~~l~~~hg~~~~~---~~~~--~~~~~l~-~-~~v~~~d~~g~~~----------------~~~~~~~~i~~~~---~-   69 (230)
T 1jmk_C           17 EQIIFAFPPVLGYG---LMYQ--NLSSRLP-S-YKLCAFDFIEEED----------------RLDRYADLIQKLQ---P-   69 (230)
T ss_dssp             SEEEEEECCTTCCG---GGGH--HHHHHCT-T-EEEEEECCCCSTT----------------HHHHHHHHHHHHC---C-
T ss_pred             CCCEEEECCCCCch---HHHH--HHHHhcC-C-CeEEEecCCCHHH----------------HHHHHHHHHHHhC---C-
Confidence            36789999987763   2222  2223344 4 9999999997432                1334444443321   1 


Q ss_pred             cCCCceEEEEechHHHHHHHHHhcCC--CCceEEEEEeCCC
Q psy463          581 IDKTRTAIWGWSYGGYATGLALALDP--SNVFKCGISVAPV  619 (790)
Q Consensus       581 ~d~~ri~i~G~S~GG~~a~~~a~~~p--~~~~~~~v~~~~~  619 (790)
                        ..++.++|||+||.++..++.+.+  ...++.++..++.
T Consensus        70 --~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~  108 (230)
T 1jmk_C           70 --EGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSY  108 (230)
T ss_dssp             --SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred             --CCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCC
Confidence              257999999999999999887653  1357777776654

>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*

Probab=98.64  E-value=2.9e-08  Score=104.83  Aligned_cols=114  Identities=13%  Similarity=0.011  Sum_probs=73.8

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCe---EEEEEcCCCCCCC----------hhh--hH------------
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI---VVAYIDGRNSALK----------GNT--LK------------  552 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~---~v~~~d~rG~~~~----------g~~--~~------------  552 (790)
                      ..|.||++||.+++.   ..|.  .....++++||   .|+++|++|++.+          |..  ..            
T Consensus        21 ~~ppVVLlHG~g~s~---~~w~--~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l   95 (484)
T 2zyr_A           21 DFRPVVFVHGLAGSA---GQFE--SQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETL   95 (484)
T ss_dssp             CCCCEEEECCTTCCG---GGGH--HHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHH
T ss_pred             CCCEEEEECCCCCCH---HHHH--HHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccc
Confidence            456789999998763   3333  23344555899   6999999986532          000  00            


Q ss_pred             -hhhhc---cCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEeCCCCC
Q psy463          553 -YAGYR---RLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISVAPVTD  621 (790)
Q Consensus       553 -~~~~~---~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~~~~~~  621 (790)
                       .....   ......++++.+.++.+.++.+   ..++.++||||||.+++.++.++|.  ..++.+|+++|..+
T Consensus        96 ~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg---~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~  167 (484)
T 2zyr_A           96 DKILSKSRERLIDETFSRLDRVIDEALAESG---ADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG  167 (484)
T ss_dssp             HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHC---CSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred             cccccccccCchhhhHHHHHHHHHHHHHHhC---CCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence             00000   0011235667777777776433   4789999999999999999998762  37888888887643

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=98.64  E-value=2.9e-06  Score=89.34  Aligned_cols=124  Identities=11%  Similarity=0.062  Sum_probs=73.0

Q ss_pred             CCCCEEEEEEEcc-------------CCcEEEEEeccCcceEEEEEECCCCcee--EEEEEeCCCcccccCCceeEccC-
Q psy463          244 NVEPVLSRVNWAN-------------ESVVAAWVNRVQNRARITRCSINEGTCD--VVFSRDLDRGWFEPFDHLRFSSD-  307 (790)
Q Consensus       244 ~~~~~~~~~~wsp-------------Dg~~~~~~~r~~~~~~i~~~~~~~g~~~--~l~~~~~~~~~~~~~~~~~~spD-  307 (790)
                      .....+..+.|+|             |++.++....+.   .|.++|+.++...  .+........   ....+.|+|| 
T Consensus       145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~h~~---~v~~~~~sp~~  218 (379)
T 3jrp_A          145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN---LVKIWKYNSDAQTYVLESTLEGHSD---WVRDVAWSPTV  218 (379)
T ss_dssp             CCTTCEEEEEECCCC----------CTTCEEEEEETTS---CEEEEEEETTTTEEEEEEEECCCSS---CEEEEEECCCC
T ss_pred             CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC---eEEEEEecCCCcceeeEEEEecccC---cEeEEEECCCC
Confidence            4455678999999             688555554432   2777777665432  2222221111   2347899999 


Q ss_pred             --CCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc--CCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          308 --GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT--RGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       308 --g~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                        |+.|+ +.+    .+|        .|.++|+.+++...  ....+.  .....+.. ++|+|||+.|+..+.++.   
T Consensus       219 ~~~~~l~-s~~----~dg--------~i~iwd~~~~~~~~--~~~~~~~~~~~~~v~~-~~~s~~g~~l~~~~~dg~---  279 (379)
T 3jrp_A          219 LLRSYLA-SVS----QDR--------TCIIWTQDNEQGPW--KKTLLKEEKFPDVLWR-ASWSLSGNVLALSGGDNK---  279 (379)
T ss_dssp             SSSEEEE-EEE----TTS--------CEEEEEESSTTSCC--EEEESSSSCCSSCEEE-EEECSSSCCEEEEESSSS---
T ss_pred             CCCCeEE-EEe----CCC--------EEEEEeCCCCCccc--eeeeeccccCCCcEEE-EEEcCCCCEEEEecCCCc---
Confidence              67665 555    456        57788877653000  011121  12333444 899999998888777654   


Q ss_pred             EEEEEEEcC
Q psy463          384 QHMYRINIA  392 (790)
Q Consensus       384 ~~l~~~~~~  392 (790)
                      ..+|.++..
T Consensus       280 i~iw~~~~~  288 (379)
T 3jrp_A          280 VTLWKENLE  288 (379)
T ss_dssp             EEEEEEEET
T ss_pred             EEEEeCCCC
Confidence            677777643

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=98.63  E-value=7.1e-06  Score=86.34  Aligned_cols=251  Identities=11%  Similarity=0.113  Sum_probs=133.4

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      .+|+|||+.|+..+. ++            .|.++++.++..   +....+......+.. +.|.++.+..+++....  
T Consensus        17 ~~~s~~~~~l~~~~~-dg------------~i~iw~~~~~~~---~~~~~~~~h~~~v~~-~~~~~~~~~~~l~s~~~--   77 (379)
T 3jrp_A           17 AVLDYYGKRLATCSS-DK------------TIKIFEVEGETH---KLIDTLTGHEGPVWR-VDWAHPKFGTILASCSY--   77 (379)
T ss_dssp             EEECSSSSEEEEEET-TS------------CEEEEEEETTEE---EEEEEECCCSSCEEE-EEECCGGGCSEEEEEET--
T ss_pred             EEEcCCCCEEEEEEC-CC------------cEEEEecCCCcc---eeeeEecCCCCcEEE-EEeCCCCCCCEEEEecc--
Confidence            578999998775432 21            566666653310   122333333333433 35544421113333221  


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccC--CcEEEEEeccCcce
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANE--SVVAAWVNRVQNRA  271 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~~~~~~r~~~~~  271 (790)
                               ...|.+.++.+++...   ...+.                 .....+..+.|+|+  |++++....+.   
T Consensus        78 ---------dg~v~iwd~~~~~~~~---~~~~~-----------------~~~~~v~~~~~~~~~~~~~l~~~~~d~---  125 (379)
T 3jrp_A           78 ---------DGKVLIWKEENGRWSQ---IAVHA-----------------VHSASVNSVQWAPHEYGPLLLVASSDG---  125 (379)
T ss_dssp             ---------TSCEEEEEEETTEEEE---EEEEC-----------------CCSSCEEEEEECCGGGCSEEEEEETTS---
T ss_pred             ---------CCEEEEEEcCCCceeE---eeeec-----------------CCCcceEEEEeCCCCCCCEEEEecCCC---
Confidence                     1467777777654111   11111                 34566889999999  88666554433   


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEcc-------------CCCEEEEEEccccccCCCCCcCcccEEEEEEc
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS-------------DGKKMLLILSHNQESDGSTPVDSWDHLTFIDL  338 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-------------Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~  338 (790)
                      .|.++++.++.............   ....+.|+|             |++.|+ +.+    .+|        .|.++|+
T Consensus       126 ~i~v~d~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~----~dg--------~i~i~d~  189 (379)
T 3jrp_A          126 KVSVVEFKENGTTSPIIIDAHAI---GVNSASWAPATIEEDGEHNGTKESRKFV-TGG----ADN--------LVKIWKY  189 (379)
T ss_dssp             EEEEEECCTTSCCCEEEEECCTT---CEEEEEECCCC----------CTTCEEE-EEE----TTS--------CEEEEEE
T ss_pred             cEEEEecCCCCceeeEEecCCCC---ceEEEEEcCccccccccccCCCCCCEEE-EEe----CCC--------eEEEEEe
Confidence            38888888774332222111111   134789999             688776 554    455        5788887


Q ss_pred             CCCCcccCCCcccccCCCeEEeEEEeeecC---CCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecccccCCCccc
Q psy463          339 DDQAGIKDKVPVPLTRGRFTVTEILAWDEK---ENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDLLTSANQKCS  414 (790)
Q Consensus       339 ~~~~~~~~~~~~~lt~~~~~~~~~~~~s~d---g~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~  414 (790)
                      .+++... .....+..+...+.. ++|+|+   ++.|+..+.++.   ..||.+....  .. ...+..    .......
T Consensus       190 ~~~~~~~-~~~~~~~~h~~~v~~-~~~sp~~~~~~~l~s~~~dg~---i~iwd~~~~~--~~~~~~~~~----~~~~~~~  258 (379)
T 3jrp_A          190 NSDAQTY-VLESTLEGHSDWVRD-VAWSPTVLLRSYLASVSQDRT---CIIWTQDNEQ--GPWKKTLLK----EEKFPDV  258 (379)
T ss_dssp             ETTTTEE-EEEEEECCCSSCEEE-EEECCCCSSSEEEEEEETTSC---EEEEEESSTT--SCCEEEESS----SSCCSSC
T ss_pred             cCCCcce-eeEEEEecccCcEeE-EEECCCCCCCCeEEEEeCCCE---EEEEeCCCCC--ccceeeeec----cccCCCc
Confidence            6553000 001223333444444 899999   676666665543   5555543321  11 111111    1113456


Q ss_pred             EEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          415 YSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       415 ~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      +..+.|+|||++++.....   ..++++++.
T Consensus       259 v~~~~~s~~g~~l~~~~~d---g~i~iw~~~  286 (379)
T 3jrp_A          259 LWRASWSLSGNVLALSGGD---NKVTLWKEN  286 (379)
T ss_dssp             EEEEEECSSSCCEEEEESS---SSEEEEEEE
T ss_pred             EEEEEEcCCCCEEEEecCC---CcEEEEeCC
Confidence            7889999999988766442   335665553

>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...

Probab=98.63  E-value=7e-08  Score=106.08  Aligned_cols=133  Identities=19%  Similarity=0.240  Sum_probs=85.5

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      +...++.|..    ..+++|+||++|||+........... ....++++.|++|+.+|||... .|.-.........+..
T Consensus        93 l~lnv~~P~~----~~~~~Pv~v~iHGGg~~~g~~~~~~~-~~~~la~~~~~vvv~~nYRlg~-~Gf~~~~~~~~~~~n~  166 (529)
T 1p0i_A           93 LYLNVWIPAP----KPKNATVLIWIYGGGFQTGTSSLHVY-DGKFLARVERVIVVSMNYRVGA-LGFLALPGNPEAPGNM  166 (529)
T ss_dssp             CEEEEEEESS----CCSSEEEEEEECCSTTTSCCTTCGGG-CTHHHHHHHCCEEEEECCCCHH-HHHCCCTTCTTSCSCH
T ss_pred             CeEEEeeCCC----CCCCCeEEEEECCCccccCCCCcccc-ChHHHhccCCeEEEEecccccc-cccccCCCCCCCcCcc
Confidence            3445667864    23678999999999865332222111 1234444469999999999421 0100000000112234


Q ss_pred             chhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCCC
Q psy463          563 EIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVTD  621 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~~  621 (790)
                      .+.|+..+++|+.++..  ..|+++|.|+|+|.||.++..++.... ...|+++|+.+|...
T Consensus       167 gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~  228 (529)
T 1p0i_A          167 GLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN  228 (529)
T ss_dssp             HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred             cHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence            58899999999987521  268899999999999999988877431 247999999998653

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.62  E-value=1.1e-05  Score=84.58  Aligned_cols=77  Identities=17%  Similarity=0.136  Sum_probs=49.8

Q ss_pred             EEEEEEccCCcEEEEEecc-C------cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          249 LSRVNWANESVVAAWVNRV-Q------NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~-~------~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                      ...+.++|||+.++..... .      ....|+++|+++++...-.....      ....+.|||||+.++|..+   ..
T Consensus       269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~------~p~~i~~s~Dg~~~l~v~~---~~  339 (373)
T 2mad_H          269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH------DVDAISVAQDGGPDLYALS---AG  339 (373)
T ss_pred             eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC------CcCeEEECCCCCeEEEEEc---CC
Confidence            3346789999855543321 1      12469999999987743332221      1347999999996665554   12


Q ss_pred             CCCCCcCcccEEEEEEcCCCC
Q psy463          322 DGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~  342 (790)
                      +        ..|.++|+++++
T Consensus       340 ~--------~~V~ViD~~t~~  352 (373)
T 2mad_H          340 T--------EVLHIYDAGAGD  352 (373)
T ss_pred             C--------CeEEEEECCCCC
Confidence            3        379999999887

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=98.62  E-value=1.5e-05  Score=85.40  Aligned_cols=281  Identities=14%  Similarity=0.088  Sum_probs=155.4

Q ss_pred             eeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCC--CccccccCCCcceeEeeeecccceeEEEEee
Q psy463           12 ALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLRE--PVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        12 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      -+.||+++ .||.. . ++.  |+++.+..|+      ......+..  ..+..+.|++++..+.--..   .-.+.+++
T Consensus       110 ~l~wS~~n-~lAvg-l-d~t--V~lWd~~tg~------~~~~~~~~~~~~~V~sv~fspdg~~lasgs~---Dg~v~iWd  175 (420)
T 4gga_A          110 LVDWSSGN-VLAVA-L-DNS--VYLWSASSGD------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWD  175 (420)
T ss_dssp             CEEECTTS-EEEEE-E-TTE--EEEEETTTCC------EEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSCEEEEE
T ss_pred             eEEECCCC-EEEEE-e-CCE--EEEEECCCCC------EEEEEEecCCCCcEEEEEECCCCCEEEEEEC---CCeEEEEE
Confidence            47899875 67654 3 444  4555554453      111222222  23566788888775533222   23467788


Q ss_pred             CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463           90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF  169 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~  169 (790)
                      ..++++...+......       --.++++++.++- ...+            ..+++.+.....    .....+.....
T Consensus       176 ~~~~~~~~~~~~h~~~-------v~~~s~~~~~l~s-gs~d------------~~i~~~d~~~~~----~~~~~~~~h~~  231 (420)
T 4gga_A          176 VQQQKRLRNMTSHSAR-------VGSLSWNSYILSS-GSRS------------GHIHHHDVRVAE----HHVATLSGHSQ  231 (420)
T ss_dssp             TTTTEEEEEECCCSSC-------EEEEEEETTEEEE-EETT------------SEEEEEETTSSS----CEEEEEECCSS
T ss_pred             cCCCcEEEEEeCCCCc-------eEEEeeCCCEEEE-EeCC------------CceeEeeecccc----eeeEEeccccc
Confidence            8888766554433211       1245666765443 2222            267777765442    11122222222


Q ss_pred             EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEE
Q psy463          170 TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVL  249 (790)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~  249 (790)
                       ......+.+.+.  .+....           ....+.+.+..+++..... .....                 .....+
T Consensus       232 -~~~~~~~~~~g~--~l~s~~-----------~D~~v~i~~~~~~~~~~~~-~~~~~-----------------~~~~~V  279 (420)
T 4gga_A          232 -EVCGLRWAPDGR--HLASGG-----------NDNLVNVWPSAPGEGGWVP-LQTFT-----------------QHQGAV  279 (420)
T ss_dssp             -CEEEEEECTTSS--EEEEEE-----------TTSCEEEEESSCCSSCSCC-SEEEC-----------------CCSSCE
T ss_pred             -ceeeeeecCCCC--eeeeee-----------ccccceEEeecccccccee-eeeec-----------------ccCCce
Confidence             222334555544  222211           1146677777665421110 01111                 445667


Q ss_pred             EEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          250 SRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       250 ~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      ....|+|++. +++.... .....|.++|+.++++........      ......|+|+++.++....   ..+|     
T Consensus       280 ~~~~~~p~~~~~la~~~g-s~D~~I~iwd~~t~~~~~~~~~~~------~v~~~~~~~~~~~lv~~sg---~~d~-----  344 (420)
T 4gga_A          280 KAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGACLSAVDAHS------QVCSILWSPHYKELISGHG---FAQN-----  344 (420)
T ss_dssp             EEEEECTTCTTEEEEEEC-TTTCEEEEEETTTTEEEEEEECSS------CEEEEEEETTTTEEEEEEC---TTTC-----
T ss_pred             eeeeeCCCcccEEEEEee-cCCCEEEEEeCCccccceeecccc------ceeeeeecCCCCeEEEEEe---cCCC-----
Confidence            8899999988 5544332 222348899999998765554321      1347889999999884433   2344     


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~  389 (790)
                         .|.++|+.+++     ....|..+...+.. ++|+|||+.|+-.+.++.   ..||.+
T Consensus       345 ---~I~iwd~~~~~-----~v~~l~gH~~~V~~-l~~spdg~~l~S~s~D~t---vriWdv  393 (420)
T 4gga_A          345 ---QLVIWKYPTMA-----KVAELKGHTSRVLS-LTMSPDGATVASAAADET---LRLWRC  393 (420)
T ss_dssp             ---CEEEEETTTCC-----EEEEECCCSSCEEE-EEECTTSSCEEEEETTTE---EEEECC
T ss_pred             ---EEEEEECCCCc-----EEEEEcCCCCCEEE-EEEcCCCCEEEEEecCCe---EEEEEC
Confidence               68999998876     24556666656665 899999998876666643   566654

>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...

Probab=98.60  E-value=7.6e-08  Score=105.79  Aligned_cols=133  Identities=20%  Similarity=0.269  Sum_probs=85.9

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      +...++.|..    ..+++|+||++|||+........... ....++++.|++|+.+|||... .|.-.........+..
T Consensus        95 l~lnv~~P~~----~~~~~Pv~v~iHGG~~~~g~~~~~~~-~~~~la~~~~~vvv~~nYRlg~-~Gf~~~~~~~~~~~n~  168 (537)
T 1ea5_A           95 LYLNIWVPSP----RPKSTTVMVWIYGGGFYSGSSTLDVY-NGKYLAYTEEVVLVSLSYRVGA-FGFLALHGSQEAPGNV  168 (537)
T ss_dssp             CEEEEEECSS----CCSSEEEEEEECCSTTTCCCTTCGGG-CTHHHHHHHTCEEEECCCCCHH-HHHCCCTTCSSSCSCH
T ss_pred             CeEEEeccCC----CCCCCeEEEEECCCcccCCCCCCCcc-ChHHHHhcCCEEEEEeccCccc-cccccCCCCCCCcCcc
Confidence            3345567864    23678999999998875432222111 1234454679999999999421 0100000001112334


Q ss_pred             chhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCCC
Q psy463          563 EIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVTD  621 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~~  621 (790)
                      .+.|+..+++|+.++..  ..|+++|.|+|+|.||.++..++.... ...|+++|+.+|...
T Consensus       169 gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~  230 (537)
T 1ea5_A          169 GLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN  230 (537)
T ss_dssp             HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred             ccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence            58999999999987521  268999999999999999988776421 247999999998653

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=98.60  E-value=4.3e-06  Score=94.69  Aligned_cols=250  Identities=10%  Similarity=0.055  Sum_probs=143.1

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeec--cCCccEEEEec
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE--RENNPLLILSH  190 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~--~~~~~~~~~~~  190 (790)
                      ...|||||+.|++..  +            +.|.+++++++.... +....+.........-+.|++  +++  .++...
T Consensus        23 ~~~~spdg~~l~~~~--~------------~~v~v~~~~~~~~~~-~~~~~~~~h~~~~v~~~~~sp~~~~~--~l~s~~   85 (615)
T 1pgu_A           23 HLSYDPTTNAIAYPC--G------------KSAFVRCLDDGDSKV-PPVVQFTGHGSSVVTTVKFSPIKGSQ--YLCSGD   85 (615)
T ss_dssp             CCEEETTTTEEEEEE--T------------TEEEEEECCSSCCSS-CSEEEECTTTTSCEEEEEECSSTTCC--EEEEEE
T ss_pred             EEEECCCCCEEEEec--C------------CeEEEEECCCCCCcc-ccceEEecCCCceEEEEEECcCCCCC--EEEEec
Confidence            468999999999866  1            178888887651000 123344444333033346777  554  333322


Q ss_pred             ccCCCCCCCccccceeEEEecCCc------ccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE
Q psy463          191 NQESDGSTPVDSWDHLTFIDLDDQ------AGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV  264 (790)
Q Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~  264 (790)
                      .           ...|.+.++.++      +.+.   ...+.                 .....+..+.|+|||+.++..
T Consensus        86 ~-----------dg~v~vw~~~~~~~~~~~~~~~---~~~~~-----------------~~~~~v~~~~~s~~~~~l~~~  134 (615)
T 1pgu_A           86 E-----------SGKVIVWGWTFDKESNSVEVNV---KSEFQ-----------------VLAGPISDISWDFEGRRLCVV  134 (615)
T ss_dssp             T-----------TSEEEEEEEEEEGGGTEEEEEE---EEEEE-----------------CCSSCEEEEEECTTSSEEEEE
T ss_pred             C-----------CCEEEEEeCCCCcccccccccc---cchhh-----------------cccccEEEEEEeCCCCEEEEe
Confidence            1           146777777544      1100   11122                 345668899999999955554


Q ss_pred             ecc-CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCc
Q psy463          265 NRV-QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG  343 (790)
Q Consensus       265 ~r~-~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~  343 (790)
                      ..+ .....|++++  .++......  ....   ......|+|||+.++++.+    .+|        .|.++|+.+++ 
T Consensus       135 ~~~~~~~~~v~~~d--~~~~~~~~~--~~~~---~v~~~~~~~~~~~~l~~~~----~d~--------~v~vwd~~~~~-  194 (615)
T 1pgu_A          135 GEGRDNFGVFISWD--SGNSLGEVS--GHSQ---RINACHLKQSRPMRSMTVG----DDG--------SVVFYQGPPFK-  194 (615)
T ss_dssp             ECCSSCSEEEEETT--TCCEEEECC--SCSS---CEEEEEECSSSSCEEEEEE----TTT--------EEEEEETTTBE-
T ss_pred             ccCCCCccEEEEEE--CCCcceeee--cCCc---cEEEEEECCCCCcEEEEEe----CCC--------cEEEEeCCCcc-
Confidence            432 2234466666  443322221  1111   2347899999995544555    455        78899988765 


Q ss_pred             ccCCCcccccCCCe---EEeEEEeeecC-CCEEEEEEcCCCCceEEEEEEEcCCCCCCcc-eeeecccccCCCcccEEEE
Q psy463          344 IKDKVPVPLTRGRF---TVTEILAWDEK-ENNVYFLSTQGSPIVQHMYRINIADPTATPE-CITCDLLTSANQKCSYSGA  418 (790)
Q Consensus       344 ~~~~~~~~lt~~~~---~~~~~~~~s~d-g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~  418 (790)
                          ....+.....   .+.. +.|+|+ ++.|+..+.+     ..|+..++..  ++.. .+...   .......+..+
T Consensus       195 ----~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~d-----g~i~vwd~~~--~~~~~~~~~~---~~~~~~~v~~~  259 (615)
T 1pgu_A          195 ----FSASDRTHHKQGSFVRD-VEFSPDSGEFVITVGSD-----RKISCFDGKS--GEFLKYIEDD---QEPVQGGIFAL  259 (615)
T ss_dssp             ----EEEEECSSSCTTCCEEE-EEECSTTCCEEEEEETT-----CCEEEEETTT--CCEEEECCBT---TBCCCSCEEEE
T ss_pred             ----eeeeecccCCCCceEEE-EEECCCCCCEEEEEeCC-----CeEEEEECCC--CCEeEEeccc---ccccCCceEEE
Confidence                1333443333   4544 889999 8877777665     3566667655  3322 22010   00145678889


Q ss_pred             EEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          419 TFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       419 ~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      .|+ ++++++.....   ..+.++++.+++.
T Consensus       260 ~~~-~~~~l~~~~~d---~~i~~wd~~~~~~  286 (615)
T 1pgu_A          260 SWL-DSQKFATVGAD---ATIRVWDVTTSKC  286 (615)
T ss_dssp             EES-SSSEEEEEETT---SEEEEEETTTTEE
T ss_pred             EEc-CCCEEEEEcCC---CcEEEEECCCCcE
Confidence            999 99888665432   4688889876543

>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18

Probab=98.60  E-value=1.4e-07  Score=95.15  Aligned_cols=105  Identities=10%  Similarity=-0.047  Sum_probs=72.0

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|.||++||..+.......+........++++||.|+.+|++|.+...             ...+++.+.++.+++.. 
T Consensus         6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~-------------~~~~~~~~~i~~~~~~~-   71 (285)
T 1ex9_A            6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-------------VRGEQLLQQVEEIVALS-   71 (285)
T ss_dssp             CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-------------HHHHHHHHHHHHHHHHH-
T ss_pred             CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch-------------hhHHHHHHHHHHHHHHh-
Confidence            4577999999877531111112223344555589999999999866432             12445555555555532 


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                        +..++.++||||||.++..++.++|. .++.++.+++...
T Consensus        72 --~~~~v~lvGhS~GG~~a~~~a~~~p~-~v~~lv~i~~p~~  110 (285)
T 1ex9_A           72 --GQPKVNLIGHSHGGPTIRYVAAVRPD-LIASATSVGAPHK  110 (285)
T ss_dssp             --CCSCEEEEEETTHHHHHHHHHHHCGG-GEEEEEEESCCTT
T ss_pred             --CCCCEEEEEECHhHHHHHHHHHhChh-heeEEEEECCCCC
Confidence              34789999999999999999998875 8999998888543

>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19

Probab=98.59  E-value=7.3e-08  Score=102.52  Aligned_cols=112  Identities=13%  Similarity=0.044  Sum_probs=74.6

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|+||++||..+..  ...|.......++++.+|.|+++|++|++.+...  .+... . ....+++.+.++++.++.+
T Consensus        68 ~~p~vvliHG~~~s~--~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~--~~~~~-~-~~v~~~la~ll~~L~~~~g  141 (449)
T 1hpl_A           68 GRKTRFIIHGFIDKG--EESWLSTMCQNMFKVESVNCICVDWKSGSRTAYS--QASQN-V-RIVGAEVAYLVGVLQSSFD  141 (449)
T ss_dssp             TSEEEEEECCCCCTT--CTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHH--HHHHH-H-HHHHHHHHHHHHHHHHHHC
T ss_pred             CCCeEEEEecCCCCC--CccHHHHHHHHHHhcCCeEEEEEeCCcccCCccH--HHHHH-H-HHHHHHHHHHHHHHHHhcC
Confidence            458899999987652  1234433344555556899999999987653311  11100 0 0123456666777653233


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                       ++.+++.|+||||||.+|..++.++|. +++.+++..|.
T Consensus       142 -~~~~~v~LIGhSlGg~vA~~~a~~~p~-~v~~iv~Ldpa  179 (449)
T 1hpl_A          142 -YSPSNVHIIGHSLGSHAAGEAGRRTNG-AVGRITGLDPA  179 (449)
T ss_dssp             -CCGGGEEEEEETHHHHHHHHHHHHTTT-CSSEEEEESCB
T ss_pred             -CCcccEEEEEECHhHHHHHHHHHhcch-hcceeeccCcc
Confidence             456899999999999999999999885 78888877764

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=98.59  E-value=6.5e-06  Score=94.83  Aligned_cols=248  Identities=12%  Similarity=0.094  Sum_probs=142.1

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+|++..++.+.+.++            .|.++++.............++.+...+.. ..++++++  ++....   
T Consensus       388 v~~~~~~~~~l~s~s~D~------------~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~-v~~s~~g~--~l~sgs---  449 (694)
T 3dm0_A          388 IATPIDNADIIVSASRDK------------SIILWKLTKDDKAYGVAQRRLTGHSHFVED-VVLSSDGQ--FALSGS---  449 (694)
T ss_dssp             EECCTTCCSEEEEEETTS------------EEEEEECCCSTTCSCEEEEEEECCSSCEEE-EEECTTSS--EEEEEE---
T ss_pred             EEecCCCCCEEEEEeCCC------------cEEEEEccCCCcccccccceecCCCCcEEE-EEECCCCC--EEEEEe---
Confidence            478888877776665444            677777765421000112233444333433 35666554  222221   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                              ....|.+.|+.++..     ...+.                 .....+..+.|||||+.++....+..   |
T Consensus       450 --------~Dg~v~vwd~~~~~~-----~~~~~-----------------~h~~~v~~~~~s~~~~~l~s~s~D~~---i  496 (694)
T 3dm0_A          450 --------WDGELRLWDLAAGVS-----TRRFV-----------------GHTKDVLSVAFSLDNRQIVSASRDRT---I  496 (694)
T ss_dssp             --------TTSEEEEEETTTTEE-----EEEEE-----------------CCSSCEEEEEECTTSSCEEEEETTSC---E
T ss_pred             --------CCCcEEEEECCCCcc-----eeEEe-----------------CCCCCEEEEEEeCCCCEEEEEeCCCE---E
Confidence                    125788888887653     12222                 44566889999999995555444332   7


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCE-EEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKK-MLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~-i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      .+.+..+.....+... . .+.........|+|++.. ++++.+    .+|        .|.++|+.+++     ....+
T Consensus       497 ~iwd~~~~~~~~~~~~-~-~~h~~~v~~~~~~~~~~~~~l~s~s----~d~--------~v~vwd~~~~~-----~~~~~  557 (694)
T 3dm0_A          497 KLWNTLGECKYTISEG-G-EGHRDWVSCVRFSPNTLQPTIVSAS----WDK--------TVKVWNLSNCK-----LRSTL  557 (694)
T ss_dssp             EEECTTSCEEEEECSS-T-TSCSSCEEEEEECSCSSSCEEEEEE----TTS--------CEEEEETTTCC-----EEEEE
T ss_pred             EEEECCCCcceeeccC-C-CCCCCcEEEEEEeCCCCcceEEEEe----CCC--------eEEEEECCCCc-----EEEEE
Confidence            7777755433322211 1 111111346889999842 333555    455        58889988776     13345


Q ss_pred             cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          353 TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      ..+...+.. ++|+|||+.|+..+.++     .|...++..  ++  ++.. +   . ....+..+.|||++.+++...+
T Consensus       558 ~~h~~~v~~-v~~spdg~~l~sg~~Dg-----~i~iwd~~~--~~--~~~~-~---~-~~~~v~~~~~sp~~~~l~~~~~  622 (694)
T 3dm0_A          558 AGHTGYVST-VAVSPDGSLCASGGKDG-----VVLLWDLAE--GK--KLYS-L---E-ANSVIHALCFSPNRYWLCAATE  622 (694)
T ss_dssp             CCCSSCEEE-EEECTTSSEEEEEETTS-----BCEEEETTT--TE--EEEC-C---B-CSSCEEEEEECSSSSEEEEEET
T ss_pred             cCCCCCEEE-EEEeCCCCEEEEEeCCC-----eEEEEECCC--Cc--eEEE-e---c-CCCcEEEEEEcCCCcEEEEEcC
Confidence            544444554 89999999877766663     445556654  22  2221 0   0 2346788999999988765532


Q ss_pred             cCCCCeEEEEecCCCeEE
Q psy463          433 GPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       433 ~~~~~~i~~~~~~~~~~~  450 (790)
                          ..|.++|+.+++..
T Consensus       623 ----~~i~iwd~~~~~~~  636 (694)
T 3dm0_A          623 ----HGIKIWDLESKSIV  636 (694)
T ss_dssp             ----TEEEEEETTTTEEE
T ss_pred             ----CCEEEEECCCCCCh
Confidence                34899999876543

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=98.59  E-value=1.7e-05  Score=84.39  Aligned_cols=223  Identities=11%  Similarity=0.094  Sum_probs=131.8

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|+++++.++.     ....+.........-+.|+++++  .++....           ...|.++++.+++.     ..
T Consensus       114 ~v~lw~~~~~~-----~~~~~~~~~~~~v~~v~~s~~~~--~l~~~~~-----------dg~i~iwd~~~~~~-----~~  170 (401)
T 4aez_A          114 NVYVWNADSGS-----VSALAETDESTYVASVKWSHDGS--FLSVGLG-----------NGLVDIYDVESQTK-----LR  170 (401)
T ss_dssp             EEEEEETTTCC-----EEEEEECCTTCCEEEEEECTTSS--EEEEEET-----------TSCEEEEETTTCCE-----EE
T ss_pred             eEEEeeCCCCc-----EeEeeecCCCCCEEEEEECCCCC--EEEEECC-----------CCeEEEEECcCCeE-----EE
Confidence            79999998874     22222221122233346777654  3333221           15788888877653     12


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCC-ceeEEEEEeCCCcccccCCce
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEG-TCDVVFSRDLDRGWFEPFDHL  302 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~  302 (790)
                      .+.                 .....+..+.|  +++.++....+.   .|.++|+... .........  .+   .....
T Consensus       171 ~~~-----------------~~~~~v~~~~~--~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~--~~---~v~~~  223 (401)
T 4aez_A          171 TMA-----------------GHQARVGCLSW--NRHVLSSGSRSG---AIHHHDVRIANHQIGTLQGH--SS---EVCGL  223 (401)
T ss_dssp             EEC-----------------CCSSCEEEEEE--ETTEEEEEETTS---EEEEEETTSSSCEEEEEECC--SS---CEEEE
T ss_pred             Eec-----------------CCCCceEEEEE--CCCEEEEEcCCC---CEEEEecccCcceeeEEcCC--CC---CeeEE
Confidence            222                 34556778888  566555554432   3888888843 332222211  11   14478


Q ss_pred             eEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC-CCC
Q psy463          303 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ-GSP  381 (790)
Q Consensus       303 ~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~-~~~  381 (790)
                      .|+|||+.|+ +.+    .+|        .|.++|+.+++     ....+......+.. +.|+|+++.++..+.. .. 
T Consensus       224 ~~~~~~~~l~-s~~----~d~--------~v~iwd~~~~~-----~~~~~~~~~~~v~~-~~~~p~~~~ll~~~~gs~d-  283 (401)
T 4aez_A          224 AWRSDGLQLA-SGG----NDN--------VVQIWDARSSI-----PKFTKTNHNAAVKA-VAWCPWQSNLLATGGGTMD-  283 (401)
T ss_dssp             EECTTSSEEE-EEE----TTS--------CEEEEETTCSS-----EEEEECCCSSCCCE-EEECTTSTTEEEEECCTTT-
T ss_pred             EEcCCCCEEE-EEe----CCC--------eEEEccCCCCC-----ccEEecCCcceEEE-EEECCCCCCEEEEecCCCC-
Confidence            9999999887 554    455        68899998765     13334444444444 8899999878777642 12 


Q ss_pred             ceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463          382 IVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       382 ~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                        ..|...++..  ++......       ....+..+.|+|++++++.... .....+.++++.+++
T Consensus       284 --~~i~i~d~~~--~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~g-~~dg~i~v~~~~~~~  338 (401)
T 4aez_A          284 --KQIHFWNAAT--GARVNTVD-------AGSQVTSLIWSPHSKEIMSTHG-FPDNNLSIWSYSSSG  338 (401)
T ss_dssp             --CEEEEEETTT--CCEEEEEE-------CSSCEEEEEECSSSSEEEEEEC-TTTCEEEEEEEETTE
T ss_pred             --CEEEEEECCC--CCEEEEEe-------CCCcEEEEEECCCCCeEEEEee-cCCCcEEEEecCCcc
Confidence              5677778765  33222221       2346788999999998876542 224568888876543

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=98.58  E-value=1.2e-05  Score=82.50  Aligned_cols=175  Identities=11%  Similarity=0.124  Sum_probs=106.7

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|.+.|+.+++.     ...+.                 .....+..+.|+|+|+.++....+..   |.+.++.+...
T Consensus        87 ~~v~~wd~~~~~~-----~~~~~-----------------~h~~~v~~~~~~~~~~~l~s~s~D~~---i~vwd~~~~~~  141 (319)
T 3frx_A           87 KTLRLWDVATGET-----YQRFV-----------------GHKSDVMSVDIDKKASMIISGSRDKT---IKVWTIKGQCL  141 (319)
T ss_dssp             SEEEEEETTTTEE-----EEEEE-----------------CCSSCEEEEEECTTSCEEEEEETTSC---EEEEETTSCEE
T ss_pred             CEEEEEECCCCCe-----eEEEc-----------------cCCCcEEEEEEcCCCCEEEEEeCCCe---EEEEECCCCeE
Confidence            5788888887753     12222                 44566889999999996666554432   77788865543


Q ss_pred             eEEEEEeCCCcccccCCceeEccCC------CEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCe
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDG------KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF  357 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg------~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~  357 (790)
                      ..+.   +...+   .....|+|++      ..|+ ..+    .++        .|.++|+.+.+     ....+..+..
T Consensus       142 ~~~~---~h~~~---v~~~~~~~~~~~~~~~~~l~-s~~----~d~--------~i~~wd~~~~~-----~~~~~~~h~~  197 (319)
T 3frx_A          142 ATLL---GHNDW---VSQVRVVPNEKADDDSVTII-SAG----NDK--------MVKAWNLNQFQ-----IEADFIGHNS  197 (319)
T ss_dssp             EEEC---CCSSC---EEEEEECCC------CCEEE-EEE----TTS--------CEEEEETTTTE-----EEEEECCCCS
T ss_pred             EEEe---ccCCc---EEEEEEccCCCCCCCccEEE-EEe----CCC--------EEEEEECCcch-----hheeecCCCC
Confidence            3332   11222   2356777754      3454 554    455        58888987665     1333444444


Q ss_pred             EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCC
Q psy463          358 TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGI  436 (790)
Q Consensus       358 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~  436 (790)
                      .+.. ++|+|||+.|+-.+.+     ..|...++..  ++. ..+.        ....+..+.|||++.+++....    
T Consensus       198 ~v~~-~~~sp~g~~l~s~~~d-----g~i~iwd~~~--~~~~~~~~--------~~~~v~~~~~sp~~~~la~~~~----  257 (319)
T 3frx_A          198 NINT-LTASPDGTLIASAGKD-----GEIMLWNLAA--KKAMYTLS--------AQDEVFSLAFSPNRYWLAAATA----  257 (319)
T ss_dssp             CEEE-EEECTTSSEEEEEETT-----CEEEEEETTT--TEEEEEEE--------CCSCEEEEEECSSSSEEEEEET----
T ss_pred             cEEE-EEEcCCCCEEEEEeCC-----CeEEEEECCC--CcEEEEec--------CCCcEEEEEEcCCCCEEEEEcC----
Confidence            4554 8899999987776665     4566667655  322 1121        2346788999999998876542    


Q ss_pred             CeEEEEecCCC
Q psy463          437 PEIMLFDKTGQ  447 (790)
Q Consensus       437 ~~i~~~~~~~~  447 (790)
                      ..+.+++++.+
T Consensus       258 ~~i~v~~~~~~  268 (319)
T 3frx_A          258 TGIKVFSLDPQ  268 (319)
T ss_dssp             TEEEEEEETTE
T ss_pred             CCcEEEEeCcC
Confidence            23666666654

>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A

Probab=98.58  E-value=8.6e-08  Score=102.02  Aligned_cols=112  Identities=15%  Similarity=0.108  Sum_probs=72.9

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|+||++||..+..  ...|.......+++..+|.|+++|++|++.....  .....  .....+++.+.++++.++.+
T Consensus        69 ~~p~vvliHG~~~s~--~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~--~~~~~--~~~~a~~l~~ll~~L~~~~g  142 (450)
T 1rp1_A           69 DKKTRFIIHGFIDKG--EENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYT--QAANN--VRVVGAQVAQMLSMLSANYS  142 (450)
T ss_dssp             TSEEEEEECCCCCTT--CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHH--HHHHH--HHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCeEEEEccCCCCC--CcchHHHHHHHHHhcCCeEEEEEeCccccCCcch--HHHHH--HHHHHHHHHHHHHHHHHhcC
Confidence            458999999987652  1234332333455545899999999985543211  11100  00124556666666653233


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                       ++.+++.|+||||||.+|..++.++|.  ++.+++..|..
T Consensus       143 -~~~~~v~LVGhSlGg~vA~~~a~~~p~--v~~iv~Ldpa~  180 (450)
T 1rp1_A          143 -YSPSQVQLIGHSLGAHVAGEAGSRTPG--LGRITGLDPVE  180 (450)
T ss_dssp             -CCGGGEEEEEETHHHHHHHHHHHTSTT--CCEEEEESCCC
T ss_pred             -CChhhEEEEEECHhHHHHHHHHHhcCC--cccccccCccc
Confidence             456899999999999999999998875  88888777643

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=98.57  E-value=7.9e-06  Score=82.93  Aligned_cols=109  Identities=13%  Similarity=0.175  Sum_probs=68.3

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECC-CCce---eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSIN-EGTC---DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~-~g~~---~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ....++|+|||+.+ +++...+  .|++++++ +|..   ..++ ... .   .....+.+++||+ |+ ++.     .+
T Consensus       173 ~~~gi~~s~dg~~l-v~~~~~~--~i~~~~~~~~g~~~~~~~~~-~~~-~---~~p~~i~~d~~G~-l~-v~~-----~~  237 (296)
T 3e5z_A          173 KPNGLAFLPSGNLL-VSDTGDN--ATHRYCLNARGETEYQGVHF-TVE-P---GKTDGLRVDAGGL-IW-ASA-----GD  237 (296)
T ss_dssp             SEEEEEECTTSCEE-EEETTTT--EEEEEEECSSSCEEEEEEEE-CCS-S---SCCCSEEEBTTSC-EE-EEE-----TT
T ss_pred             CCccEEECCCCCEE-EEeCCCC--eEEEEEECCCCcCcCCCeEe-eCC-C---CCCCeEEECCCCC-EE-EEc-----CC
Confidence            34578999999976 6654332  48888876 5654   2333 211 1   1134789999997 44 222     23


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEee-ecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW-DEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                              .|++++.++..      ...+..... +.. +.+ +||++.||+.+..      .||+++.++
T Consensus       238 --------~v~~~~~~g~~------~~~~~~~~~-~~~-~~f~~~d~~~L~v~t~~------~l~~~~~~~  286 (296)
T 3e5z_A          238 --------GVHVLTPDGDE------LGRVLTPQT-TSN-LCFGGPEGRTLYMTVST------EFWSIETNV  286 (296)
T ss_dssp             --------EEEEECTTSCE------EEEEECSSC-CCE-EEEESTTSCEEEEEETT------EEEEEECSC
T ss_pred             --------eEEEECCCCCE------EEEEECCCC-cee-EEEECCCCCEEEEEcCC------eEEEEEccc
Confidence                    58999987443      444443333 333 667 5899988888754      689998876

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=98.56  E-value=1.2e-05  Score=86.61  Aligned_cols=210  Identities=12%  Similarity=0.140  Sum_probs=109.8

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCc--ceeccccceEEEEEEeeeccCCccEEEEec
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV--PVPLTRGRFTVTEILAWDERENNPLLILSH  190 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~  190 (790)
                      ...|+|+++.++++...++            .|.++++..+.......  ...+......+. -..|++.++.  +|++.
T Consensus       186 ~l~~~~~~~~~l~s~~~dg------------~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~--~l~s~  250 (430)
T 2xyi_A          186 GLSWNPNLNGYLLSASDDH------------TICLWDINATPKEHRVIDAKNIFTGHTAVVE-DVAWHLLHES--LFGSV  250 (430)
T ss_dssp             CEEECTTSTTEEEEECTTS------------CEEEEETTSCCBGGGEEECSEEECCCSSCEE-EEEECSSCTT--EEEEE
T ss_pred             EEEeCCCCCCeEEEEeCCC------------eEEEEeCCCCCCCCceeccceeecCCCCCEe-eeEEeCCCCC--EEEEE
Confidence            3478999985454443332            68888887642100000  111222222233 3466664443  33332


Q ss_pred             ccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCc
Q psy463          191 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQN  269 (790)
Q Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~  269 (790)
                      .          ....|.++|+.++...+.  ...+.                 .....+..+.|+|+|+ +++....+. 
T Consensus       251 ~----------~dg~i~i~d~~~~~~~~~--~~~~~-----------------~~~~~v~~i~~~p~~~~~l~tg~~dg-  300 (430)
T 2xyi_A          251 A----------DDQKLMIWDTRNNNTSKP--SHTVD-----------------AHTAEVNCLSFNPYSEFILATGSADK-  300 (430)
T ss_dssp             E----------TTSEEEEEETTCSCSSSC--SEEEE-----------------CCSSCEEEEEECSSCTTEEEEEETTS-
T ss_pred             e----------CCCeEEEEECCCCCCCcc--eeEee-----------------cCCCCeEEEEeCCCCCCEEEEEeCCC-
Confidence            1          126888889886531111  11222                 3455688999999998 555544332 


Q ss_pred             ceEEEEEECCCC-ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccC--
Q psy463          270 RARITRCSINEG-TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD--  346 (790)
Q Consensus       270 ~~~i~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~--  346 (790)
                        .|.++|+.+. .+...+...  ..   ......|+|+|+.++++.+    .+|        .|.++|+........  
T Consensus       301 --~v~vwd~~~~~~~~~~~~~h--~~---~v~~i~~sp~~~~~l~s~~----~d~--------~i~iwd~~~~~~~~~~~  361 (430)
T 2xyi_A          301 --TVALWDLRNLKLKLHSFESH--KD---EIFQVQWSPHNETILASSG----TDR--------RLHVWDLSKIGEEQSTE  361 (430)
T ss_dssp             --EEEEEETTCTTSCSEEEECC--SS---CEEEEEECSSCTTEEEEEE----TTS--------CCEEEEGGGTTCCCCHH
T ss_pred             --eEEEEeCCCCCCCeEEeecC--CC---CEEEEEECCCCCCEEEEEe----CCC--------cEEEEeCCCCccccCcc
Confidence              3888998873 333333211  11   1447899999987665555    455        577888764210000  


Q ss_pred             -------CCcccccCCCeEEeEEEeeecCCCEEEEEEc-CCCCceEEEEEEE
Q psy463          347 -------KVPVPLTRGRFTVTEILAWDEKENNVYFLST-QGSPIVQHMYRIN  390 (790)
Q Consensus       347 -------~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~~~~l~~~~  390 (790)
                             .....+..+...+.. ++|+|+++.+++.+. ++.   .+||.++
T Consensus       362 ~~~~~~~~~~~~~~~h~~~v~~-~~~~p~~~~~l~s~s~dg~---i~iw~~~  409 (430)
T 2xyi_A          362 DAEDGPPELLFIHGGHTAKISD-FSWNPNEPWIICSVSEDNI---MQVWQMA  409 (430)
T ss_dssp             HHHHCCTTEEEECCCCSSCEEE-EEECSSSTTEEEEEETTSE---EEEEEEC
T ss_pred             ccccCCcceEEEcCCCCCCceE-EEECCCCCCEEEEEECCCC---EEEeEcc
Confidence                   001112222333444 899999994444444 332   5666654

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.56  E-value=4.4e-05  Score=80.53  Aligned_cols=302  Identities=8%  Similarity=0.054  Sum_probs=151.8

Q ss_pred             CCCCceEEEEecCC-c--eeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeec-------ccceeEEE
Q psy463           17 PSGNNLAYASFDDN-R--TVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNR-------VQNRARIT   86 (790)
Q Consensus        17 PDG~~iaf~~~~~~-~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r-------~~~~~~~~   86 (790)
                      ||+++ +|++.... .  ..+.++...-.+      ....+..... . .+..++|++.++-.+.       +...-.++
T Consensus        82 ~~~~~-vyV~n~~~~~~~~~VsVID~~t~~------vv~~I~vG~~-P-gia~SpDgk~lyVan~~~~~~~~G~~~~~Vs  152 (426)
T 3c75_H           82 PDARR-VYIQDPAHFAAITQQFVIDGSTGR------ILGMTDGGFL-P-HPVAAEDGSFFAQASTVFERIARGKRTDYVE  152 (426)
T ss_dssp             CCTTE-EEEEECTTTCSSEEEEEEETTTTE------EEEEEEECSS-C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred             CCCCE-EEEECCCcCCCCCeEEEEECCCCE------EEEEEECCCC-C-ceEECCCCCEEEEEeccccccccCCCCCEEE
Confidence            78876 56665422 1  467777765442      1111111111 1 3556677775543332       12344678


Q ss_pred             EeeCCCCeeeEEEeecCCCCc-cc-cCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceec
Q psy463           87 RCSINEGTCDVVFSRDLDRGW-FE-PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  164 (790)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~l  164 (790)
                      ++|..+++...-+.......+ .+ .+....+||||+++|..+....           +.|.++|+.+.+     +...+
T Consensus       153 viD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~-----------~~VsVID~~t~k-----vv~~I  216 (426)
T 3c75_H          153 VFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPA-----------PAVGVVDLEGKT-----FDRML  216 (426)
T ss_dssp             EECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSS-----------CEEEEEETTTTE-----EEEEE
T ss_pred             EEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCC-----------CeEEEEECCCCe-----EEEEE
Confidence            888888765543332211111 11 1234689999999887663211           279999998874     33334


Q ss_pred             cccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCC
Q psy463          165 TRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENN  244 (790)
Q Consensus       165 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~  244 (790)
                      .-+..     ....+.++.  .|+.....          ..+..+++.+++...... ..+.                ..
T Consensus       217 ~v~g~-----~~~~p~g~~--~~v~~~~d----------G~~~~V~~~~~~v~~~~~-~~~~----------------v~  262 (426)
T 3c75_H          217 DVPDC-----YHIFPASPT--VFYMNCRD----------GSLARVDFADGETKVTNT-EVFH----------------TE  262 (426)
T ss_dssp             ECCSE-----EEEEEEETT--EEEEEETT----------SSEEEEECCTTCCEEEEC-CCCS----------------CT
T ss_pred             EcCCc-----eeeccCCCc--EEEEEcCC----------CCEEEEECCCCcEEEEee-eeec----------------cC
Confidence            33221     111222221  22222211          345555554443210000 0000                01


Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeC------CCccc-ccCCceeEccCCCEEEEEEcc
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDL------DRGWF-EPFDHLRFSSDGKKMLLILSH  317 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~------~~~~~-~~~~~~~~spDg~~i~~~~~~  317 (790)
                      .......+.+++||+.+++++..   ..++++|..++..+.+.....      ..+|. .......++|||+++|+....
T Consensus       263 ~~p~~~~~~~~~dg~~~~~~s~~---g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~  339 (426)
T 3c75_H          263 DELLINHPAFSLRSGRLVWPTYT---GKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQ  339 (426)
T ss_dssp             TSCBCSCCEECTTTCEEEEEBTT---SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEE
T ss_pred             CCceeeEeeecCCCCEEEEEeCC---CcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecc
Confidence            11111235689999955555543   259999987765443221110      01121 012247899999999855431


Q ss_pred             ccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          318 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       318 ~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                        ...|.+ -..-..|.++|+.+.+     ....|.-+. . ...+.++|||+.++|.++...   ..|.++|+.+
T Consensus       340 --~~~gth-k~~s~~VsVID~~T~k-----vv~~I~vg~-~-P~gia~spDg~~~lyv~n~~s---~~VsVID~~t  402 (426)
T 3c75_H          340 --RDEWKH-KAASRFVVVLNAETGE-----RINKIELGH-E-IDSINVSQDAEPLLYALSAGT---QTLHIYDAAT  402 (426)
T ss_dssp             --CCTTCT-TSCEEEEEEEETTTCC-----EEEEEEEEE-E-ECEEEECCSSSCEEEEEETTT---TEEEEEETTT
T ss_pred             --cccccc-cCCCCEEEEEECCCCe-----EEEEEECCC-C-cCeEEEccCCCEEEEEEcCCC---CeEEEEECCC
Confidence              011100 0003479999998877     233443222 1 223789999995556666533   5899999977

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=98.55  E-value=4.5e-05  Score=77.89  Aligned_cols=281  Identities=14%  Similarity=0.090  Sum_probs=149.3

Q ss_pred             ceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCC--ccccccCCCcceeEeeeecccceeEEEEe
Q psy463           11 SALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREP--VLSRVNWANESVVAAWVNRVQNRARITRC   88 (790)
Q Consensus        11 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~w~~~~~~~~~~~r~~~~~~~~~~   88 (790)
                      ..+.||||+ .||...  ++.+.+|.  ...|+      .....++..+  .+..+.|++++..+.--..   .-.+.++
T Consensus        29 ~~l~WS~~~-~lAvg~--D~tV~iWd--~~tg~------~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~---Dg~v~iw   94 (318)
T 4ggc_A           29 NLVDWSSGN-VLAVAL--DNSVYLWS--ASSGD------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLW   94 (318)
T ss_dssp             BCEEECTTS-EEEEEE--TTEEEEEE--TTTCC------EEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSEEEEE
T ss_pred             eEEEECCCC-EEEEEe--CCEEEEEE--CCCCC------EEEEEEecCCCCeEEEEEECCCCCEEEEEEC---CCcEEEe
Confidence            357899997 677543  45555554  43342      1112222222  2455677777665433222   2356778


Q ss_pred             eCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc
Q psy463           89 SINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR  168 (790)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~  168 (790)
                      +..++++...+......       .-.++++++.++-.+ ..            ..+...+.....    .....+... 
T Consensus        95 ~~~~~~~~~~~~~h~~~-------~~~~~~~~~~l~s~~-~~------------~~~~~~~~~~~~----~~~~~~~~~-  149 (318)
T 4ggc_A           95 DVQQQKRLRNMTSHSAR-------VGSLSWNSYILSSGS-RS------------GHIHHHDVRVAE----HHVATLSGH-  149 (318)
T ss_dssp             ETTTTEEEEEEECCSSC-------EEEEEEETTEEEEEE-TT------------SEEEEEETTSSS----CEEEEEECC-
T ss_pred             ecCCceeEEEecCccce-------EEEeecCCCEEEEEe-cC------------CceEeeecCCCc----eeEEEEcCc-
Confidence            88888766554433211       124566666544322 11            145555544432    011111111 


Q ss_pred             eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463          169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV  248 (790)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~  248 (790)
                      ........+.+.+.  .++...           ....|.+.|+.+++..... .....                 .....
T Consensus       150 ~~~~~~~~~~~~~~--~l~s~~-----------~d~~i~iwd~~~~~~~~~~-~~~~~-----------------~~~~~  198 (318)
T 4ggc_A          150 SQEVCGLRWAPDGR--HLASGG-----------NDNLVNVWPSAPGEGGWVP-LQTFT-----------------QHQGA  198 (318)
T ss_dssp             SSCEEEEEECTTSS--EEEEEE-----------TTSCEEEEESSCBTTBSCC-SEEEC-----------------CCCSC
T ss_pred             cCceEEEEEcCCCC--EEEEEe-----------cCcceeEEECCCCcccccc-eeeec-----------------ccCCc
Confidence            12222334444443  222211           1146777788776532110 00111                 34456


Q ss_pred             EEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          249 LSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       249 ~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      +....|+|++. .+.... +.....|.+.+...+..........      ......|+|+++.++....   ..+|    
T Consensus       199 v~~~~~~~~~~~~~~~~~-~~~~~~i~lwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~~sg---~~d~----  264 (318)
T 4ggc_A          199 VKAVAWCPWQSNVLATGG-GTSDRHIRIWNVCSGACLSAVDAHS------QVCSILWSPHYKELISGHG---FAQN----  264 (318)
T ss_dssp             EEEEEECTTSTTEEEEEE-CTTTCEEEEEETTTCCEEEEEECSS------CEEEEEEETTTTEEEEEEC---TTTC----
T ss_pred             eEEEEecCCCCcEEEEEe-cCCCCEEEEEeccccccccccccee------eeeeeeecccccceEEEEE---cCCC----
Confidence            77899999988 444333 2233347788887776554443221      1346889999999884443   2344    


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR  388 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  388 (790)
                          .|.++|+.+++     ....|..+...+.. ++|+|||+.|+-.+.++.   -.||.
T Consensus       265 ----~i~iwd~~~~~-----~~~~l~gH~~~V~~-l~~spdg~~l~S~s~D~~---v~iWd  312 (318)
T 4ggc_A          265 ----QLVIWKYPTMA-----KVAELKGHTSRVLS-LTMSPDGATVASAAADET---LRLWR  312 (318)
T ss_dssp             ----CEEEEETTTCC-----EEEEECCCSSCEEE-EEECTTSSCEEEEETTTE---EEEEC
T ss_pred             ----EEEEEECCCCc-----EEEEEcCCCCCEEE-EEEcCCCCEEEEEecCCe---EEEEE
Confidence                68999998876     24556655555665 899999998776666543   55553

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=98.54  E-value=5.6e-05  Score=76.60  Aligned_cols=125  Identities=12%  Similarity=0.107  Sum_probs=69.4

Q ss_pred             CCCCEEEEEEEccC-------------CcEEEEEeccCcceEEEEEECCCCcee--EEEEEeCCCcccccCCceeEccCC
Q psy463          244 NVEPVLSRVNWANE-------------SVVAAWVNRVQNRARITRCSINEGTCD--VVFSRDLDRGWFEPFDHLRFSSDG  308 (790)
Q Consensus       244 ~~~~~~~~~~wspD-------------g~~~~~~~r~~~~~~i~~~~~~~g~~~--~l~~~~~~~~~~~~~~~~~~spDg  308 (790)
                      .....+..+.|+|+             +++++....+.   .|.+.|+.++...  .+..-.+...+   ....+|+||+
T Consensus       143 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~---~v~lwd~~~~~~~~~~~~~l~~H~~~---V~~v~~sp~~  216 (297)
T 2pm7_B          143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN---LVKIWKYNSDAQTYVLESTLEGHSDW---VRDVAWSPTV  216 (297)
T ss_dssp             CCSSCEEEEEECCCC------------CCEEEEEETTS---CEEEEEEETTTTEEEEEEEECCCSSC---EEEEEECCCC
T ss_pred             cccCccceEeecCCcccccccCCCCCCcceEEEEcCCC---cEEEEEEcCCCceEEEEEEecCCCCc---eEEEEECCCC
Confidence            34456788999997             35554444332   2666666655421  22222222222   3478999996


Q ss_pred             ---CEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc--CCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          309 ---KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT--RGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       309 ---~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                         +.|+ +.+    .++        .|.++|++++..  ......+.  .....+.. ++|+|||+.|+..+.++.   
T Consensus       217 ~~~~~la-s~s----~D~--------~v~iWd~~~~~~--~~~~~~~~~~~~~~~v~~-~~~s~~g~~las~~~D~~---  277 (297)
T 2pm7_B          217 LLRSYMA-SVS----QDR--------TCIIWTQDNEQG--PWKKTLLKEEKFPDVLWR-ASWSLSGNVLALSGGDNK---  277 (297)
T ss_dssp             SSSEEEE-EEE----TTS--------CEEEEEESSTTS--CCEEEESSSSCCSSCEEE-EEECSSSCCEEEEETTSC---
T ss_pred             CCceEEE-EEE----CCC--------cEEEEEeCCCCC--ccceeeeecccCCCcEEE-EEECCCCCEEEEEcCCCc---
Confidence               5454 665    456        466777655320  00011221  11222333 789999998887777654   


Q ss_pred             EEEEEEEcCC
Q psy463          384 QHMYRINIAD  393 (790)
Q Consensus       384 ~~l~~~~~~~  393 (790)
                      .+||.....+
T Consensus       278 v~lw~~~~~g  287 (297)
T 2pm7_B          278 VTLWKENLEG  287 (297)
T ss_dssp             EEEEEECTTS
T ss_pred             EEEEEECCCC
Confidence            7888776543

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=98.54  E-value=3.2e-05  Score=78.80  Aligned_cols=157  Identities=11%  Similarity=0.043  Sum_probs=93.5

Q ss_pred             CCCCEEEEEEEcc-CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      .....+..+.|+| +++.++....+..   |.++|  .+.......... .   .......|+|+|+ ++ +.+    .+
T Consensus       140 ~~~~~v~~~~~~~~~~~~l~~~~~d~~---i~i~d--~~~~~~~~~~~~-~---~~i~~~~~~~~~~-~~-~~~----~d  204 (313)
T 3odt_A          140 AHNASVWDAKVVSFSENKFLTASADKT---IKLWQ--NDKVIKTFSGIH-N---DVVRHLAVVDDGH-FI-SCS----ND  204 (313)
T ss_dssp             CCSSCEEEEEEEETTTTEEEEEETTSC---EEEEE--TTEEEEEECSSC-S---SCEEEEEEEETTE-EE-EEE----TT
T ss_pred             cCCCceeEEEEccCCCCEEEEEECCCC---EEEEe--cCceEEEEeccC-c---ccEEEEEEcCCCe-EE-Ecc----CC
Confidence            3455677889988 8885555544322   77777  333332222111 1   1244789999998 54 444    45


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                      |        .|.++|+.+++     ....+......+.. +.|+|+++ |+..+.+     ..|+..++..  ++.....
T Consensus       205 g--------~i~i~d~~~~~-----~~~~~~~~~~~i~~-~~~~~~~~-l~~~~~d-----g~v~iwd~~~--~~~~~~~  262 (313)
T 3odt_A          205 G--------LIKLVDMHTGD-----VLRTYEGHESFVYC-IKLLPNGD-IVSCGED-----RTVRIWSKEN--GSLKQVI  262 (313)
T ss_dssp             S--------EEEEEETTTCC-----EEEEEECCSSCEEE-EEECTTSC-EEEEETT-----SEEEEECTTT--CCEEEEE
T ss_pred             C--------eEEEEECCchh-----hhhhhhcCCceEEE-EEEecCCC-EEEEecC-----CEEEEEECCC--CceeEEE
Confidence            5        69999998776     23344444444554 78999994 5555444     4677777765  3332222


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      ..      ....+..+.|+|+++.++.+  .  -..|.++++.++
T Consensus       263 ~~------~~~~i~~~~~~~~~~~~~~~--~--dg~i~iw~~~~~  297 (313)
T 3odt_A          263 TL------PAISIWSVDCMSNGDIIVGS--S--DNLVRIFSQEKS  297 (313)
T ss_dssp             EC------SSSCEEEEEECTTSCEEEEE--T--TSCEEEEESCGG
T ss_pred             ec------cCceEEEEEEccCCCEEEEe--C--CCcEEEEeCCCC
Confidence            21      34577889999999954322  1  345788887653

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=98.53  E-value=4.1e-05  Score=79.49  Aligned_cols=179  Identities=11%  Similarity=0.103  Sum_probs=103.7

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|.+.|+.+++.     ...+.                 .....+..+.|+|||+.++....+.   .|.+.|+.+...
T Consensus        98 ~~v~lwd~~~~~~-----~~~~~-----------------~h~~~v~~v~~sp~~~~l~s~~~d~---~i~~wd~~~~~~  152 (343)
T 2xzm_R           98 KTLRLWDLRTGTT-----YKRFV-----------------GHQSEVYSVAFSPDNRQILSAGAER---EIKLWNILGECK  152 (343)
T ss_dssp             SEEEEEETTSSCE-----EEEEE-----------------CCCSCEEEEEECSSTTEEEEEETTS---CEEEEESSSCEE
T ss_pred             CcEEEEECCCCcE-----EEEEc-----------------CCCCcEEEEEECCCCCEEEEEcCCC---EEEEEeccCCce
Confidence            5778888887653     12232                 4456688999999999665554432   277888764322


Q ss_pred             eEEEEEeCCCcccccCCceeEccCC----------CEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDG----------KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg----------~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      ..+........+   .....|+|++          +.|+ ..+    .+|        .|.++|.....      ...+.
T Consensus       153 ~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~~~~l~-s~~----~d~--------~i~iwd~~~~~------~~~~~  210 (343)
T 2xzm_R          153 FSSAEKENHSDW---VSCVRYSPIMKSANKVQPFAPYFA-SVG----WDG--------RLKVWNTNFQI------RYTFK  210 (343)
T ss_dssp             EECCTTTSCSSC---EEEEEECCCCCSCSCCCSSCCEEE-EEE----TTS--------EEEEEETTTEE------EEEEE
T ss_pred             eeeecccCCCce---eeeeeeccccccccccCCCCCEEE-EEc----CCC--------EEEEEcCCCce------eEEEc
Confidence            211100011112   3367889887          4454 554    456        68888854332      33344


Q ss_pred             CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463          354 RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG  433 (790)
Q Consensus       354 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~  433 (790)
                      .+...+.. ++|+|||+.|+..+.+     ..|...++... ........       ....+..+.|+|++.+++...+ 
T Consensus       211 ~h~~~v~~-~~~s~~g~~l~sgs~d-----g~v~iwd~~~~-~~~~~~~~-------~~~~v~~v~~sp~~~~la~~~d-  275 (343)
T 2xzm_R          211 AHESNVNH-LSISPNGKYIATGGKD-----KKLLIWDILNL-TYPQREFD-------AGSTINQIAFNPKLQWVAVGTD-  275 (343)
T ss_dssp             CCSSCEEE-EEECTTSSEEEEEETT-----CEEEEEESSCC-SSCSEEEE-------CSSCEEEEEECSSSCEEEEEES-
T ss_pred             CccccceE-EEECCCCCEEEEEcCC-----CeEEEEECCCC-cccceeec-------CCCcEEEEEECCCCCEEEEECC-
Confidence            44444554 8899999988777666     35555566321 22211111       1235788999999998765432 


Q ss_pred             CCCCeEEEEecCCC
Q psy463          434 PGIPEIMLFDKTGQ  447 (790)
Q Consensus       434 ~~~~~i~~~~~~~~  447 (790)
                         ..+.++++.++
T Consensus       276 ---~~v~iw~~~~~  286 (343)
T 2xzm_R          276 ---QGVKIFNLMTQ  286 (343)
T ss_dssp             ---SCEEEEESSSC
T ss_pred             ---CCEEEEEeCCC
Confidence               23778877653

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=98.53  E-value=6.1e-06  Score=87.62  Aligned_cols=84  Identities=17%  Similarity=0.157  Sum_probs=54.4

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC--------cccccCCceeEccCCCEEEEEEcc
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR--------GWFEPFDHLRFSSDGKKMLLILSH  317 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~--------~~~~~~~~~~~spDg~~i~~~~~~  317 (790)
                      ...+..+.|+|||++++....+.....|.++|+.++++..........        ..........|+|||+.|+ +.+ 
T Consensus       233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-  310 (397)
T 1sq9_A          233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC-SAG-  310 (397)
T ss_dssp             CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEE-EEE-
T ss_pred             CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEE-EEe-
Confidence            566889999999996655544322235999999888665444320000        0011234789999999877 554 


Q ss_pred             ccccCCCCCcCcccEEEEEEcCCCC
Q psy463          318 NQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       318 ~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                         .+|        .|.++|+.+++
T Consensus       311 ---~dg--------~i~iwd~~~~~  324 (397)
T 1sq9_A          311 ---WDG--------KLRFWDVKTKE  324 (397)
T ss_dssp             ---TTS--------EEEEEETTTTE
T ss_pred             ---CCC--------eEEEEEcCCCc
Confidence               455        78999998776

>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}

Probab=98.52  E-value=5e-07  Score=95.78  Aligned_cols=116  Identities=13%  Similarity=0.164  Sum_probs=74.0

Q ss_pred             CccEEEEEcCCCCccccccccc-cchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhh---hccCC----ccchhHHHHHH
Q psy463          500 KYPLLIHVYGGPSSFQVTERFS-VDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG---YRRLG----TVEIYDQINVT  571 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~---~~~~~----~~~~~D~~~~~  571 (790)
                      +.| ||++|||.+...  ..+. ..+...++.+.|+.|+.+|.||+|.+.. +....   ..+++    ...++|+...+
T Consensus        38 g~P-i~l~~Ggeg~~~--~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p-~~~~~~~~~~~l~~lt~~q~~~Dl~~~~  113 (446)
T 3n2z_B           38 GGS-ILFYTGNEGDII--WFCNNTGFMWDVAEELKAMLVFAEHRYYGESLP-FGDNSFKDSRHLNFLTSEQALADFAELI  113 (446)
T ss_dssp             TCE-EEEEECCSSCHH--HHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCT-TGGGGGSCTTTSTTCSHHHHHHHHHHHH
T ss_pred             CCC-EEEEeCCCCcch--hhhhcccHHHHHHHHhCCcEEEEecCCCCCCCC-CCccccccchhhccCCHHHHHHHHHHHH
Confidence            446 556689887632  1111 1234455655688999999999887532 11111   01121    23467777777


Q ss_pred             HHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeC-CCC
Q psy463          572 RYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVA-PVT  620 (790)
Q Consensus       572 ~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~-~~~  620 (790)
                      +.+...+......+++++||||||.+|++++.++|. .+.++|+.+ |+.
T Consensus       114 ~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~-~v~g~i~ssapv~  162 (446)
T 3n2z_B          114 KHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPH-MVVGALAASAPIW  162 (446)
T ss_dssp             HHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTT-TCSEEEEETCCTT
T ss_pred             HHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhc-cccEEEEeccchh
Confidence            777663322334689999999999999999999997 666666655 543

>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}

Probab=98.52  E-value=1.4e-07  Score=104.10  Aligned_cols=115  Identities=18%  Similarity=0.228  Sum_probs=77.4

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh-hhccCCccchhHHHHHHHHHHHhCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA-GYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~-~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      +|+||++|||+......... .... ..+++.|++|+.+|||... .|  |... .....+...+.|+..+++|+.++..
T Consensus       115 ~Pviv~iHGGg~~~g~~~~~-~~~~-~~l~~~g~vvv~~nYRl~~-~G--f~~~~~~~~~~n~gl~D~~~al~wv~~~i~  189 (551)
T 2fj0_A          115 LPVLVFIHGGGFAFGSGDSD-LHGP-EYLVSKDVIVITFNYRLNV-YG--FLSLNSTSVPGNAGLRDMVTLLKWVQRNAH  189 (551)
T ss_dssp             EEEEEEECCSTTTSCCSCTT-TCBC-TTGGGGSCEEEEECCCCHH-HH--HCCCSSSSCCSCHHHHHHHHHHHHHHHHTG
T ss_pred             CCEEEEEcCCccccCCCccc-ccCH-HHHHhCCeEEEEeCCcCCc-cc--cccCcccCCCCchhHHHHHHHHHHHHHHHH
Confidence            89999999988643322211 1112 2334589999999999632 11  1100 0011233568999999999987522


Q ss_pred             --CcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCC
Q psy463          580 --YIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVT  620 (790)
Q Consensus       580 --~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~  620 (790)
                        ..|+++|.|+|+|.||.++..++.... ...|+++|+.+|..
T Consensus       190 ~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~  233 (551)
T 2fj0_A          190 FFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS  233 (551)
T ss_dssp             GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred             HhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence              268999999999999999998877521 24799999988863

>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*

Probab=98.52  E-value=1.7e-07  Score=104.02  Aligned_cols=123  Identities=19%  Similarity=0.159  Sum_probs=79.5

Q ss_pred             CCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCC-CCCCh---hhhHh-hhhccCCccchhHHHHHH
Q psy463          497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRN-SALKG---NTLKY-AGYRRLGTVEIYDQINVT  571 (790)
Q Consensus       497 ~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG-~~~~g---~~~~~-~~~~~~~~~~~~D~~~~~  571 (790)
                      ..+++|+||++|||+........... ....+++..|++|+.+|||- .-++.   ..+.. ......+...+.|+..++
T Consensus       137 ~~~~~PV~v~iHGGg~~~g~~~~~~~-~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al  215 (585)
T 1dx4_A          137 TTNGLPILIWIYGGGFMTGSATLDIY-NADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI  215 (585)
T ss_dssp             CCSSEEEEEEECCSTTTCCCTTCGGG-CCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcccCCCCCCCCC-CchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHH
Confidence            34678999999999865432221111 12344444699999999993 21111   00000 011122334588999999


Q ss_pred             HHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCCC
Q psy463          572 RYLQENLP--YIDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPVT  620 (790)
Q Consensus       572 ~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~~  620 (790)
                      +|+.++..  ..|+++|.|+|+|.||.++..++... ....|+++|+.+|..
T Consensus       216 ~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~  267 (585)
T 1dx4_A          216 RWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM  267 (585)
T ss_dssp             HHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred             HHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence            99987421  26889999999999999988777642 134799999988854

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.50  E-value=0.00012  Score=76.54  Aligned_cols=147  Identities=10%  Similarity=0.120  Sum_probs=80.0

Q ss_pred             EccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCC------Cccc-ccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          254 WANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLD------RGWF-EPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       254 wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~------~~~~-~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      .+|||+.+++....   ..++++|+.++....+......      .+|. .......++|||+.++...... ...+.. 
T Consensus       207 ~~~~g~~~~~~~~~---~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~-~~~~~~-  281 (361)
T 2oiz_A          207 PALDKDKAHFVSYY---GNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPD-GKEGTH-  281 (361)
T ss_dssp             CEECSSEEEEEBTT---SEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESS-CCTTCT-
T ss_pred             ecccCCEEEEEeCC---CeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccC-CCcccc-
Confidence            37888744444432   2499999877654433221110      1111 0012478999999888443200 000100 


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL  406 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~  406 (790)
                      .+....|+++|+++++     ....+..+.  ..+ ++++|||++||. ++.     ..|.+++.++  ++++.+.. +.
T Consensus       282 ~~~~~~v~viD~~t~~-----~v~~i~~~~--p~~-ia~spdg~~l~v-~n~-----~~v~v~D~~t--~~l~~~~~-i~  344 (361)
T 2oiz_A          282 KFPAAEIWVMDTKTKQ-----RVARIPGRD--ALS-MTIDQQRNLMLT-LDG-----GNVNVYDISQ--PEPKLLRT-IE  344 (361)
T ss_dssp             TCCCSEEEEEETTTTE-----EEEEEECTT--CCE-EEEETTTTEEEE-ECS-----SCEEEEECSS--SSCEEEEE-ET
T ss_pred             cCCCceEEEEECCCCc-----EEEEEecCC--eeE-EEECCCCCEEEE-eCC-----CeEEEEECCC--CcceeeEE-ec
Confidence            0002479999998877     234454444  333 789999997764 443     3677778876  53344332 00


Q ss_pred             ccCCCcccEEEEEEecCCc
Q psy463          407 TSANQKCSYSGATFSTNVS  425 (790)
Q Consensus       407 ~~~~~~~~~~~~~~s~dg~  425 (790)
                      .   ....-..+.++|||+
T Consensus       345 ~---~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          345 G---AAEASLQVQFHPVGG  360 (361)
T ss_dssp             T---SCSSEEEEEECCCSC
T ss_pred             c---CCCCcEEEEecCCCC
Confidence            0   122345678999986

>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E

Probab=98.50  E-value=3.1e-07  Score=93.69  Aligned_cols=107  Identities=11%  Similarity=0.051  Sum_probs=74.2

Q ss_pred             CCccEEEEEcCCCCccccc---cccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVT---ERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQ  575 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~---~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~  575 (790)
                      +..|+||++||..+.....   ..|. . ....++++||.|+++|++|.+.....          ....+++.+.++.++
T Consensus         6 ~~~~~vVlvHG~~~~~~~~~~~~~w~-~-l~~~L~~~G~~V~~~d~~g~g~s~~~----------~~~~~~l~~~i~~~l   73 (320)
T 1ys1_X            6 ATRYPIILVHGLTGTDKYAGVLEYWY-G-IQEDLQQRGATVYVANLSGFQSDDGP----------NGRGEQLLAYVKTVL   73 (320)
T ss_dssp             CCSSCEEEECCTTCCSEETTTEESST-T-HHHHHHHTTCCEEECCCCSSCCSSST----------TSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCccccchHHHHH-H-HHHHHHhCCCEEEEEcCCCCCCCCCC----------CCCHHHHHHHHHHHH
Confidence            3457799999987763111   2233 2 33445558999999999997654221          123455666666665


Q ss_pred             HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      +.   .+.+++.|+||||||.++..++.++|. .++.++.+++...
T Consensus        74 ~~---~~~~~v~lvGHS~GG~va~~~a~~~p~-~V~~lV~i~~p~~  115 (320)
T 1ys1_X           74 AA---TGATKVNLVGHSQGGLTSRYVAAVAPD-LVASVTTIGTPHR  115 (320)
T ss_dssp             HH---HCCSCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCTT
T ss_pred             HH---hCCCCEEEEEECHhHHHHHHHHHhChh-hceEEEEECCCCC
Confidence            53   235799999999999999999998875 8999998888644

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=98.49  E-value=0.00025  Score=73.07  Aligned_cols=164  Identities=11%  Similarity=0.107  Sum_probs=94.0

Q ss_pred             CCCEEEEEEEccCCc--EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          245 VEPVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       245 ~~~~~~~~~wspDg~--~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      ....+..+.|++++.  +++....+.   .|.+.++.++++.......  .+   ......|+|||+.|+ +.+    .+
T Consensus       170 ~~~~v~~~~~~~~~~~~~~~s~~~d~---~i~i~d~~~~~~~~~~~~h--~~---~v~~~~~s~~~~~l~-s~s----~D  236 (340)
T 4aow_A          170 HSEWVSCVRFSPNSSNPIIVSCGWDK---LVKVWNLANCKLKTNHIGH--TG---YLNTVTVSPDGSLCA-SGG----KD  236 (340)
T ss_dssp             CSSCEEEEEECSCSSSCEEEEEETTS---CEEEEETTTTEEEEEECCC--SS---CEEEEEECTTSSEEE-EEE----TT
T ss_pred             ccCcccceEEccCCCCcEEEEEcCCC---EEEEEECCCCceeeEecCC--CC---cEEEEEECCCCCEEE-EEe----CC
Confidence            345577889999987  444333322   2888899888765443221  11   234689999999877 555    45


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-cee
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECI  401 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~l  401 (790)
                      |        .|.++|+.+.+     ....+.... .+.. ..|+|++..+ ..+.+     ..|...++.+  +.. ..+
T Consensus       237 g--------~i~iwd~~~~~-----~~~~~~~~~-~v~~-~~~~~~~~~~-~~~~d-----~~i~iwd~~~--~~~~~~~  293 (340)
T 4aow_A          237 G--------QAMLWDLNEGK-----HLYTLDGGD-IINA-LCFSPNRYWL-CAATG-----PSIKIWDLEG--KIIVDEL  293 (340)
T ss_dssp             C--------EEEEEETTTTE-----EEEEEECSS-CEEE-EEECSSSSEE-EEEET-----TEEEEEETTT--TEEEEEE
T ss_pred             C--------eEEEEEeccCc-----eeeeecCCc-eEEe-eecCCCCcee-eccCC-----CEEEEEECCC--CeEEEec
Confidence            6        68889988765     133333322 3333 7889987644 34433     2455556654  211 111


Q ss_pred             eecc--cccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          402 TCDL--LTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       402 t~~~--~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      ....  .........+..++|||||++|+.....   ..|++++++++
T Consensus       294 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D---g~v~iW~~~tG  338 (340)
T 4aow_A          294 KQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD---NLVRVWQVTIG  338 (340)
T ss_dssp             CCC-------CCCCCEEEEEECTTSSEEEEEETT---SCEEEEEEEC-
T ss_pred             cccceeeeccCCCCCEEEEEECCCCCEEEEEeCC---CEEEEEeCCCc
Confidence            1100  0011234567889999999988654322   34777777654

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.49  E-value=5e-05  Score=77.00  Aligned_cols=208  Identities=12%  Similarity=0.117  Sum_probs=117.7

Q ss_pred             EEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEE
Q psy463          173 EILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRV  252 (790)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (790)
                      +-..|+++++. +++...           ....|++++.++++.+      .+                  ........+
T Consensus        16 Egp~w~~~~~~-l~~~d~-----------~~~~i~~~d~~~~~~~------~~------------------~~~~~~~~i   59 (297)
T 3g4e_A           16 ESPVWEEVSNS-LLFVDI-----------PAKKVCRWDSFTKQVQ------RV------------------TMDAPVSSV   59 (297)
T ss_dssp             EEEEEETTTTE-EEEEET-----------TTTEEEEEETTTCCEE------EE------------------ECSSCEEEE
T ss_pred             cCCeEECCCCE-EEEEEC-----------CCCEEEEEECCCCcEE------EE------------------eCCCceEEE
Confidence            34577876653 454432           1268999998876521      11                  123446788


Q ss_pred             EEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc-----CCCCCc
Q psy463          253 NWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES-----DGSTPV  327 (790)
Q Consensus       253 ~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~-----~g~~~~  327 (790)
                      .++|||++++...     ..|++++.++++.+.+......... .......++|||+ |++........     ..    
T Consensus        60 ~~~~dG~l~v~~~-----~~l~~~d~~~g~~~~~~~~~~~~~~-~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~----  128 (297)
T 3g4e_A           60 ALRQSGGYVATIG-----TKFCALNWKEQSAVVLATVDNDKKN-NRFNDGKVDPAGR-YFAGTMAEETAPAVLERH----  128 (297)
T ss_dssp             EEBTTSSEEEEET-----TEEEEEETTTTEEEEEEECCTTCSS-EEEEEEEECTTSC-EEEEEEECCSBTTBCCTT----
T ss_pred             EECCCCCEEEEEC-----CeEEEEECCCCcEEEEEecCCCCCC-CCCCCEEECCCCC-EEEecCCcccccccccCC----
Confidence            9999999444332     2499999999988776654221111 1134688999998 55443210000     11    


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc---eeeec
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE---CITCD  404 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~lt~~  404 (790)
                        ...||+++.++ +      ...+..+. .....++|+||++.+|+.....    ..|++++++..++...   .+.. 
T Consensus       129 --~~~l~~~d~~g-~------~~~~~~~~-~~pngi~~spdg~~lyv~~~~~----~~i~~~~~d~~~G~~~~~~~~~~-  193 (297)
T 3g4e_A          129 --QGALYSLFPDH-H------VKKYFDQV-DISNGLDWSLDHKIFYYIDSLS----YSVDAFDYDLQTGQISNRRSVYK-  193 (297)
T ss_dssp             --CEEEEEECTTS-C------EEEEEEEE-SBEEEEEECTTSCEEEEEEGGG----TEEEEEEECTTTCCEEEEEEEEE-
T ss_pred             --CcEEEEEECCC-C------EEEEeecc-ccccceEEcCCCCEEEEecCCC----CcEEEEeccCCCCcccCcEEEEE-
Confidence              34799998753 3      33332221 1223388999999998887653    3677777632114321   1111 


Q ss_pred             ccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463          405 LLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       405 ~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                         ..........+.++++|..++....   ...|++++.++++
T Consensus       194 ---~~~~~~~p~g~~~d~~G~lwva~~~---~~~v~~~d~~tG~  231 (297)
T 3g4e_A          194 ---LEKEEQIPDGMCIDAEGKLWVACYN---GGRVIRLDPVTGK  231 (297)
T ss_dssp             ---CCGGGCEEEEEEEBTTSCEEEEEET---TTEEEEECTTTCC
T ss_pred             ---CCCCCCCCCeeEECCCCCEEEEEcC---CCEEEEEcCCCce
Confidence               0112234567789999975544332   2358888887443

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.48  E-value=8.7e-06  Score=83.04  Aligned_cols=234  Identities=12%  Similarity=0.011  Sum_probs=124.3

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+|+|||+.|+|+....+            .|++++.++.       ...+.... ...+-+.++++++  ++.... 
T Consensus        48 egp~~~~~g~~l~~~d~~~~------------~i~~~~~~g~-------~~~~~~~~-~~~~gl~~d~dG~--l~v~~~-  104 (305)
T 3dr2_A           48 EGPAWWEAQRTLVWSDLVGR------------RVLGWREDGT-------VDVLLDAT-AFTNGNAVDAQQR--LVHCEH-  104 (305)
T ss_dssp             EEEEEEGGGTEEEEEETTTT------------EEEEEETTSC-------EEEEEESC-SCEEEEEECTTSC--EEEEET-
T ss_pred             cCCeEeCCCCEEEEEECCCC------------EEEEEeCCCC-------EEEEeCCC-CccceeeECCCCC--EEEEEC-
Confidence            46899999999988764333            7898887432       22222221 1223345666554  433321 


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEe------
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVN------  265 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~------  265 (790)
                                ....|++++.+ |+.      ..+...       .     ..........+.++|||++.+...      
T Consensus       105 ----------~~~~v~~~~~~-g~~------~~~~~~-------~-----~~~~~~~~~~i~~d~dG~l~~td~~~g~~~  155 (305)
T 3dr2_A          105 ----------GRRAITRSDAD-GQA------HLLVGR-------Y-----AGKRLNSPNDLIVARDGAIWFTDPPFGLRK  155 (305)
T ss_dssp             ----------TTTEEEEECTT-SCE------EEEECE-------E-----TTEECSCCCCEEECTTSCEEEECCSGGGSC
T ss_pred             ----------CCCEEEEECCC-CCE------EEEEec-------c-----CCCccCCCCCEEECCCCCEEEeCcCCCccc
Confidence                      11468888876 331      111100       0     000011223578999999443210      


Q ss_pred             c--------cCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEE
Q psy463          266 R--------VQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFID  337 (790)
Q Consensus       266 r--------~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d  337 (790)
                      .        ......|++++.++|+.+.+. ...      ....+.|||||+.|++..+. ....+      ...|++++
T Consensus       156 ~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~------~p~gl~~spdg~~lyv~~~~-~~~~~------~~~i~~~~  221 (305)
T 3dr2_A          156 PSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD------HPNGLAFSPDEQTLYVSQTP-EQGHG------SVEITAFA  221 (305)
T ss_dssp             GGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES------SEEEEEECTTSSEEEEEECC-C---C------CCEEEEEE
T ss_pred             cccccccccccCCCeEEEEcCCCCcEEEEe-cCC------CCcceEEcCCCCEEEEEecC-CcCCC------CCEEEEEE
Confidence            0        011346999999888877765 321      12368999999988854330 00011      24799998


Q ss_pred             cCCCCcccCCCcccccC-CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEE
Q psy463          338 LDDQAGIKDKVPVPLTR-GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYS  416 (790)
Q Consensus       338 ~~~~~~~~~~~~~~lt~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~  416 (790)
                      ++++. ..+  .+.+.. ......+ +.++++|+ |++.+ .     ..|++++.++  .....+..       .. ...
T Consensus       222 ~~~~~-l~~--~~~~~~~~~~~pdg-i~~d~~G~-lwv~~-~-----~gv~~~~~~g--~~~~~~~~-------~~-~~~  280 (305)
T 3dr2_A          222 WRDGA-LHD--RRHFASVPDGLPDG-FCVDRGGW-LWSSS-G-----TGVCVFDSDG--QLLGHIPT-------PG-TAS  280 (305)
T ss_dssp             EETTE-EEE--EEEEECCSSSCCCS-EEECTTSC-EEECC-S-----SEEEEECTTS--CEEEEEEC-------SS-CCC
T ss_pred             ecCCC-ccC--CeEEEECCCCCCCe-EEECCCCC-EEEec-C-----CcEEEECCCC--CEEEEEEC-------CC-cee
Confidence            86532 000  111111 1111122 67889998 55544 2     2488888755  33333332       12 356


Q ss_pred             EEEEecCCcEEEEEee
Q psy463          417 GATFSTNVSYYVLSCI  432 (790)
Q Consensus       417 ~~~~s~dg~~~~~~~~  432 (790)
                      ...|++|++.|+++..
T Consensus       281 ~~~f~~d~~~L~it~~  296 (305)
T 3dr2_A          281 NCTFDQAQQRLFITGG  296 (305)
T ss_dssp             EEEECTTSCEEEEEET
T ss_pred             EEEEeCCCCEEEEEcC
Confidence            6889999988876643

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=98.47  E-value=6.9e-05  Score=75.92  Aligned_cols=238  Identities=11%  Similarity=0.088  Sum_probs=123.7

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeecc-CCccEEEEeccc
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDER-ENNPLLILSHNQ  192 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~-~~~~~~~~~~~~  192 (790)
                      .+|+|||+.|+-.+ .++            .|.+++++++..   +....+......+..+ .|.++ .++ + +++...
T Consensus        15 ~~~s~~g~~las~s-~D~------------~v~iw~~~~~~~---~~~~~l~gH~~~V~~v-~~s~~~~g~-~-l~s~s~   75 (297)
T 2pm7_B           15 AVMDYYGKRMATCS-SDK------------TIKIFEVEGETH---KLIDTLTGHEGPVWRV-DWAHPKFGT-I-LASCSY   75 (297)
T ss_dssp             EEECTTSSEEEEEE-TTS------------CEEEEEBCSSCB---CCCEEECCCSSCEEEE-EECCGGGCS-E-EEEEET
T ss_pred             EEECCCCCEEEEEe-CCC------------EEEEEecCCCCc---EEEEEEccccCCeEEE-EecCCCcCC-E-EEEEcC
Confidence            47899999877433 222            577777754320   1233444444444444 45432 222 2 222211


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccC--CcEEEEEeccCcc
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANE--SVVAAWVNRVQNR  270 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~~~~~~r~~~~  270 (790)
                                ...|.+.++.+++...+   ..+.                 .....+..+.|+|+  |++++....+.  
T Consensus        76 ----------D~~v~iWd~~~~~~~~~---~~~~-----------------~h~~~v~~v~~~p~~~g~~l~s~s~d~--  123 (297)
T 2pm7_B           76 ----------DGKVMIWKEENGRWSQI---AVHA-----------------VHSASVNSVQWAPHEYGPMLLVASSDG--  123 (297)
T ss_dssp             ----------TTEEEEEEBSSSCBCCC---EEEC-----------------CCSSCEEEEEECCGGGCSEEEEEETTS--
T ss_pred             ----------CCEEEEEEcCCCceEEE---EEee-----------------cCCCceeEEEeCcCCCCcEEEEEECCC--
Confidence                      14677778776542111   1111                 34456889999998  77655554432  


Q ss_pred             eEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccC-------------CCEEEEEEccccccCCCCCcCcccEEEEE
Q psy463          271 ARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSD-------------GKKMLLILSHNQESDGSTPVDSWDHLTFI  336 (790)
Q Consensus       271 ~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spD-------------g~~i~~~~~~~~~~~g~~~~~~~~~l~~~  336 (790)
                       .|.++++.++.. ...... +...   ......|+|+             ++.|+ +.+    .++        .|.++
T Consensus       124 -~v~~wd~~~~~~~~~~~~~-~h~~---~v~~~~~~p~~~~~~~~~~~~~~~~~l~-sgs----~D~--------~v~lw  185 (297)
T 2pm7_B          124 -KVSVVEFKENGTTSPIIID-AHAI---GVNSASWAPATIEEDGEHNGTKESRKFV-TGG----ADN--------LVKIW  185 (297)
T ss_dssp             -EEEEEEBCSSSCBCCEEEE-CCSS---CEEEEEECCCC------------CCEEE-EEE----TTS--------CEEEE
T ss_pred             -cEEEEEecCCCceeeeeee-cccC---ccceEeecCCcccccccCCCCCCcceEE-EEc----CCC--------cEEEE
Confidence             377788776532 111111 1111   1346789997             45555 555    455        46777


Q ss_pred             EcCCCCcccCCCcccccCCCeEEeEEEeeecCC---CEEEEEEcCCCCceEEEEEEEcCCCCCCc--ceeeecccccCCC
Q psy463          337 DLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE---NNVYFLSTQGSPIVQHMYRINIADPTATP--ECITCDLLTSANQ  411 (790)
Q Consensus       337 d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~~lt~~~~~~~~~  411 (790)
                      |+.+++... .....|..+...+.. ++|+|++   +.|+-.+.++.   ..||.++...  +..  +.+..     ...
T Consensus       186 d~~~~~~~~-~~~~~l~~H~~~V~~-v~~sp~~~~~~~las~s~D~~---v~iWd~~~~~--~~~~~~~~~~-----~~~  253 (297)
T 2pm7_B          186 KYNSDAQTY-VLESTLEGHSDWVRD-VAWSPTVLLRSYMASVSQDRT---CIIWTQDNEQ--GPWKKTLLKE-----EKF  253 (297)
T ss_dssp             EEETTTTEE-EEEEEECCCSSCEEE-EEECCCCSSSEEEEEEETTSC---EEEEEESSTT--SCCEEEESSS-----SCC
T ss_pred             EEcCCCceE-EEEEEecCCCCceEE-EEECCCCCCceEEEEEECCCc---EEEEEeCCCC--Cccceeeeec-----ccC
Confidence            765543000 001234444444554 8999996   55555555544   6676554321  111  11110     112


Q ss_pred             cccEEEEEEecCCcEEEEEee
Q psy463          412 KCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       412 ~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      ...+..++|||+|++|+....
T Consensus       254 ~~~v~~~~~s~~g~~las~~~  274 (297)
T 2pm7_B          254 PDVLWRASWSLSGNVLALSGG  274 (297)
T ss_dssp             SSCEEEEEECSSSCCEEEEET
T ss_pred             CCcEEEEEECCCCCEEEEEcC
Confidence            456788999999998866543

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.47  E-value=7.2e-05  Score=76.94  Aligned_cols=208  Identities=10%  Similarity=0.058  Sum_probs=117.1

Q ss_pred             EEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEE
Q psy463          174 ILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVN  253 (790)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (790)
                      -..|+++++. ++++...           ...|++++.++++.      ..+.                  .......+.
T Consensus        53 gp~~~~~~~~-l~~~d~~-----------~~~i~~~d~~~~~~------~~~~------------------~~~~v~~i~   96 (326)
T 2ghs_A           53 GPTFDPASGT-AWWFNIL-----------ERELHELHLASGRK------TVHA------------------LPFMGSALA   96 (326)
T ss_dssp             EEEEETTTTE-EEEEEGG-----------GTEEEEEETTTTEE------EEEE------------------CSSCEEEEE
T ss_pred             CCeEeCCCCE-EEEEECC-----------CCEEEEEECCCCcE------EEEE------------------CCCcceEEE
Confidence            3478887653 4544321           25899999987652      1111                  123467789


Q ss_pred             EccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEE
Q psy463          254 WANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHL  333 (790)
Q Consensus       254 wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l  333 (790)
                      |+|||++++....     .|++++.++++.+.+........ ......+.++|||+ +++.........+      ...|
T Consensus        97 ~~~dg~l~v~~~~-----gl~~~d~~~g~~~~~~~~~~~~~-~~~~~~i~~d~~G~-l~v~~~~~~~~~~------~~~l  163 (326)
T 2ghs_A           97 KISDSKQLIASDD-----GLFLRDTATGVLTLHAELESDLP-GNRSNDGRMHPSGA-LWIGTMGRKAETG------AGSI  163 (326)
T ss_dssp             EEETTEEEEEETT-----EEEEEETTTCCEEEEECSSTTCT-TEEEEEEEECTTSC-EEEEEEETTCCTT------CEEE
T ss_pred             EeCCCeEEEEECC-----CEEEEECCCCcEEEEeeCCCCCC-CCCCCCEEECCCCC-EEEEeCCCcCCCC------ceEE
Confidence            9999995444422     29999999998776653211000 01134688999998 4433321000012      3479


Q ss_pred             EEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCC-Cc---ceeeecccccC
Q psy463          334 TFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTA-TP---ECITCDLLTSA  409 (790)
Q Consensus       334 ~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~---~~lt~~~~~~~  409 (790)
                      |+++  +++      .+.+..+.. ....++|+|||+.+|+.....    ..|++++++..++ +.   +.+.. +   .
T Consensus       164 ~~~~--~g~------~~~~~~~~~-~~~~i~~s~dg~~lyv~~~~~----~~I~~~d~~~~~Gl~~~~~~~~~~-~---~  226 (326)
T 2ghs_A          164 YHVA--KGK------VTKLFADIS-IPNSICFSPDGTTGYFVDTKV----NRLMRVPLDARTGLPTGKAEVFID-S---T  226 (326)
T ss_dssp             EEEE--TTE------EEEEEEEES-SEEEEEECTTSCEEEEEETTT----CEEEEEEBCTTTCCBSSCCEEEEE-C---T
T ss_pred             EEEe--CCc------EEEeeCCCc-ccCCeEEcCCCCEEEEEECCC----CEEEEEEcccccCCcccCceEEEE-C---C
Confidence            9998  454      444432211 123378999999998876542    4788888751113 22   12211 0   0


Q ss_pred             CCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          410 NQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       410 ~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                      ........+.++++|..++....   ...|++++.+++.+.
T Consensus       227 ~~~~~p~gi~~d~~G~lwva~~~---~~~v~~~d~~g~~~~  264 (326)
T 2ghs_A          227 GIKGGMDGSVCDAEGHIWNARWG---EGAVDRYDTDGNHIA  264 (326)
T ss_dssp             TSSSEEEEEEECTTSCEEEEEET---TTEEEEECTTCCEEE
T ss_pred             CCCCCCCeeEECCCCCEEEEEeC---CCEEEEECCCCCEEE
Confidence            12234566788899975544332   235788877554433

>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A

Probab=98.46  E-value=1.1e-07  Score=105.07  Aligned_cols=133  Identities=20%  Similarity=0.313  Sum_probs=82.4

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc----cch-HHHHHhcCCeEEEEEcCCCCCCChhhhHhh-hh
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS----VDW-NLYLADNKDIVVAYIDGRNSALKGNTLKYA-GY  556 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~----~~~-~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~-~~  556 (790)
                      +...+|.|.... ...+++|+||++|||+..........    ..+ ...++.+.|++|+.+|||.... |  |... ..
T Consensus        81 l~lnv~~P~~~~-~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~-G--fl~~~~~  156 (579)
T 2bce_A           81 LYLNIWVPQGRK-EVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPL-G--FLSTGDS  156 (579)
T ss_dssp             CEEEEEEEECSS-SCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHH-H--HCCCSST
T ss_pred             CEEEEEECCCCC-CCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccc-c--CCcCCCC
Confidence            344466776431 02457899999999986432111100    011 2344444589999999994221 1  1000 01


Q ss_pred             ccCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCC
Q psy463          557 RRLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPV  619 (790)
Q Consensus       557 ~~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~  619 (790)
                      ...+...+.|+..+++|+.++..  ..|+++|.|+|+|.||.++..++... ....|+++|+.+|.
T Consensus       157 ~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~  222 (579)
T 2bce_A          157 NLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV  222 (579)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence            11222347899999999987522  26899999999999999998877641 23489999988874

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=98.46  E-value=7.7e-06  Score=88.23  Aligned_cols=165  Identities=12%  Similarity=0.104  Sum_probs=102.4

Q ss_pred             CCCEEEEEEEcc-CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          245 VEPVLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       245 ~~~~~~~~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ....+..+.|+| ||++++....+..   |.+.|++++..+.+........+   .....|+|||+.|+ +.+    .+|
T Consensus       163 H~~~V~~l~f~p~~~~~l~s~s~D~~---v~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~-~g~----~dg  231 (435)
T 4e54_B          163 AGGSITGLKFNPLNTNQFYASSMEGT---TRLQDFKGNILRVFASSDTINIW---FCSLDVSASSRMVV-TGD----NVG  231 (435)
T ss_dssp             SSCCCCEEEECSSCTTEEEEECSSSC---EEEEETTSCEEEEEECCSSCSCC---CCCEEEETTTTEEE-EEC----SSS
T ss_pred             CCCCEEEEEEeCCCCCEEEEEeCCCE---EEEeeccCCceeEEeccCCCCcc---EEEEEECCCCCEEE-EEe----CCC
Confidence            445678999998 6776665544332   88889988766655443222212   34689999999877 554    456


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC  403 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~  403 (790)
                              .|.++|+++..      ...+..+...+.. +.|+|+++.+++.+...    ..|...++...... ..+..
T Consensus       232 --------~i~~wd~~~~~------~~~~~~h~~~v~~-v~~~p~~~~~~~s~s~d----~~v~iwd~~~~~~~-~~~~~  291 (435)
T 4e54_B          232 --------NVILLNMDGKE------LWNLRMHKKKVTH-VALNPCCDWFLATASVD----QTVKIWDLRQVRGK-ASFLY  291 (435)
T ss_dssp             --------BEEEEESSSCB------CCCSBCCSSCEEE-EEECTTCSSEEEEEETT----SBCCEEETTTCCSS-SCCSB
T ss_pred             --------cEeeeccCcce------eEEEecccceEEe-eeecCCCceEEEEecCc----ceeeEEeccccccc-ceEEE
Confidence                    68899987765      5556555555655 78999998666655432    23334455431111 11111


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                          ..+....+..+.|||||++|+.....   ..|.++++..+
T Consensus       292 ----~~~h~~~v~~~~~spdg~~l~s~~~D---~~i~iwd~~~~  328 (435)
T 4e54_B          292 ----SLPHRHPVNAACFSPDGARLLTTDQK---SEIRVYSASQW  328 (435)
T ss_dssp             ----CCBCSSCEEECCBCTTSSEEEEEESS---SCEEEEESSSS
T ss_pred             ----eeeccccccceeECCCCCeeEEEcCC---CEEEEEECCCC
Confidence                01134567888999999988665432   35888887653

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=98.46  E-value=8.7e-06  Score=84.35  Aligned_cols=250  Identities=10%  Similarity=0.052  Sum_probs=134.2

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      ..|+|||+.|+..+. +            +.|.++++.++...  .....+......+. -+.|+++++..++..+.   
T Consensus        17 ~~~s~~~~~l~~~~~-d------------~~v~iw~~~~~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~---   77 (342)
T 1yfq_A           17 IKIIPSKSLLLITSW-D------------GSLTVYKFDIQAKN--VDLLQSLRYKHPLL-CCNFIDNTDLQIYVGTV---   77 (342)
T ss_dssp             EEEEGGGTEEEEEET-T------------SEEEEEEEETTTTE--EEEEEEEECSSCEE-EEEEEESSSEEEEEEET---
T ss_pred             EEEcCCCCEEEEEcC-C------------CeEEEEEeCCCCcc--ccceeeeecCCceE-EEEECCCCCcEEEEEcC---
Confidence            588999998776442 2            26888887665300  01122222222333 34566654301332221   


Q ss_pred             CCCCCCccccceeEEEec-CCcccccCcCCccccccccceeehhhcccCCCC--CCCEEEEEEEccCCcEEEEEeccCcc
Q psy463          194 SDGSTPVDSWDHLTFIDL-DDQAGIKDKVPVPLTRGRFTVTEILAWDEKENN--VEPVLSRVNWANESVVAAWVNRVQNR  270 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~--~~~~~~~~~wspDg~~~~~~~r~~~~  270 (790)
                               ...|.++++ .+++      ...+.                 .  ....+..+.|+| ++.++....+.  
T Consensus        78 ---------dg~i~~wd~~~~~~------~~~~~-----------------~~~~~~~v~~l~~~~-~~~l~s~~~d~--  122 (342)
T 1yfq_A           78 ---------QGEILKVDLIGSPS------FQALT-----------------NNEANLGICRICKYG-DDKLIAASWDG--  122 (342)
T ss_dssp             ---------TSCEEEECSSSSSS------EEECB-----------------SCCCCSCEEEEEEET-TTEEEEEETTS--
T ss_pred             ---------CCeEEEEEeccCCc------eEecc-----------------ccCCCCceEEEEeCC-CCEEEEEcCCC--
Confidence                     157888898 7765      23333                 3  556788999999 77555544332  


Q ss_pred             eEEEEEECCC---------CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC-
Q psy463          271 ARITRCSINE---------GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD-  340 (790)
Q Consensus       271 ~~i~~~~~~~---------g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-  340 (790)
                       .|.++++.+         +++......   .   .......|+|++  ++ +.+    .+|        .|.++|+.+ 
T Consensus       123 -~i~iwd~~~~~~~~~~~~~~~~~~~~~---~---~~v~~~~~~~~~--l~-~~~----~d~--------~i~i~d~~~~  180 (342)
T 1yfq_A          123 -LIEVIDPRNYGDGVIAVKNLNSNNTKV---K---NKIFTMDTNSSR--LI-VGM----NNS--------QVQWFRLPLC  180 (342)
T ss_dssp             -EEEEECHHHHTTBCEEEEESCSSSSSS---C---CCEEEEEECSSE--EE-EEE----STT--------EEEEEESSCC
T ss_pred             -eEEEEcccccccccccccCCeeeEEee---C---CceEEEEecCCc--EE-EEe----CCC--------eEEEEECCcc
Confidence             377777765         332211111   1   113468899987  44 444    445        789999877 


Q ss_pred             CCcccCCCcccccCCCeEEeEEEeeec-CCCEEEEEEcCCCCceEEEEEEEcCCCC---CCcceeeeccc--ccCCCccc
Q psy463          341 QAGIKDKVPVPLTRGRFTVTEILAWDE-KENNVYFLSTQGSPIVQHMYRINIADPT---ATPECITCDLL--TSANQKCS  414 (790)
Q Consensus       341 ~~~~~~~~~~~lt~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~---~~~~~lt~~~~--~~~~~~~~  414 (790)
                      +...   ...........+.. +.|+| +++.++..+.++.   ..||.++..+..   .....+.....  ........
T Consensus       181 ~~~~---~~~~~~~~~~~i~~-i~~~~~~~~~l~~~~~dg~---i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (342)
T 1yfq_A          181 EDDN---GTIEESGLKYQIRD-VALLPKEQEGYACSSIDGR---VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP  253 (342)
T ss_dssp             TTCC---CEEEECSCSSCEEE-EEECSGGGCEEEEEETTSE---EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCC
T ss_pred             cccc---ceeeecCCCCceeE-EEECCCCCCEEEEEecCCc---EEEEEEcCCCcccccccceeeeccccccccccccee
Confidence            4300   01112222334444 78999 9998877776532   455555443100   11122221100  00001236


Q ss_pred             EEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          415 YSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       415 ~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      +..+.|+|++++++....   -..|+++|+.+++.
T Consensus       254 i~~~~~s~~~~~l~~~~~---dg~i~vwd~~~~~~  285 (342)
T 1yfq_A          254 VNSIEFSPRHKFLYTAGS---DGIISCWNLQTRKK  285 (342)
T ss_dssp             EEEEEECTTTCCEEEEET---TSCEEEEETTTTEE
T ss_pred             EEEEEEcCCCCEEEEecC---CceEEEEcCccHhH
Confidence            788999999998865442   24588888876543

>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A

Probab=98.45  E-value=1.7e-06  Score=89.34  Aligned_cols=100  Identities=15%  Similarity=0.028  Sum_probs=64.5

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHH-HHHHHHhCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINV-TRYLQENLP  579 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~  579 (790)
                      .|.|+++||.++..   ..|. .+. ..+. .++.|+.+|.+|.+.....          ...++++.+. ++.+....+
T Consensus       101 ~~~l~~lhg~~~~~---~~~~-~l~-~~L~-~~~~v~~~d~~g~~~~~~~----------~~~~~~~a~~~~~~i~~~~~  164 (329)
T 3tej_A          101 GPTLFCFHPASGFA---WQFS-VLS-RYLD-PQWSIIGIQSPRPNGPMQT----------AANLDEVCEAHLATLLEQQP  164 (329)
T ss_dssp             SCEEEEECCTTSCC---GGGG-GGG-GTSC-TTCEEEEECCCTTTSHHHH----------CSSHHHHHHHHHHHHHHHCS
T ss_pred             CCcEEEEeCCcccc---hHHH-HHH-HhcC-CCCeEEEeeCCCCCCCCCC----------CCCHHHHHHHHHHHHHHhCC
Confidence            46789999987763   2222 122 2233 5899999999997542211          0234444433 333433222


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhc---CCCCceEEEEEeCCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALAL---DPSNVFKCGISVAPVT  620 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~---~p~~~~~~~v~~~~~~  620 (790)
                         ..++.++||||||.++..++.+   ++. .++.++...+..
T Consensus       165 ---~~~~~l~G~S~Gg~ia~~~a~~L~~~~~-~v~~lvl~d~~~  204 (329)
T 3tej_A          165 ---HGPYYLLGYSLGGTLAQGIAARLRARGE-QVAFLGLLDTWP  204 (329)
T ss_dssp             ---SSCEEEEEETHHHHHHHHHHHHHHHTTC-CEEEEEEESCCC
T ss_pred             ---CCCEEEEEEccCHHHHHHHHHHHHhcCC-cccEEEEeCCCC
Confidence               3689999999999999999988   775 788777777654

>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*

Probab=98.44  E-value=3.2e-07  Score=101.56  Aligned_cols=131  Identities=20%  Similarity=0.282  Sum_probs=83.4

Q ss_pred             EEEEEEeCCCCCC-CCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhh-hccCC
Q psy463          483 AQVKLFLPPGIDT-SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG-YRRLG  560 (790)
Q Consensus       483 i~~~~~~P~~~~~-~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~-~~~~~  560 (790)
                      +...+|.|..... ...+++|+||++|||+........+..   ..+++..+++|+.+|||... .|  |.... ....+
T Consensus       112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~---~~la~~~~~vvv~~~YRl~~-~G--fl~~~~~~~~~  185 (574)
T 3bix_A          112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG---SVLASYGNVIVITVNYRLGV-LG--FLSTGDQAAKG  185 (574)
T ss_dssp             CEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC---HHHHHHHTCEEEEECCCCHH-HH--HCCCSSSSCCC
T ss_pred             CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc---hhhhccCCEEEEEeCCcCcc-cc--cCcCCCCCCCC
Confidence            4445677864310 013568999999999876443333322   33444447999999999532 11  11000 01122


Q ss_pred             ccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEeCCC
Q psy463          561 TVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISVAPV  619 (790)
Q Consensus       561 ~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~~~~  619 (790)
                      ...+.|+..+++|+.++..  ..|+++|.|+|+|.||.++..++.....  ..|+.+|+.+|.
T Consensus       186 n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~  248 (574)
T 3bix_A          186 NYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT  248 (574)
T ss_dssp             CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred             cccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence            3458999999999987521  2688999999999999999888765432  468888887763

>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A

Probab=98.44  E-value=4.6e-07  Score=93.24  Aligned_cols=62  Identities=18%  Similarity=0.180  Sum_probs=44.6

Q ss_pred             hccCCccEEEEecCCCcccchhh-hHHHHHHHHhcCCceEEEEcCCCCCcC-CC-cchHHHHHHHHHHHHh
Q psy463          721 DRIRDKQYLLVHGTMDDNVHFQQ-SMMLAKSLQHADIMFQSQTYPDEEHGL-IG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       721 ~~i~~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~g~~~~~~~~p~~~H~~-~~-~~~~~~~~i~~fl~~~  788 (790)
                      ..+ ++|+|+++| .|..++... ...+.+.   ....++++.+|+ +|.. .. ..+.+.+.|.+||.+.
T Consensus       247 ~~i-~~Pvl~i~g-~D~~~~~~~~~~~~~~~---~~~~~~~~~v~g-~H~~~~~e~~~~~~~~i~~~L~~~  311 (319)
T 2hfk_A          247 GRS-SAPVLLVRA-SEPLGDWQEERGDWRAH---WDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDAI  311 (319)
T ss_dssp             CCC-CSCEEEEEE-SSCSSCCCGGGCCCSCC---CSSCSEEEEESS-CTTHHHHTCHHHHHHHHHHHHHHH
T ss_pred             CCc-CCCEEEEEc-CCCCCCccccccchhhc---CCCCCEEEEeCC-CcHHHHHHhHHHHHHHHHHHHHhc
Confidence            567 899999999 999888765 3322211   122468889995 8985 32 7788999999999864

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=98.43  E-value=2e-05  Score=85.13  Aligned_cols=122  Identities=12%  Similarity=0.187  Sum_probs=72.2

Q ss_pred             CCCCEEEEEEEccCC-cEEEEEeccCcceEEEEEECCCCce----eEEEEEeCCC---c----ccccCCceeEccCCCEE
Q psy463          244 NVEPVLSRVNWANES-VVAAWVNRVQNRARITRCSINEGTC----DVVFSRDLDR---G----WFEPFDHLRFSSDGKKM  311 (790)
Q Consensus       244 ~~~~~~~~~~wspDg-~~~~~~~r~~~~~~i~~~~~~~g~~----~~l~~~~~~~---~----~~~~~~~~~~spDg~~i  311 (790)
                      .....+..+.|+||| ++++....+.   .|.++|+.+++.    ...+......   .    .........|+|||+.|
T Consensus       224 ~~~~~v~~~~~~p~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  300 (447)
T 3dw8_B          224 ELTEVITAAEFHPNSCNTFVYSSSKG---TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYM  300 (447)
T ss_dssp             GCCCCEEEEEECSSCTTEEEEEETTS---CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEE
T ss_pred             ccCcceEEEEECCCCCcEEEEEeCCC---eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEE
Confidence            345668899999999 6665554433   289999988775    3333221100   0    00024478999999988


Q ss_pred             EEEEccccccCCCCCcCcccEEEEEEcCC-CCcccCCCcccccCCCeE---------------EeEEEeeecCCCEEEEE
Q psy463          312 LLILSHNQESDGSTPVDSWDHLTFIDLDD-QAGIKDKVPVPLTRGRFT---------------VTEILAWDEKENNVYFL  375 (790)
Q Consensus       312 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-~~~~~~~~~~~lt~~~~~---------------~~~~~~~s~dg~~l~~~  375 (790)
                      + ..+    . |        .|.++|+.. ++     ....+......               +. .++|+||++.|+..
T Consensus       301 ~-~~~----~-~--------~v~iwd~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~i~~~~-~~~~s~~~~~l~s~  360 (447)
T 3dw8_B          301 M-TRD----Y-L--------SVKVWDLNMENR-----PVETYQVHEYLRSKLCSLYENDCIFDKF-ECCWNGSDSVVMTG  360 (447)
T ss_dssp             E-EEE----S-S--------EEEEEETTCCSS-----CSCCEESCGGGTTTHHHHHHTSGGGCCC-CEEECTTSSEEEEE
T ss_pred             E-Eee----C-C--------eEEEEeCCCCcc-----ccceeeccccccccccccccccccccce-EEEECCCCCEEEEe
Confidence            7 555    3 5        688999875 44     12223222110               11 16899999988554


Q ss_pred             EcCCCCceEEEEEEEcCC
Q psy463          376 STQGSPIVQHMYRINIAD  393 (790)
Q Consensus       376 ~~~~~~~~~~l~~~~~~~  393 (790)
                      +.+     ..|+..++.+
T Consensus       361 s~d-----g~v~iwd~~~  373 (447)
T 3dw8_B          361 SYN-----NFFRMFDRNT  373 (447)
T ss_dssp             CST-----TEEEEEETTT
T ss_pred             ccC-----CEEEEEEcCC
Confidence            444     3555666654

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=98.43  E-value=4e-05  Score=79.15  Aligned_cols=32  Identities=13%  Similarity=0.149  Sum_probs=24.0

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEeccc
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFY   40 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~   40 (790)
                      +....+.|||||++||..+ .++...+|.+...
T Consensus        12 ~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~   43 (351)
T 3f3f_A           12 DLVHDVVYDFYGRHVATCS-SDQHIKVFKLDKD   43 (351)
T ss_dssp             SCEEEEEECSSSSEEEEEE-TTSEEEEEEECSS
T ss_pred             cceeEEEEcCCCCEEEEee-CCCeEEEEECCCC
Confidence            4457788999999988654 5777788877653

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.42  E-value=5.3e-05  Score=79.95  Aligned_cols=281  Identities=11%  Similarity=0.059  Sum_probs=143.1

Q ss_pred             eEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcce
Q psy463           83 ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  162 (790)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  162 (790)
                      -.+.++|..+++....+...       ..+...+||||+++|..+.....   ..+|.....|.++|..+.+     ...
T Consensus        99 ~~VsVID~~t~~vv~~I~vG-------~~Pgia~SpDgk~lyVan~~~~~---~~~G~~~~~VsviD~~t~~-----vv~  163 (426)
T 3c75_H           99 TQQFVIDGSTGRILGMTDGG-------FLPHPVAAEDGSFFAQASTVFER---IARGKRTDYVEVFDPVTFL-----PIA  163 (426)
T ss_dssp             EEEEEEETTTTEEEEEEEEC-------SSCEEEECTTSSCEEEEEEEEEE---TTEEEEEEEEEEECTTTCC-----EEE
T ss_pred             CeEEEEECCCCEEEEEEECC-------CCCceEECCCCCEEEEEeccccc---cccCCCCCEEEEEECCCCc-----EEE
Confidence            56778888777655332221       11256899999999887642110   0011123379999988774     222


Q ss_pred             ecccc---ce---EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehh
Q psy463          163 PLTRG---RF---TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL  236 (790)
Q Consensus       163 ~lt~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~  236 (790)
                      .|.-+   .+   .--.-+.++++++  .+|+.....         ...|.++|+++++..+     .+.          
T Consensus       164 ~I~v~g~~r~~~g~~P~~~~~spDGk--~lyV~n~~~---------~~~VsVID~~t~kvv~-----~I~----------  217 (426)
T 3c75_H          164 DIELPDAPRFLVGTYQWMNALTPDNK--NLLFYQFSP---------APAVGVVDLEGKTFDR-----MLD----------  217 (426)
T ss_dssp             EEEETTCCCCCBSCCGGGSEECTTSS--EEEEEECSS---------SCEEEEEETTTTEEEE-----EEE----------
T ss_pred             EEECCCccccccCCCcceEEEcCCCC--EEEEEecCC---------CCeEEEEECCCCeEEE-----EEE----------
Confidence            22111   00   0001135677776  556554211         1589999998876321     111          


Q ss_pred             hcccCCCCCCCEEEEEEEccCCc--EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEE
Q psy463          237 AWDEKENNVEPVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLI  314 (790)
Q Consensus       237 ~~~~~~~~~~~~~~~~~wspDg~--~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~  314 (790)
                             - ...   ....|+|+  ++.....+.    +..++..+++........-+.+-......+.+++||+.++|.
T Consensus       218 -------v-~g~---~~~~p~g~~~~v~~~~dG~----~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~  282 (426)
T 3c75_H          218 -------V-PDC---YHIFPASPTVFYMNCRDGS----LARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP  282 (426)
T ss_dssp             -------C-CSE---EEEEEEETTEEEEEETTSS----EEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE
T ss_pred             -------c-CCc---eeeccCCCcEEEEEcCCCC----EEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE
Confidence                   0 111   12234443  222221111    344444434332110000000000012246789999999854


Q ss_pred             EccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc------CC----CeEEe--EEEeeecCCCEEEEEEcCCC--
Q psy463          315 LSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT------RG----RFTVT--EILAWDEKENNVYFLSTQGS--  380 (790)
Q Consensus       315 ~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt------~~----~~~~~--~~~~~s~dg~~l~~~~~~~~--  380 (790)
                       +    ..|        .++++|..+++      ...+.      ..    .+...  ..+.++||++++|+....+.  
T Consensus       283 -s----~~g--------~V~ViD~~~~~------~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g  343 (426)
T 3c75_H          283 -T----YTG--------KIFQADLTAEG------ATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW  343 (426)
T ss_dssp             -B----TTS--------EEEEEEECSSC------EEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT
T ss_pred             -e----CCC--------cEEEEeccCCc------eEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccc
Confidence             3    234        69999987654      21111      00    01111  12578999999988754211  


Q ss_pred             ---CceEEEEEEEcCCCCCC-cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          381 ---PIVQHMYRINIADPTAT-PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       381 ---~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                         .....|.++|+.+  .+ ...+.-        ...-..+.|+|||+.++|+.+.. ...|.++|+.+.+.
T Consensus       344 thk~~s~~VsVID~~T--~kvv~~I~v--------g~~P~gia~spDg~~~lyv~n~~-s~~VsVID~~t~kv  405 (426)
T 3c75_H          344 KHKAASRFVVVLNAET--GERINKIEL--------GHEIDSINVSQDAEPLLYALSAG-TQTLHIYDAATGEE  405 (426)
T ss_dssp             CTTSCEEEEEEEETTT--CCEEEEEEE--------EEEECEEEECCSSSCEEEEEETT-TTEEEEEETTTCCE
T ss_pred             cccCCCCEEEEEECCC--CeEEEEEEC--------CCCcCeEEEccCCCEEEEEEcCC-CCeEEEEECCCCCE
Confidence               0236899999977  33 233322        11355689999999444554432 36799999987544

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.41  E-value=0.00044  Score=68.67  Aligned_cols=230  Identities=9%  Similarity=0.033  Sum_probs=125.1

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|++++++++...... ...+-..+..-..-.++|++++  .+|++...          ...|++++++++..      .
T Consensus        11 ~I~~~~~~g~~~~~~~-~~~~~~~~~~~~~gi~~d~~~~--~ly~~d~~----------~~~I~~~~~~g~~~------~   71 (267)
T 1npe_A           11 KIERLPLERNTMKKTE-AKAFLHIPAKVIIGLAFDCVDK--VVYWTDIS----------EPSIGRASLHGGEP------T   71 (267)
T ss_dssp             EEEEEEESSSCBCGGG-CEEEEEEEEEEEEEEEEETTTT--EEEEEETT----------TTEEEEEESSSCCC------E
T ss_pred             eEEEEEecCccccccc-ceeeecCCCCcEEEEEEecCCC--EEEEEECC----------CCEEEEEecCCCCc------E
Confidence            7999998776310000 0011111111122356777665  34444421          25899999887642      1


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR  303 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  303 (790)
                      .+..                .....-..++++|++..+++++...  ..|++++.++...+.+.....     ......+
T Consensus        72 ~~~~----------------~~~~~p~~ia~d~~~~~lyv~d~~~--~~I~~~~~~g~~~~~~~~~~~-----~~P~~i~  128 (267)
T 1npe_A           72 TIIR----------------QDLGSPEGIALDHLGRTIFWTDSQL--DRIEVAKMDGTQRRVLFDTGL-----VNPRGIV  128 (267)
T ss_dssp             EEEC----------------TTCCCEEEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECSSC-----SSEEEEE
T ss_pred             EEEE----------------CCCCCccEEEEEecCCeEEEEECCC--CEEEEEEcCCCCEEEEEECCC-----CCccEEE
Confidence            1110                1112346788999988777776543  358999988765554432211     1123678


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      ++|++..|++...    ...      ...|+++++++..      .+.+..........++++++++.||+.....    
T Consensus       129 vd~~~g~lyv~~~----~~~------~~~I~~~~~dg~~------~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~----  188 (267)
T 1npe_A          129 TDPVRGNLYWTDW----NRD------NPKIETSHMDGTN------RRILAQDNLGLPNGLTFDAFSSQLCWVDAGT----  188 (267)
T ss_dssp             EETTTTEEEEEEC----CSS------SCEEEEEETTSCC------CEEEECTTCSCEEEEEEETTTTEEEEEETTT----
T ss_pred             EeeCCCEEEEEEC----CCC------CcEEEEEecCCCC------cEEEEECCCCCCcEEEEcCCCCEEEEEECCC----
Confidence            9998888875432    111      2378999987654      3333222222233378999999998887653    


Q ss_pred             EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463          384 QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                      ..|+++++++  ...+.+...       ...-..  ++.|+..++++...  ...|++++.++++
T Consensus       189 ~~I~~~~~~g--~~~~~~~~~-------~~~P~g--i~~d~~~lyva~~~--~~~v~~~d~~~g~  240 (267)
T 1npe_A          189 HRAECLNPAQ--PGRRKVLEG-------LQYPFA--VTSYGKNLYYTDWK--TNSVIAMDLAISK  240 (267)
T ss_dssp             TEEEEEETTE--EEEEEEEEC-------CCSEEE--EEEETTEEEEEETT--TTEEEEEETTTTE
T ss_pred             CEEEEEecCC--CceEEEecC-------CCCceE--EEEeCCEEEEEECC--CCeEEEEeCCCCC
Confidence            4788999876  332222221       111122  33455666554322  3467777776544

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=98.40  E-value=2.4e-05  Score=84.22  Aligned_cols=169  Identities=12%  Similarity=0.163  Sum_probs=95.8

Q ss_pred             CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCc---eeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463          244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGT---CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ  319 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~---~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~  319 (790)
                      .....+..+.|+|++. +++....+.   .|.++|+.++.   ........  .   .....+.|+|+|+.++++.+   
T Consensus       229 ~h~~~v~~v~~~p~~~~~l~s~~~dg---~i~i~d~~~~~~~~~~~~~~~~--~---~~v~~i~~~p~~~~~l~tg~---  297 (430)
T 2xyi_A          229 GHTAVVEDVAWHLLHESLFGSVADDQ---KLMIWDTRNNNTSKPSHTVDAH--T---AEVNCLSFNPYSEFILATGS---  297 (430)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEETTS---EEEEEETTCSCSSSCSEEEECC--S---SCEEEEEECSSCTTEEEEEE---
T ss_pred             CCCCCEeeeEEeCCCCCEEEEEeCCC---eEEEEECCCCCCCcceeEeecC--C---CCeEEEEeCCCCCCEEEEEe---
Confidence            3455688999999655 555544332   38899988763   32222211  1   11447899999997664555   


Q ss_pred             ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCC----
Q psy463          320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPT----  395 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~----  395 (790)
                       .+|        .|.++|+.....    ....+..+...+.. +.|+|+++.+++.+...+  ...||.+...+..    
T Consensus       298 -~dg--------~v~vwd~~~~~~----~~~~~~~h~~~v~~-i~~sp~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~  361 (430)
T 2xyi_A          298 -ADK--------TVALWDLRNLKL----KLHSFESHKDEIFQ-VQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTE  361 (430)
T ss_dssp             -TTS--------EEEEEETTCTTS----CSEEEECCSSCEEE-EEECSSCTTEEEEEETTS--CCEEEEGGGTTCCCCHH
T ss_pred             -CCC--------eEEEEeCCCCCC----CeEEeecCCCCEEE-EEECCCCCCEEEEEeCCC--cEEEEeCCCCccccCcc
Confidence             456        689999876320    13334444444554 899999987666654421  1444444321100    


Q ss_pred             ----CCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          396 ----ATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       396 ----~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                          +..+.+..    ..+....+..+.|+|++++++++.+..  ..|.++++.
T Consensus       362 ~~~~~~~~~~~~----~~~h~~~v~~~~~~p~~~~~l~s~s~d--g~i~iw~~~  409 (430)
T 2xyi_A          362 DAEDGPPELLFI----HGGHTAKISDFSWNPNEPWIICSVSED--NIMQVWQMA  409 (430)
T ss_dssp             HHHHCCTTEEEE----CCCCSSCEEEEEECSSSTTEEEEEETT--SEEEEEEEC
T ss_pred             ccccCCcceEEE----cCCCCCCceEEEECCCCCCEEEEEECC--CCEEEeEcc
Confidence                00122221    112345688899999999655555433  345555543

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=98.39  E-value=9.4e-05  Score=77.15  Aligned_cols=57  Identities=12%  Similarity=0.178  Sum_probs=38.4

Q ss_pred             EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      ++|+||++.|+..+.++     .|...++..  ++.  +..    .......+..+.|||||++++....
T Consensus       279 ~~~sp~~~~l~s~~~dg-----~i~iwd~~~--~~~--~~~----~~~~~~~v~~~~~s~~g~~l~~~s~  335 (368)
T 3mmy_A          279 IAFHPVHGTLATVGSDG-----RFSFWDKDA--RTK--LKT----SEQLDQPISACCFNHNGNIFAYASS  335 (368)
T ss_dssp             EEECTTTCCEEEEETTS-----CEEEEETTT--TEE--EEE----CCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred             EEEecCCCEEEEEccCC-----eEEEEECCC--CcE--EEE----ecCCCCCceEEEECCCCCeEEEEec
Confidence            78999999887776663     455566654  322  211    1114567888999999998877654

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.34  E-value=3.1e-05  Score=85.10  Aligned_cols=220  Identities=11%  Similarity=0.084  Sum_probs=110.1

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEE-EeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCC
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI-LAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  222 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  222 (790)
                      .|.++|+.++.    .....+..+...+..+ ..+.+++..  ++++...          ...|.+.|+.+++.     .
T Consensus       288 tV~lWD~~~~~----~~~~~~~~H~~~V~sv~~~~s~~g~~--~laS~S~----------D~tvklWD~~~~~~-----~  346 (524)
T 2j04_B          288 FVAEFDLTDPE----VPSFYDQVHDSYILSVSTAYSDFEDT--VVSTVAV----------DGYFYIFNPKDIAT-----T  346 (524)
T ss_dssp             EEEEEETTBCS----SCSEEEECSSSCEEEEEEECCTTSCC--EEEEEET----------TSEEEEECGGGHHH-----H
T ss_pred             EEEEEECCCCC----CceEEeecccccEEEEEEEcCCCCCe--EEEEecc----------CCeEEEEECCCCCc-----c
Confidence            78888887552    1122244445556666 355554322  3333321          14677778776542     1


Q ss_pred             ccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeE-EEEEeCCCcccccCCc
Q psy463          223 VPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDV-VFSRDLDRGWFEPFDH  301 (790)
Q Consensus       223 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~-l~~~~~~~~~~~~~~~  301 (790)
                      ..+. +              +.....+..++|||||+.++....+.   .|.+.|+.++.+.. +...   .+   ....
T Consensus       347 ~~~~-~--------------~~~~~~v~~v~fsp~~~~l~s~~~d~---tv~lwd~~~~~~~~~l~gH---~~---~V~s  402 (524)
T 2j04_B          347 KTTV-S--------------RFRGSNLVPVVYCPQIYSYIYSDGAS---SLRAVPSRAAFAVHPLVSR---ET---TITA  402 (524)
T ss_dssp             CEEE-E--------------ECSCCSCCCEEEETTTTEEEEECSSS---EEEEEETTCTTCCEEEEEC---SS---CEEE
T ss_pred             cccc-c--------------ccccCcccceEeCCCcCeEEEeCCCC---cEEEEECcccccceeeecC---CC---ceEE
Confidence            1111 0              01111245689999999655444332   38888998887643 3322   11   1447


Q ss_pred             eeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC-----CeEEeEEEeeecCCCEEEEEE
Q psy463          302 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-----RFTVTEILAWDEKENNVYFLS  376 (790)
Q Consensus       302 ~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-----~~~~~~~~~~s~dg~~l~~~~  376 (790)
                      .+|||||+.|+ +.+    .+|        .|.++++..+.      ...+...     ...+. .++|+|+|+.+.+  
T Consensus       403 va~Sp~g~~l~-Sgs----~Dg--------tv~lwd~~~~~------~~~~~~~~~~~~~~~v~-~v~~sp~g~~~~~--  460 (524)
T 2j04_B          403 IGVSRLHPMVL-AGS----ADG--------SLIITNAARRL------LHGIKNSSATQKSLRLW-KWDYSIKDDKYRI--  460 (524)
T ss_dssp             EECCSSCCBCE-EEE----TTT--------EEECCBSCSST------TTCC------CCCCEEE-ECBCCSSSCEEEE--
T ss_pred             EEeCCCCCeEE-EEE----CCC--------EEEEEechHhh------ccccccCccceeeeEEE-EeccCCCCCeEEc--
Confidence            89999999877 665    456        57777865432      2221111     11122 3678999985432  


Q ss_pred             cCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCc---EEEEEeecCCCCeEEEEecCC
Q psy463          377 TQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVS---YYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       377 ~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~---~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .+.    ..++..+..+  .....+.       +....+..++|||++.   +++...   .-..|.+.++.+
T Consensus       461 ~~~----~~~~~~~~~g--~~~~~l~-------gh~~~V~~Vafsp~~~~~~~lAsg~---~~g~vrlw~l~~  517 (524)
T 2j04_B          461 DSS----YEVYPLTVND--VSKAKID-------AHGINITCTKWNETSAGGKCYAFSN---SAGLLTLEYLSL  517 (524)
T ss_dssp             CCC----CCCCC----------------------CCCSCCCEEECCSTTTTTEEEEEC---TTSEEEEEECSC
T ss_pred             cCC----ceecccccCC--cceeeec-------CCCceEEEEECCCCCCccHHHHhhc---cCceEEEEEccc
Confidence            221    1121111111  1111122       1445677899999964   654432   234455655543

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=98.32  E-value=7.1e-05  Score=77.21  Aligned_cols=202  Identities=10%  Similarity=0.083  Sum_probs=111.6

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEecc-CcceEEEEEECCCCc
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRV-QNRARITRCSINEGT  282 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~-~~~~~i~~~~~~~g~  282 (790)
                      ..|++++.++++.      ..+..                ........+.|+|||++++..... .....|++++.+++.
T Consensus        66 ~~i~~~d~~~~~~------~~~~~----------------~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~  123 (333)
T 2dg1_A           66 GNIFKINPETKEI------KRPFV----------------SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN  123 (333)
T ss_dssp             CEEEEECTTTCCE------EEEEE----------------CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred             CEEEEEeCCCCcE------EEEee----------------CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence            5899999887753      22210                123446788999999944443322 112359999999887


Q ss_pred             eeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEE
Q psy463          283 CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI  362 (790)
Q Consensus       283 ~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~  362 (790)
                      .+.+.......   .....+.++|||+ +++.........+      ...|++++.++++      .+.+..+..... .
T Consensus       124 ~~~~~~~~~~~---~~~~~i~~d~~g~-l~v~~~~~~~~~~------~~~l~~~~~~~~~------~~~~~~~~~~~~-~  186 (333)
T 2dg1_A          124 LQDIIEDLSTA---YCIDDMVFDSKGG-FYFTDFRGYSTNP------LGGVYYVSPDFRT------VTPIIQNISVAN-G  186 (333)
T ss_dssp             CEEEECSSSSC---CCEEEEEECTTSC-EEEEECCCBTTBC------CEEEEEECTTSCC------EEEEEEEESSEE-E
T ss_pred             EEEEEccCccC---CcccceEECCCCC-EEEEeccccccCC------CceEEEEeCCCCE------EEEeecCCCccc-c
Confidence            76444311111   1123678999997 4434331000111      3479999987765      554432211122 3


Q ss_pred             EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc-ccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEE
Q psy463          363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL-TSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIML  441 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~-~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~  441 (790)
                      +.|+|||+.||+.....    ..|+++++.........+..... ... +......+.++++|+.++....   ...|++
T Consensus       187 i~~~~dg~~l~v~~~~~----~~i~~~d~~~~g~~~~~~~~~~~~~~~-~~~~~~~i~~d~~G~l~v~~~~---~~~v~~  258 (333)
T 2dg1_A          187 IALSTDEKVLWVTETTA----NRLHRIALEDDGVTIQPFGATIPYYFT-GHEGPDSCCIDSDDNLYVAMYG---QGRVLV  258 (333)
T ss_dssp             EEECTTSSEEEEEEGGG----TEEEEEEECTTSSSEEEEEEEEEEECC-SSSEEEEEEEBTTCCEEEEEET---TTEEEE
T ss_pred             eEECCCCCEEEEEeCCC----CeEEEEEecCCCcCcccccceEEEecC-CCCCCCceEECCCCCEEEEEcC---CCEEEE
Confidence            78999999888876542    36788887431122222111000 000 1134566889999985544322   246888


Q ss_pred             EecCCCeEEEe
Q psy463          442 FDKTGQRLLYW  452 (790)
Q Consensus       442 ~~~~~~~~~~l  452 (790)
                      ++.+++....+
T Consensus       259 ~d~~g~~~~~~  269 (333)
T 2dg1_A          259 FNKRGYPIGQI  269 (333)
T ss_dssp             ECTTSCEEEEE
T ss_pred             ECCCCCEEEEE
Confidence            88765544443

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=98.32  E-value=6e-05  Score=80.03  Aligned_cols=121  Identities=8%  Similarity=0.008  Sum_probs=69.6

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccC-CCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD-GKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spD-g~~i~~~~~~~~~~~  322 (790)
                      .....+..+.|+|||++++....+.   .|.++++.+++............... .....++++ +..++ +..    .+
T Consensus       243 ~~~~~v~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~----~~  313 (408)
T 4a11_B          243 AHNGKVNGLCFTSDGLHLLTVGTDN---RMRLWNSSNGENTLVNYGKVCNNSKK-GLKFTVSCGCSSEFV-FVP----YG  313 (408)
T ss_dssp             SCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTCCBCCCCCCCCCCCCSS-CCCCEECCSSSSCEE-EEE----ET
T ss_pred             cccCceeEEEEcCCCCEEEEecCCC---eEEEEECCCCccceeccccccccccc-cceeEEecCCCceEE-EEe----cC
Confidence            3455678999999999655554332   28999998876543222110000000 112333333 33344 333    23


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~  390 (790)
                      +        .|.++|+.+++     ....+..+...+.. ++|+||++.|+..+.++.   -.+|.+.
T Consensus       314 ~--------~i~v~d~~~~~-----~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~dg~---i~iw~~~  364 (408)
T 4a11_B          314 S--------TIAVYTVYSGE-----QITMLKGHYKTVDC-CVFQSNFQELYSGSRDCN---ILAWVPS  364 (408)
T ss_dssp             T--------EEEEEETTTCC-----EEEEECCCSSCEEE-EEEETTTTEEEEEETTSC---EEEEEEC
T ss_pred             C--------EEEEEECcCCc-----ceeeeccCCCeEEE-EEEcCCCCEEEEECCCCe---EEEEeCC
Confidence            4        78999998876     23445544445555 899999998877766643   5555543

>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A

Probab=98.32  E-value=8.3e-07  Score=90.82  Aligned_cols=111  Identities=11%  Similarity=-0.008  Sum_probs=72.8

Q ss_pred             cEEEEEcCCCCccc-------cccccc---cchHHHHHhcCCeE---EEEEcCCCCCCChhhhHhhhhccCCccchhHHH
Q psy463          502 PLLIHVYGGPSSFQ-------VTERFS---VDWNLYLADNKDIV---VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQI  568 (790)
Q Consensus       502 p~vv~~HG~~~~~~-------~~~~~~---~~~~~~~~~~~G~~---v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~  568 (790)
                      +.||++||..+...       ....|.   ..+. ..+.++||.   |+.+|++|.+.+...   . ........++++.
T Consensus        41 ~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~-~~L~~~Gy~~~~V~~~D~~g~G~S~~~---~-~~~~~~~~~~~l~  115 (342)
T 2x5x_A           41 TPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVY-AELKARGYNDCEIFGVTYLSSSEQGSA---Q-YNYHSSTKYAIIK  115 (342)
T ss_dssp             CCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHH-HHHHHTTCCTTSEEEECCSCHHHHTCG---G-GCCBCHHHHHHHH
T ss_pred             CeEEEECCcCCCcccccccccccccccccHHHHH-HHHHhCCCCCCeEEEEeCCCCCccCCc---c-ccCCHHHHHHHHH
Confidence            44889999887421       022330   1233 344457998   999999985432111   0 0011123467777


Q ss_pred             HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC--CCCceEEEEEeCCCCC
Q psy463          569 NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD--PSNVFKCGISVAPVTD  621 (790)
Q Consensus       569 ~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~--p~~~~~~~v~~~~~~~  621 (790)
                      +.++.+.++.+   .+++.|+||||||.++..++.++  |. +++.+|+++|...
T Consensus       116 ~~I~~l~~~~g---~~~v~LVGHSmGG~iA~~~a~~~~~p~-~V~~lVlla~p~~  166 (342)
T 2x5x_A          116 TFIDKVKAYTG---KSQVDIVAHSMGVSMSLATLQYYNNWT-SVRKFINLAGGIR  166 (342)
T ss_dssp             HHHHHHHHHHT---CSCEEEEEETHHHHHHHHHHHHHTCGG-GEEEEEEESCCTT
T ss_pred             HHHHHHHHHhC---CCCEEEEEECHHHHHHHHHHHHcCchh-hhcEEEEECCCcc
Confidence            78887776433   47899999999999999999887  54 8999998887654

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=98.30  E-value=0.00059  Score=73.96  Aligned_cols=173  Identities=13%  Similarity=0.073  Sum_probs=100.3

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|.++|+.+++.     ...+.                 .....+..+.|+|||+.++....+.   .|.++|+.++++
T Consensus       290 ~~i~vwd~~~~~~-----~~~~~-----------------~~~~~v~~~~~~~~~~~l~sg~~dg---~i~vwd~~~~~~  344 (464)
T 3v7d_B          290 NTLIVWDVAQMKC-----LYILS-----------------GHTDRIYSTIYDHERKRCISASMDT---TIRIWDLENGEL  344 (464)
T ss_dssp             SCEEEEETTTTEE-----EEEEC-----------------CCSSCEEEEEEETTTTEEEEEETTS---CEEEEETTTTEE
T ss_pred             CeEEEEECCCCcE-----EEEec-----------------CCCCCEEEEEEcCCCCEEEEEeCCC---cEEEEECCCCcE
Confidence            5788888877652     11222                 3456688999999999655554433   299999998876


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEE
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL  363 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~  363 (790)
                      .......  ..   ......|+  ++.|+ +.+    .+|        .|.++|+.+++      .......... ....
T Consensus       345 ~~~~~~h--~~---~v~~~~~~--~~~l~-s~s----~dg--------~v~vwd~~~~~------~~~~~~~~~~-~~~~  397 (464)
T 3v7d_B          345 MYTLQGH--TA---LVGLLRLS--DKFLV-SAA----ADG--------SIRGWDANDYS------RKFSYHHTNL-SAIT  397 (464)
T ss_dssp             EEEECCC--SS---CEEEEEEC--SSEEE-EEE----TTS--------EEEEEETTTCC------EEEEEECTTC-CCEE
T ss_pred             EEEEeCC--CC---cEEEEEEc--CCEEE-EEe----CCC--------cEEEEECCCCc------eeeeecCCCC-ccEE
Confidence            5444221  11   12345665  56665 555    456        68899988765      2221111111 2236


Q ss_pred             eeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEe
Q psy463          364 AWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFD  443 (790)
Q Consensus       364 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~  443 (790)
                      .|+++++.|+..+ +     ..|...++.+  ++...  ..+   ......+..+.|+  ++.++......+.-.++++|
T Consensus       398 ~~~~~~~~l~~~~-d-----g~i~iwd~~~--g~~~~--~~~---~~~~~~v~~v~~~--~~~l~~~~~~~g~~~i~~ld  462 (464)
T 3v7d_B          398 TFYVSDNILVSGS-E-----NQFNIYNLRS--GKLVH--ANI---LKDADQIWSVNFK--GKTLVAAVEKDGQSFLEILD  462 (464)
T ss_dssp             EEEECSSEEEEEE-T-----TEEEEEETTT--CCEEE--SCT---TTTCSEEEEEEEE--TTEEEEEEEETTEEEEEEEE
T ss_pred             EEEeCCCEEEEec-C-----CeEEEEECCC--CcEEe--hhh---ccCCCcEEEEEec--CCEEEEEEEeCCeEEEEEee
Confidence            7899999766654 3     3566677766  43221  100   0134566677776  66777766655544455544

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.28  E-value=0.00026  Score=72.87  Aligned_cols=168  Identities=9%  Similarity=0.021  Sum_probs=82.6

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccC--CCEEEEEEcccccc
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD--GKKMLLILSHNQES  321 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spD--g~~i~~~~~~~~~~  321 (790)
                      .....+..+.|+|||++++....+..   |.+.+..++..+.+....+..+.   .....|+|+  +..|+ +.+    .
T Consensus       151 ~h~~~v~~v~~~p~~~~l~s~s~D~~---i~iW~~~~~~~~~~~~~~~h~~~---v~~~~~~~~~~~~~l~-s~s----~  219 (330)
T 2hes_X          151 EHSQDVKHVIWHPSEALLASSSYDDT---VRIWKDYDDDWECVAVLNGHEGT---VWSSDFDKTEGVFRLC-SGS----D  219 (330)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSC---EEEEEEETTEEEEEEEECCCSSC---EEEEEECCSSSSCEEE-EEE----T
T ss_pred             cCCCceEEEEECCCCCEEEEEcCCCe---EEEEECCCCCeeEEEEccCCCCc---EEEEEecCCCCeeEEE-EEe----C
Confidence            34556889999999996665554332   66666655533333332222222   336889999  55555 555    4


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccC---CCcccccC-CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKD---KVPVPLTR-GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT  397 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~---~~~~~lt~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~  397 (790)
                      ++        .|.++++.++.....   .....+.. +...+.. ++|++++ .|+..+.++.   ..||...  +  ++
T Consensus       220 D~--------~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-v~~s~~~-~l~s~~~dg~---v~iw~~~--~--~~  282 (330)
T 2hes_X          220 DS--------TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYN-VAWGFNG-LIASVGADGV---LAVYEEV--D--GE  282 (330)
T ss_dssp             TS--------CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEE-EEECTTS-CEEEEETTSC---EEEEEEE--T--TE
T ss_pred             CC--------eEEEEEecCCCccccceeEEeeecccccccceEE-EEEcCCC-EEEEEeCCCE---EEEEEcC--C--Cc
Confidence            55        356666544310000   00112222 2333444 7898765 4555555543   5666553  2  22


Q ss_pred             cceeeecccccCCCcc-cEEEEEEec--CCcEEEEEeecCCCCeEEEEecC
Q psy463          398 PECITCDLLTSANQKC-SYSGATFST--NVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       398 ~~~lt~~~~~~~~~~~-~~~~~~~s~--dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      .+.+....   ..... .+..+.|+|  ++++|+.....   ..|.+++++
T Consensus       283 ~~~~~~~~---~~h~~~~v~~v~~~~~~~~~~las~s~D---g~v~~W~~~  327 (330)
T 2hes_X          283 WKVFAKRA---LCHGVYEINVVKWLELNGKTILATGGDD---GIVNFWSLE  327 (330)
T ss_dssp             EEEEEEES---CTTTTSCEEEEEEC-----CCEEEEETT---SEEEEEEC-
T ss_pred             eEEEeccc---cccccceEEEEEEecCCCceEEEEecCC---CcEEEEEec
Confidence            22221100   01222 677889999  67766543222   345565543

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.27  E-value=0.00023  Score=73.14  Aligned_cols=254  Identities=9%  Similarity=0.004  Sum_probs=131.8

Q ss_pred             cCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCC
Q psy463          118 SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGS  197 (790)
Q Consensus       118 pdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (790)
                      .++++++......+            .|.++|..+++     ....++.+.. ... +++++++   .+|++...     
T Consensus        51 ~~~~~lyv~~~~~~------------~v~viD~~t~~-----~~~~i~~~~~-p~~-i~~~~~g---~lyv~~~~-----  103 (328)
T 3dsm_A           51 IRDGIGWIVVNNSH------------VIFAIDINTFK-----EVGRITGFTS-PRY-IHFLSDE---KAYVTQIW-----  103 (328)
T ss_dssp             EETTEEEEEEGGGT------------EEEEEETTTCC-----EEEEEECCSS-EEE-EEEEETT---EEEEEEBS-----
T ss_pred             EECCEEEEEEcCCC------------EEEEEECcccE-----EEEEcCCCCC-CcE-EEEeCCC---eEEEEECC-----
Confidence            35667776664322            79999998874     3344543321 222 2344443   35555421     


Q ss_pred             CCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEE
Q psy463          198 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCS  277 (790)
Q Consensus       198 ~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~  277 (790)
                           ...|+++|+++++..+     .+..+...            ........+.+  +++.++.++.+ ....|.++|
T Consensus       104 -----~~~v~~iD~~t~~~~~-----~i~~g~~~------------~~~~~p~~i~~--~~~~lyv~~~~-~~~~v~viD  158 (328)
T 3dsm_A          104 -----DYRIFIINPKTYEITG-----YIECPDMD------------MESGSTEQMVQ--YGKYVYVNCWS-YQNRILKID  158 (328)
T ss_dssp             -----CSEEEEEETTTTEEEE-----EEECTTCC------------TTTCBCCCEEE--ETTEEEEEECT-TCCEEEEEE
T ss_pred             -----CCeEEEEECCCCeEEE-----EEEcCCcc------------ccCCCcceEEE--ECCEEEEEcCC-CCCEEEEEE
Confidence                 1689999998875321     11100000            00001123344  44433333321 123599999


Q ss_pred             CCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC-CCCCcCcccEEEEEEcCCCCcccCCCcc-cccCC
Q psy463          278 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD-GSTPVDSWDHLTFIDLDDQAGIKDKVPV-PLTRG  355 (790)
Q Consensus       278 ~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~-g~~~~~~~~~l~~~d~~~~~~~~~~~~~-~lt~~  355 (790)
                      +++++.........      ......++|||+ +++...   ... +.........|+++|.++++      .. .+...
T Consensus       159 ~~t~~~~~~i~~g~------~p~~i~~~~dG~-l~v~~~---~~~~~~~~~~~~~~v~~id~~t~~------v~~~~~~~  222 (328)
T 3dsm_A          159 TETDKVVDELTIGI------QPTSLVMDKYNK-MWTITD---GGYEGSPYGYEAPSLYRIDAETFT------VEKQFKFK  222 (328)
T ss_dssp             TTTTEEEEEEECSS------CBCCCEECTTSE-EEEEBC---CBCTTCSSCBCCCEEEEEETTTTE------EEEEEECC
T ss_pred             CCCCeEEEEEEcCC------CccceEEcCCCC-EEEEEC---CCccCCccccCCceEEEEECCCCe------EEEEEecC
Confidence            99987654443211      134788999998 553433   110 00000001479999998776      32 33221


Q ss_pred             CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee-c-
Q psy463          356 RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI-G-  433 (790)
Q Consensus       356 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~-~-  433 (790)
                      .......++++||++.||+...       .|++++.++  ++.....  +..  .+......+.++|++..++.+.. + 
T Consensus       223 ~g~~p~~la~~~d~~~lyv~~~-------~v~~~d~~t--~~~~~~~--~~~--~~~~~p~gi~vdp~~g~lyva~~~~y  289 (328)
T 3dsm_A          223 LGDWPSEVQLNGTRDTLYWINN-------DIWRMPVEA--DRVPVRP--FLE--FRDTKYYGLTVNPNNGEVYVADAIDY  289 (328)
T ss_dssp             TTCCCEEEEECTTSCEEEEESS-------SEEEEETTC--SSCCSSC--SBC--CCSSCEEEEEECTTTCCEEEEECTTS
T ss_pred             CCCCceeEEEecCCCEEEEEcc-------EEEEEECCC--Cceeeee--eec--CCCCceEEEEEcCCCCeEEEEccccc
Confidence            1111233889999998887532       688899876  4432110  000  01235667899997666655431 1 


Q ss_pred             CCCCeEEEEecCCCeEEEe
Q psy463          434 PGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       434 ~~~~~i~~~~~~~~~~~~l  452 (790)
                      .....|++++.+++.+..+
T Consensus       290 ~~~~~V~v~d~~g~~~~~i  308 (328)
T 3dsm_A          290 QQQGIVYRYSPQGKLIDEF  308 (328)
T ss_dssp             SSEEEEEEECTTCCEEEEE
T ss_pred             ccCCEEEEECCCCCEEEEE
Confidence            2256789998885545444

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=98.26  E-value=2.2e-05  Score=91.07  Aligned_cols=258  Identities=11%  Similarity=0.155  Sum_probs=130.7

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCc--ceeEeeeecccceeEE
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANE--SVVAAWVNRVQNRARI   85 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~--~~~~~~~~r~~~~~~~   85 (790)
                      +...++.|||||++||..+ .++...+|.+....+.      .......+...+..+.|+++  +..+.-....   -.+
T Consensus        10 ~~V~~l~~s~dg~~latg~-~dg~I~vwd~~~~~~~------~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D---g~I   79 (753)
T 3jro_A           10 ELIHDAVLDYYGKRLATCS-SDKTIKIFEVEGETHK------LIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKV   79 (753)
T ss_dssp             CCEEEECCCSSSCCEEEEE-TTTEEEEEEEETTEEE------EEEEECCCSSCEEEEEECCTTSCSEEEEEETT---SCE
T ss_pred             ceeEEEEECCCCCeEEEEE-CCCcEEEEecCCCCCc------cceeccCCcCceEEEEecCCCCCCEEEEEeCC---CeE
Confidence            4456788999999988654 4677777766521111      11111222223444566544  3333222221   234


Q ss_pred             EEeeCCCCeeeEEEeecCCCCccccCCccccccC--CceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCccee
Q psy463           86 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD--GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  163 (790)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~  163 (790)
                      .+++..++.+..+.........+   ....|+|+  |+.++..+ .+            +.|.++++.++..   .....
T Consensus        80 ~vwd~~~~~~~~~~~~~~h~~~V---~~v~~sp~~~~~~l~sgs-~d------------g~I~vwdl~~~~~---~~~~~  140 (753)
T 3jro_A           80 LIWKEENGRWSQIAVHAVHSASV---NSVQWAPHEYGPLLLVAS-SD------------GKVSVVEFKENGT---TSPII  140 (753)
T ss_dssp             EEEEEETTEEEEEEEECCCSSCE---EEEEECCGGGCSEEEEEE-TT------------SEEEEEECCSSSC---CCCEE
T ss_pred             EEEECCCCcccccccccCCCCCe---EEEEECCCCCCCEEEEEe-CC------------CcEEEEEeecCCC---cceeE
Confidence            55555555533333322222111   34589999  77766543 22            2788888876631   11222


Q ss_pred             ccccceEEEEEEeeecc------------CCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccc
Q psy463          164 LTRGRFTVTEILAWDER------------ENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT  231 (790)
Q Consensus       164 lt~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~  231 (790)
                      +......+.. ..|++.            ++. .++...           ....|.++|+.++..... ....+.     
T Consensus       141 ~~~~~~~v~~-l~~~p~~~~~~~~~~~~~d~~-~l~sgs-----------~dg~I~iwd~~~~~~~~~-~~~~~~-----  201 (753)
T 3jro_A          141 IDAHAIGVNS-ASWAPATIEEDGEHNGTKESR-KFVTGG-----------ADNLVKIWKYNSDAQTYV-LESTLE-----  201 (753)
T ss_dssp             EECCSSCEEE-EEECCCC---------CGGGC-CEEEEE-----------TTSCEEEEEEETTTTEEE-EEEEEC-----
T ss_pred             eecCCCceEE-EEecCcccccccccccCCCCC-EEEEEE-----------CCCeEEEEeccCCcccce-eeeeec-----
Confidence            2222223332 345552            121 222221           125677777766531100 011222     


Q ss_pred             eeehhhcccCCCCCCCEEEEEEEccC---CcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCC
Q psy463          232 VTEILAWDEKENNVEPVLSRVNWANE---SVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDG  308 (790)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~wspD---g~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg  308 (790)
                                  .....+..+.|+||   |++++....+.   .|.++++.++......................|+|||
T Consensus       202 ------------~h~~~V~~l~~sp~~~~~~~l~s~s~Dg---~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg  266 (753)
T 3jro_A          202 ------------GHSDWVRDVAWSPTVLLRSYLASVSQDR---TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG  266 (753)
T ss_dssp             ------------CCSSCEEEEEECCCCSSSEEEEEEESSS---CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT
T ss_pred             ------------CCCCcEEEEEeccCCCCCCEEEEEecCC---EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC
Confidence                        44567889999999   77665554432   2777787776421111100001111224578999999


Q ss_pred             CEEEEEEccccccCCCCCcCcccEEEEEEcCCC
Q psy463          309 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQ  341 (790)
Q Consensus       309 ~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~  341 (790)
                      +.|+ +.+    .+|        .|.++++..+
T Consensus       267 ~~l~-s~s----~Dg--------~I~vwd~~~~  286 (753)
T 3jro_A          267 NVLA-LSG----GDN--------KVTLWKENLE  286 (753)
T ss_dssp             CCEE-EEC----SSS--------CEECCBCCSS
T ss_pred             CEEE-EEc----CCC--------EEEEEecCCC
Confidence            9887 555    456        5788887654

>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39

Probab=98.26  E-value=3e-06  Score=74.00  Aligned_cols=94  Identities=9%  Similarity=-0.077  Sum_probs=61.9

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++....          +.|.||++| +  .   ...|...     ++ .+|.|+.+|++|++.+.....      
T Consensus        10 ~g~~~~~~~~g----------~~~~vv~~H-~--~---~~~~~~~-----l~-~~~~v~~~d~~G~G~s~~~~~------   61 (131)
T 2dst_A           10 YGLNLVFDRVG----------KGPPVLLVA-E--E---ASRWPEA-----LP-EGYAFYLLDLPGYGRTEGPRM------   61 (131)
T ss_dssp             TTEEEEEEEEC----------CSSEEEEES-S--S---GGGCCSC-----CC-TTSEEEEECCTTSTTCCCCCC------
T ss_pred             CCEEEEEEEcC----------CCCeEEEEc-C--C---HHHHHHH-----Hh-CCcEEEEECCCCCCCCCCCCC------
Confidence            67777655431          136789999 2  1   2223322     44 469999999999776432210      


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS  607 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~  607 (790)
                         . +++..+.+..+.+..   +.+++.++||||||.+++.++.++|.
T Consensus        62 ---~-~~~~~~~~~~~~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~  103 (131)
T 2dst_A           62 ---A-PEELAHFVAGFAVMM---NLGAPWVLLRGLGLALGPHLEALGLR  103 (131)
T ss_dssp             ---C-HHHHHHHHHHHHHHT---TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred             ---C-HHHHHHHHHHHHHHc---CCCccEEEEEChHHHHHHHHHhcCCc
Confidence               1 555555555555533   34689999999999999999998873

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.25  E-value=0.00016  Score=71.85  Aligned_cols=166  Identities=13%  Similarity=0.146  Sum_probs=104.2

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ....+.|+|+++.+++++...  ..|++++++++..+.+....    .. .....+++|+++.|++.-.      +    
T Consensus        37 ~~~gi~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~----~~-~p~~ia~d~~~~~lyv~d~------~----   99 (267)
T 1npe_A           37 VIIGLAFDCVDKVVYWTDISE--PSIGRASLHGGEPTTIIRQD----LG-SPEGIALDHLGRTIFWTDS------Q----   99 (267)
T ss_dssp             EEEEEEEETTTTEEEEEETTT--TEEEEEESSSCCCEEEECTT----CC-CEEEEEEETTTTEEEEEET------T----
T ss_pred             cEEEEEEecCCCEEEEEECCC--CEEEEEecCCCCcEEEEECC----CC-CccEEEEEecCCeEEEEEC------C----
Confidence            456889999988888877643  34999999877655443211    11 1346889999888885332      2    


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLT  407 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~  407 (790)
                        ...|+++++++..      .+.+..........++++|+++.||+......  ...|+++++++  ...+.+...   
T Consensus       100 --~~~I~~~~~~g~~------~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~--~~~I~~~~~dg--~~~~~~~~~---  164 (267)
T 1npe_A          100 --LDRIEVAKMDGTQ------RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRD--NPKIETSHMDG--TNRRILAQD---  164 (267)
T ss_dssp             --TTEEEEEETTSCS------CEEEECSSCSSEEEEEEETTTTEEEEEECCSS--SCEEEEEETTS--CCCEEEECT---
T ss_pred             --CCEEEEEEcCCCC------EEEEEECCCCCccEEEEeeCCCEEEEEECCCC--CcEEEEEecCC--CCcEEEEEC---
Confidence              2479999987654      33332222111223789998888988765411  15788998876  333333221   


Q ss_pred             cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          408 SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                         +...-..+.++++++.++++...  ...|++++.++...+
T Consensus       165 ---~~~~P~gia~d~~~~~lyv~d~~--~~~I~~~~~~g~~~~  202 (267)
T 1npe_A          165 ---NLGLPNGLTFDAFSSQLCWVDAG--THRAECLNPAQPGRR  202 (267)
T ss_dssp             ---TCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTEEEEE
T ss_pred             ---CCCCCcEEEEcCCCCEEEEEECC--CCEEEEEecCCCceE
Confidence               22345678899998888766433  357888888765443

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=98.25  E-value=4.5e-05  Score=78.11  Aligned_cols=75  Identities=13%  Similarity=0.178  Sum_probs=45.5

Q ss_pred             CceeEccCC----CEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEE
Q psy463          300 DHLRFSSDG----KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFL  375 (790)
Q Consensus       300 ~~~~~spDg----~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~  375 (790)
                      ...+|+||+    +.|+ +.+    .+|        .|.++++++.... ....+.+......+.. ++|+|||+.|+..
T Consensus       216 ~~v~~sp~~~~~~~~la-s~s----~D~--------~v~iw~~~~~~~~-~~~~~~~~~~~~~v~~-v~~sp~g~~las~  280 (316)
T 3bg1_A          216 RDVAWAPSIGLPTSTIA-SCS----QDG--------RVFIWTCDDASSN-TWSPKLLHKFNDVVWH-VSWSITANILAVS  280 (316)
T ss_dssp             EEEECCCCSSCSCCEEE-EEE----TTC--------EEEEEECSSTTCC-CCBCCEEEECSSCEEE-EEECTTTCCEEEE
T ss_pred             EEEEecCCCCCCCceEE-EEc----CCC--------eEEEEEccCcccc-chhhhhhhcCCCcEEE-EEEcCCCCEEEEE
Confidence            478999997    5565 665    566        6788887652100 0001222222223443 8899999988877


Q ss_pred             EcCCCCceEEEEEEEcC
Q psy463          376 STQGSPIVQHMYRINIA  392 (790)
Q Consensus       376 ~~~~~~~~~~l~~~~~~  392 (790)
                      +.++.   .+||.....
T Consensus       281 ~~D~~---v~lw~~~~~  294 (316)
T 3bg1_A          281 GGDNK---VTLWKESVD  294 (316)
T ss_dssp             ESSSC---EEEEEECTT
T ss_pred             cCCCe---EEEEEECCC
Confidence            77654   778877654

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.25  E-value=5.6e-05  Score=78.24  Aligned_cols=267  Identities=8%  Similarity=0.029  Sum_probs=132.2

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      ...|||+++|.........        ...++++|.++++     +...+.-|...  . +.++++++  .+|+......
T Consensus        39 ~~~pd~~~vyV~~~~~~~~--------~~~V~ViD~~t~~-----v~~~I~vG~~P--~-va~spDG~--~lyVan~~~~  100 (386)
T 3sjl_D           39 APAPDARRVYVNDPAHFAA--------VTQQFVIDGEAGR-----VIGMIDGGFLP--N-PVVADDGS--FIAHASTVFS  100 (386)
T ss_dssp             CCCCCTTEEEEEECGGGCS--------SEEEEEEETTTTE-----EEEEEEECSSC--E-EEECTTSS--CEEEEEEEEE
T ss_pred             ccCCCCCEEEEEcCcccCC--------CCEEEEEECCCCe-----EEEEEECCCCC--c-EEECCCCC--EEEEEccccc
Confidence            3479999988766431100        1389999998874     45556555444  3 67888887  4555542110


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT  274 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~  274 (790)
                      .+.+ -+....|.++|.++++....   ..+-.|...            .....-..+.+||||++++..+... ...+.
T Consensus       101 r~~~-G~~~~~VsviD~~t~~v~~~---I~v~~g~r~------------~~g~~P~~~a~spDGk~lyVan~~~-~~~Vs  163 (386)
T 3sjl_D          101 RIAR-GERTDYVEVFDPVTLLPTAD---IELPDAPRF------------LVGTYPWMTSLTPDGKTLLFYQFSP-APAVG  163 (386)
T ss_dssp             ETTE-EEEEEEEEEECTTTCCEEEE---EEETTCCCC------------CBSCCGGGEEECTTSSEEEEEECSS-SCEEE
T ss_pred             cccc-CCCCCEEEEEECCCCeEEEE---EECCCcccc------------ccCCCCceEEEcCCCCEEEEEEcCC-CCeEE
Confidence            0000 00125689999988763221   000000000            0001122478999999777776531 23499


Q ss_pred             EEECCCCceeEEEEEeCCCcc-cccC---CceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463          275 RCSINEGTCDVVFSRDLDRGW-FEPF---DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  350 (790)
Q Consensus       275 ~~~~~~g~~~~l~~~~~~~~~-~~~~---~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~  350 (790)
                      ++|+++++...-....+  .+ ..+.   .....++||+.++ +..   +..+        ++-  +..+ +        
T Consensus       164 VID~~t~~vv~tI~v~g--~~~~~P~g~~~~~~~~~DG~~~~-v~~---~~~g--------~v~--~~~~-~--------  218 (386)
T 3sjl_D          164 VVDLEGKAFKRMLDVPD--CYHIFPTAPDTFFMHCRDGSLAK-VAF---GTEG--------TPE--ITHT-E--------  218 (386)
T ss_dssp             EEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSCEEE-EEC---CSSS--------CCE--EEEC-C--------
T ss_pred             EEECCCCcEEEEEECCC--cceeecCCCceeEEECCCCCEEE-EEC---CCCC--------eEE--Eeec-c--------
Confidence            99999987644332211  00 0000   1135677776554 333   1223        111  1001 1        


Q ss_pred             cccCCCeEEeEEEeee-cCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeec-cccc----CC-CcccEEEEEEecC
Q psy463          351 PLTRGRFTVTEILAWD-EKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCD-LLTS----AN-QKCSYSGATFSTN  423 (790)
Q Consensus       351 ~lt~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~-~~~~----~~-~~~~~~~~~~s~d  423 (790)
                      .+......+...+.|+ +|| +++|.+..     ..+|.+++.+  ...+.+... +...    .+ .........++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~dG-~~~~vs~~-----g~V~v~d~~~--~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~  290 (386)
T 3sjl_D          219 VFHPEDEFLINHPAYSQKAG-RLVWPTYT-----GKIHQIDLSS--GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA  290 (386)
T ss_dssp             CCSCTTSCBCSCCEEETTTT-EEEEEBTT-----SEEEEEECTT--SSCEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred             eeccccccccccceeEcCCC-cEEEEeCC-----CEEEEEECCC--CcceeecceeccccccccccccCCCcceeeECCC
Confidence            1101111111114565 566 46676654     4799999876  332222110 0000    00 0112223677999


Q ss_pred             CcEEEEEeecC------C-CCeEEEEecCCCeE
Q psy463          424 VSYYVLSCIGP------G-IPEIMLFDKTGQRL  449 (790)
Q Consensus       424 g~~~~~~~~~~------~-~~~i~~~~~~~~~~  449 (790)
                      ++.++......      + ..+|+++|+++++.
T Consensus       291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv  323 (386)
T 3sjl_D          291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER  323 (386)
T ss_dssp             TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred             CCeEEEEeccccccccCCCCCEEEEEECCCCeE
Confidence            99887765321      1 35799999988554

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=98.24  E-value=0.0008  Score=72.46  Aligned_cols=160  Identities=9%  Similarity=0.033  Sum_probs=92.0

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ....+..+.|  ||+.++....+.   .|.++|+.++++.......  .     ..-..++++++.|+ +.+    .+| 
T Consensus       278 ~~~~v~~~~~--~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~--~-----~~v~~~~~~~~~l~-~~~----~dg-  339 (445)
T 2ovr_B          278 HTNRVYSLQF--DGIHVVSGSLDT---SIRVWDVETGNCIHTLTGH--Q-----SLTSGMELKDNILV-SGN----ADS-  339 (445)
T ss_dssp             CSSCEEEEEE--CSSEEEEEETTS---CEEEEETTTCCEEEEECCC--C-----SCEEEEEEETTEEE-EEE----TTS-
T ss_pred             CCCceEEEEE--CCCEEEEEeCCC---eEEEEECCCCCEEEEEcCC--c-----ccEEEEEEeCCEEE-EEe----CCC-
Confidence            3445667777  888555554432   2899999888765443221  1     11245566788666 554    455 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccC---CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ce
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTR---GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-EC  400 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~  400 (790)
                             .|.++|+.+++     ....+..   ....+.. ++|  +++.|+..+.+     ..|...++..  ++. ..
T Consensus       340 -------~i~vwd~~~~~-----~~~~~~~~~~~~~~v~~-~~~--~~~~l~s~~~d-----g~v~iwd~~~--~~~~~~  397 (445)
T 2ovr_B          340 -------TVKIWDIKTGQ-----CLQTLQGPNKHQSAVTC-LQF--NKNFVITSSDD-----GTVKLWDLKT--GEFIRN  397 (445)
T ss_dssp             -------CEEEEETTTCC-----EEEEECSTTSCSSCEEE-EEE--CSSEEEEEETT-----SEEEEEETTT--CCEEEE
T ss_pred             -------eEEEEECCCCc-----EEEEEccCCCCCCCEEE-EEE--CCCEEEEEeCC-----CeEEEEECCC--Cceeee
Confidence                   58899987776     1333432   2233333 556  45666666555     3566667665  332 22


Q ss_pred             eeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecCC
Q psy463          401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKTG  446 (790)
Q Consensus       401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~  446 (790)
                      +...  ........+..+.|+|++.+++....... ...++++|.+.
T Consensus       398 ~~~~--~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~  442 (445)
T 2ovr_B          398 LVTL--ESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  442 (445)
T ss_dssp             EEEC--TTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             eecc--ccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence            2110  00113456788999999998877654443 56688887653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.24  E-value=0.00018  Score=75.77  Aligned_cols=185  Identities=14%  Similarity=0.081  Sum_probs=119.7

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|++++++++..      ..+.                 ........+.|.+.+..++|++...  ..|++++++++..
T Consensus        96 ~~I~~i~~~~~~~------~~~~-----------------~~~~~~~gl~~d~~~~~ly~~D~~~--~~I~r~~~~g~~~  150 (386)
T 3v65_B           96 IDIRQVLPHRSEY------TLLL-----------------NNLENAIALDFHHRRELVFWSDVTL--DRILRANLNGSNV  150 (386)
T ss_dssp             SCEEEECTTSCCC------EEEE-----------------CSCSCEEEEEEETTTTEEEEEETTT--TEEEEEETTSCCE
T ss_pred             ccceeeccCCCcE------EEEe-----------------cCCCccEEEEEecCCCeEEEEeCCC--CcEEEEecCCCCc
Confidence            6789999887652      2222                 2233456789999888888887543  3599999998776


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEE
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL  363 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~  363 (790)
                      +.+......     ....+++.+.+..||+.-.      +      ...|++++++++.      .+.+..........+
T Consensus       151 ~~~~~~~~~-----~p~glavd~~~g~lY~~d~------~------~~~I~~~~~dg~~------~~~l~~~~l~~P~gi  207 (386)
T 3v65_B          151 EEVVSTGLE-----SPGGLAVDWVHDKLYWTDS------G------TSRIEVANLDGAH------RKVLLWQSLEKPRAI  207 (386)
T ss_dssp             EEEECSSCS-----CCCCEEEETTTTEEEEEET------T------TTEEEECBTTSCS------CEEEECSSCSCEEEE
T ss_pred             EEEEeCCCC-----CccEEEEEeCCCeEEEEcC------C------CCeEEEEeCCCCc------eEEeecCCCCCCcEE
Confidence            655432211     1346888988888885433      2      3479999988765      444433222222337


Q ss_pred             eeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEe
Q psy463          364 AWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFD  443 (790)
Q Consensus       364 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~  443 (790)
                      +++|+++.||++.....   ..|+++++++  ...+.+...      +...-..++++++++.|+++...  ...|++++
T Consensus       208 avdp~~g~ly~td~~~~---~~I~r~~~dG--~~~~~~~~~------~~~~PnGlavd~~~~~lY~aD~~--~~~I~~~d  274 (386)
T 3v65_B          208 ALHPMEGTIYWTDWGNT---PRIEASSMDG--SGRRIIADT------HLFWPNGLTIDYAGRRMYWVDAK--HHVIERAN  274 (386)
T ss_dssp             EEETTTTEEEEEECSSS---CEEEEEETTS--CSCEEEECS------SCSCEEEEEEEGGGTEEEEEETT--TTEEEEEC
T ss_pred             EEEcCCCeEEEeccCCC---CEEEEEeCCC--CCcEEEEEC------CCCCeeeEEEeCCCCEEEEEECC--CCEEEEEe
Confidence            88999998998865532   5899999987  343333321      22345678999998888776432  45789999


Q ss_pred             cCCCeE
Q psy463          444 KTGQRL  449 (790)
Q Consensus       444 ~~~~~~  449 (790)
                      +++...
T Consensus       275 ~dG~~~  280 (386)
T 3v65_B          275 LDGSHR  280 (386)
T ss_dssp             TTSCSC
T ss_pred             CCCCee
Confidence            887543

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=98.23  E-value=0.00073  Score=73.21  Aligned_cols=151  Identities=10%  Similarity=0.089  Sum_probs=93.3

Q ss_pred             EEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccE
Q psy463          253 NWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDH  332 (790)
Q Consensus       253 ~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~  332 (790)
                      .++++|+.++....+.   .|.++|+.++++.......  .   .......|+|||+.|+ +.+    .+|        .
T Consensus       275 ~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~l~-sg~----~dg--------~  333 (464)
T 3v7d_B          275 TVSGHGNIVVSGSYDN---TLIVWDVAQMKCLYILSGH--T---DRIYSTIYDHERKRCI-SAS----MDT--------T  333 (464)
T ss_dssp             EEEEETTEEEEEETTS---CEEEEETTTTEEEEEECCC--S---SCEEEEEEETTTTEEE-EEE----TTS--------C
T ss_pred             EEcCCCCEEEEEeCCC---eEEEEECCCCcEEEEecCC--C---CCEEEEEEcCCCCEEE-EEe----CCC--------c
Confidence            4578888655554433   2899999888765444221  1   1234789999999887 555    455        5


Q ss_pred             EEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCc
Q psy463          333 LTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQK  412 (790)
Q Consensus       333 l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~  412 (790)
                      |.++|+.+++     ....+..+...+.. +.|+  ++.|+..+.+     ..|...++..  ++......       ..
T Consensus       334 i~vwd~~~~~-----~~~~~~~h~~~v~~-~~~~--~~~l~s~s~d-----g~v~vwd~~~--~~~~~~~~-------~~  391 (464)
T 3v7d_B          334 IRIWDLENGE-----LMYTLQGHTALVGL-LRLS--DKFLVSAAAD-----GSIRGWDAND--YSRKFSYH-------HT  391 (464)
T ss_dssp             EEEEETTTTE-----EEEEECCCSSCEEE-EEEC--SSEEEEEETT-----SEEEEEETTT--CCEEEEEE-------CT
T ss_pred             EEEEECCCCc-----EEEEEeCCCCcEEE-EEEc--CCEEEEEeCC-----CcEEEEECCC--Cceeeeec-------CC
Confidence            8899998776     23445444444443 6665  5666666655     3566666655  22211111       22


Q ss_pred             ccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          413 CSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       413 ~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                      .......+++++++++...    -..+.++++.+++..
T Consensus       392 ~~~~~~~~~~~~~~l~~~~----dg~i~iwd~~~g~~~  425 (464)
T 3v7d_B          392 NLSAITTFYVSDNILVSGS----ENQFNIYNLRSGKLV  425 (464)
T ss_dssp             TCCCEEEEEECSSEEEEEE----TTEEEEEETTTCCEE
T ss_pred             CCccEEEEEeCCCEEEEec----CCeEEEEECCCCcEE
Confidence            3445578999999887654    247899998876544

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=98.23  E-value=3.8e-05  Score=89.07  Aligned_cols=251  Identities=11%  Similarity=0.105  Sum_probs=133.5

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccC-CccEEEEecc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERE-NNPLLILSHN  191 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~-~~~~~~~~~~  191 (790)
                      ...|+|||+.|+..+. +            +.|.++++.++..   +....+..+...+.. +.|.++. ++ .++... 
T Consensus        14 ~l~~s~dg~~latg~~-d------------g~I~vwd~~~~~~---~~~~~l~~h~~~V~~-l~~s~~~~~~-~l~s~s-   74 (753)
T 3jro_A           14 DAVLDYYGKRLATCSS-D------------KTIKIFEVEGETH---KLIDTLTGHEGPVWR-VDWAHPKFGT-ILASCS-   74 (753)
T ss_dssp             EECCCSSSCCEEEEET-T------------TEEEEEEEETTEE---EEEEEECCCSSCEEE-EEECCTTSCS-EEEEEE-
T ss_pred             EEEECCCCCeEEEEEC-C------------CcEEEEecCCCCC---ccceeccCCcCceEE-EEecCCCCCC-EEEEEe-
Confidence            3588999998775432 2            2677777654320   112233333333333 3555442 22 333222 


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccC--CcEEEEEeccCc
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANE--SVVAAWVNRVQN  269 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~~~~~~r~~~  269 (790)
                                ....|.+.++.+++...   ...+.                 .....+..+.|+|+  |+.++....+. 
T Consensus        75 ----------~Dg~I~vwd~~~~~~~~---~~~~~-----------------~h~~~V~~v~~sp~~~~~~l~sgs~dg-  123 (753)
T 3jro_A           75 ----------YDGKVLIWKEENGRWSQ---IAVHA-----------------VHSASVNSVQWAPHEYGPLLLVASSDG-  123 (753)
T ss_dssp             ----------TTSCEEEEEEETTEEEE---EEEEC-----------------CCSSCEEEEEECCGGGCSEEEEEETTS-
T ss_pred             ----------CCCeEEEEECCCCcccc---ccccc-----------------CCCCCeEEEEECCCCCCCEEEEEeCCC-
Confidence                      11467777877764111   11122                 44567889999999  88666655433 


Q ss_pred             ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEcc-------------CCCEEEEEEccccccCCCCCcCcccEEEEE
Q psy463          270 RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS-------------DGKKMLLILSHNQESDGSTPVDSWDHLTFI  336 (790)
Q Consensus       270 ~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-------------Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~  336 (790)
                        .|.++|+.++.............   ......|+|             ||+.|+ +.+    .+|        .|.++
T Consensus       124 --~I~vwdl~~~~~~~~~~~~~~~~---~v~~l~~~p~~~~~~~~~~~~~d~~~l~-sgs----~dg--------~I~iw  185 (753)
T 3jro_A          124 --KVSVVEFKENGTTSPIIIDAHAI---GVNSASWAPATIEEDGEHNGTKESRKFV-TGG----ADN--------LVKIW  185 (753)
T ss_dssp             --EEEEEECCSSSCCCCEEEECCSS---CEEEEEECCCC---------CGGGCCEE-EEE----TTS--------CEEEE
T ss_pred             --cEEEEEeecCCCcceeEeecCCC---ceEEEEecCcccccccccccCCCCCEEE-EEE----CCC--------eEEEE
Confidence              38888888764322211111111   134688898             588776 555    456        57788


Q ss_pred             EcCCCCcccCCCcccccCCCeEEeEEEeeecC---CCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCc
Q psy463          337 DLDDQAGIKDKVPVPLTRGRFTVTEILAWDEK---ENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQK  412 (790)
Q Consensus       337 d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~d---g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~  412 (790)
                      |+.++.... .....+..+...+.. ++|+|+   ++.++..+.++.   ..+|.+....  ... ..+..    .....
T Consensus       186 d~~~~~~~~-~~~~~~~~h~~~V~~-l~~sp~~~~~~~l~s~s~Dg~---I~iwd~~~~~--~~~~~~~~~----~~~~~  254 (753)
T 3jro_A          186 KYNSDAQTY-VLESTLEGHSDWVRD-VAWSPTVLLRSYLASVSQDRT---CIIWTQDNEQ--GPWKKTLLK----EEKFP  254 (753)
T ss_dssp             EEETTTTEE-EEEEEECCCSSCEEE-EEECCCCSSSEEEEEEESSSC---EEEEEESSSS--SCCBCCBSS----SSCCS
T ss_pred             eccCCcccc-eeeeeecCCCCcEEE-EEeccCCCCCCEEEEEecCCE---EEEecCCCCC--CcceeEEec----cCCCC
Confidence            876553000 001233434444554 899999   776666665543   4555443321  111 11111    11134


Q ss_pred             ccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          413 CSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       413 ~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      ..+..+.|+|+|++++....   -..|.++++.
T Consensus       255 ~~v~~l~~spdg~~l~s~s~---Dg~I~vwd~~  284 (753)
T 3jro_A          255 DVLWRASWSLSGNVLALSGG---DNKVTLWKEN  284 (753)
T ss_dssp             SCCCCEEECTTTCCEEEECS---SSCEECCBCC
T ss_pred             CceEEEEEcCCCCEEEEEcC---CCEEEEEecC
Confidence            45667899999998766533   2346777765

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.23  E-value=0.00095  Score=69.09  Aligned_cols=181  Identities=10%  Similarity=0.073  Sum_probs=107.8

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|+++++++..      ...+..+... ..-++||+.++  .+|++...          ...|++++++++..+.+    
T Consensus        54 ~I~~i~~~g~~------~~~~~~~~~~-~~~l~~d~~~~--~ly~~D~~----------~~~I~r~~~~g~~~~~~----  110 (349)
T 3v64_C           54 DIRQVLPHRSE------YTLLLNNLEN-AIALDFHHRRE--LVFWSDVT----------LDRILRANLNGSNVEEV----  110 (349)
T ss_dssp             CEEEECTTSCC------EEEEECSCSC-EEEEEEETTTT--EEEEEETT----------TTEEEEEETTSCSCEEE----
T ss_pred             ceEEEeCCCCe------eEEeecCCCc-eEEEEEecccc--EEEEEecc----------CCceEEEecCCCCceEE----
Confidence            68888887653      2222222111 23357777665  34444321          25899999987652221    


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR  303 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  303 (790)
                       +.                 .....-..+++.+.+..++|++...  ..|.++++++...+.+......     .....+
T Consensus       111 -~~-----------------~~~~~p~glavd~~~g~ly~~d~~~--~~I~~~~~dG~~~~~l~~~~l~-----~P~~ia  165 (349)
T 3v64_C          111 -VS-----------------TGLESPGGLAVDWVHDKLYWTDSGT--SRIEVANLDGAHRKVLLWQSLE-----KPRAIA  165 (349)
T ss_dssp             -EC-----------------SSCSCCCEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECTTCS-----CEEEEE
T ss_pred             -Ee-----------------CCCCCccEEEEecCCCeEEEEcCCC--CeEEEEcCCCCceEEEEeCCCC-----CcceEE
Confidence             01                 1111123466777777777776543  2599999987765555432111     123678


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      +.|++..|+++-.     ..      ...|+++++++..      .+.+..........++++|+++.||+.....    
T Consensus       166 vdp~~g~ly~td~-----~~------~~~I~r~~~dG~~------~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~----  224 (349)
T 3v64_C          166 LHPMEGTIYWTDW-----GN------TPRIEASSMDGSG------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKH----  224 (349)
T ss_dssp             EETTTTEEEEEEC-----SS------SCEEEEEETTSCS------CEESCCSSCSCEEEEEEETTTTEEEEEETTT----
T ss_pred             EecCcCeEEEecc-----CC------CCEEEEEeCCCCC------cEEEEECCCCCcceEEEeCCCCEEEEEECCC----
Confidence            9998888875433     11      2479999998765      4444332222233389999999999986553    


Q ss_pred             EEEEEEEcCC
Q psy463          384 QHMYRINIAD  393 (790)
Q Consensus       384 ~~l~~~~~~~  393 (790)
                      ..|+++++++
T Consensus       225 ~~I~~~~~dG  234 (349)
T 3v64_C          225 HVIERANLDG  234 (349)
T ss_dssp             TEEEEEETTS
T ss_pred             CEEEEEeCCC
Confidence            4799999887

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.22  E-value=0.00026  Score=73.31  Aligned_cols=164  Identities=14%  Similarity=0.119  Sum_probs=108.0

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ....+.|.+.+..++|++...+  .|++++++++..+.+......     ....+++.+.+..||+.-.      +    
T Consensus        74 ~~~~l~~d~~~~~ly~~D~~~~--~I~r~~~~g~~~~~~~~~~~~-----~p~glavd~~~g~ly~~d~------~----  136 (349)
T 3v64_C           74 NAIALDFHHRRELVFWSDVTLD--RILRANLNGSNVEEVVSTGLE-----SPGGLAVDWVHDKLYWTDS------G----  136 (349)
T ss_dssp             CEEEEEEETTTTEEEEEETTTT--EEEEEETTSCSCEEEECSSCS-----CCCEEEEETTTTEEEEEET------T----
T ss_pred             ceEEEEEeccccEEEEEeccCC--ceEEEecCCCCceEEEeCCCC-----CccEEEEecCCCeEEEEcC------C----
Confidence            3567899998888888875433  599999998876655432111     1346888888888885443      2    


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLT  407 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~  407 (790)
                        ...|+++++++..      .+.+..........++++|+++.||++.....   ..|+++++++  ...+.+...   
T Consensus       137 --~~~I~~~~~dG~~------~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~---~~I~r~~~dG--~~~~~~~~~---  200 (349)
T 3v64_C          137 --TSRIEVANLDGAH------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT---PRIEASSMDG--SGRRIIADT---  200 (349)
T ss_dssp             --TTEEEEEETTSCS------CEEEECTTCSCEEEEEEETTTTEEEEEECSSS---CEEEEEETTS--CSCEESCCS---
T ss_pred             --CCeEEEEcCCCCc------eEEEEeCCCCCcceEEEecCcCeEEEeccCCC---CEEEEEeCCC--CCcEEEEEC---
Confidence              3479999988765      44443322222233789998888998865532   5899999987  333333221   


Q ss_pred             cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          408 SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                         +...-..++++++++.|+++...  ...|+++++++...
T Consensus       201 ---~~~~PnGla~d~~~~~lY~aD~~--~~~I~~~~~dG~~~  237 (349)
T 3v64_C          201 ---HLFWPNGLTIDYAGRRMYWVDAK--HHVIERANLDGSHR  237 (349)
T ss_dssp             ---SCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSC
T ss_pred             ---CCCCcceEEEeCCCCEEEEEECC--CCEEEEEeCCCCce
Confidence               22345678999998888776432  45889999887543

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=98.18  E-value=0.00018  Score=73.58  Aligned_cols=164  Identities=12%  Similarity=0.125  Sum_probs=84.9

Q ss_pred             CCCEEEEEEEccC--CcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCC--------------
Q psy463          245 VEPVLSRVNWANE--SVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDG--------------  308 (790)
Q Consensus       245 ~~~~~~~~~wspD--g~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg--------------  308 (790)
                      ....+..+.|+||  |++++....+.   .|.++++.++....+....  .+.........|+|++              
T Consensus       102 h~~~V~~v~~~p~~~g~~lasgs~D~---~i~lwd~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~  176 (316)
T 3bg1_A          102 HDSSVNSVCWAPHDYGLILACGSSDG---AISLLTYTGEGQWEVKKIN--NAHTIGCNAVSWAPAVVPGSLIDHPSGQKP  176 (316)
T ss_dssp             CSSCCCEEEECCTTTCSCEEEECSSS---CEEEEEECSSSCEEECCBT--TSSSSCBCCCEECCCCCC------CCSCCC
T ss_pred             CCCceEEEEECCCCCCcEEEEEcCCC---CEEEEecCCCCCcceeeee--ccccCCcceEEEccccCCccccccccccCc
Confidence            3445678999998  66555544332   2677777655321111110  1111123468899983              


Q ss_pred             ---CEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCC----CEEEEEEcCCCC
Q psy463          309 ---KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE----NNVYFLSTQGSP  381 (790)
Q Consensus       309 ---~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg----~~l~~~~~~~~~  381 (790)
                         +.|+ +.+    .++        .|.++|+.++...  .....+..+...+.. ++|+|++    +.|+-.+.++. 
T Consensus       177 ~~~~~l~-sgs----~D~--------~v~lWd~~~~~~~--~~~~~l~~h~~~V~~-v~~sp~~~~~~~~las~s~D~~-  239 (316)
T 3bg1_A          177 NYIKRFA-SGG----CDN--------LIKLWKEEEDGQW--KEEQKLEAHSDWVRD-VAWAPSIGLPTSTIASCSQDGR-  239 (316)
T ss_dssp             CCCCBEE-CCB----TTS--------BCCEEEECTTSCE--EEEECCBCCSSCEEE-EECCCCSSCSCCEEEEEETTCE-
T ss_pred             cccceEE-Eec----CCC--------eEEEEEeCCCCcc--ceeeecccCCCceEE-EEecCCCCCCCceEEEEcCCCe-
Confidence               4444 443    445        4556666543100  002234444444554 8899987    55655555532 


Q ss_pred             ceEEEEEEEcCCCC-C--CcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          382 IVQHMYRINIADPT-A--TPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       382 ~~~~l~~~~~~~~~-~--~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                        ..||  ++.... +  ..+.+..       ....+..+.|||++++|+......   .+.+++.
T Consensus       240 --v~iw--~~~~~~~~~~~~~~~~~-------~~~~v~~v~~sp~g~~las~~~D~---~v~lw~~  291 (316)
T 3bg1_A          240 --VFIW--TCDDASSNTWSPKLLHK-------FNDVVWHVSWSITANILAVSGGDN---KVTLWKE  291 (316)
T ss_dssp             --EEEE--ECSSTTCCCCBCCEEEE-------CSSCEEEEEECTTTCCEEEEESSS---CEEEEEE
T ss_pred             --EEEE--EccCccccchhhhhhhc-------CCCcEEEEEEcCCCCEEEEEcCCC---eEEEEEE
Confidence              4455  443310 1  1122221       245678899999999887654333   3555554

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.17  E-value=0.0012  Score=72.83  Aligned_cols=250  Identities=11%  Similarity=0.053  Sum_probs=139.2

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      .+.|+.|...++|+.....+           .|+++|.++++     +...+..|... . ...++++++  .+|+... 
T Consensus       158 ~~~~~~d~~~~~~V~~~~~~-----------~V~viD~~t~~-----v~~~i~~g~~p-~-~v~~SpDGr--~lyv~~~-  216 (567)
T 1qks_A          158 QQMNDWDLENLFSVTLRDAG-----------QIALIDGSTYE-----IKTVLDTGYAV-H-ISRLSASGR--YLFVIGR-  216 (567)
T ss_dssp             SCCSCCCGGGEEEEEETTTT-----------EEEEEETTTCC-----EEEEEECSSCE-E-EEEECTTSC--EEEEEET-
T ss_pred             ccccccCCCceEEEEeCCCC-----------eEEEEECCCCe-----EEEEEeCCCCc-c-ceEECCCCC--EEEEEcC-
Confidence            46788887767777654433           89999998874     44555555322 2 346777776  4555431 


Q ss_pred             CCCCCCCccccceeEEEecC--CcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEc----cCCcEEEEEec
Q psy463          193 ESDGSTPVDSWDHLTFIDLD--DQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWA----NESVVAAWVNR  266 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ws----pDg~~~~~~~r  266 (790)
                                ...|+++|+.  +++.     ..++.                 . ...-..+.+|    |||++++..+.
T Consensus       217 ----------dg~V~viD~~~~t~~~-----v~~i~-----------------~-G~~P~~ia~s~~~~pDGk~l~v~n~  263 (567)
T 1qks_A          217 ----------DGKVNMIDLWMKEPTT-----VAEIK-----------------I-GSEARSIETSKMEGWEDKYAIAGAY  263 (567)
T ss_dssp             ----------TSEEEEEETTSSSCCE-----EEEEE-----------------C-CSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred             ----------CCeEEEEECCCCCCcE-----eEEEe-----------------c-CCCCceeEEccccCCCCCEEEEEEc
Confidence                      1579999986  4432     12222                 1 2234578999    79997776655


Q ss_pred             cCcceEEEEEECCCCceeEEEEEeC---CC-ccc-c-cCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC
Q psy463          267 VQNRARITRCSINEGTCDVVFSRDL---DR-GWF-E-PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD  340 (790)
Q Consensus       267 ~~~~~~i~~~~~~~g~~~~l~~~~~---~~-~~~-~-~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~  340 (790)
                      ..+  .+.++|..+.+........+   +. .+. + ....+..|+++..+++...    ..|        +|+++|...
T Consensus       264 ~~~--~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~----~~g--------~v~~vd~~~  329 (567)
T 1qks_A          264 WPP--QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK----ETG--------KILLVDYTD  329 (567)
T ss_dssp             ETT--EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET----TTT--------EEEEEETTC
T ss_pred             cCC--eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec----CCC--------eEEEEecCC
Confidence            332  38888988877654433211   00 000 0 0234667899887765443    345        799999765


Q ss_pred             CCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc-cccCCCcccEEEEE
Q psy463          341 QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL-LTSANQKCSYSGAT  419 (790)
Q Consensus       341 ~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~-~~~~~~~~~~~~~~  419 (790)
                      .+.   .....+..+.+.  .-..|+|||++++..+...    ..|.++++++  ++...... + ...+ ..+  ..+.
T Consensus       330 ~~~---~~v~~i~~~~~~--~d~~~~pdgr~~~va~~~s----n~V~ViD~~t--~kl~~~i~-vgg~~P-hpg--~g~~  394 (567)
T 1qks_A          330 LNN---LKTTEISAERFL--HDGGLDGSHRYFITAANAR----NKLVVIDTKE--GKLVAIED-TGGQTP-HPG--RGAN  394 (567)
T ss_dssp             SSE---EEEEEEECCSSE--EEEEECTTSCEEEEEEGGG----TEEEEEETTT--TEEEEEEE-CSSSSB-CCT--TCEE
T ss_pred             Ccc---ceeeeeeccccc--cCceECCCCCEEEEEeCCC----CeEEEEECCC--CcEEEEEe-ccCcCC-CCc--ccee
Confidence            420   001222223221  1267999999888777653    4688899876  44332221 1 0000 011  1122


Q ss_pred             -EecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          420 -FSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       420 -~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                       ++|++..++++. ..+...|.+++.+.
T Consensus       395 ~~~p~~g~v~~t~-~~g~~~Vsvid~~~  421 (567)
T 1qks_A          395 FVHPTFGPVWATS-HMGDDSVALIGTDP  421 (567)
T ss_dssp             EEETTTEEEEEEE-BSSSSEEEEEECCT
T ss_pred             eECCCCCcEEEeC-CCCCCeEEEecCCC
Confidence             578766654432 22234577777654

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=98.16  E-value=0.00034  Score=72.39  Aligned_cols=161  Identities=9%  Similarity=0.068  Sum_probs=96.3

Q ss_pred             CCEEEEEEEcc--CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          246 EPVLSRVNWAN--ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       246 ~~~~~~~~wsp--Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ...+..+.|+|  +|++++....+.   .|.++|+.++++..+......    .......|+|||+.|+ +.+    .+|
T Consensus       125 ~~~v~~~~~~~~~~~~~l~s~s~dg---~i~~wd~~~~~~~~~~~~~~~----~~i~~~~~~pdg~~la-sg~----~dg  192 (343)
T 3lrv_A          125 ANEIIYMYGHNEVNTEYFIWADNRG---TIGFQSYEDDSQYIVHSAKSD----VEYSSGVLHKDSLLLA-LYS----PDG  192 (343)
T ss_dssp             SSCEEEEECCC---CCEEEEEETTC---CEEEEESSSSCEEEEECCCSS----CCCCEEEECTTSCEEE-EEC----TTS
T ss_pred             CCCEEEEEcCCCCCCCEEEEEeCCC---cEEEEECCCCcEEEEEecCCC----CceEEEEECCCCCEEE-EEc----CCC
Confidence            34578899999  999666554433   289999998887544422211    1245789999999777 555    456


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCc-ccccC-CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVP-VPLTR-GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~-~~lt~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                              .|.++|+.+++     .. ..+.. +...+.. ++|+|+|+.|+..+ ++     .|...++... .....+
T Consensus       193 --------~i~iwd~~~~~-----~~~~~~~~~h~~~v~~-l~fs~~g~~l~s~~-~~-----~v~iwd~~~~-~~~~~~  251 (343)
T 3lrv_A          193 --------ILDVYNLSSPD-----QASSRFPVDEEAKIKE-VKFADNGYWMVVEC-DQ-----TVVCFDLRKD-VGTLAY  251 (343)
T ss_dssp             --------CEEEEESSCTT-----SCCEECCCCTTSCEEE-EEECTTSSEEEEEE-SS-----BEEEEETTSS-TTCBSS
T ss_pred             --------EEEEEECCCCC-----CCccEEeccCCCCEEE-EEEeCCCCEEEEEe-CC-----eEEEEEcCCC-Ccceee
Confidence                    68899998876     12 34544 3445555 89999999877766 32     4555566541 111222


Q ss_pred             eecccccCCCcccE--EEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          402 TCDLLTSANQKCSY--SGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       402 t~~~~~~~~~~~~~--~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      ...    .......  ..+.|+|+|++++....+.  ..+.+++.+
T Consensus       252 ~~~----~~~~~~~~~~~~~~~~~g~~l~~~s~~d--~~i~v~~~~  291 (343)
T 3lrv_A          252 PTY----TIPEFKTGTVTYDIDDSGKNMIAYSNES--NSLTIYKFD  291 (343)
T ss_dssp             CCC----BC-----CCEEEEECTTSSEEEEEETTT--TEEEEEEEC
T ss_pred             ccc----ccccccccceEEEECCCCCEEEEecCCC--CcEEEEEEc
Confidence            110    0001111  3589999999987654323  246666653

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=98.16  E-value=0.00014  Score=78.33  Aligned_cols=97  Identities=13%  Similarity=0.030  Sum_probs=60.4

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCC--CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCC
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENN--VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEG  281 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~--~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g  281 (790)
                      ..|.++|+.+++.     ...+.                 .  ....+..+.|+|||++++....+.   .|.++|+.++
T Consensus       192 ~~i~iwd~~~~~~-----~~~~~-----------------~~~h~~~v~~~~~s~~~~~l~s~~~dg---~i~iwd~~~~  246 (437)
T 3gre_A          192 SRVIIFDIRTLER-----LQIIE-----------------NSPRHGAVSSICIDEECCVLILGTTRG---IIDIWDIRFN  246 (437)
T ss_dssp             SEEEEEETTTCCE-----EEEEE-----------------CCGGGCCEEEEEECTTSCEEEEEETTS---CEEEEETTTT
T ss_pred             CeEEEEeCCCCee-----eEEEc-----------------cCCCCCceEEEEECCCCCEEEEEcCCC---eEEEEEcCCc
Confidence            6888889887653     12222                 2  345688999999999666554433   2889999887


Q ss_pred             ceeEEEEEeCCCcccccCCce----eEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCC
Q psy463          282 TCDVVFSRDLDRGWFEPFDHL----RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       282 ~~~~l~~~~~~~~~~~~~~~~----~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                      ++........ ...   ....    .|+|||+.|+ ..+    .+|        .|.++|+.+++
T Consensus       247 ~~~~~~~~~~-~~~---v~~~~~~~~~s~~~~~l~-s~~----~dg--------~i~iwd~~~~~  294 (437)
T 3gre_A          247 VLIRSWSFGD-HAP---ITHVEVCQFYGKNSVIVV-GGS----SKT--------FLTIWNFVKGH  294 (437)
T ss_dssp             EEEEEEBCTT-CEE---EEEEEECTTTCTTEEEEE-EES----TTE--------EEEEEETTTTE
T ss_pred             cEEEEEecCC-CCc---eEEEEeccccCCCccEEE-EEc----CCC--------cEEEEEcCCCc
Confidence            6644332111 111   2234    6677887666 554    445        68888987664

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.16  E-value=0.00066  Score=71.38  Aligned_cols=181  Identities=10%  Similarity=0.073  Sum_probs=107.2

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|++++++++.      ...+..+... ..-++||+.++  .+|++...          ...|++++++++..+.+    
T Consensus        97 ~I~~i~~~~~~------~~~~~~~~~~-~~gl~~d~~~~--~ly~~D~~----------~~~I~r~~~~g~~~~~~----  153 (386)
T 3v65_B           97 DIRQVLPHRSE------YTLLLNNLEN-AIALDFHHRRE--LVFWSDVT----------LDRILRANLNGSNVEEV----  153 (386)
T ss_dssp             CEEEECTTSCC------CEEEECSCSC-EEEEEEETTTT--EEEEEETT----------TTEEEEEETTSCCEEEE----
T ss_pred             cceeeccCCCc------EEEEecCCCc-cEEEEEecCCC--eEEEEeCC----------CCcEEEEecCCCCcEEE----
Confidence            68888887663      2222222111 23357777665  34444321          25899999987652211    


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR  303 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  303 (790)
                       +.                 .....-..+++.+.+..++|++...+  .|.++++++...+.+......     ....++
T Consensus       154 -~~-----------------~~~~~p~glavd~~~g~lY~~d~~~~--~I~~~~~dg~~~~~l~~~~l~-----~P~gia  208 (386)
T 3v65_B          154 -VS-----------------TGLESPGGLAVDWVHDKLYWTDSGTS--RIEVANLDGAHRKVLLWQSLE-----KPRAIA  208 (386)
T ss_dssp             -EC-----------------SSCSCCCCEEEETTTTEEEEEETTTT--EEEECBTTSCSCEEEECSSCS-----CEEEEE
T ss_pred             -Ee-----------------CCCCCccEEEEEeCCCeEEEEcCCCC--eEEEEeCCCCceEEeecCCCC-----CCcEEE
Confidence             01                 01111124567777777777765433  589999887665555432211     123678


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      +.|++..|+++-.     ..      ...|+++++++..      .+.+..........++++|+++.||+.....    
T Consensus       209 vdp~~g~ly~td~-----~~------~~~I~r~~~dG~~------~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~----  267 (386)
T 3v65_B          209 LHPMEGTIYWTDW-----GN------TPRIEASSMDGSG------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKH----  267 (386)
T ss_dssp             EETTTTEEEEEEC-----SS------SCEEEEEETTSCS------CEEEECSSCSCEEEEEEEGGGTEEEEEETTT----
T ss_pred             EEcCCCeEEEecc-----CC------CCEEEEEeCCCCC------cEEEEECCCCCeeeEEEeCCCCEEEEEECCC----
Confidence            8998888885433     11      2479999998765      4444332222233389999999999986553    


Q ss_pred             EEEEEEEcCC
Q psy463          384 QHMYRINIAD  393 (790)
Q Consensus       384 ~~l~~~~~~~  393 (790)
                      ..|+++++++
T Consensus       268 ~~I~~~d~dG  277 (386)
T 3v65_B          268 HVIERANLDG  277 (386)
T ss_dssp             TEEEEECTTS
T ss_pred             CEEEEEeCCC
Confidence            4799999876

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.16  E-value=0.00052  Score=71.59  Aligned_cols=111  Identities=10%  Similarity=0.121  Sum_probs=67.2

Q ss_pred             eEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc-----C-----CCeEEe--EEEeeecCCC
Q psy463          303 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT-----R-----GRFTVT--EILAWDEKEN  370 (790)
Q Consensus       303 ~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-----~-----~~~~~~--~~~~~s~dg~  370 (790)
                      ..+|||+.+++ .+    .++        .++++|+.+++      ...+.     .     ..+...  ..++++||++
T Consensus       206 ~~~~~g~~~~~-~~----~~~--------~v~v~d~~~~~------~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~  266 (361)
T 2oiz_A          206 APALDKDKAHF-VS----YYG--------NVYSADFSGDE------VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG  266 (361)
T ss_dssp             CCEECSSEEEE-EB----TTS--------EEEEEECSSSS------CEEEEEEESCCHHHHHTTCEECCSSCEEEETTTT
T ss_pred             EecccCCEEEE-Ee----CCC--------eEEEEEecCCC------ceecccccccCccccccccccCCeeEEEEecCCC
Confidence            45889988874 44    234        68999987553      22110     0     011111  1257899999


Q ss_pred             EEEEEEc-CCC-----CceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEe
Q psy463          371 NVYFLST-QGS-----PIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFD  443 (790)
Q Consensus       371 ~l~~~~~-~~~-----~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~  443 (790)
                      ++|.... .+.     .....|+++++++  ++. ..+..       +.  ...+.|||||++++.+ +.   ..|.++|
T Consensus       267 ~lyv~~~~~~~~~~~~~~~~~v~viD~~t--~~~v~~i~~-------~~--p~~ia~spdg~~l~v~-n~---~~v~v~D  331 (361)
T 2oiz_A          267 RMYVFMHPDGKEGTHKFPAAEIWVMDTKT--KQRVARIPG-------RD--ALSMTIDQQRNLMLTL-DG---GNVNVYD  331 (361)
T ss_dssp             EEEEEEESSCCTTCTTCCCSEEEEEETTT--TEEEEEEEC-------TT--CCEEEEETTTTEEEEE-CS---SCEEEEE
T ss_pred             eEEEEEccCCCcccccCCCceEEEEECCC--CcEEEEEec-------CC--eeEEEECCCCCEEEEe-CC---CeEEEEE
Confidence            9888654 111     0124799999876  332 22221       22  6778999999977544 33   6799999


Q ss_pred             cCCC
Q psy463          444 KTGQ  447 (790)
Q Consensus       444 ~~~~  447 (790)
                      ++++
T Consensus       332 ~~t~  335 (361)
T 2oiz_A          332 ISQP  335 (361)
T ss_dssp             CSSS
T ss_pred             CCCC
Confidence            8877

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.14  E-value=0.00053  Score=69.97  Aligned_cols=187  Identities=13%  Similarity=0.053  Sum_probs=113.4

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCC---
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINE---  280 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~---  280 (790)
                      ..|.++++++++..      .+.                 ........+.|.+++..++|++...  ..|+++++++   
T Consensus        10 ~~I~~i~~~~~~~~------~~~-----------------~~~~~p~g~~~d~~~~~ly~~D~~~--~~I~~~~~~g~~~   64 (316)
T 1ijq_A           10 HEVRKMTLDRSEYT------SLI-----------------PNLRNVVALDTEVASNRIYWSDLSQ--RMICSTQLDRAHG   64 (316)
T ss_dssp             SSEEEEETTSCCCE------EEE-----------------CSCSSEEEEEEETTTTEEEEEETTT--TEEEEEEC-----
T ss_pred             CeEEEEECCCcceE------ehh-----------------cCCCceEEEEEEeCCCEEEEEECCC--CcEEEEECCCCCC
Confidence            57899999876521      111                 1223356789999888888887643  3499999886   


Q ss_pred             -CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE
Q psy463          281 -GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV  359 (790)
Q Consensus       281 -g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~  359 (790)
                       ...+.+....    .. ....+++.+.+..||++-.      +      ...|.++++++..      .+.+.......
T Consensus        65 ~~~~~~~~~~~----~~-~p~glavd~~~~~ly~~d~------~------~~~I~~~~~~g~~------~~~~~~~~~~~  121 (316)
T 1ijq_A           65 VSSYDTVISRD----IQ-APDGLAVDWIHSNIYWTDS------V------LGTVSVADTKGVK------RKTLFRENGSK  121 (316)
T ss_dssp             ---CEEEECSS----CS-CCCEEEEETTTTEEEEEET------T------TTEEEEEETTSSS------EEEEEECTTCC
T ss_pred             CcccEEEEeCC----CC-CcCEEEEeecCCeEEEEEC------C------CCEEEEEeCCCCc------eEEEEECCCCC
Confidence             2333333211    11 1346788888888885433      2      3479999988764      44443322222


Q ss_pred             eEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeE
Q psy463          360 TEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEI  439 (790)
Q Consensus       360 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i  439 (790)
                      ...++.+|+++.||++.....   ..|+++++++  ...+.+...      ....-..++++++++.|+++...  ...|
T Consensus       122 P~~iavdp~~g~ly~~d~~~~---~~I~~~~~dG--~~~~~~~~~------~~~~P~gla~d~~~~~lY~~D~~--~~~I  188 (316)
T 1ijq_A          122 PRAIVVDPVHGFMYWTDWGTP---AKIKKGGLNG--VDIYSLVTE------NIQWPNGITLDLLSGRLYWVDSK--LHSI  188 (316)
T ss_dssp             EEEEEEETTTTEEEEEECSSS---CEEEEEETTS--CCEEEEECS------SCSCEEEEEEETTTTEEEEEETT--TTEE
T ss_pred             cceEEeCCCCCEEEEEccCCC---CeEEEEcCCC--CCeEEEEEC------CCCCceEEEEeccCCEEEEEECC--CCeE
Confidence            223778998888988764422   5799999876  333333221      22345678899998888776432  4578


Q ss_pred             EEEecCCCeEEE
Q psy463          440 MLFDKTGQRLLY  451 (790)
Q Consensus       440 ~~~~~~~~~~~~  451 (790)
                      +++++++...+.
T Consensus       189 ~~~d~dg~~~~~  200 (316)
T 1ijq_A          189 SSIDVNGGNRKT  200 (316)
T ss_dssp             EEEETTSCSCEE
T ss_pred             EEEecCCCceEE
Confidence            999988754443

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.13  E-value=0.00029  Score=72.48  Aligned_cols=223  Identities=10%  Similarity=0.030  Sum_probs=121.0

Q ss_pred             EEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCccee
Q psy463           84 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  163 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~  163 (790)
                      .+.+++..+++....+...      ..+...++++|| +++......            ..|+++|+.+++     +...
T Consensus        65 ~v~viD~~t~~~~~~i~~~------~~p~~i~~~~~g-~lyv~~~~~------------~~v~~iD~~t~~-----~~~~  120 (328)
T 3dsm_A           65 VIFAIDINTFKEVGRITGF------TSPRYIHFLSDE-KAYVTQIWD------------YRIFIINPKTYE-----ITGY  120 (328)
T ss_dssp             EEEEEETTTCCEEEEEECC------SSEEEEEEEETT-EEEEEEBSC------------SEEEEEETTTTE-----EEEE
T ss_pred             EEEEEECcccEEEEEcCCC------CCCcEEEEeCCC-eEEEEECCC------------CeEEEEECCCCe-----EEEE
Confidence            4666787777654433210      111234778998 555544222            279999988774     2233


Q ss_pred             ccccce-----EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhc
Q psy463          164 LTRGRF-----TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW  238 (790)
Q Consensus       164 lt~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~  238 (790)
                      +.-+..     ....+ .+  +++  .+|+....         ....|+++|+++++..+     .+.            
T Consensus       121 i~~g~~~~~~~~p~~i-~~--~~~--~lyv~~~~---------~~~~v~viD~~t~~~~~-----~i~------------  169 (328)
T 3dsm_A          121 IECPDMDMESGSTEQM-VQ--YGK--YVYVNCWS---------YQNRILKIDTETDKVVD-----ELT------------  169 (328)
T ss_dssp             EECTTCCTTTCBCCCE-EE--ETT--EEEEEECT---------TCCEEEEEETTTTEEEE-----EEE------------
T ss_pred             EEcCCccccCCCcceE-EE--ECC--EEEEEcCC---------CCCEEEEEECCCCeEEE-----EEE------------
Confidence            332220     11111 22  233  45555321         12689999998875321     111            


Q ss_pred             ccCCCCCCCEEEEEEEccCCcEEEEEeccC-------cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEE
Q psy463          239 DEKENNVEPVLSRVNWANESVVAAWVNRVQ-------NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKM  311 (790)
Q Consensus       239 ~~~~~~~~~~~~~~~wspDg~~~~~~~r~~-------~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i  311 (790)
                           . ......+.++|||++++......       ....|+++|.++++......... ..   ....++++|||+.|
T Consensus       170 -----~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~---~p~~la~~~d~~~l  239 (328)
T 3dsm_A          170 -----I-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GD---WPSEVQLNGTRDTL  239 (328)
T ss_dssp             -----C-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TC---CCEEEEECTTSCEE
T ss_pred             -----c-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CC---CceeEEEecCCCEE
Confidence                 0 11123467899999433332220       02469999999887654333211 10   13478999999988


Q ss_pred             EEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc--c-ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463          312 LLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV--P-LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR  388 (790)
Q Consensus       312 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~--~-lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  388 (790)
                      + +..             . .|+++|+++++      ..  . ++.+.....+ ++++|+++.||+....+......|++
T Consensus       240 y-v~~-------------~-~v~~~d~~t~~------~~~~~~~~~~~~~p~g-i~vdp~~g~lyva~~~~y~~~~~V~v  297 (328)
T 3dsm_A          240 Y-WIN-------------N-DIWRMPVEADR------VPVRPFLEFRDTKYYG-LTVNPNNGEVYVADAIDYQQQGIVYR  297 (328)
T ss_dssp             E-EES-------------S-SEEEEETTCSS------CCSSCSBCCCSSCEEE-EEECTTTCCEEEEECTTSSSEEEEEE
T ss_pred             E-EEc-------------c-EEEEEECCCCc------eeeeeeecCCCCceEE-EEEcCCCCeEEEEcccccccCCEEEE
Confidence            7 343             1 48999998876      21  1 2221112233 78999877788776221112367888


Q ss_pred             EEcCC
Q psy463          389 INIAD  393 (790)
Q Consensus       389 ~~~~~  393 (790)
                      ++.++
T Consensus       298 ~d~~g  302 (328)
T 3dsm_A          298 YSPQG  302 (328)
T ss_dssp             ECTTC
T ss_pred             ECCCC
Confidence            88764

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=98.12  E-value=0.0018  Score=67.23  Aligned_cols=69  Identities=17%  Similarity=0.386  Sum_probs=47.1

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccE-EEEEEcCCCCcccCCCcccccC--CCeEEeEEEeeecCCCEEEEE
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDH-LTFIDLDDQAGIKDKVPVPLTR--GRFTVTEILAWDEKENNVYFL  375 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~-l~~~d~~~~~~~~~~~~~~lt~--~~~~~~~~~~~s~dg~~l~~~  375 (790)
                      .....|||||+.|+ +.+    .+|        . |.++|+.+++     ....+..  +...+.. ++|+|||+.|+..
T Consensus       198 v~~~~~s~~g~~l~-s~s----~d~--------~~v~iwd~~~~~-----~~~~~~~g~h~~~v~~-~~~s~~~~~l~s~  258 (355)
T 3vu4_A          198 IKMVRLNRKSDMVA-TCS----QDG--------TIIRVFKTEDGV-----LVREFRRGLDRADVVD-MKWSTDGSKLAVV  258 (355)
T ss_dssp             EEEEEECTTSSEEE-EEE----TTC--------SEEEEEETTTCC-----EEEEEECTTCCSCEEE-EEECTTSCEEEEE
T ss_pred             eEEEEECCCCCEEE-EEe----CCC--------CEEEEEECCCCc-----EEEEEEcCCCCCcEEE-EEECCCCCEEEEE
Confidence            45789999999887 665    455        4 8889998776     2444542  3344554 8999999988777


Q ss_pred             EcCCCCceEEEEEE
Q psy463          376 STQGSPIVQHMYRI  389 (790)
Q Consensus       376 ~~~~~~~~~~l~~~  389 (790)
                      +.++.   .+||.+
T Consensus       259 s~d~~---v~iw~~  269 (355)
T 3vu4_A          259 SDKWT---LHVFEI  269 (355)
T ss_dssp             ETTCE---EEEEES
T ss_pred             ECCCE---EEEEEc
Confidence            76632   445443

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=98.11  E-value=0.00035  Score=70.87  Aligned_cols=94  Identities=11%  Similarity=0.116  Sum_probs=62.5

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|.++|+.+++.     ...+.                 .....+..+.|+|||+++.....+    .|.++++.+++.
T Consensus       205 g~i~i~d~~~~~~-----~~~~~-----------------~~~~~i~~~~~~~~~~l~~~~~dg----~v~iwd~~~~~~  258 (313)
T 3odt_A          205 GLIKLVDMHTGDV-----LRTYE-----------------GHESFVYCIKLLPNGDIVSCGEDR----TVRIWSKENGSL  258 (313)
T ss_dssp             SEEEEEETTTCCE-----EEEEE-----------------CCSSCEEEEEECTTSCEEEEETTS----EEEEECTTTCCE
T ss_pred             CeEEEEECCchhh-----hhhhh-----------------cCCceEEEEEEecCCCEEEEecCC----EEEEEECCCCce
Confidence            5788889887653     12222                 345668899999999754443322    399999998877


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCC
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                      .........     ......|+|||+ ++ +.+    .+|        .|.++++.+++
T Consensus       259 ~~~~~~~~~-----~i~~~~~~~~~~-~~-~~~----~dg--------~i~iw~~~~~~  298 (313)
T 3odt_A          259 KQVITLPAI-----SIWSVDCMSNGD-II-VGS----SDN--------LVRIFSQEKSR  298 (313)
T ss_dssp             EEEEECSSS-----CEEEEEECTTSC-EE-EEE----TTS--------CEEEEESCGGG
T ss_pred             eEEEeccCc-----eEEEEEEccCCC-EE-EEe----CCC--------cEEEEeCCCCc
Confidence            655543211     144789999998 44 344    456        68889987665

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.10  E-value=0.0025  Score=64.73  Aligned_cols=224  Identities=10%  Similarity=0.098  Sum_probs=122.9

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|.++++++...    ....+-.+ .....-+.|++..+  .+|.+...          ...|++++++++.....    
T Consensus        14 ~I~~i~l~~~~~----~~~~~~~~-~~~~~~ld~d~~~~--~lyw~D~~----------~~~I~r~~~~g~~~~~~----   72 (318)
T 3sov_A           14 DLRLVDATNGKE----NATIVVGG-LEDAAAVDFVFSHG--LIYWSDVS----------EEAIKRTEFNKTESVQN----   72 (318)
T ss_dssp             EEEEEETTCTTS----CCEEEEEE-EEEEEEEEEEGGGT--EEEEEETT----------TTEEEEEETTSSSCCCE----
T ss_pred             eEEEEECCCCce----EEEEEecC-CCccEEEEEEeCCC--EEEEEECC----------CCcEEEEEccCCCceEE----
Confidence            799999977631    11111111 11122356777665  34444321          25899999887632110    


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR  303 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  303 (790)
                      .+.                 ..-.....+++.+.+..++|++...  ..|.++++++...+.+......     ....++
T Consensus        73 ~~~-----------------~~l~~p~glavd~~~g~ly~~d~~~--~~I~~~~~dG~~~~~l~~~~~~-----~P~gia  128 (318)
T 3sov_A           73 VVV-----------------SGLLSPDGLACDWLGEKLYWTDSET--NRIEVSNLDGSLRKVLFWQELD-----QPRAIA  128 (318)
T ss_dssp             EEE-----------------ECCSCCCEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECSSCS-----SEEEEE
T ss_pred             EEc-----------------CCCCCccEEEEEcCCCeEEEEECCC--CEEEEEECCCCcEEEEEeCCCC-----CccEEE
Confidence            011                 0111123466677677777776543  3589999987666555432211     123678


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      +.|++..|+++-.     ..      ...|+++++++..      .+.+..........++++++++.||+.-...    
T Consensus       129 vdp~~g~ly~td~-----~~------~~~I~r~~~dG~~------~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~----  187 (318)
T 3sov_A          129 LDPSSGFMYWTDW-----GE------VPKIERAGMDGSS------RFIIINSEIYWPNGLTLDYEEQKLYWADAKL----  187 (318)
T ss_dssp             EEGGGTEEEEEEC-----SS------SCEEEEEETTSCS------CEEEECSSCSCEEEEEEETTTTEEEEEETTT----
T ss_pred             EeCCCCEEEEEec-----CC------CCEEEEEEcCCCC------eEEEEECCCCCccEEEEeccCCEEEEEECCC----
Confidence            8988777874332     11      3479999998765      4444322222233489999999999986553    


Q ss_pred             EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          384 QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      ..|+++++++  ...+.+...      ....-..+++.  +..++++  ......|++++..
T Consensus       188 ~~I~~~d~dG--~~~~~~~~~------~~~~P~glav~--~~~lywt--d~~~~~V~~~~~~  237 (318)
T 3sov_A          188 NFIHKSNLDG--TNRQAVVKG------SLPHPFALTLF--EDILYWT--DWSTHSILACNKY  237 (318)
T ss_dssp             TEEEEEETTS--CSCEEEECS------CCSCEEEEEEE--TTEEEEE--ETTTTEEEEEETT
T ss_pred             CEEEEEcCCC--CceEEEecC------CCCCceEEEEe--CCEEEEE--ecCCCeEEEEECC
Confidence            4799999987  344433321      11223334443  3444444  2234566666663

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.08  E-value=0.0026  Score=67.12  Aligned_cols=191  Identities=10%  Similarity=0.050  Sum_probs=108.8

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|.++++++..      ...+..+.... .-++||+..+  .+|.+...          ...|+++++++......  ..
T Consensus        93 ~I~~i~l~~~~------~~~~~~~~~~~-~~l~~d~~~~--~lywsD~~----------~~~I~~~~~~g~~~~~~--~~  151 (400)
T 3p5b_L           93 EVRKMTLDRSE------YTSLIPNLRNV-VALDTEVASN--RIYWSDLS----------QRMICSTQLDRAHGVSS--YD  151 (400)
T ss_dssp             EEEEECTTSCS------CEEEECSCSCE-EEEEEETTTT--EEEEEETT----------TTEEEEEEC------CC--CE
T ss_pred             eeEEEccCCcc------eeEeccccCcc-eEEeeeeccC--ceEEEecC----------CCeEEEEEcccCCCCCc--ce
Confidence            78999987763      22222221112 2357777655  34444321          25789998876321000  11


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR  303 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  303 (790)
                      .+..                ........++..+.++.++|++...+  .|.++++++...+.+.......     ...++
T Consensus       152 ~~~~----------------~~~~~p~glavD~~~~~lY~~d~~~~--~I~~~~~~g~~~~~l~~~~~~~-----P~~ia  208 (400)
T 3p5b_L          152 TVIS----------------RDIQAPDGLAVDWIHSNIYWTDSVLG--TVSVADTKGVKRKTLFRENGSK-----PRAIV  208 (400)
T ss_dssp             EEEC----------------SSCSCEEEEEEETTTTEEEEEETTTT--EEEEECTTTCSEEEEEECSSCC-----EEEEE
T ss_pred             EEEe----------------CCCCCcccEEEEecCCceEEEECCCC--eEEEEeCCCCceEEEEeCCCCC-----cceEE
Confidence            1110                12223345667776777777765433  5999999887776666532211     23678


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      ..|.+..|+++-.     ..      ...|+++++++..      .+.+..........++++++++.||+.-...    
T Consensus       209 vdp~~g~ly~td~-----~~------~~~I~~~~~dG~~------~~~~~~~~l~~P~glavd~~~~~lY~aD~~~----  267 (400)
T 3p5b_L          209 VDPVHGFMYWTDW-----GT------PAKIKKGGLNGVD------IYSLVTENIQWPNGITLDLLSGRLYWVDSKL----  267 (400)
T ss_dssp             EETTTTEEEEEEC-----SS------SCCEEEEETTSCS------CEEEECSSCSCEEEEEEETTTTEEEEEETTT----
T ss_pred             EecccCeEEEEeC-----CC------CCEEEEEeCCCCc------cEEEEECCCCceEEEEEEeCCCEEEEEECCC----
Confidence            8998887875432     11      2369999998765      4444333322233389999999999986543    


Q ss_pred             EEEEEEEcCCCCCCccee
Q psy463          384 QHMYRINIADPTATPECI  401 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~~~l  401 (790)
                      ..|+++++++  ...+.+
T Consensus       268 ~~I~~~d~dG--~~~~~~  283 (400)
T 3p5b_L          268 HSISSIDVNG--GNRKTI  283 (400)
T ss_dssp             TEEEEEETTS--CCCEEE
T ss_pred             CEEEEEeCCC--CccEEE
Confidence            4799999987  444443

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.08  E-value=0.00092  Score=67.94  Aligned_cols=162  Identities=11%  Similarity=0.027  Sum_probs=89.6

Q ss_pred             EEEEEEccCCcEEEEEecc------------CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEc----cCCCEEE
Q psy463          249 LSRVNWANESVVAAWVNRV------------QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFS----SDGKKML  312 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~------------~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~s----pDg~~i~  312 (790)
                      ...+.++|||++.+.....            .....|+.++.+ ++...+.....      ......|+    |||+.|+
T Consensus       119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~------~~~~i~~~~~~d~dg~~l~  191 (314)
T 1pjx_A          119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ------FPNGIAVRHMNDGRPYQLI  191 (314)
T ss_dssp             CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES------SEEEEEEEECTTSCEEEEE
T ss_pred             CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC------CcceEEEecccCCCCCEEE
Confidence            4578899999944333221            012469999887 66655543321      12367899    9998777


Q ss_pred             EEEccccccCCCCCcCcccEEEEEEcC-CCCcccCCCcccccCCC-eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463          313 LILSHNQESDGSTPVDSWDHLTFIDLD-DQAGIKDKVPVPLTRGR-FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN  390 (790)
Q Consensus       313 ~~~~~~~~~~g~~~~~~~~~l~~~d~~-~~~~~~~~~~~~lt~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~  390 (790)
                      +...    ..        ..|++++++ .++.........+.... ....+ +.++++|+ |++.....    ..|++++
T Consensus       192 v~~~----~~--------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~-i~~d~~G~-l~v~~~~~----~~i~~~d  253 (314)
T 1pjx_A          192 VAET----PT--------KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADG-MDFDEDNN-LLVANWGS----SHIEVFG  253 (314)
T ss_dssp             EEET----TT--------TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEE-EEEBTTCC-EEEEEETT----TEEEEEC
T ss_pred             EEEC----CC--------CeEEEEECCCCCccccceEEEECCCCCCCCCCc-eEECCCCC-EEEEEcCC----CEEEEEc
Confidence            4433    22        368888875 33200000011122111 22333 78899986 55554332    3688888


Q ss_pred             cCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          391 IADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       391 ~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .++  ++. ..+..       .......+.+++||++++++...  ...|++++++.
T Consensus       254 ~~~--g~~~~~~~~-------~~~~~~~i~~~~dg~~l~v~~~~--~~~l~~~~~~~  299 (314)
T 1pjx_A          254 PDG--GQPKMRIRC-------PFEKPSNLHFKPQTKTIFVTEHE--NNAVWKFEWQR  299 (314)
T ss_dssp             TTC--BSCSEEEEC-------SSSCEEEEEECTTSSEEEEEETT--TTEEEEEECSS
T ss_pred             CCC--CcEeEEEeC-------CCCCceeEEECCCCCEEEEEeCC--CCeEEEEeCCC
Confidence            763  232 22221       22456778899999977665432  24677777653

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.08  E-value=0.00047  Score=68.40  Aligned_cols=154  Identities=12%  Similarity=0.147  Sum_probs=82.1

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ....+.++|||+++. ++..  ...|++++..+........    .. ........++|||+ |++...    ..     
T Consensus       109 ~p~~i~~~~~g~l~v-~~~~--~~~i~~~~~~~~~~~~~~~----~~-~~~p~~i~~~~~g~-l~v~~~----~~-----  170 (270)
T 1rwi_B          109 YPEGLAVDTQGAVYV-ADRG--NNRVVKLAAGSKTQTVLPF----TG-LNDPDGVAVDNSGN-VYVTDT----DN-----  170 (270)
T ss_dssp             SEEEEEECTTCCEEE-EEGG--GTEEEEECTTCCSCEECCC----CS-CCSCCCEEECTTCC-EEEEEG----GG-----
T ss_pred             CCcceEECCCCCEEE-EECC--CCEEEEEECCCceeEeecc----cc-CCCceeEEEeCCCC-EEEEEC----CC-----
Confidence            456788999998332 2222  1237777655443322111    11 11134788999997 553332    22     


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLT  407 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~  407 (790)
                         ..|++++.+++.      ..............++++++| .||+.....    ..|++++.++  .....+..    
T Consensus       171 ---~~i~~~~~~~~~------~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~----~~v~~~~~~~--~~~~~~~~----  230 (270)
T 1rwi_B          171 ---NRVVKLEAESNN------QVVLPFTDITAPWGIAVDEAG-TVYVTEHNT----NQVVKLLAGS--TTSTVLPF----  230 (270)
T ss_dssp             ---TEEEEECTTTCC------EEECCCSSCCSEEEEEECTTC-CEEEEETTT----SCEEEECTTC--SCCEECCC----
T ss_pred             ---CEEEEEecCCCc------eEeecccCCCCceEEEECCCC-CEEEEECCC----CcEEEEcCCC--Ccceeecc----
Confidence               379999987765      332222221112237889998 576665442    3688888765  32222211    


Q ss_pred             cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          408 SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                        .+......+.++++|+ ++++..+  ...|.++++
T Consensus       231 --~~~~~p~~i~~~~~g~-l~v~~~~--~~~v~~~~~  262 (270)
T 1rwi_B          231 --TGLNTPLAVAVDSDRT-VYVADRG--NDRVVKLTS  262 (270)
T ss_dssp             --CSCSCEEEEEECTTCC-EEEEEGG--GTEEEEECC
T ss_pred             --CCCCCceeEEECCCCC-EEEEECC--CCEEEEEcC
Confidence              0223456788999987 4333222  234555554

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.08  E-value=0.00078  Score=71.49  Aligned_cols=205  Identities=11%  Similarity=0.059  Sum_probs=107.6

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ..+|+|+|+ |++.....            ..|.+++++++.     +..-+..+..  .. .+++++++  .+|+....
T Consensus       135 ~la~d~~g~-lyv~d~~~------------~~I~~id~~~g~-----~~~~~~~~~~--~~-ia~~~~g~--~l~~~d~~  191 (409)
T 3hrp_A          135 GIAAVGNNT-VLAYQRDD------------PRVRLISVDDNK-----VTTVHPGFKG--GK-PAVTKDKQ--RVYSIGWE  191 (409)
T ss_dssp             EEEECSTTE-EEEEETTT------------TEEEEEETTTTE-----EEEEEETCCB--CB-CEECTTSS--EEEEEBSS
T ss_pred             EEEEeCCCC-EEEEecCC------------CcEEEEECCCCE-----EEEeeccCCC--Cc-eeEecCCC--cEEEEecC
Confidence            348899987 55544321            279999988763     2221222211  12 57777766  44444321


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                      ..         ..||+++.+++...     ..+.        ..     ..........++++|++..+++...   ...
T Consensus       192 ~~---------~~I~~~d~~~~~~~-----~~~g--------~~-----~~~~~~~p~~iav~p~~g~lyv~d~---~~~  241 (409)
T 3hrp_A          192 GT---------HTVYVYMKASGWAP-----TRIG--------QL-----GSTFSGKIGAVALDETEEWLYFVDS---NKN  241 (409)
T ss_dssp             TT---------CEEEEEEGGGTTCE-----EEEE--------EC-----CTTSCSCCCBCEECTTSSEEEEECT---TCE
T ss_pred             CC---------ceEEEEEcCCCcee-----EEee--------ec-----cchhcCCcEEEEEeCCCCeEEEEEC---CCc
Confidence            11         27999988765421     1110        00     0011223346788995443333443   225


Q ss_pred             EEEEECCCCceeEEEEEe--CCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463          273 ITRCSINEGTCDVVFSRD--LDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  350 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~--~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~  350 (790)
                      |++++.+++....+....  +..++. +...++|+|++..|++.-.      +      ...|++++.++..      ..
T Consensus       242 I~~~d~~~~~~~~~~~~~~~g~~~~~-P~~~ia~~p~~g~lyv~d~------~------~~~I~~~~~~g~~------~~  302 (409)
T 3hrp_A          242 FGRFNVKTQEVTLIKQLELSGSLGTN-PGPYLIYYFVDSNFYMSDQ------N------LSSVYKITPDGEC------EW  302 (409)
T ss_dssp             EEEEETTTCCEEEEEECCCCSCCCCS-SCCEEEEETTTTEEEEEET------T------TTEEEEECTTCCE------EE
T ss_pred             EEEEECCCCCEEEEecccccCCCCCC-ccccEEEeCCCCEEEEEeC------C------CCEEEEEecCCCE------EE
Confidence            999999988755442211  111111 1127899998777874432      2      3478899876532      11


Q ss_pred             cccCC-------------CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          351 PLTRG-------------RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       351 ~lt~~-------------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      .....             .+.....++++++|+ ||+....+.   ..|+++++..
T Consensus       303 ~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~---~~I~~~~~~~  354 (409)
T 3hrp_A          303 FCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKG---YCLRKLDILD  354 (409)
T ss_dssp             EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTT---CEEEEEETTT
T ss_pred             EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCC---CEEEEEECCC
Confidence            11100             011122378999998 777655133   5788888644

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.07  E-value=0.00018  Score=78.99  Aligned_cols=111  Identities=10%  Similarity=0.005  Sum_probs=69.6

Q ss_pred             CCCCEEEEE--EEccCC-cEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccc
Q psy463          244 NVEPVLSRV--NWANES-VVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQE  320 (790)
Q Consensus       244 ~~~~~~~~~--~wspDg-~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~  320 (790)
                      .....+..+  .|+||| ++++....+.   .|.++|+.++++............   ....+|||||+.|+ ..+    
T Consensus       306 ~H~~~V~sv~~~~s~~g~~~laS~S~D~---tvklWD~~~~~~~~~~~~~~~~~~---v~~v~fsp~~~~l~-s~~----  374 (524)
T 2j04_B          306 VHDSYILSVSTAYSDFEDTVVSTVAVDG---YFYIFNPKDIATTKTTVSRFRGSN---LVPVVYCPQIYSYI-YSD----  374 (524)
T ss_dssp             CSSSCEEEEEEECCTTSCCEEEEEETTS---EEEEECGGGHHHHCEEEEECSCCS---CCCEEEETTTTEEE-EEC----
T ss_pred             cccccEEEEEEEcCCCCCeEEEEeccCC---eEEEEECCCCCcccccccccccCc---ccceEeCCCcCeEE-EeC----
Confidence            345567777  689998 6666655443   388889887765433222110011   24689999999766 444    


Q ss_pred             cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCC
Q psy463          321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQG  379 (790)
Q Consensus       321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~  379 (790)
                      .++        .|.++|+.++.     ....+..+...+.. ++|+|+|+.|+-.+.++
T Consensus       375 ~d~--------tv~lwd~~~~~-----~~~~l~gH~~~V~s-va~Sp~g~~l~Sgs~Dg  419 (524)
T 2j04_B          375 GAS--------SLRAVPSRAAF-----AVHPLVSRETTITA-IGVSRLHPMVLAGSADG  419 (524)
T ss_dssp             SSS--------EEEEEETTCTT-----CCEEEEECSSCEEE-EECCSSCCBCEEEETTT
T ss_pred             CCC--------cEEEEECcccc-----cceeeecCCCceEE-EEeCCCCCeEEEEECCC
Confidence            233        58888987765     23445555555555 88999999776655553

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.01  E-value=0.0043  Score=63.15  Aligned_cols=116  Identities=8%  Similarity=0.029  Sum_probs=75.3

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      ..+++.+.++.+++++...  ..|.++++++...+.+......     .....+..|++..|++.-.     ..      
T Consensus        80 ~glavd~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~-----~P~~iavdp~~g~ly~~d~-----~~------  141 (316)
T 1ijq_A           80 DGLAVDWIHSNIYWTDSVL--GTVSVADTKGVKRKTLFRENGS-----KPRAIVVDPVHGFMYWTDW-----GT------  141 (316)
T ss_dssp             CEEEEETTTTEEEEEETTT--TEEEEEETTSSSEEEEEECTTC-----CEEEEEEETTTTEEEEEEC-----SS------
T ss_pred             CEEEEeecCCeEEEEECCC--CEEEEEeCCCCceEEEEECCCC-----CcceEEeCCCCCEEEEEcc-----CC------
Confidence            3566777777777776543  3488999987766666543211     1236789998888874332     11      


Q ss_pred             ccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ...|+++++++..      .+.+..........++++++++.||+.....    ..|+++++++
T Consensus       142 ~~~I~~~~~dG~~------~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~----~~I~~~d~dg  195 (316)
T 1ijq_A          142 PAKIKKGGLNGVD------IYSLVTENIQWPNGITLDLLSGRLYWVDSKL----HSISSIDVNG  195 (316)
T ss_dssp             SCEEEEEETTSCC------EEEEECSSCSCEEEEEEETTTTEEEEEETTT----TEEEEEETTS
T ss_pred             CCeEEEEcCCCCC------eEEEEECCCCCceEEEEeccCCEEEEEECCC----CeEEEEecCC
Confidence            2479999988764      4444322222233388999999999886553    4799999987

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=98.01  E-value=0.0016  Score=67.33  Aligned_cols=114  Identities=15%  Similarity=0.223  Sum_probs=70.2

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCcee-EEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCD-VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~-~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      .+..+.|+|||++++....+.   .|.++|+.+++.. ..+.. ...   .......|+|||+.|+ ..+     ++   
T Consensus       172 ~i~~~~~~pdg~~lasg~~dg---~i~iwd~~~~~~~~~~~~~-~h~---~~v~~l~fs~~g~~l~-s~~-----~~---  235 (343)
T 3lrv_A          172 EYSSGVLHKDSLLLALYSPDG---ILDVYNLSSPDQASSRFPV-DEE---AKIKEVKFADNGYWMV-VEC-----DQ---  235 (343)
T ss_dssp             CCCEEEECTTSCEEEEECTTS---CEEEEESSCTTSCCEECCC-CTT---SCEEEEEECTTSSEEE-EEE-----SS---
T ss_pred             ceEEEEECCCCCEEEEEcCCC---EEEEEECCCCCCCccEEec-cCC---CCEEEEEEeCCCCEEE-EEe-----CC---
Confidence            467899999999766644332   3999999988765 22221 011   1245789999999887 444     22   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccC---CCeEEe-EEEeeecCCCEEEEEEc-CCCCceEEEEEEE
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTR---GRFTVT-EILAWDEKENNVYFLST-QGSPIVQHMYRIN  390 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~---~~~~~~-~~~~~s~dg~~l~~~~~-~~~~~~~~l~~~~  390 (790)
                           .|.++|+..++.     ...+..   ....+. ..++|+|+|+.|+..+. ++.   .+||.++
T Consensus       236 -----~v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~---i~v~~~~  291 (343)
T 3lrv_A          236 -----TVVCFDLRKDVG-----TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNS---LTIYKFD  291 (343)
T ss_dssp             -----BEEEEETTSSTT-----CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTE---EEEEEEC
T ss_pred             -----eEEEEEcCCCCc-----ceeecccccccccccceEEEECCCCCEEEEecCCCCc---EEEEEEc
Confidence                 588999987651     222222   112221 13789999998877666 332   5666654

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=98.00  E-value=0.00045  Score=73.11  Aligned_cols=41  Identities=5%  Similarity=0.201  Sum_probs=28.7

Q ss_pred             EEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          332 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       332 ~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      .|.++|+.+++     ....+..+...+.. ++|+|||+.|+..+..
T Consensus       340 ~V~lwd~~~~~-----~~~~~~~~~~~V~s-vafspdG~~LA~as~~  380 (393)
T 4gq1_A          340 LIQLINTYEKD-----SNSIPIQLGMPIVD-FCWHQDGSHLAIATEG  380 (393)
T ss_dssp             EEEEEETTCTT-----CCEEEEECSSCEEE-EEECTTSSEEEEEESS
T ss_pred             EEEEEECCCCc-----EEEEecCCCCcEEE-EEEcCCCCEEEEEeCC
Confidence            68999998776     13333444444555 8999999999887654

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.99  E-value=0.00012  Score=79.28  Aligned_cols=212  Identities=13%  Similarity=0.088  Sum_probs=112.2

Q ss_pred             ccccc-----CCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcce--eccccceEEEEEEeee-ccCCccE
Q psy463          114 LRFSS-----DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV--PLTRGRFTVTEILAWD-ERENNPL  185 (790)
Q Consensus       114 ~~~sp-----dg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~--~lt~~~~~~~~~~~~~-~~~~~~~  185 (790)
                      |..|.     ||++++... ...           ..|.++|+++.+     ...  .|..+.. ...+.-.. |+++  .
T Consensus        90 ~~~s~t~g~~DG~~lfVnd-~~~-----------~rVavIdl~t~~-----~~~ii~ip~g~~-phg~~~~~~p~~~--~  149 (595)
T 1fwx_A           90 VHMSFTEGKYDGRFLFMND-KAN-----------TRVARVRCDVMK-----CDAILEIPNAKG-IHGLRPQKWPRSN--Y  149 (595)
T ss_dssp             EEEEEETTEEEEEEEEEEE-TTT-----------TEEEEEETTTTE-----EEEEEECSSCCS-EEEEEECCSSBCS--E
T ss_pred             cccCCCCCCcCCCEEEEEc-CCC-----------CEEEEEECCCce-----EeeEEeCCCCCC-CcceeeeecCCCc--E
Confidence            55555     998876633 322           179999998863     222  4444432 22222223 5555  5


Q ss_pred             EEEeccc----CCCCCCCc---cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCC
Q psy463          186 LILSHNQ----ESDGSTPV---DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANES  258 (790)
Q Consensus       186 ~~~~~~~----~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg  258 (790)
                      +|+....    ..|+..+.   .....+-++|.++.+.     ..++.                  ..+....+..||||
T Consensus       150 v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v-----~~qI~------------------Vgg~pd~~~~spdG  206 (595)
T 1fwx_A          150 VFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEV-----AWQVL------------------VSGNLDNCDADYEG  206 (595)
T ss_dssp             EEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEE-----EEEEE------------------ESSCCCCEEECSSS
T ss_pred             EEEecccccccCCCCcccccccccCceEEEEECCCCeE-----EEEEE------------------eCCCccceEECCCC
Confidence            6666322    23444333   3556788889887543     22222                  00122346789999


Q ss_pred             cEEEEEeccCcc-----------------------------------eEEEEEECCC--Cce-eEEEEEeCCCcccccCC
Q psy463          259 VVAAWVNRVQNR-----------------------------------ARITRCSINE--GTC-DVVFSRDLDRGWFEPFD  300 (790)
Q Consensus       259 ~~~~~~~r~~~~-----------------------------------~~i~~~~~~~--g~~-~~l~~~~~~~~~~~~~~  300 (790)
                      ++++.++.+.+.                                   ..+.++|..+  +.. ........      ...
T Consensus       207 k~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~------~Ph  280 (595)
T 1fwx_A          207 KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN------NPH  280 (595)
T ss_dssp             SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEES------SCC
T ss_pred             CEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCC------Cce
Confidence            988877654311                                   1367777776  333 22222211      145


Q ss_pred             ceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccC--C-----CcccccCCCeEEeEEEeeecCCCEEE
Q psy463          301 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD--K-----VPVPLTRGRFTVTEILAWDEKENNVY  373 (790)
Q Consensus       301 ~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~--~-----~~~~lt~~~~~~~~~~~~s~dg~~l~  373 (790)
                      ...+|||||+++ ...     .+      -.++.++|+++.+....  .     ....+..|.. .. ..+|++|| .+|
T Consensus       281 Gv~~sPDGk~v~-V~~-----~~------s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g-P~-h~aF~~dG-~aY  345 (595)
T 1fwx_A          281 GCNMAPDKKHLC-VAG-----KL------SPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG-PL-HTAFDGRG-NAY  345 (595)
T ss_dssp             CEEECTTSSEEE-EEC-----TT------SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC-EE-EEEECTTS-EEE
T ss_pred             EEEEcCCCCEEE-EeC-----CC------CCeEEEEECcccccccccccCcccceEEEcCCCCC-cc-eEEECCCC-eEE
Confidence            799999999887 343     23      34799999875410000  0     0112222222 12 36899999 554


Q ss_pred             EEEcCCCCceEEEEEEEcCC
Q psy463          374 FLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       374 ~~~~~~~~~~~~l~~~~~~~  393 (790)
                      .+..-.    .++..++++.
T Consensus       346 ~t~~ld----sqV~kwdi~~  361 (595)
T 1fwx_A          346 TSLFLD----SQVVKWNIED  361 (595)
T ss_dssp             EEETTT----TEEEEEEHHH
T ss_pred             EEEecC----CcEEEEEhhH
Confidence            444333    3566666643

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=97.95  E-value=0.00035  Score=70.96  Aligned_cols=180  Identities=14%  Similarity=0.120  Sum_probs=96.5

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc---cccccCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS---HNQESDG  323 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~---~~~~~~g  323 (790)
                      .....+.++|||++++.....   ..|++++.+ |+.+.+..... ..-......+.++|||+ |+++-+   ...+..+
T Consensus        86 ~~~~gl~~d~dG~l~v~~~~~---~~v~~~~~~-g~~~~~~~~~~-~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~  159 (305)
T 3dr2_A           86 AFTNGNAVDAQQRLVHCEHGR---RAITRSDAD-GQAHLLVGRYA-GKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQG  159 (305)
T ss_dssp             SCEEEEEECTTSCEEEEETTT---TEEEEECTT-SCEEEEECEET-TEECSCCCCEEECTTSC-EEEECCSGGGSCGGGS
T ss_pred             CccceeeECCCCCEEEEECCC---CEEEEECCC-CCEEEEEeccC-CCccCCCCCEEECCCCC-EEEeCcCCCccccccc
Confidence            345678999999954443221   238889886 66665543321 11111134689999998 554311   0000000


Q ss_pred             C--CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCC-CceEEEEEEEcCCCCCCcce
Q psy463          324 S--TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS-PIVQHMYRINIADPTATPEC  400 (790)
Q Consensus       324 ~--~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~~~~l~~~~~~~~~~~~~~  400 (790)
                      .  ........||+++.++++      .+.+. + ......++|+||++.||+...... .....|+++++++  +.   
T Consensus       160 ~~~~~~~~~~~v~~~d~~~g~------~~~~~-~-~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~--~~---  226 (305)
T 3dr2_A          160 CPADPELAHHSVYRLPPDGSP------LQRMA-D-LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD--GA---  226 (305)
T ss_dssp             CCCCCSSSCEEEEEECSSSCC------CEEEE-E-ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET--TE---
T ss_pred             cccccccCCCeEEEEcCCCCc------EEEEe-c-CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC--CC---
Confidence            0  000003579999987776      55554 2 222233789999999988766421 0114788888765  22   


Q ss_pred             eeec--ccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463          401 ITCD--LLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       401 lt~~--~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                      ++..  +...  .......+.++++|+.++..     ...|++++.+++.+..+
T Consensus       227 l~~~~~~~~~--~~~~pdgi~~d~~G~lwv~~-----~~gv~~~~~~g~~~~~~  273 (305)
T 3dr2_A          227 LHDRRHFASV--PDGLPDGFCVDRGGWLWSSS-----GTGVCVFDSDGQLLGHI  273 (305)
T ss_dssp             EEEEEEEECC--SSSCCCSEEECTTSCEEECC-----SSEEEEECTTSCEEEEE
T ss_pred             ccCCeEEEEC--CCCCCCeEEECCCCCEEEec-----CCcEEEECCCCCEEEEE
Confidence            2110  0000  11223347788898843322     23488888876655544

>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*

Probab=97.95  E-value=7.1e-05  Score=71.95  Aligned_cols=145  Identities=18%  Similarity=0.113  Sum_probs=86.0

Q ss_pred             EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccc-cccc-------------cchHHHHHhcCCeEEEE
Q psy463          473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVT-ERFS-------------VDWNLYLADNKDIVVAY  538 (790)
Q Consensus       473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~-~~~~-------------~~~~~~~~~~~G~~v~~  538 (790)
                      +.+....+..+.+|.+...+    .....|++++++||||...+. ..+.             ......-+. +-..++.
T Consensus        24 ~~v~~~~~~~lFywf~es~~----~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~-~~anvlf   98 (255)
T 1whs_A           24 ITVDEGAGRSLFYLLQEAPE----DAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWN-KVANVLF   98 (255)
T ss_dssp             EEEETTTTEEEEEEEECCCG----GGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGG-GTSEEEE
T ss_pred             EECCCCCCcEEEEEEEEecC----CCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCccccc-ccCCEEE
Confidence            34443357788888886543    234679999999999985532 1100             000011111 2467999


Q ss_pred             EcC-CCCCCChhhhHhhhhccC-CccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc-----CCCCceE
Q psy463          539 IDG-RNSALKGNTLKYAGYRRL-GTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL-----DPSNVFK  611 (790)
Q Consensus       539 ~d~-rG~~~~g~~~~~~~~~~~-~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~-----~p~~~~~  611 (790)
                      +|. .|.|.+-.. ....+... ....+.|+...++...++++.....++.|+|.||||..+..+|..     .+.-.++
T Consensus        99 iDqPvGtGfSy~~-~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLk  177 (255)
T 1whs_A           99 LDSPAGVGFSYTN-TSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLK  177 (255)
T ss_dssp             ECCSTTSTTCEES-SGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred             EecCCCCccCCCc-CccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccc
Confidence            995 576643111 01111011 113456666666655555776666789999999999987665532     1223688


Q ss_pred             EEEEeCCCCCcc
Q psy463          612 CGISVAPVTDWI  623 (790)
Q Consensus       612 ~~v~~~~~~~~~  623 (790)
                      +++.++|+++..
T Consensus       178 Gi~ign~~~d~~  189 (255)
T 1whs_A          178 GFMVGNGLIDDY  189 (255)
T ss_dssp             EEEEEEECCBHH
T ss_pred             eEEecCCccCHH
Confidence            999999988754

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.94  E-value=0.0014  Score=69.26  Aligned_cols=188  Identities=13%  Similarity=0.068  Sum_probs=116.0

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCC--
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEG--  281 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g--  281 (790)
                      ..|.++++++...      ..+.                 ........++|.+.+..++|++...+  .|+++++++.  
T Consensus        92 ~~I~~i~l~~~~~------~~~~-----------------~~~~~~~~l~~d~~~~~lywsD~~~~--~I~~~~~~g~~~  146 (400)
T 3p5b_L           92 HEVRKMTLDRSEY------TSLI-----------------PNLRNVVALDTEVASNRIYWSDLSQR--MICSTQLDRAHG  146 (400)
T ss_dssp             TEEEEECTTSCSC------EEEE-----------------CSCSCEEEEEEETTTTEEEEEETTTT--EEEEEEC-----
T ss_pred             ceeEEEccCCcce------eEec-----------------cccCcceEEeeeeccCceEEEecCCC--eEEEEEcccCCC
Confidence            6889999887642      2222                 23344568899998888888876433  4888888763  


Q ss_pred             --ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE
Q psy463          282 --TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV  359 (790)
Q Consensus       282 --~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~  359 (790)
                        ....+.....     ......++.+.++.||++-.      +      ...|.+++++++.      .+.+.......
T Consensus       147 ~~~~~~~~~~~~-----~~p~glavD~~~~~lY~~d~------~------~~~I~~~~~~g~~------~~~l~~~~~~~  203 (400)
T 3p5b_L          147 VSSYDTVISRDI-----QAPDGLAVDWIHSNIYWTDS------V------LGTVSVADTKGVK------RKTLFRENGSK  203 (400)
T ss_dssp             -CCCEEEECSSC-----SCEEEEEEETTTTEEEEEET------T------TTEEEEECTTTCS------EEEEEECSSCC
T ss_pred             CCcceEEEeCCC-----CCcccEEEEecCCceEEEEC------C------CCeEEEEeCCCCc------eEEEEeCCCCC
Confidence              2333332111     01235678877777875433      2      3479999998765      44443322222


Q ss_pred             eEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeE
Q psy463          360 TEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEI  439 (790)
Q Consensus       360 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i  439 (790)
                      ...++.+|.++.||++.....   ..|+++++++  ...+.+...      +...-..++++++++.|+++..  ....|
T Consensus       204 P~~iavdp~~g~ly~td~~~~---~~I~~~~~dG--~~~~~~~~~------~l~~P~glavd~~~~~lY~aD~--~~~~I  270 (400)
T 3p5b_L          204 PRAIVVDPVHGFMYWTDWGTP---AKIKKGGLNG--VDIYSLVTE------NIQWPNGITLDLLSGRLYWVDS--KLHSI  270 (400)
T ss_dssp             EEEEEEETTTTEEEEEECSSS---CCEEEEETTS--CSCEEEECS------SCSCEEEEEEETTTTEEEEEET--TTTEE
T ss_pred             cceEEEecccCeEEEEeCCCC---CEEEEEeCCC--CccEEEEEC------CCCceEEEEEEeCCCEEEEEEC--CCCEE
Confidence            223788998888988765422   4799999987  344444321      2234567899999888877632  24679


Q ss_pred             EEEecCCCeEEEe
Q psy463          440 MLFDKTGQRLLYW  452 (790)
Q Consensus       440 ~~~~~~~~~~~~l  452 (790)
                      +++++++...+.+
T Consensus       271 ~~~d~dG~~~~~~  283 (400)
T 3p5b_L          271 SSIDVNGGNRKTI  283 (400)
T ss_dssp             EEEETTSCCCEEE
T ss_pred             EEEeCCCCccEEE
Confidence            9999987544433

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.93  E-value=0.0039  Score=65.03  Aligned_cols=90  Identities=9%  Similarity=0.015  Sum_probs=49.2

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEecc----------------
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRV----------------  267 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~----------------  267 (790)
                      ..|.++|.++.+.+..                  |..- ......-..+.|+||++.++.++.+                
T Consensus       164 g~v~vlD~~T~~v~~~------------------~~~~-~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~  224 (462)
T 2ece_A          164 GGILMLDHYSFEPLGK------------------WEID-RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKD  224 (462)
T ss_dssp             CEEEEECTTTCCEEEE------------------CCSB-CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHH
T ss_pred             CeEEEEECCCCeEEEE------------------EccC-CCCccccceEEECCCCCEEEEccCcCccccccccchhhhhh
Confidence            6899999988764221                  1100 0111222357899999966655421                


Q ss_pred             CcceEEEEEECCCCceeEEEEEeCCCcccccCCce--eEccCCCEEEEEEc
Q psy463          268 QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHL--RFSSDGKKMLLILS  316 (790)
Q Consensus       268 ~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~--~~spDg~~i~~~~~  316 (790)
                      ....+|.++|+++++...-..... .+-.  ....  .++|||+.++ +..
T Consensus       225 ~~~d~V~v~D~~~~k~~~tI~vg~-~g~~--P~~i~f~~~Pdg~~aY-V~~  271 (462)
T 2ece_A          225 RYGNRIHFWDLRKRKRIHSLTLGE-ENRM--ALELRPLHDPTKLMGF-INM  271 (462)
T ss_dssp             HSCCEEEEEETTTTEEEEEEESCT-TEEE--EEEEEECSSTTCCEEE-EEE
T ss_pred             ccCCEEEEEECCCCcEeeEEecCC-CCCc--cceeEeeECCCCCEEE-EEE
Confidence            123569999999875443322210 0000  1123  4599999877 444

>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}

Probab=97.91  E-value=4.3e-05  Score=80.46  Aligned_cols=113  Identities=10%  Similarity=-0.119  Sum_probs=62.8

Q ss_pred             CccEEEEEcCCCCccc-----ccccccc--chHHHHHhcCCeEEEEEcCCCCCCChhhhHhh---h---hccCCc-----
Q psy463          500 KYPLLIHVYGGPSSFQ-----VTERFSV--DWNLYLADNKDIVVAYIDGRNSALKGNTLKYA---G---YRRLGT-----  561 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~-----~~~~~~~--~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~---~---~~~~~~-----  561 (790)
                      ..|.||++||..+...     ....|..  ......++++||.|+++|++|++.........   .   .+..+.     
T Consensus        51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~  130 (431)
T 2hih_A           51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK  130 (431)
T ss_dssp             CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred             CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence            3456889999876411     0123321  11334444589999999999977543211000   0   000000     


Q ss_pred             ----cchhHHHHHHHHHHHhCCCcC-CCceEEEEechHHHHHHHHHhc--------------------------CCCCce
Q psy463          562 ----VEIYDQINVTRYLQENLPYID-KTRTAIWGWSYGGYATGLALAL--------------------------DPSNVF  610 (790)
Q Consensus       562 ----~~~~D~~~~~~~l~~~~~~~d-~~ri~i~G~S~GG~~a~~~a~~--------------------------~p~~~~  610 (790)
                          ..+.|+.    .+++   ... ..++.|+||||||.++..++..                          +| ..+
T Consensus       131 ~~~~~~a~dl~----~ll~---~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p-~~V  202 (431)
T 2hih_A          131 YGHERYGKTYE----GVLK---DWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQD-NMV  202 (431)
T ss_dssp             HTCCSEEEEEC----CSCT---TCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCC-SCE
T ss_pred             CCHHHHHHHHH----HHHH---HhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcc-cce
Confidence                0001111    0111   122 3789999999999999998765                          45 378


Q ss_pred             EEEEEeCCCC
Q psy463          611 KCGISVAPVT  620 (790)
Q Consensus       611 ~~~v~~~~~~  620 (790)
                      +.++.+++..
T Consensus       203 ~slv~i~tP~  212 (431)
T 2hih_A          203 TSITTIATPH  212 (431)
T ss_dssp             EEEEEESCCT
T ss_pred             eEEEEECCCC
Confidence            8888887654

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.90  E-value=0.0024  Score=64.92  Aligned_cols=164  Identities=15%  Similarity=0.105  Sum_probs=104.5

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ...+.|.+.+..++|++-..  ..|++++++++.. +.+......     ....+++.+.+..|++.-.      +    
T Consensus        37 ~~~ld~d~~~~~lyw~D~~~--~~I~r~~~~g~~~~~~~~~~~l~-----~p~glavd~~~g~ly~~d~------~----   99 (318)
T 3sov_A           37 AAAVDFVFSHGLIYWSDVSE--EAIKRTEFNKTESVQNVVVSGLL-----SPDGLACDWLGEKLYWTDS------E----   99 (318)
T ss_dssp             EEEEEEEGGGTEEEEEETTT--TEEEEEETTSSSCCCEEEEECCS-----CCCEEEEETTTTEEEEEET------T----
T ss_pred             cEEEEEEeCCCEEEEEECCC--CcEEEEEccCCCceEEEEcCCCC-----CccEEEEEcCCCeEEEEEC------C----
Confidence            45788999888888887543  3499999987743 333332211     1346888888888885433      2    


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLT  407 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~  407 (790)
                        ...|.++++++..      .+.+..........++.+|.++.||++.....   ..|+++++++  ...+.+...   
T Consensus       100 --~~~I~~~~~dG~~------~~~l~~~~~~~P~giavdp~~g~ly~td~~~~---~~I~r~~~dG--~~~~~~~~~---  163 (318)
T 3sov_A          100 --TNRIEVSNLDGSL------RKVLFWQELDQPRAIALDPSSGFMYWTDWGEV---PKIERAGMDG--SSRFIIINS---  163 (318)
T ss_dssp             --TTEEEEEETTSCS------CEEEECSSCSSEEEEEEEGGGTEEEEEECSSS---CEEEEEETTS--CSCEEEECS---
T ss_pred             --CCEEEEEECCCCc------EEEEEeCCCCCccEEEEeCCCCEEEEEecCCC---CEEEEEEcCC--CCeEEEEEC---
Confidence              3479999988765      44443222222233788998888988764322   5899999987  333333221   


Q ss_pred             cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          408 SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                         +-..-..++++++++.|+++..  ....|+++++++...+
T Consensus       164 ---~l~~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~  201 (318)
T 3sov_A          164 ---EIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQ  201 (318)
T ss_dssp             ---SCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCE
T ss_pred             ---CCCCccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCceE
Confidence               2234467899999888877643  3468999998875443

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=97.87  E-value=0.001  Score=78.39  Aligned_cols=164  Identities=9%  Similarity=0.147  Sum_probs=97.5

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...+..+.|+| |++++....+.   .|.+.|+.++++...+...   +   ......|+|||+.|+ +.+    .+|  
T Consensus        58 ~~~V~~l~fsp-g~~L~S~s~D~---~v~lWd~~~~~~~~~~~~~---~---~V~~v~~sp~g~~l~-sgs----~dg--  120 (902)
T 2oaj_A           58 RSAIKEMRFVK-GIYLVVINAKD---TVYVLSLYSQKVLTTVFVP---G---KITSIDTDASLDWML-IGL----QNG--  120 (902)
T ss_dssp             CCCEEEEEEET-TTEEEEEETTC---EEEEEETTTCSEEEEEECS---S---CEEEEECCTTCSEEE-EEE----TTS--
T ss_pred             CCCEEEEEEcC-CCEEEEEECcC---eEEEEECCCCcEEEEEcCC---C---CEEEEEECCCCCEEE-EEc----CCC--
Confidence            44678999999 88555544332   3899999988765444321   1   244789999999887 555    456  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcc------------cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPV------------PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~------------~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                            .|.++|+++++      ..            .+..+...+.. ++|+|++..+++.+...    ..+ ..++..
T Consensus       121 ------~V~lwd~~~~~------~~~~~i~~~~~~~~~~~~h~~~V~s-l~~sp~~~~~l~~g~~d----g~v-lWd~~~  182 (902)
T 2oaj_A          121 ------SMIVYDIDRDQ------LSSFKLDNLQKSSFFPAARLSPIVS-IQWNPRDIGTVLISYEY----VTL-TYSLVE  182 (902)
T ss_dssp             ------CEEEEETTTTE------EEEEEECCHHHHHTCSSSCCCCCCE-EEEETTEEEEEEEECSS----CEE-EEETTT
T ss_pred             ------cEEEEECCCCc------cccceeccccccccccccCCCCeEE-EEEccCCCCEEEEEeCC----CcE-EEECCC
Confidence                  58889988765      21            12222233444 88999764444444432    244 556654


Q ss_pred             CCCCcc-eeeeccc-----------ccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          394 PTATPE-CITCDLL-----------TSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       394 ~~~~~~-~lt~~~~-----------~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                        ++.. .+.....           ........+..+.|+|||++++.....   ..|.++|+.+++.
T Consensus       183 --~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D---g~i~lWd~~~g~~  245 (902)
T 2oaj_A          183 --NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED---NSLVFWDANSGHM  245 (902)
T ss_dssp             --TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT---CCEEEEETTTCCE
T ss_pred             --CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC---CeEEEEECCCCcE
Confidence              3221 1111000           000012457889999999988665433   3588999876544

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=97.87  E-value=0.002  Score=75.90  Aligned_cols=196  Identities=8%  Similarity=0.045  Sum_probs=109.5

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      .+|+|||+.|+..+. +            +.|.+++..+..     ....+ .+...+ .-+.|.+ ++   ++++..  
T Consensus        23 lafspdg~~lAsgs~-D------------g~I~lw~~~~~~-----~~~~~-~~~~~V-~~l~fsp-g~---~L~S~s--   76 (902)
T 2oaj_A           23 AAFDFTQNLLAIATV-T------------GEVHIYGQQQVE-----VVIKL-EDRSAI-KEMRFVK-GI---YLVVIN--   76 (902)
T ss_dssp             EEEETTTTEEEEEET-T------------SEEEEECSTTCE-----EEEEC-SSCCCE-EEEEEET-TT---EEEEEE--
T ss_pred             EEECCCCCEEEEEeC-C------------CEEEEEeCCCcE-----EEEEc-CCCCCE-EEEEEcC-CC---EEEEEE--
Confidence            489999998775432 1            268888876542     11111 122222 3346666 32   222221  


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                              ....|.+.|+.+++..     ..+.                  ....+..+.|+|||++++....+..   |
T Consensus        77 --------~D~~v~lWd~~~~~~~-----~~~~------------------~~~~V~~v~~sp~g~~l~sgs~dg~---V  122 (902)
T 2oaj_A           77 --------AKDTVYVLSLYSQKVL-----TTVF------------------VPGKITSIDTDASLDWMLIGLQNGS---M  122 (902)
T ss_dssp             --------TTCEEEEEETTTCSEE-----EEEE------------------CSSCEEEEECCTTCSEEEEEETTSC---E
T ss_pred             --------CcCeEEEEECCCCcEE-----EEEc------------------CCCCEEEEEECCCCCEEEEEcCCCc---E
Confidence                    1157788888876521     1111                  2245789999999996666544332   8


Q ss_pred             EEEECCCCceeEEEEE------eCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCC
Q psy463          274 TRCSINEGTCDVVFSR------DLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK  347 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~------~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~  347 (790)
                      .++|+.++.+......      ....+........+|+|++..++++.+    .+|        .+ ++|+.+++.    
T Consensus       123 ~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~----~dg--------~v-lWd~~~~~~----  185 (902)
T 2oaj_A          123 IVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY----EYV--------TL-TYSLVENEI----  185 (902)
T ss_dssp             EEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC----SSC--------EE-EEETTTTEE----
T ss_pred             EEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe----CCC--------cE-EEECCCCce----
Confidence            8999998876422110      000111123558999998654443554    455        57 999887651    


Q ss_pred             CcccccCC------------------CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          348 VPVPLTRG------------------RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       348 ~~~~lt~~------------------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                       .+.+...                  ...+.. ++|+|||+.|+-.+.++     .|...++..
T Consensus       186 -~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~-v~fspdg~~lasgs~Dg-----~i~lWd~~~  242 (902)
T 2oaj_A          186 -KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQ-SLYHPNSLHIITIHEDN-----SLVFWDANS  242 (902)
T ss_dssp             -EEEECCCBCTTCCCSTTCCCTTSCBCCCEEE-EEECTTSSEEEEEETTC-----CEEEEETTT
T ss_pred             -EEEEecccCCcCCCcccccccccccCCCeEE-EEEcCCCCEEEEEECCC-----eEEEEECCC
Confidence             2222211                  122444 89999999887776663     344455544

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.86  E-value=0.064  Score=59.81  Aligned_cols=164  Identities=10%  Similarity=0.099  Sum_probs=104.8

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      ...+.+.+.+..++|++...  ..|+++++++...+.+.....     ......++.+.++.||++-+      +     
T Consensus       351 ~~~ld~d~~~~~ly~sD~~~--~~I~r~~~~g~~~~~v~~~~~-----~~p~GlAvD~~~~~lY~tD~------~-----  412 (619)
T 3s94_A          351 AIAIDYDPVEGYIYWTDDEV--RAIRRSFIDGSGSQFVVTAQI-----AHPDGIAVDWVARNLYWTDT------G-----  412 (619)
T ss_dssp             EEEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECSSC-----SCCCEEEEETTTTEEEEEET------T-----
T ss_pred             cEEEEEEcCCCeEEEEeCCC--CeEEEEEcCCCccEEEEECCC-----CCcCceEEecccCcEEEEeC------C-----
Confidence            45678888777778876543  349999998866655553221     11346788887888885332      3     


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccccc
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTS  408 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~  408 (790)
                       ...|.+++++++.      .+.|..........++.+|....||++.....   ..|+++++++  ...+.+...    
T Consensus       413 -~~~I~v~~~~G~~------~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~---~~I~r~~~dG--~~~~~l~~~----  476 (619)
T 3s94_A          413 -TDRIEVTRLNGTM------RKILISEDLEEPRAIVLDPMVGYMYWTDWGEI---PKIERAALDG--SDRVVLVNT----  476 (619)
T ss_dssp             -TTEEEEEETTSCS------CEEEECTTCCSEEEEEEETTTTEEEEEECSSS---CEEEEEETTS--CSCEEEECS----
T ss_pred             -CCcEEEEeCCCCe------EEEEEECCCCCeeeEEEEcCCCcEEEecCCCC---CEEEEEccCC--CccEEEEeC----
Confidence             3479999988765      44444333322333788998778988865432   5799999987  344444331    


Q ss_pred             CCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          409 ANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       409 ~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                        ....-..++++++++.|+++...  ...|..+++++...+
T Consensus       477 --~l~~P~GlalD~~~~~LY~aD~~--~~~I~~~~~dG~~~~  514 (619)
T 3s94_A          477 --SLGWPNGLALDYDEGKIYWGDAK--TDKIEVMNTDGTGRR  514 (619)
T ss_dssp             --SCSCEEEEEEETTTTEEEEEETT--TTEEEEEESSSCCCE
T ss_pred             --CCCCCeeeEEcccCCEEEEEECC--CCEEEEEecCCCceE
Confidence              22345568899988888665333  457888888775443

>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A

Probab=97.84  E-value=6.5e-05  Score=77.90  Aligned_cols=107  Identities=10%  Similarity=-0.020  Sum_probs=60.9

Q ss_pred             ccEEEEEcCCCCcccc----ccccccc--hHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHH-
Q psy463          501 YPLLIHVYGGPSSFQV----TERFSVD--WNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRY-  573 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~----~~~~~~~--~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~-  573 (790)
                      .+.||++||..+....    ...|...  .....++++||.|+++|++|++.....             ..++...++. 
T Consensus         6 ~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~~-------------a~~l~~~i~~~   72 (387)
T 2dsn_A            6 DAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDR-------------ACEAYAQLVGG   72 (387)
T ss_dssp             CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHHH-------------HHHHHHHHHCE
T ss_pred             CCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcccc-------------HHHHHHHHHhh
Confidence            3458899998765210    0123211  112344457999999999997643211             1111111110 


Q ss_pred             -------HHHh-------------CCC-cCCCceEEEEechHHHHHHHHHhc-------------------CC-----CC
Q psy463          574 -------LQEN-------------LPY-IDKTRTAIWGWSYGGYATGLALAL-------------------DP-----SN  608 (790)
Q Consensus       574 -------l~~~-------------~~~-~d~~ri~i~G~S~GG~~a~~~a~~-------------------~p-----~~  608 (790)
                             +.+.             ... ....++.|+||||||.++..++.+                   +|     .+
T Consensus        73 ~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~  152 (387)
T 2dsn_A           73 TVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHH  152 (387)
T ss_dssp             EEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCC
T ss_pred             hhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCcccccccc
Confidence                   1000             000 234799999999999999998872                   23     14


Q ss_pred             ceEEEEEeCCCC
Q psy463          609 VFKCGISVAPVT  620 (790)
Q Consensus       609 ~~~~~v~~~~~~  620 (790)
                      +++.++.+++..
T Consensus       153 ~V~sLV~i~tP~  164 (387)
T 2dsn_A          153 FVLSVTTIATPH  164 (387)
T ss_dssp             CEEEEEEESCCT
T ss_pred             ceeEEEEECCCC
Confidence            788888777654

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=97.83  E-value=0.00063  Score=70.74  Aligned_cols=168  Identities=13%  Similarity=0.041  Sum_probs=100.1

Q ss_pred             CCCEEEEEEEccC---Cc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccC----CCEEEEEEc
Q psy463          245 VEPVLSRVNWANE---SV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD----GKKMLLILS  316 (790)
Q Consensus       245 ~~~~~~~~~wspD---g~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spD----g~~i~~~~~  316 (790)
                      ....+..+.|+|+   +. .++......   .|.++++.+++.....................|+||    |+.|+ +.+
T Consensus        17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~---~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~-~~~   92 (366)
T 3k26_A           17 HNQPLFGVQFNWHSKEGDPLVFATVGSN---RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLA-VAG   92 (366)
T ss_dssp             TCSCEEEEEECTTCCTTSCEEEEEEETT---EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEE-EEE
T ss_pred             CCCceEEEEEecccCCCCceEEEECCCC---EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEE-Eec
Confidence            3456789999985   55 333333222   388888887665433332111101112447899999    55555 554


Q ss_pred             cccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeec-CCCEEEEEEcCCCCceEEEEEEEcCCCC
Q psy463          317 HNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE-KENNVYFLSTQGSPIVQHMYRINIADPT  395 (790)
Q Consensus       317 ~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~  395 (790)
                          .+|        .|.++|+.+++     ....+......+.. +.|+| +++.|+..+.++     .|...++..  
T Consensus        93 ----~dg--------~i~v~d~~~~~-----~~~~~~~~~~~i~~-~~~~~~~~~~l~s~~~dg-----~i~iwd~~~--  147 (366)
T 3k26_A           93 ----SRG--------IIRIINPITMQ-----CIKHYVGHGNAINE-LKFHPRDPNLLLSVSKDH-----ALRLWNIQT--  147 (366)
T ss_dssp             ----TTC--------EEEEECTTTCC-----EEEEEESCCSCEEE-EEECSSCTTEEEEEETTS-----CEEEEETTT--
T ss_pred             ----CCC--------EEEEEEchhce-----EeeeecCCCCcEEE-EEECCCCCCEEEEEeCCC-----eEEEEEeec--
Confidence                456        78999998776     23345444445554 88999 888777666653     455566654  


Q ss_pred             CCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          396 ATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       396 ~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      ++......   ........+..+.|+|++++++.....   ..|.++++.++
T Consensus       148 ~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~  193 (366)
T 3k26_A          148 DTLVAIFG---GVEGHRDEVLSADYDLLGEKIMSCGMD---HSLKLWRINSK  193 (366)
T ss_dssp             TEEEEEEC---STTSCSSCEEEEEECTTSSEEEEEETT---SCEEEEESCSH
T ss_pred             CeEEEEec---ccccccCceeEEEECCCCCEEEEecCC---CCEEEEECCCC
Confidence            33222210   001245678889999999988665432   35888887653

>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5

Probab=97.80  E-value=0.00013  Score=77.38  Aligned_cols=147  Identities=13%  Similarity=0.114  Sum_probs=84.6

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-------------cchHHHHHhcCCeEE
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-------------VDWNLYLADNKDIVV  536 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-------------~~~~~~~~~~~G~~v  536 (790)
                      .+.-.++..++..+.++.+...+    .....|+++++|||||...+...+.             ......-+. .-..+
T Consensus        21 ~~sGyv~v~~~~~lfy~f~~s~~----~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~-~~~~~   95 (452)
T 1ivy_A           21 QYSGYLKSSGSKHLHYWFVESQK----DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWN-LIANV   95 (452)
T ss_dssp             EEEEEEECSTTEEEEEEEECCSS----CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGG-GSSEE
T ss_pred             eeEEEEeeCCCCeEEEEEEEcCC----CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCccc-ccccE
Confidence            34455666667888888775543    2345799999999999754211110             000001111 34679


Q ss_pred             EEEcC-CCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc---CCCCceEE
Q psy463          537 AYIDG-RNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL---DPSNVFKC  612 (790)
Q Consensus       537 ~~~d~-rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~---~p~~~~~~  612 (790)
                      +.+|. +|+|.+-..  ...+..-....+.|...++......++.....++.|+|+||||..+..+|..   .+.-.+++
T Consensus        96 lfiDqP~GtGfS~~~--~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g  173 (452)
T 1ivy_A           96 LYLESPAGVGFSYSD--DKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQG  173 (452)
T ss_dssp             EEECCSTTSTTCEES--SCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEE
T ss_pred             EEEecCCCCCcCCcC--CCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccce
Confidence            99995 676653211  0000000012234444444433333666667899999999999955444432   23347899


Q ss_pred             EEEeCCCCCcc
Q psy463          613 GISVAPVTDWI  623 (790)
Q Consensus       613 ~v~~~~~~~~~  623 (790)
                      +++++|+++..
T Consensus       174 ~~ign~~~d~~  184 (452)
T 1ivy_A          174 LAVGNGLSSYE  184 (452)
T ss_dssp             EEEESCCSBHH
T ss_pred             EEecCCccChh
Confidence            99999998754

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=97.78  E-value=0.0026  Score=67.36  Aligned_cols=171  Identities=9%  Similarity=0.011  Sum_probs=95.8

Q ss_pred             EEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCccc
Q psy463          252 VNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWD  331 (790)
Q Consensus       252 ~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~  331 (790)
                      ++|+|||+.+++.+...+. .|++++..++............. .......+++|++..|++ ..    ..+        
T Consensus       176 ia~~~~g~~l~~~d~~~~~-~I~~~d~~~~~~~~~~g~~~~~~-~~~p~~iav~p~~g~lyv-~d----~~~--------  240 (409)
T 3hrp_A          176 PAVTKDKQRVYSIGWEGTH-TVYVYMKASGWAPTRIGQLGSTF-SGKIGAVALDETEEWLYF-VD----SNK--------  240 (409)
T ss_dssp             CEECTTSSEEEEEBSSTTC-EEEEEEGGGTTCEEEEEECCTTS-CSCCCBCEECTTSSEEEE-EC----TTC--------
T ss_pred             eeEecCCCcEEEEecCCCc-eEEEEEcCCCceeEEeeeccchh-cCCcEEEEEeCCCCeEEE-EE----CCC--------
Confidence            8899999977777654322 59999988765432221110000 111347899997667774 32    334        


Q ss_pred             EEEEEEcCCCCcccCCCcccc----cCCCeEEe-E-EEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463          332 HLTFIDLDDQAGIKDKVPVPL----TRGRFTVT-E-ILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL  405 (790)
Q Consensus       332 ~l~~~d~~~~~~~~~~~~~~l----t~~~~~~~-~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~  405 (790)
                      .|+++|++++.      ...+    ..+..... . .++|+|+++.||+.....    ..|++++.++   +...+....
T Consensus       241 ~I~~~d~~~~~------~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~----~~I~~~~~~g---~~~~~~g~~  307 (409)
T 3hrp_A          241 NFGRFNVKTQE------VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL----SSVYKITPDG---ECEWFCGSA  307 (409)
T ss_dssp             EEEEEETTTCC------EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT----TEEEEECTTC---CEEEEEECT
T ss_pred             cEEEEECCCCC------EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC----CEEEEEecCC---CEEEEEeCC
Confidence            79999988765      3333    22111111 1 378999878888876543    4788888765   222221100


Q ss_pred             --cccC------CCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463          406 --LTSA------NQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       406 --~~~~------~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                        ....      ..-..-..+.++++|+ ++++ +......|+++++.++++..+
T Consensus       308 ~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyva-d~~~~~~I~~~~~~~G~v~~~  360 (409)
T 3hrp_A          308 TQKTVQDGLREEALFAQPNGMTVDEDGN-FYIV-DGFKGYCLRKLDILDGYVSTV  360 (409)
T ss_dssp             TCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEE-ETTTTCEEEEEETTTTEEEEE
T ss_pred             CCCCcCCCcccccEeCCCeEEEEeCCCC-EEEE-eCCCCCEEEEEECCCCEEEEE
Confidence              0000      0012345688999998 4333 321345678887655555433

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=97.78  E-value=0.0018  Score=63.13  Aligned_cols=197  Identities=11%  Similarity=0.043  Sum_probs=105.0

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecc--ccceEEEEEEeeeccCCccEEEEecc
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT--RGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt--~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+||| +||.++...+          ...|..+|+.+++     +...+.  .+.+.  .-..++  ++  .+|+..-
T Consensus        26 l~~~~dg-~Lyvstg~~~----------~s~v~~iD~~tg~-----v~~~i~l~~~~fg--eGi~~~--g~--~lyv~t~   83 (266)
T 2iwa_A           26 LVYAEND-TLFESTGLYG----------RSSVRQVALQTGK-----VENIHKMDDSYFG--EGLTLL--NE--KLYQVVW   83 (266)
T ss_dssp             EEECSTT-EEEEEECSTT----------TCEEEEEETTTCC-----EEEEEECCTTCCE--EEEEEE--TT--EEEEEET
T ss_pred             EEEeCCC-eEEEECCCCC----------CCEEEEEECCCCC-----EEEEEecCCCcce--EEEEEe--CC--EEEEEEe
Confidence            4678885 5555443222          1389999999884     333332  22221  112222  33  3444431


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCC-CCCEEEEEEEccCCcEEEEEeccCcc
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENN-VEPVLSRVNWANESVVAAWVNRVQNR  270 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~-~~~~~~~~~wspDg~~~~~~~r~~~~  270 (790)
                                ....++++|.++.+..     .++..                . ..+    ...++||+.++.++ +  .
T Consensus        84 ----------~~~~v~viD~~t~~v~-----~~i~~----------------g~~~g----~glt~Dg~~l~vs~-g--s  125 (266)
T 2iwa_A           84 ----------LKNIGFIYDRRTLSNI-----KNFTH----------------QMKDG----WGLATDGKILYGSD-G--T  125 (266)
T ss_dssp             ----------TCSEEEEEETTTTEEE-----EEEEC----------------CSSSC----CEEEECSSSEEEEC-S--S
T ss_pred             ----------cCCEEEEEECCCCcEE-----EEEEC----------------CCCCe----EEEEECCCEEEEEC-C--C
Confidence                      1268999999876532     12220                1 111    23678999555555 3  3


Q ss_pred             eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463          271 ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  350 (790)
Q Consensus       271 ~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~  350 (790)
                      ..|+++|.++.+...-........-........|. || .|+ ...   ...        ..|.++|+++++-     ..
T Consensus       126 ~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~ly-vn~---~~~--------~~V~vID~~tg~V-----~~  186 (266)
T 2iwa_A          126 SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVW-ANI---WQT--------DCIARISAKDGTL-----LG  186 (266)
T ss_dssp             SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEE-EEE---TTS--------SEEEEEETTTCCE-----EE
T ss_pred             CeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEE-Eec---CCC--------CeEEEEECCCCcE-----EE
Confidence            36999999987654333221100000001245677 77 465 332   122        3799999998871     22


Q ss_pred             cccCC------------CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          351 PLTRG------------RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       351 ~lt~~------------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      .+..+            ...+..-++++|+++++|.+... .   .+|+.+++..
T Consensus       187 ~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~-~---~~v~~i~l~~  237 (266)
T 2iwa_A          187 WILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL-W---PKLFEIKLHL  237 (266)
T ss_dssp             EEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT-C---SEEEEEEEEE
T ss_pred             EEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC-C---CeEEEEEEec
Confidence            23211            11223338999999987776544 3   4788887754

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=97.75  E-value=0.0097  Score=60.82  Aligned_cols=164  Identities=12%  Similarity=0.155  Sum_probs=92.9

Q ss_pred             CCCCEEEEEEEcc--CCcEEEEEeccCcceEEEEEECCCCce-------eEEEEEeCCCcccccCCceeEccC--CCEEE
Q psy463          244 NVEPVLSRVNWAN--ESVVAAWVNRVQNRARITRCSINEGTC-------DVVFSRDLDRGWFEPFDHLRFSSD--GKKML  312 (790)
Q Consensus       244 ~~~~~~~~~~wsp--Dg~~~~~~~r~~~~~~i~~~~~~~g~~-------~~l~~~~~~~~~~~~~~~~~~spD--g~~i~  312 (790)
                      .....+..+.|+|  ||++++....+.   .|.++++.+++.       +.+.......   .......|+|+  |+.|+
T Consensus        55 ~~~~~v~~~~~~~~~d~~~l~s~~~dg---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~  128 (351)
T 3f3f_A           55 AHDSSIVAIDWASPEYGRIIASASYDK---TVKLWEEDPDQEECSGRRWNKLCTLNDSK---GSLYSVKFAPAHLGLKLA  128 (351)
T ss_dssp             CCSSCEEEEEECCGGGCSEEEEEETTS---CEEEEEECTTSCTTSSCSEEEEEEECCCS---SCEEEEEECCGGGCSEEE
T ss_pred             cCCCcEEEEEEcCCCCCCEEEEEcCCC---eEEEEecCCCcccccccCcceeeeecccC---CceeEEEEcCCCCCcEEE
Confidence            4456688999999  688666554432   277788777632       2222222111   12447899999  88777


Q ss_pred             EEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc-------------CCCeEEeEEEeeecC---CCEEEEEE
Q psy463          313 LILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT-------------RGRFTVTEILAWDEK---ENNVYFLS  376 (790)
Q Consensus       313 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-------------~~~~~~~~~~~~s~d---g~~l~~~~  376 (790)
                       +.+    .+|        .|.++|+.+++.     ...+.             .....+. .+.|+|+   ++.++..+
T Consensus       129 -~~~----~dg--------~v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~l~~~~  189 (351)
T 3f3f_A          129 -CLG----NDG--------ILRLYDALEPSD-----LRSWTLTSEMKVLSIPPANHLQSDF-CLSWCPSRFSPEKLAVSA  189 (351)
T ss_dssp             -EEE----TTC--------EEEEEECSSTTC-----TTCCEEEEEEESCSCCCSSCSCCCE-EEEECCCSSSCCEEEEEE
T ss_pred             -Eec----CCC--------cEEEecCCChHH-----hccccccccccccccccCCccccee-EEEeccCCCCCcEEEEec
Confidence             454    456        688999877651     11111             1112223 3789997   77666666


Q ss_pred             cCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCC----cEEEEEeecCCCCeEEEEecCC
Q psy463          377 TQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNV----SYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       377 ~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg----~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      ..     ..+.......  ++...+..    ..+....+..+.|+|++    ++++.. ...  ..|.++++..
T Consensus       190 ~~-----~~~~~~~~~~--~~~~~~~~----~~~h~~~i~~~~~~p~~~~~~~~l~s~-~~d--g~i~iwd~~~  249 (351)
T 3f3f_A          190 LE-----QAIIYQRGKD--GKLHVAAK----LPGHKSLIRSISWAPSIGRWYQLIATG-CKD--GRIRIFKITE  249 (351)
T ss_dssp             TT-----EEEEEEECTT--SCEEEEEE----CCCCCSCEEEEEECCCSSCSSEEEEEE-ETT--SCEEEEEEEE
T ss_pred             CC-----CcEEEEccCC--Cceeeeee----cCCCCcceeEEEECCCCCCcceEEEEE-cCC--CeEEEEeCCC
Confidence            55     3333333333  33322222    11245678889999998    555443 322  3467777654

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.75  E-value=0.0093  Score=68.28  Aligned_cols=121  Identities=9%  Similarity=0.065  Sum_probs=80.1

Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  330 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~  330 (790)
                      .++..+.++.++|++...+  +|.++++++...+.|......     ....+++.|.+..||++-.      |.     .
T Consensus       475 GLAvD~~~~~LY~tD~~~~--~I~v~~ldG~~~~~l~~~~l~-----~P~gIaVDp~~g~LYwtD~------g~-----~  536 (791)
T 3m0c_C          475 GLAVDWIHSNIYWTDSVLG--TVSVADTKGVKRKTLFRENGS-----KPRAIVVDPVHGFMYWTDW------GT-----P  536 (791)
T ss_dssp             EEEEETTTTEEEEEETTTT--EEEEEETTSSSEEEEEECTTC-----CEEEEEEETTTTEEEEEEC------SS-----S
T ss_pred             eeeeeecCCcEEEEecCCC--eEEEEeCCCCeEEEEEeCCCC-----CcceEEEecCCCCEEEecC------CC-----C
Confidence            4667778888888876543  599999998777666653221     1236889998888875432      21     2


Q ss_pred             cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                      ..|+++++++..      .+.|..........++++++++.||+.-...    ..|+++++++  ...+.+
T Consensus       537 ~~I~~~~~dG~~------~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~----~~I~~~d~dG--~~~~~v  595 (791)
T 3m0c_C          537 AKIKKGGLNGVD------IYSLVTENIQWPNGITLDLLSGRLYWVDSKL----HSISSIDVNG--GNRKTI  595 (791)
T ss_dssp             CEEEEEETTSCC------EEEEECSSCSCEEEEEEETTTTEEEEEETTT----TEEEEEETTS--CSCEEE
T ss_pred             CeEEEEecCCCc------eEEEEeCCCCCceEEEEecCCCeEEEEeCCC----CcEEEEecCC--CceEEE
Confidence            479999998765      4444433322222378898899999886543    4799999987  444444

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=97.74  E-value=0.01  Score=58.93  Aligned_cols=174  Identities=8%  Similarity=-0.004  Sum_probs=92.3

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      .....+.++|||++++.....  ..+++.++.++.....+..................++||+.|+ ...    .++   
T Consensus        77 ~~~~~~~~~~dG~~lv~~~~~--~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv-~~~----~~~---  146 (276)
T 3no2_A           77 CEMQTARILPDGNALVAWCGH--PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLV-PLF----ATS---  146 (276)
T ss_dssp             CEEEEEEECTTSCEEEEEEST--TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEE-EET----TTT---
T ss_pred             ccccccEECCCCCEEEEecCC--CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEE-Eec----CCC---
Confidence            346678899999954443221  2348888875544443332211111111233567899999765 443    233   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecc
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDL  405 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~  405 (790)
                           .|+.+|.+ |+.     ...+..... ... ....++|+.++.. ..+    ..|+.++.++  ++. -.+...-
T Consensus       147 -----~v~~~d~~-G~~-----~w~~~~~~~-~~~-~~~~~~g~~~v~~-~~~----~~v~~~d~~t--G~~~w~~~~~~  206 (276)
T 3no2_A          147 -----EVREIAPN-GQL-----LNSVKLSGT-PFS-SAFLDNGDCLVAC-GDA----HCFVQLNLES--NRIVRRVNAND  206 (276)
T ss_dssp             -----EEEEECTT-SCE-----EEEEECSSC-CCE-EEECTTSCEEEEC-BTT----SEEEEECTTT--CCEEEEEEGGG
T ss_pred             -----EEEEECCC-CCE-----EEEEECCCC-ccc-eeEcCCCCEEEEe-CCC----CeEEEEeCcC--CcEEEEecCCC
Confidence                 68999988 551     333332211 122 3456888755443 332    3588888874  332 2222100


Q ss_pred             cccCC-CcccEEEEEEecCCcEEEEEeecC-------CCCeEEEEecCCCeEEEe
Q psy463          406 LTSAN-QKCSYSGATFSTNVSYYVLSCIGP-------GIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       406 ~~~~~-~~~~~~~~~~s~dg~~~~~~~~~~-------~~~~i~~~~~~~~~~~~l  452 (790)
                        ..+ .......+...++|..++..+.+.       +.+.++-++.+++-+..+
T Consensus       207 --~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~  259 (276)
T 3no2_A          207 --IEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQL  259 (276)
T ss_dssp             --SBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEE
T ss_pred             --CCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEe
Confidence              000 112345677889999887776553       345666666655444433

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=97.73  E-value=0.0046  Score=61.04  Aligned_cols=111  Identities=12%  Similarity=0.074  Sum_probs=62.3

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      ..+.++|||++ ++++..  ...|++++.+++.........    . .....+.+++|| .|++...    ..+      
T Consensus       153 ~~i~~~~~g~l-~v~~~~--~~~i~~~~~~~~~~~~~~~~~----~-~~p~~i~~d~~g-~l~v~~~----~~~------  213 (270)
T 1rwi_B          153 DGVAVDNSGNV-YVTDTD--NNRVVKLEAESNNQVVLPFTD----I-TAPWGIAVDEAG-TVYVTEH----NTN------  213 (270)
T ss_dssp             CCEEECTTCCE-EEEEGG--GTEEEEECTTTCCEEECCCSS----C-CSEEEEEECTTC-CEEEEET----TTS------
T ss_pred             eeEEEeCCCCE-EEEECC--CCEEEEEecCCCceEeecccC----C-CCceEEEECCCC-CEEEEEC----CCC------
Confidence            45788999983 333322  124899998876543221111    0 112367899999 4653332    222      


Q ss_pred             ccEEEEEEcCCCCcccCCCcccccCCC-eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLTRGR-FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                        .|++++.++..      ...+.... ..... +.+++||+ ||+.....    ..|.++++..
T Consensus       214 --~v~~~~~~~~~------~~~~~~~~~~~p~~-i~~~~~g~-l~v~~~~~----~~v~~~~~~~  264 (270)
T 1rwi_B          214 --QVVKLLAGSTT------STVLPFTGLNTPLA-VAVDSDRT-VYVADRGN----DRVVKLTSLE  264 (270)
T ss_dssp             --CEEEECTTCSC------CEECCCCSCSCEEE-EEECTTCC-EEEEEGGG----TEEEEECCCG
T ss_pred             --cEEEEcCCCCc------ceeeccCCCCCcee-EEECCCCC-EEEEECCC----CEEEEEcCCC
Confidence              58999987654      33332222 22333 78899996 77665543    3666666543

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=97.73  E-value=0.0017  Score=68.66  Aligned_cols=152  Identities=11%  Similarity=0.041  Sum_probs=73.4

Q ss_pred             CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEe--CCC------------------cccccCCceeE
Q psy463          246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRD--LDR------------------GWFEPFDHLRF  304 (790)
Q Consensus       246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~--~~~------------------~~~~~~~~~~~  304 (790)
                      ......+.|+|++. +++....+.   .|.+.|+.+++........  ...                  +.........|
T Consensus       186 ~~~v~~v~~~p~~~~~l~~~~~d~---~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~  262 (393)
T 4gq1_A          186 SSPGISVQFRPSNPNQLIVGERNG---NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRW  262 (393)
T ss_dssp             SSCEEEEEEETTEEEEEEEEETTS---EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEE
T ss_pred             CCCcEEEEECCCCCceEEecCCCC---EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeee
Confidence            44567899999987 555554433   3888888877543211100  000                  00011234566


Q ss_pred             c-cCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE------------------eEEEee
Q psy463          305 S-SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV------------------TEILAW  365 (790)
Q Consensus       305 s-pDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~------------------~~~~~~  365 (790)
                      + |||+.|+ ..+    .++        .+.++|+..++.     ...+......+                  .. ..|
T Consensus       263 ~~~dg~~l~-s~s----~d~--------~i~vwd~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  323 (393)
T 4gq1_A          263 IGSDGSGIL-AMC----KSG--------AWLRWNLFANND-----YNEISDSTMKLGPKNLLPNVQGISLFPSLLG-ACP  323 (393)
T ss_dssp             ETTTTCEEE-EEC----TTS--------EEEEEEC------------------------CCSCSEEEECSSCCSSC-CEE
T ss_pred             ecCCCCEEE-EEe----CCC--------CEEEEECccCCC-----CceEeeecCccccEEEccccccccccCccee-EEE
Confidence            4 8999887 555    344        577778765541     11111110000                  01 123


Q ss_pred             ec-CCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          366 DE-KENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       366 s~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      +| .++.++..+...    ..|+..++..  ++.......      ....+..++|||||++|+...
T Consensus       324 ~~~~~~~~~~sgs~D----g~V~lwd~~~--~~~~~~~~~------~~~~V~svafspdG~~LA~as  378 (393)
T 4gq1_A          324 HPRYMDYFATAHSQH----GLIQLINTYE--KDSNSIPIQ------LGMPIVDFCWHQDGSHLAIAT  378 (393)
T ss_dssp             CSSCTTEEEEEETTT----TEEEEEETTC--TTCCEEEEE------CSSCEEEEEECTTSSEEEEEE
T ss_pred             ccCCCCEEEEEECCC----CEEEEEECCC--CcEEEEecC------CCCcEEEEEEcCCCCEEEEEe
Confidence            33 344444443332    3566667665  332221111      345788899999999997764

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=97.71  E-value=0.0023  Score=66.18  Aligned_cols=77  Identities=6%  Similarity=0.026  Sum_probs=48.2

Q ss_pred             EeeecCCCEEEEEEc-C-CC--CceEEEEEEEcCCCCCC-cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCC
Q psy463          363 LAWDEKENNVYFLST-Q-GS--PIVQHMYRINIADPTAT-PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIP  437 (790)
Q Consensus       363 ~~~s~dg~~l~~~~~-~-~~--~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~  437 (790)
                      ..++||++++|+... . +.  -....+.++|+++  .+ ...|.-       + ..-..+.++|||++++++.... ..
T Consensus       269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t--~~vv~~i~v-------g-~~p~gi~~s~Dg~~l~va~~~~-~~  337 (368)
T 1mda_H          269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV--GQTSGPISN-------G-HDSDAIIAAQDGASDNYANSAG-TE  337 (368)
T ss_dssp             EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS--CCEEECCEE-------E-EEECEEEECCSSSCEEEEEETT-TT
T ss_pred             eEEcCCCCEEEEEeccccCcccccCCCEEEEECCC--CeEEEEEEC-------C-CCcceEEECCCCCEEEEEccCC-CC
Confidence            458999999988754 2 20  0013445888876  33 223322       1 2456689999999887776521 35


Q ss_pred             eEEEEecCCCeEE
Q psy463          438 EIMLFDKTGQRLL  450 (790)
Q Consensus       438 ~i~~~~~~~~~~~  450 (790)
                      .|.++|+++.+..
T Consensus       338 ~VsVID~~t~kvv  350 (368)
T 1mda_H          338 VLDIYDAASDQDQ  350 (368)
T ss_dssp             EEEEEESSSCEEE
T ss_pred             eEEEEECCCCcEE
Confidence            7999999886544

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=97.71  E-value=0.0023  Score=68.61  Aligned_cols=158  Identities=10%  Similarity=0.079  Sum_probs=88.5

Q ss_pred             EccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEE
Q psy463          254 WANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHL  333 (790)
Q Consensus       254 wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l  333 (790)
                      ++|||++++....+.   .|.++|+.++++...........   ......|+|||+.|+ +.+    .+|        .|
T Consensus       178 ~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~-s~~----~dg--------~i  238 (437)
T 3gre_A          178 VNEEKSLLVALTNLS---RVIIFDIRTLERLQIIENSPRHG---AVSSICIDEECCVLI-LGT----TRG--------II  238 (437)
T ss_dssp             ECSSCEEEEEEETTS---EEEEEETTTCCEEEEEECCGGGC---CEEEEEECTTSCEEE-EEE----TTS--------CE
T ss_pred             EcCCCCEEEEEeCCC---eEEEEeCCCCeeeEEEccCCCCC---ceEEEEECCCCCEEE-EEc----CCC--------eE
Confidence            778888555554432   39999999887755554310111   245789999999887 555    456        58


Q ss_pred             EEEEcCCCCcccCCCccccc-CCCeEEeEEE----eeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeec---
Q psy463          334 TFIDLDDQAGIKDKVPVPLT-RGRFTVTEIL----AWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCD---  404 (790)
Q Consensus       334 ~~~d~~~~~~~~~~~~~~lt-~~~~~~~~~~----~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~---  404 (790)
                      .++|+..++     ....+. .+...+.. +    .|++|++.|+..+.+     ..|...++..  ++. ..+...   
T Consensus       239 ~iwd~~~~~-----~~~~~~~~~~~~v~~-~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~--~~~~~~~~~~~~~  305 (437)
T 3gre_A          239 DIWDIRFNV-----LIRSWSFGDHAPITH-VEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVK--GHCQYAFINSDEQ  305 (437)
T ss_dssp             EEEETTTTE-----EEEEEBCTTCEEEEE-EEECTTTCTTEEEEEEESTT-----EEEEEEETTT--TEEEEEEESSSSC
T ss_pred             EEEEcCCcc-----EEEEEecCCCCceEE-EEeccccCCCccEEEEEcCC-----CcEEEEEcCC--CcEEEEEEcCCCC
Confidence            899998776     133333 33334443 5    455666655444333     5666667654  221 111100   


Q ss_pred             -----cc---------ccCC--CcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          405 -----LL---------TSAN--QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       405 -----~~---------~~~~--~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                           ..         ...+  ....+..+.|+ ++++++....   -..|.++++.++
T Consensus       306 ~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~---d~~i~~wd~~~~  360 (437)
T 3gre_A          306 PSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEA---TSSIVMFSLNEL  360 (437)
T ss_dssp             CCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGG---GTEEEEEETTCG
T ss_pred             CccceecccccccccceecccccCCceEEEEEC-CceEEEecCC---CCeEEEEECCCc
Confidence                 00         0000  22345667888 6766644322   346888888764

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=97.70  E-value=0.003  Score=65.44  Aligned_cols=244  Identities=11%  Similarity=0.125  Sum_probs=122.1

Q ss_pred             cccccC---CceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEec
Q psy463          114 LRFSSD---GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSH  190 (790)
Q Consensus       114 ~~~spd---g~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~  190 (790)
                      ..|+||   |+.|+. ...++            .|.++++.+...   .....+......+. -+.|+++++  .++...
T Consensus        45 ~~~~~~~~~g~~l~~-~~~dg------------~i~iw~~~~~~~---~~~~~~~~h~~~v~-~~~~~~~~~--~l~s~~  105 (368)
T 3mmy_A           45 LSFSPPTLPGNFLIA-GSWAN------------DVRCWEVQDSGQ---TIPKAQQMHTGPVL-DVCWSDDGS--KVFTAS  105 (368)
T ss_dssp             EEECCTTSSSEEEEE-EETTS------------EEEEEEECTTSC---EEEEEEEECSSCEE-EEEECTTSS--EEEEEE
T ss_pred             EEEcCCCCCceEEEE-ECCCC------------cEEEEEcCCCCc---eeEEEeccccCCEE-EEEECcCCC--EEEEEc
Confidence            478999   466554 33222            688888776210   11133333333333 346666554  333222


Q ss_pred             ccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEE--ccCCcEEEEEeccC
Q psy463          191 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNW--ANESVVAAWVNRVQ  268 (790)
Q Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~w--spDg~~~~~~~r~~  268 (790)
                                 ....|.+.++.+++.      ..+.                 .....+..+.|  +|||++++....+.
T Consensus       106 -----------~dg~v~iwd~~~~~~------~~~~-----------------~~~~~v~~~~~~~~~~~~~l~~~~~dg  151 (368)
T 3mmy_A          106 -----------CDKTAKMWDLSSNQA------IQIA-----------------QHDAPVKTIHWIKAPNYSCVMTGSWDK  151 (368)
T ss_dssp             -----------TTSEEEEEETTTTEE------EEEE-----------------ECSSCEEEEEEEECSSCEEEEEEETTS
T ss_pred             -----------CCCcEEEEEcCCCCc------eeec-----------------cccCceEEEEEEeCCCCCEEEEccCCC
Confidence                       125788889887652      2222                 34556788999  89999655554432


Q ss_pred             cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCC
Q psy463          269 NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV  348 (790)
Q Consensus       269 ~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~  348 (790)
                         .|.++|+.++++........        ....+.+.+..++ +..    .++        .+.++++.....    .
T Consensus       152 ---~i~vwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~----~~~--------~i~~~~~~~~~~----~  203 (368)
T 3mmy_A          152 ---TLKFWDTRSSNPMMVLQLPE--------RCYCADVIYPMAV-VAT----AER--------GLIVYQLENQPS----E  203 (368)
T ss_dssp             ---EEEEECSSCSSCSEEEECSS--------CEEEEEEETTEEE-EEE----GGG--------CEEEEECSSSCE----E
T ss_pred             ---cEEEEECCCCcEEEEEecCC--------CceEEEecCCeeE-EEe----CCC--------cEEEEEeccccc----h
Confidence               39999998887665554321        1233334444555 333    233        477777765430    0


Q ss_pred             cccccCC-CeEEeEEEeeecCCCE----EEEEEcCCCCceEEEEEEEcCCCCCCc-ce---eeeccc-----ccCCCccc
Q psy463          349 PVPLTRG-RFTVTEILAWDEKENN----VYFLSTQGSPIVQHMYRINIADPTATP-EC---ITCDLL-----TSANQKCS  414 (790)
Q Consensus       349 ~~~lt~~-~~~~~~~~~~s~dg~~----l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~---lt~~~~-----~~~~~~~~  414 (790)
                      ...+... ..... ...+.++...    ++..+.+     ..+...++..  ... ..   +.....     ........
T Consensus       204 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d-----g~i~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (368)
T 3mmy_A          204 FRRIESPLKHQHR-CVAIFKDKQNKPTGFALGSIE-----GRVAIHYINP--PNPAKDNFTFKCHRSNGTNTSAPQDIYA  275 (368)
T ss_dssp             EEECCCSCSSCEE-EEEEEECTTSCEEEEEEEETT-----SEEEEEESSC--SCHHHHSEEEECSEEC----CCCEEECC
T ss_pred             hhhccccccCCCc-eEEEcccCCCCCCeEEEecCC-----CcEEEEecCC--CCccccceeeeeeecccccccccccccc
Confidence            1111111 11111 1233333221    4444444     3444555544  211 11   111000     00000114


Q ss_pred             EEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          415 YSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       415 ~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      +..+.|+||+++++.....   ..|.++|+.+++.
T Consensus       276 v~~~~~sp~~~~l~s~~~d---g~i~iwd~~~~~~  307 (368)
T 3mmy_A          276 VNGIAFHPVHGTLATVGSD---GRFSFWDKDARTK  307 (368)
T ss_dssp             EEEEEECTTTCCEEEEETT---SCEEEEETTTTEE
T ss_pred             eEEEEEecCCCEEEEEccC---CeEEEEECCCCcE
Confidence            7789999999988665432   4588888876543

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=97.69  E-value=0.00053  Score=73.49  Aligned_cols=173  Identities=8%  Similarity=0.111  Sum_probs=95.8

Q ss_pred             CEEEEEEEccCCcEEEEEe-ccCcceEEEEEECCCC-----ce-eEEEEEeCCCcccccCCceeEccC-CCEEEEEEccc
Q psy463          247 PVLSRVNWANESVVAAWVN-RVQNRARITRCSINEG-----TC-DVVFSRDLDRGWFEPFDHLRFSSD-GKKMLLILSHN  318 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~-r~~~~~~i~~~~~~~g-----~~-~~l~~~~~~~~~~~~~~~~~~spD-g~~i~~~~~~~  318 (790)
                      ..+..++|||||++++... .+.....|.++|+.++     .. +.+.......+.........|+|+ ++.|+ +++  
T Consensus        93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~la-s~s--  169 (434)
T 2oit_A           93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVA-VCL--  169 (434)
T ss_dssp             SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEE-EEE--
T ss_pred             CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEE-EEE--
Confidence            4577899999999655421 1223334777877654     11 111111100111122457899998 55555 565  


Q ss_pred             cccCCCCCcCcccEEEEEEcCCCCcccCCCcc-cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463          319 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV-PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT  397 (790)
Q Consensus       319 ~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~-~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~  397 (790)
                        .+|        .|.++|+.++.      .. ........+.. ++|+|||+.|+..+.++     .|...++.+  ..
T Consensus       170 --~Dg--------~v~iwD~~~~~------~~~~~~~~~~~v~~-v~wspdg~~lasgs~dg-----~v~iwd~~~--~~  225 (434)
T 2oit_A          170 --ADG--------SIAVLQVTETV------KVCATLPSTVAVTS-VCWSPKGKQLAVGKQNG-----TVVQYLPTL--QE  225 (434)
T ss_dssp             --TTS--------CEEEEEESSSE------EEEEEECGGGCEEE-EEECTTSSCEEEEETTS-----CEEEECTTC--CE
T ss_pred             --CCC--------eEEEEEcCCCc------ceeeccCCCCceeE-EEEcCCCCEEEEEcCCC-----cEEEEccCC--cc
Confidence              456        58889987764      22 11112223444 89999999888777663     455555543  12


Q ss_pred             cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC----CCeEEEEecCC
Q psy463          398 PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG----IPEIMLFDKTG  446 (790)
Q Consensus       398 ~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~----~~~i~~~~~~~  446 (790)
                      ...+.........+...+..+.|++++.+++....+.+    .+.++++++..
T Consensus       226 ~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~  278 (434)
T 2oit_A          226 KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK  278 (434)
T ss_dssp             EEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred             cccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence            22222110000011236778899999888766655542    56788887754

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=97.68  E-value=0.0043  Score=62.63  Aligned_cols=118  Identities=9%  Similarity=0.030  Sum_probs=61.6

Q ss_pred             EEEEEEccCCcEE-EEEe--------ccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463          249 LSRVNWANESVVA-AWVN--------RVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ  319 (790)
Q Consensus       249 ~~~~~wspDg~~~-~~~~--------r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~  319 (790)
                      ....++||||+.+ ....        .+.....|.+.+..+|++..+.......+-.  ......+.+|..++ ..+   
T Consensus       229 v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~--~~~lsg~~sg~~lA-SgS---  302 (356)
T 2w18_A          229 VCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQA--GRFLEGDVKDHCAA-AIL---  302 (356)
T ss_dssp             CEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCC--CCEEEEEEETTEEE-EEE---
T ss_pred             eEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCc--ceeEccccCCCEEE-EEc---
Confidence            3456789999843 3221        1122345777788888765433211000000  00111122244444 444   


Q ss_pred             ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463          320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~  389 (790)
                       .++        .|.++|+.+++     ....|+.+...+...++|+|||++|+-.+.++.   .+||.+
T Consensus       303 -~Dg--------TIkIWDl~tGk-----~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~T---IklWd~  355 (356)
T 2w18_A          303 -TSG--------TIAIWDLLLGQ-----CTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGN---IFVYHY  355 (356)
T ss_dssp             -TTS--------CEEEEETTTCS-----EEEEECCC--CCCCEEEECSSSSEEEEECTTSC---EEEEEE
T ss_pred             -CCC--------cEEEEECCCCc-----EEEEecCCCCCeEEEEEECCCCCEEEEEECCCc---EEEecC
Confidence             345        58899999887     244565444333333789999998876665544   666643

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=97.68  E-value=0.011  Score=58.96  Aligned_cols=156  Identities=6%  Similarity=0.004  Sum_probs=83.0

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ....++++|||++++. +..  ...|++++.++.....+ ....   -......+.++|||+ |++...    .+     
T Consensus       122 ~~~~i~~~~~g~l~v~-~~~--~~~i~~~~~~g~~~~~~-~~~~---~~~~p~~i~~~~~g~-l~v~~~----~~-----  184 (286)
T 1q7f_A          122 HPRGVTVDNKGRIIVV-ECK--VMRVIIFDQNGNVLHKF-GCSK---HLEFPNGVVVNDKQE-IFISDN----RA-----  184 (286)
T ss_dssp             CEEEEEECTTSCEEEE-ETT--TTEEEEECTTSCEEEEE-ECTT---TCSSEEEEEECSSSE-EEEEEG----GG-----
T ss_pred             CceEEEEeCCCCEEEE-ECC--CCEEEEEcCCCCEEEEe-CCCC---ccCCcEEEEECCCCC-EEEEEC----CC-----
Confidence            4567889999983332 221  12488888654433322 2111   111134688999997 553333    22     


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccC-CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTR-GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL  406 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~  406 (790)
                         ..|++++.++..      ...+.. +.......++++++|+ |++......   ..|.+++.++  .....+...  
T Consensus       185 ---~~i~~~~~~g~~------~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~---~~i~~~~~~g--~~~~~~~~~--  247 (286)
T 1q7f_A          185 ---HCVKVFNYEGQY------LRQIGGEGITNYPIGVGINSNGE-ILIADNHNN---FNLTIFTQDG--QLISALESK--  247 (286)
T ss_dssp             ---TEEEEEETTCCE------EEEESCTTTSCSEEEEEECTTCC-EEEEECSSS---CEEEEECTTS--CEEEEEEES--
T ss_pred             ---CEEEEEcCCCCE------EEEEccCCccCCCcEEEECCCCC-EEEEeCCCC---EEEEEECCCC--CEEEEEccc--
Confidence               368999976543      333432 2111122378899986 666554321   2677777654  233333321  


Q ss_pred             ccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          407 TSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       407 ~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                         ........+.++|||+.+ ++ +.  ...|.+++.
T Consensus       248 ---~~~~~~~~i~~~~~g~l~-vs-~~--~~~v~v~~~  278 (286)
T 1q7f_A          248 ---VKHAQCFDVALMDDGSVV-LA-SK--DYRLYIYRY  278 (286)
T ss_dssp             ---SCCSCEEEEEEETTTEEE-EE-ET--TTEEEEEEC
T ss_pred             ---CCCCcceeEEECCCCcEE-EE-CC--CCeEEEEEc
Confidence               012235578899999744 33 22  245666654

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.68  E-value=0.0048  Score=70.63  Aligned_cols=168  Identities=13%  Similarity=0.072  Sum_probs=104.8

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCC----ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEG----TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g----~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      .....+.|.+.+..++|++...+  .|+++++++.    ..+.+.....     .....+++.+.++.||++-.      
T Consensus       424 ~~~~gl~~d~~~~~lY~sD~~~~--~I~~~~l~g~~~~~~~~~vi~~~l-----~~P~GLAvD~~~~~LY~tD~------  490 (791)
T 3m0c_C          424 RNVVALDTEVASNRIYWSDLSQR--MICSTQLDRAHGVSSYDTVISRDI-----QAPDGLAVDWIHSNIYWTDS------  490 (791)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTT--EEEEEEC--------CEEEECSSC-----SCCCEEEEETTTTEEEEEET------
T ss_pred             CceEEEeecccCCeeEEeeccce--eEEEEeccCCCCCcceeEEEecCC-----CCcceeeeeecCCcEEEEec------
Confidence            34567888887778888876543  4888888763    2333332111     11347888889988885433      


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                      +      ...|++++++++.      .+.|..........++++|.++.||++.....   ..|+++++++  ...+.+.
T Consensus       491 ~------~~~I~v~~ldG~~------~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~---~~I~~~~~dG--~~~~~lv  553 (791)
T 3m0c_C          491 V------LGTVSVADTKGVK------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP---AKIKKGGLNG--VDIYSLV  553 (791)
T ss_dssp             T------TTEEEEEETTSSS------EEEEEECTTCCEEEEEEETTTTEEEEEECSSS---CEEEEEETTS--CCEEEEE
T ss_pred             C------CCeEEEEeCCCCe------EEEEEeCCCCCcceEEEecCCCCEEEecCCCC---CeEEEEecCC--CceEEEE
Confidence            2      3479999998765      44443322222223788999888988865432   4799999987  3433333


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                      ..      +...-..+++++.+..|+++-  .....|+++++++...+.+
T Consensus       554 ~~------~l~~P~GLavD~~~~~LYwaD--~~~~~I~~~d~dG~~~~~v  595 (791)
T 3m0c_C          554 TE------NIQWPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTI  595 (791)
T ss_dssp             CS------SCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEE
T ss_pred             eC------CCCCceEEEEecCCCeEEEEe--CCCCcEEEEecCCCceEEE
Confidence            21      223456788998888887663  2356899999988544443

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.66  E-value=0.0045  Score=63.42  Aligned_cols=170  Identities=9%  Similarity=0.103  Sum_probs=89.3

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .....+..+.|+||  +++....+.   .|.++++.++..+.+..... .+........+|+|||+.|+ +.+    .++
T Consensus        12 ~h~~~v~~~~~s~~--~las~~~D~---~i~lw~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~la-s~s----~D~   80 (330)
T 2hes_X           12 LYKEKIWSFDFSQG--ILATGSTDR---KIKLVSVKYDDFTLIDVLDE-TAHKKAIRSVAWRPHTSLLA-AGS----FDS   80 (330)
T ss_dssp             CCSSCEEEEEEETT--EEEEEESSS---CEEEEECSSSCCEEEEEECT-TCCCSCEEEEEECTTSSEEE-EEE----TTS
T ss_pred             cCCCceeeeccCCC--EEEEEcCCC---EEEEEEecCCCeEEEEEEec-CCccCCEEEEEECCCCCEEE-EEe----CCC
Confidence            33455778899998  444443322   27788887764333222111 10111244789999999877 565    455


Q ss_pred             CCCcCcccEEEEEEcCCCCc-ccCC-CcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463          324 STPVDSWDHLTFIDLDDQAG-IKDK-VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI  401 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~-~~~~-~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  401 (790)
                              .|.++++..+.. .... ....+..+...+.. ++|+|||+.|+-.+.++.   ..||.+...+  ...+++
T Consensus        81 --------~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~-v~~sp~g~~las~s~D~~---v~iwd~~~~~--~~~~~~  146 (330)
T 2hes_X           81 --------TVSIWAKEESADRTFEMDLLAIIEGHENEVKG-VAWSNDGYYLATCSRDKS---VWIWETDESG--EEYECI  146 (330)
T ss_dssp             --------CEEEEEC-------CCCEEEEEEC----CEEE-EEECTTSCEEEEEETTSC---EEEEECCTTC--CCCEEE
T ss_pred             --------cEEEEEcccCcCccccceeEEEEcCCCCcEEE-EEECCCCCEEEEEeCCCE---EEEEeccCCC--CCeEEE
Confidence                    467777643210 0000 01223334444544 899999998877766643   4555442221  222333


Q ss_pred             eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      ..    +.+....+..+.|+|++++++......   .|.+++..
T Consensus       147 ~~----~~~h~~~v~~v~~~p~~~~l~s~s~D~---~i~iW~~~  183 (330)
T 2hes_X          147 SV----LQEHSQDVKHVIWHPSEALLASSSYDD---TVRIWKDY  183 (330)
T ss_dssp             EE----ECCCSSCEEEEEECSSSSEEEEEETTS---CEEEEEEE
T ss_pred             EE----eccCCCceEEEEECCCCCEEEEEcCCC---eEEEEECC
Confidence            21    112455788899999999876543322   35555543

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=97.62  E-value=0.012  Score=59.45  Aligned_cols=119  Identities=8%  Similarity=0.106  Sum_probs=66.3

Q ss_pred             EEEEEEc----cCCcEEEEEeccCcceEEEEEECC-CCceeE--EEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463          249 LSRVNWA----NESVVAAWVNRVQNRARITRCSIN-EGTCDV--VFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       249 ~~~~~ws----pDg~~~~~~~r~~~~~~i~~~~~~-~g~~~~--l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                      ...+.|+    |||+.+++.....  ..|++++.+ ++....  +...-. ...........+++||+ |++...    .
T Consensus       174 ~~~i~~~~~~d~dg~~l~v~~~~~--~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~i~~d~~G~-l~v~~~----~  245 (314)
T 1pjx_A          174 PNGIAVRHMNDGRPYQLIVAETPT--KKLWSYDIKGPAKIENKKVWGHIP-GTHEGGADGMDFDEDNN-LLVANW----G  245 (314)
T ss_dssp             EEEEEEEECTTSCEEEEEEEETTT--TEEEEEEEEETTEEEEEEEEEECC-CCSSCEEEEEEEBTTCC-EEEEEE----T
T ss_pred             cceEEEecccCCCCCEEEEEECCC--CeEEEEECCCCCccccceEEEECC-CCCCCCCCceEECCCCC-EEEEEc----C
Confidence            3567899    9998655554332  237777765 454321  221111 00001123578899996 442332    1


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      .        ..|++++.++++     ....+......+.. +++++||+.||+.....    ..|++++++.
T Consensus       246 ~--------~~i~~~d~~~g~-----~~~~~~~~~~~~~~-i~~~~dg~~l~v~~~~~----~~l~~~~~~~  299 (314)
T 1pjx_A          246 S--------SHIEVFGPDGGQ-----PKMRIRCPFEKPSN-LHFKPQTKTIFVTEHEN----NAVWKFEWQR  299 (314)
T ss_dssp             T--------TEEEEECTTCBS-----CSEEEECSSSCEEE-EEECTTSSEEEEEETTT----TEEEEEECSS
T ss_pred             C--------CEEEEEcCCCCc-----EeEEEeCCCCCcee-EEECCCCCEEEEEeCCC----CeEEEEeCCC
Confidence            2        369999987555     12333322222333 67899999888876553    3688888754

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=97.55  E-value=0.029  Score=57.22  Aligned_cols=167  Identities=10%  Similarity=0.015  Sum_probs=82.6

Q ss_pred             EEEEEEEcc-CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC-----cccccCCceeEccCCCEEEEEEcccccc
Q psy463          248 VLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR-----GWFEPFDHLRFSSDGKKMLLILSHNQES  321 (790)
Q Consensus       248 ~~~~~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~-----~~~~~~~~~~~spDg~~i~~~~~~~~~~  321 (790)
                      .-..++++| +|+++......  ...|.+++.+ |.........+..     +-+......+++||+..|++...     
T Consensus       144 ~P~~ia~~~~~g~lyv~d~~~--~~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~-----  215 (329)
T 3fvz_A          144 QPTDVAVEPSTGAVFVSDGYC--NSRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR-----  215 (329)
T ss_dssp             SEEEEEECTTTCCEEEEECSS--CCEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET-----
T ss_pred             CCcEEEEeCCCCeEEEEeCCC--CCeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC-----
Confidence            456789999 67743332211  2348888854 4433333222111     11111346889999666774333     


Q ss_pred             CCCCCcCcccEEEEEEcCCCCcccCCCcccccCC--CeEEeEEEeeecCCCEEEEEEcC---CCCceEEEEEEEcCCCCC
Q psy463          322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG--RFTVTEILAWDEKENNVYFLSTQ---GSPIVQHMYRINIADPTA  396 (790)
Q Consensus       322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~--~~~~~~~~~~s~dg~~l~~~~~~---~~~~~~~l~~~~~~~~~~  396 (790)
                       +      ...|.+++.++|+.     ...+...  ...... +.++| + .++.....   .......+++++..+  +
T Consensus       216 -~------~~~I~~~~~~~G~~-----~~~~~~~~~~~~~~~-~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~--g  278 (329)
T 3fvz_A          216 -E------NGRIQCFKTDTKEF-----VREIKHASFGRNVFA-ISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSS--G  278 (329)
T ss_dssp             -T------TTEEEEEETTTCCE-----EEEECCTTTTTCEEE-EEEET-T-EEEEEECCCCTTCSCCCCEEEEETTT--C
T ss_pred             -C------CCEEEEEECCCCcE-----EEEEeccccCCCcce-eeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCC--C
Confidence             2      34799999886651     3333211  112222 66778 3 33333222   112235778888765  4


Q ss_pred             CcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          397 TPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       397 ~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      +......   ...........++++||| .++++..+  ...|.+++++
T Consensus       279 ~~~~~~~---~~~~~~~~p~~ia~~~dG-~lyvad~~--~~~I~~~~~~  321 (329)
T 3fvz_A          279 EIIDVFK---PVRKHFDMPHDIVASEDG-TVYIGDAH--TNTVWKFTLT  321 (329)
T ss_dssp             CEEEEEC---CSSSCCSSEEEEEECTTS-EEEEEESS--SCCEEEEEEE
T ss_pred             eEEEEEc---CCCCccCCeeEEEECCCC-CEEEEECC--CCEEEEEeCC
Confidence            3222110   000123345678899999 44443322  2356666554

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=97.55  E-value=0.0026  Score=65.77  Aligned_cols=74  Identities=12%  Similarity=0.030  Sum_probs=46.5

Q ss_pred             EEEccCCcEEEEEec-c-Cc----ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          252 VNWANESVVAAWVNR-V-QN----RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       252 ~~wspDg~~~~~~~r-~-~~----~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      +.++|||+.++.... . ..    ...+.++|+++++...-..... .     ...+.|+|||+.+++...   ..++  
T Consensus       269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~-----p~gi~~s~Dg~~l~va~~---~~~~--  337 (368)
T 1mda_H          269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-D-----SDAIIAAQDGASDNYANS---AGTE--  337 (368)
T ss_dssp             EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-E-----ECEEEECCSSSCEEEEEE---TTTT--
T ss_pred             eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-C-----cceEEECCCCCEEEEEcc---CCCC--
Confidence            579999996665432 1 10    1225599999886533221111 1     347999999998874432   0233  


Q ss_pred             CcCcccEEEEEEcCCCC
Q psy463          326 PVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~  342 (790)
                            .|.++|+.+++
T Consensus       338 ------~VsVID~~t~k  348 (368)
T 1mda_H          338 ------VLDIYDAASDQ  348 (368)
T ss_dssp             ------EEEEEESSSCE
T ss_pred             ------eEEEEECCCCc
Confidence                  79999998887

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.54  E-value=0.019  Score=64.17  Aligned_cols=161  Identities=16%  Similarity=0.145  Sum_probs=105.9

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ....+.|.+++..++|++...  ..|++++++++..+.+.....     ......++.+.++.||+.-.      +    
T Consensus        38 ~~~~l~~d~~~~~lywtD~~~--~~I~r~~~~g~~~~~v~~~g~-----~~P~GlAvD~~~~~LY~tD~------~----  100 (628)
T 4a0p_A           38 EASALDFDVTDNRIYWTDISL--KTISRAFMNGSALEHVVEFGL-----DYPEGMAVDWLGKNLYWADT------G----  100 (628)
T ss_dssp             CEEEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECSSC-----SCCCEEEEETTTTEEEEEET------T----
T ss_pred             ceEEEEEECCCCEEEEEECCC--CeEEEEECCCCCcEEEEeCCC-----CCcceEEEEeCCCEEEEEEC------C----
Confidence            356789999888888887643  359999998876665553221     11346788888888885432      2    


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLT  407 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~  407 (790)
                        ...|.+++++++.      .+.|..........++.+|....||++.....   ..|+++++++  ...+.+..    
T Consensus       101 --~~~I~v~~~dG~~------~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~---~~I~r~~~dG--~~~~~l~~----  163 (628)
T 4a0p_A          101 --TNRIEVSKLDGQH------RQVLVWKDLDSPRALALDPAEGFMYWTEWGGK---PKIDRAAMDG--SERTTLVP----  163 (628)
T ss_dssp             --TTEEEEEETTSTT------CEEEECSSCCCEEEEEEETTTTEEEEEECSSS---CEEEEEETTS--CSCEEEEC----
T ss_pred             --CCEEEEEecCCCc------EEEEEeCCCCCcccEEEccCCCeEEEeCCCCC---CEEEEEeCCC--CceEEEEC----
Confidence              3479999998765      44443222222233788998888988764323   5899999987  44554443    


Q ss_pred             cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          408 SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                         +...-..++++++++.|+++...  ...|+.+++++.
T Consensus       164 ---~~~~P~GlalD~~~~~LY~aD~~--~~~I~~~d~dG~  198 (628)
T 4a0p_A          164 ---NVGRANGLTIDYAKRRLYWTDLD--TNLIESSNMLGL  198 (628)
T ss_dssp             ---SCSSEEEEEEETTTTEEEEEETT--TTEEEEEETTSC
T ss_pred             ---CCCCcceEEEccccCEEEEEECC--CCEEEEEcCCCC
Confidence               23345678899988877665432  356778887764

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.52  E-value=0.19  Score=56.02  Aligned_cols=115  Identities=17%  Similarity=0.156  Sum_probs=73.1

Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  330 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~  330 (790)
                      .++..+.++.++|++...  ..|.++++++...+.|.....     .....+++.|....||++-.      |.     .
T Consensus       396 GlAvD~~~~~lY~tD~~~--~~I~v~~~~G~~~~~l~~~~l-----~~P~~iavdp~~G~ly~tD~------g~-----~  457 (619)
T 3s94_A          396 GIAVDWVARNLYWTDTGT--DRIEVTRLNGTMRKILISEDL-----EEPRAIVLDPMVGYMYWTDW------GE-----I  457 (619)
T ss_dssp             EEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECTTC-----CSEEEEEEETTTTEEEEEEC------SS-----S
T ss_pred             ceEEecccCcEEEEeCCC--CcEEEEeCCCCeEEEEEECCC-----CCeeeEEEEcCCCcEEEecC------CC-----C
Confidence            445556677777776543  358899998776665553211     11336788887666775432      20     2


Q ss_pred             cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ..|++.++++..      .+.|..........++.+++++.||+.-...    ..|+++++++
T Consensus       458 ~~I~r~~~dG~~------~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~----~~I~~~~~dG  510 (619)
T 3s94_A          458 PKIERAALDGSD------RVVLVNTSLGWPNGLALDYDEGKIYWGDAKT----DKIEVMNTDG  510 (619)
T ss_dssp             CEEEEEETTSCS------CEEEECSSCSCEEEEEEETTTTEEEEEETTT----TEEEEEESSS
T ss_pred             CEEEEEccCCCc------cEEEEeCCCCCCeeeEEcccCCEEEEEECCC----CEEEEEecCC
Confidence            479999998765      4444433222222378999899999886653    4799999987

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.49  E-value=0.068  Score=59.68  Aligned_cols=222  Identities=14%  Similarity=0.075  Sum_probs=125.7

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|.++++++..     ....+.-....-..-++||+.++  .+|.+...          ...|++++++++..+.+    
T Consensus        16 ~I~~i~l~~~~-----~~~~~~~~~~~~~~~l~~d~~~~--~lywtD~~----------~~~I~r~~~~g~~~~~v----   74 (628)
T 4a0p_A           16 DIRRISLETNN-----NNVAIPLTGVKEASALDFDVTDN--RIYWTDIS----------LKTISRAFMNGSALEHV----   74 (628)
T ss_dssp             EEEEEESSCTT-----CEEECCCCSCSCEEEEEEETTTT--EEEEEETT----------TTEEEEEETTSCSCEEE----
T ss_pred             cEEEEECCCCC-----cceEEEcCCCCceEEEEEECCCC--EEEEEECC----------CCeEEEEECCCCCcEEE----
Confidence            79999998653     11111111111122346777665  45555431          26899999887642211    


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR  303 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  303 (790)
                       +.                 .....-..++..+.++.++|++...  .+|.++++++...+.|......     ....++
T Consensus        75 -~~-----------------~g~~~P~GlAvD~~~~~LY~tD~~~--~~I~v~~~dG~~~~~l~~~~l~-----~P~~ia  129 (628)
T 4a0p_A           75 -VE-----------------FGLDYPEGMAVDWLGKNLYWADTGT--NRIEVSKLDGQHRQVLVWKDLD-----SPRALA  129 (628)
T ss_dssp             -EC-----------------SSCSCCCEEEEETTTTEEEEEETTT--TEEEEEETTSTTCEEEECSSCC-----CEEEEE
T ss_pred             -Ee-----------------CCCCCcceEEEEeCCCEEEEEECCC--CEEEEEecCCCcEEEEEeCCCC-----CcccEE
Confidence             11                 1111122455666777778877643  3599999988766666532211     123678


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      +.|....||++-     ...      ...|+++++++..      .+.|..+.....+ ++++++++.||+.-...    
T Consensus       130 vdp~~G~lY~tD-----~g~------~~~I~r~~~dG~~------~~~l~~~~~~P~G-lalD~~~~~LY~aD~~~----  187 (628)
T 4a0p_A          130 LDPAEGFMYWTE-----WGG------KPKIDRAAMDGSE------RTTLVPNVGRANG-LTIDYAKRRLYWTDLDT----  187 (628)
T ss_dssp             EETTTTEEEEEE-----CSS------SCEEEEEETTSCS------CEEEECSCSSEEE-EEEETTTTEEEEEETTT----
T ss_pred             EccCCCeEEEeC-----CCC------CCEEEEEeCCCCc------eEEEECCCCCcce-EEEccccCEEEEEECCC----
Confidence            898766777533     221      3489999998876      5444433222233 78999999998887653    


Q ss_pred             EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          384 QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      ..|+++++++  ...+.+...       ...-..+++..  ..++++.  .....|++++..+
T Consensus       188 ~~I~~~d~dG--~~~~v~~~~-------l~~P~glav~~--~~ly~tD--~~~~~I~~~dk~t  237 (628)
T 4a0p_A          188 NLIESSNMLG--LNREVIADD-------LPHPFGLTQYQ--DYIYWTD--WSRRSIERANKTS  237 (628)
T ss_dssp             TEEEEEETTS--CSCEEEEEC-------CSCEEEEEEET--TEEEEEE--TTTTEEEEEETTT
T ss_pred             CEEEEEcCCC--CceEEeecc-------CCCceEEEEEC--CEEEEec--CCCCEEEEEECCC
Confidence            4799999987  333333321       12233444443  4554442  2345778887543

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=97.45  E-value=0.013  Score=57.23  Aligned_cols=183  Identities=13%  Similarity=-0.037  Sum_probs=101.4

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      +.|.++|+++++..+.   ..+-                 .....   ...+++|+.++..+..+  ..++++|.++.+.
T Consensus        44 s~v~~iD~~tg~v~~~---i~l~-----------------~~~fg---eGi~~~g~~lyv~t~~~--~~v~viD~~t~~v   98 (266)
T 2iwa_A           44 SSVRQVALQTGKVENI---HKMD-----------------DSYFG---EGLTLLNEKLYQVVWLK--NIGFIYDRRTLSN   98 (266)
T ss_dssp             CEEEEEETTTCCEEEE---EECC-----------------TTCCE---EEEEEETTEEEEEETTC--SEEEEEETTTTEE
T ss_pred             CEEEEEECCCCCEEEE---EecC-----------------CCcce---EEEEEeCCEEEEEEecC--CEEEEEECCCCcE
Confidence            6899999999874321   0111                 11111   23444566555555432  3499999998866


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC--CeEE--
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG--RFTV--  359 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~--~~~~--  359 (790)
                      ..-.....       ......++||++++ .+.      |      ...|+++|.++.+.     .+.+.-+  ...+  
T Consensus        99 ~~~i~~g~-------~~g~glt~Dg~~l~-vs~------g------s~~l~viD~~t~~v-----~~~I~Vg~~~~p~~~  153 (266)
T 2iwa_A           99 IKNFTHQM-------KDGWGLATDGKILY-GSD------G------TSILYEIDPHTFKL-----IKKHNVKYNGHRVIR  153 (266)
T ss_dssp             EEEEECCS-------SSCCEEEECSSSEE-EEC------S------SSEEEEECTTTCCE-----EEEEECEETTEECCC
T ss_pred             EEEEECCC-------CCeEEEEECCCEEE-EEC------C------CCeEEEEECCCCcE-----EEEEEECCCCccccc
Confidence            44332210       11355888999987 332      3      34899999988651     3333321  1111  


Q ss_pred             eEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc-eeeec-ccc-----cCCCcccEEEEEEecCCcEEEEEee
Q psy463          360 TEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE-CITCD-LLT-----SANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       360 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~lt~~-~~~-----~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      ...+.|. || .||......    ..|.+++.++  +++. .+... +..     ..........+.++|+++.++.+. 
T Consensus       154 ~nele~~-dg-~lyvn~~~~----~~V~vID~~t--g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg-  224 (266)
T 2iwa_A          154 LNELEYI-NG-EVWANIWQT----DCIARISAKD--GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG-  224 (266)
T ss_dssp             EEEEEEE-TT-EEEEEETTS----SEEEEEETTT--CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE-
T ss_pred             ceeEEEE-CC-EEEEecCCC----CeEEEEECCC--CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC-
Confidence            1235676 65 576554332    5899999987  5542 23211 100     000112457889999999876553 


Q ss_pred             cCCCCeEEEEecCC
Q psy463          433 GPGIPEIMLFDKTG  446 (790)
Q Consensus       433 ~~~~~~i~~~~~~~  446 (790)
                       ..-+.++.+++..
T Consensus       225 -k~~~~v~~i~l~~  237 (266)
T 2iwa_A          225 -KLWPKLFEIKLHL  237 (266)
T ss_dssp             -TTCSEEEEEEEEE
T ss_pred             -CCCCeEEEEEEec
Confidence             2346777776643

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=97.42  E-value=0.0089  Score=63.86  Aligned_cols=119  Identities=10%  Similarity=0.075  Sum_probs=68.0

Q ss_pred             CEEEEEEEccC-CcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          247 PVLSRVNWANE-SVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       247 ~~~~~~~wspD-g~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ..+..+.|+|+ +++++....+..   |.++|+.++.......  ...   .......|||||+.|+ +.+    .+|  
T Consensus       150 ~~V~~v~~~p~~~~~las~s~Dg~---v~iwD~~~~~~~~~~~--~~~---~~v~~v~wspdg~~la-sgs----~dg--  214 (434)
T 2oit_A          150 GMVIDMKWNPTVPSMVAVCLADGS---IAVLQVTETVKVCATL--PST---VAVTSVCWSPKGKQLA-VGK----QNG--  214 (434)
T ss_dssp             GSEEEEEECSSCTTEEEEEETTSC---EEEEEESSSEEEEEEE--CGG---GCEEEEEECTTSSCEE-EEE----TTS--
T ss_pred             CceEEEEECCCCCCEEEEEECCCe---EEEEEcCCCcceeecc--CCC---CceeEEEEcCCCCEEE-EEc----CCC--
Confidence            34678999998 566655544332   8888988874432121  101   1245789999999888 555    456  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccC-------CCeEEeEEEeeecCCCEEEEEEcC-CCC-ceEEEEEEEcCC
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTR-------GRFTVTEILAWDEKENNVYFLSTQ-GSP-IVQHMYRINIAD  393 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~-------~~~~~~~~~~~s~dg~~l~~~~~~-~~~-~~~~l~~~~~~~  393 (790)
                            .|.++|+.+..      ...+..       +...+.. +.|++++..++..+.. +.. ....++.+++..
T Consensus       215 ------~v~iwd~~~~~------~~~~~~~~~~~~~~~~~v~~-v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~  278 (434)
T 2oit_A          215 ------TVVQYLPTLQE------KKVIPCPPFYESDHPVRVLD-VLWIGTYVFAIVYAAADGTLETSPDVVMALLPK  278 (434)
T ss_dssp             ------CEEEECTTCCE------EEEECCCTTCCTTSCEEEEE-EEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred             ------cEEEEccCCcc------cccccCCcccCCCCceeEEE-EEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence                  58888887322      222211       1224444 8899988766444433 221 113455556544

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=97.41  E-value=0.011  Score=59.60  Aligned_cols=83  Identities=17%  Similarity=0.127  Sum_probs=44.7

Q ss_pred             EEEEEcc---CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccc----cC
Q psy463          250 SRVNWAN---ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQE----SD  322 (790)
Q Consensus       250 ~~~~wsp---Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~----~~  322 (790)
                      ..++|||   ||++++....+.   .|.+.|+++|++...+...  ..........+|||||+.++ ..+++..    ..
T Consensus       182 ~~l~fs~~~g~~~~LaSgS~D~---TIkIWDl~TGk~l~tL~g~--~~~v~~v~~vafSpdG~~lv-s~s~~~~~w~laS  255 (356)
T 2w18_A          182 TILTFAEVQGMQEALLGTTIMN---NIVIWNLKTGQLLKKMHID--DSYQASVCHKAYSEMGLLFI-VLSHPCAKESESL  255 (356)
T ss_dssp             CEEEEEEEETSTTEEEEEETTS---EEEEEETTTCCEEEEEECC--C---CCCEEEEEEETTEEEE-EEC----------
T ss_pred             eeEEeeccCCCCceEEEecCCC---cEEEEECCCCcEEEEEcCC--CcceeeeEEEEECCCCCEEE-EeccCCCcceeec
Confidence            3567777   556666655443   3999999999875554321  11111122457999999876 3331100    11


Q ss_pred             CCCCcCcccEEEEEEcCCCC
Q psy463          323 GSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~  342 (790)
                      |..    -..|.++|+.+++
T Consensus       256 Gs~----D~tIklWd~~tgk  271 (356)
T 2w18_A          256 RSP----VFQLIVINPKTTL  271 (356)
T ss_dssp             --C----CEEEEEEETTTTE
T ss_pred             cCC----CcEEEEEECCCCE
Confidence            210    2356677877765

>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A

Probab=97.25  E-value=0.00059  Score=68.37  Aligned_cols=95  Identities=13%  Similarity=-0.084  Sum_probs=57.5

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      ..|.||++||.+++.   ..|. .+. ..+   .+.|+.+|+++...              ...+.++.+.+..++....
T Consensus        23 ~~~~l~~~hg~~~~~---~~~~-~~~-~~L---~~~v~~~d~~~~~~--------------~~~~~~~a~~~~~~i~~~~   80 (283)
T 3tjm_A           23 SERPLFLVHPIEGST---TVFH-SLA-SRL---SIPTYGLQCTRAAP--------------LDSIHSLAAYYIDCIRQVQ   80 (283)
T ss_dssp             SSCCEEEECCTTCCS---GGGH-HHH-HHC---SSCEEEECCCTTSC--------------CSCHHHHHHHHHHHHTTTC
T ss_pred             CCCeEEEECCCCCCH---HHHH-HHH-Hhc---CceEEEEecCCCCC--------------CCCHHHHHHHHHHHHHHhC
Confidence            346688999988763   2222 122 222   28899999965221              1234454444433333121


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcC---CCCceE---EEEEeCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALD---PSNVFK---CGISVAPV  619 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~---p~~~~~---~~v~~~~~  619 (790)
                        ...++.++||||||.++..++.+.   +. .+.   .++++.+.
T Consensus        81 --~~~~~~l~GhS~Gg~va~~~a~~~~~~~~-~v~~~~~lvlid~~  123 (283)
T 3tjm_A           81 --PEGPYRVAGYSYGACVAFEMCSQLQAQQS-PAPTHNSLFLFDGS  123 (283)
T ss_dssp             --CSSCCEEEEETHHHHHHHHHHHHHHHHHT-TSCCCCEEEEESCC
T ss_pred             --CCCCEEEEEECHhHHHHHHHHHHHHHcCC-CCCccceEEEEcCC
Confidence              236899999999999999888754   43 555   66666654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.21  E-value=0.0018  Score=73.64  Aligned_cols=114  Identities=9%  Similarity=0.065  Sum_probs=70.4

Q ss_pred             EEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCccc
Q psy463          252 VNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWD  331 (790)
Q Consensus       252 ~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~  331 (790)
                      +++.+.+..++|++...  ..|+++++++...+.+......     ....++++|++..||+ +.    . +.     ..
T Consensus       458 lavD~~~g~LY~tD~~~--~~I~v~d~dg~~~~~l~~~~~~-----~P~giavDp~~g~ly~-td----~-~~-----~~  519 (699)
T 1n7d_A          458 LAVDWIHSNIYWTDSVL--GTVSVADTKGVKRKTLFREQGS-----KPRAIVVDPVHGFMYW-TD----W-GT-----PA  519 (699)
T ss_dssp             EECCCSSSBCEECCTTT--SCEEEEBSSSCCEEEECCCSSC-----CCCCEECCSSSSCCEE-CC----C-SS-----SC
T ss_pred             EEEEeeCCcEEEEeccC--CeEEEEecCCCceEEEEeCCCC-----CcceEEEccCCCcEEE-cc----c-CC-----CC
Confidence            45665566566665432  2489999887766655432211     1347889998887774 32    1 20     24


Q ss_pred             EEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          332 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       332 ~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      .|+++++++..      .+.|..........++|+|+++.||++....    ..|+++++++
T Consensus       520 ~I~~~~~dG~~------~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~----~~I~~~d~dG  571 (699)
T 1n7d_A          520 KIKKGGLNGVD------IYSLVTENIQWPNGITLDLLSGRLYWVDSKL----HSISSIDVNG  571 (699)
T ss_dssp             CEEBCCSSSCC------CCEESCSSCSSCCCEEECTTTCCEEEEETTT----TEEEEECSSS
T ss_pred             eEEEEeCCCCC------eeEEEeCCCCCccEEEEeccCCEEEEEecCC----CeEEEEccCC
Confidence            68999887654      3333222222222388999999899887553    4789999876

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.12  E-value=0.14  Score=53.54  Aligned_cols=183  Identities=13%  Similarity=0.034  Sum_probs=92.1

Q ss_pred             EEEEEEccCCcEEEEEec--cCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccc---cccCC
Q psy463          249 LSRVNWANESVVAAWVNR--VQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN---QESDG  323 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r--~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~---~~~~g  323 (790)
                      -..+..+|||-++.....  +.....|.++|.++++...-.......  ......+.|+||++.++ +....   .-..|
T Consensus       140 Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~--~~~~Yd~~~~p~~~~mv-sS~wg~p~~~~~g  216 (462)
T 2ece_A          140 LHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD--QYLAYDFWWNLPNEVLV-SSEWAVPNTIEDG  216 (462)
T ss_dssp             EEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT--CCCCCCEEEETTTTEEE-ECBCCCHHHHTTC
T ss_pred             ccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC--ccccceEEECCCCCEEE-EccCcCccccccc
Confidence            355688999932222222  123456999999998766433322111  11123588899999655 33210   00001


Q ss_pred             CCCcC----cccEEEEEEcCCCCcccCCCcccccCC-CeEE-eE-EEeeecCCCEEEEEEc-----CCCCceEEEEEEEc
Q psy463          324 STPVD----SWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTV-TE-ILAWDEKENNVYFLST-----QGSPIVQHMYRINI  391 (790)
Q Consensus       324 ~~~~~----~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~-~~-~~~~s~dg~~l~~~~~-----~~~~~~~~l~~~~~  391 (790)
                      .-+.+    .-.+|.++|+++++     ....+..+ .... .. .+.++|||+++|....     ..    ..|+++..
T Consensus       217 ~~~~~~~~~~~d~V~v~D~~~~k-----~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls----s~V~v~~~  287 (462)
T 2ece_A          217 LKLEHLKDRYGNRIHFWDLRKRK-----RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLS----SSIWLWFY  287 (462)
T ss_dssp             CCTTTHHHHSCCEEEEEETTTTE-----EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC----EEEEEEEE
T ss_pred             cchhhhhhccCCEEEEEECCCCc-----EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCC----ceEEEEEe
Confidence            00000    02589999998765     13334433 1111 11 1346999998888765     32    45544332


Q ss_pred             CCCCCCcceee---e-----cccccC---CC-cccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          392 ADPTATPECIT---C-----DLLTSA---NQ-KCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       392 ~~~~~~~~~lt---~-----~~~~~~---~~-~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      +++..+...+.   .     .+....   ++ ......+.+|+||++++++..+.  ..|.++++.
T Consensus       288 d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~--d~VavfdV~  351 (462)
T 2ece_A          288 EDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI--GEVRQYDIS  351 (462)
T ss_dssp             ETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT--TEEEEEECS
T ss_pred             cCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC--CEEEEEEec
Confidence            22101111110   0     000000   00 12345688999999998876554  478888864

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.12  E-value=0.00078  Score=76.65  Aligned_cols=164  Identities=12%  Similarity=0.054  Sum_probs=95.7

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCC----CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINE----GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~----g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ..+.|.+++..++|++....  .|+++++++    .....+...    +... ...+++.+.+..||+ +.     .+  
T Consensus       409 ~gla~d~~~~~Ly~sD~~~~--~I~~~~~~g~~~~~~~~~~i~~----~~~~-P~glavD~~~g~LY~-tD-----~~--  473 (699)
T 1n7d_A          409 VALDTEVASNRIYWSDLSQR--MICSTQLDRAHGVSSYDTVISR----DIQA-PDGLAVDWIHSNIYW-TD-----SV--  473 (699)
T ss_dssp             CCCEEETTTTEEEECCTTTT--SBEEEESCCCCC-CCCCCBCCS----CC---CCCEECCCSSSBCEE-CC-----TT--
T ss_pred             EEEccccccCeEEEEecCCC--eEEEEecCCCCCCcceEEEEeC----CCCC-cceEEEEeeCCcEEE-Ee-----cc--
Confidence            35789998888888865433  388888876    222222110    0001 235777777777774 32     12  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL  405 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~  405 (790)
                          ...|++++++++.      .+.|..........++++|+++.||++.....   ..|+++++++  ...+.+... 
T Consensus       474 ----~~~I~v~d~dg~~------~~~l~~~~~~~P~giavDp~~g~ly~td~~~~---~~I~~~~~dG--~~~~~l~~~-  537 (699)
T 1n7d_A          474 ----LGTVSVADTKGVK------RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTP---AKIKKGGLNG--VDIYSLVTE-  537 (699)
T ss_dssp             ----TSCEEEEBSSSCC------EEEECCCSSCCCCCEECCSSSSCCEECCCSSS---CCEEBCCSSS--CCCCEESCS-
T ss_pred             ----CCeEEEEecCCCc------eEEEEeCCCCCcceEEEccCCCcEEEcccCCC---CeEEEEeCCC--CCeeEEEeC-
Confidence                2368999988765      44443322222223788998888887654322   5788888876  333333211 


Q ss_pred             cccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEE
Q psy463          406 LTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLY  451 (790)
Q Consensus       406 ~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~  451 (790)
                           ....-..++++++++.|+++..  ....|+++++++...+.
T Consensus       538 -----~l~~PnGlavd~~~~~LY~aD~--~~~~I~~~d~dG~~~~~  576 (699)
T 1n7d_A          538 -----NIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKT  576 (699)
T ss_dssp             -----SCSSCCCEEECTTTCCEEEEET--TTTEEEEECSSSSCCEE
T ss_pred             -----CCCCccEEEEeccCCEEEEEec--CCCeEEEEccCCCceEE
Confidence                 1122345889999887766542  24678888887754443

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=97.10  E-value=0.09  Score=55.97  Aligned_cols=158  Identities=11%  Similarity=0.098  Sum_probs=80.3

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .....+..+.|  ||+.++....+.   .|.++|+.++++.......  ...   .....|  +++.|+ +.+    .+|
T Consensus       254 ~~~~~v~~~~~--~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~--~~~---v~~~~~--~~~~l~-~g~----~dg  316 (435)
T 1p22_A          254 GHRAAVNVVDF--DDKYIVSASGDR---TIKVWNTSTCEFVRTLNGH--KRG---IACLQY--RDRLVV-SGS----SDN  316 (435)
T ss_dssp             CCSSCEEEEEE--ETTEEEEEETTS---EEEEEETTTCCEEEEEECC--SSC---EEEEEE--ETTEEE-EEE----TTS
T ss_pred             CCCCcEEEEEe--CCCEEEEEeCCC---eEEEEECCcCcEEEEEcCC--CCc---EEEEEe--CCCEEE-EEe----CCC
Confidence            33455666777  788555554332   3899999988765444321  111   223344  677666 554    455


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC---cce
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT---PEC  400 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~---~~~  400 (790)
                              .|.++|+.+++     ....+..+...+.. +.|  +++.|+..+.++.   ..+|.+........   ..+
T Consensus       317 --------~i~iwd~~~~~-----~~~~~~~h~~~v~~-~~~--~~~~l~sg~~dg~---i~vwd~~~~~~~~~~~~~~~  377 (435)
T 1p22_A          317 --------TIRLWDIECGA-----CLRVLEGHEELVRC-IRF--DNKRIVSGAYDGK---IKVWDLVAALDPRAPAGTLC  377 (435)
T ss_dssp             --------CEEEEETTTCC-----EEEEECCCSSCEEE-EEC--CSSEEEEEETTSC---EEEEEHHHHTSTTSCTTTTE
T ss_pred             --------eEEEEECCCCC-----EEEEEeCCcCcEEE-EEe--cCCEEEEEeCCCc---EEEEECCCCCCccccccchh
Confidence                    68899998776     23445444434443 455  7787777666643   45554322110000   001


Q ss_pred             eeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      +..    ..+....+..+.|  |+++++..   ..-..|.++++.+
T Consensus       378 ~~~----~~~h~~~v~~l~~--~~~~l~s~---s~Dg~i~iwd~~~  414 (435)
T 1p22_A          378 LRT----LVEHSGRVFRLQF--DEFQIVSS---SHDDTILIWDFLN  414 (435)
T ss_dssp             EEE----ECCCSSCCCCEEE--CSSCEEEC---CSSSEEEEEC---
T ss_pred             eee----ccCCCCCeEEEEe--CCCEEEEE---eCCCEEEEEECCC
Confidence            111    1113334455566  66665432   2234677777654

>1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5

Probab=97.03  E-value=0.0057  Score=59.22  Aligned_cols=145  Identities=13%  Similarity=0.084  Sum_probs=80.7

Q ss_pred             EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccc-cccc-------------cchHHHHHhcCCeEEEE
Q psy463          473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVT-ERFS-------------VDWNLYLADNKDIVVAY  538 (790)
Q Consensus       473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~-~~~~-------------~~~~~~~~~~~G~~v~~  538 (790)
                      +.+....+..+.++.+.....   .....|++++++||||+..+. ..+.             ......-.. .-..++.
T Consensus        29 v~v~~~~~~~lFywf~es~~~---~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~-~~anllf  104 (270)
T 1gxs_A           29 VTIDDNNGRALYYWFQEADTA---DPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWN-KAANILF  104 (270)
T ss_dssp             EEEETTTTEEEEEEEECCCSS---CGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGG-GTSEEEE
T ss_pred             EEcCCCCCcEEEEEEEEecCC---CCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchh-ccccEEE
Confidence            344434567888888865221   235679999999999985532 1100             000001111 2356899


Q ss_pred             EcC-CCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHH---HHhcC---CCCceE
Q psy463          539 IDG-RNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGL---ALALD---PSNVFK  611 (790)
Q Consensus       539 ~d~-rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~---~a~~~---p~~~~~  611 (790)
                      +|. .|.|.+-.. ....+..-....+.|+..+++...+.++.....++.|+|.| |-++...   +....   +.-.++
T Consensus       105 iDqPvGtGfSy~~-~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLk  182 (270)
T 1gxs_A          105 AESPAGVGFSYSN-TSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQ  182 (270)
T ss_dssp             ECCSTTSTTCEES-SGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEE
T ss_pred             EeccccccccCCC-CCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeee
Confidence            995 576543111 11111000112255666666655554776767789999999 6655433   22221   123688


Q ss_pred             EEEEeCCCCCcc
Q psy463          612 CGISVAPVTDWI  623 (790)
Q Consensus       612 ~~v~~~~~~~~~  623 (790)
                      +++.+.|+++..
T Consensus       183 Gi~ign~~~d~~  194 (270)
T 1gxs_A          183 GLLVSSGLTNDH  194 (270)
T ss_dssp             EEEEESCCCBHH
T ss_pred             eEEEeCCccChh
Confidence            999999998754

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=97.00  E-value=0.26  Score=48.85  Aligned_cols=153  Identities=9%  Similarity=0.053  Sum_probs=83.9

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ....+.++|||++.+....   ...|++++. +++...+..... .   .......+++||+ +++...    ..     
T Consensus       100 ~~~~i~~~~~g~l~v~~~~---~~~i~~~d~-~g~~~~~~~~~~-~---~~~~~i~~~~~g~-l~v~~~----~~-----  161 (299)
T 2z2n_A          100 APYGITEGPNGDIWFTEMN---GNRIGRITD-DGKIREYELPNK-G---SYPSFITLGSDNA-LWFTEN----QN-----  161 (299)
T ss_dssp             CEEEEEECTTSCEEEEETT---TTEEEEECT-TCCEEEEECSST-T---CCEEEEEECTTSC-EEEEET----TT-----
T ss_pred             CceeeEECCCCCEEEEecC---CceEEEECC-CCCEEEecCCCC-C---CCCceEEEcCCCC-EEEEeC----CC-----
Confidence            4567888999984333322   123888988 565543322110 1   1123678899996 553332    22     


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccc--cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPL--TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL  405 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~l--t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~  405 (790)
                         ..|++++. +++      ...+  ......... +.++++|+ ||+.....    ..|++++. .  ++...+..  
T Consensus       162 ---~~i~~~~~-~g~------~~~~~~~~~~~~~~~-i~~~~~g~-l~v~~~~~----~~i~~~~~-~--g~~~~~~~--  220 (299)
T 2z2n_A          162 ---NAIGRITE-SGD------ITEFKIPTPASGPVG-ITKGNDDA-LWFVEIIG----NKIGRITT-S--GEITEFKI--  220 (299)
T ss_dssp             ---TEEEEECT-TCC------EEEEECSSTTCCEEE-EEECTTSS-EEEEETTT----TEEEEECT-T--CCEEEEEC--
T ss_pred             ---CEEEEEcC-CCc------EEEeeCCCCCCccee-EEECCCCC-EEEEccCC----ceEEEECC-C--CcEEEEEC--
Confidence               36999998 554      3332  222222333 67889887 66655432    46888887 3  34333321  


Q ss_pred             cccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          406 LTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       406 ~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                         .........+.++++|+.+ +..  .....|++++.+
T Consensus       221 ---~~~~~~~~~i~~~~~g~l~-v~~--~~~~~i~~~d~~  254 (299)
T 2z2n_A          221 ---PTPNARPHAITAGAGIDLW-FTE--WGANKIGRLTSN  254 (299)
T ss_dssp             ---SSTTCCEEEEEECSTTCEE-EEE--TTTTEEEEEETT
T ss_pred             ---CCCCCCceeEEECCCCCEE-Eec--cCCceEEEECCC
Confidence               1123456678889998843 332  123457777763

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=96.97  E-value=0.05  Score=55.90  Aligned_cols=158  Identities=12%  Similarity=0.099  Sum_probs=81.1

Q ss_pred             EEEEEEEccCCcEEEEEeccC-cceEEEEEECCCCceeEEEEEe-C----------CCc-------------ccccCCce
Q psy463          248 VLSRVNWANESVVAAWVNRVQ-NRARITRCSINEGTCDVVFSRD-L----------DRG-------------WFEPFDHL  302 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~-~~~~i~~~~~~~g~~~~l~~~~-~----------~~~-------------~~~~~~~~  302 (790)
                      ....+.++|++..++.++... ....|+++++.+++..++.... .          +..             |......+
T Consensus       121 ~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gi  200 (343)
T 2qe8_A          121 FVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGI  200 (343)
T ss_dssp             CCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEE
T ss_pred             ccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceeccccee
Confidence            345788898766555554311 2345999999888765543110 0          000             11112468


Q ss_pred             eEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC---CCcccCCCc-ccccC-CCeEEeEEEeeecCCCEEEEEEc
Q psy463          303 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD---QAGIKDKVP-VPLTR-GRFTVTEILAWDEKENNVYFLST  377 (790)
Q Consensus       303 ~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~---~~~~~~~~~-~~lt~-~~~~~~~~~~~s~dg~~l~~~~~  377 (790)
                      +|||||+.|++...     .+       ..||.++.+.   +. ..+... ..++. +.......++++++|. ||+...
T Consensus       201 a~s~dg~~ly~~~~-----~~-------~~l~~~~~~~~~~~~-~~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~  266 (343)
T 2qe8_A          201 VLDAENEWLYLSPM-----HS-------TSMYRIKSADLSNLQ-LTDAELGSKIERYSEKPICDGISIDKDHN-IYVGDL  266 (343)
T ss_dssp             EECTTSCEEEEEES-----SC-------SEEEEEEHHHHTCTT-CCHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEG
T ss_pred             EeccCCCEEEEEeC-----CC-------CeEEEEEHHHhcCCC-CChhhhhcceEecccCCCCceEEECCCCC-EEEEcc
Confidence            99999998885433     33       3799998531   11 000000 00110 0000111267899985 666554


Q ss_pred             CCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          378 QGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       378 ~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      ..    ..|++++.+.  ++.+.+...    . .......+.++++|+.++..
T Consensus       267 ~~----~~V~~~d~~~--G~~~~~~~~----~-~~~~p~~va~~~~g~l~v~~  308 (343)
T 2qe8_A          267 AH----SAIGVITSAD--RAYKLLVTD----E-KLSWTDSFNFGSDGYLYFDC  308 (343)
T ss_dssp             GG----TEEEEEETTT--TEEEEEEEC----G-GGSCEEEEEECTTSCEEEEE
T ss_pred             CC----CeEEEEECCC--CCEEEEEEC----C-ceecCCeeEECCCCcEEEEe
Confidence            43    4788888733  343333321    0 12245678888887754443

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=96.94  E-value=0.17  Score=50.90  Aligned_cols=100  Identities=15%  Similarity=0.097  Sum_probs=53.7

Q ss_pred             ccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC-CCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          305 SSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD-QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       305 spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      +|||+.|++.-.      +      ...|+++++++ ++. .  ..+.+....  ...-+++++||+ ||+ +..+.   
T Consensus       175 s~dg~~lyv~d~------~------~~~I~~~~~~~~g~~-~--~~~~~~~~~--~P~gi~vd~dG~-l~v-a~~~~---  232 (306)
T 2p4o_A          175 KRFGNFLYVSNT------E------KMLLLRIPVDSTDKP-G--EPEIFVEQT--NIDDFAFDVEGN-LYG-ATHIY---  232 (306)
T ss_dssp             EEETTEEEEEET------T------TTEEEEEEBCTTSCB-C--CCEEEEESC--CCSSEEEBTTCC-EEE-ECBTT---
T ss_pred             CcCCCEEEEEeC------C------CCEEEEEEeCCCCCC-C--ccEEEeccC--CCCCeEECCCCC-EEE-EeCCC---
Confidence            999998885333      2      34799999875 330 0  011111110  111267889986 544 44432   


Q ss_pred             EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEe---cCCcEEEEEeec
Q psy463          384 QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFS---TNVSYYVLSCIG  433 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s---~dg~~~~~~~~~  433 (790)
                      ..|++++.++   +...+.. +.   ........+.|+   +|+++++.+..+
T Consensus       233 ~~V~~~~~~G---~~~~~~~-~~---~~~~~p~~~a~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          233 NSVVRIAPDR---STTIIAQ-AE---QGVIGSTAVAFGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             CCEEEECTTC---CEEEEEC-GG---GTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             CeEEEECCCC---CEEEEee-cc---cccCCceEEEEecccCCCCEEEEECCC
Confidence            4688887654   3322211 00   012345668888   888888766543

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=96.91  E-value=0.033  Score=53.65  Aligned_cols=118  Identities=8%  Similarity=0.003  Sum_probs=63.4

Q ss_pred             EEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccE
Q psy463          253 NWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDH  332 (790)
Q Consensus       253 ~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~  332 (790)
                      ..++||+.++.++.   ...|+.+|.++.+...-........-+.......|. ||+ |+....     ..       ..
T Consensus       140 GLt~Dg~~L~vSdG---s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw-----~s-------~~  202 (268)
T 3nok_A          140 GLCYWNGKLVRSDG---GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIW-----HS-------SD  202 (268)
T ss_dssp             CEEEETTEEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEET-----TC-------SE
T ss_pred             EEecCCCEEEEECC---CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEEC-----CC-------Ce
Confidence            34578886666653   335999999997664333221111111111234566 774 653222     22       37


Q ss_pred             EEEEEcCCCCcccCCCcccc-------cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463          333 LTFIDLDDQAGIKDKVPVPL-------TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       333 l~~~d~~~~~~~~~~~~~~l-------t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                      |.++|.++|+-........|       ......+..-++|+|++++||++... -   ..||.+.+
T Consensus       203 I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~-W---p~~~ev~~  264 (268)
T 3nok_A          203 VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL-W---PRLFEVRL  264 (268)
T ss_dssp             EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT-C---SEEEEEEE
T ss_pred             EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC-C---CceEEEEE
Confidence            99999988861111101111       11122344448999999988776544 3   36776654

>4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A*

Probab=96.90  E-value=0.016  Score=57.07  Aligned_cols=147  Identities=12%  Similarity=0.092  Sum_probs=85.6

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-------------chHHHHHhcCCeEE
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-------------DWNLYLADNKDIVV  536 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-------------~~~~~~~~~~G~~v  536 (790)
                      ...-.+...++..+..|.+...+    .....|+|+++-||||...+...+..             .....-.. .-..+
T Consensus        23 ~ysGyv~v~~~~~lFywf~es~~----~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~-~~an~   97 (300)
T 4az3_A           23 QYSGYLKGSGSKHLHYWFVESQK----DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWN-LIANV   97 (300)
T ss_dssp             EEEEEEECSTTEEEEEEEECCSS----CTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGG-GSSEE
T ss_pred             eeeeeeecCCCCeEEEEEEEcCC----CCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHH-hhhcc
Confidence            44455666678889988886553    33567999999999997542111100             00000011 23468


Q ss_pred             EEEcCC-CCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh---cCCCCceEE
Q psy463          537 AYIDGR-NSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA---LDPSNVFKC  612 (790)
Q Consensus       537 ~~~d~r-G~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~---~~p~~~~~~  612 (790)
                      +.+|.+ |.|.+ .... .....-......|+...++...+.++.....++.|+|-||||..+..+|.   ..+.-.+++
T Consensus        98 lfiD~PvGtGfS-y~~~-~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG  175 (300)
T 4az3_A           98 LYLESPAGVGFS-YSDD-KFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQG  175 (300)
T ss_dssp             EEECCSTTSTTC-EETT-CCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEE
T ss_pred             hhhcCCCccccc-ccCC-CcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCccccc
Confidence            888866 54432 1100 00000011234455555543334477666789999999999988766553   233346889


Q ss_pred             EEEeCCCCCcc
Q psy463          613 GISVAPVTDWI  623 (790)
Q Consensus       613 ~v~~~~~~~~~  623 (790)
                      ++.+.|+++..
T Consensus       176 ~~iGNg~~d~~  186 (300)
T 4az3_A          176 LAVGNGLSSYE  186 (300)
T ss_dssp             EEEESCCSBHH
T ss_pred             ceecCCccCHH
Confidence            99999998864

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=96.90  E-value=0.42  Score=47.84  Aligned_cols=160  Identities=14%  Similarity=0.166  Sum_probs=83.4

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      .....++++|||++ +..+...+...|+.++..+|+.+.+..... ...   ...+...+++ .+++.-.    ..|   
T Consensus        72 ~~p~gia~~~dG~l-~vad~~~~~~~v~~~d~~~g~~~~~~~~~~-~~~---~~g~~~~~~~-~~~v~d~----~~g---  138 (306)
T 2p4o_A           72 GKVSGLAFTSNGDL-VATGWNADSIPVVSLVKSDGTVETLLTLPD-AIF---LNGITPLSDT-QYLTADS----YRG---  138 (306)
T ss_dssp             SEEEEEEECTTSCE-EEEEECTTSCEEEEEECTTSCEEEEEECTT-CSC---EEEEEESSSS-EEEEEET----TTT---
T ss_pred             CCceeEEEcCCCcE-EEEeccCCcceEEEEcCCCCeEEEEEeCCC-ccc---cCcccccCCC-cEEEEEC----CCC---
Confidence            34667889999993 223322222358888888888776654321 111   1133444444 4543221    234   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcc----cc----cCCCe-EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPV----PL----TRGRF-TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT  397 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~----~l----t~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~  397 (790)
                           .||++|..+++.    ...    .+    ..+.. ...+ +  ++|++.||+.....    ..|+++++++. ++
T Consensus       139 -----~i~~~d~~~~~~----~v~~~~~~~~~~~~~~~~~~png-i--s~dg~~lyv~d~~~----~~I~~~~~~~~-g~  201 (306)
T 2p4o_A          139 -----AIWLIDVVQPSG----SIWLEHPMLARSNSESVFPAANG-L--KRFGNFLYVSNTEK----MLLLRIPVDST-DK  201 (306)
T ss_dssp             -----EEEEEETTTTEE----EEEEECGGGSCSSTTCCSCSEEE-E--EEETTEEEEEETTT----TEEEEEEBCTT-SC
T ss_pred             -----eEEEEeCCCCcE----eEEEECCccccccccCCCCcCCC-c--CcCCCEEEEEeCCC----CEEEEEEeCCC-CC
Confidence                 799999875420    010    01    01111 1122 3  88999888876653    47888888641 22


Q ss_pred             c---ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          398 P---ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       398 ~---~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      .   +.+..        ...-..+.++++|+.++...   ....|.+++.++.
T Consensus       202 ~~~~~~~~~--------~~~P~gi~vd~dG~l~va~~---~~~~V~~~~~~G~  243 (306)
T 2p4o_A          202 PGEPEIFVE--------QTNIDDFAFDVEGNLYGATH---IYNSVVRIAPDRS  243 (306)
T ss_dssp             BCCCEEEEE--------SCCCSSEEEBTTCCEEEECB---TTCCEEEECTTCC
T ss_pred             CCccEEEec--------cCCCCCeEECCCCCEEEEeC---CCCeEEEECCCCC
Confidence            1   11111        01223467888887433321   2345777877643

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=96.88  E-value=0.24  Score=52.64  Aligned_cols=224  Identities=13%  Similarity=0.092  Sum_probs=116.9

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      .+++||+.|+..+. +            +.|.++++.+++     ....+......+..+ .+  +++  +++...    
T Consensus       138 ~~~~d~~~l~~g~~-d------------g~i~iwd~~~~~-----~~~~~~~h~~~v~~l-~~--~~~--~l~sg~----  190 (435)
T 1p22_A          138 CLQYDDQKIVSGLR-D------------NTIKIWDKNTLE-----CKRILTGHTGSVLCL-QY--DER--VIITGS----  190 (435)
T ss_dssp             EEECCSSEEEEEES-S------------SCEEEEESSSCC-----EEEEECCCSSCEEEE-EC--CSS--EEEEEE----
T ss_pred             EEEECCCEEEEEeC-C------------CeEEEEeCCCCe-----EEEEEcCCCCcEEEE-EE--CCC--EEEEEc----
Confidence            45678887775442 1            268888887763     233344333344333 33  222  333322    


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT  274 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~  274 (790)
                             ....|.+.|+.+++.     ...+.                 .....+..+.|++  ..++....+.   .|.
T Consensus       191 -------~dg~i~vwd~~~~~~-----~~~~~-----------------~h~~~v~~l~~~~--~~l~s~s~dg---~i~  236 (435)
T 1p22_A          191 -------SDSTVRVWDVNTGEM-----LNTLI-----------------HHCEAVLHLRFNN--GMMVTCSKDR---SIA  236 (435)
T ss_dssp             -------TTSCEEEEESSSCCE-----EEEEC-----------------CCCSCEEEEECCT--TEEEEEETTS---CEE
T ss_pred             -------CCCeEEEEECCCCcE-----EEEEc-----------------CCCCcEEEEEEcC--CEEEEeeCCC---cEE
Confidence                   125788888887753     12222                 3445577788863  3443333322   288


Q ss_pred             EEECCCCceeEEEEE-eCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          275 RCSINEGTCDVVFSR-DLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       275 ~~~~~~g~~~~l~~~-~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      ++|+.++....+... .+....   .....|  ||+.|+ +.+    .+|        .|.++|+.+++     ....+.
T Consensus       237 vwd~~~~~~~~~~~~~~~~~~~---v~~~~~--~~~~l~-s~~----~dg--------~i~vwd~~~~~-----~~~~~~  293 (435)
T 1p22_A          237 VWDMASPTDITLRRVLVGHRAA---VNVVDF--DDKYIV-SAS----GDR--------TIKVWNTSTCE-----FVRTLN  293 (435)
T ss_dssp             EEECSSSSCCEEEEEECCCSSC---EEEEEE--ETTEEE-EEE----TTS--------EEEEEETTTCC-----EEEEEE
T ss_pred             EEeCCCCCCceeeeEecCCCCc---EEEEEe--CCCEEE-EEe----CCC--------eEEEEECCcCc-----EEEEEc
Confidence            889888765433221 111111   223444  888776 555    455        68999998776     233444


Q ss_pred             CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          354 RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       354 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      .....+.. +.|  +++.++..+.+     ..|...++..  ++. ..+..       ....+..+.+  ++++++....
T Consensus       294 ~~~~~v~~-~~~--~~~~l~~g~~d-----g~i~iwd~~~--~~~~~~~~~-------h~~~v~~~~~--~~~~l~sg~~  354 (435)
T 1p22_A          294 GHKRGIAC-LQY--RDRLVVSGSSD-----NTIRLWDIEC--GACLRVLEG-------HEELVRCIRF--DNKRIVSGAY  354 (435)
T ss_dssp             CCSSCEEE-EEE--ETTEEEEEETT-----SCEEEEETTT--CCEEEEECC-------CSSCEEEEEC--CSSEEEEEET
T ss_pred             CCCCcEEE-EEe--CCCEEEEEeCC-----CeEEEEECCC--CCEEEEEeC-------CcCcEEEEEe--cCCEEEEEeC
Confidence            44333433 445  56766666655     3455666655  332 11211       3344555555  7777655432


Q ss_pred             cCCCCeEEEEec
Q psy463          433 GPGIPEIMLFDK  444 (790)
Q Consensus       433 ~~~~~~i~~~~~  444 (790)
                      .   ..|.++|+
T Consensus       355 d---g~i~vwd~  363 (435)
T 1p22_A          355 D---GKIKVWDL  363 (435)
T ss_dssp             T---SCEEEEEH
T ss_pred             C---CcEEEEEC
Confidence            2   34666665

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=96.87  E-value=0.098  Score=53.23  Aligned_cols=174  Identities=10%  Similarity=0.027  Sum_probs=92.4

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCc---------------------ceEEEEEECCCCceeEEEEEeCCCcccccCCceeE
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQN---------------------RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRF  304 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~---------------------~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~  304 (790)
                      -.....++++|||++++.......                     ...|+++|.++|+.......   .. +.....+++
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~---~~-~~~p~gia~   98 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK---NL-FYLPHGLSI   98 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT---TT-CSSEEEEEE
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC---Cc-cCCceEEEE
Confidence            455788999999995443322210                     02599999988876533221   11 111336889


Q ss_pred             ccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc--------CCCeEEeEEEeeecCCCEEEEEE
Q psy463          305 SSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT--------RGRFTVTEILAWDEKENNVYFLS  376 (790)
Q Consensus       305 spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt--------~~~~~~~~~~~~s~dg~~l~~~~  376 (790)
                      +|||+ |++...      +      ...|++++.++...    ....+.        .+.......++++|++..||+..
T Consensus        99 d~~g~-l~v~d~------~------~~~v~~~~~~g~~~----~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d  161 (329)
T 3fvz_A           99 DTDGN-YWVTDV------A------LHQVFKLDPHSKEG----PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSD  161 (329)
T ss_dssp             CTTSC-EEEEET------T------TTEEEEECTTCSSC----CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEE
T ss_pred             CCCCC-EEEEEC------C------CCEEEEEeCCCCeE----EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEe
Confidence            99999 553333      2      23799999876520    022221        11111122378999545577776


Q ss_pred             cCCCCceEEEEEEEcCCCCCCcceeeecccc---cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          377 TQGSPIVQHMYRINIADPTATPECITCDLLT---SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       377 ~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~---~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      ..+.   ..|++++.++  .....+...-..   ..........++++|++..++++..  ....|.+++.+++
T Consensus       162 ~~~~---~~I~~~~~~g--~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~--~~~~I~~~~~~~G  228 (329)
T 3fvz_A          162 GYCN---SRIVQFSPSG--KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR--ENGRIQCFKTDTK  228 (329)
T ss_dssp             CSSC---CEEEEECTTS--CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET--TTTEEEEEETTTC
T ss_pred             CCCC---CeEEEEcCCC--CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC--CCCEEEEEECCCC
Confidence            4222   5788887554  222222110000   0001122567889999555544432  2457888888743

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=96.82  E-value=0.52  Score=50.04  Aligned_cols=174  Identities=13%  Similarity=0.106  Sum_probs=93.1

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|.++|+.+++..     ..+.                 .....+..+.|  ||+.++....+.   .|.++|+.++++
T Consensus       219 g~i~~wd~~~~~~~-----~~~~-----------------~~~~~v~~~~~--~~~~l~~~~~dg---~i~iwd~~~~~~  271 (445)
T 2ovr_B          219 ATLRVWDIETGQCL-----HVLM-----------------GHVAAVRCVQY--DGRRVVSGAYDF---MVKVWDPETETC  271 (445)
T ss_dssp             SEEEEEESSSCCEE-----EEEE-----------------CCSSCEEEEEE--CSSCEEEEETTS---CEEEEEGGGTEE
T ss_pred             CEEEEEECCCCcEE-----EEEc-----------------CCcccEEEEEE--CCCEEEEEcCCC---EEEEEECCCCcE
Confidence            57888888876531     1222                 33445566666  788444443322   288889888765


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEE
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL  363 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~  363 (790)
                      ......  ...   ......|  ||+.|+ +.+    .+|        .|.++|+.+++     ....+......+.   
T Consensus       272 ~~~~~~--~~~---~v~~~~~--~~~~l~-~~~----~d~--------~i~i~d~~~~~-----~~~~~~~~~~~v~---  323 (445)
T 2ovr_B          272 LHTLQG--HTN---RVYSLQF--DGIHVV-SGS----LDT--------SIRVWDVETGN-----CIHTLTGHQSLTS---  323 (445)
T ss_dssp             EEEECC--CSS---CEEEEEE--CSSEEE-EEE----TTS--------CEEEEETTTCC-----EEEEECCCCSCEE---
T ss_pred             eEEecC--CCC---ceEEEEE--CCCEEE-EEe----CCC--------eEEEEECCCCC-----EEEEEcCCcccEE---
Confidence            443321  111   1224445  888776 554    455        58899998776     1334443333232   


Q ss_pred             eeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEE
Q psy463          364 AWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLF  442 (790)
Q Consensus       364 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~  442 (790)
                      .++++++.++..+.++     .|...++..  ++. ..+..    .......+..+.++  +++++....   -..|.++
T Consensus       324 ~~~~~~~~l~~~~~dg-----~i~vwd~~~--~~~~~~~~~----~~~~~~~v~~~~~~--~~~l~s~~~---dg~v~iw  387 (445)
T 2ovr_B          324 GMELKDNILVSGNADS-----TVKIWDIKT--GQCLQTLQG----PNKHQSAVTCLQFN--KNFVITSSD---DGTVKLW  387 (445)
T ss_dssp             EEEEETTEEEEEETTS-----CEEEEETTT--CCEEEEECS----TTSCSSCEEEEEEC--SSEEEEEET---TSEEEEE
T ss_pred             EEEEeCCEEEEEeCCC-----eEEEEECCC--CcEEEEEcc----CCCCCCCEEEEEEC--CCEEEEEeC---CCeEEEE
Confidence            3445677666665553     455556654  332 22211    00123445556664  566654432   3468888


Q ss_pred             ecCCCe
Q psy463          443 DKTGQR  448 (790)
Q Consensus       443 ~~~~~~  448 (790)
                      ++.+++
T Consensus       388 d~~~~~  393 (445)
T 2ovr_B          388 DLKTGE  393 (445)
T ss_dssp             ETTTCC
T ss_pred             ECCCCc
Confidence            887653

>1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5

Probab=96.81  E-value=0.012  Score=63.07  Aligned_cols=63  Identities=8%  Similarity=-0.021  Sum_probs=51.3

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhc----------------------------C-----CceEEEEcCCCCCcCC
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHA----------------------------D-----IMFQSQTYPDEEHGLI  771 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~----------------------------g-----~~~~~~~~p~~~H~~~  771 (790)
                      ..++||.+|..|.+|+...++.+.+.|.=.                            |     ....++.+-++||+..
T Consensus       372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP  451 (483)
T 1ac5_A          372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP  451 (483)
T ss_dssp             TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred             CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence            589999999999999999999988887510                            1     0246778889999998


Q ss_pred             C-cchHHHHHHHHHHHH
Q psy463          772 G-VRPHFYHTLERFLDS  787 (790)
Q Consensus       772 ~-~~~~~~~~i~~fl~~  787 (790)
                      . .++..+..+..||..
T Consensus       452 ~dqP~~al~m~~~fl~~  468 (483)
T 1ac5_A          452 FDKSLVSRGIVDIYSND  468 (483)
T ss_dssp             HHCHHHHHHHHHHHTTC
T ss_pred             chhHHHHHHHHHHHHCC
Confidence            7 888888888888864

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=96.79  E-value=0.12  Score=49.14  Aligned_cols=120  Identities=11%  Similarity=0.080  Sum_probs=63.6

Q ss_pred             EEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccE
Q psy463          253 NWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDH  332 (790)
Q Consensus       253 ~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~  332 (790)
                      ..++||+.++.++.   ...|+.+|.++.+...-........-+.......|. ||+ |+....     .       ...
T Consensus       109 glt~dg~~L~vSdg---s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lyanvw-----~-------s~~  171 (243)
T 3mbr_X          109 ALTSDDSHLYMSDG---TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLANVW-----L-------TSR  171 (243)
T ss_dssp             EEEECSSCEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEET-----T-------TTE
T ss_pred             EEeeCCCEEEEECC---CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EEEEEC-----C-------CCe
Confidence            44578886655653   234999999987654332221111000001133444 665 552222     1       237


Q ss_pred             EEEEEcCCCCcccCCCccccc-------CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          333 LTFIDLDDQAGIKDKVPVPLT-------RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       333 l~~~d~~~~~~~~~~~~~~lt-------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      |.++|+++|+-........|.       .....+..-++|+|++++||+++-. -   ..||.+.+..
T Consensus       172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~-w---p~~~~v~~~~  235 (243)
T 3mbr_X          172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR-W---PMLYEIRLTP  235 (243)
T ss_dssp             EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT-C---SEEEEEEECC
T ss_pred             EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC-C---CcEEEEEEec
Confidence            999999888611111111111       1122344448999999988777654 3   3688877643

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=96.77  E-value=0.43  Score=46.03  Aligned_cols=166  Identities=10%  Similarity=0.074  Sum_probs=85.8

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-eEEEEEeCC---CcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-DVVFSRDLD---RGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~---~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      -...+++.+||+++....+.   .+++++++..... ..+......   ..--......+|+|++++|++ +.   ++. 
T Consensus        71 D~EGIa~~~~g~~~vs~E~~---~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v-a~---E~~-  142 (255)
T 3qqz_A           71 DLETIEYIGDNQFVISDERD---YAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF-FK---EKN-  142 (255)
T ss_dssp             SEEEEEECSTTEEEEEETTT---TEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE-EE---ESS-
T ss_pred             ChHHeEEeCCCEEEEEECCC---CcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEE-EE---CcC-
Confidence            35567888888854443332   2377766654332 222222110   000011358999999999984 54   232 


Q ss_pred             CCCcCcccEEEEEE--cCCCCcccCCCcccc-----c--CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCC
Q psy463          324 STPVDSWDHLTFID--LDDQAGIKDKVPVPL-----T--RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADP  394 (790)
Q Consensus       324 ~~~~~~~~~l~~~d--~~~~~~~~~~~~~~l-----t--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~  394 (790)
                            ...||.++  +.+..      ...+     .  ..-.+..+ ++++|..+.+|+.+...    ..|..++..+ 
T Consensus       143 ------p~~i~~~~g~~~~~~------l~i~~~~~~~~~~~~~d~S~-l~~dp~tg~lliLS~~s----~~L~~~d~~g-  204 (255)
T 3qqz_A          143 ------PIEVYKVNGLLSSNE------LHISKDKALQRQFTLDDVSG-AEFNQQKNTLLVLSHES----RALQEVTLVG-  204 (255)
T ss_dssp             ------SEEEEEEESTTCSSC------CEEEECHHHHHTCCSSCCCE-EEEETTTTEEEEEETTT----TEEEEECTTC-
T ss_pred             ------CceEEEEcccccCCc------eeeecchhhccccccCCcee-EEEcCCCCeEEEEECCC----CeEEEEcCCC-
Confidence                  23688887  11111      1111     0  01112333 78999999999998874    4788888776 


Q ss_pred             CCCcce--eeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463          395 TATPEC--ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK  444 (790)
Q Consensus       395 ~~~~~~--lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~  444 (790)
                       .....  |..+...+...-.....+++.++|+ ++.+ +.  +..+|++..
T Consensus       205 -~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE--~n~~y~f~~  251 (255)
T 3qqz_A          205 -EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SE--PNRFYRFTP  251 (255)
T ss_dssp             -CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ET--TTEEEEEEC
T ss_pred             -CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cC--CceEEEEEe
Confidence             21111  1111000000112456789999997 3333 33  346777643

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=96.72  E-value=0.2  Score=48.22  Aligned_cols=179  Identities=11%  Similarity=0.101  Sum_probs=98.6

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      +.|.++|+++|+..+.     +.                 -... ......+++|+.++..+..  ...++++|.++.+.
T Consensus        65 S~v~~vD~~Tgkv~~~-----~~-----------------l~~~-~FgeGit~~g~~ly~ltw~--~~~v~v~D~~t~~~  119 (262)
T 3nol_A           65 SSIRKVDIESGKTLQQ-----IE-----------------LGKR-YFGEGISDWKDKIVGLTWK--NGLGFVWNIRNLRQ  119 (262)
T ss_dssp             EEEEEECTTTCCEEEE-----EE-----------------CCTT-CCEEEEEEETTEEEEEESS--SSEEEEEETTTCCE
T ss_pred             ceEEEEECCCCcEEEE-----Ee-----------------cCCc-cceeEEEEeCCEEEEEEee--CCEEEEEECccCcE
Confidence            6899999999874321     11                 0111 1122344566644444332  23499999998876


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc--ccCCCeEE--
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP--LTRGRFTV--  359 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~--lt~~~~~~--  359 (790)
                      ..-..... .       ....++||+.|+.  +     +|      ...|+++|.++.+.     ...  ++.+...+  
T Consensus       120 ~~ti~~~~-e-------G~glt~dg~~L~~--S-----dG------s~~i~~iDp~T~~v-----~~~I~V~~~g~~~~~  173 (262)
T 3nol_A          120 VRSFNYDG-E-------GWGLTHNDQYLIM--S-----DG------TPVLRFLDPESLTP-----VRTITVTAHGEELPE  173 (262)
T ss_dssp             EEEEECSS-C-------CCCEEECSSCEEE--C-----CS------SSEEEEECTTTCSE-----EEEEECEETTEECCC
T ss_pred             EEEEECCC-C-------ceEEecCCCEEEE--E-----CC------CCeEEEEcCCCCeE-----EEEEEeccCCccccc
Confidence            54443322 2       3456789998873  3     24      34799999987651     222  22222221  


Q ss_pred             eEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee-c-cccc----CCCcccEEEEEEecCCcEEEEEeec
Q psy463          360 TEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC-D-LLTS----ANQKCSYSGATFSTNVSYYVLSCIG  433 (790)
Q Consensus       360 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~-~-~~~~----~~~~~~~~~~~~s~dg~~~~~~~~~  433 (790)
                      ...+.|. +| .||......    ..|.++|.++  +++..... . +...    .........++++|+++.++.+.  
T Consensus       174 lNELe~~-~G-~lyan~w~~----~~I~vIDp~t--G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG--  243 (262)
T 3nol_A          174 LNELEWV-DG-EIFANVWQT----NKIVRIDPET--GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG--  243 (262)
T ss_dssp             EEEEEEE-TT-EEEEEETTS----SEEEEECTTT--CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE--
T ss_pred             cceeEEE-CC-EEEEEEccC----CeEEEEECCC--CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC--
Confidence            1235676 56 577554332    4899999877  55433221 1 1100    01123567899999998876653  


Q ss_pred             CCCCeEEEEe
Q psy463          434 PGIPEIMLFD  443 (790)
Q Consensus       434 ~~~~~i~~~~  443 (790)
                      ..-|.+|.+.
T Consensus       244 K~Wp~~~ev~  253 (262)
T 3nol_A          244 KLWPKVFEIT  253 (262)
T ss_dssp             TTCSEEEEEE
T ss_pred             CCCCceEEEE
Confidence            3345555443

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=96.63  E-value=0.47  Score=45.16  Aligned_cols=180  Identities=13%  Similarity=0.080  Sum_probs=97.5

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      +.|.++|+++|+..+.   ..+.                 ....   ....+++|..++.....  ...++++|.++.+.
T Consensus        43 S~v~~vD~~tgkv~~~---~~l~-----------------~~~f---geGi~~~~~~ly~ltw~--~~~v~v~D~~tl~~   97 (243)
T 3mbr_X           43 SSVRKVDLETGRILQR---AEVP-----------------PPYF---GAGIVAWRDRLIQLTWR--NHEGFVYDLATLTP   97 (243)
T ss_dssp             CEEEEEETTTCCEEEE---EECC-----------------TTCC---EEEEEEETTEEEEEESS--SSEEEEEETTTTEE
T ss_pred             ceEEEEECCCCCEEEE---EeCC-----------------CCcc---eeEEEEeCCEEEEEEee--CCEEEEEECCcCcE
Confidence            6899999999875321   1111                 1111   12234456633333322  23499999999876


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc--ccCCCeEEe-
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP--LTRGRFTVT-  360 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~--lt~~~~~~~-  360 (790)
                      ..-..... .       ....++||+.|+.  +     +|      ...|+++|.++.+.     .+.  ++.+...+. 
T Consensus        98 ~~ti~~~~-~-------Gwglt~dg~~L~v--S-----dg------s~~l~~iDp~t~~~-----~~~I~V~~~g~~~~~  151 (243)
T 3mbr_X           98 RARFRYPG-E-------GWALTSDDSHLYM--S-----DG------TAVIRKLDPDTLQQ-----VGSIKVTAGGRPLDN  151 (243)
T ss_dssp             EEEEECSS-C-------CCEEEECSSCEEE--E-----CS------SSEEEEECTTTCCE-----EEEEECEETTEECCC
T ss_pred             EEEEeCCC-C-------ceEEeeCCCEEEE--E-----CC------CCeEEEEeCCCCeE-----EEEEEEccCCccccc
Confidence            54444322 2       3456689998873  3     24      34799999887651     222  332222221 


Q ss_pred             -EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee-c-cccc-----CCCcccEEEEEEecCCcEEEEEee
Q psy463          361 -EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC-D-LLTS-----ANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       361 -~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~-~-~~~~-----~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                       ..+.|. +| .||..... .   ..|.++|.++  +++..... . +...     .........++++|+++.+..+  
T Consensus       152 lNeLe~~-~G-~lyanvw~-s---~~I~vIDp~t--G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT--  221 (243)
T 3mbr_X          152 LNELEWV-NG-ELLANVWL-T---SRIARIDPAS--GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT--  221 (243)
T ss_dssp             EEEEEEE-TT-EEEEEETT-T---TEEEEECTTT--CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE--
T ss_pred             ceeeEEe-CC-EEEEEECC-C---CeEEEEECCC--CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE--
Confidence             225564 45 46644433 2   4899999877  55432211 1 1100     0122356789999998877554  


Q ss_pred             cCCCCeEEEEec
Q psy463          433 GPGIPEIMLFDK  444 (790)
Q Consensus       433 ~~~~~~i~~~~~  444 (790)
                      +..-|.+|.+.+
T Consensus       222 GK~wp~~~~v~~  233 (243)
T 3mbr_X          222 GKRWPMLYEIRL  233 (243)
T ss_dssp             ETTCSEEEEEEE
T ss_pred             CCCCCcEEEEEE
Confidence            333566665543

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=96.60  E-value=0.18  Score=51.05  Aligned_cols=173  Identities=12%  Similarity=0.043  Sum_probs=91.4

Q ss_pred             EEEEEEcc-CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEcc-CCCEEEEEEcccc-------
Q psy463          249 LSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS-DGKKMLLILSHNQ-------  319 (790)
Q Consensus       249 ~~~~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-Dg~~i~~~~~~~~-------  319 (790)
                      ...+.+.+ +|+++... ...   .|++++.+++..+.+..... ..-........+.| ||+ |++......       
T Consensus        82 p~gi~~~~~~g~l~v~d-~~~---~i~~~d~~~g~~~~~~~~~~-~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~  155 (322)
T 2fp8_A           82 TYDISYNLQNNQLYIVD-CYY---HLSVVGSEGGHATQLATSVD-GVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQ  155 (322)
T ss_dssp             EEEEEEETTTTEEEEEE-TTT---EEEEECTTCEECEEEESEET-TEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHH
T ss_pred             CceEEEcCCCCcEEEEE-CCC---CEEEEeCCCCEEEEecccCC-CCcccccceEEEecCCCE-EEEECCcccccccccc
Confidence            45677887 67633322 221   28888888776655543221 10011123578899 886 654433100       


Q ss_pred             ----ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCC
Q psy463          320 ----ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPT  395 (790)
Q Consensus       320 ----~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~  395 (790)
                          +...      ...|+++|.++++      ...+..+ ......++|++||+.||+.....    ..|+++++++..
T Consensus       156 ~~~~~~~~------~g~v~~~d~~~~~------~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~----~~I~~~~~~~~~  218 (322)
T 2fp8_A          156 QIMDTSDK------TGRLIKYDPSTKE------TTLLLKE-LHVPGGAEVSADSSFVLVAEFLS----HQIVKYWLEGPK  218 (322)
T ss_dssp             HHHHHTCC------CEEEEEEETTTTE------EEEEEEE-ESCCCEEEECTTSSEEEEEEGGG----TEEEEEESSSTT
T ss_pred             eehcccCC------CceEEEEeCCCCE------EEEeccC-CccCcceEECCCCCEEEEEeCCC----CeEEEEECCCCc
Confidence                0011      2469999987665      4333221 11122278999999888876542    478888887521


Q ss_pred             -CCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC-------CCeEEEEecCCCeEEEe
Q psy463          396 -ATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-------IPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       396 -~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-------~~~i~~~~~~~~~~~~l  452 (790)
                       +..+.+..       ..+ -..+.++++|..++.......       ...|++++.+++.+..+
T Consensus       219 ~~~~~~~~~-------~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~  275 (322)
T 2fp8_A          219 KGTAEVLVK-------IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVI  275 (322)
T ss_dssp             TTCEEEEEE-------CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEE
T ss_pred             CCccceEEe-------CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEE
Confidence             12222221       112 456788899985544433111       23466666655444433

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=96.57  E-value=0.68  Score=45.71  Aligned_cols=154  Identities=10%  Similarity=0.019  Sum_probs=83.2

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      .....+...++|++......   ...|++++.+ ++...+... ...   .....+.+.+||+ |++...    ..    
T Consensus       104 ~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-g~~~~~~~~-~~~---~~~~~i~~d~~g~-l~v~~~----~~----  166 (300)
T 2qc5_A          104 SGPYGITEGLNGDIWFTQLN---GDRIGKLTAD-GTIYEYDLP-NKG---SYPAFITLGSDNA-LWFTEN----QN----  166 (300)
T ss_dssp             CCEEEEEECSTTCEEEEETT---TTEEEEECTT-SCEEEEECS-STT---CCEEEEEECTTSS-EEEEET----TT----
T ss_pred             CCCccceECCCCCEEEEccC---CCeEEEECCC-CCEEEccCC-CCC---CCceeEEECCCCC-EEEEec----CC----
Confidence            34567888899984333221   1248889887 655433211 101   1123677899998 553332    22    


Q ss_pred             cCcccEEEEEEcCCCCcccCCCccccc--CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeec
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLT--RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCD  404 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~  404 (790)
                          ..|++++. +++      ...+.  ........ +.++++|+ ||+.....    ..|++++..   ++...+.. 
T Consensus       167 ----~~i~~~~~-~g~------~~~~~~~~~~~~~~~-i~~d~~g~-l~v~~~~~----~~i~~~~~~---g~~~~~~~-  225 (300)
T 2qc5_A          167 ----NSIGRITN-TGK------LEEYPLPTNAAAPVG-ITSGNDGA-LWFVEIMG----NKIGRITTT---GEISEYDI-  225 (300)
T ss_dssp             ----TEEEEECT-TCC------EEEEECSSTTCCEEE-EEECTTSS-EEEEETTT----TEEEEECTT---CCEEEEEC-
T ss_pred             ----CeEEEECC-CCc------EEEeeCCCCCCCcce-EEECCCCC-EEEEccCC----CEEEEEcCC---CcEEEEEC-
Confidence                36899988 444      33222  11112233 67888885 66665442    368888873   33333221 


Q ss_pred             ccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          405 LLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       405 ~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                          .........+.++++|+.+ ++.  .....|++++.+
T Consensus       226 ----~~~~~~~~~i~~d~~g~l~-v~~--~~~~~i~~~~~~  259 (300)
T 2qc5_A          226 ----PTPNARPHAITAGKNSEIW-FTE--WGANQIGRITND  259 (300)
T ss_dssp             ----SSTTCCEEEEEECSTTCEE-EEE--TTTTEEEEECTT
T ss_pred             ----CCCCCCceEEEECCCCCEE-Eec--cCCCeEEEECCC
Confidence                0123345678888998743 332  123457777763

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=96.47  E-value=0.62  Score=44.78  Aligned_cols=162  Identities=9%  Similarity=0.055  Sum_probs=90.0

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      .+...+.++ ||. ++.+....+...|..+|+++|+...-...+  ..    ...-..+++|+.|+.+.-    .++   
T Consensus        43 ~ftqGL~~~-~~~-LyestG~~g~S~v~~vD~~Tgkv~~~~~l~--~~----~FgeGit~~g~~ly~ltw----~~~---  107 (262)
T 3nol_A           43 AFTEGFFYR-NGY-FYESTGLNGRSSIRKVDIESGKTLQQIELG--KR----YFGEGISDWKDKIVGLTW----KNG---  107 (262)
T ss_dssp             CEEEEEEEE-TTE-EEEEEEETTEEEEEEECTTTCCEEEEEECC--TT----CCEEEEEEETTEEEEEES----SSS---
T ss_pred             cccceEEEE-CCE-EEEECCCCCCceEEEEECCCCcEEEEEecC--Cc----cceeEEEEeCCEEEEEEe----eCC---
Confidence            344567787 664 333333334566999999999875444322  11    112346678888885432    334   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecc
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDL  405 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~  405 (790)
                           .++++|.++.+     ....+..+.   .+ ...++|++.||.+ + +.   ..|+.+|.++  .+. ..+.-. 
T Consensus       108 -----~v~v~D~~t~~-----~~~ti~~~~---eG-~glt~dg~~L~~S-d-Gs---~~i~~iDp~T--~~v~~~I~V~-  165 (262)
T 3nol_A          108 -----LGFVWNIRNLR-----QVRSFNYDG---EG-WGLTHNDQYLIMS-D-GT---PVLRFLDPES--LTPVRTITVT-  165 (262)
T ss_dssp             -----EEEEEETTTCC-----EEEEEECSS---CC-CCEEECSSCEEEC-C-SS---SEEEEECTTT--CSEEEEEECE-
T ss_pred             -----EEEEEECccCc-----EEEEEECCC---Cc-eEEecCCCEEEEE-C-CC---CeEEEEcCCC--CeEEEEEEec-
Confidence                 79999998776     133343222   11 2345678876665 3 23   5799998876  332 222210 


Q ss_pred             cccCCCc-ccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEE
Q psy463          406 LTSANQK-CSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLY  451 (790)
Q Consensus       406 ~~~~~~~-~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~  451 (790)
                        ..+.. ...+.+.+. +|+ ++...  ...+.|.++|.+++++..
T Consensus       166 --~~g~~~~~lNELe~~-~G~-lyan~--w~~~~I~vIDp~tG~V~~  206 (262)
T 3nol_A          166 --AHGEELPELNELEWV-DGE-IFANV--WQTNKIVRIDPETGKVTG  206 (262)
T ss_dssp             --ETTEECCCEEEEEEE-TTE-EEEEE--TTSSEEEEECTTTCBEEE
T ss_pred             --cCCccccccceeEEE-CCE-EEEEE--ccCCeEEEEECCCCcEEE
Confidence              00001 223345565 675 33322  224589999998876644

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=96.45  E-value=0.89  Score=45.78  Aligned_cols=121  Identities=8%  Similarity=0.004  Sum_probs=68.9

Q ss_pred             EEEEEEcc-CCc-EEEEEec-------------cCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEE
Q psy463          249 LSRVNWAN-ESV-VAAWVNR-------------VQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLL  313 (790)
Q Consensus       249 ~~~~~wsp-Dg~-~~~~~~r-------------~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~  313 (790)
                      ...+.+.| ||+ ++.-...             ......|++++.++++.+.+.....      ....+.|+|||+.|++
T Consensus       128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~------~p~gia~~~dg~~lyv  201 (322)
T 2fp8_A          128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH------VPGGAEVSADSSFVLV  201 (322)
T ss_dssp             EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES------CCCEEEECTTSSEEEE
T ss_pred             cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc------cCcceEECCCCCEEEE
Confidence            45688999 998 3332211             0123569999998887765543321      1346899999998874


Q ss_pred             EEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCC-C-----CceEEEE
Q psy463          314 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQG-S-----PIVQHMY  387 (790)
Q Consensus       314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~-~-----~~~~~l~  387 (790)
                      .-.      +      ...|+++++++...   ...+.+..... ..+ +..+++|+ ||+..... .     +....|+
T Consensus       202 ~d~------~------~~~I~~~~~~~~~~---~~~~~~~~~~g-P~g-i~~d~~G~-l~va~~~~~~~~~~~~~~~~v~  263 (322)
T 2fp8_A          202 AEF------L------SHQIVKYWLEGPKK---GTAEVLVKIPN-PGN-IKRNADGH-FWVSSSEELDGNMHGRVDPKGI  263 (322)
T ss_dssp             EEG------G------GTEEEEEESSSTTT---TCEEEEEECSS-EEE-EEECTTSC-EEEEEEEETTSSTTSCEEEEEE
T ss_pred             EeC------C------CCeEEEEECCCCcC---CccceEEeCCC-CCC-eEECCCCC-EEEEecCcccccccCCCccEEE
Confidence            333      2      34799999875320   00122211111 233 67889987 66654330 0     1125688


Q ss_pred             EEEcCC
Q psy463          388 RINIAD  393 (790)
Q Consensus       388 ~~~~~~  393 (790)
                      +++.++
T Consensus       264 ~~d~~G  269 (322)
T 2fp8_A          264 KFDEFG  269 (322)
T ss_dssp             EECTTS
T ss_pred             EECCCC
Confidence            887654

>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*

Probab=96.44  E-value=0.016  Score=62.03  Aligned_cols=114  Identities=12%  Similarity=0.156  Sum_probs=71.7

Q ss_pred             CccEEEEEcCCCCcccccccc-ccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc--cCC----ccchhHHHHHHH
Q psy463          500 KYPLLIHVYGGPSSFQVTERF-SVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR--RLG----TVEIYDQINVTR  572 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~-~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~--~~~----~~~~~D~~~~~~  572 (790)
                      +.|+++++-| -+...  ... ...+...++.+.|-.++....|--|.+ .++......  ++.    .+.+.|++..++
T Consensus        42 ~gPIfl~~gG-Eg~~~--~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S-~P~~~~st~~~nL~yLt~eQALaD~a~fi~  117 (472)
T 4ebb_A           42 EGPIFFYTGN-EGDVW--AFANNSAFVAELAAERGALLVFAEHRYYGKS-LPFGAQSTQRGHTELLTVEQALADFAELLR  117 (472)
T ss_dssp             TCCEEEEECC-SSCHH--HHHHHCHHHHHHHHHHTCEEEEECCTTSTTC-CTTGGGGGSTTSCTTCSHHHHHHHHHHHHH
T ss_pred             CCcEEEEECC-Ccccc--ccccCccHHHHHHHHhCCeEEEEecccccCC-cCCCCCCccccccccCCHHHHHHHHHHHHH
Confidence            3588877744 33211  101 112444566667889999999964332 112111111  121    245788888888


Q ss_pred             HHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          573 YLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       573 ~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      .+...+. ....+++++|.||||.+|+++-.++|. .+.++++.+++
T Consensus       118 ~~k~~~~-~~~~pwI~~GGSY~G~LaAW~R~kYP~-lv~ga~ASSAp  162 (472)
T 4ebb_A          118 ALRRDLG-AQDAPAIAFGGSYGGMLSAYLRMKYPH-LVAGALAASAP  162 (472)
T ss_dssp             HHHHHTT-CTTCCEEEEEETHHHHHHHHHHHHCTT-TCSEEEEETCC
T ss_pred             HHHhhcC-CCCCCEEEEccCccchhhHHHHhhCCC-eEEEEEecccc
Confidence            8877554 445799999999999999999999997 66666655544

>1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A*

Probab=96.39  E-value=0.015  Score=60.73  Aligned_cols=137  Identities=17%  Similarity=0.108  Sum_probs=79.7

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc---c---c------hHHHHHhcCCeEEEEEcC-CCCC
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS---V---D------WNLYLADNKDIVVAYIDG-RNSA  545 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~---~---~------~~~~~~~~~G~~v~~~d~-rG~~  545 (790)
                      .+..+.++.+...+    .....|++++++||||...+...+.   +   .      ....-.. +-..++.+|. .|+|
T Consensus        26 ~~~~lfy~f~~s~~----~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~-~~an~lfiDqPvGtG  100 (421)
T 1cpy_A           26 EDKHFFFWTFESRN----DPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWN-SNATVIFLDQPVNVG  100 (421)
T ss_dssp             TTEEEEEEEECCSS----CTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGG-GGSEEECCCCSTTST
T ss_pred             CCcEEEEEEEEeCC----CCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccc-cccCEEEecCCCccc
Confidence            46778888776543    2356799999999999754311110   0   0      0000011 2346888884 4655


Q ss_pred             CChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCC--CceEEEEechHHHHHHHHHhcCC-----CCceEEEEEeCC
Q psy463          546 LKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDK--TRTAIWGWSYGGYATGLALALDP-----SNVFKCGISVAP  618 (790)
Q Consensus       546 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~--~ri~i~G~S~GG~~a~~~a~~~p-----~~~~~~~v~~~~  618 (790)
                      .+-..   .....-......|+...++...+.++....  .++.|+|.||||..+..++..--     .-.+++++.+.|
T Consensus       101 fSy~~---~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg  177 (421)
T 1cpy_A          101 FSYSG---SSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNG  177 (421)
T ss_dssp             TCEES---SCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESC
T ss_pred             ccCCC---CCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCc
Confidence            42111   110000112355666666655555777666  79999999999998766553211     125778899999


Q ss_pred             CCCcc
Q psy463          619 VTDWI  623 (790)
Q Consensus       619 ~~~~~  623 (790)
                      +++..
T Consensus       178 ~~dp~  182 (421)
T 1cpy_A          178 LTDPL  182 (421)
T ss_dssp             CCCHH
T ss_pred             ccChh
Confidence            88754

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=96.38  E-value=0.14  Score=52.53  Aligned_cols=180  Identities=12%  Similarity=0.081  Sum_probs=92.8

Q ss_pred             CEEEEEEEccCCcEEEEEeccC---cceEEEEEECCCCceeEEEEEeCCCc-ccccCCceeEccCCCEEEEEEccccccC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQ---NRARITRCSINEGTCDVVFSRDLDRG-WFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~---~~~~i~~~~~~~g~~~~l~~~~~~~~-~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      .....+.++|||++.. ++.+.   ....|+++|+++++............ -.......+++|++..+++.-+   ...
T Consensus        67 ~~p~gv~~d~~g~L~v-~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~---~~~  142 (343)
T 2qe8_A           67 DTVLGIKSDGNGIVWM-LDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP---APD  142 (343)
T ss_dssp             SCEEEEEECSSSEEEE-EECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC---CSG
T ss_pred             eEeeEEEEcCCCcEEE-EcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcC---ccC
Confidence            3467889999998322 22211   12459999999987544333211100 0011357889988776664322   001


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCccc-ccC--------------CC-------------e-EEeEEEeeecCCCEEE
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVP-LTR--------------GR-------------F-TVTEILAWDEKENNVY  373 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~-lt~--------------~~-------------~-~~~~~~~~s~dg~~l~  373 (790)
                      +      ...|+++|+++++      ..+ +..              +.             + .....++|||||+.||
T Consensus       143 ~------~~~i~v~d~~~g~------~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly  210 (343)
T 2qe8_A          143 D------KAALIRVDLQTGL------AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLY  210 (343)
T ss_dssp             G------GCEEEEEETTTCC------EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEE
T ss_pred             C------CCeEEEEECCCCC------EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEE
Confidence            2      3478999987665      222 110              00             0 0112378999999999


Q ss_pred             EEEcCCCCceEEEEEEEcCCC-CCC--cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          374 FLSTQGSPIVQHMYRINIADP-TAT--PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       374 ~~~~~~~~~~~~l~~~~~~~~-~~~--~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                      +....+    .+||+++.... .+.  ...+...+. ..+.......+.++++|..++...   ....|.+++.++++..
T Consensus       211 ~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~pdgia~d~~G~l~va~~---~~~~V~~~d~~~G~~~  282 (343)
T 2qe8_A          211 LSPMHS----TSMYRIKSADLSNLQLTDAELGSKIE-RYSEKPICDGISIDKDHNIYVGDL---AHSAIGVITSADRAYK  282 (343)
T ss_dssp             EEESSC----SEEEEEEHHHHTCTTCCHHHHHTTCE-EEEECCSCSCEEECTTCCEEEEEG---GGTEEEEEETTTTEEE
T ss_pred             EEeCCC----CeEEEEEHHHhcCCCCChhhhhcceE-ecccCCCCceEEECCCCCEEEEcc---CCCeEEEEECCCCCEE
Confidence            987654    48999875210 011  000000000 000111223477888886544322   2346888887334443

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=96.35  E-value=0.8  Score=44.13  Aligned_cols=202  Identities=16%  Similarity=0.219  Sum_probs=107.9

Q ss_pred             CEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          247 PVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       247 ~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ..++.++|.||+. +.+..+.   ...|+.+|+. |+..+-....   ++.+ ...+++.++|. ++ ++.   +..+  
T Consensus        27 ~~lSGla~~~~~~~L~aV~d~---~~~I~~ld~~-g~v~~~i~l~---g~~D-~EGIa~~~~g~-~~-vs~---E~~~--   91 (255)
T 3qqz_A           27 NNISSLTWSAQSNTLFSTINK---PAAIVEMTTN-GDLIRTIPLD---FVKD-LETIEYIGDNQ-FV-ISD---ERDY--   91 (255)
T ss_dssp             SCEEEEEEETTTTEEEEEEET---TEEEEEEETT-CCEEEEEECS---SCSS-EEEEEECSTTE-EE-EEE---TTTT--
T ss_pred             cCcceeEEeCCCCEEEEEECC---CCeEEEEeCC-CCEEEEEecC---CCCC-hHHeEEeCCCE-EE-EEE---CCCC--
Confidence            4578899999987 4444444   3459999998 5443222211   1111 44788888885 44 344   3333  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcc--cc--cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc--CCCCCCcc
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPV--PL--TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI--ADPTATPE  399 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~--~l--t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~--~~~~~~~~  399 (790)
                            .|+++++............  .+  ........+ ++|+|++++||....+. |  ..||.++-  .+  ...+
T Consensus        92 ------~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EG-LA~d~~~~~L~va~E~~-p--~~i~~~~g~~~~--~~l~  159 (255)
T 3qqz_A           92 ------AIYVISLTPNSEVKILKKIKIPLQESPTNCGFEG-LAYSRQDHTFWFFKEKN-P--IEVYKVNGLLSS--NELH  159 (255)
T ss_dssp             ------EEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEE-EEEETTTTEEEEEEESS-S--EEEEEEESTTCS--SCCE
T ss_pred             ------cEEEEEcCCCCeeeeeeeeccccccccccCCcce-EEEeCCCCEEEEEECcC-C--ceEEEEcccccC--Ccee
Confidence                  6888776543210000001  11  112223344 89999999998866554 3  68999872  11  1111


Q ss_pred             eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEcCC
Q psy463          400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQP  479 (790)
Q Consensus       400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d  479 (790)
                      .+..............+.+++.|....+++..+  ....|..+|.+++....+...+...  -....++++|-+++.. +
T Consensus       160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~--~s~~L~~~d~~g~~~~~~~L~~g~~--~l~~~~~qpEGia~d~-~  234 (255)
T 3qqz_A          160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSH--ESRALQEVTLVGEVIGEMSLTKGSR--GLSHNIKQAEGVAMDA-S  234 (255)
T ss_dssp             EEECHHHHHTCCSSCCCEEEEETTTTEEEEEET--TTTEEEEECTTCCEEEEEECSTTGG--GCSSCCCSEEEEEECT-T
T ss_pred             eecchhhccccccCCceeEEEcCCCCeEEEEEC--CCCeEEEEcCCCCEEEEEEcCCccC--CcccccCCCCeeEECC-C
Confidence            111100000002235677888888665544432  2367888898887444443332110  0122467888888865 4


Q ss_pred             C
Q psy463          480 N  480 (790)
Q Consensus       480 g  480 (790)
                      |
T Consensus       235 G  235 (255)
T 3qqz_A          235 G  235 (255)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=96.30  E-value=0.14  Score=49.29  Aligned_cols=190  Identities=13%  Similarity=0.053  Sum_probs=102.1

Q ss_pred             eeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCc
Q psy463           74 AWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQ  153 (790)
Q Consensus        74 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~  153 (790)
                      +|....+... ++..+..+++...-. .+..  .+    .--.+++|++|+...-..            +.++++|.++.
T Consensus        67 Ly~stG~~g~-v~~iD~~Tgkv~~~~-l~~~--~F----geGit~~g~~Ly~ltw~~------------~~v~V~D~~Tl  126 (268)
T 3nok_A           67 FFESTGHQGT-LRQLSLESAQPVWME-RLGN--IF----AEGLASDGERLYQLTWTE------------GLLFTWSGMPP  126 (268)
T ss_dssp             EEEEETTTTE-EEECCSSCSSCSEEE-ECTT--CC----EEEEEECSSCEEEEESSS------------CEEEEEETTTT
T ss_pred             EEEEcCCCCE-EEEEECCCCcEEeEE-CCCC--cc----eeEEEEeCCEEEEEEccC------------CEEEEEECCcC
Confidence            4444444434 777888877655433 2211  11    002467888887765322            28999999877


Q ss_pred             CCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCcccccccccee
Q psy463          154 AGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT  233 (790)
Q Consensus       154 ~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~  233 (790)
                      +     +..++.-+..    -++...+++  .+|.+. . .         ..|+.+|.++.+..+-   .+++...    
T Consensus       127 ~-----~~~ti~~~~e----GwGLt~Dg~--~L~vSd-G-s---------~~l~~iDp~T~~v~~~---I~V~~~g----  177 (268)
T 3nok_A          127 Q-----RERTTRYSGE----GWGLCYWNG--KLVRSD-G-G---------TMLTFHEPDGFALVGA---VQVKLRG----  177 (268)
T ss_dssp             E-----EEEEEECSSC----CCCEEEETT--EEEEEC-S-S---------SEEEEECTTTCCEEEE---EECEETT----
T ss_pred             c-----EEEEEeCCCc----eeEEecCCC--EEEEEC-C-C---------CEEEEEcCCCCeEEEE---EEeCCCC----
Confidence            4     2333322210    122233343  566654 1 2         6899999888653221   1221000    


Q ss_pred             ehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeC--------CCcccccCCceeEc
Q psy463          234 EILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDL--------DRGWFEPFDHLRFS  305 (790)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~--------~~~~~~~~~~~~~s  305 (790)
                                ..-..+..+.|. ||++.+-. .  ....|.++|+++|++.....-.+        ...-.+.-..++|+
T Consensus       178 ----------~~v~~lNeLe~~-dG~lyanv-w--~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~d  243 (268)
T 3nok_A          178 ----------QPVELINELECA-NGVIYANI-W--HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVE  243 (268)
T ss_dssp             ----------EECCCEEEEEEE-TTEEEEEE-T--TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEEC
T ss_pred             ----------cccccccccEEe-CCEEEEEE-C--CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEc
Confidence                      011234567777 88732222 1  12359999999998865554320        00001123479999


Q ss_pred             cCCCEEEEEEccccccCCCCCcCcccEEEEEEc
Q psy463          306 SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL  338 (790)
Q Consensus       306 pDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~  338 (790)
                      |+++.|+++.-      -      |..||.+.+
T Consensus       244 p~~~rlfVTGK------~------Wp~~~ev~~  264 (268)
T 3nok_A          244 PGSGRIFMTGK------L------WPRLFEVRL  264 (268)
T ss_dssp             TTTCCEEEEET------T------CSEEEEEEE
T ss_pred             CCCCEEEEeCC------C------CCceEEEEE
Confidence            99999885332      2      778887754

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=96.30  E-value=1.2  Score=45.42  Aligned_cols=242  Identities=12%  Similarity=0.102  Sum_probs=0.0

Q ss_pred             ccccCCceEEEEee-------------cCCCCCCCCCCcCCcEEEEEEcC--CcCCccCCcceeccc-----cceEEEEE
Q psy463          115 RFSSDGKKMLLILS-------------HNQESDGSTPVDSWDHLTFIDLD--DQAGIKDKVPVPLTR-----GRFTVTEI  174 (790)
Q Consensus       115 ~~spdg~~i~~~~~-------------~~~~~~~~~~~g~~~~l~~~~~~--~~~~~~~~~~~~lt~-----~~~~~~~~  174 (790)
                      ...|+|  ++|++.             ..+            +|+++|++  +.+    ...-.++.     ..+....+
T Consensus        56 ~~~~~G--~~~~s~~~~~pg~~~~~~~~~G------------~I~~~d~~~~~~~----~~~l~~~g~~~~~~~f~PhGi  117 (355)
T 3sre_A           56 EILPNG--LAFISSGLKYPGIMSFDPDKSG------------KILLMDLNEKEPA----VSELEIIGNTLDISSFNPHGI  117 (355)
T ss_dssp             EECTTS--EEEEEECCC-----------CC------------EEEEEETTSSSCC----EEECEEECSSCCGGGCCEEEE
T ss_pred             EEcCCC--eEEEEeccccCCCcccCCCCCC------------eEEEEecCCCCCc----eEEEEccCCCCCcCceeeeee


Q ss_pred             EeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEE
Q psy463          175 LAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNW  254 (790)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~w  254 (790)
                      -.+....+...+|+..........      +||.++.+++...-+  ..--.                 ..-.....+..
T Consensus       118 ~~~~d~dg~~~L~Vvnh~~~~s~i------elf~~d~~~~~~~~~--~~~~g-----------------~~~~~pND~~v  172 (355)
T 3sre_A          118 STFIDDDNTVYLLVVNHPGSSSTV------EVFKFQEEEKSLLHL--KTIRH-----------------KLLPSVNDIVA  172 (355)
T ss_dssp             EEEECTTCCEEEEEEECSTTCCEE------EEEEEETTTTEEEEE--EEECC-----------------TTCSSEEEEEE
T ss_pred             EEEECCCCcEEEEEEECCCCCCeE------EEEEEECCCCEEEEE--ecccc-----------------CCCCCCceEEE


Q ss_pred             ccCCcEEEEEe--------------ccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccc
Q psy463          255 ANESVVAAWVN--------------RVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQE  320 (790)
Q Consensus       255 spDg~~~~~~~--------------r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~  320 (790)
                      .+||++.+...              .......+|.++.  ++++.+...-..      ...++|||||+.+++.-+    
T Consensus       173 ~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~------pNGia~spDg~~lYvadt----  240 (355)
T 3sre_A          173 VGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDF------ANGINISPDGKYVYIAEL----  240 (355)
T ss_dssp             EETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESS------EEEEEECTTSSEEEEEEG----
T ss_pred             eCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcc------cCcceECCCCCEEEEEeC----


Q ss_pred             cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeec-CCCEEEEEEcCC-------CCc---eEEEEEE
Q psy463          321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE-KENNVYFLSTQG-------SPI---VQHMYRI  389 (790)
Q Consensus       321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~-dg~~l~~~~~~~-------~~~---~~~l~~~  389 (790)
                      ..+        .|++++++......   .+.+-.-.....+ ++.++ +|+ |+..+..+       +|.   ...+.++
T Consensus       241 ~~~--------~I~~~~~~~~g~l~---~~~~~~~~g~PDG-i~vD~e~G~-lwva~~~~g~~v~~~~P~~~~~s~v~rI  307 (355)
T 3sre_A          241 LAH--------KIHVYEKHANWTLT---PLRVLSFDTLVDN-ISVDPVTGD-LWVGCHPNGMRIFFYDAENPPGSEVLRI  307 (355)
T ss_dssp             GGT--------EEEEEEECTTSCEE---EEEEEECSSEEEE-EEECTTTCC-EEEEEESCHHHHHSCCTTSCCCEEEEEE
T ss_pred             CCC--------eEEEEEECCCCcEe---cCEEEeCCCCCce-EEEeCCCCc-EEEEecCCceEEEEECCCCCCCCEEEEE


Q ss_pred             EcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEEE
Q psy463          390 NIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIML  441 (790)
Q Consensus       390 ~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~  441 (790)
                      ....                 +......-.+..||+.+-.+..... -..+++
T Consensus       308 ~~~~-----------------~~~~~v~~v~~ddG~~l~~~T~a~~~~g~L~i  343 (355)
T 3sre_A          308 QDIL-----------------SEEPKVTVVYAENGTVLQGSTVAAVYKGKLLI  343 (355)
T ss_dssp             ECTT-----------------SSSCEEEEEEEECSSSCCSEEEEEEETTEEEE
T ss_pred             EccC-----------------CCCcEEEEEEEcCCCEEEeeEEEEEECCEEEE

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=96.29  E-value=0.14  Score=54.63  Aligned_cols=124  Identities=10%  Similarity=0.077  Sum_probs=71.2

Q ss_pred             EEEEEEE-------ccCCcEEEEEeccC----cceEEEEEECCC-Ccee-----EEEEEeCCCcccccCCceeEccCCCE
Q psy463          248 VLSRVNW-------ANESVVAAWVNRVQ----NRARITRCSINE-GTCD-----VVFSRDLDRGWFEPFDHLRFSSDGKK  310 (790)
Q Consensus       248 ~~~~~~w-------spDg~~~~~~~r~~----~~~~i~~~~~~~-g~~~-----~l~~~~~~~~~~~~~~~~~~spDg~~  310 (790)
                      ....++|       ++||+.++.++...    ....++.++.+. |...     .....     +.+ ...++.+|+++.
T Consensus       187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-----~~~-p~giavdp~~g~  260 (496)
T 3kya_A          187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-----YKQ-CNGATIHPINGE  260 (496)
T ss_dssp             BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-----ESC-CCCEEECTTTCC
T ss_pred             CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-----CCC-ceEEEEcCCCCe
Confidence            4577899       99999666665543    234578887554 3332     22221     111 347889998888


Q ss_pred             EEEEEccccccCCCCCcCcccEEEEEEcC-------CCCcccCC-C-----ccc-ccCCCeEEeEEEeeecCCCEEEEEE
Q psy463          311 MLLILSHNQESDGSTPVDSWDHLTFIDLD-------DQAGIKDK-V-----PVP-LTRGRFTVTEILAWDEKENNVYFLS  376 (790)
Q Consensus       311 i~~~~~~~~~~~g~~~~~~~~~l~~~d~~-------~~~~~~~~-~-----~~~-lt~~~~~~~~~~~~s~dg~~l~~~~  376 (790)
                      |++...    ..+        .|+++|++       +++..... .     ... .+.+.......++|+|+|+.||+.-
T Consensus       261 LYvtd~----~~g--------~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD  328 (496)
T 3kya_A          261 LYFNSY----EKG--------QVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV  328 (496)
T ss_dssp             EEEEET----TTT--------EEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred             EEEEEC----CCC--------EEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence            885443    333        79999987       55400000 0     001 1111111112388999999888876


Q ss_pred             cCCCCceEEEEEEEcCC
Q psy463          377 TQGSPIVQHMYRINIAD  393 (790)
Q Consensus       377 ~~~~~~~~~l~~~~~~~  393 (790)
                      ...    ..|++++.++
T Consensus       329 ~~~----h~I~kid~dg  341 (496)
T 3kya_A          329 INN----HYFMRSDYDE  341 (496)
T ss_dssp             TTT----TEEEEEEEET
T ss_pred             CCC----CEEEEEecCC
Confidence            554    4788877654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	790
d1xfda1	465	b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-lik	1e-31
d1xfda1	465	b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-lik	4e-11
d1xfda2	258	c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-li	1e-26
d1xfda2	258	c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-li	8e-11
d2bgra2	258	c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26	3e-21
d2bgra2	258	c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26	2e-08
d2bgra1	470	b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,	9e-18
d2gzsa1	265	c.69.1.38 (A:41-305) Enterobactin and salmochelin	1e-14
d2gzsa1	265	c.69.1.38 (A:41-305) Enterobactin and salmochelin	7e-06
d2d81a1	318	c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer	7e-14
d2d81a1	318	c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer	0.003
d1mpxa2	381	c.69.1.21 (A:24-404) Alpha-amino acid ester hydrol	1e-10
d2b9va2	385	c.69.1.21 (A:50-434) Alpha-amino acid ester hydrol	2e-10
d1sfra_	288	c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculo	4e-09
d2jbwa1	360	c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h	1e-08
d2jbwa1	360	c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h	3e-04
d1wb4a1	273	c.69.1.2 (A:803-1075) Feruloyl esterase domain of	2e-08
d1qfma2	280	c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-term	3e-08
d1lnsa3	405	c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep	4e-07
d3c8da2	246	c.69.1.2 (A:151-396) Enterochelin esterase, cataly	5e-07
d1vlqa_	322	c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm	7e-07
d1dqza_	280	c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculo	7e-07
d1jjfa_	255	c.69.1.2 (A:) Feruloyl esterase domain of the cell	1e-06
d1r88a_	267	c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tu	2e-05
d1l7aa_	318	c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill	9e-05
d1l7aa_	318	c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill	0.001
d1ufoa_	238	c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu	2e-04
d2hu7a2	260	c.69.1.33 (A:322-581) Acylamino-acid-releasing enz	7e-04
d2hu7a2	260	c.69.1.33 (A:322-581) Acylamino-acid-releasing enz	0.002
d1thta_	302	c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase	0.004

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 465

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (318), Expect = 1e-31
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 16/240 (6%)

Query: 231 TVTEILAWDEKENNVEPVLSRVNWANES-VVAAWVNRVQNRARITRCSINEGTCDVVFSR 289
           T    +   +     E  ++ V WA  + V   W+NR QN + +T C    G C      
Sbjct: 239 THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED 298

Query: 290 DLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD-KV 348
           + +       +   FS DG+K   I +  Q                I +           
Sbjct: 299 ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ--------GGRGKFYHITVSSSQPNSSNDN 350

Query: 349 PVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTS 408
              +T G + VT+ILA+DEK N +YFLST+  P  + +Y  N        +C++CDL   
Sbjct: 351 IQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT-VGNFNRQCLSCDL--- 406

Query: 409 ANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNITL 467
             + C+Y  A+FS ++ +++L C GPG+P + + +    +++   +TNE ++ A+ +  +
Sbjct: 407 -VENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLETNEHVKKAINDRQM 465

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 465

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (153), Expect = 4e-11
 Identities = 52/212 (24%), Positives = 80/212 (37%), Gaps = 41/212 (19%)

Query: 4   EEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIP-------------FYGNPGHPSSQY 50
           EE+L +  A W+SP G  LAYA+ +D+R  IM +P              Y   G  +   
Sbjct: 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSI 228

Query: 51  TQAIN------------------LREPVLSRVNWANES-VVAAWVNRVQNRARITRCSIN 91
           +  +                   +RE  ++ V WA  + V   W+NR QN + +T C   
Sbjct: 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT 288

Query: 92  EGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLD 151
            G C      + +       +   FS DG+K   I +  Q                I + 
Sbjct: 289 TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ--------GGRGKFYHITVS 340

Query: 152 DQAGIKD-KVPVPLTRGRFTVTEILAWDEREN 182
                        +T G + VT+ILA+DE+ N
Sbjct: 341 SSQPNSSNDNIQSITSGDWDVTKILAYDEKGN 372

>d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: DPP6 catalytic domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 1e-26
 Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 9/236 (3%)

Query: 468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLY 527
           P VEY  + I  +    +++  P     +    YPLL+ V G P S  V E+F V W   
Sbjct: 1   PKVEYRDIEID-DYNLPMQILKPATFTDT--THYPLLLVVDGTPGSQSVAEKFEVSWETV 57

Query: 528 LADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTA 587
           +  +   VV   DGR S  +G  L +   RR   +                 YID+TR A
Sbjct: 58  MVSSHGAVVVKCDGRGSGFQGTKLLHEVRRR-LGLLEEKDQMEAVRTMLKEQYIDRTRVA 116

Query: 588 IWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLE 644
           ++G  YGGY +   L          F CG +++P+TD+  Y + +SERY+       +  
Sbjct: 117 VFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYL--GLHGLDNR 174

Query: 645 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMG 700
            Y++  + ++V  + ++Q+L++H T D+ +HFQ +  L   L      +  Q Y  
Sbjct: 175 AYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPD 230

>d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: DPP6 catalytic domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (147), Expect = 8e-11
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 3/129 (2%)

Query: 663 YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDR 722
           Y+L     +    F     L+  +    +   +     L     +   Y++  + ++V  
Sbjct: 129 YILPAKGENQGQTFTCGSALS-PITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSA 187

Query: 723 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHT 780
           + ++Q+L++H T D+ +HFQ +  L   L      +  Q YPDE H      ++ H Y +
Sbjct: 188 LEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRS 247

Query: 781 LERFLDSCF 789
           +  F   CF
Sbjct: 248 IINFFVECF 256

>d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 258

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: DPP6 catalytic domain-like
domain: Dipeptidyl peptidase IV/CD26, C-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 91.8 bits (226), Expect = 3e-21
 Identities = 91/215 (42%), Positives = 129/215 (60%), Gaps = 4/215 (1%)

Query: 486 KLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSA 545
           ++ LPP  D S  KKYPLL+ VY GP S +    F ++W  YLA  ++I+VA  DGR S 
Sbjct: 19  QMILPPHFDKS--KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSG 76

Query: 546 LKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD 605
            +G+ + +A  RRLGT E+ DQI   R   +     +K          G   +   +   
Sbjct: 77  YQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSM--VLGS 134

Query: 606 PSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLL 665
            S VFKCGI+VAPV+ W YYD++Y+ERYMGLPT EDNL+ Y+ + + ++ +  +  +YLL
Sbjct: 135 GSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLL 194

Query: 666 VHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMG 700
           +HGT DDNVHFQQS  ++K+L    + FQ+  Y  
Sbjct: 195 IHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTD 229

>d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 258

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: DPP6 catalytic domain-like
domain: Dipeptidyl peptidase IV/CD26, C-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 54.1 bits (128), Expect = 2e-08
 Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 667 HGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDK 726
                  V      +   S         ++RYMGLPT EDNL+ Y+ + + ++ +  +  
Sbjct: 131 VLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQV 190

Query: 727 QYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERF 784
           +YLL+HGT DDNVHFQQS  ++K+L    + FQ+  Y DE+HG+       H Y  +  F
Sbjct: 191 EYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHF 250

Query: 785 LDSCFA 790
           +  CF+
Sbjct: 251 IKQCFS 256

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 470

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 84.8 bits (208), Expect = 9e-18
 Identities = 52/293 (17%), Positives = 101/293 (34%), Gaps = 17/293 (5%)

Query: 177 WDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL 236
           +++ E   +    ++ ES          +     ++            L+      +  +
Sbjct: 190 FNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249

Query: 237 AWDEKENNVEPVLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGW 295
                    +  L  V WA  E +   W+ R+QN + +  C  +E +             
Sbjct: 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE 309

Query: 296 FEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG 355
                 +      +     L  N      +  + + H+ +        I  K    +T+G
Sbjct: 310 MSTTGWVGRFRPSEPHFT-LDGNSFYKIISNEEGYRHICYFQ------IDKKDCTFITKG 362

Query: 356 RFTVTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADPTATPECITCDLLTSANQKC 413
            + V  I A     + +Y++S +  G P  +++Y+I +        C++C+L      +C
Sbjct: 363 TWEVIGIEALTS--DYLYYISNEYKGMPGGRNLYKIQL-SDYTKVTCLSCELNPE---RC 416

Query: 414 SYSGATFSTNVSYYVLSCIGPGIPEIMLFD-KTGQRLLYWDTNEDLRTALTNI 465
            Y   +FS    YY L C GPG+P   L      + L   + N  L   L N+
Sbjct: 417 QYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNV 469

>d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} Length = 265

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: IroE-like
domain: Enterobactin and salmochelin hydrolase IroE
species: Escherichia coli [TaxId: 562]

 Score = 72.7 bits (177), Expect = 1e-14
 Identities = 28/240 (11%), Positives = 61/240 (25%), Gaps = 38/240 (15%)

Query: 480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYI 539
               +V   +P     +    YP+L  + G     ++ +         L++    V+  +
Sbjct: 24  TRHYRVWTAVPNTTAPA--SGYPILYMLDGNAVMDRLDDE----LLKQLSEKTPPVIVAV 77

Query: 540 DGRNSALKGNTLKY-----------------AGYRRLGTVEIYDQINVTRYLQ--ENLPY 580
             + +       +                     R+ G    + Q+  TR     E    
Sbjct: 78  GYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLN 137

Query: 581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFE 640
           ID+ R  +WG SYGG     +        F+   S +P     Y   +     +      
Sbjct: 138 IDRQRRGLWGHSYGGLFVLDSWLSSS--YFRSYYSASPSLGRGYDALLSRVTAV------ 189

Query: 641 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMG 700
                  +      +  +        +          +       L+   +      +  
Sbjct: 190 -----EPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPN 244

>d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} Length = 265

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: IroE-like
domain: Enterobactin and salmochelin hydrolase IroE
species: Escherichia coli [TaxId: 562]

 Score = 46.1 bits (108), Expect = 7e-06
 Identities = 6/56 (10%), Positives = 13/56 (23%), Gaps = 1/56 (1%)

Query: 729 LLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERF 784
              +          +       L+   +      +P+  HG +     F   L   
Sbjct: 208 QGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPM-FNASFRQALLDI 262

>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PHB depolymerase-like
domain: Polyhydroxybutyrate depolymerase
species: Penicillium funiculosum [TaxId: 28572]

 Score = 71.2 bits (174), Expect = 7e-14
 Identities = 20/118 (16%), Positives = 35/118 (29%), Gaps = 5/118 (4%)

Query: 581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISV-APVTDWIYYDTIYSERYMG---L 636
           ++    ++ G + GGY     L +  S+VF  G  V A        +  Y+         
Sbjct: 8   VNPNSVSVSGLASGGYMA-AQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPS 66

Query: 637 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQ 694
            T                V  +  ++  +  G+ D  V       L   L + D    
Sbjct: 67  ITTPTANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSAN 124

>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PHB depolymerase-like
domain: Polyhydroxybutyrate depolymerase
species: Penicillium funiculosum [TaxId: 28572]

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 5/93 (5%)

Query: 681 MLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH 740
             A++  +   M+     +  P    N++ +    + +  +  + K   +  G+ D  V 
Sbjct: 49  DCARNQYYTSCMYNGYPSITTP--TANMKSWSGNQIASVANLGQRK-IYMWTGSSDTTVG 105

Query: 741 FQQSMMLAKSLQHADIMFQSQ--TYPDEEHGLI 771
                 L   L + D        T     H   
Sbjct: 106 PNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFP 138

>d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} Length = 381

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: Alpha-amino acid ester hydrolase
species: Xanthomonas citri [TaxId: 346]

 Score = 61.7 bits (148), Expect = 1e-10
 Identities = 38/328 (11%), Positives = 78/328 (23%), Gaps = 46/328 (14%)

Query: 487 LFLPPGIDTSGHKKYPLLI--HVYGGPSSFQVTERFSVD-----WNLYLADNKDIVVAYI 539
           + LP G      K  P+++    Y      +      +       +    +   I V   
Sbjct: 41  IVLPKG-----AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQD 95

Query: 540 ----DGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595
                G                        D  +   +L +N       +  + G SY G
Sbjct: 96  VRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKN-VSESNGKVGMIGSSYEG 154

Query: 596 YATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV 655
           +        +P    K  +  +P+ D    D  ++        F+              +
Sbjct: 155 FTVV-MALTNPHPALKVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGI 213

Query: 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAA 715
            R              D+         A     A  + Q   +  L         ++  A
Sbjct: 214 AR-----------QGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQA 262

Query: 716 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQ-----------------HADIMF 758
           L+  + R   K   +    + D      ++    +++                 H+ + +
Sbjct: 263 LDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAAMEPRDKRNTLNYLVMGPWRHSQVNY 322

Query: 759 QSQTYPDEEHGLIGVRPHFYHTLERFLD 786
                          R   +  L  F D
Sbjct: 323 DGSALGALNFEGDTARQFRHDVLRPFFD 350

>d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} Length = 385

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: Alpha-amino acid ester hydrolase
species: Acetobacter pasteurianus [TaxId: 438]

 Score = 61.3 bits (147), Expect = 2e-10
 Identities = 44/328 (13%), Positives = 84/328 (25%), Gaps = 46/328 (14%)

Query: 487 LFLPPGIDTSGHKKYPLLI--HVYGGPSSFQVTERFSVDWNLYLAD-----NKDIVVAYI 539
           + +P        +  P+L+    Y                 +             +  + 
Sbjct: 45  IVIPKN-----ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQ 99

Query: 540 DGRNS-----ALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYG 594
           D R               +       T E  D  +   +L  N       R  + G SY 
Sbjct: 100 DIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHN-VPESNGRVGMTGSSYE 158

Query: 595 GYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654
           G+   +A  LDP    K     +P+ D    D  +         F+  +         N 
Sbjct: 159 GFTVVMA-LLDPHPALKVAAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGND 217

Query: 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIA 714
           + R     Y         N     S     +    D     QR    P ++     ++  
Sbjct: 218 IPRRDADDY--------TNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAYDAF---WQGQ 266

Query: 715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQ----------------HADIMF 758
           AL+  + + +    +L    + D      ++   ++L+                H+ + +
Sbjct: 267 ALDKILAQRKPTVPMLWEQGLWDQEDMWGAIHAWQALKDADVKAPNTLVMGPWRHSGVNY 326

Query: 759 QSQTYPDEEHGLIGVRPHFYHTLERFLD 786
              T    E        +       F D
Sbjct: 327 NGSTLGPLEFEGDTAHQYRRDVFRPFFD 354

>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} Length = 288

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Mycobacterial antigens
domain: Antigen 85a
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 56.1 bits (134), Expect = 4e-09
 Identities = 31/221 (14%), Positives = 61/221 (27%), Gaps = 22/221 (9%)

Query: 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYL 528
            VEY+ VP  P+M   +K+    G         P L  + G  +    +           
Sbjct: 8   PVEYLQVP-SPSMGRDIKVQFQSG-----GANSPALYLLDGLRAQDDFSGWDINTPAFEW 61

Query: 529 ADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGT---VEIYDQINVTRYLQENLPYIDKTR 585
            D   + V    G  S+   +  + A  +        E +    +  +LQ N      T 
Sbjct: 62  YDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHV-KPTG 120

Query: 586 TAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD---------WIYYDTIYSERYMGL 636
           +A+ G S    +    LA+     F    +++ + D                        
Sbjct: 121 SAVVGLSMAASSAL-TLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASD 179

Query: 637 PTFEDNLEGYKIAALNNKVDRIRDK--QYLLVHGTMDDNVH 675
                    ++       V ++     +  +  G    +  
Sbjct: 180 MWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDL 220

>d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: 2,6-dihydropseudooxynicotine hydrolase-like
domain: 2,6-dihydropseudooxynicotine hydrolase
species: Arthrobacter nicotinovorans [TaxId: 29320]

 Score = 55.4 bits (132), Expect = 1e-08
 Identities = 37/233 (15%), Positives = 67/233 (28%), Gaps = 29/233 (12%)

Query: 468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLY 527
           P  E   + +   +   V + +P G        +P +I + G  S+ +     S      
Sbjct: 104 PPAERHELVVD-GIPMPVYVRIPEG-----PGPHPAVIMLGGLESTKE----ESFQMENL 153

Query: 528 LADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTA 587
           + D       + DG          + AG     T  + D +         L  I      
Sbjct: 154 VLDRGMATATF-DGPGQGEMFEYKRIAGDYEKYTSAVVDLL-------TKLEAIRNDAIG 205

Query: 588 IWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP-------TFE 640
           + G S GG     + A +P       IS    +D  Y+D                    E
Sbjct: 206 VLGRSLGGNYALKSAACEPR--LAACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEE 263

Query: 641 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF 693
             L  +      + + +I      ++HG   D V       + + +    +  
Sbjct: 264 ARLHVHAALETRDVLSQIA-CPTYILHGV-HDEVPLSFVDTVLELVPAEHLNL 314

>d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: 2,6-dihydropseudooxynicotine hydrolase-like
domain: 2,6-dihydropseudooxynicotine hydrolase
species: Arthrobacter nicotinovorans [TaxId: 29320]

 Score = 41.5 bits (96), Expect = 3e-04
 Identities = 10/85 (11%), Positives = 24/85 (28%), Gaps = 4/85 (4%)

Query: 705 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYP 764
           E  L  +      + + +I      ++HG   D V       + + +    +        
Sbjct: 263 EARLHVHAALETRDVLSQIA-CPTYILHGV-HDEVPLSFVDTVLELVPAEHLNL--VVEK 318

Query: 765 DEEHGLIGVRPHFYHTLERFLDSCF 789
           D +H    +       +  +L    
Sbjct: 319 DGDHCCHNLGIRPRLEMADWLYDVL 343

>d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} Length = 273

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Feruloyl esterase domain of the cellulosomal xylanase y
species: Clostridium thermocellum [TaxId: 1515]

 Score = 54.0 bits (128), Expect = 2e-08
 Identities = 19/228 (8%), Positives = 49/228 (21%), Gaps = 15/228 (6%)

Query: 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNK------ 532
            N    + ++LP G D +  KKY +   ++GG  +        V     L          
Sbjct: 35  INGTKSLNVYLPYGYDPN--KKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELE 92

Query: 533 DIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWS 592
            ++V                    + +                       +      G++
Sbjct: 93  PLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFA 152

Query: 593 YGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALN 652
            GG  T   + ++  +     + ++    +       +             +        
Sbjct: 153 MGGLTTW-YVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAA 211

Query: 653 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMG 700
                    + +            +       +   +   F      G
Sbjct: 212 TG------SEDIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPG 253

>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 280

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Prolyl oligopeptidase, C-terminal domain
domain: Prolyl oligopeptidase, C-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 53.7 bits (127), Expect = 3e-08
 Identities = 32/217 (14%), Positives = 57/217 (26%), Gaps = 11/217 (5%)

Query: 487 LFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL 546
           +    GI       +P  ++ YGG +   +T  +SV   +++     ++           
Sbjct: 24  IVHKKGIKLD--GSHPAFLYGYGGFNI-SITPNYSVSRLIFVRHMGGVLAVANIRGGGEY 80

Query: 547 KGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD- 605
                K              Q     YL +      K  T   G + G      A     
Sbjct: 81  GETWHKGGILANKQNCFDDFQCAA-EYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPD 139

Query: 606 -PSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQ-- 662
               V      +  +    Y          G    + + E     +  + V         
Sbjct: 140 LFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQ 199

Query: 663 ---YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQ 696
               LL+    DD V    S+    +LQ+     + Q
Sbjct: 200 YPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQ 236

>d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain
species: Lactococcus lactis [TaxId: 1358]

 Score = 50.7 bits (120), Expect = 4e-07
 Identities = 45/328 (13%), Positives = 84/328 (25%), Gaps = 55/328 (16%)

Query: 480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADN---KDIVV 536
           +M  +++      I         L       P   +   RF+  W   L D    +    
Sbjct: 80  DMNVELEEKTSHEIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFAS 139

Query: 537 AYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKT------------ 584
            Y+ G  +           Y+     +IY    V  +L                      
Sbjct: 140 IYVAGVGTRSSDGFQTSGDYQ-----QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWAN 194

Query: 585 -RTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNL 643
            + A+ G SY G       A       +  ++ A ++ W  Y+       +  P      
Sbjct: 195 GKVAMTGKSYLGT-MAYGAATTGVEGLELILAEAGISSW--YNYYRENGLVRSPGGFPGE 251

Query: 644 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPT 703
           +   +AAL    +                           K     +             
Sbjct: 252 DLDVLAALTYSRNLDGAD--------------------FLKGNAEYEKRLAEMTAALDRK 291

Query: 704 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD----IMFQ 759
             D  + +         D+++    L+VHG  D NV  +Q+    K+L         + +
Sbjct: 292 SGDYNQFWHDRNYLINTDKVKAD-VLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHR 350

Query: 760 SQ-TYPDEEHGLIGVRPHFYHTLERFLD 786
               Y +           F  T+  +  
Sbjct: 351 GAHIYMNSWQ-----SIDFSETINAYFV 373

>d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} Length = 246

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Enterochelin esterase, catalytic domain
species: Shigella flexneri 2a str. 2457T [TaxId: 198215]

 Score = 49.2 bits (116), Expect = 5e-07
 Identities = 26/221 (11%), Positives = 54/221 (24%), Gaps = 23/221 (10%)

Query: 480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYI 539
               +V +F    +     ++ PL + + G                  L   + +  A  
Sbjct: 26  KNSRRVWIFTTGDVT---AEERPLAVLLDGEF---WAQSMPVWPVLTSLTHRQQLPPAVY 79

Query: 540 DGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATG 599
              ++    +                 Q  +              RT + G S+GG +  
Sbjct: 80  VLIDAIDTTHRAHELPCNA-DFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSAL 138

Query: 600 LALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR 659
            A    P   F C +S +    W +         +                L        
Sbjct: 139 YAGLHWP-ERFGCVLSQSGSYWWPHRGGQQEGVLL--------------EKLKAGEVSAE 183

Query: 660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMG 700
             + +L  G  +  +  + +  L   L         ++  G
Sbjct: 184 GLRIVLEAGIREPMIM-RANQALYAQLHPIKESIFWRQVDG 223

>d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetyl xylan esterase-like
domain: Acetyl xylan esterase TM0077
species: Thermotoga maritima [TaxId: 2336]

 Score = 49.7 bits (117), Expect = 7e-07
 Identities = 38/286 (13%), Positives = 66/286 (23%), Gaps = 43/286 (15%)

Query: 434 PGIPEIMLFDKTGQRLLYWDTNEDLRTALTNI--TLPSVEYMSVPIQPNMEAQVKLFLPP 491
           P   E   FD+  +  L       L      +   L +VE   V        ++K +L  
Sbjct: 15  PERYEEKDFDEFWEETLAESEKFPLDPVFERMESHLKTVEAYDVTFSGYRGQRIKGWLLV 74

Query: 492 GIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTL 551
                   K P ++   G         R      L+       +   +D R         
Sbjct: 75  PKLEEE--KLPCVVQYIGYNGG-----RGFPHDWLFWPSM-GYICFVMDTRGQGSGWLKG 126

Query: 552 KYAGYRRLGT---------------------VEIYDQINVTRYLQENLPYIDKTRTAIWG 590
               Y                              D +          P +D+ R  I G
Sbjct: 127 DTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASF-PQVDQERIVIAG 185

Query: 591 WSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSE-------RYMGLPTFEDNL 643
            S GG       AL           V  +  +     +           ++     ++ +
Sbjct: 186 GSQGGGIALAVSALSK-KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEI 244

Query: 644 EGYKIAALN--NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQ 687
               ++  +  N   R +    L   G MD+               
Sbjct: 245 VFRTLSYFDGVNFAARAKIP-ALFSVGLMDNICPPSTVFAAYNYYA 289

>d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} Length = 280

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Mycobacterial antigens
domain: Antigen 85c
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 49.5 bits (117), Expect = 7e-07
 Identities = 22/155 (14%), Positives = 42/155 (27%), Gaps = 11/155 (7%)

Query: 470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLA 529
           VEY+ VP   +M   +K+    G           +  + G  +                 
Sbjct: 6   VEYLQVP-SASMGRDIKVQFQGG-------GPHAVYLLDGLRAQDDYNGWDINTPAFEEY 57

Query: 530 DNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQ--ENLPYIDKTRTA 587
               + V    G  S+   +  + +          ++           +    +  T  A
Sbjct: 58  YQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNA 117

Query: 588 IWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW 622
             G S  G +  L LA      F    S++   + 
Sbjct: 118 AVGLSMSGGSA-LILAAYYPQQFPYAASLSGFLNP 151

>d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} Length = 255

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Feruloyl esterase domain of the cellulosomal xylanase z
species: Clostridium thermocellum [TaxId: 1515]

 Score = 48.1 bits (113), Expect = 1e-06
 Identities = 29/221 (13%), Positives = 55/221 (24%), Gaps = 25/221 (11%)

Query: 480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYI 539
           N     +++LPPG      KKY +L  ++G   S           N  +ADN        
Sbjct: 33  NSTRPARVYLPPGYSKD--KKYSVLYLLHGIGGSENDWFEGGGRAN-VIADNLIAEGKIK 89

Query: 540 DGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATG 599
                    N                   ++  Y++ N                 G    
Sbjct: 90  PLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQS 149

Query: 600 LALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR 659
             + L   + F     ++   +    + ++ +                      K  R +
Sbjct: 150 FNIGLTNLDKFAYIGPISAAPNTYPNERLFPDGG--------------------KAAREK 189

Query: 660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMG 700
            K   +  GT D  +       + +     +I        G
Sbjct: 190 LKLLFIACGTNDSLI--GFGQRVHEYCVANNINHVYWLIQG 228

>d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 267

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Mycobacterial antigens
domain: Antigen pt51/mpb51
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 44.9 bits (105), Expect = 2e-05
 Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 14/155 (9%)

Query: 468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLY 527
              E + VP  P+M   + +    G           +  +    +   V+   +    + 
Sbjct: 2   APYENLMVP-SPSMGRDIPVAFLAG-------GPHAVYLLDAFNAGPDVSNWVTAGNAMN 53

Query: 528 LADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTA 587
               K I V    G   ++     +  G ++  T   +    +  +L  N         A
Sbjct: 54  TLAGKGISVVAPAGGAYSM-YTNWEQDGSKQWDT---FLSAELPDWLAANRGL-APGGHA 108

Query: 588 IWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW 622
             G + GGY   +ALA    + F    S++     
Sbjct: 109 AVGAAQGGYGA-MALAAFHPDRFGFAGSMSGFLYP 142

>d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetyl xylan esterase-like
domain: Cephalosporin C deacetylase
species: Bacillus subtilis [TaxId: 1423]

 Score = 42.8 bits (99), Expect = 9e-05
 Identities = 26/214 (12%), Positives = 53/214 (24%), Gaps = 29/214 (13%)

Query: 497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGY 556
               +P ++  +G  +S+       +   +  A +       +  R      +T      
Sbjct: 78  KEGPHPAIVKYHGYNASY----DGEIHEMVNWALH-GYATFGMLVRGQQRSEDTSISPHG 132

Query: 557 RRLG-------------TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603
             LG                +Y        +  +   +D+TR  + G S GG  T  A A
Sbjct: 133 HALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAA 192

Query: 604 LDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQY 663
           L              ++++     +  E+            G     +            
Sbjct: 193 LSD-IPKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIM 251

Query: 664 ----------LLVHGTMDDNVHFQQSMMLAKSLQ 687
                     L+  G +D              L+
Sbjct: 252 NLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLE 285

>d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetyl xylan esterase-like
domain: Cephalosporin C deacetylase
species: Bacillus subtilis [TaxId: 1423]

 Score = 39.8 bits (91), Expect = 0.001
 Identities = 10/58 (17%), Positives = 14/58 (24%), Gaps = 6/58 (10%)

Query: 729 LLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD 786
           L+  G +D              L+    +     Y    H  I   P F      F  
Sbjct: 262 LMSIGLIDKVTPPSTVFAAYNHLETKKELK---VYRYFGHEYI---PAFQTEKLAFFK 313

>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hypothetical protein TT1662
domain: Hypothetical protein TT1662
species: Thermus thermophilus [TaxId: 274]

 Score = 41.7 bits (96), Expect = 2e-04
 Identities = 23/196 (11%), Positives = 49/196 (25%), Gaps = 15/196 (7%)

Query: 498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVA--YIDGRNSALKGNTLKYAG 555
                LL+ ++G   S    +   +      A+   +++A              + K   
Sbjct: 21  EAPKALLLALHGLQGS----KEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPR 76

Query: 556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGIS 615
           Y               R + E           + G S G +   L LA            
Sbjct: 77  YVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFI 136

Query: 616 VAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH 675
            +     +    +  +  +              A    + +       L +HG+ D  V 
Sbjct: 137 GSGFPMKLPQGQVVEDPGV---------LALYQAPPATRGEAYGGVPLLHLHGSRDHIVP 187

Query: 676 FQQSMMLAKSLQHADI 691
             +     ++L+    
Sbjct: 188 LARMEKTLEALRPHYP 203

>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} Length = 260

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acylamino-acid-releasing enzyme, C-terminal donain
domain: Acylamino-acid-releasing enzyme, C-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

 Score = 39.9 bits (91), Expect = 7e-04
 Identities = 10/58 (17%), Positives = 17/58 (29%), Gaps = 2/58 (3%)

Query: 732 HGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGV--RPHFYHTLERFLDS 787
           H   D     +  + L   L      F++   PD  H +  +            FL +
Sbjct: 199 HPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLAT 256

>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} Length = 260

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acylamino-acid-releasing enzyme, C-terminal donain
domain: Acylamino-acid-releasing enzyme, C-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

 Score = 38.7 bits (88), Expect = 0.002
 Identities = 37/246 (15%), Positives = 67/246 (27%), Gaps = 15/246 (6%)

Query: 455 NEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSF 514
            EDLR      ++     + V           +              P ++ V+GGP + 
Sbjct: 2   PEDLRR-----SIAGSRLVWVESFDGSRVPTYVLESGRAP----TPGPTVVLVHGGPFA- 51

Query: 515 QVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYL 574
           + ++ +        A    +V+    G     +   LK  G    G +E           
Sbjct: 52  EDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARE 111

Query: 575 QENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM 634
                 +      I G+SYGGY T  AL + P          + V     Y+   +    
Sbjct: 112 SGLASELY-----IMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRN 166

Query: 635 GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQ 694
            +            +           +   L+H   D     +  + L   L      F+
Sbjct: 167 FIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFE 226

Query: 695 SQRYMG 700
           +     
Sbjct: 227 AHIIPD 232

>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Myristoyl-ACP-specific thioesterase
species: Vibrio harveyi [TaxId: 669]

 Score = 37.6 bits (86), Expect = 0.004
 Identities = 21/213 (9%), Positives = 52/213 (24%), Gaps = 32/213 (15%)

Query: 496 SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG 555
           +   K   ++   G           +     YL+ N   V  Y D        +    +G
Sbjct: 27  NVPFKNNTILIASGFARRMDHFAGLAE----YLSTNGFHVFRY-DSL-----HHVGLSSG 76

Query: 556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGIS 615
                T  +    N    +   L         +   S         ++    +     + 
Sbjct: 77  SIDEFT--MTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSFLITAVG 134

Query: 616 VAPVTDWIYYDTIYSERYMGLPTFEDNLEGYK-------------------IAALNNKVD 656
           V  + D +     +    + +    ++L+                      + +  +KV 
Sbjct: 135 VVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVA 194

Query: 657 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 689
                  +      DD V  ++   +   ++  
Sbjct: 195 NT-SVPLIAFTANNDDWVKQEEVYDMLAHIRTG 226

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	790
d2bgra2	258	Dipeptidyl peptidase IV/CD26, C-terminal domain {P	100.0
d1xfda2	258	Dipeptidyl aminopeptidase-like protein 6, DPP6, C-	99.98
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.97
d2hu7a2	260	Acylamino-acid-releasing enzyme, C-terminal donain	99.96
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.92
d1qfma2	280	Prolyl oligopeptidase, C-terminal domain {Pig (Sus	99.9
d2jbwa1	360	2,6-dihydropseudooxynicotine hydrolase {Arthrobact	99.88
d1l7aa_	318	Cephalosporin C deacetylase {Bacillus subtilis [Ta	99.88
d1vlqa_	322	Acetyl xylan esterase TM0077 {Thermotoga maritima	99.87
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.86
d2fuka1	218	XC6422 protein {Xanthomonas campestris [TaxId: 339	99.85
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.84
d1thta_	302	Myristoyl-ACP-specific thioesterase {Vibrio harvey	99.83
d1jfra_	260	Lipase {Streptomyces exfoliatus [TaxId: 1905]}	99.83
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.82
d1lzla_	317	Heroin esterase {Rhodococcus sp. [TaxId: 1831]}	99.8
d1q0ra_	297	Aclacinomycin methylesterase RdmC {Streptomyces pu	99.79
d1imja_	208	Ccg1/TafII250-interacting factor B (Cib) {Human (H	99.79
d1jkma_	358	Carboxylesterase {Bacillus subtilis, brefeldin A e	99.79
d2pbla1	261	Uncharacterized protein TM1040_2492 {Silicibacter	99.77
d1jjia_	311	Carboxylesterase {Archaeon Archaeoglobus fulgidus	99.77
d1dina_	233	Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI	99.77
d1mtza_	290	Tricorn interacting factor F1 {Archaeon Thermoplas	99.76
d1mpxa2	381	Alpha-amino acid ester hydrolase {Xanthomonas citr	99.76
d1uk8a_	271	Meta-cleavage product hydrolase CumD {Pseudomonas	99.76
d1ufoa_	238	Hypothetical protein TT1662 {Thermus thermophilus	99.76
d1u4na_	308	Carboxylesterase {Alicyclobacillus acidocaldarius	99.75
d1lnsa3	405	X-Prolyl dipeptidyl aminopeptidase PepX, middle do	99.75
d2i3da1	218	Hypothetical protein Atu1826 {Agrobacterium tumefa	99.75
d1ju3a2	347	Bacterial cocaine esterase N-terminal domain {Rhod	99.75
d1c4xa_	281	2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas	99.74
d1a8qa_	274	Bromoperoxidase A1 {Streptomyces aureofaciens [Tax	99.74
d1vkha_	263	Putative serine hydrolase Ydr428c {Baker's yeast (	99.73
d1zd3a2	322	Mammalian epoxide hydrolase, C-terminal domain {Hu	99.71
d2h1ia1	202	Carboxylesterase {Bacillus cereus [TaxId: 1396]}	99.71
d1k8qa_	377	Gastric lipase {Dog (Canis familiaris) [TaxId: 961	99.71
d1va4a_	271	Arylesterase {Pseudomonas fluorescens [TaxId: 294]	99.71
d1a8sa_	273	Chloroperoxidase F {Pseudomonas fluorescens [TaxId	99.7
d1j1ia_	268	Meta cleavage compound hydrolase CarC {Janthinobac	99.7
d1a88a_	275	Chloroperoxidase L {Streptomyces lividans [TaxId:	99.7
d1b6ga_	310	Haloalkane dehalogenase {Xanthobacter autotrophicu	99.7
d1uxoa_	186	Hypothetical protein YdeN {Bacillus subtilis [TaxI	99.7
d1tqha_	242	Carboxylesterase Est {Bacillus stearothermophilus	99.69
d1jjfa_	255	Feruloyl esterase domain of the cellulosomal xylan	99.69
d2b9va2	385	Alpha-amino acid ester hydrolase {Acetobacter past	99.69
d2rhwa1	283	2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas	99.69
d1azwa_	313	Proline iminopeptidase {Xanthomonas campestris, pv	99.68
d1xkla_	258	Salicylic acid-binding protein 2 (SABP2) {Common t	99.68
d1bn7a_	291	Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1	99.67
d3c70a1	256	Hydroxynitrile lyase {Rubber tree (Hevea brasilien	99.66
d2gzsa1	265	Enterobactin and salmochelin hydrolase IroE {Esche	99.66
d1m33a_	256	Biotin biosynthesis protein BioH {Escherichia coli	99.66
d1fj2a_	229	Acyl protein thioesterase 1 {Human (Homo sapiens)	99.65
d1brta_	277	Bromoperoxidase A2 {Streptomyces aureofaciens [Tax	99.65
d1hkha_	279	Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]	99.64
d1ehya_	293	Bacterial epoxide hydrolase {Agrobacterium radioba	99.64
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.63
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	99.63
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	99.63
d3b5ea1	209	Uncharacterized protein Mll8374 {Mesorhizobium lot	99.63
d3c8da2	246	Enterochelin esterase, catalytic domain {Shigella	99.63
d2r8ba1	203	Uncharacterized protein Atu2452 {Agrobacterium tum	99.63
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.61
d1sfra_	288	Antigen 85a {Mycobacterium tuberculosis [TaxId: 17	99.61
d1wm1a_	313	Proline aminopeptidase {Serratia marcescens [TaxId	99.6
d1auoa_	218	Carboxylesterase {Pseudomonas fluorescens [TaxId:	99.58
d1r3da_	264	Hypothetical protein VC1974 {Vibrio cholerae [TaxI	99.53
d1mj5a_	298	Haloalkane dehalogenase {Sphingomonas paucimobilis	99.5
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.48
d1qlwa_	318	A novel bacterial esterase {Alcaligenes sp. [TaxId	99.45
d1pv1a_	299	Hypothetical esterase YJL068C {Baker's yeast (Sacc	99.45
d1wb4a1	273	Feruloyl esterase domain of the cellulosomal xylan	99.41
d1r88a_	267	Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta	99.39
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.38
d1pjaa_	268	Palmitoyl protein thioesterase 2 {Human (Homo sapi	99.38
d1dqza_	280	Antigen 85c {Mycobacterium tuberculosis [TaxId: 17	99.36
d1qo7a_	394	Bacterial epoxide hydrolase {Aspergillus niger [Ta	99.31
d2pl5a1	362	Homoserine O-acetyltransferase {Leptospira interro	99.25
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.18
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.17
d1ispa_	179	Lipase A {Bacillus subtilis [TaxId: 1423]}	99.17
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.16
d2vata1	376	Acetyl-CoA:deacetylcephalosporin C acetyltransfera	99.16
d2b61a1	357	Homoserine O-acetyltransferase {Haemophilus influe	99.16
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.12
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.07
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.06
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.04
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.04
d1jmkc_	230	Surfactin synthetase, SrfA {Bacillus subtilis [Tax	99.02
d2d81a1	318	Polyhydroxybutyrate depolymerase {Penicillium funi	99.0
d1tcaa_	317	Triacylglycerol lipase {Yeast (Candida antarctica)	99.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	98.96
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.93
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.92
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	98.9
d2h7xa1	283	Picromycin polyketide synthase {Streptomyces venez	98.87
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	98.86
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.85
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	98.81
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	98.81
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	98.79
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.77
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	98.76
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.74
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	98.72
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	98.7
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.69
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	98.68
d1tbga_	340	beta1-subunit of the signal-transducing G protein	98.66
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	98.63
d1ex9a_	285	Lipase {Pseudomonas aeruginosa [TaxId: 287]}	98.61
d1cvla_	319	Lipase {Chromobacterium viscosum [TaxId: 42739]}	98.57
d1llfa_	534	Type-B carboxylesterase/lipase {Candida cylindrace	98.53
d1xkta_	286	Fatty acid synthase {Human (Homo sapiens) [TaxId:	98.53
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.51
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	98.47
d1qe3a_	483	Thermophilic para-nitrobenzyl esterase (PNB estera	98.43
d1thga_	544	Type-B carboxylesterase/lipase {Fungus (Geotrichum	98.43
d2dsta1	122	Hypothetical protein TTHA1544 {Thermus thermophilu	98.4
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.4
d1ukca_	517	Esterase EstA {Aspergillus niger [TaxId: 5061]}	98.38
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	98.37
d2ha2a1	542	Acetylcholinesterase {Mouse (Mus musculus) [TaxId:	98.35
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.35
d1tbga_	340	beta1-subunit of the signal-transducing G protein	98.35
d1ea5a_	532	Acetylcholinesterase {Pacific electric ray (Torped	98.34
d2h7ca1	532	Mammalian carboxylesterase (liver carboxylesterase	98.33
d1p0ia_	526	Butyryl cholinesterase {Human (Homo sapiens) [TaxI	98.32
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.27
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.21
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	98.21
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.18
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	98.17
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	98.16
d1dx4a_	571	Acetylcholinesterase {Fruit fly (Drosophila melano	98.12
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	98.07
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	98.07
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	98.07
d2bcea_	579	Bile-salt activated lipase (cholesterol esterase)	98.05
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.02
g1wht.1	409	Serine carboxypeptidase II {Wheat (Triticum vulgar	98.01
d1mo2a_	255	Erythromycin polyketide synthase {Saccharopolyspor	98.01
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	98.01
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	97.97
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.97
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	97.93
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	97.92
d1rp1a2	337	Pancreatic lipase, N-terminal domain {Dog (Canis f	97.91
d1ivya_	452	Human 'protective protein', HPP {Human (Homo sapie	97.81
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	97.78
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	97.77
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	97.77
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	97.74
d1bu8a2	338	Pancreatic lipase, N-terminal domain {Rat (Rattus	97.7
d1ei9a_	279	Palmitoyl protein thioesterase 1 {Cow (Bos taurus)	97.64
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.61
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	97.57
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.49
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	97.44
d1wpxa1	421	Serine carboxypeptidase II {Baker's yeast (Sacchar	97.27
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	97.18
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	97.07
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	97.07
d1ac5a_	483	Serine carboxypeptidase II {Baker's yeast (Sacchar	96.93
g1gxs.1	425	Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T	96.87
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	96.85
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	96.19
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	96.1
d1ku0a_	388	Lipase L1 {Bacillus stearothermophilus [TaxId: 142	95.63
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	94.97
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	94.95
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	94.93
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	94.91
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	94.68
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	94.66
d2hu7a2	260	Acylamino-acid-releasing enzyme, C-terminal donain	91.86
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	91.5
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	90.36
d1lgya_	265	Triacylglycerol lipase {Rhizopus niveus [TaxId: 48	90.15
d3tgla_	265	Triacylglycerol lipase {Rhizomucor miehei [TaxId:	89.03
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	88.9
d1tiba_	269	Triacylglycerol lipase {Thermomyces lanuginosus, f	88.53
d1uwca_	261	Feruloyl esterase A {Aspergillus niger [TaxId: 506	88.24
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	87.79
d1tiaa_	271	Triacylglycerol lipase {Penicillium camembertii [T	87.74
d1qfma2	280	Prolyl oligopeptidase, C-terminal domain {Pig (Sus	86.88
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	83.32
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	82.33
d2bgra2	258	Dipeptidyl peptidase IV/CD26, C-terminal domain {P	81.82

>d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: DPP6 catalytic domain-like
domain: Dipeptidyl peptidase IV/CD26, C-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.7e-31  Score=266.86  Aligned_cols=252  Identities=44%  Similarity=0.861  Sum_probs=207.5

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+.+.+...+|.++.+.+++|++++  +++++|+||++|||++.......+...+...+++.+||+|+.+|+||+++++.
T Consensus         3 ~~~~~~~~~~~~~~~~~l~lP~~~~--~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~   80 (258)
T d2bgra2           3 SKKLDFIILNETKFWYQMILPPHFD--KSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGD   80 (258)
T ss_dssp             EEEEEEEEETTEEEEEEEEECTTCC--TTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCH
T ss_pred             ceeEEEEEeCCcEEEEEEEECCCcC--CCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcch
Confidence            4677888889999999999999998  78999999999998776555566677777788888999999999999998898


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY  629 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~  629 (790)
                      .+.......++..++.+..++++++.+ .+.+|.++|+++|+|+||.+++.++..+|. .+++++..++......+....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~id~~~i~i~G~S~GG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  158 (258)
T d2bgra2          81 KIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYGGYVTSMVLGSGSG-VFKCGIAVAPVSRWEYYDSVY  158 (258)
T ss_dssp             HHHGGGTTCTTSHHHHHHHHHHHHHTT-SSSEEEEEEEEEEETHHHHHHHHHHTTTCS-CCSEEEEESCCCCGGGSBHHH
T ss_pred             HHHHhhhhhhhhHHHHHHHHHHHHhhh-hcccccccccccCcchhhcccccccccCCC-cceEEEEeecccccccccccc
Confidence            888888888988889999999999988 788999999999999999999999998875 888888888876655443333


Q ss_pred             hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                      ....++.+...                                                                 ....
T Consensus       159 ~~~~~~~~~~~-----------------------------------------------------------------~~~~  173 (258)
T d2bgra2         159 TERYMGLPTPE-----------------------------------------------------------------DNLD  173 (258)
T ss_dssp             HHHHHCCCSTT-----------------------------------------------------------------TTHH
T ss_pred             cchhcccccch-----------------------------------------------------------------hhHH
Confidence            33332222111                                                                 1112


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHH
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDS  787 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~  787 (790)
                      .+...++...+++++++|+|++||++|.+||+.++.+++++|+++|+++++++||+++|++..  ...++++.+.+||++
T Consensus       174 ~~~~~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~  253 (258)
T d2bgra2         174 HYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQ  253 (258)
T ss_dssp             HHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred             HhhcccccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHH
Confidence            223333446677764589999999999999999999999999999999999999999999876  678899999999999


Q ss_pred             hhC
Q psy463          788 CFA  790 (790)
Q Consensus       788 ~l~  790 (790)
                      +|+
T Consensus       254 ~l~  256 (258)
T d2bgra2         254 CFS  256 (258)
T ss_dssp             HTT
T ss_pred             Hhc
Confidence            985

>d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: DPP6 catalytic domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.9e-32  Score=273.78  Aligned_cols=242  Identities=32%  Similarity=0.647  Sum_probs=195.5

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      ||.+|++++++|.+++  .++++|+||++||||+.....+.|...+..++++++||+|+++|+||++++|..+......+
T Consensus        11 dg~~l~~~l~~P~~~~--~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~   88 (258)
T d1xfda2          11 DDYNLPMQILKPATFT--DTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRR   88 (258)
T ss_dssp             TTEEECCBEEBCSSCC--SSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTC
T ss_pred             CCeEEEEEEEECCCcC--CCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhcc
Confidence            9999999999999987  78889999999999877666777877777778888999999999999999999988888888


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCcccccccchhhhcC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDWIYYDTIYSERYMG  635 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~~~~~~~~~~~~~g  635 (790)
                      ++..++.|+.++++++.+ .+.+|.+||+|+|+|+||++++.++...+.   ..+++.+...++..+..........+++
T Consensus        89 ~g~~~~~d~~~~i~~l~~-~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (258)
T d1xfda2          89 LGLLEEKDQMEAVRTMLK-EQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLG  167 (258)
T ss_dssp             TTTHHHHHHHHHHHHHHS-SSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHHHC
T ss_pred             chhHHHHHHHHhhhhhcc-cccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecccccccccccc
Confidence            888899999999999998 788999999999999999999998876654   2466777777765543322211112222


Q ss_pred             CCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhh
Q psy463          636 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAA  715 (790)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  715 (790)
                      .+  ...                                                                 ...+...+
T Consensus       168 ~~--~~~-----------------------------------------------------------------~~~~~~~s  180 (258)
T d1xfda2         168 LH--GLD-----------------------------------------------------------------NRAYEMTK  180 (258)
T ss_dssp             CC--SSC-----------------------------------------------------------------CSSTTTTC
T ss_pred             cc--ccc-----------------------------------------------------------------hHHhhccc
Confidence            21  111                                                                 11122223


Q ss_pred             hhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          716 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       716 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      +...++++.++|+|++||+.|.+||++++.+++++|+++++++++++||+++|.+..  ...++++.+++||++||+
T Consensus       181 ~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~~~  257 (258)
T d1xfda2         181 VAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR  257 (258)
T ss_dssp             THHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred             hhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence            335555554789999999999999999999999999999999999999999999876  667789999999999986

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.3e-28  Score=260.21  Aligned_cols=397  Identities=19%  Similarity=0.369  Sum_probs=269.5

Q ss_pred             CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeeccc------ce
Q psy463            9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQ------NR   82 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~------~~   82 (790)
                      ....+.|++|++.+.  +..++  .++.+.+..++...+   .....+.........+++|++.++.....+      ..
T Consensus        18 ~~~~~~W~~~~~~~~--~~~~g--~i~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~   90 (465)
T d1xfda1          18 HDPEAKWISDTEFIY--REQKG--TVRLWNVETNTSTVL---IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYT   90 (465)
T ss_dssp             CCCCCCBSSSSCBCC--CCSSS--CEEEBCGGGCCCEEE---ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred             CCCCCEEeCCCcEEE--EeCCC--cEEEEECCCCCEEEE---EcCccccccccceeEECCCCCeEEEEEcccceeEeecc
Confidence            345567999998653  22233  577787776642111   111122222333445788888664443322      12


Q ss_pred             eEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcce
Q psy463           83 ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  162 (790)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  162 (790)
                      ....+++..++....+.......+   ....|.|||||++|+|+.              -++||+.+..++.      ..
T Consensus        91 ~~~~i~d~~~~~~~~l~~~~~~~~---~l~~~~wSPDG~~iafv~--------------~~nl~~~~~~~~~------~~  147 (465)
T d1xfda1          91 GYYVLSKIPHGDPQSLDPPEVSNA---KLQYAGWGPKGQQLIFIF--------------ENNIYYCAHVGKQ------AI  147 (465)
T ss_dssp             SEEEEEESSSCCCEECCCTTCCSC---CCSBCCBCSSTTCEEEEE--------------TTEEEEESSSSSC------CE
T ss_pred             ccEEEEEccCCceeeccCccCCcc---ccceeeeccCCceEEEEe--------------cceEEEEecCCCc------eE
Confidence            355677887776655433222111   124589999999999987              2389999987764      44


Q ss_pred             eccccce--EE----------------EEEEeeeccCCccEEEEecccCC----------CCCCCc------------cc
Q psy463          163 PLTRGRF--TV----------------TEILAWDERENNPLLILSHNQES----------DGSTPV------------DS  202 (790)
Q Consensus       163 ~lt~~~~--~~----------------~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~------------~~  202 (790)
                      ++|....  .+                ..-+.|+|+++. |+|.+.....          +.....            ..
T Consensus       148 ~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~-iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np  226 (465)
T d1xfda1         148 RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENP  226 (465)
T ss_dssp             EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCC
T ss_pred             EEecccCcceeeccccchhhhhhhccccceEEECCCCCe-EEEEEecccccceeecccccccccceeeeeeccccCCCCC
Confidence            5543321  12                123458898886 7776643211          000000            12


Q ss_pred             cceeEEEecCCcccccCcCC-ccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCC
Q psy463          203 WDHLTFIDLDDQAGIKDKVP-VPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINE  280 (790)
Q Consensus       203 ~~~l~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~  280 (790)
                      ...|++++++++.......+ ....                 ..+.++..+.|+||++ ++.+.+|.++...+.+||+.+
T Consensus       227 ~~~l~v~d~~~~~~~~~~~~~~~~~-----------------~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~t  289 (465)
T d1xfda1         227 SISLHVIGLNGPTHDLEMMPPDDPR-----------------MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT  289 (465)
T ss_dssp             EEEEEEEESSSSCCCEECCCCCCGG-----------------GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred             ceeEEEEecCCCcEEEEEeccCcCc-----------------cccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCC
Confidence            23789999987653322111 1111                 3466889999999999 788899999999999999999


Q ss_pred             CceeEEEEEeCCCccccc-CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCc-ccCCCcccccCCCeE
Q psy463          281 GTCDVVFSRDLDRGWFEP-FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG-IKDKVPVPLTRGRFT  358 (790)
Q Consensus       281 g~~~~l~~~~~~~~~~~~-~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~-~~~~~~~~lt~~~~~  358 (790)
                      |+++.+..+.. .+|++. ...|.|+|||+.++|+...  +.+|      +.|+|.+.+.++.. ......++||.|.|+
T Consensus       290 g~~~~~~~e~~-~~wv~~~~~~p~~~~dg~~~~fi~~s--e~~g------~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~  360 (465)
T d1xfda1         290 GVCTKKHEDES-EAWLHRQNEEPVFSKDGRKFFFIRAI--PQGG------RGKFYHITVSSSQPNSSNDNIQSITSGDWD  360 (465)
T ss_dssp             CCEEEEEEEEC-SSCCCCCCCCCEECTTSCSEEEEEEE--CCSS------SSCEEEEEEECSSCCSSSCCCCBSCCSSSC
T ss_pred             CcEEEEEEEcC-CceEeccCCceeEccCCCeeEEEEee--eecc------cCceEEEEeccccccCCCceeEEeccCCce
Confidence            99998887653 678764 3579999999998766431  5666      77888876532210 011136899999999


Q ss_pred             EeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCe
Q psy463          359 VTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPE  438 (790)
Q Consensus       359 ~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~  438 (790)
                      |..+++|+++++.|||.++..+|..+|||++++++. +..+||||.+.    ..|.+.+++||||+++++..|+++++|.
T Consensus       361 V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~-~~~~~lt~~~~----~~~~~~~~~~S~~~~y~v~~~s~~~~P~  435 (465)
T d1xfda1         361 VTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN-FNRQCLSCDLV----ENCTYFSASFSHSMDFFLLKCEGPGVPM  435 (465)
T ss_dssp             EEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT-CCCBCSSTTSS----SSCCCCEEEECTTSSEEEEECCSSSSCC
T ss_pred             EEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCC-CcceeeccccC----CCCCEEEEEECCCCCEEEEEeecCCCCe
Confidence            998889999999999999987788899999999873 46789998532    5788899999999999999999999776


Q ss_pred             EEEEecC-CCeEEEeccchhHHHhhccCCC
Q psy463          439 IMLFDKT-GQRLLYWDTNEDLRTALTNITL  467 (790)
Q Consensus       439 i~~~~~~-~~~~~~l~~~~~~~~~~~~~~~  467 (790)
                      +.+++.. ++.+..|+.|..++..++...+
T Consensus       436 ~~~~~~~~~~~~~~Le~N~~l~~~l~~~~~  465 (465)
T d1xfda1         436 VTVHNTTDKKKMFDLETNEHVKKAINDRQM  465 (465)
T ss_dssp             EEEEETTTCCEEEEEECCHHHHHHHHTSCC
T ss_pred             EEEEECCCCCEEEEEcCCHHHHHHHHhccC
Confidence            7777765 4677889999999988877653

>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acylamino-acid-releasing enzyme, C-terminal donain
domain: Acylamino-acid-releasing enzyme, C-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=7.1e-29  Score=247.74  Aligned_cols=250  Identities=20%  Similarity=0.229  Sum_probs=197.6

Q ss_pred             CCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCC
Q psy463          466 TLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSA  545 (790)
Q Consensus       466 ~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~  545 (790)
                      .+...+.+.+++.||.+|.++++.|++    ..++.|+||++|||++.+. ...|.  .....++++||+|+.+|+|+++
T Consensus         8 ~~~~~~~v~~~s~dG~~i~~~l~~p~~----~~~~~Pviv~~HGG~~~~~-~~~~~--~~~~~la~~G~~v~~~d~r~~~   80 (260)
T d2hu7a2           8 SIAGSRLVWVESFDGSRVPTYVLESGR----APTPGPTVVLVHGGPFAED-SDSWD--TFAASLAAAGFHVVMPNYRGST   80 (260)
T ss_dssp             TEEEEEEEEEECTTSCEEEEEEEEETT----SCSSEEEEEEECSSSSCCC-CSSCC--HHHHHHHHHTCEEEEECCTTCS
T ss_pred             ccCceEEEEEECCCCCEEEEEEEeCCC----CCCCceEEEEECCCCccCC-Ccccc--HHHHHHHhhccccccceeeecc
Confidence            344567889999999999999999976    4567899999999877643 33343  3344455689999999999999


Q ss_pred             CChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc
Q psy463          546 LKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY  625 (790)
Q Consensus       546 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~  625 (790)
                      ++|.++.......++..++.|+.++++++.+ .  .+..+++|+|+|+||++++.++..+++ .++++++.+|+.++...
T Consensus        81 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~--~~~~~~~i~g~s~gg~~~~~~~~~~~~-~~~a~i~~~~~~~~~~~  156 (260)
T d2hu7a2          81 GYGEEWRLKIIGDPCGGELEDVSAAARWARE-S--GLASELYIMGYSYGGYMTLCALTMKPG-LFKAGVAGASVVDWEEM  156 (260)
T ss_dssp             SSCHHHHHTTTTCTTTHHHHHHHHHHHHHHH-T--TCEEEEEEEEETHHHHHHHHHHHHSTT-SSSEEEEESCCCCHHHH
T ss_pred             ccccccccccccccchhhhhhhccccccccc-c--cccceeeccccccccccccchhccCCc-ccccccccccchhhhhh
Confidence            9999988888888888889999999999998 3  356899999999999999999998885 79999999998776431


Q ss_pred             cccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463          626 DTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE  705 (790)
Q Consensus       626 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  705 (790)
                      ......             .+..                                 ....+                 ..
T Consensus       157 ~~~~~~-------------~~~~---------------------------------~~~~~-----------------~~  173 (260)
T d2hu7a2         157 YELSDA-------------AFRN---------------------------------FIEQL-----------------TG  173 (260)
T ss_dssp             HHTCCH-------------HHHH---------------------------------HHHHH-----------------HC
T ss_pred             hccccc-------------cccc---------------------------------ccccc-----------------cc
Confidence            110000             0000                                 00000                 01


Q ss_pred             CcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHH
Q psy463          706 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLER  783 (790)
Q Consensus       706 ~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~  783 (790)
                      .....+...++...++++ ++|+|++||+.|.+||+.++..++++|+++++++++++|||++|.+..  +..++++.+.+
T Consensus       174 ~~~~~~~~~~~~~~~~~~-~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~  252 (260)
T d2hu7a2         174 GSREIMRSRSPINHVDRI-KEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVF  252 (260)
T ss_dssp             SCHHHHHHTCGGGCGGGC-CSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHH
T ss_pred             cccccccccchhhccccc-CCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHH
Confidence            122334455566888999 999999999999999999999999999999999999999999999876  77789999999


Q ss_pred             HHHHhhC
Q psy463          784 FLDSCFA  790 (790)
Q Consensus       784 fl~~~l~  790 (790)
                      ||.+||+
T Consensus       253 fl~~hl~  259 (260)
T d2hu7a2         253 FLATQRE  259 (260)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            9999985

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.92  E-value=8.8e-23  Score=222.58  Aligned_cols=376  Identities=19%  Similarity=0.331  Sum_probs=239.6

Q ss_pred             CCceeEeCCCCCceEEEEecC------CceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccce
Q psy463            9 SSSALWFSPSGNNLAYASFDD------NRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNR   82 (790)
Q Consensus         9 ~~~~~~wSPDG~~iaf~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~   82 (790)
                      ....+.|||||++|||.+...      ...++|++.+.+++..       .+.........+.|+||++.+.|....   
T Consensus        63 ~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~-------~l~~~~~~~~~~~~SPDG~~ia~~~~~---  132 (470)
T d2bgra1          63 SINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-------TEERIPNNTQWVTWSPVGHKLAYVWNN---  132 (470)
T ss_dssp             CCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-------CSSCCCTTEEEEEECSSTTCEEEEETT---
T ss_pred             ccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCccc-------ccccCCccccccccccCcceeeEeecc---
Confidence            346888999999999988532      2457888899888511       122222334567899999988886443   


Q ss_pred             eEEEEeeCCCCeeeEEEeecCCCC-------cc------ccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEE
Q psy463           83 ARITRCSINEGTCDVVFSRDLDRG-------WF------EPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFID  149 (790)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~  149 (790)
                       .+.+.+..++....+........       |+      .......|||||++|+|.+.....         . ..+.+.
T Consensus       133 -~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~---------v-~~~~~~  201 (470)
T d2bgra1         133 -DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTE---------V-PLIEYS  201 (470)
T ss_dssp             -EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTT---------C-CEEEEE
T ss_pred             -cceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCc---------C-ceEEEE
Confidence             24455666665544332211111       11      111235799999999998743321         1 222222


Q ss_pred             cCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccc
Q psy463          150 LDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR  229 (790)
Q Consensus       150 ~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~  229 (790)
                      .....      ..    .......+ .+. ..              +.  ......+++++++++............   
T Consensus       202 ~~~~~------~~----~~~~~~~~-~~~-~~--------------g~--~~~~~~~~v~~~~~~~~~~~~~~~~~~---  250 (470)
T d2bgra1         202 FYSDE------SL----QYPKTVRV-PYP-KA--------------GA--VNPTVKFFVVNTDSLSSVTNATSIQIT---  250 (470)
T ss_dssp             ECCST------TC----SSCEEEEE-ECC-BT--------------TS--CCCEEEEEEEEGGGCCSSSCCCEEEEC---
T ss_pred             eeccC------CC----CCCeeeee-ccc-cc--------------cc--cCCcceEEEEECCCcceeeeccccccC---
Confidence            11110      00    00000000 000 00              00  012257788888877643331111110   


Q ss_pred             cceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcce--EEEEEECCCCceeEEE----EEeCCCccccc--CC
Q psy463          230 FTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRA--RITRCSINEGTCDVVF----SRDLDRGWFEP--FD  300 (790)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~--~i~~~~~~~g~~~~l~----~~~~~~~~~~~--~~  300 (790)
                        .  ....    ...+.++..+.|+++++ ++.+.+|.++..  .++.+|..+|....+.    ......+|+..  ..
T Consensus       251 --~--~~~~----~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~  322 (470)
T d2bgra1         251 --A--PASM----LIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPS  322 (470)
T ss_dssp             --C--CHHH----HTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCC
T ss_pred             --C--cccc----CCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeeeccceeecccCC
Confidence              0  0000    04567889999999999 666777776644  4666677777766542    12233556543  25


Q ss_pred             ceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC--
Q psy463          301 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ--  378 (790)
Q Consensus       301 ~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~--  378 (790)
                      .+.|+++++..+++.+   +.+|      +.|||+++.+++.      .++||.+.+.+..+  +++|++.|||.++.  
T Consensus       323 ~~~~~~~~~~~~~~~s---~~dg------~~~ly~~~~~g~~------~~~lt~g~~~v~~~--~~~d~~~iyf~a~~~~  385 (470)
T d2bgra1         323 EPHFTLDGNSFYKIIS---NEEG------YRHICYFQIDKKD------CTFITKGTWEVIGI--EALTSDYLYYISNEYK  385 (470)
T ss_dssp             CCEECTTSSEEEEEEE---CTTS------CEEEEEEETTCSC------CEESCCSSSCEEEE--EEECSSEEEEEESCGG
T ss_pred             CceeeecCCCcEEEEe---ccCc------CceeEEEeccCCc------eeeeccCCeeEEEE--EEECCCEEEEEEecCC
Confidence            7899999988776777   6788      8899999998887      89999999988864  55678899999876  


Q ss_pred             CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC-CeEEEeccchh
Q psy463          379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG-QRLLYWDTNED  457 (790)
Q Consensus       379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~  457 (790)
                      ..|..+|||++++.+. ++.+|||+.+.   ++.+.+.+++|||||+|++..+++++.|-+.+++..+ +.++.|+.|.+
T Consensus       386 ~~p~~~~ly~v~~~g~-~~~~~lt~~~~---~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g~~v~~le~n~~  461 (470)
T d2bgra1         386 GMPGGRNLYKIQLSDY-TKVTCLSCELN---PERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSA  461 (470)
T ss_dssp             GCTTCBEEEEEETTCT-TCEEESSTTTS---TTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEECCHH
T ss_pred             CCcceEEEEEEECCCC-CceeEeccccc---CCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEECCCCCEEEEEeccHH
Confidence            4567789999999873 56788887533   3678899999999999999999999966677777655 56788999999


Q ss_pred             HHHhhccC
Q psy463          458 LRTALTNI  465 (790)
Q Consensus       458 ~~~~~~~~  465 (790)
                      +...++++
T Consensus       462 l~~~l~~~  469 (470)
T d2bgra1         462 LDKMLQNV  469 (470)
T ss_dssp             HHHHHTTE
T ss_pred             HHHHHHhc
Confidence            88877653

>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Prolyl oligopeptidase, C-terminal domain
domain: Prolyl oligopeptidase, C-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.90  E-value=2.3e-22  Score=202.86  Aligned_cols=259  Identities=19%  Similarity=0.147  Sum_probs=176.7

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      ++.+++++.||.+|+++++.|++++  +++++|+||++|||++.+. ...+... ....+...++.++..++++....+.
T Consensus         7 ~e~v~~~s~DG~~i~~~l~~P~~~~--~~~~~P~iv~~HGG~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   82 (280)
T d1qfma2           7 TVQIFYPSKDGTKIPMFIVHKKGIK--LDGSHPAFLYGYGGFNISI-TPNYSVS-RLIFVRHMGGVLAVANIRGGGEYGE   82 (280)
T ss_dssp             EEEEEEECTTSCEEEEEEEEETTCC--CSSCSCEEEECCCCTTCCC-CCCCCHH-HHHHHHHHCCEEEEECCTTSSTTHH
T ss_pred             EEEEEEECCCCCEEEEEEEEcCCCC--CCCCeEEEEEECCCCcccC-CCCcchh-hhhhhcccceeeeccccccccccch
Confidence            5778999999999999999999987  7889999999999988754 2333322 3334444688888888888776666


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY  629 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~  629 (790)
                      ...............++......+... ....+...++++|+|.||.++...+...+. .+++++...++.++.......
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  160 (280)
T d1qfma2          83 TWHKGGILANKQNCFDDFQCAAEYLIK-EGYTSPKRLTINGGSNGGLLVATCANQRPD-LFGCVIAQVGVMDMLKFHKYT  160 (280)
T ss_dssp             HHHHTTSGGGTHHHHHHHHHHHHHHHH-TTSCCGGGEEEEEETHHHHHHHHHHHHCGG-GCSEEEEESCCCCTTTGGGST
T ss_pred             hhhhcccccccccccchhhhhhhhhhh-hcccccccccccccccccchhhhhhhcccc-hhhheeeeccccchhhhcccc
Confidence            655555555555556666666666666 555777899999999999999999988874 889999999988765321110


Q ss_pred             hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                      .....        .  ....        ..              ..    ............                  
T Consensus       161 ~~~~~--------~--~~~~--------~~--------------~~----~~~~~~~~~~~~------------------  186 (280)
T d1qfma2         161 IGHAW--------T--TDYG--------CS--------------DS----KQHFEWLIKYSP------------------  186 (280)
T ss_dssp             TGGGG--------H--HHHC--------CT--------------TS----HHHHHHHHHHCG------------------
T ss_pred             ccccc--------e--eccc--------CC--------------Cc----cccccccccccc------------------
Confidence            00000        0  0000        00              00    000000000000                  


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhc-------CCceEEEEcCCCCCcCCC---cchHHHH
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA-------DIMFQSQTYPDEEHGLIG---VRPHFYH  779 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~-------g~~~~~~~~p~~~H~~~~---~~~~~~~  779 (790)
                       +...++...+... ..|+||+||++|.+||+.++++|+++|+++       ++++++++||+++|++..   +..+...
T Consensus       187 -~~~~s~~~~~~~~-~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~  264 (280)
T d1qfma2         187 -LHNVKLPEADDIQ-YPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVS  264 (280)
T ss_dssp             -GGCCCCCSSTTCC-CCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHH
T ss_pred             -ccccchhhhcccC-CCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHH
Confidence             0011111223333 569999999999999999999999999654       778999999999999875   2235566


Q ss_pred             HHHHHHHHhhC
Q psy463          780 TLERFLDSCFA  790 (790)
Q Consensus       780 ~i~~fl~~~l~  790 (790)
                      .+.+||++||+
T Consensus       265 ~~~~fl~k~L~  275 (280)
T d1qfma2         265 DMFAFIARCLN  275 (280)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHhcC
Confidence            78999999986

>d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: 2,6-dihydropseudooxynicotine hydrolase-like
domain: 2,6-dihydropseudooxynicotine hydrolase
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=99.88  E-value=1.9e-21  Score=201.99  Aligned_cols=241  Identities=17%  Similarity=0.129  Sum_probs=163.4

Q ss_pred             CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC
Q psy463          467 LPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL  546 (790)
Q Consensus       467 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~  546 (790)
                      -...+.+.++. +|.++.++++.|.+     .++.|+||++||..+..   ..+. .+ ...++++||+|+++|+||+|.
T Consensus       103 ~~~~e~v~ip~-dg~~l~g~l~~P~~-----~~~~P~Vi~~hG~~~~~---e~~~-~~-~~~l~~~G~~vl~~D~~G~G~  171 (360)
T d2jbwa1         103 SPPAERHELVV-DGIPMPVYVRIPEG-----PGPHPAVIMLGGLESTK---EESF-QM-ENLVLDRGMATATFDGPGQGE  171 (360)
T ss_dssp             SSCEEEEEEEE-TTEEEEEEEECCSS-----SCCEEEEEEECCSSCCT---TTTH-HH-HHHHHHTTCEEEEECCTTSGG
T ss_pred             CCCeEEeecCc-CCcccceEEEecCC-----CCCceEEEEeCCCCccH---HHHH-HH-HHHHHhcCCEEEEEccccccc
Confidence            34577888887 89999999999974     46789999999987653   2222 23 344556899999999999775


Q ss_pred             ChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc
Q psy463          547 KGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD  626 (790)
Q Consensus       547 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~  626 (790)
                      +.....     .. .....+...+++++.. .+.+|.+||+|+|+||||++++.++..+|  +++++|+.+|+.+.....
T Consensus       172 s~~~~~-----~~-~~~~~~~~~v~d~l~~-~~~vd~~rI~l~G~S~GG~~Al~~A~~~p--ri~a~V~~~~~~~~~~~~  242 (360)
T d2jbwa1         172 MFEYKR-----IA-GDYEKYTSAVVDLLTK-LEAIRNDAIGVLGRSLGGNYALKSAACEP--RLAACISWGGFSDLDYWD  242 (360)
T ss_dssp             GTTTCC-----SC-SCHHHHHHHHHHHHHH-CTTEEEEEEEEEEETHHHHHHHHHHHHCT--TCCEEEEESCCSCSTTGG
T ss_pred             cCcccc-----cc-ccHHHHHHHHHHHHHh-cccccccceeehhhhcccHHHHHHhhcCC--CcceEEEEcccccHHHHh
Confidence            432211     11 1112345567788877 78899999999999999999999999876  689999999887653211


Q ss_pred             ccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCC
Q psy463          627 TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFED  706 (790)
Q Consensus       627 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  706 (790)
                      .....          ....+.      ......                  .......                      
T Consensus       243 ~~~~~----------~~~~~~------~~~~~~------------------~~~~~~~----------------------  266 (360)
T d2jbwa1         243 LETPL----------TKESWK------YVSKVD------------------TLEEARL----------------------  266 (360)
T ss_dssp             GSCHH----------HHHHHH------HHTTCS------------------SHHHHHH----------------------
T ss_pred             hhhhh----------hhHHHH------HhccCC------------------chHHHHH----------------------
Confidence            10000          000000      000000                  0000000                      


Q ss_pred             cchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH
Q psy463          707 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD  786 (790)
Q Consensus       707 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~  786 (790)
                        ......+....+++| ++|+|++||++|. +|++++..+++.+...  .++++++++++|............+.+||.
T Consensus       267 --~~~~~~~~~~~~~~i-~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~--~~~l~~~~~g~H~~~~~~~~~~~~i~dWl~  340 (360)
T d2jbwa1         267 --HVHAALETRDVLSQI-ACPTYILHGVHDE-VPLSFVDTVLELVPAE--HLNLVVEKDGDHCCHNLGIRPRLEMADWLY  340 (360)
T ss_dssp             --HHHHHTCCTTTGGGC-CSCEEEEEETTSS-SCTHHHHHHHHHSCGG--GEEEEEETTCCGGGGGGTTHHHHHHHHHHH
T ss_pred             --HHHhhcchhhhHhhC-CCCEEEEEeCCCC-cCHHHHHHHHHhcCCC--CeEEEEECCCCcCCCcChHHHHHHHHHHHH
Confidence              000111222567889 9999999999998 6999999999988654  458889999999765567788889999999


Q ss_pred             Hhh
Q psy463          787 SCF  789 (790)
Q Consensus       787 ~~l  789 (790)
                      ++|
T Consensus       341 ~~L  343 (360)
T d2jbwa1         341 DVL  343 (360)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            887

>d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetyl xylan esterase-like
domain: Cephalosporin C deacetylase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.88  E-value=1.1e-21  Score=201.76  Aligned_cols=248  Identities=16%  Similarity=0.104  Sum_probs=164.8

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      ..+.++|++.||.+|+++++.|.+     .++.|+||++||+++..   ..|.  .....++++||+|+++|+||+|.++
T Consensus        55 ~~~~v~~~~~dg~~i~~~l~~P~~-----~~~~P~vv~~HG~~~~~---~~~~--~~~~~la~~Gy~vi~~D~rG~G~s~  124 (318)
T d1l7aa_          55 KVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNASY---DGEI--HEMVNWALHGYATFGMLVRGQQRSE  124 (318)
T ss_dssp             EEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCCS---GGGH--HHHHHHHHTTCEEEEECCTTTSSSC
T ss_pred             EEEEEEEECCCCcEEEEEEEecCC-----CCCceEEEEecCCCCCc---cchH--HHHHHHHHCCCEEEEEeeCCCCCCC
Confidence            356788899999999999999984     56789999999988763   2222  2233445689999999999998765


Q ss_pred             hhhHhhhhccCCc--------------cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEE
Q psy463          549 NTLKYAGYRRLGT--------------VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGI  614 (790)
Q Consensus       549 ~~~~~~~~~~~~~--------------~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v  614 (790)
                      ..........++.              ..+.|...+++++.. .+.++..+++++|+|+||.+++..+...+  .+++++
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~-~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~--~~~~~~  201 (318)
T d1l7aa_         125 DTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISS-FDEVDETRIGVTGGSQGGGLTIAAAALSD--IPKAAV  201 (318)
T ss_dssp             CCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHH-STTEEEEEEEEEEETHHHHHHHHHHHHCS--CCSEEE
T ss_pred             CCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHh-cccccCcceEEEeeccccHHHHHHhhcCc--ccceEE
Confidence            5432221111110              125677788888887 78899999999999999999999999876  455666


Q ss_pred             EeCCCCC-cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcch
Q psy463          615 SVAPVTD-WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF  693 (790)
Q Consensus       615 ~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~  693 (790)
                      +..|... +....    ......+  ......+...        ..               .............      
T Consensus       202 ~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~--------~~---------------~~~~~~~~~~~~~------  246 (318)
T d1l7aa_         202 ADYPYLSNFERAI----DVALEQP--YLEINSFFRR--------NG---------------SPETEVQAMKTLS------  246 (318)
T ss_dssp             EESCCSCCHHHHH----HHCCSTT--TTHHHHHHHH--------SC---------------CHHHHHHHHHHHH------
T ss_pred             EeccccccHHHHh----hcccccc--cchhhhhhhc--------cc---------------ccccccccccccc------
Confidence            6655432 21100    0000000  0000000000        00               0000001111111      


Q ss_pred             hcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCc
Q psy463          694 QSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGV  773 (790)
Q Consensus       694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~  773 (790)
                                         .......++++ ++|+|++||++|.+||++++..+++++   +.++++++||+++|.+.  
T Consensus       247 -------------------~~~~~~~~~~i-~~P~Lii~G~~D~~vp~~~~~~~~~~l---~~~~~l~~~~~~gH~~~--  301 (318)
T d1l7aa_         247 -------------------YFDIMNLADRV-KVPVLMSIGLIDKVTPPSTVFAAYNHL---ETKKELKVYRYFGHEYI--  301 (318)
T ss_dssp             -------------------TTCHHHHGGGC-CSCEEEEEETTCSSSCHHHHHHHHHHC---CSSEEEEEETTCCSSCC--
T ss_pred             -------------------ccccccccccC-CCCEEEEEECCCCCcCHHHHHHHHHHc---CCCcEEEEECCCCCCCc--
Confidence                               11223667889 999999999999999999999998876   34679999999999764  


Q ss_pred             chHHHHHHHHHHHHhhC
Q psy463          774 RPHFYHTLERFLDSCFA  790 (790)
Q Consensus       774 ~~~~~~~i~~fl~~~l~  790 (790)
                       +++.+.+++||+++||
T Consensus       302 -~~~~~~~~~fl~~~Lk  317 (318)
T d1l7aa_         302 -PAFQTEKLAFFKQILK  317 (318)
T ss_dssp             -HHHHHHHHHHHHHHHC
T ss_pred             -HHHHHHHHHHHHHhCC
Confidence             5788899999999997

>d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetyl xylan esterase-like
domain: Acetyl xylan esterase TM0077
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=1.2e-21  Score=202.00  Aligned_cols=247  Identities=15%  Similarity=0.058  Sum_probs=163.1

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+.++|++.||.+|++++++|.+    ..+++|+||++||++....   .+  .... .++++||+|+++|+||+|.++.
T Consensus        55 ~~~v~~~s~dG~~l~~~l~~P~~----~~~~~P~Vv~~hG~~~~~~---~~--~~~~-~~a~~G~~v~~~D~rG~G~s~~  124 (322)
T d1vlqa_          55 AYDVTFSGYRGQRIKGWLLVPKL----EEEKLPCVVQYIGYNGGRG---FP--HDWL-FWPSMGYICFVMDTRGQGSGWL  124 (322)
T ss_dssp             EEEEEEECGGGCEEEEEEEEECC----SCSSEEEEEECCCTTCCCC---CG--GGGC-HHHHTTCEEEEECCTTCCCSSS
T ss_pred             EEEEEEECCCCcEEEEEEEeccC----CCCCccEEEEecCCCCCcC---cH--HHHH-HHHhCCCEEEEeeccccCCCCC
Confidence            56788899999999999999986    3467899999999876532   11  1222 3445899999999999887654


Q ss_pred             hhHhhhhcc---------------------CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC
Q psy463          550 TLKYAGYRR---------------------LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN  608 (790)
Q Consensus       550 ~~~~~~~~~---------------------~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~  608 (790)
                      .........                     .....+.|+..+++++.. .+.+|..|++++|+|+||++++.++...+  
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~-~~~~d~~ri~~~G~S~GG~~a~~~~~~~~--  201 (322)
T d1vlqa_         125 KGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAAS-FPQVDQERIVIAGGSQGGGIALAVSALSK--  201 (322)
T ss_dssp             CCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHT-STTEEEEEEEEEEETHHHHHHHHHHHHCS--
T ss_pred             CccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHh-cCCcCchhccccccccchHHHHHHHhcCC--
Confidence            322111100                     001235688889999887 78899999999999999999999888765  


Q ss_pred             ceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHh
Q psy463          609 VFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQH  688 (790)
Q Consensus       609 ~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~  688 (790)
                      .++++++..|........   .......+  ......+...                         .........     
T Consensus       202 ~~~a~v~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~-------------------------~~~~~~~~~-----  246 (322)
T d1vlqa_         202 KAKALLCDVPFLCHFRRA---VQLVDTHP--YAEITNFLKT-------------------------HRDKEEIVF-----  246 (322)
T ss_dssp             SCCEEEEESCCSCCHHHH---HHHCCCTT--HHHHHHHHHH-------------------------CTTCHHHHH-----
T ss_pred             CccEEEEeCCccccHHHH---Hhhccccc--hhhHHhhhhc-------------------------CcchhhhHH-----
Confidence            688888777754322100   00000000  0000000000                         000000011     


Q ss_pred             cCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCC
Q psy463          689 ADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEH  768 (790)
Q Consensus       689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H  768 (790)
                                          ..+...++.+.+.++ ++|+|++||++|.++|++++..+++++   +.++++++||+++|
T Consensus       247 --------------------~~~~~~d~~~~a~~i-~~P~Lv~~G~~D~~vp~~~~~~~~~~~---~~~~~l~~~p~~~H  302 (322)
T d1vlqa_         247 --------------------RTLSYFDGVNFAARA-KIPALFSVGLMDNICPPSTVFAAYNYY---AGPKEIRIYPYNNH  302 (322)
T ss_dssp             --------------------HHHHTTCHHHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHC---CSSEEEEEETTCCT
T ss_pred             --------------------HHhhhhhHHHHHhcC-CCCEEEEEeCCCCCcCHHHHHHHHHHC---CCCeEEEEECCCCC
Confidence                                112223455778899 999999999999999999988887765   55789999999999


Q ss_pred             cCCCcchHHHHHHHHHHHHhhC
Q psy463          769 GLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       769 ~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      ....  ....+..++||+++|+
T Consensus       303 ~~~~--~~~~~~~~~~l~~~l~  322 (322)
T d1vlqa_         303 EGGG--SFQAVEQVKFLKKLFE  322 (322)
T ss_dssp             TTTH--HHHHHHHHHHHHHHHC
T ss_pred             CCcc--ccCHHHHHHHHHHHhC
Confidence            7642  2223456789999885

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.5e-20  Score=201.96  Aligned_cols=251  Identities=23%  Similarity=0.380  Sum_probs=170.0

Q ss_pred             CccceeecCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCC---cCCC--------------------------
Q psy463            1 MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPS---SQYT--------------------------   51 (790)
Q Consensus         1 ~~~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~---~~~~--------------------------   51 (790)
                      +|+||+++...++||||||++|||.+.+++.+..+.++..++...+.   ..+|                          
T Consensus       166 vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~  245 (465)
T d1xfda1         166 LYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM  245 (465)
T ss_dssp             HHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC
T ss_pred             hhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEe
Confidence            48999999999999999999999999988888777776554431110   0000                          


Q ss_pred             --ccccCCCCccccccCCCcce-eEeeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccC-CccccccCCceEEEEe
Q psy463           52 --QAINLREPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPF-DHLRFSSDGKKMLLIL  127 (790)
Q Consensus        52 --~~~~~~~~~~~~~~w~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~spdg~~i~~~~  127 (790)
                        .......++...+.|+++++ .+.|++|.|+...+.+|+..+|+|+.+..+. +.+|++.. ..|.|+|||+.++|+.
T Consensus       246 ~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~-~~~wv~~~~~~p~~~~dg~~~~fi~  324 (465)
T d1xfda1         246 PPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE-SEAWLHRQNEEPVFSKDGRKFFFIR  324 (465)
T ss_dssp             CCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE-CSSCCCCCCCCCEECTTSCSEEEEE
T ss_pred             ccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEc-CCceEeccCCceeEccCCCeeEEEE
Confidence              00111222344567998776 5599999999999999999999999887764 46899754 5799999999998864


Q ss_pred             ecCCCCCCCCCCcCCcEEEEEEcCCcCCc-cCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCcccccee
Q psy463          128 SHNQESDGSTPVDSWDHLTFIDLDDQAGI-KDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHL  206 (790)
Q Consensus       128 ~~~~~~~~~~~~g~~~~l~~~~~~~~~~~-~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  206 (790)
                      ......        ++|+|.+.+...... ..+..++||.|+|+|..+++||.+++. |||.+ +...+      ...||
T Consensus       325 ~se~~g--------~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~-vyF~a-~~~~p------~~~hl  388 (465)
T d1xfda1         325 AIPQGG--------RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNK-IYFLS-TEDLP------RRRQL  388 (465)
T ss_dssp             EECCSS--------SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTE-EEEEE-SSSCT------TCCEE
T ss_pred             eeeecc--------cCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCE-EEEEE-eCCCC------CceEE
Confidence            322211        557887765432211 113468899999999999999998874 55554 33222      23799


Q ss_pred             EEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEE
Q psy463          207 TFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVV  286 (790)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l  286 (790)
                      |+++++++..+     ..||..              ........++.+||||+++...-.+.+.+.+.+++..+++....
T Consensus       389 y~v~l~g~~~~-----~~lt~~--------------~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~  449 (465)
T d1xfda1         389 YSANTVGNFNR-----QCLSCD--------------LVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFD  449 (465)
T ss_dssp             EEECSSTTCCC-----BCSSTT--------------SSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEE
T ss_pred             EEEECCCCCcc-----eeeccc--------------cCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCCCEEEE
Confidence            99999987532     222200              01233456899999999555544444455577777666655443


Q ss_pred             E
Q psy463          287 F  287 (790)
Q Consensus       287 ~  287 (790)
                      .
T Consensus       450 L  450 (465)
T d1xfda1         450 L  450 (465)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Atu1826-like
domain: XC6422 protein
species: Xanthomonas campestris [TaxId: 339]

Probab=99.85  E-value=1.8e-20  Score=177.11  Aligned_cols=209  Identities=16%  Similarity=0.071  Sum_probs=148.9

Q ss_pred             ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463          469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG  548 (790)
Q Consensus       469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g  548 (790)
                      +.+.+++..++| ++.+.+..|...   ...+.+++|++|+.+......+..........++++||.|+.+|+||.|.+.
T Consensus         7 ~~~~l~i~gp~G-~l~~~~~~p~~~---~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~   82 (218)
T d2fuka1           7 ESAALTLDGPVG-PLDVAVDLPEPD---VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSA   82 (218)
T ss_dssp             SCEEEEEEETTE-EEEEEEECCCTT---SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCC
T ss_pred             CceEEEEeCCCc-cEEEEEEcCCCC---CCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCC
Confidence            446678888888 699999888642   2334567788885433211011111223345566799999999999987755


Q ss_pred             hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc
Q psy463          549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~  628 (790)
                      ..+.      .....++|+.++++++.++.   +..+++++|+||||.+++.++.+.   ..+++++.+|..+..     
T Consensus        83 g~~~------~~~~~~~D~~a~~~~~~~~~---~~~~v~l~G~S~Gg~va~~~a~~~---~~~~lil~ap~~~~~-----  145 (218)
T d2fuka1          83 GSFD------HGDGEQDDLRAVAEWVRAQR---PTDTLWLAGFSFGAYVSLRAAAAL---EPQVLISIAPPAGRW-----  145 (218)
T ss_dssp             SCCC------TTTHHHHHHHHHHHHHHHHC---TTSEEEEEEETHHHHHHHHHHHHH---CCSEEEEESCCBTTB-----
T ss_pred             CccC------cCcchHHHHHHHHHHHhhcc---cCceEEEEEEcccchhhhhhhccc---ccceEEEeCCcccch-----
Confidence            4322      12346889999999998853   357999999999999999888754   345777777643210     


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                                                                                   .                  
T Consensus       146 -------------------------------------------------------------~------------------  146 (218)
T d2fuka1         146 -------------------------------------------------------------D------------------  146 (218)
T ss_dssp             -------------------------------------------------------------C------------------
T ss_pred             -------------------------------------------------------------h------------------
Confidence                                                                         0                  


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC  788 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~  788 (790)
                               ....++ .+|+|+|||++|..||++++.++++.+.   .+++++++||++|.|....+.+.+.+.+|++++
T Consensus       147 ---------~~~~~~-~~P~Lvi~G~~D~~vp~~~~~~l~~~~~---~~~~l~~i~ga~H~f~~~~~~l~~~~~~~v~~~  213 (218)
T d2fuka1         147 ---------FSDVQP-PAQWLVIQGDADEIVDPQAVYDWLETLE---QQPTLVRMPDTSHFFHRKLIDLRGALQHGVRRW  213 (218)
T ss_dssp             ---------CTTCCC-CSSEEEEEETTCSSSCHHHHHHHHTTCS---SCCEEEEETTCCTTCTTCHHHHHHHHHHHHGGG
T ss_pred             ---------hhcccc-ccceeeEecCCCcCcCHHHHHHHHHHcc---CCceEEEeCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence                     001123 7899999999999999999998876554   356899999999998875567889999999998


Q ss_pred             hC
Q psy463          789 FA  790 (790)
Q Consensus       789 l~  790 (790)
                      |.
T Consensus       214 l~  215 (218)
T d2fuka1         214 LP  215 (218)
T ss_dssp             CS
T ss_pred             cC
Confidence            73

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=2.2e-19  Score=179.46  Aligned_cols=227  Identities=19%  Similarity=0.235  Sum_probs=151.7

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      ..+|+||||||+|||++.+.+...+|.++..++.         ..+++....                            
T Consensus        41 ~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~----------------------------   83 (269)
T d2hqsa1          41 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA---------VRQVASFPR----------------------------   83 (269)
T ss_dssp             EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---------EEEEECCSS----------------------------
T ss_pred             eeeeEECCCCCEEEEEEeeccCcceeeeecccCc---------eeEEeeeec----------------------------
Confidence            4689999999999999999888999999998874         111111100                            


Q ss_pred             CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463           90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF  169 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~  169 (790)
                                          ....+.|||||++|+|.....+.          ..++........      ......+..
T Consensus        84 --------------------~~~~~~~spdg~~i~~~~~~~~~----------~~~~~~~~~~~~------~~~~~~~~~  127 (269)
T d2hqsa1          84 --------------------HNGAPAFSPDGSKLAFALSKTGS----------LNLYVMDLASGQ------IRQVTDGRS  127 (269)
T ss_dssp             --------------------CEEEEEECTTSSEEEEEECTTSS----------CEEEEEETTTCC------EEECCCCSS
T ss_pred             --------------------ccccceecCCCCeeeEeeecCCc----------cceeeccccccc------ceeeeeccc
Confidence                                00135789999999998754432          255555443331      222222222


Q ss_pred             EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEE
Q psy463          170 TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVL  249 (790)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~  249 (790)
                      .... ..+....+. +++.+....         ..+|++++++++.      ..+++                 ......
T Consensus       128 ~~~~-~~~~~~~~~-~~~~~~~~g---------~~~i~~~~~~~~~------~~~~~-----------------~~~~~~  173 (269)
T d2hqsa1         128 NNTE-PTWFPDSQN-LAFTSDQAG---------RPQVYKVNINGGA------PQRIT-----------------WEGSQN  173 (269)
T ss_dssp             CEEE-EEECTTSSE-EEEEECTTS---------SCEEEEEETTSSC------CEECC-----------------CSSSEE
T ss_pred             cccc-ccccccccc-ceecccccC---------CceEeeeeccccc------ceeee-----------------cccccc
Confidence            2221 223333332 444443211         2689999998876      34444                 556778


Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      ..+.|||||+.+++..+..+...|++++..++..+.+... .      ....|.|||||++|+|+..    ..+      
T Consensus       174 ~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~------~~~~p~~SPDG~~i~f~s~----~~~------  236 (269)
T d2hqsa1         174 QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST-F------LDETPSLAPNGTMVIYSSS----QGM------  236 (269)
T ss_dssp             EEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS-S------SCEEEEECTTSSEEEEEEE----ETT------
T ss_pred             cccccccccceeEEEeecCCceeeeEeecccccceEeecC-c------cccceEECCCCCEEEEEEc----CCC------
Confidence            8999999999777766666777899999988876544322 1      1347999999999998765    455      


Q ss_pred             ccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeec
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE  367 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~  367 (790)
                      ..+||+++++++.      .++|+.....+.. ++|||
T Consensus       237 ~~~l~~~~~dg~~------~~~lt~~~g~~~~-p~WSP  267 (269)
T d2hqsa1         237 GSVLNLVSTDGRF------KARLPATDGQVKF-PAWSP  267 (269)
T ss_dssp             EEEEEEEETTSCC------EEECCCSSSEEEE-EEECC
T ss_pred             CcEEEEEECCCCC------EEEEeCCCCcEEe-EEeCC
Confidence            6789999999987      8889987766654 89998

>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Myristoyl-ACP-specific thioesterase
species: Vibrio harveyi [TaxId: 669]

Probab=99.83  E-value=4.1e-20  Score=187.02  Aligned_cols=250  Identities=12%  Similarity=0.061  Sum_probs=153.1

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC-Chh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL-KGN  549 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~-~g~  549 (790)
                      ....++..||..+++|.+.|.+..   .++.|+||++||+++..   ..|. .+. ..++++||.|+.+|+||+++ +..
T Consensus         5 ~~h~~~~~dg~~l~~w~~~p~~~~---~~~~~~Vvi~HG~~~~~---~~~~-~~a-~~L~~~G~~Vi~~D~rGh~G~S~g   76 (302)
T d1thta_           5 IAHVLRVNNGQELHVWETPPKENV---PFKNNTILIASGFARRM---DHFA-GLA-EYLSTNGFHVFRYDSLHHVGLSSG   76 (302)
T ss_dssp             EEEEEEETTTEEEEEEEECCCTTS---CCCSCEEEEECTTCGGG---GGGH-HHH-HHHHTTTCCEEEECCCBCC-----
T ss_pred             eeeEEEcCCCCEEEEEEecCcCCC---CCCCCEEEEeCCCcchH---HHHH-HHH-HHHHHCCCEEEEecCCCCCCCCCC
Confidence            445677889999999999997643   45678999999987762   2332 233 45556899999999999743 322


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY  629 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~  629 (790)
                      .+....    ......|+.++++++.. .   +.++++|+||||||.+++.+|..   ..++++++.+|+.+.....   
T Consensus        77 ~~~~~~----~~~~~~dl~~vi~~l~~-~---~~~~i~lvG~SmGG~ial~~A~~---~~v~~li~~~g~~~~~~~~---  142 (302)
T d1thta_          77 SIDEFT----MTTGKNSLCTVYHWLQT-K---GTQNIGLIAASLSARVAYEVISD---LELSFLITAVGVVNLRDTL---  142 (302)
T ss_dssp             ---CCC----HHHHHHHHHHHHHHHHH-T---TCCCEEEEEETHHHHHHHHHTTT---SCCSEEEEESCCSCHHHHH---
T ss_pred             cccCCC----HHHHHHHHHHHHHhhhc-c---CCceeEEEEEchHHHHHHHHhcc---cccceeEeecccccHHHHH---
Confidence            211111    11347788889999987 3   35789999999999999988863   2578889999987754221   


Q ss_pred             hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                       .+.++..        +...    ....+  ...+....     .. .....+...+......                 
T Consensus       143 -~~~~~~~--------~~~~----~~~~~--~~~~~~~~-----~~-~~~~~~~~~~~~~~~~-----------------  184 (302)
T d1thta_         143 -EKALGFD--------YLSL----PIDEL--PNDLDFEG-----HK-LGSEVFVRDCFEHHWD-----------------  184 (302)
T ss_dssp             -HHHHSSC--------GGGS----CGGGC--CSEEEETT-----EE-EEHHHHHHHHHHTTCS-----------------
T ss_pred             -HHHHhhc--------cchh----hhhhc--cccccccc-----cc-hhhHHHHHHHHHhHHH-----------------
Confidence             1111100        0000    00000  00000000     00 0011111111110000                 


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCc---chHHHHHHHHHH
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGV---RPHFYHTLERFL  785 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~---~~~~~~~i~~fl  785 (790)
                        ...++.+.++++ ++|+|++||++|..||++.++++++.++..  ++++.+++|++|.+..+   ...+++.+..+.
T Consensus       185 --~~~~~~~~~~~i-~~PvLii~G~~D~~V~~~~~~~l~~~i~s~--~~kl~~~~g~~H~l~e~~~~~~~~~~~~~~~~  258 (302)
T d1thta_         185 --TLDSTLDKVANT-SVPLIAFTANNDDWVKQEEVYDMLAHIRTG--HCKLYSLLGSSHDLGENLVVLRNFYQSVTKAA  258 (302)
T ss_dssp             --SHHHHHHHHTTC-CSCEEEEEETTCTTSCHHHHHHHHTTCTTC--CEEEEEETTCCSCTTSSHHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHhhc-CCCEEEEEeCCCCccCHHHHHHHHHhCCCC--CceEEEecCCCcccccChHHHHHHHHHHHHHH
Confidence              011233678889 999999999999999999999999887644  56999999999998752   233445554443

>d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Lipase
domain: Lipase
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=99.83  E-value=8e-20  Score=180.47  Aligned_cols=190  Identities=13%  Similarity=0.073  Sum_probs=144.3

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      ..+.+|.|.+.   ..+++|+||++||+.+..   ..+  .+....++++||+|+++|++|.......            
T Consensus        37 ~~~~ly~P~~~---~~g~~P~Vv~~HG~~g~~---~~~--~~~a~~lA~~Gy~V~~~d~~~~~~~~~~------------   96 (260)
T d1jfra_          37 GGGTIYYPTST---ADGTFGAVVISPGFTAYQ---SSI--AWLGPRLASQGFVVFTIDTNTTLDQPDS------------   96 (260)
T ss_dssp             CCEEEEEESCC---TTCCEEEEEEECCTTCCG---GGT--TTHHHHHHTTTCEEEEECCSSTTCCHHH------------
T ss_pred             cCEEEEEcCCC---CCCCccEEEEECCCCCCH---HHH--HHHHHHHHhCCCEEEEEeeCCCcCCchh------------
Confidence            45778899763   356789999999988763   222  2344556679999999999986544322            


Q ss_pred             chhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCc
Q psy463          563 EIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTF  639 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~  639 (790)
                      ...|+.++++++.+.   .+.+|.+||+++|||+||.+++.++..++  +++++++.+|....                 
T Consensus        97 ~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~--~~~A~v~~~~~~~~-----------------  157 (260)
T d1jfra_          97 RGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT--SLKAAIPLTGWNTD-----------------  157 (260)
T ss_dssp             HHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT--TCSEEEEESCCCSC-----------------
T ss_pred             hHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc--cchhheeeeccccc-----------------
Confidence            246777788888763   24588999999999999999999998775  67788877764211                 


Q ss_pred             cCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhh
Q psy463          640 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNK  719 (790)
Q Consensus       640 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  719 (790)
                                                                                                    ..
T Consensus       158 ------------------------------------------------------------------------------~~  159 (260)
T d1jfra_         158 ------------------------------------------------------------------------------KT  159 (260)
T ss_dssp             ------------------------------------------------------------------------------CC
T ss_pred             ------------------------------------------------------------------------------cc
Confidence                                                                                          11


Q ss_pred             hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhhC
Q psy463          720 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       720 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l~  790 (790)
                      ..++ ++|+|++||+.|.++|+....++......++.++++++++|++|.+.. ....+.+.++.||+.||+
T Consensus       160 ~~~~-~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L~  230 (260)
T d1jfra_         160 WPEL-RTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFID  230 (260)
T ss_dssp             CTTC-CSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHS
T ss_pred             cccc-ccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHHhc
Confidence            2345 899999999999999998765555445556778899999999999877 677888999999999875

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=1.8e-18  Score=172.65  Aligned_cols=225  Identities=17%  Similarity=0.163  Sum_probs=150.8

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      .|+|||||++|+|++....          ..+++.++..++.      ..+++....... ...|+++++. +++.+...
T Consensus        43 sP~wSPDGk~IAf~~~~~~----------~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~spdg~~-i~~~~~~~  104 (269)
T d2hqsa1          43 SPAWSPDGSKLAYVTFESG----------RSALVIQTLANGA------VRQVASFPRHNG-APAFSPDGSK-LAFALSKT  104 (269)
T ss_dssp             EEEECTTSSEEEEEECTTS----------SCEEEEEETTTCC------EEEEECCSSCEE-EEEECTTSSE-EEEEECTT
T ss_pred             eeEECCCCCEEEEEEeecc----------CcceeeeecccCc------eeEEeeeecccc-cceecCCCCe-eeEeeecC
Confidence            5899999999999986444          2389999988774      445544433322 3467777764 55544321


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                      ..         ..++........      .....                 ........+.|+++++.+.++....+...
T Consensus       105 ~~---------~~~~~~~~~~~~------~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  152 (269)
T d2hqsa1         105 GS---------LNLYVMDLASGQ------IRQVT-----------------DGRSNNTEPTWFPDSQNLAFTSDQAGRPQ  152 (269)
T ss_dssp             SS---------CEEEEEETTTCC------EEECC-----------------CCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred             Cc---------cceeeccccccc------ceeee-----------------eccccccccccccccccceecccccCCce
Confidence            11         344444433322      11111                 34455668899999995555544445667


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      |+.++++++....++....      ....+.|||||+.+++...    ..|      ..+|++++..++.      .+.+
T Consensus       153 i~~~~~~~~~~~~~~~~~~------~~~~~~~spdg~~~~~~~~----~~~------~~~i~~~~~~~~~------~~~~  210 (269)
T d2hqsa1         153 VYKVNINGGAPQRITWEGS------QNQDADVSSDGKFMVMVSS----NGG------QQHIAKQDLATGG------VQVL  210 (269)
T ss_dssp             EEEEETTSSCCEECCCSSS------EEEEEEECTTSSEEEEEEE----CSS------CEEEEEEETTTCC------EEEC
T ss_pred             Eeeeecccccceeeecccc------cccccccccccceeEEEee----cCC------ceeeeEeeccccc------ceEe
Confidence            9999999887766554321      1347999999999996554    455      6789999988775      4444


Q ss_pred             cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463          353 TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST  422 (790)
Q Consensus       353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~  422 (790)
                      . ...... .+.|||||++|+|.+..+.  ..+||++++++  +..++|+.       ..+.+..++|||
T Consensus       211 ~-~~~~~~-~p~~SPDG~~i~f~s~~~~--~~~l~~~~~dg--~~~~~lt~-------~~g~~~~p~WSP  267 (269)
T d2hqsa1         211 S-STFLDE-TPSLAPNGTMVIYSSSQGM--GSVLNLVSTDG--RFKARLPA-------TDGQVKFPAWSP  267 (269)
T ss_dssp             C-CSSSCE-EEEECTTSSEEEEEEEETT--EEEEEEEETTS--CCEEECCC-------SSSEEEEEEECC
T ss_pred             e-cCcccc-ceEECCCCCEEEEEEcCCC--CcEEEEEECCC--CCEEEEeC-------CCCcEEeEEeCC
Confidence            3 333333 3899999999999988743  37999999998  67778876       456777899998

>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Heroin esterase
species: Rhodococcus sp. [TaxId: 1831]

Probab=99.80  E-value=9e-19  Score=179.21  Aligned_cols=257  Identities=16%  Similarity=0.105  Sum_probs=153.8

Q ss_pred             ceEEEEEEcCCCc-EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          469 SVEYMSVPIQPNM-EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       469 ~~~~~~~~~~dg~-~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ..+.+++.+.+|. .+.+.+|.|.+    ..++.|+||++|||+......+ ....+...++++.||+|+.+|||..+..
T Consensus        49 ~~~~~~~~~~~g~~~i~~~~~~P~~----~~~~~Pvvv~iHGGG~~~g~~~-~~~~~~~~la~~~G~~V~~vdYrl~pe~  123 (317)
T d1lzla_          49 SLRELSAPGLDGDPEVKIRFVTPDN----TAGPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPET  123 (317)
T ss_dssp             EEEEEEECCSTTCCCEEEEEEEESS----CCSCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTS
T ss_pred             eEEEEEEecCCCCceEEEEEECCCC----CCCCCcEEEEecCccccccccc-ccchHHHhHHhhcCCccccccccccccc
Confidence            3466778888875 79999999986    3467899999999976533222 2334556666667999999999987764


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHh--CCCcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQEN--LPYIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDW  622 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~  622 (790)
                      ...           ..++|+.++++|+.++  ...+|++||+|+|+|.||++++.++.+.+.   ......+...+....
T Consensus       124 ~~~-----------~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (317)
T d1lzla_         124 TFP-----------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD  192 (317)
T ss_dssp             CTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred             ccc-----------ccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhcccccccccccccccccc
Confidence            422           3477888888888653  113788999999999999999888764321   112233333322211


Q ss_pred             ccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          623 IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       623 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                      ......+ ..+...+                                   ....................        . 
T Consensus       193 ~~~~~s~-~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~--------~-  227 (317)
T d1lzla_         193 RLETVSM-TNFVDTP-----------------------------------LWHRPNAILSWKYYLGESYS--------G-  227 (317)
T ss_dssp             TCCSHHH-HHCSSCS-----------------------------------SCCHHHHHHHHHHHHCTTCC--------C-
T ss_pred             ccccccc-ccccccc-----------------------------------hhhhhhhHHHHhhhcccccc--------C-
Confidence            1000000 0000000                                   00000000000000000000        0 


Q ss_pred             CcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----cchHH
Q psy463          703 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----VRPHF  777 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----~~~~~  777 (790)
                        ..........++.........+|+|+++|+.|.  ...+++.++++|+++|+++++++|||++|.+..     ...+.
T Consensus       228 --~~~~~~~~~~~~~~~~~~~~~pp~li~~g~~D~--l~~~~~~~~~~L~~~G~~v~~~~~~g~~H~f~~~~~~~~~~~~  303 (317)
T d1lzla_         228 --PEDPDVSIYAAPSRATDLTGLPPTYLSTMELDP--LRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERG  303 (317)
T ss_dssp             --TTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCT--THHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHH
T ss_pred             --CCCchhccccCchhhhhccCCCCeEEEECCCCC--CHHHHHHHHHHHHHCCCCEEEEEECcCccCCcccCCchHHHHH
Confidence              000000000011011111114899999999995  457899999999999999999999999998763     34466


Q ss_pred             HHHHHHHHHHhhC
Q psy463          778 YHTLERFLDSCFA  790 (790)
Q Consensus       778 ~~~i~~fl~~~l~  790 (790)
                      ...+.+||+++|+
T Consensus       304 ~~~~~~~l~r~Lr  316 (317)
T d1lzla_         304 AAEALTAIRRGLR  316 (317)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhC
Confidence            7888999999986

>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Aclacinomycin methylesterase RdmC
domain: Aclacinomycin methylesterase RdmC
species: Streptomyces purpurascens [TaxId: 1924]

Probab=99.79  E-value=1.8e-18  Score=175.41  Aligned_cols=276  Identities=13%  Similarity=0.082  Sum_probs=153.4

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.+|++..+.+        ...|.||++||++.+   ...|...+...++ ++||.|+++|+||+|.+......     
T Consensus         8 g~~~i~y~~~G~--------~~~p~vvl~HG~~~~---~~~~~~~~~~~l~-~~g~~vi~~D~~G~G~S~~~~~~-----   70 (297)
T d1q0ra_           8 GDVELWSDDFGD--------PADPALLLVMGGNLS---ALGWPDEFARRLA-DGGLHVIRYDHRDTGRSTTRDFA-----   70 (297)
T ss_dssp             TTEEEEEEEESC--------TTSCEEEEECCTTCC---GGGSCHHHHHHHH-TTTCEEEEECCTTSTTSCCCCTT-----
T ss_pred             CCEEEEEEEecC--------CCCCEEEEECCCCcC---hhHHHHHHHHHHH-hCCCEEEEEeCCCCccccccccc-----
Confidence            778899888743        234789999999876   2344333444444 48999999999998876432111     


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                      .....+.|+.+.+..++++++   .+++.++||||||.+++.+|..+|+ +++.++++++..................+.
T Consensus        71 ~~~~~~~~~~~d~~~ll~~l~---~~~~~lvGhS~Gg~~a~~~a~~~P~-~v~~lvli~~~~~~~~~~~~~~~~~~~~~~  146 (297)
T d1q0ra_          71 AHPYGFGELAADAVAVLDGWG---VDRAHVVGLSMGATITQVIALDHHD-RLSSLTMLLGGGLDIDFDANIERVMRGEPT  146 (297)
T ss_dssp             TSCCCHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCCTTCCHHHHHHHHHHTCCC
T ss_pred             ccccccchhhhhhcccccccc---ccceeeccccccchhhhhhhccccc-ceeeeEEEccccccccchhhhHHHhhhhhh
Confidence            111356777666666666443   5789999999999999999999985 888888887764433221111100000000


Q ss_pred             c----cCchhhhhhc-----cccchhhhccC--CcEEEEeecCCCccChhhHHHHHH-HHHhcCcchhcccccCCCCcCC
Q psy463          639 F----EDNLEGYKIA-----ALNNKVDRIRD--KQYLLVHGTMDDNVHFQQSMMLAK-SLQHADIMFQSQRYMGLPTFED  706 (790)
Q Consensus       639 ~----~~~~~~~~~~-----~~~~~~~~~~~--~p~l~~~g~~d~~v~~~~~~~l~~-~l~~~~~~~~~~~~~~~~~~~~  706 (790)
                      .    ..........     ........+..  .......+... ............ .+......      .... ...
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~  218 (297)
T d1q0ra_         147 LDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGV-PFDDAEYARWEERAIDHAGGV------LAEP-YAH  218 (297)
T ss_dssp             SSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSS-CCCHHHHHHHHHHHHHHTTTC------CSCC-CGG
T ss_pred             hhhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccc-cchHHHHHHHHHHhhhhcccc------chhh-hhh
Confidence            0    0000000000     00000000000  00000000000 000111111111 11110000      0000 000


Q ss_pred             cchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463          707 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL  785 (790)
Q Consensus       707 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl  785 (790)
                      ........+....+++| ++|+|+++|++|..+|+..++.+.+.++.    .+++++|++||.+.. .++++.+.|++||
T Consensus       219 ~~~~~~~~~~~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~----~~~~~i~~~gH~~~~e~p~~~~~~i~~~l  293 (297)
T d1q0ra_         219 YSLTLPPPSRAAELREV-TVPTLVIQAEHDPIAPAPHGKHLAGLIPT----ARLAEIPGMGHALPSSVHGPLAEVILAHT  293 (297)
T ss_dssp             GGCCCCCGGGGGGGGGC-CSCEEEEEETTCSSSCTTHHHHHHHTSTT----EEEEEETTCCSSCCGGGHHHHHHHHHHHH
T ss_pred             hhhhhccccchhhhhcc-CCceEEEEeCCCCCCCHHHHHHHHHhCCC----CEEEEECCCCCcchhhCHHHHHHHHHHHH
Confidence            00000112233567889 99999999999999999999888877654    489999999999987 8889999999999


Q ss_pred             HHh
Q psy463          786 DSC  788 (790)
Q Consensus       786 ~~~  788 (790)
                      ++.
T Consensus       294 ~~~  296 (297)
T d1q0ra_         294 RSA  296 (297)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            863

>d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Ccg1/TafII250-interacting factor B (Cib)
domain: Ccg1/TafII250-interacting factor B (Cib)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.7e-19  Score=170.11  Aligned_cols=193  Identities=13%  Similarity=0.001  Sum_probs=131.1

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|..+++....|..     ....|.||++||.+++   ...|...-....++++||.|+++|+||+|.+...   .....
T Consensus        14 ~G~~i~y~~~~~~~-----~~~~~~vvllHG~~~~---~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~---~~~~~   82 (208)
T d1imja_          14 QGQALFFREALPGS-----GQARFSVLLLHGIRFS---SETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEA---AAPAP   82 (208)
T ss_dssp             TTEEECEEEEECSS-----SCCSCEEEECCCTTCC---HHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTS---CCSSC
T ss_pred             CCEEEEEEEecCCC-----CCCCCeEEEECCCCCC---hhHHhhhHHHHHHHHcCCeEEEeecccccCCCCC---Ccccc
Confidence            89999998888853     3456788999999876   2333321112345558999999999997654322   11111


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                      +......   +.+..+.+.   ++..++.|+||||||.+++.++.++|+ .++++|+.+|...-.               
T Consensus        83 ~~~~~~~---~~l~~~~~~---l~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lV~~~p~~~~~---------------  140 (208)
T d1imja_          83 IGELAPG---SFLAAVVDA---LELGPPVVISPSLSGMYSLPFLTAPGS-QLPGFVPVAPICTDK---------------  140 (208)
T ss_dssp             TTSCCCT---HHHHHHHHH---HTCCSCEEEEEGGGHHHHHHHHTSTTC-CCSEEEEESCSCGGG---------------
T ss_pred             cchhhhh---hhhhhcccc---cccccccccccCcHHHHHHHHHHHhhh-hcceeeecCcccccc---------------
Confidence            1111111   223333332   334789999999999999999998885 888888888742100               


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNN  718 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  718 (790)
                             +                                            ..                         .
T Consensus       141 -------~--------------------------------------------~~-------------------------~  144 (208)
T d1imja_         141 -------I--------------------------------------------NA-------------------------A  144 (208)
T ss_dssp             -------S--------------------------------------------CH-------------------------H
T ss_pred             -------c--------------------------------------------cc-------------------------c
Confidence                   0                                            00                         3


Q ss_pred             hhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          719 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       719 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .+.++ ++|+|++||++|..+|...  +..+.    -...++.++|+++|.... +++++.+.+.+||++
T Consensus       145 ~~~~i-~~P~Lii~G~~D~~~~~~~--~~~~~----~~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~  207 (208)
T d1imja_         145 NYASV-KTPALIVYGDQDPMGQTSF--EHLKQ----LPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQG  207 (208)
T ss_dssp             HHHTC-CSCEEEEEETTCHHHHHHH--HHHTT----SSSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred             ccccc-ccccccccCCcCcCCcHHH--HHHHh----CCCCeEEEECCCCCchhhhCHHHHHHHHHHHHhc
Confidence            45567 8999999999999887542  22222    235689999999998665 788999999999985

>d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Carboxylesterase
species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]

Probab=99.79  E-value=6.2e-19  Score=182.80  Aligned_cols=264  Identities=13%  Similarity=0.057  Sum_probs=157.6

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+..++.+.||..|...+|.|.+    ...+.|+||++|||++.....+..........++++|+.|+.+|||.++....
T Consensus        79 ~~~~~i~~~dg~~i~~~iy~P~~----~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~p  154 (358)
T d1jkma_          79 TSTETILGVDGNEITLHVFRPAG----VEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEG  154 (358)
T ss_dssp             EEEEEEECTTSCEEEEEEEEETT----CCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTE
T ss_pred             EEEEEEeCCCCCEEEEEEEecCC----CCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccccc
Confidence            45667888899999999999986    34678999999999775321222222233344455899999999998743211


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC----CCCceEEEEEeCCCCCcccc
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD----PSNVFKCGISVAPVTDWIYY  625 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~----p~~~~~~~v~~~~~~~~~~~  625 (790)
                      +       ......++|+.++++|+.++...+|.+||+|+|.|.||++++.++...    ....+...++..|+.+....
T Consensus       155 e-------~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~  227 (358)
T d1jkma_         155 H-------HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYA  227 (358)
T ss_dssp             E-------CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTT
T ss_pred             c-------CCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccccC
Confidence            1       001145899999999998743346788999999999999997766431    11246678888887654321


Q ss_pred             cccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463          626 DTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE  705 (790)
Q Consensus       626 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  705 (790)
                      ...+..... .      .......                     ..... ......+...           |.......
T Consensus       228 ~~~~~~~~~-~------~~~~~~~---------------------~~~~~-~~~~~~~~~~-----------~~~~~~~~  267 (358)
T d1jkma_         228 WDHERRLTE-L------PSLVEND---------------------GYFIE-NGGMALLVRA-----------YDPTGEHA  267 (358)
T ss_dssp             SCHHHHHHH-C------THHHHTT---------------------TSSSC-HHHHHHHHHH-----------HSSSSTTT
T ss_pred             ccchhhccc-c------cchhccc---------------------ccccc-hhhhhhHHhh-----------cCCccCCc
Confidence            100000000 0      0000000                     00000 0001111000           00000000


Q ss_pred             CcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--------cchHH
Q psy463          706 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--------VRPHF  777 (790)
Q Consensus       706 ~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--------~~~~~  777 (790)
                      .....+...........+  .|+||++|+.|..  ..++..++++|+++|+++++++|||+.|.+..        ..++.
T Consensus       268 ~~p~~~~~~a~~~~~~~l--Pp~li~~g~~D~l--~~e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~  343 (358)
T d1jkma_         268 EDPIAWPYFASEDELRGL--PPFVVAVNELDPL--RDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALEST  343 (358)
T ss_dssp             TCTTTCGGGCCHHHHTTC--CCEEEEEETTCTT--HHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHH
T ss_pred             cCccccccccchhhccCC--CCEEEEECCCCCC--HHHHHHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHH
Confidence            000000011111222333  7999999999965  46889999999999999999999999997632        23467


Q ss_pred             HHHHHHHHHHh
Q psy463          778 YHTLERFLDSC  788 (790)
Q Consensus       778 ~~~i~~fl~~~  788 (790)
                      .+.|..|+..+
T Consensus       344 ~~~i~~Fl~~~  354 (358)
T d1jkma_         344 VRDVAGFAADR  354 (358)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            78888998754

>d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Uncharacterized protein TM1040 2492
species: Silicibacter sp. tm1040 [TaxId: 292414]

Probab=99.77  E-value=9.6e-18  Score=164.47  Aligned_cols=197  Identities=13%  Similarity=0.073  Sum_probs=136.1

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      .+...++......+|.|.+      ++.|+||++|||++.......+  .+....++++||+|+.+|||.++.....   
T Consensus        41 dv~Yg~~~~~~lDiy~P~~------~~~P~vv~iHGG~w~~g~~~~~--~~~a~~l~~~G~~Vv~~~YRl~p~~~~p---  109 (261)
T d2pbla1          41 NLSYGEGDRHKFDLFLPEG------TPVGLFVFVHGGYWMAFDKSSW--SHLAVGALSKGWAVAMPSYELCPEVRIS---  109 (261)
T ss_dssp             EEESSSSTTCEEEEECCSS------SCSEEEEEECCSTTTSCCGGGC--GGGGHHHHHTTEEEEEECCCCTTTSCHH---
T ss_pred             CcCCCCCcCeEEEEeccCC------CCCCeEEEECCCCCccCChhHh--hhHHHHHhcCCceeecccccccccccCc---
Confidence            3443344334445788853      4579999999998754322333  3344445568999999999987764433   


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC-----CceEEEEEeCCCCCccccccc
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS-----NVFKCGISVAPVTDWIYYDTI  628 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~-----~~~~~~v~~~~~~~~~~~~~~  628 (790)
                              ..++|+.++++|+.++.+    .||+|+|||+||+++++++.....     ..+++++..+|+.++......
T Consensus       110 --------~~~~d~~~a~~~~~~~~~----~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (261)
T d2pbla1         110 --------EITQQISQAVTAAAKEID----GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT  177 (261)
T ss_dssp             --------HHHHHHHHHHHHHHHHSC----SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS
T ss_pred             --------hhHHHHHHHHHHHHhccc----CceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhh
Confidence                    458999999999998543    799999999999999888765432     257888899988776432211


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                      +....++..                                                                      .
T Consensus       178 ~~~~~~~~~----------------------------------------------------------------------~  187 (261)
T d2pbla1         178 SMNEKFKMD----------------------------------------------------------------------A  187 (261)
T ss_dssp             TTHHHHCCC----------------------------------------------------------------------H
T ss_pred             hhcccccCC----------------------------------------------------------------------H
Confidence            111111100                                                                      1


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCc
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHG  769 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~  769 (790)
                      ..+...||+..+.+. .+|+|++||++|..++.++++.++++|+     ++.+++|+.+|+
T Consensus       188 ~~~~~~SP~~~~~~~-~~P~li~~G~~D~~~~~~qs~~~~~~l~-----~~~~~~~~~~HF  242 (261)
T d2pbla1         188 DAAIAESPVEMQNRY-DAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHHF  242 (261)
T ss_dssp             HHHHHTCGGGCCCCC-SCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCTT
T ss_pred             HHHHHhCchhhcccC-CCeEEEEEecCCCchHHHHHHHHHHHhC-----CCceEeCCCCch
Confidence            112233444666677 8999999999999999999999999885     367889999994

>d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Carboxylesterase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.77  E-value=5.2e-18  Score=172.41  Aligned_cols=246  Identities=17%  Similarity=0.141  Sum_probs=156.7

Q ss_pred             CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC
Q psy463          467 LPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL  546 (790)
Q Consensus       467 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~  546 (790)
                      ..+++.+++...+| .+...+|.|+.       +.|+||++|||++....... ...+...++++.|+.|+.+|||.+++
T Consensus        53 ~~~~~~~~i~~~~g-~i~~~iy~P~~-------~~P~il~iHGGg~~~g~~~~-~~~~~~~l~~~~g~~Vv~v~Yrlap~  123 (311)
T d1jjia_          53 VERVEDRTIKGRNG-DIRVRVYQQKP-------DSPVLVYYHGGGFVICSIES-HDALCRRIARLSNSTVVSVDYRLAPE  123 (311)
T ss_dssp             CSEEEEEEEEETTE-EEEEEEEESSS-------SEEEEEEECCSTTTSCCTGG-GHHHHHHHHHHHTSEEEEEECCCTTT
T ss_pred             cceEEEEEEeCCCC-cEEEEEEcCCC-------CceEEEEEcCCCCccCChhh-hhhhhhhhhhcCCcEEEEeccccccc
Confidence            34567788888777 78999999852       35999999999875332222 22355566676799999999999876


Q ss_pred             ChhhhHhhhhccCCccchhHHHHHHHHHHHhC--CCcCCCceEEEEechHHHHHHHHHhc---CCCCceEEEEEeCCCCC
Q psy463          547 KGNTLKYAGYRRLGTVEIYDQINVTRYLQENL--PYIDKTRTAIWGWSYGGYATGLALAL---DPSNVFKCGISVAPVTD  621 (790)
Q Consensus       547 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~d~~ri~i~G~S~GG~~a~~~a~~---~p~~~~~~~v~~~~~~~  621 (790)
                      ...+           ..++|+.++++|+.++.  ..+|++||+|+|+|.||++++.++..   .......+.++..|+.+
T Consensus       124 ~~~p-----------~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~  192 (311)
T d1jjia_         124 HKFP-----------AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVN  192 (311)
T ss_dssp             SCTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCC
T ss_pred             cccc-----------hhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceee
Confidence            5433           34788888999887631  24788999999999999988776533   22346778889999877


Q ss_pred             cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463          622 WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL  701 (790)
Q Consensus       622 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~  701 (790)
                      ............-+..  ...                                  ................         
T Consensus       193 ~~~~~~~~~~~~~~~~--~~~----------------------------------~~~~~~~~~~~~~~~~---------  227 (311)
T d1jjia_         193 FVAPTPSLLEFGEGLW--ILD----------------------------------QKIMSWFSEQYFSREE---------  227 (311)
T ss_dssp             SSSCCHHHHHTSSSCS--SCC----------------------------------HHHHHHHHHHHCSSGG---------
T ss_pred             eccCcccccccccccc--ccc----------------------------------HHHhhhhhhhcccccc---------
Confidence            5432111110000000  000                                  0000000000000000         


Q ss_pred             CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cch
Q psy463          702 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRP  775 (790)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~  775 (790)
                            .......+++....+- .+|+||++|+.|..+  .++..++++|+++|+++++++|||++|.+..      ...
T Consensus       228 ------~~~~~~~sp~~~~~~~-~pP~li~~g~~D~l~--d~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~  298 (311)
T d1jjia_         228 ------DKFNPLASVIFADLEN-LPPALIITAEYDPLR--DEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAAR  298 (311)
T ss_dssp             ------GGGCTTTSGGGSCCTT-CCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHH
T ss_pred             ------cccccccchhhccccc-CCCEEEEEcCCCCCh--HHHHHHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHH
Confidence                  0000011222221122 479999999999654  5889999999999999999999999998753      345


Q ss_pred             HHHHHHHHHHH
Q psy463          776 HFYHTLERFLD  786 (790)
Q Consensus       776 ~~~~~i~~fl~  786 (790)
                      +.++.+.+||.
T Consensus       299 ~a~~~i~~fl~  309 (311)
T d1jjia_         299 DAINQIAALLV  309 (311)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhC
Confidence            67788888873

>d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Dienelactone hydrolase
domain: Dienelactone hydrolase
species: Pseudomonas sp., B13 [TaxId: 306]

Probab=99.77  E-value=3.5e-18  Score=165.73  Aligned_cols=207  Identities=14%  Similarity=0.093  Sum_probs=141.6

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +.+++++.||.++.+++..|.      ++++|+||++|+..+..   .. ...+.. .++++||.|+++|+.+.+..+..
T Consensus         4 e~v~~~~~dg~~~~a~~~~P~------~~~~P~vl~~h~~~G~~---~~-~~~~a~-~lA~~Gy~vl~pd~~~~~~~~~~   72 (233)
T d1dina_           4 EGISIQSYDGHTFGALVGSPA------KAPAPVIVIAQEIFGVN---AF-MRETVS-WLVDQGYAAVCPDLYARQAPGTA   72 (233)
T ss_dssp             TTCCEECTTSCEECEEEECCS------SSSEEEEEEECCTTBSC---HH-HHHHHH-HHHHTTCEEEEECGGGGTSTTCB
T ss_pred             eEEEEEcCCCCEEEEEEECCC------CCCceEEEEeCCCCCCC---HH-HHHHHH-HHHhcCCcceeeeeccCCCcCcc
Confidence            346788889999999999995      35789999999776542   11 122333 44558999999998654332211


Q ss_pred             h-----H--hh---hh-ccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          551 L-----K--YA---GY-RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       551 ~-----~--~~---~~-~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      .     .  ..   .. .......+.|+.++++++.+ .+ .+..||+++|+|+||.+++.++.+.   .+.++++..|.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~-~~-~~~~~i~~~G~s~Gg~~a~~~a~~~---~~~~~~~~~~~  147 (233)
T d1dina_          73 LDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARH-QP-YSNGKVGLVGYCLGGALAFLVAAKG---YVDRAVGYYGV  147 (233)
T ss_dssp             CCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHT-ST-TEEEEEEEEEETHHHHHHHHHHHHT---CSSEEEEESCS
T ss_pred             cChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHh-CC-CCCCceEEEEecccccceeeccccc---ccceecccccc
Confidence            0     0  00   00 01111245778888888876 56 4557999999999999999988753   23344443321


Q ss_pred             CCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhccccc
Q psy463          620 TDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYM  699 (790)
Q Consensus       620 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~  699 (790)
                      ..               .                                                    .         
T Consensus       148 ~~---------------~----------------------------------------------------~---------  151 (233)
T d1dina_         148 GL---------------E----------------------------------------------------K---------  151 (233)
T ss_dssp             CG---------------G----------------------------------------------------G---------
T ss_pred             cc---------------c----------------------------------------------------c---------
Confidence            00               0                                                    0         


Q ss_pred             CCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-------
Q psy463          700 GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-------  772 (790)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-------  772 (790)
                                      ....+.++ ++|+|++||++|..+|.+..+.+.+.++ .+.++++++|||++|+|..       
T Consensus       152 ----------------~~~~~~~i-~~Pvl~~~G~~D~~vp~e~~~~~~~~~~-~~~~~~~~~y~ga~HgF~~~~~~~y~  213 (233)
T d1dina_         152 ----------------QLNKVPEV-KHPALFHMGGQDHFVPAPSRQLITEGFG-ANPLLQVHWYEEAGHSFARTSSSGYV  213 (233)
T ss_dssp             ----------------GGGGGGGC-CSCEEEEEETTCTTSCHHHHHHHHHHHT-TCTTEEEEEETTCCTTTTCTTSTTCC
T ss_pred             ----------------chhhhhcc-CCcceeeecccccCCCHHHHHHHHHHHh-cCCCEEEEEECCCCcCCCCCCCccCC
Confidence                            01345567 8999999999999999999888887775 5778999999999999864       


Q ss_pred             --cchHHHHHHHHHHHH
Q psy463          773 --VRPHFYHTLERFLDS  787 (790)
Q Consensus       773 --~~~~~~~~i~~fl~~  787 (790)
                        ..+..++++++||..
T Consensus       214 ~~aa~~a~~r~~~ffa~  230 (233)
T d1dina_         214 ASAAALANERTLDFLAP  230 (233)
T ss_dssp             HHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHHHc
Confidence              123456888888864

>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Tricorn interacting factor F1
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.76  E-value=7.6e-19  Score=177.14  Aligned_cols=267  Identities=14%  Similarity=0.107  Sum_probs=146.5

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      ||.++++..+..+       ...|+||++||+++..   ..|.. ....++ +.||.|+++|+||+|.+.....      
T Consensus        10 ~g~~i~y~~~g~~-------~~~~~iv~lHG~~g~~---~~~~~-~~~~~~-~~~~~vi~~D~~G~G~S~~~~~------   71 (290)
T d1mtza_          10 NGIYIYYKLCKAP-------EEKAKLMTMHGGPGMS---HDYLL-SLRDMT-KEGITVLFYDQFGCGRSEEPDQ------   71 (290)
T ss_dssp             TTEEEEEEEECCS-------SCSEEEEEECCTTTCC---SGGGG-GGGGGG-GGTEEEEEECCTTSTTSCCCCG------
T ss_pred             CCEEEEEEEcCCC-------CCCCeEEEECCCCCch---HHHHH-HHHHHH-HCCCEEEEEeCCCCcccccccc------
Confidence            8999988777532       2347899999998763   22322 222344 3799999999999886543211      


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC-
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP-  637 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~-  637 (790)
                       ....+++..+.+..+++++.  ..+++.++||||||.+++.++.++|+ +++.++..+++..............-..+ 
T Consensus        72 -~~~~~~~~~~~l~~ll~~l~--~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~  147 (290)
T d1mtza_          72 -SKFTIDYGVEEAEALRSKLF--GNEKVFLMGSSYGGALALAYAVKYQD-HLKGLIVSGGLSSVPLTVKEMNRLIDELPA  147 (290)
T ss_dssp             -GGCSHHHHHHHHHHHHHHHH--TTCCEEEEEETHHHHHHHHHHHHHGG-GEEEEEEESCCSBHHHHHHHHHHHHHTSCH
T ss_pred             -ccccccchhhhhhhhhcccc--cccccceecccccchhhhhhhhcChh-hheeeeecccccCcccchhhhhhhhhhhhH
Confidence             11234444444444444221  24689999999999999999999985 89999988887543221110000000000 


Q ss_pred             ------------CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463          638 ------------TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE  705 (790)
Q Consensus       638 ------------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  705 (790)
                                  .....+ .+.............          .....+. ............... .   ....+...
T Consensus       148 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~-~---~~~~~~~~  211 (290)
T d1mtza_         148 KYRDAIKKYGSSGSYENP-EYQEAVNYFYHQHLL----------RSEDWPP-EVLKSLEYAERRNVY-R---IMNGPNEF  211 (290)
T ss_dssp             HHHHHHHHHHHHTCTTCH-HHHHHHHHHHHHHTS----------CSSCCCH-HHHHHHHHHHHSSHH-H---HHTCSBTT
T ss_pred             HHHHHHHHhhhhccccch-hHHHHHHHHhhhhhc----------ccccchH-HHHHHHHHHhhhhhh-h---hhcchhHH
Confidence                        000000 000000000000000          0000000 011111111111100 0   00000000


Q ss_pred             CcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHH
Q psy463          706 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERF  784 (790)
Q Consensus       706 ~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~f  784 (790)
                      .........+....+.++ ++|+|+++|++|..+| ..+..+.+.++.    +++++++++||.++. +++++.+.|.+|
T Consensus       212 ~~~~~~~~~~~~~~~~~i-~~P~l~i~G~~D~~~~-~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~F  285 (290)
T d1mtza_         212 TITGTIKDWDITDKISAI-KIPTLITVGEYDEVTP-NVARVIHEKIAG----SELHVFRDCSHLTMWEDREGYNKLLSDF  285 (290)
T ss_dssp             BCCSTTTTCBCTTTGGGC-CSCEEEEEETTCSSCH-HHHHHHHHHSTT----CEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred             hHhhhhhcccHHHHhhcc-cceEEEEEeCCCCCCH-HHHHHHHHHCCC----CEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence            001111222334567788 9999999999998765 566777766653    488999999999887 889999999999


Q ss_pred             HHHhh
Q psy463          785 LDSCF  789 (790)
Q Consensus       785 l~~~l  789 (790)
                      |.+||
T Consensus       286 L~~h~  290 (290)
T d1mtza_         286 ILKHL  290 (290)
T ss_dssp             HHTCC
T ss_pred             HHHhC
Confidence            99986

>d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: Alpha-amino acid ester hydrolase
species: Xanthomonas citri [TaxId: 346]

Probab=99.76  E-value=4.5e-18  Score=177.57  Aligned_cols=148  Identities=14%  Similarity=0.134  Sum_probs=110.3

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCc--ccccccc----ccchHHHHHhcCCeEEEEEcCCCC
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSS--FQVTERF----SVDWNLYLADNKDIVVAYIDGRNS  544 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~--~~~~~~~----~~~~~~~~~~~~G~~v~~~d~rG~  544 (790)
                      +.+.++.+||++|.+.+|+|.+     .+++|+||+.|+....  .......    ......+.++++||+|+.+|.||.
T Consensus        25 ~~v~i~~rDG~~L~~~v~~P~~-----~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~   99 (381)
T d1mpxa2          25 REVMIPMRDGVKLHTVIVLPKG-----AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGK   99 (381)
T ss_dssp             EEEEEECTTSCEEEEEEEEETT-----CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTS
T ss_pred             EEEEEECCCCCEEEEEEEEeCC-----CCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCcc
Confidence            4578999999999999999974     5689999999864321  0000000    011123445569999999999998


Q ss_pred             CCChhhhHhh-----hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          545 ALKGNTLKYA-----GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       545 ~~~g~~~~~~-----~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      +.++..+...     .....+..++.|..++++|+.+ .+.++..||+++|+|+||++++.+|...|+ .++|+++.+|+
T Consensus       100 g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~-~~~~~~~~vg~~G~SygG~~~~~~a~~~~~-~l~a~v~~~~~  177 (381)
T d1mpxa2         100 YGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVK-NVSESNGKVGMIGSSYEGFTVVMALTNPHP-ALKVAVPESPM  177 (381)
T ss_dssp             TTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHH-HCTTEEEEEEEEEETHHHHHHHHHHTSCCT-TEEEEEEESCC
T ss_pred             CCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhh-cCCcCccceeeecccHHHHHHHHHHhcccc-ccceeeeeccc
Confidence            8876654321     1223344578999999999988 555788899999999999999999987775 89999999999


Q ss_pred             CCcccc
Q psy463          620 TDWIYY  625 (790)
Q Consensus       620 ~~~~~~  625 (790)
                      .++..+
T Consensus       178 ~d~~~~  183 (381)
T d1mpxa2         178 IDGWMG  183 (381)
T ss_dssp             CCTTTT
T ss_pred             cccccc
Confidence            886543

>d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: Meta-cleavage product hydrolase CumD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.76  E-value=9.3e-18  Score=167.44  Aligned_cols=258  Identities=11%  Similarity=0.066  Sum_probs=147.4

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++..+        +. + |.||++||.+++......|.  .....++ .||.|+++|+||+|.+....       
T Consensus        11 ~G~~~~Y~~~--------G~-G-~pvvllHG~~~~~~~~~~~~--~~~~~l~-~~~~vi~~Dl~G~G~S~~~~-------   70 (271)
T d1uk8a_          11 AGVLTNYHDV--------GE-G-QPVILIHGSGPGVSAYANWR--LTIPALS-KFYRVIAPDMVGFGFTDRPE-------   70 (271)
T ss_dssp             TTEEEEEEEE--------CC-S-SEEEEECCCSTTCCHHHHHT--TTHHHHT-TTSEEEEECCTTSTTSCCCT-------
T ss_pred             CCEEEEEEEE--------ee-C-CeEEEECCCCCCccHHHHHH--HHHHHHh-CCCEEEEEeCCCCCCccccc-------
Confidence            8999987765        22 2 56788999876532112222  1223344 69999999999987654321       


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                      ......++....+..+.++.   +.+++.++||||||.+++.++.++|. .++.+++.++..............+...+ 
T Consensus        71 ~~~~~~~~~~~~~~~~~~~l---~~~~~~lvG~S~Gg~ia~~~a~~~p~-~~~~lil~~~~~~~~~~~~~~~~~~~~~~-  145 (271)
T d1uk8a_          71 NYNYSKDSWVDHIIGIMDAL---EIEKAHIVGNAFGGGLAIATALRYSE-RVDRMVLMGAAGTRFDVTEGLNAVWGYTP-  145 (271)
T ss_dssp             TCCCCHHHHHHHHHHHHHHT---TCCSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCCSCCCCCHHHHHHHTCCS-
T ss_pred             cccccccccchhhhhhhhhh---cCCCceEeeccccceeehHHHHhhhc-cchheeecccCCCcccchhhhhhhhhccc-
Confidence            11234667777777777643   45799999999999999999999986 88888877765432211111100000000 


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCc-cChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN-VHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~-v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                         .......     ......          .+.. ...................   ..+...................
T Consensus       146 ---~~~~~~~-----~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  204 (271)
T d1uk8a_         146 ---SIENMRN-----LLDIFA----------YDRSLVTDELARLRYEASIQPGFQ---ESFSSMFPEPRQRWIDALASSD  204 (271)
T ss_dssp             ---CHHHHHH-----HHHHHC----------SCGGGCCHHHHHHHHHHHTSTTHH---HHHHTTSCSSTHHHHHHHCCCH
T ss_pred             ---hhHHHHH-----HHHHHh----------hhcccchhHHHHHHHhhhhchhHH---HHHHhhcchhhhhhhhhccccH
Confidence               0000000     000000          0000 0000001111110000000   0000000000000001111223


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ..+.++ ++|+|+++|++|..+|++.+..+.+.++.    ++++++|++||.++. +++++.+.|.+||++
T Consensus       205 ~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e  270 (271)
T d1uk8a_         205 EDIKTL-PNETLIIHGREDQVVPLSSSLRLGELIDR----AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE  270 (271)
T ss_dssp             HHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCTT----EEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred             HHHHhh-ccceeEEecCCCCCcCHHHHHHHHHhCCC----CEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence            557788 99999999999999999999998887754    489999999998877 899999999999986

>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hypothetical protein TT1662
domain: Hypothetical protein TT1662
species: Thermus thermophilus [TaxId: 274]

Probab=99.76  E-value=9.1e-19  Score=171.34  Aligned_cols=210  Identities=14%  Similarity=0.028  Sum_probs=127.5

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc---chhHHHHHHHHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV---EIYDQINVTRYLQ  575 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~---~~~D~~~~~~~l~  575 (790)
                      ++.|+||++||.++..   ..|.  .....++++||.|+++|++|++.+...............   ...+....+..+.
T Consensus        22 ~~~~~vl~lHG~~~~~---~~~~--~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (238)
T d1ufoa_          22 APKALLLALHGLQGSK---EHIL--ALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVA   96 (238)
T ss_dssp             SCCEEEEEECCTTCCH---HHHH--HTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEeCCCCCCH---HHHH--HHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHh
Confidence            4569999999988763   2222  222345558999999999998764332111110000001   1112222222222


Q ss_pred             HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchh
Q psy463          576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKV  655 (790)
Q Consensus       576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  655 (790)
                      ...+.++..+++++|+|+||++++.++..+|  .++++++..+........    +.  ...   ...            
T Consensus        97 ~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p--~~~~~~~~~~~~~~~~~~----~~--~~~---~~~------------  153 (238)
T d1ufoa_          97 EEAERRFGLPLFLAGGSLGAFVAHLLLAEGF--RPRGVLAFIGSGFPMKLP----QG--QVV---EDP------------  153 (238)
T ss_dssp             HHHHHHHCCCEEEEEETHHHHHHHHHHHTTC--CCSCEEEESCCSSCCCCC----TT--CCC---CCH------------
T ss_pred             hhccccCCceEEEEEecccHHHHHHHHhcCc--chhheeeeeeeccccccc----cc--ccc---ccc------------
Confidence            2234467789999999999999999999877  455555554433321100    00  000   000            


Q ss_pred             hhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCC
Q psy463          656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTM  735 (790)
Q Consensus       656 ~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~  735 (790)
                                               ... .+...+..                         ....+..++|+|++||++
T Consensus       154 -------------------------~~~-~~~~~~~~-------------------------~~~~~~~~~P~li~~G~~  182 (238)
T d1ufoa_         154 -------------------------GVL-ALYQAPPA-------------------------TRGEAYGGVPLLHLHGSR  182 (238)
T ss_dssp             -------------------------HHH-HHHHSCGG-------------------------GCGGGGTTCCEEEEEETT
T ss_pred             -------------------------ccc-chhhhhhh-------------------------hhhhhhcCCCeEEEEcCC
Confidence                                     000 00011111                         222233278999999999


Q ss_pred             CcccchhhhHHHHHHHHhcCCc--eEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          736 DDNVHFQQSMMLAKSLQHADIM--FQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       736 D~~v~~~~~~~l~~~l~~~g~~--~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      |..||++++..++++|++.+.+  +++.++||++|.+.   .+.++.+.+||.++|+
T Consensus       183 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~---~~~~~~~~~f~~~~l~  236 (238)
T d1ufoa_         183 DHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLT---PLMARVGLAFLEHWLE  236 (238)
T ss_dssp             CTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCC---HHHHHHHHHHHHHHHH
T ss_pred             CCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccC---HHHHHHHHHHHHHHhc
Confidence            9999999999999999998874  67889999999874   3567788889988873

>d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Carboxylesterase
species: Alicyclobacillus acidocaldarius [TaxId: 405212]

Probab=99.75  E-value=8.2e-18  Score=171.32  Aligned_cols=254  Identities=16%  Similarity=0.131  Sum_probs=156.0

Q ss_pred             CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       468 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ..++.+++.. +|.++.+.+|+|++.    .+++|+||++|||+........ ...+...++.+.++.|+.+|||..+..
T Consensus        44 ~~~~~~~~~~-~g~~i~~~~y~P~~~----~~~~Pvvv~iHGGg~~~g~~~~-~~~~~~~~a~~~~~~v~~v~Yrl~p~~  117 (308)
T d1u4na_          44 AEVREFDMDL-PGRTLKVRMYRPEGV----EPPYPALVYYHGGGWVVGDLET-HDPVCRVLAKDGRAVVFSVDYRLAPEH  117 (308)
T ss_dssp             SEEEEEEEEE-TTEEEEEEEEECTTC----CSSEEEEEEECCSTTTSCCTTT-THHHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred             CcEEEEEEec-CCceEEEEEEecccc----CCCCCEEEEEecCeeeeecccc-ccchhhhhhhccccccccccccccccc
Confidence            3456666766 788999999999863    4579999999999765332222 223455566655678999999987654


Q ss_pred             hhhhHhhhhccCCccchhHHHHHHHHHHHhC--CCcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCc
Q psy463          548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENL--PYIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDW  622 (790)
Q Consensus       548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~  622 (790)
                      ...           ...+|+.++++|+.++.  ..+|++||+|+|+|.||++++.++.....   ....+.....+..+.
T Consensus       118 ~~p-----------~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (308)
T d1u4na_         118 KFP-----------AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY  186 (308)
T ss_dssp             CTT-----------HHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCC
T ss_pred             ccc-----------cccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccccccccccc
Confidence            332           45789999999998742  24788999999999999999887764331   133445555555433


Q ss_pred             ccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463          623 IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP  702 (790)
Q Consensus       623 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~  702 (790)
                      ..............                                   .....................          
T Consensus       187 ~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~----------  221 (308)
T d1u4na_         187 DPAHPPASIEENAE-----------------------------------GYLLTGGMSLWFLDQYLNSLE----------  221 (308)
T ss_dssp             CTTSCCHHHHHTSS-----------------------------------SSSSCHHHHHHHHHHHCSSGG----------
T ss_pred             ccccccchhhhccc-----------------------------------cccccchhhhhhhhcccCccc----------
Confidence            21100000000000                                   000000000000000000000          


Q ss_pred             CcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cchH
Q psy463          703 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRPH  776 (790)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~~  776 (790)
                          .... ...++....+.....|+||+||+.|..+  .++..++++|+++|+++++++|||++|++..      ...+
T Consensus       222 ----~~~~-~~~s~~~~~d~~~~Pp~li~~g~~D~l~--~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~  294 (308)
T d1u4na_         222 ----ELTH-PWFSPVLYPDLSGLPPAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATK  294 (308)
T ss_dssp             ----GGGC-TTTCGGGCSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHH
T ss_pred             ----cccc-hhhhhhhchhhcCCCCeeEEecCcCCch--HHHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHH
Confidence                0000 0000001111110368999999999654  5889999999999999999999999998753      3457


Q ss_pred             HHHHHHHHHHHhhC
Q psy463          777 FYHTLERFLDSCFA  790 (790)
Q Consensus       777 ~~~~i~~fl~~~l~  790 (790)
                      .++.+.+||++.|+
T Consensus       295 ~~~~~~~fl~~~La  308 (308)
T d1u4na_         295 ALVRIAEKLRDALA  308 (308)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhhC
Confidence            88999999999874

>d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain
species: Lactococcus lactis [TaxId: 1358]

Probab=99.75  E-value=5.4e-17  Score=170.78  Aligned_cols=228  Identities=16%  Similarity=0.140  Sum_probs=144.3

Q ss_pred             HHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC--------------CCceEEEEec
Q psy463          527 YLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID--------------KTRTAIWGWS  592 (790)
Q Consensus       527 ~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d--------------~~ri~i~G~S  592 (790)
                      ++++++||+|+.+|.||+++++..+.     .++..+.+|..++++|+..+ ...+              ..||+++|+|
T Consensus       130 ~~~~~~GYavv~~D~RG~g~S~G~~~-----~~~~~e~~D~~~~IeWl~~~-~~~~~~~~~~~~~~q~WsnGkVGm~G~S  203 (405)
T d1lnsa3         130 DYFLTRGFASIYVAGVGTRSSDGFQT-----SGDYQQIYSMTAVIDWLNGR-ARAYTSRKKTHEIKASWANGKVAMTGKS  203 (405)
T ss_dssp             HHHHTTTCEEEEECCTTSTTSCSCCC-----TTSHHHHHHHHHHHHHHTTS-SCEESSTTCCCEECCTTEEEEEEEEEET
T ss_pred             HHHHhCCCEEEEECCCCCCCCCCccc-----cCChhhhhhHHHHHHHHHhc-ccccccccccccccccccCCeeEEEecC
Confidence            44556999999999999988776542     23335688999999999762 2121              2489999999


Q ss_pred             hHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc----CCCCccCchhhhhhccccchhhhccCCcEEEEee
Q psy463          593 YGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM----GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHG  668 (790)
Q Consensus       593 ~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g  668 (790)
                      |||++++.+|...|+ .++|++..+++.++...  .+....+    +..  .............    ..          
T Consensus       204 Y~G~~q~~aA~~~pp-~LkAivp~~~~~d~y~~--~~~~G~~~~~~~~~--~~~~~~~~~~~~~----~~----------  264 (405)
T d1lnsa3         204 YLGTMAYGAATTGVE-GLELILAEAGISSWYNY--YRENGLVRSPGGFP--GEDLDVLAALTYS----RN----------  264 (405)
T ss_dssp             HHHHHHHHHHTTTCT-TEEEEEEESCCSBHHHH--HBSSSSBCCCTTCT--TCCHHHHHHHHCG----GG----------
T ss_pred             HHHHHHHHHHhcCCc-cceEEEecCccccHHHH--hhcCCccccccchh--hhhhhhhhccccc----cc----------
Confidence            999999999998775 89999999999886421  0000000    000  0000000000000    00          


Q ss_pred             cCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHH
Q psy463          669 TMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLA  748 (790)
Q Consensus       669 ~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~  748 (790)
                       .+ ....................      ............|...++...+++| ++|+|+++|..|..+++.++.+++
T Consensus       265 -~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~d~~w~~~s~~~~~~~I-~vP~L~i~Gw~D~~v~~~~~~~~y  335 (405)
T d1lnsa3         265 -LD-GADFLKGNAEYEKRLAEMTA------ALDRKSGDYNQFWHDRNYLINTDKV-KADVLIVHGLQDWNVTPEQAYNFW  335 (405)
T ss_dssp             -GS-HHHHHHHHHHHHHHHHHHHH------HHCTTTCCCCHHHHTTBGGGGGGGC-CSEEEEEEETTCCSSCTHHHHHHH
T ss_pred             -cc-cchhhhchhhhhhccchhhh------hhhhccccchhhhhhcChhhhhhcC-CCCEEEEEeccCCCCCHHHHHHHH
Confidence             00 00000000011000000000      0001112334667788888999999 999999999999999999999999


Q ss_pred             HHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463          749 KSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       749 ~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~  790 (790)
                      ++++. +.+.++++.|+ +|....  ....+.+.+++||+++||
T Consensus       336 ~al~~-~~~~~Lilgpw-~H~~~~~~~~~d~~~~~~~wFD~~Lk  377 (405)
T d1lnsa3         336 KALPE-GHAKHAFLHRG-AHIYMNSWQSIDFSETINAYFVAKLL  377 (405)
T ss_dssp             HHSCT-TCCEEEEEESC-SSCCCTTBSSCCHHHHHHHHHHHHHT
T ss_pred             HHHHh-CCCcEEEEeCC-CCCCCcccccchHHHHHHHHHHHHhC
Confidence            99974 56778888886 887643  456778899999999986

>d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Atu1826-like
domain: Hypothetical protein Atu1826
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.75  E-value=7.6e-17  Score=154.01  Aligned_cols=208  Identities=17%  Similarity=0.183  Sum_probs=150.5

Q ss_pred             EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH
Q psy463          473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK  552 (790)
Q Consensus       473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~  552 (790)
                      +.+..++| +|++++..|.      ....|++|++||.|......+.-........+.++||.|+.+|+||.+.+...+ 
T Consensus         3 v~i~g~~G-~Le~~~~~~~------~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~-   74 (218)
T d2i3da1           3 VIFNGPAG-RLEGRYQPSK------EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEF-   74 (218)
T ss_dssp             EEEEETTE-EEEEEEECCS------STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC-
T ss_pred             EEEeCCCc-cEEEEEeCCC------CCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCcccc-
Confidence            45777788 7999865443      344589999998653211011111122334456689999999999988754332 


Q ss_pred             hhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhh
Q psy463          553 YAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSER  632 (790)
Q Consensus       553 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~  632 (790)
                           +.+..+.+|..++++|+..+..  ...++.++|+|+||.+++.++.+.+  ...+.++.++......        
T Consensus        75 -----~~~~~e~~d~~aa~~~~~~~~~--~~~~~~~~g~S~G~~~a~~~a~~~~--~~~~~~~~~~~~~~~~--------  137 (218)
T d2i3da1          75 -----DHGAGELSDAASALDWVQSLHP--DSKSCWVAGYSFGAWIGMQLLMRRP--EIEGFMSIAPQPNTYD--------  137 (218)
T ss_dssp             -----CSSHHHHHHHHHHHHHHHHHCT--TCCCEEEEEETHHHHHHHHHHHHCT--TEEEEEEESCCTTTSC--------
T ss_pred             -----ccchhHHHHHHHHHhhhhcccc--cccceeEEeeehHHHHHHHHHHhhc--cccceeeccccccccc--------
Confidence                 3344678999999999987433  3457999999999999999988765  4555555555322100        


Q ss_pred             hcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh
Q psy463          633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK  712 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  712 (790)
                                                                                .                     
T Consensus       138 ----------------------------------------------------------~---------------------  138 (218)
T d2i3da1         138 ----------------------------------------------------------F---------------------  138 (218)
T ss_dssp             ----------------------------------------------------------C---------------------
T ss_pred             ----------------------------------------------------------h---------------------
Confidence                                                                      0                     


Q ss_pred             hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhc-CCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          713 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA-DIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       713 ~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~-g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                           ..+... .+|.|++||+.|..++.....++.+.++.. +...++.++||++|.|....+.+.+.+.+||+++|.
T Consensus       139 -----~~~~~~-~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~g~~~~l~~~v~~~l~~~l~  211 (218)
T d2i3da1         139 -----SFLAPC-PSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDRRLN  211 (218)
T ss_dssp             -----TTCTTC-CSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHHHHHHT
T ss_pred             -----hhcccc-CCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCcCCHHHHHHHHHHHHHHhcC
Confidence                 112233 789999999999999999999999998874 567899999999999987778999999999999874

>d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: Bacterial cocaine esterase N-terminal domain
species: Rhodococcus sp. mb1 [TaxId: 51612]

Probab=99.75  E-value=2.1e-17  Score=171.38  Aligned_cols=285  Identities=15%  Similarity=0.085  Sum_probs=169.7

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +.+.++.+||++|.+.+|+|.     ..+++|+||+.||.......... ......+.++++||+|+.+|.||++.++..
T Consensus         6 ~~v~ipmrDGv~L~~~vy~P~-----~~~~~P~il~~~pyg~~~~~~~~-~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~   79 (347)
T d1ju3a2           6 SNVMVPMRDGVRLAVDLYRPD-----ADGPVPVLLVRNPYDKFDVFAWS-TQSTNWLEFVRDGYAVVIQDTRGLFASEGE   79 (347)
T ss_dssp             EEEEEECTTSCEEEEEEEEEC-----CSSCEEEEEEEESSCTTCCHHHH-TTSCCTHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred             eCeEEECCCCCEEEEEEEEcC-----CCCCEEEEEEEcCCCCccccCcC-cccHHHHHHHHCCCEEEEEeeCCccccCCc
Confidence            457889999999999999997     35689999999985432111111 111122344559999999999999887765


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS  630 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~  630 (790)
                      +..      ......|..++++|+.+ +++.| .||+++|+|+||++++.+|...|+ .++|++..++..++......+.
T Consensus        80 ~~~------~~~~~~d~~d~i~w~~~-q~~~~-grVg~~G~SygG~~~~~~A~~~~~-~l~aiv~~~~~~d~~~~~~~~~  150 (347)
T d1ju3a2          80 FVP------HVDDEADAEDTLSWILE-QAWCD-GNVGMFGVSYLGVTQWQAAVSGVG-GLKAIAPSMASADLYRAPWYGP  150 (347)
T ss_dssp             CCT------TTTHHHHHHHHHHHHHH-STTEE-EEEEECEETHHHHHHHHHHTTCCT-TEEEBCEESCCSCTCCCCCSCT
T ss_pred             ccc------ccchhhhHHHHHHHHHh-hccCC-cceEeeeccccccchhhhhhcccc-cceeeeeccccchhhhhhhhhc
Confidence            422      22445788889999998 78776 699999999999999999987775 8999999999887632111110


Q ss_pred             hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccC-hhhHHHHHHHHHhcCcchhcccc-----------
Q psy463          631 ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH-FQQSMMLAKSLQHADIMFQSQRY-----------  698 (790)
Q Consensus       631 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~-~~~~~~l~~~l~~~~~~~~~~~~-----------  698 (790)
                      .   |... ......+....   .......        ....+.. ......+...+............           
T Consensus       151 g---g~~~-~~~~~~~~~~~---~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (347)
T d1ju3a2         151 G---GALS-VEALLGWSALI---GTGLITS--------RSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIP  215 (347)
T ss_dssp             T---CCCC-HHHHHHHHHHH---HHHHHTT--------SSSCCTTHHHHHHHHHHHHHCHHHHHTCSSTTCCTTHHHHCT
T ss_pred             C---Cccc-hhhHHHHHHHh---hcccccc--------ccccCcchhhHHhhhhhhcccchhhhccCccccccccccchh
Confidence            0   0000 00000000000   0000000        0000000 00000000100000000000000           


Q ss_pred             ---cCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC---
Q psy463          699 ---MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG---  772 (790)
Q Consensus       699 ---~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~---  772 (790)
                         .....-+.....|...++...++++ ++|+|+++|..|..++  .+.+++++++. +.+.++++-|. .|....   
T Consensus       216 ~~~~~~~~~~~~~~~w~~~~~~~~~~~i-~vP~L~i~G~~D~~~~--~~~~~~~~~~~-~~~~~liigpw-~H~~~~~~~  290 (347)
T d1ju3a2         216 WVIDQVVDHPDNDESWQSISLFERLGGL-ATPALITAGWYDGFVG--ESLRTFVAVKD-NADARLVVGPW-SHSNLTGRN  290 (347)
T ss_dssp             HHHHTTTTCCSCCHHHHTTCCHHHHTTC-CCCEEEEEEEECTTHH--HHHHHHHHHTT-TSCEEEEEEEE-ESSCCSSEE
T ss_pred             hHHHHhhhcccchhhhhcCCHHHHhhcC-CCCEEEeccccCCCcc--hhHHHHHHhhc-cCCceEEEcCc-cccCccccc
Confidence               0000112233567777888889999 9999999999997654  56778888764 45678888776 554321   


Q ss_pred             -----------cchHHHHHHHHHHHHhhC
Q psy463          773 -----------VRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       773 -----------~~~~~~~~i~~fl~~~l~  790 (790)
                                 ...++...+++||++|||
T Consensus       291 ~~~~~g~~~~~~~~~~~~~~l~wfD~~LK  319 (347)
T d1ju3a2         291 ADRKFGIAATYPIQEATTMHKAFFDRHLR  319 (347)
T ss_dssp             TTEECCGGGSCCHHHHHHHHHHHHHHHTS
T ss_pred             CCCCCCccccccHHHHHHHHHHHHHHHhC
Confidence                       245677889999999996

>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD)
species: Rhodococcus sp., strain rha1 [TaxId: 1831]

Probab=99.74  E-value=6.6e-18  Score=169.68  Aligned_cols=265  Identities=12%  Similarity=0.070  Sum_probs=141.9

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      ++.++++...-+        ...|+||++||.++.......|..  ....++ ++|.|+++|.||+|.+.....   ...
T Consensus        12 ~~~~~h~~~~G~--------~~~p~ivllHG~~~~~~~~~~~~~--~~~~L~-~~~~vi~~D~~G~G~S~~~~~---~~~   77 (281)
T d1c4xa_          12 GTLASHALVAGD--------PQSPAVVLLHGAGPGAHAASNWRP--IIPDLA-ENFFVVAPDLIGFGQSEYPET---YPG   77 (281)
T ss_dssp             TTSCEEEEEESC--------TTSCEEEEECCCSTTCCHHHHHGG--GHHHHH-TTSEEEEECCTTSTTSCCCSS---CCS
T ss_pred             CCEEEEEEEEec--------CCCCEEEEECCCCCCCcHHHHHHH--HHHHHh-CCCEEEEEeCCCCcccccccc---ccc
Confidence            557788777643        234899999998765321122321  223344 599999999999876543211   000


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                      .......+..+.+..+++++   ..+++.++||||||.+++.+|.++|+ ++++++++++.............+++....
T Consensus        78 ~~~~~~~~~~~~i~~~i~~~---~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvli~~~~~~~~~~~~~~~~~~~~~~  153 (281)
T d1c4xa_          78 HIMSWVGMRVEQILGLMNHF---GIEKSHIVGNSMGGAVTLQLVVEAPE-RFDKVALMGSVGAPMNARPPELARLLAFYA  153 (281)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---TCSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCSSCCSSCCHHHHHHHTGGG
T ss_pred             cchhhHHHhhhhcccccccc---ccccceeccccccccccccccccccc-cccceEEeccccCccccchhHHHHHHHhhh
Confidence            00112333333333333322   34789999999999999999999985 899999888754322111100011100000


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCc-cC--hhhHHHHHHHHHhcCcc-hhcccccCCCCcCCcchhhhhh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN-VH--FQQSMMLAKSLQHADIM-FQSQRYMGLPTFEDNLEGYKIA  714 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~-v~--~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  714 (790)
                       ......+...     ...+.          .+.. .+  ................. .....+...   ..  ......
T Consensus       154 -~~~~~~~~~~-----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~  212 (281)
T d1c4xa_         154 -DPRLTPYREL-----IHSFV----------YDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESM---KA--GMESLV  212 (281)
T ss_dssp             -SCCHHHHHHH-----HHTTS----------SCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHH---SS--CCGGGC
T ss_pred             -hcccchhhhh-----hhhhc----------ccccccchhhhHHHHHhhhcccchhhhhhhhhhhHH---hh--hhhhhc
Confidence             0000000000     00000          0000 00  00000000000000000 000000000   00  000111


Q ss_pred             hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .....+.++ ++|+|+++|++|..+|++.++.+.+.++.    ++++++|++||.++. .++++.+.+.+||+.
T Consensus       213 ~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s  281 (281)
T d1c4xa_         213 IPPATLGRL-PHDVLVFHGRQDRIVPLDTSLYLTKHLKH----AELVVLDRCGHWAQLERWDAMGPMLMEHFRA  281 (281)
T ss_dssp             CCHHHHTTC-CSCEEEEEETTCSSSCTHHHHHHHHHCSS----EEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred             cchhhhhhh-ccceEEEEeCCCCCcCHHHHHHHHHHCCC----CEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence            122456788 99999999999999999999888887654    488999999999887 889999999999973

>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Bromoperoxidase A1
species: Streptomyces aureofaciens [TaxId: 1894]

Probab=99.74  E-value=8.6e-18  Score=167.93  Aligned_cols=261  Identities=13%  Similarity=0.139  Sum_probs=140.5

Q ss_pred             EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh
Q psy463          475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA  554 (790)
Q Consensus       475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~  554 (790)
                      ++++||.++++..+        + .+ |.||++||.+++.   ..|. .+...++ ++||.|+++|+||+|.+....   
T Consensus         3 ~~t~dG~~l~y~~~--------G-~g-~~ivlvHG~~~~~---~~~~-~~~~~l~-~~g~~vi~~D~~G~G~S~~~~---   64 (274)
T d1a8qa_           3 CTTRDGVEIFYKDW--------G-QG-RPVVFIHGWPLNG---DAWQ-DQLKAVV-DAGYRGIAHDRRGHGHSTPVW---   64 (274)
T ss_dssp             EECTTSCEEEEEEE--------C-SS-SEEEEECCTTCCG---GGGH-HHHHHHH-HTTCEEEEECCTTSTTSCCCS---
T ss_pred             EECcCCCEEEEEEE--------C-CC-CeEEEECCCCCCH---HHHH-HHHHHHH-HCCCEEEEEeCCCCccccccc---
Confidence            56779999997765        2 12 5678899998762   3333 2233343 479999999999987654321   


Q ss_pred             hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc
Q psy463          555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM  634 (790)
Q Consensus       555 ~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~  634 (790)
                           ......+..+.+..++++.   ...++.++||||||.+++.++.++++++++.++.+++............... 
T Consensus        65 -----~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~-  135 (274)
T d1a8qa_          65 -----DGYDFDTFADDLNDLLTDL---DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGV-  135 (274)
T ss_dssp             -----SCCSHHHHHHHHHHHHHHT---TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSB-
T ss_pred             -----ccccchhhHHHHHHHHHHh---hhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchh-
Confidence                 1133445544454455433   3578999999999999988766665568998888876543221110000000 


Q ss_pred             CCCCccCchhhhhhc-------cccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc
Q psy463          635 GLPTFEDNLEGYKIA-------ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN  707 (790)
Q Consensus       635 g~~~~~~~~~~~~~~-------~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  707 (790)
                        .  ..........       ........+..      ...............+..........          .....
T Consensus       136 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~  195 (274)
T d1a8qa_         136 --P--DEVFDALKNGVLTERSQFWKDTAEGFFS------ANRPGNKVTQGNKDAFWYMAMAQTIE----------GGVRC  195 (274)
T ss_dssp             --C--HHHHHHHHHHHHHHHHHHHHHHHHHHTT------TTSTTCCCCHHHHHHHHHHHTTSCHH----------HHHHH
T ss_pred             --h--HHHHHHHHhhhhhhhHHHhhhhhhhhhh------ccccchhhhhhHHHHHHHhhhccchh----------hhhhH
Confidence              0  0000000000       00000000000      00000001000000110000000000          00000


Q ss_pred             chhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHH-HHHHHHhcCCceEEEEcCCCCCcCCC---cchHHHHHHHH
Q psy463          708 LEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMM-LAKSLQHADIMFQSQTYPDEEHGLIG---VRPHFYHTLER  783 (790)
Q Consensus       708 ~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~-l~~~l~~~g~~~~~~~~p~~~H~~~~---~~~~~~~~i~~  783 (790)
                      ...+........+.++ ++|+|+++|++|..++.+...+ +.+.++    .++++++|++||+...   +++.+.+.|.+
T Consensus       196 ~~~~~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~  270 (274)
T d1a8qa_         196 VDAFGYTDFTEDLKKF-DIPTLVVHGDDDQVVPIDATGRKSAQIIP----NAELKVYEGSSHGIAMVPGDKEKFNRDLLE  270 (274)
T ss_dssp             HHHHHHCCCHHHHTTC-CSCEEEEEETTCSSSCGGGTHHHHHHHST----TCEEEEETTCCTTTTTSTTHHHHHHHHHHH
T ss_pred             HHHhhccchHHHHHhc-cceeeeeccCCCCCcCHHHHHHHHHHhCC----CCEEEEECCCCCcccccccCHHHHHHHHHH
Confidence            1111222233567788 9999999999999999877644 444433    3589999999998653   67889999999


Q ss_pred             HHHH
Q psy463          784 FLDS  787 (790)
Q Consensus       784 fl~~  787 (790)
                      ||++
T Consensus       271 FL~k  274 (274)
T d1a8qa_         271 FLNK  274 (274)
T ss_dssp             HHTC
T ss_pred             HHCc
Confidence            9974

>d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Putative serine hydrolase Ydr428c
domain: Putative serine hydrolase Ydr428c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=7.4e-17  Score=160.15  Aligned_cols=212  Identities=14%  Similarity=0.047  Sum_probs=128.1

Q ss_pred             CCCccEEEEEcCCCCccccccccccc----hHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHH
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVD----WNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRY  573 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~----~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~  573 (790)
                      .+++|+||++|||++...........    .....+++.||.|+.+|||.++.....           ..++|+.++++|
T Consensus        28 ~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~~-----------~~~~d~~~~~~~   96 (263)
T d1vkha_          28 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNP-----------RNLYDAVSNITR   96 (263)
T ss_dssp             TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTT-----------HHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhhh-----------HHHHhhhhhhhc
Confidence            45679999999987542211111111    122344568999999999987754322           347899999999


Q ss_pred             HHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCc----------------eEEEEEeCCCCCcccccccchhhhcCCC
Q psy463          574 LQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNV----------------FKCGISVAPVTDWIYYDTIYSERYMGLP  637 (790)
Q Consensus       574 l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~----------------~~~~v~~~~~~~~~~~~~~~~~~~~g~~  637 (790)
                      +.++   .+..+|+|+|||+||.+++.++...+...                ..+.+...++.++....           
T Consensus        97 l~~~---~~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  162 (263)
T d1vkha_          97 LVKE---KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELL-----------  162 (263)
T ss_dssp             HHHH---HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHH-----------
T ss_pred             cccc---ccccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchhhh-----------
Confidence            9884   45689999999999999999887654311                11111222211111000           


Q ss_pred             CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463          638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN  717 (790)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  717 (790)
                                ..        .                  .....+....           +...+...............
T Consensus       163 ----------~~--------~------------------~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  195 (263)
T d1vkha_         163 ----------IE--------Y------------------PEYDCFTRLA-----------FPDGIQMYEEEPSRVMPYVK  195 (263)
T ss_dssp             ----------HH--------C------------------GGGHHHHHHH-----------CTTCGGGCCCCHHHHHHHHH
T ss_pred             ----------hh--------c------------------cccchhhhcc-----------cccccccccccccccCcccc
Confidence                      00        0                  0000000000           00000000000000011122


Q ss_pred             hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHH
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLE  782 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~  782 (790)
                      ..+.++ .+|+|++||++|++||++++..|+++|++.|++++++++++++|.......++.+.|.
T Consensus       196 ~~~~~~-~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~~~~~~~~~~~i~  259 (263)
T d1vkha_         196 KALSRF-SIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNGKVAKYIF  259 (263)
T ss_dssp             HHHHHH-TCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGCHHHHHHHH
T ss_pred             cccccc-CCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEECCCCchhhhcChHHHHHHH
Confidence            445667 8999999999999999999999999999999999999999999965444455554443

>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Epoxide hydrolase
domain: Mammalian epoxide hydrolase, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=6.9e-17  Score=165.57  Aligned_cols=279  Identities=13%  Similarity=0.059  Sum_probs=152.7

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .....+++.||.+|++...        +.  .|+||++||.+++   ...|.. .. ..++++||.|+++|+||+|.+..
T Consensus        11 ~~~~~v~~~~g~~i~y~~~--------G~--gp~vlllHG~~~~---~~~~~~-~~-~~L~~~g~~vi~~D~~G~G~S~~   75 (322)
T d1zd3a2          11 MSHGYVTVKPRVRLHFVEL--------GS--GPAVCLCHGFPES---WYSWRY-QI-PALAQAGYRVLAMDMKGYGESSA   75 (322)
T ss_dssp             SEEEEEEEETTEEEEEEEE--------CC--SSEEEEECCTTCC---GGGGTT-HH-HHHHHTTCEEEEEECTTSTTSCC
T ss_pred             CceeEEEECCCCEEEEEEE--------cC--CCeEEEECCCCCC---HHHHHH-HH-HHHHHCCCEEEEecccccccccc
Confidence            3445567778999998765        22  2789999999887   334442 23 34445799999999999876432


Q ss_pred             hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-c-
Q psy463          550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-T-  627 (790)
Q Consensus       550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~-  627 (790)
                      ..      .......++..+.+..++++   ++.+++.++||||||.+++.+|.++|. +++++++.++........ . 
T Consensus        76 ~~------~~~~~~~~~~~~~i~~l~~~---l~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~  145 (322)
T d1zd3a2          76 PP------EIEEYCMEVLCKEMVTFLDK---LGLSQAVFIGHDWGGMLVWYMALFYPE-RVRAVASLNTPFIPANPNMSP  145 (322)
T ss_dssp             CS------CGGGGSHHHHHHHHHHHHHH---HTCSCEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCCCCCCCSSSCH
T ss_pred             cc------ccccccccccchhhhhhhhc---ccccccccccccchHHHHHHHHHhCCc-cccceEEEcccccccccccch
Confidence            21      11113456666667666664   346799999999999999999999986 788877776432211000 0 


Q ss_pred             ---------cchhhhcCCCCccCchhhhhhccccchhhhccC---CcEEEE---------------eecCCCccChhhHH
Q psy463          628 ---------IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD---KQYLLV---------------HGTMDDNVHFQQSM  680 (790)
Q Consensus       628 ---------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~p~l~~---------------~g~~d~~v~~~~~~  680 (790)
                               .....+...+  ........ .........+..   ...+..               .......+......
T Consensus       146 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (322)
T d1zd3a2         146 LESIKANPVFDYQLYFQEP--GVAEAELE-QNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQ  222 (322)
T ss_dssp             HHHHHTCGGGHHHHHTTST--THHHHHHH-HTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHH
T ss_pred             hhhhhccchhhhHHhhhcc--chhhhhhh-hhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHH
Confidence                     0000000000  00000000 000000000000   000000               00000001111111


Q ss_pred             HHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEE
Q psy463          681 MLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQS  760 (790)
Q Consensus       681 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~  760 (790)
                      ...+.+...+.......+       ................++ ++|+|+++|++|..++++..+.+.+.+..    .++
T Consensus       223 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~i-~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~----~~~  290 (322)
T d1zd3a2         223 FYVQQFKKSGFRGPLNWY-------RNMERNWKWACKSLGRKI-LIPALMVTAEKDFVLVPQMSQHMEDWIPH----LKR  290 (322)
T ss_dssp             HHHHHHHHHTTHHHHHTT-------SCHHHHHHHHHTTTTCCC-CSCEEEEEETTCSSSCGGGGTTGGGTCTT----CEE
T ss_pred             HHHHHHhhcccccccccc-------cccccccccchhhhcccC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CEE
Confidence            111221111111000000       000011112222445678 99999999999999999888777665543    488


Q ss_pred             EEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          761 QTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       761 ~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ++++++||.++. .++++.+.|.+||+++
T Consensus       291 ~~i~~~gH~~~~e~p~~v~~~i~~FL~~~  319 (322)
T d1zd3a2         291 GHIEDCGHWTQMDKPTEVNQILIKWLDSD  319 (322)
T ss_dssp             EEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCchHHhCHHHHHHHHHHHHhhc
Confidence            999999998877 7899999999999976

>d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/thioesterase 1
domain: Carboxylesterase
species: Bacillus cereus [TaxId: 1396]

Probab=99.71  E-value=7.8e-17  Score=152.74  Aligned_cols=185  Identities=15%  Similarity=0.083  Sum_probs=128.9

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCc-------cchhHHHHH
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGT-------VEIYDQINV  570 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~-------~~~~D~~~~  570 (790)
                      .+++|+||++||.+++.   ..|. .+ ...++ .++.|++++.......+..+..  ....+.       ...+++...
T Consensus        11 ~~~~P~vi~lHG~g~~~---~~~~-~~-~~~l~-~~~~vv~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   82 (202)
T d2h1ia1          11 DTSKPVLLLLHGTGGNE---LDLL-PL-AEIVD-SEASVLSVRGNVLENGMPRFFR--RLAEGIFDEEDLIFRTKELNEF   82 (202)
T ss_dssp             CTTSCEEEEECCTTCCT---TTTH-HH-HHHHH-TTSCEEEECCSEEETTEEESSC--EEETTEECHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCH---HHHH-HH-HHHhc-cCCceeeecccccCCCCccccc--cCCCCCCchHHHHHHHHHHHHH
Confidence            45679999999987652   2222 22 33444 5888998875422211111000  000111       123445566


Q ss_pred             HHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhcc
Q psy463          571 TRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAA  650 (790)
Q Consensus       571 ~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  650 (790)
                      +..+.++ ..+|..||+++|+|+||.+++.++.++|. .++++++.+|......                          
T Consensus        83 i~~~~~~-~~~d~~~i~~~G~S~Gg~~a~~la~~~~~-~~~~~~~~~~~~~~~~--------------------------  134 (202)
T d2h1ia1          83 LDEAAKE-YKFDRNNIVAIGYSNGANIAASLLFHYEN-ALKGAVLHHPMVPRRG--------------------------  134 (202)
T ss_dssp             HHHHHHH-TTCCTTCEEEEEETHHHHHHHHHHHHCTT-SCSEEEEESCCCSCSS--------------------------
T ss_pred             HHHHHHh-ccccccceeeecccccchHHHHHHHhccc-cccceeeecCCCCccc--------------------------
Confidence            6666663 44899999999999999999999998885 7888888877532100                          


Q ss_pred             ccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEE
Q psy463          651 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLL  730 (790)
Q Consensus       651 ~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Li  730 (790)
                                                               .                         ...... ..|+++
T Consensus       135 -----------------------------------------~-------------------------~~~~~~-~~~~~i  147 (202)
T d2h1ia1         135 -----------------------------------------M-------------------------QLANLA-GKSVFI  147 (202)
T ss_dssp             -----------------------------------------C-------------------------CCCCCT-TCEEEE
T ss_pred             -----------------------------------------c-------------------------cccccc-cchhhc
Confidence                                                     0                         011123 789999


Q ss_pred             EecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          731 VHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       731 i~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      +||++|.+||++.++++++.|+++|.+++++.||+ +|.+.   .+..+.+.+||++.|
T Consensus       148 ~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~~---~~~~~~~~~wl~k~f  202 (202)
T d2h1ia1         148 AAGTNDPICSSAESEELKVLLENANANVTMHWENR-GHQLT---MGEVEKAKEWYDKAF  202 (202)
T ss_dssp             EEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESS-TTSCC---HHHHHHHHHHHHHHC
T ss_pred             ccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC---HHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999997 89874   466889999999864

>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Gastric lipase
domain: Gastric lipase
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=99.71  E-value=1.2e-16  Score=167.72  Aligned_cols=142  Identities=14%  Similarity=0.145  Sum_probs=92.9

Q ss_pred             eEEEEEEcCCCcEEEEEEEe--CCCCCCCCCCCccEEEEEcCCCCccccccccccc----hHHHHHhcCCeEEEEEcCCC
Q psy463          470 VEYMSVPIQPNMEAQVKLFL--PPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD----WNLYLADNKDIVVAYIDGRN  543 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~--P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~----~~~~~~~~~G~~v~~~d~rG  543 (790)
                      .|...+++.||..|..+.+.  +.+..  ..++.|+||++||.+++   ...|...    -....++++||.|+++|+||
T Consensus        27 ~e~h~v~t~DG~~l~~~ri~~~~~~~~--~~~~~~~vlllHG~~~~---~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG  101 (377)
T d1k8qa_          27 AEEYEVVTEDGYILGIDRIPYGRKNSE--NIGRRPVAFLQHGLLAS---ATNWISNLPNNSLAFILADAGYDVWLGNSRG  101 (377)
T ss_dssp             CEEEEEECTTSEEEEEEEECSCSSCCT--TTTTCCEEEEECCTTCC---GGGGSSSCTTTCHHHHHHHTTCEEEECCCTT
T ss_pred             ceEEEEEcCCCCEEEEEEecCCCCCCc--cCCCCCeEEEECCCccc---hhHHhhcCccchHHHHHHHCCCEEEEEcCCC
Confidence            46678889999887765442  22222  44567899999999876   3344321    12344445899999999999


Q ss_pred             CCCChhhhHhhh----hcc--CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC--ceEEEEE
Q psy463          544 SALKGNTLKYAG----YRR--LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN--VFKCGIS  615 (790)
Q Consensus       544 ~~~~g~~~~~~~----~~~--~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~--~~~~~v~  615 (790)
                      +|.+...-....    ...  +.....+|+.++++++++..+   .+++.++||||||.+++.++.++|..  .+...+.
T Consensus       102 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g---~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~  178 (377)
T d1k8qa_         102 NTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTG---QDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYA  178 (377)
T ss_dssp             STTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHC---CSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEE
T ss_pred             CCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcC---CCCEEEEEecchHHHHHHHHHhhhhhhhhceeEee
Confidence            887653211100    000  111235688889999887544   57999999999999999999988752  2334444


Q ss_pred             eCCC
Q psy463          616 VAPV  619 (790)
Q Consensus       616 ~~~~  619 (790)
                      .+|.
T Consensus       179 ~~~~  182 (377)
T d1k8qa_         179 LAPV  182 (377)
T ss_dssp             ESCC
T ss_pred             cccc
Confidence            4443

>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Arylesterase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.71  E-value=4.6e-17  Score=162.02  Aligned_cols=265  Identities=15%  Similarity=0.152  Sum_probs=143.6

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      +|...||.++++..+        + .+ |.||++||++++.   ..|.  .....++++||.|+++|+||+|.+...   
T Consensus         2 ~f~~~dG~~l~y~~~--------G-~g-~~vv~lHG~~~~~---~~~~--~~~~~l~~~g~~vi~~D~~G~G~S~~~---   63 (271)
T d1va4a_           2 TFVAKDGTQIYFKDW--------G-SG-KPVLFSHGWLLDA---DMWE--YQMEYLSSRGYRTIAFDRRGFGRSDQP---   63 (271)
T ss_dssp             EEECTTSCEEEEEEE--------S-SS-SEEEEECCTTCCG---GGGH--HHHHHHHTTTCEEEEECCTTSTTSCCC---
T ss_pred             EEEeECCeEEEEEEE--------c-CC-CeEEEECCCCCCH---HHHH--HHHHHHHhCCCEEEEEecccccccccc---
Confidence            466679999987655        2 22 4577899988763   2333  223445558999999999998765322   


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHH-HHhcCCCCceEEEEEeCCCCCcccccccchhh
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGL-ALALDPSNVFKCGISVAPVTDWIYYDTIYSER  632 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~-~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~  632 (790)
                           ......++....+..+...   ++.+++.++|||+||.+++. ++.++| ++++.++..++..........+...
T Consensus        64 -----~~~~~~~~~~~~~~~~~~~---~~~~~~~~vg~s~gG~~~~~~~a~~~p-~~v~~~v~~~~~~~~~~~~~~~~~~  134 (271)
T d1va4a_          64 -----WTGNDYDTFADDIAQLIEH---LDLKEVTLVGFSMGGGDVARYIARHGS-ARVAGLVLLGAVTPLFGQKPDYPQG  134 (271)
T ss_dssp             -----SSCCSHHHHHHHHHHHHHH---HTCCSEEEEEETTHHHHHHHHHHHHCS-TTEEEEEEESCCCSCCBCBTTBTTS
T ss_pred             -----ccccccccccccceeeeee---cCCCcceeecccccccccccccccccc-ceeeEEEeecccccccccchhhhhh
Confidence                 1123456666666665553   34578999999999877655 455555 5888888887654332111000000


Q ss_pred             hcCCCCccCchhhhhhcccc---chhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463          633 YMGLPTFEDNLEGYKIAALN---NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE  709 (790)
Q Consensus       633 ~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  709 (790)
                      .   .  ......+......   ....... .+.  ...........................          .......
T Consensus       135 ~---~--~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~  196 (271)
T d1va4a_         135 V---P--LDVFARFKTELLKDRAQFISDFN-APF--YGINKGQVVSQGVQTQTLQIALLASLK----------ATVDCVT  196 (271)
T ss_dssp             B---C--HHHHHHHHHHHHHHHHHHHHHHH-HHH--HTGGGTCCCCHHHHHHHHHHHHHSCHH----------HHHHHHH
T ss_pred             h---h--hhHHHHHHHHhhhhhhhhhhhhc-chh--hcccchhhhhhhHHHHHHhhhhhhhhh----------hhhhccc
Confidence            0   0  0000000000000   0000000 000  000000000000000000000000000          0000001


Q ss_pred             hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .+........++++ ++|+|+++|++|..+|++.+.++.+.+..   .++++++|++||.+.. +++++.+.|.+||++
T Consensus       197 ~~~~~~~~~~l~~i-~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k  271 (271)
T d1va4a_         197 AFAETDFRPDMAKI-DVPTLVIHGDGDQIVPFETTGKVAAELIK---GAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR  271 (271)
T ss_dssp             HHHHCCCHHHHHHC-CSCEEEEEETTCSSSCGGGTHHHHHHHST---TCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred             ccchhhhhhhhhhc-ccceeecccCCCCCCCHHHHHHHHHHhCC---CCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence            11122223567788 99999999999999999998887765532   3588999999998876 889999999999974

>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Chloroperoxidase F
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.70  E-value=1.4e-16  Score=158.76  Aligned_cols=265  Identities=15%  Similarity=0.180  Sum_probs=142.6

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      +|.+.||.++++...        + .+ |.||++||.+++   ...|.. .. ..+.++||.|+++|+||+|.+...   
T Consensus         2 ~f~~~dG~~i~y~~~--------G-~g-~pvvllHG~~~~---~~~~~~-~~-~~l~~~~~~vi~~D~~G~G~S~~~---   63 (273)
T d1a8sa_           2 TFTTRDGTQIYYKDW--------G-SG-QPIVFSHGWPLN---ADSWES-QM-IFLAAQGYRVIAHDRRGHGRSSQP---   63 (273)
T ss_dssp             EEECTTSCEEEEEEE--------S-CS-SEEEEECCTTCC---GGGGHH-HH-HHHHHTTCEEEEECCTTSTTSCCC---
T ss_pred             EEEeeCCcEEEEEEE--------C-CC-CeEEEECCCCCC---HHHHHH-HH-HHHHhCCCEEEEEechhcCccccc---
Confidence            578889999988765        2 22 457789999876   333432 23 334447999999999998765422   


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhh
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERY  633 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~  633 (790)
                           .......+..+.+..++...   +..+..++|||+||.+++.++.++++++++.++..++.............. 
T Consensus        64 -----~~~~~~~~~~~~~~~~l~~l---~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~-  134 (273)
T d1a8sa_          64 -----WSGNDMDTYADDLAQLIEHL---DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGG-  134 (273)
T ss_dssp             -----SSCCSHHHHHHHHHHHHHHT---TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTS-
T ss_pred             -----cccccccchHHHHHHHHHhc---CccceeeeeeccCCccchhhhhhhhhhccceeEEEeccccccccccccccc-
Confidence                 11234556666666555533   356788999999887665554444445788777776654322110000000 


Q ss_pred             cCCCCccCchhhhhhcccc---chhhhccCCcEEEEeecCC--CccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463          634 MGLPTFEDNLEGYKIAALN---NKVDRIRDKQYLLVHGTMD--DNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL  708 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~~---~~~~~~~~~p~l~~~g~~d--~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  708 (790)
                        ..  .............   .....+...+.   .....  .....................          ......
T Consensus       135 --~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  197 (273)
T d1a8sa_         135 --LP--MEVFDGIRQASLADRSQLYKDLASGPF---FGFNQPGAKSSAGMVDWFWLQGMAAGHK----------NAYDCI  197 (273)
T ss_dssp             --BC--HHHHHHHHHHHHHHHHHHHHHHHHTTS---SSTTSTTCCCCHHHHHHHHHHHHHSCHH----------HHHHHH
T ss_pred             --ch--hhhhhhHHHHHHHHHHHHHHHHhhhhh---hhcccchhhhhHHHHHHHHHhhcccchh----------hhhhhH
Confidence              00  0000000000000   00000000000   00000  000000000111000000000          000000


Q ss_pred             hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463          709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD  786 (790)
Q Consensus       709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~  786 (790)
                      ..+........++++ ++|+|+++|++|..+|.+.+..+.+.+..   .++++++|++||.++. +++++.+.|.+||+
T Consensus       198 ~~~~~~~~~~~~~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~  272 (273)
T d1a8sa_         198 KAFSETDFTEDLKKI-DVPTLVVHGDADQVVPIEASGIASAALVK---GSTLKIYSGAPHGLTDTHKDQLNADLLAFIK  272 (273)
T ss_dssp             HHHHHCCCHHHHHTC-CSCEEEEEETTCSSSCSTTTHHHHHHHST---TCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred             HHhhhhhhhHHHHhh-ccceEEEecCCCCCCCHHHHHHHHHHhCC---CCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence            111122233567788 99999999999999999988888766532   3588999999999877 88999999999996

>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: Meta cleavage compound hydrolase CarC
species: Janthinobacterium sp. J3 [TaxId: 213804]

Probab=99.70  E-value=4.7e-17  Score=161.92  Aligned_cols=253  Identities=11%  Similarity=0.034  Sum_probs=140.0

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      ||.++++...        +. + |.||++||+++.......|.  .....++ .||.|+++|.||+|.+....       
T Consensus        10 dg~~l~y~~~--------G~-g-~~vvllHG~~~~~~~~~~~~--~~~~~l~-~~~~v~~~D~~G~G~S~~~~-------   69 (268)
T d1j1ia_          10 GGVETRYLEA--------GK-G-QPVILIHGGGAGAESEGNWR--NVIPILA-RHYRVIAMDMLGFGKTAKPD-------   69 (268)
T ss_dssp             TTEEEEEEEE--------CC-S-SEEEEECCCSTTCCHHHHHT--TTHHHHT-TTSEEEEECCTTSTTSCCCS-------
T ss_pred             CCEEEEEEEE--------cC-C-CeEEEECCCCCCccHHHHHH--HHHHHHh-cCCEEEEEcccccccccCCc-------
Confidence            8999987653        22 2 56889999876521111222  1233444 69999999999987654221       


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT  638 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~  638 (790)
                       .....++....+..+++.++ + ..++.++|||+||.+++.++.++|+ +++.+|+.+|........... ...+... 
T Consensus        70 -~~~~~~~~~~~~~~~i~~l~-~-~~~~~liG~S~Gg~ia~~~a~~~p~-~v~~lil~~~~~~~~~~~~~~-~~~~~~~-  143 (268)
T d1j1ia_          70 -IEYTQDRRIRHLHDFIKAMN-F-DGKVSIVGNSMGGATGLGVSVLHSE-LVNALVLMGSAGLVVEIHEDL-RPIINYD-  143 (268)
T ss_dssp             -SCCCHHHHHHHHHHHHHHSC-C-SSCEEEEEEHHHHHHHHHHHHHCGG-GEEEEEEESCCBCCCC-----------CC-
T ss_pred             -cccccccccccchhhHHHhh-h-cccceeeeccccccccchhhccChH-hhheeeecCCCccccccchhh-hhhhhhh-
Confidence             11334555555555555333 2 2579999999999999999999986 899888887643221110000 0000000 


Q ss_pred             ccCchhhhhhccccchhhhccCCcEEEEeecCCCcc-ChhhHHHHHHHHHhcCcc---hhcccccCCCCcCCcchhhhhh
Q psy463          639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV-HFQQSMMLAKSLQHADIM---FQSQRYMGLPTFEDNLEGYKIA  714 (790)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v-~~~~~~~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  714 (790)
                        .......     .....+.          .+... ..................   .......        .......
T Consensus       144 --~~~~~~~-----~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~  198 (268)
T d1j1ia_         144 --FTREGMV-----HLVKALT----------NDGFKIDDAMINSRYTYATDEATRKAYVATMQWI--------REQGGLF  198 (268)
T ss_dssp             --SCHHHHH-----HHHHHHS----------CTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHH--------HHHTSSB
T ss_pred             --hhhhhhH-----HHHHHHh----------hhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhh--------hcccccc
Confidence              0000000     0000000          00000 000000000000000000   0000000        0000000


Q ss_pred             hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .....+.++ ++|+|+++|++|..+|++.+..+.+.+++    ++++++|++||.++. +++++.+.|.+||.+
T Consensus       199 ~~~~~l~~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~  267 (268)
T d1j1ia_         199 YDPEFIRKV-QVPTLVVQGKDDKVVPVETAYKFLDLIDD----SWGYIIPHCGHWAMIEHPEDFANATLSFLSL  267 (268)
T ss_dssp             CCHHHHTTC-CSCEEEEEETTCSSSCHHHHHHHHHHCTT----EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred             chhhhHhhC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence            112456788 99999999999999999999888887754    489999999999877 889999999999975

>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Chloroperoxidase L
species: Streptomyces lividans [TaxId: 1916]

Probab=99.70  E-value=5.7e-17  Score=161.89  Aligned_cols=266  Identities=15%  Similarity=0.118  Sum_probs=142.7

Q ss_pred             EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      ++++.||.+|++..+.|++        .|+||++||.+++.   ..|.. ....++ ++||.|+++|+||+|.+....  
T Consensus         2 ~i~~~dG~~l~y~~~G~~~--------~~~vv~lHG~~~~~---~~~~~-~~~~l~-~~g~~vi~~D~~G~G~s~~~~--   66 (275)
T d1a88a_           2 TVTTSDGTNIFYKDWGPRD--------GLPVVFHHGWPLSA---DDWDN-QMLFFL-SHGYRVIAHDRRGHGRSDQPS--   66 (275)
T ss_dssp             EEECTTSCEEEEEEESCTT--------SCEEEEECCTTCCG---GGGHH-HHHHHH-HTTCEEEEECCTTSTTSCCCS--
T ss_pred             EEEecCCCEEEEEEecCCC--------CCeEEEECCCCCCH---HHHHH-HHHHHH-hCCCEEEEEeccccccccccc--
Confidence            5678899999999987642        25688999998762   33431 233344 479999999999987654221  


Q ss_pred             hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEech-HHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc----
Q psy463          554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSY-GGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI----  628 (790)
Q Consensus       554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~-GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~----  628 (790)
                            .....++..+.+..++++   ++.+++.++|||+ ||.++..++.++|+ +++.++++++..........    
T Consensus        67 ------~~~~~~~~~~~~~~~l~~---l~~~~~~~vg~s~~G~~~~~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~  136 (275)
T d1a88a_          67 ------TGHDMDTYAADVAALTEA---LDLRGAVHIGHSTGGGEVARYVARAEPG-RVAKAVLVSAVPPVMVKSDTNPDG  136 (275)
T ss_dssp             ------SCCSHHHHHHHHHHHHHH---HTCCSEEEEEETHHHHHHHHHHHHSCTT-SEEEEEEESCCCSCCBCBTTBTTS
T ss_pred             ------cccccccccccccccccc---ccccccccccccccccchhhcccccCcc-hhhhhhhhcccccccccchhhhhh
Confidence                  113455555555555553   3356888899887 55566777787875 78888877764322111000    


Q ss_pred             chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeec-CCCccChhh-HHHHHHHHHhcCcchhcccccCCCCcCC
Q psy463          629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGT-MDDNVHFQQ-SMMLAKSLQHADIMFQSQRYMGLPTFED  706 (790)
Q Consensus       629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~-~d~~v~~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~  706 (790)
                      .....+     .................... .+.   ... .+....... ..............          ....
T Consensus       137 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  197 (275)
T d1a88a_         137 LPLEVF-----DEFRAALAANRAQFYIDVPS-GPF---YGFNREGATVSQGLIDHWWLQGMMGAAN----------AHYE  197 (275)
T ss_dssp             BCHHHH-----HHHHHHHHHCHHHHHHHHHH-TTT---TTTTSTTCCCCHHHHHHHHHHHHHSCHH----------HHHH
T ss_pred             hhhhhh-----hhhhhhhhhhhHHHHHhhhh-hhh---hhcccchhhHHHHHHHHHHHhhcccchH----------HHHH
Confidence            000000     00000000000000000000 000   000 000000000 00000000000000          0000


Q ss_pred             cchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463          707 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL  785 (790)
Q Consensus       707 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl  785 (790)
                      ....+........+.++ ++|+|+++|++|..+|.....+....+.   ..+++++++++||.++. +++++.+.|.+||
T Consensus       198 ~~~~~~~~~~~~~l~~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl  273 (275)
T d1a88a_         198 CIAAFSETDFTDDLKRI-DVPVLVAHGTDDQVVPYADAAPKSAELL---ANATLKSYEGLPHGMLSTHPEVLNPDLLAFV  273 (275)
T ss_dssp             HHHHHHHCCCHHHHHHC-CSCEEEEEETTCSSSCSTTTHHHHHHHS---TTEEEEEETTCCTTHHHHCHHHHHHHHHHHH
T ss_pred             HHHHhhhhhhhHHHHhh-ccccceeecCCCCCcCHHHHHHHHHHhC---CCCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence            00111122233567788 9999999999999999877655443332   23589999999999887 8999999999999


Q ss_pred             HH
Q psy463          786 DS  787 (790)
Q Consensus       786 ~~  787 (790)
                      +.
T Consensus       274 ~s  275 (275)
T d1a88a_         274 KS  275 (275)
T ss_dssp             HC
T ss_pred             cC
Confidence            73

>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.70  E-value=2e-16  Score=161.26  Aligned_cols=275  Identities=11%  Similarity=0.039  Sum_probs=147.1

Q ss_pred             cCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhh
Q psy463          477 IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGY  556 (790)
Q Consensus       477 ~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~  556 (790)
                      ..+|.++++.-..+.       ...|+||++||.+++   ...|.. .. ..++++||.|+++|.||+|.+.....    
T Consensus        30 ~~~g~~~~y~~~G~~-------~~~p~llllHG~~~~---~~~~~~-~~-~~l~~~~~~vi~~Dl~G~G~S~~~~~----   93 (310)
T d1b6ga_          30 GYPGLRAHYLDEGNS-------DAEDVFLCLHGEPTW---SYLYRK-MI-PVFAESGARVIAPDFFGFGKSDKPVD----   93 (310)
T ss_dssp             TCTTCEEEEEEEECT-------TCSCEEEECCCTTCC---GGGGTT-TH-HHHHHTTCEEEEECCTTSTTSCEESC----
T ss_pred             CCCCEEEEEEEecCC-------CCCCEEEEECCCCCc---hHHHHH-HH-HHhhccCceEEEeeecCccccccccc----
Confidence            448899988766543       235899999999876   333432 23 33444899999999999887653211    


Q ss_pred             ccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCC
Q psy463          557 RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGL  636 (790)
Q Consensus       557 ~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~  636 (790)
                        .....+++..+.+..++++   .+.+++.|+||||||.+++.+|.++|+ +++.+|++++..............+...
T Consensus        94 --~~~~~~~~~~~~l~~~l~~---l~~~~~~lvGhS~Gg~ia~~~A~~~P~-~V~~lvl~~~~~~~~~~~~~~~~~~~~~  167 (310)
T d1b6ga_          94 --EEDYTFEFHRNFLLALIER---LDLRNITLVVQDWGGFLGLTLPMADPS-RFKRLIIMNACLMTDPVTQPAFSAFVTQ  167 (310)
T ss_dssp             --GGGCCHHHHHHHHHHHHHH---HTCCSEEEEECTHHHHHHTTSGGGSGG-GEEEEEEESCCCCCCTTTCTHHHHTTTS
T ss_pred             --cccccccccccchhhhhhh---ccccccccccceecccccccchhhhcc-ccceEEEEcCccCCCcccchhHHHHhhc
Confidence              1113466777777776663   335789999999999999999999986 8998888876532211110000011111


Q ss_pred             CCccCchhhhhhcccc---chhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCC-CcCCcchhhh
Q psy463          637 PTFEDNLEGYKIAALN---NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLP-TFEDNLEGYK  712 (790)
Q Consensus       637 ~~~~~~~~~~~~~~~~---~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~  712 (790)
                      +  .............   .....+..        .................+......-....+.... ..........
T Consensus       168 ~--~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (310)
T d1b6ga_         168 P--ADGFTAWKYDLVTPSDLRLDQFMK--------RWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDIS  237 (310)
T ss_dssp             S--TTTHHHHHHHHHSCSSCCHHHHHH--------HHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHH
T ss_pred             c--hhhhhhhhhhhccchhhhhhhhhh--------ccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhh
Confidence            0  0000000000000   00000000        0000000000000000000000000000000000 0000000001


Q ss_pred             hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          713 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       713 ~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ..........+ ++|+|+++|++|..+++..+..+.+.+...   .++++++++||+++. .++.+.+.|.+||++
T Consensus       238 ~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~---~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~  309 (310)
T d1b6ga_         238 TEAISFWQNDW-NGQTFMAIGMKDKLLGPDVMYPMKALINGC---PEPLEIADAGHFVQEFGEQVAREALKHFAET  309 (310)
T ss_dssp             HHHHHHHHHTC-CSEEEEEEETTCSSSSHHHHHHHHHHSTTC---CCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred             hhhhHHhhccc-CCCeEEEEeCCCCCCCHHHHHHHHHhcCCC---ccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence            11112234567 899999999999999999888887766543   366789999998876 677888899999875

>d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: YdeN-like
domain: Hypothetical protein YdeN
species: Bacillus subtilis [TaxId: 1423]

Probab=99.70  E-value=2.5e-16  Score=147.00  Aligned_cols=179  Identities=16%  Similarity=0.069  Sum_probs=116.7

Q ss_pred             EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC
Q psy463          503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID  582 (790)
Q Consensus       503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d  582 (790)
                      .||++||..++.  .+.|. .+....++++||.|+++|++|++..               ..++..+.++.+..    ..
T Consensus         3 ~V~~vHG~~~~~--~~~~~-~~l~~~L~~~G~~v~~~d~p~~~~~---------------~~~~~~~~l~~~~~----~~   60 (186)
T d1uxoa_           3 QVYIIHGYRASS--TNHWF-PWLKKRLLADGVQADILNMPNPLQP---------------RLEDWLDTLSLYQH----TL   60 (186)
T ss_dssp             EEEEECCTTCCT--TSTTH-HHHHHHHHHTTCEEEEECCSCTTSC---------------CHHHHHHHHHTTGG----GC
T ss_pred             EEEEECCCCCCc--chhHH-HHHHHHHHhCCCEEEEeccCCCCcc---------------hHHHHHHHHHHHHh----cc
Confidence            588999987752  22332 3344555568999999999986531               23343333333332    44


Q ss_pred             CCceEEEEechHHHHHHHHHhcCCCCc-eEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCC
Q psy463          583 KTRTAIWGWSYGGYATGLALALDPSNV-FKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDK  661 (790)
Q Consensus       583 ~~ri~i~G~S~GG~~a~~~a~~~p~~~-~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  661 (790)
                      ..+++|+||||||.+++.++.+++... ..++++.++........              .....+..             
T Consensus        61 ~~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~-------------  113 (186)
T d1uxoa_          61 HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTL--------------QMLDEFTQ-------------  113 (186)
T ss_dssp             CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTC--------------GGGGGGTC-------------
T ss_pred             CCCcEEEEechhhHHHHHHHHhCCccceeeEEeecccccccchhh--------------hhhhhhhc-------------
Confidence            578999999999999999999888533 34455555443221100              00000000             


Q ss_pred             cEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccch
Q psy463          662 QYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHF  741 (790)
Q Consensus       662 p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~  741 (790)
                                                  ..                       .......++ .+|+|++||++|.+||+
T Consensus       114 ----------------------------~~-----------------------~~~~~~~~~-~~p~lvi~g~~D~~vp~  141 (186)
T d1uxoa_         114 ----------------------------GS-----------------------FDHQKIIES-AKHRAVIASKDDQIVPF  141 (186)
T ss_dssp             ----------------------------SC-----------------------CCHHHHHHH-EEEEEEEEETTCSSSCH
T ss_pred             ----------------------------cc-----------------------ccccccccC-CCCEEEEecCCCCCCCH
Confidence                                        00                       000223345 78999999999999999


Q ss_pred             hhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHHHH
Q psy463          742 QQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFLDS  787 (790)
Q Consensus       742 ~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl~~  787 (790)
                      +.++.+++.+.     ++++++|++||....    ...++.+.+.+||.+
T Consensus       142 ~~~~~l~~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~  186 (186)
T d1uxoa_         142 SFSKDLAQQID-----AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK  186 (186)
T ss_dssp             HHHHHHHHHTT-----CEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcC-----CEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence            99999998772     489999999997654    446888888888863

>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/lipase
domain: Carboxylesterase Est
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.69  E-value=8.7e-17  Score=156.49  Aligned_cols=226  Identities=14%  Similarity=0.072  Sum_probs=127.2

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      +.||++||.+++.   ..|.  .....++++||.|+++|+||+|.+........    ......+....+..+..    .
T Consensus        12 ~~vvliHG~~~~~---~~~~--~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~----~~~~~~~~~~~~~~~~~----~   78 (242)
T d1tqha_          12 RAVLLLHGFTGNS---ADVR--MLGRFLESKGYTCHAPIYKGHGVPPEELVHTG----PDDWWQDVMNGYEFLKN----K   78 (242)
T ss_dssp             CEEEEECCTTCCT---HHHH--HHHHHHHHTTCEEEECCCTTSSSCHHHHTTCC----HHHHHHHHHHHHHHHHH----H
T ss_pred             CeEEEECCCCCCH---HHHH--HHHHHHHHCCCEEEEEeCCCCccccccccccc----hhHHHHHHHHHHhhhhh----c
Confidence            5678899988762   3333  33445556899999999999887654322111    11123344444444443    3


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCC
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDK  661 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  661 (790)
                      +..+++++|||+||.+++.++.++|. .. .++..++.. .......+. ..          ..+...    ......  
T Consensus        79 ~~~~~~l~G~S~Gg~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~-~~----------~~~~~~----~~~~~~--  138 (242)
T d1tqha_          79 GYEKIAVAGLSLGGVFSLKLGYTVPI-EG-IVTMCAPMY-IKSEETMYE-GV----------LEYARE----YKKREG--  138 (242)
T ss_dssp             TCCCEEEEEETHHHHHHHHHHTTSCC-SC-EEEESCCSS-CCCHHHHHH-HH----------HHHHHH----HHHHHT--
T ss_pred             ccCceEEEEcchHHHHhhhhcccCcc-cc-ccccccccc-ccchhHHHH-HH----------HHHHHH----Hhhhcc--
Confidence            45799999999999999999998874 32 222222221 110000000 00          000000    000000  


Q ss_pred             cEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccch
Q psy463          662 QYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHF  741 (790)
Q Consensus       662 p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~  741 (790)
                                  ...................            ...............+..+ ++|+|+++|++|..+|+
T Consensus       139 ------------~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~-~~p~lii~g~~D~~~~~  193 (242)
T d1tqha_         139 ------------KSEEQIEQEMEKFKQTPMK------------TLKALQELIADVRDHLDLI-YAPTFVVQARHDEMINP  193 (242)
T ss_dssp             ------------CCHHHHHHHHHHHTTSCCT------------THHHHHHHHHHHHHTGGGC-CSCEEEEEETTCSSSCT
T ss_pred             ------------chhhhHHHHHhhhhhhccc------------hhhccccccccccccccee-ccccceeecccCCccCH
Confidence                        0000000000000000000            0000000111223556778 99999999999999999


Q ss_pred             hhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHH
Q psy463          742 QQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDS  787 (790)
Q Consensus       742 ~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~  787 (790)
                      +.++.+++.+...  .+++++++++||.++.  .++++.+.|.+||++
T Consensus       194 ~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~  239 (242)
T d1tqha_         194 DSANIIYNEIESP--VKQIKWYEQSGHVITLDQEKDQLHEDIYAFLES  239 (242)
T ss_dssp             THHHHHHHHCCCS--SEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCC--CcEEEEECCCCCcCccccCHHHHHHHHHHHHHh
Confidence            9999999887533  4689999999998875  578899999999986

>d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Feruloyl esterase domain of the cellulosomal xylanase z
species: Clostridium thermocellum [TaxId: 1515]

Probab=99.69  E-value=2.2e-15  Score=148.41  Aligned_cols=218  Identities=17%  Similarity=0.068  Sum_probs=136.7

Q ss_pred             CCceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc---hHHHHHhc---CCeEEEEE
Q psy463          467 LPSVEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD---WNLYLADN---KDIVVAYI  539 (790)
Q Consensus       467 ~~~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~---~~~~~~~~---~G~~v~~~  539 (790)
                      ..+++.+++.+. +|.++.+.+++|.+++  +.+++|+|+++||+++...........   ........   ..+.+...
T Consensus        19 ~g~~~~~~~~S~~~g~~~~~~v~lP~~y~--~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (255)
T d1jjfa_          19 RGQVVNISYFSTATNSTRPARVYLPPGYS--KDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTP   96 (255)
T ss_dssp             CCEEEEEEEEETTTTEEEEEEEEECTTCC--TTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             ceEEEEEEEEecCCCCEEEEEEEeCCCCC--CCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeec
Confidence            345677777754 6899999999999988  888999999999987653211111110   11112221   22344444


Q ss_pred             cCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC-CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC
Q psy463          540 DGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL-PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP  618 (790)
Q Consensus       540 d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~  618 (790)
                      +............    ..   .....+.+.+.++.++. ..+|.++++++|+|+||++++.++.++|+ +|+++++.+|
T Consensus        97 ~~~~~~~~~~~~~----~~---~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd-~F~~v~~~sg  168 (255)
T d1jjfa_          97 NTNAAGPGIADGY----EN---FTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLD-KFAYIGPISA  168 (255)
T ss_dssp             CCCCCCTTCSCHH----HH---HHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTT-TCSEEEEESC
T ss_pred             ccccccccccccc----cc---hHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCC-cccEEEEEcc
Confidence            4333211111100    00   11122223344444433 33678899999999999999999999985 9999999988


Q ss_pred             CCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccc
Q psy463          619 VTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRY  698 (790)
Q Consensus       619 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~  698 (790)
                      ..+....                 ...+.                                          ...      
T Consensus       169 ~~~~~~~-----------------~~~~~------------------------------------------~~~------  183 (255)
T d1jjfa_         169 APNTYPN-----------------ERLFP------------------------------------------DGG------  183 (255)
T ss_dssp             CTTSCCH-----------------HHHCT------------------------------------------TTT------
T ss_pred             CcCCccc-----------------ccccc------------------------------------------cHH------
Confidence            6543210                 00000                                          000      


Q ss_pred             cCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHH
Q psy463          699 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFY  778 (790)
Q Consensus       699 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~  778 (790)
                                         ...... ..|+++.||+.|..++  ..++++++|+++|+++++.++|+++|.+.    -+-
T Consensus       184 -------------------~~~~~~-~~~~~i~~G~~D~~~~--~~~~~~~~L~~~g~~~~~~~~~~ggH~~~----~W~  237 (255)
T d1jjfa_         184 -------------------KAAREK-LKLLFIACGTNDSLIG--FGQRVHEYCVANNINHVYWLIQGGGHDFN----VWK  237 (255)
T ss_dssp             -------------------HHHHHH-CSEEEEEEETTCTTHH--HHHHHHHHHHHTTCCCEEEEETTCCSSHH----HHH
T ss_pred             -------------------HHhhcc-CCcceEEeCCCCCCch--HHHHHHHHHHHCCCCEEEEEECCCCcCHH----HHH
Confidence                               222333 6899999999999876  46789999999999999999999999654    233


Q ss_pred             HHHHHHH
Q psy463          779 HTLERFL  785 (790)
Q Consensus       779 ~~i~~fl  785 (790)
                      +.+.+||
T Consensus       238 ~~l~~fl  244 (255)
T d1jjfa_         238 PGLWNFL  244 (255)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4444555

>d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: Alpha-amino acid ester hydrolase
species: Acetobacter pasteurianus [TaxId: 438]

Probab=99.69  E-value=3.9e-16  Score=163.30  Aligned_cols=148  Identities=16%  Similarity=0.129  Sum_probs=110.1

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCc----c---ccccccccchHHHHHhcCCeEEEEEcCC
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSS----F---QVTERFSVDWNLYLADNKDIVVAYIDGR  542 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~----~---~~~~~~~~~~~~~~~~~~G~~v~~~d~r  542 (790)
                      .+.+.++.+||++|.+.+|+|.+     .+++|+||+.|+....    .   ..............++++||+|+.+|.|
T Consensus        28 ~~~v~ipmrDG~~L~~~v~~P~~-----~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~R  102 (385)
T d2b9va2          28 KREVMVPMRDGVKLYTVIVIPKN-----ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIR  102 (385)
T ss_dssp             EEEEEEECTTSCEEEEEEEEETT-----CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECT
T ss_pred             EeEEEEECCCCCEEEEEEEEcCC-----CCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCC
Confidence            34678999999999999999974     5689999988753211    0   0000001112234455699999999999


Q ss_pred             CCCCChhhhHhh-----hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeC
Q psy463          543 NSALKGNTLKYA-----GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVA  617 (790)
Q Consensus       543 G~~~~g~~~~~~-----~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~  617 (790)
                      |.++++..+...     ....++..+..|..++++|+.+ .+..+..||+++|+|+||++++.+|...|+ .+++++..+
T Consensus       103 G~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~-q~~~~~g~vg~~G~SygG~~~~~~a~~~~~-~l~a~~~~~  180 (385)
T d2b9va2         103 GKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVH-NVPESNGRVGMTGSSYEGFTVVMALLDPHP-ALKVAAPES  180 (385)
T ss_dssp             TSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHH-SCTTEEEEEEEEEEEHHHHHHHHHHTSCCT-TEEEEEEEE
T ss_pred             cccCCCCceeeccccccccccchhhHHHHHHHHHHHHHh-ccCccccceeeccccHHHHHHHHHHhccCC-cceEEEEec
Confidence            998887665432     2334556678999999999988 555677899999999999999999987765 899999999


Q ss_pred             CCCCccc
Q psy463          618 PVTDWIY  624 (790)
Q Consensus       618 ~~~~~~~  624 (790)
                      ++.++..
T Consensus       181 ~~~d~~~  187 (385)
T d2b9va2         181 PMVDGWM  187 (385)
T ss_dssp             ECCCTTT
T ss_pred             ccccccc
Confidence            8877653

>d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD)
species: Burkholderia xenovorans [TaxId: 36873]

Probab=99.69  E-value=6e-17  Score=162.70  Aligned_cols=242  Identities=12%  Similarity=0.027  Sum_probs=132.7

Q ss_pred             cEEEEEcCCCCcccccccccc--chHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          502 PLLIHVYGGPSSFQVTERFSV--DWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~--~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      |+||++||.+.+.   ..|..  .....++. .||.|+++|+||+|.+.....       ......+..+.+..++++  
T Consensus        31 ~~ivllHG~~~~~---~~~~~~~~~l~~~~~-~g~~v~~~D~~G~G~S~~~~~-------~~~~~~~~~~~i~~li~~--   97 (283)
T d2rhwa1          31 ETVIMLHGGGPGA---GGWSNYYRNVGPFVD-AGYRVILKDSPGFNKSDAVVM-------DEQRGLVNARAVKGLMDA--   97 (283)
T ss_dssp             SEEEEECCCSTTC---CHHHHHTTTHHHHHH-TTCEEEEECCTTSTTSCCCCC-------SSCHHHHHHHHHHHHHHH--
T ss_pred             CeEEEECCCCCCh---hHHHHHHHHHHHHHH-CCCEEEEEeCCCCcccccccc-------cccccchhhhhccccccc--
Confidence            6788999987763   23321  12233444 799999999999876533211       111222333344444442  


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc-h---h---hhcCCCCccCchhhhhhcccc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY-S---E---RYMGLPTFEDNLEGYKIAALN  652 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~-~---~---~~~g~~~~~~~~~~~~~~~~~  652 (790)
                       ++.+++.++||||||.+++.++.++|. .++.+++.+|..-........ .   .   ......    .......    
T Consensus        98 -l~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----  167 (283)
T d2rhwa1          98 -LDIDRAHLVGNAMGGATALNFALEYPD-RIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEP----SYETLKQ----  167 (283)
T ss_dssp             -HTCCCEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSC----CHHHHHH----
T ss_pred             -ccccccccccccchHHHHHHHHHHhhh-hcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhh----hhhhHHH----
Confidence             334789999999999999999999985 888888887643211100000 0   0   000000    0000000    


Q ss_pred             chhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEe
Q psy463          653 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH  732 (790)
Q Consensus       653 ~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~  732 (790)
                       ......         .................+.............      ..............+.++ ++|+|+++
T Consensus       168 -~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~i-~~P~lii~  230 (283)
T d2rhwa1         168 -MLQVFL---------YDQSLITEELLQGRWEAIQRQPEHLKNFLIS------AQKAPLSTWDVTARLGEI-KAKTFITW  230 (283)
T ss_dssp             -HHHHHC---------SCGGGCCHHHHHHHHHHHHHCHHHHHHHHHH------HHHSCGGGGCCGGGGGGC-CSCEEEEE
T ss_pred             -HHHHhh---------cccccCcHHHHHHHHHHhhhhhhhhhhhhhh------hhhhhccccchHHHHhhC-CCCEEEEE
Confidence             000000         0000000000111111111100000000000      000000111223557788 99999999


Q ss_pred             cCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          733 GTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       733 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      |++|..+|++.+..+.+.++.    ++++++|++||.++. +++++.+.|.+||+.
T Consensus       231 G~~D~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~  282 (283)
T d2rhwa1         231 GRDDRFVPLDHGLKLLWNIDD----ARLHVFSKCGHWAQWEHADEFNRLVIDFLRH  282 (283)
T ss_dssp             ETTCSSSCTHHHHHHHHHSSS----EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred             eCCCCCcCHHHHHHHHHhCCC----CEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence            999999999999988887753    589999999998877 889999999999985

>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Proline iminopeptidase
species: Xanthomonas campestris, pv. citri [TaxId: 339]

Probab=99.68  E-value=3e-16  Score=160.14  Aligned_cols=127  Identities=13%  Similarity=0.068  Sum_probs=90.3

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +.-.++..||.++++..+..+        ..|.||++||++++.   ..|.  ....++ ..+|.|+++|.||.|.+...
T Consensus        12 ~~~~i~~~dg~~i~y~~~G~~--------~g~pvvllHG~~g~~---~~~~--~~~~~l-~~~~~Vi~~D~rG~G~S~~~   77 (313)
T d1azwa_          12 QQGSLKVDDRHTLYFEQCGNP--------HGKPVVMLHGGPGGG---CNDK--MRRFHD-PAKYRIVLFDQRGSGRSTPH   77 (313)
T ss_dssp             EEEEEECSSSCEEEEEEEECT--------TSEEEEEECSTTTTC---CCGG--GGGGSC-TTTEEEEEECCTTSTTSBST
T ss_pred             CCCEEEeCCCcEEEEEEecCC--------CCCEEEEECCCCCCc---cchH--HHhHHh-hcCCEEEEEeccccCCCCcc
Confidence            556778889999998887432        225578899998762   2222  222223 47999999999998765432


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      .      ......+.++.+.+..++++++   .+++.|+||||||.+++.++.++|+ +++.++..++...
T Consensus        78 ~------~~~~~~~~~~~~dl~~~~~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lv~~~~~~~  138 (313)
T d1azwa_          78 A------DLVDNTTWDLVADIERLRTHLG---VDRWQVFGGSWGSTLALAYAQTHPQ-QVTELVLRGIFLL  138 (313)
T ss_dssp             T------CCTTCCHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCCC
T ss_pred             c------cccchhHHHHHHHHHHHHHhhc---cccceeEEecCCcHHHHHHHHHhhh-ceeeeeEeccccc
Confidence            1      1122346677777777777544   5789999999999999999999985 8888888877544

>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hydroxynitrile lyase-like
domain: Salicylic acid-binding protein 2 (SABP2)
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.68  E-value=3.6e-16  Score=153.67  Aligned_cols=248  Identities=13%  Similarity=0.030  Sum_probs=134.8

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |.||++||.+++   ...|.  .....++++||.|+++|+||+|.+......       .....+....+..+....  .
T Consensus         3 ~~vvllHG~~~~---~~~w~--~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~-------~~~~~~~~~~~~~~~~~~--~   68 (258)
T d1xkla_           3 KHFVLVHGACHG---GWSWY--KLKPLLEAAGHKVTALDLAASGTDLRKIEE-------LRTLYDYTLPLMELMESL--S   68 (258)
T ss_dssp             CEEEEECCTTCC---GGGGT--THHHHHHHTTCEEEECCCTTSTTCCCCGGG-------CCSHHHHHHHHHHHHHTS--C
T ss_pred             CcEEEECCCCCC---HHHHH--HHHHHHHhCCCEEEEecCCCCCCCCCCCCC-------CcchHHHHHHHhhhhhcc--c
Confidence            468889998776   23343  233455558999999999998876432111       123444444444444412  2


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc-hhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY-SERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                      ...++.++||||||.+++.++.++|. +++.++..++........... ........  ..................   
T Consensus        69 ~~~~~~lvghS~Gg~va~~~a~~~p~-~~~~lil~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---  142 (258)
T d1xkla_          69 ADEKVILVGHSLGGMNLGLAMEKYPQ-KIYAAVFLAAFMPDSVHNSSFVLEQYNERT--PAENWLDTQFLPYGSPEE---  142 (258)
T ss_dssp             SSSCEEEEEETTHHHHHHHHHHHCGG-GEEEEEEESCCCCCSSSCTTHHHHHHHHTS--CTTTTTTCEEEECSCTTS---
T ss_pred             ccccccccccchhHHHHHHHhhhhcc-ccceEEEecccCCCcccchHHHHHHHhhhh--hhhhhhhhhhhhhhhhhh---
Confidence            23689999999999999999999986 888888777653322111000 00000000  000000000000000000   


Q ss_pred             CcEEEEeec-----CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCC
Q psy463          661 KQYLLVHGT-----MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTM  735 (790)
Q Consensus       661 ~p~l~~~g~-----~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~  735 (790)
                      .........     ...................              ....................+ ++|+|+++|++
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~  207 (258)
T d1xkla_         143 PLTSMFFGPKFLAHKLYQLCSPEDLALASSLVR--------------PSSLFMEDLSKAKYFTDERFG-SVKRVYIVCTE  207 (258)
T ss_dssp             CCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCC--------------CBCCCHHHHHHCCCCCTTTGG-GSCEEEEEETT
T ss_pred             hcccccccHHHHHHHhhhcccHHHHHHhhhhhh--------------hhhhhhhhhhhhhhccccccc-ccceeEeeecC
Confidence            000000000     0000000000000000000              000001111111222345566 89999999999


Q ss_pred             CcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          736 DDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       736 D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      |..+|++.++.+.+.++.    +++++++++||..+. .++++.+.|.+|+++|
T Consensus       208 D~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~P~~~~~~l~e~~~k~  257 (258)
T d1xkla_         208 DKGIPEEFQRWQIDNIGV----TEAIEIKGADHMAMLCEPQKLCASLLEIAHKY  257 (258)
T ss_dssp             CTTTTHHHHHHHHHHHCC----SEEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHCCC----CEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence            999999999998888754    488999999999877 8999999999999886

>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Rhodococcus sp. [TaxId: 1831]

Probab=99.67  E-value=7.2e-17  Score=162.67  Aligned_cols=264  Identities=11%  Similarity=-0.053  Sum_probs=146.1

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++..+.++        ..|+||++||++++.   ..|.. .. ..++ .||.|+++|+||+|.+...        
T Consensus        15 ~g~~i~y~~~G~~--------~~p~lvllHG~~~~~---~~~~~-~~-~~L~-~~~~vi~~d~~G~G~S~~~--------   72 (291)
T d1bn7a_          15 LGERMHYVDVGPR--------DGTPVLFLHGNPTSS---YLWRN-II-PHVA-PSHRCIAPDLIGMGKSDKP--------   72 (291)
T ss_dssp             TTEEEEEEEESCS--------SSSCEEEECCTTCCG---GGGTT-TH-HHHT-TTSCEEEECCTTSTTSCCC--------
T ss_pred             CCEEEEEEEeCCC--------CCCeEEEECCCCCCH---HHHHH-HH-HHHh-cCCEEEEEeCCCCcccccc--------
Confidence            8899998877543        236788999988763   33432 22 3444 5999999999998765432        


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc--ch---hhh
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI--YS---ERY  633 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~--~~---~~~  633 (790)
                      ......++..+.+..+++++   +..++.++||||||.+++.++.++|+ .++++++.++..........  ..   ...
T Consensus        73 ~~~~~~~~~~~~l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~-~~~~li~~~~~~~~~~~~~~~~~~~~~~~~  148 (291)
T d1bn7a_          73 DLDYFFDDHVRYLDAFIEAL---GLEEVVLVIHDWGSALGFHWAKRNPE-RVKGIACMEFIRPIPTWDEWPEFARETFQA  148 (291)
T ss_dssp             SCCCCHHHHHHHHHHHHHHT---TCCSEEEEEEHHHHHHHHHHHHHCGG-GEEEEEEEEECCCBCSGGGSCHHHHHHHHH
T ss_pred             ccccchhHHHHHHhhhhhhh---ccccccccccccccchhHHHHHhCCc-ceeeeeeeccccCCccchhhhhhhhhHHHH
Confidence            11234667777777777644   45789999999999999999999986 78887776654332211100  00   000


Q ss_pred             cCCCCccCchhhhhhccc--cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchh-cccccCCCCcCCcc-h
Q psy463          634 MGLPTFEDNLEGYKIAAL--NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQ-SQRYMGLPTFEDNL-E  709 (790)
Q Consensus       634 ~g~~~~~~~~~~~~~~~~--~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~-~  709 (790)
                      +...  ............  ........            ....................... ...+.......... .
T Consensus       149 ~~~~--~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (291)
T d1bn7a_         149 FRTA--DVGRELIIDQNAFIEGVLPKCV------------VRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPAN  214 (291)
T ss_dssp             HTST--THHHHHHTTSCHHHHTHHHHTC------------SSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHH
T ss_pred             Hhhh--hhHHHhhhhhhhhHHhhhhhhc------------cccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhch
Confidence            0000  000000000000  00000000            00000000000000000000000 00000000000000 0


Q ss_pred             hh-hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          710 GY-KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       710 ~~-~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .. ........+.++ ++|+|+++|++|..+|+..+..+.+.++.    +++++++++||.++. .++++.+.|.+||+.
T Consensus       215 ~~~~~~~~~~~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~  289 (291)
T d1bn7a_         215 IVALVEAYMNWLHQS-PVPKLLFWGTPGVLIPPAEAARLAESLPN----CKTVDIGPGLHYLQEDNPDLIGSEIARWLPG  289 (291)
T ss_dssp             HHHHHHHHHHHHHHC-CSCEEEEEEEECSSSCHHHHHHHHHHSTT----EEEEEEEEESSCGGGTCHHHHHHHHHHHSGG
T ss_pred             hhhhhhhhhhhhhcC-CCCEEEEEeCCCCCcCHHHHHHHHHHCCC----CEEEEECCCCCchHHhCHHHHHHHHHHHHHh
Confidence            00 011122445778 99999999999999999999988887764    488999999998887 788999999999874

>d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hydroxynitrile lyase-like
domain: Hydroxynitrile lyase
species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]

Probab=99.66  E-value=4.5e-16  Score=153.07  Aligned_cols=240  Identities=11%  Similarity=-0.030  Sum_probs=132.4

Q ss_pred             EEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCC
Q psy463          504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDK  583 (790)
Q Consensus       504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~  583 (790)
                      +|++||.+++.   ..|.  .....++++||.|+++|+||+|.+.....       ....+++..+.+..+.....  ..
T Consensus         5 ~vliHG~~~~~---~~w~--~~~~~L~~~g~~Via~Dl~G~G~S~~~~~-------~~~~~~~~~~~l~~~~~~~~--~~   70 (256)
T d3c70a1           5 FVLIHTICHGA---WIWH--KLKPLLEALGHKVTALDLAASGVDPRQIE-------EIGSFDEYSEPLLTFLEALP--PG   70 (256)
T ss_dssp             EEEECCTTCCG---GGGT--THHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHTHHHHHHHHHSC--TT
T ss_pred             EEEeCCCCCCH---HHHH--HHHHHHHhCCCEEEEEcCCCCCCCCCCCC-------CCCCHHHHHHHhhhhhhhhc--cc
Confidence            47899988763   3343  23445555899999999999887653311       11334555555554443232  35


Q ss_pred             CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc--hhhhcCCCCccCchhhhhhccccchhhhccCC
Q psy463          584 TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY--SERYMGLPTFEDNLEGYKIAALNNKVDRIRDK  661 (790)
Q Consensus       584 ~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  661 (790)
                      +++.++||||||.+++.++.++|+ +++.++..++...........  ........  .......  .   ....    .
T Consensus        71 ~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~---~~~~----~  138 (256)
T d3c70a1          71 EKVILVGESCGGLNIAIAADKYCE-KIAAAVFHNSVLPDTEHCPSYVVDKLMEVFP--DWKDTTY--F---TYTK----D  138 (256)
T ss_dssp             CCEEEEEETTHHHHHHHHHHHHGG-GEEEEEEESCCCCCSSSCTTHHHHHHHHHSC--CCTTCEE--E---EEEE----T
T ss_pred             cceeecccchHHHHHHHHhhcCch-hhhhhheeccccCCcccchhhHhhhhhhhhh--hhhhhHH--H---hhhc----c
Confidence            789999999999999999999886 888888777653322111000  00000000  0000000  0   0000    0


Q ss_pred             cEEEEeecCCC--------ccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEec
Q psy463          662 QYLLVHGTMDD--------NVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHG  733 (790)
Q Consensus       662 p~l~~~g~~d~--------~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G  733 (790)
                      .........+.        ................ ..             ..................+ ++|+|+++|
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~-~~P~l~i~G  203 (256)
T d3c70a1         139 GKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTR-KG-------------SLFQNILAKRPFFTKEGYG-SIKKIYVWT  203 (256)
T ss_dssp             TEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCC-CB-------------CCCHHHHTTSCCCCTTTGG-GSCEEEEEC
T ss_pred             ccccchhhhhhhhhhhhhhhhcchhhHHHhhhhhh-hh-------------hHHHhhhhhcchhhhhhcc-ccceeEEee
Confidence            00000000000        0000000000000000 00             0000111111112334455 799999999


Q ss_pred             CCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463          734 TMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC  788 (790)
Q Consensus       734 ~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~  788 (790)
                      ++|..+|++..+.+.+.+..    .++++++++||.++. +++++.+.+.+|++++
T Consensus       204 ~~D~~~~~~~~~~~~~~~p~----~~~~~i~~agH~~~~e~P~~~~~~l~~~~~~~  255 (256)
T d3c70a1         204 DQDEIFLPEFQLWQIENYKP----DKVYKVEGGDHKLQLTKTKEIAEILQEVADTY  255 (256)
T ss_dssp             TTCSSSCHHHHHHHHHHSCC----SEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred             cCCCCCCHHHHHHHHHHCCC----CEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence            99999999888888776643    489999999999887 8999999999999875

>d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: IroE-like
domain: Enterobactin and salmochelin hydrolase IroE
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=8.3e-16  Score=152.51  Aligned_cols=212  Identities=14%  Similarity=0.129  Sum_probs=139.7

Q ss_pred             CCCceEEEEEEcCCC-cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCC
Q psy463          466 TLPSVEYMSVPIQPN-MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS  544 (790)
Q Consensus       466 ~~~~~~~~~~~~~dg-~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~  544 (790)
                      .+.+.+.+++.+.|| .++.+++++|.+++  +.+++|+|+++||++.....    ...+..++.+.+++.|+++++++.
T Consensus         9 ~~~~~~~~~~~s~dg~~~~~~~v~~P~~~~--~~~~yPvi~~lhG~~~~~~~----~~~~~~~~~~~~~~~vV~v~~~~~   82 (265)
T d2gzsa1           9 VFYHFSATSFDSVDGTRHYRVWTAVPNTTA--PASGYPILYMLDGNAVMDRL----DDELLKQLSEKTPPVIVAVGYQTN   82 (265)
T ss_dssp             SSEEEEEEEEECTTSSCEEEEEEEEESSCC--CTTCEEEEEESSHHHHHHHC----CHHHHHHHTTSCCCEEEEEEESSS
T ss_pred             CcceeEEEEEEcCCCCEEEEEEEEcCCCCC--CCCCceEEEEecCcchhhhH----HHHHHHHHHhcCCCeEEEecCCCC
Confidence            445677889999887 58999999999988  88999999999997644221    122445666778999999999987


Q ss_pred             CCChhhhHhhhhccCCc------------------cchhH-H-HHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc
Q psy463          545 ALKGNTLKYAGYRRLGT------------------VEIYD-Q-INVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL  604 (790)
Q Consensus       545 ~~~g~~~~~~~~~~~~~------------------~~~~D-~-~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~  604 (790)
                      ...+...+...+..+..                  ..+.+ + .+.+.++.+ ...+|+.+++|+|+||||++++.++.+
T Consensus        83 ~~~~~~~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~-~~~~d~~~~~i~G~S~GG~~a~~~~~~  161 (265)
T d2gzsa1          83 LPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQ-GLNIDRQRRGLWGHSYGGLFVLDSWLS  161 (265)
T ss_dssp             SSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTT-TSCEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred             CcCcccccccccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHH-hcCCCcCceEEEeccHHHHHHHHHHHc
Confidence            76554433222111100                  00111 1 123344444 344788999999999999999998875


Q ss_pred             CCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHH
Q psy463          605 DPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAK  684 (790)
Q Consensus       605 ~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~  684 (790)
                      . + .|.++++.+|...+..                  ...+......                                
T Consensus       162 ~-~-~f~~~~a~s~~~~~~~------------------~~~~~~~~~~--------------------------------  189 (265)
T d2gzsa1         162 S-S-YFRSYYSASPSLGRGY------------------DALLSRVTAV--------------------------------  189 (265)
T ss_dssp             C-S-SCSEEEEESGGGSTTH------------------HHHHHHHHTS--------------------------------
T ss_pred             C-c-ccCEEEEECCcccccc------------------hhhhhccccc--------------------------------
Confidence            4 3 6777888888654321                  1111111000                                


Q ss_pred             HHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCC--------CcccchhhhHHHHHHHHhcCC
Q psy463          685 SLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTM--------DDNVHFQQSMMLAKSLQHADI  756 (790)
Q Consensus       685 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~--------D~~v~~~~~~~l~~~l~~~g~  756 (790)
                                                       ...... ..|+++.+|+.        |..+++.++++++++|+++|+
T Consensus       190 ---------------------------------~~~~~~-~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~  235 (265)
T d2gzsa1         190 ---------------------------------EPLQFC-TKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGV  235 (265)
T ss_dssp             ---------------------------------CTTTTT-TCEEEEEECCC-----------CHHHHHHHHHHHHHHTTC
T ss_pred             ---------------------------------cccccC-CCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCC
Confidence                                             111122 45555555544        778899999999999999999


Q ss_pred             ceEEEEcCCCCCcC
Q psy463          757 MFQSQTYPDEEHGL  770 (790)
Q Consensus       757 ~~~~~~~p~~~H~~  770 (790)
                      ++++.+|||++|+.
T Consensus       236 ~~~~~~~pG~~Hg~  249 (265)
T d2gzsa1         236 NAVFWDFPNLGHGP  249 (265)
T ss_dssp             CEEEEECTTCCHHH
T ss_pred             CEEEEEcCCCCcch
Confidence            99999999999964

>d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Biotin biosynthesis protein BioH
domain: Biotin biosynthesis protein BioH
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=6.1e-16  Score=152.65  Aligned_cols=241  Identities=16%  Similarity=0.164  Sum_probs=129.7

Q ss_pred             CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      +.|.||++||.+.+   ...|..  ....++ .+|.|+++|+||+|.+...         ....+.|   .++.+.. . 
T Consensus        10 g~~~lvllHG~~~~---~~~~~~--~~~~L~-~~~~vi~~D~~G~G~S~~~---------~~~~~~d---~~~~~~~-~-   69 (256)
T d1m33a_          10 GNVHLVLLHGWGLN---AEVWRC--IDEELS-SHFTLHLVDLPGFGRSRGF---------GALSLAD---MAEAVLQ-Q-   69 (256)
T ss_dssp             CSSEEEEECCTTCC---GGGGGG--THHHHH-TTSEEEEECCTTSTTCCSC---------CCCCHHH---HHHHHHT-T-
T ss_pred             CCCeEEEECCCCCC---HHHHHH--HHHHHh-CCCEEEEEeCCCCCCcccc---------ccccccc---ccccccc-c-
Confidence            34677889998876   233432  233445 5899999999998764321         1223334   3444443 2 


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc--cchhhhcCCCCccCchhhhhhccccchhhh
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT--IYSERYMGLPTFEDNLEGYKIAALNNKVDR  657 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  657 (790)
                        ...++.++||||||.+++.++.++|. .++.++++.+.........  ......+.     ......... .......
T Consensus        70 --~~~~~~l~GhS~Gg~ia~~~a~~~p~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~  140 (256)
T d1m33a_          70 --APDKAIWLGWSLGGLVASQIALTHPE-RVRALVTVASSPCFSARDEWPGIKPDVLA-----GFQQQLSDD-QQRTVER  140 (256)
T ss_dssp             --SCSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCSCCBCBTTBCSBCHHHHH-----HHHHHHHHH-HHHHHHH
T ss_pred             --cccceeeeecccchHHHHHHHHhCCc-ccceeeeeecccccccchhhhhhHHHHHH-----HHHhhhhhh-hHHHHHH
Confidence              24789999999999999999999985 7887777765432211100  00000000     000000000 0000000


Q ss_pred             ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCc
Q psy463          658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDD  737 (790)
Q Consensus       658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~  737 (790)
                      ....      ..............+...+...... ...      .+..........+....++++ ++|+|+++|++|.
T Consensus       141 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~  206 (256)
T d1m33a_         141 FLAL------QTMGTETARQDARALKKTVLALPMP-EVD------VLNGGLEILKTVDLRQPLQNV-SMPFLRLYGYLDG  206 (256)
T ss_dssp             HHHT------TSTTSTTHHHHHHHHHHHHHTSCCC-CHH------HHHHHHHHHHHCCCTTGGGGC-CSCEEEEEETTCS
T ss_pred             Hhhh------hhccccchhhHHHHHHHhhhhcchh-hHH------HHHhhhhhhcccchHHHHHhc-cCCccccccccCC
Confidence            0000      0000000001111111111111000 000      000001111122233567788 9999999999999


Q ss_pred             ccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          738 NVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       738 ~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      .+|++.+..+.+.+++    .++.+++++||.+.. +++++.+.|.+||++
T Consensus       207 ~~p~~~~~~l~~~~~~----~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~  253 (256)
T d1m33a_         207 LVPRKVVPMLDKLWPH----SESYIFAKAAHAPFISHPAEFCHLLVALKQR  253 (256)
T ss_dssp             SSCGGGCC-CTTTCTT----CEEEEETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHCCC----CEEEEECCCCCchHHHCHHHHHHHHHHHHHH
Confidence            9999998888766554    489999999998776 899999999999975

>d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/thioesterase 1
domain: Acyl protein thioesterase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=8.8e-16  Score=148.03  Aligned_cols=118  Identities=15%  Similarity=0.103  Sum_probs=91.9

Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR  659 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  659 (790)
                      .+|.+||+|+|+|+||.+|+.++.++|. .++++++.++......                    .+..           
T Consensus       107 ~i~~~ri~l~GfS~Gg~~a~~~~~~~~~-~~~gvi~~sg~lp~~~--------------------~~~~-----------  154 (229)
T d1fj2a_         107 GIPSNRIILGGFSQGGALSLYTALTTQQ-KLAGVTALSCWLPLRA--------------------SFPQ-----------  154 (229)
T ss_dssp             TCCGGGEEEEEETHHHHHHHHHHTTCSS-CCSEEEEESCCCTTGG--------------------GSCS-----------
T ss_pred             CCCccceeeeecccchHHHHHHHHhhcc-ccCccccccccccccc--------------------cccc-----------
Confidence            3888999999999999999999998885 8999998887421100                    0000           


Q ss_pred             CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCccc
Q psy463          660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV  739 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v  739 (790)
                                                    ..                          ....+. ++|+|++||++|.+|
T Consensus       155 ------------------------------~~--------------------------~~~~~~-~~Pvli~hG~~D~~v  177 (229)
T d1fj2a_         155 ------------------------------GP--------------------------IGGANR-DISILQCHGDCDPLV  177 (229)
T ss_dssp             ------------------------------SC--------------------------CCSTTT-TCCEEEEEETTCSSS
T ss_pred             ------------------------------cc--------------------------cccccc-cCceeEEEcCCCCee
Confidence                                          00                          001122 689999999999999


Q ss_pred             chhhhHHHHHHHHhc--CCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463          740 HFQQSMMLAKSLQHA--DIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       740 ~~~~~~~l~~~l~~~--g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      |.+.+++.++.|++.  +.++++.+|++.+|.+.   .+.++.+.+||+++|
T Consensus       178 p~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~---~~~~~~~~~wL~~~L  226 (229)
T d1fj2a_         178 PLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC---QQEMMDVKQFIDKLL  226 (229)
T ss_dssp             CHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC---HHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccC---HHHHHHHHHHHHhHC
Confidence            999999999999884  56889999999999874   355688999999987

>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Bromoperoxidase A2
species: Streptomyces aureofaciens [TaxId: 1894]

Probab=99.65  E-value=9.4e-16  Score=153.01  Aligned_cols=244  Identities=14%  Similarity=0.123  Sum_probs=127.3

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |.||++||.+++.   ..|.. ....++ ++||.|+++|+||+|.+...        .....+++..+.+..+++++   
T Consensus        24 ~~ivllHG~~~~~---~~~~~-~~~~l~-~~g~~vi~~D~~G~G~S~~~--------~~~~~~~~~~~dl~~~l~~l---   87 (277)
T d1brta_          24 QPVVLIHGFPLSG---HSWER-QSAALL-DAGYRVITYDRRGFGQSSQP--------TTGYDYDTFAADLNTVLETL---   87 (277)
T ss_dssp             SEEEEECCTTCCG---GGGHH-HHHHHH-HTTCEEEEECCTTSTTSCCC--------SSCCSHHHHHHHHHHHHHHH---
T ss_pred             CeEEEECCCCCCH---HHHHH-HHHHHH-hCCCEEEEEeCCCCCccccc--------ccccchhhhhhhhhhhhhcc---
Confidence            5688999998763   33331 233344 48999999999998765421        11134556655555555533   


Q ss_pred             CCCceEEEEechHHH-HHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhc---cccc----
Q psy463          582 DKTRTAIWGWSYGGY-ATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIA---ALNN----  653 (790)
Q Consensus       582 d~~ri~i~G~S~GG~-~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~----  653 (790)
                      +.+++.++||||||. ++..++.++|. +++.++..+++..............  .+  ..........   ....    
T Consensus        88 ~~~~~~lvGhS~G~~~~~~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~  162 (277)
T d1brta_          88 DLQDAVLVGFSTGTGEVARYVSSYGTA-RIAKVAFLASLEPFLLKTDDNPDGA--AP--QEFFDGIVAAVKADRYAFYTG  162 (277)
T ss_dssp             TCCSEEEEEEGGGHHHHHHHHHHHCST-TEEEEEEESCCCSCCBCBTTBTTCS--BC--HHHHHHHHHHHHHCHHHHHHH
T ss_pred             CcccccccccccchhhhhHHHHHhhhc-ccceEEEecCCCcccccchhhhhhh--hh--hhHHHHHHHhhhccchhhhhh
Confidence            357899999999975 55556666664 8898888877543321110000000  00  0000000000   0000    


Q ss_pred             hhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEec
Q psy463          654 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHG  733 (790)
Q Consensus       654 ~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G  733 (790)
                      ........     .......................... .  .+.....       + .......+.++ ++|+|+++|
T Consensus       163 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-------~-~~~~~~~l~~i-~~P~lii~g  225 (277)
T d1brta_         163 FFNDFYNL-----DENLGTRISEEAVRNSWNTAASGGFF-A--AAAAPTT-------W-YTDFRADIPRI-DVPALILHG  225 (277)
T ss_dssp             HHHHHTTH-----HHHBTTTBCHHHHHHHHHHHHHSCHH-H--HHHGGGG-------T-TCCCTTTGGGC-CSCEEEEEE
T ss_pred             cccccccc-----chhhhhhhhHHHhhhhhcccchhhhh-h--hhhhhhh-------h-hhhHHHHHHhc-CccceeEee
Confidence            00000000     00000000000011111111110000 0  0000000       0 00112456778 999999999


Q ss_pred             CCCcccchhhhHHHH-HHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          734 TMDDNVHFQQSMMLA-KSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       734 ~~D~~v~~~~~~~l~-~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ++|..++++...++. +.++    .++++++|++||.+.. +++++.+.|.+||++
T Consensus       226 ~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k  277 (277)
T d1brta_         226 TGDRTLPIENTARVFHKALP----SAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK  277 (277)
T ss_dssp             TTCSSSCGGGTHHHHHHHCT----TSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred             cCCCCcCHHHHHHHHHHhCC----CCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence            999999987765443 3333    3589999999998877 889999999999974

>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Gamma-lactamase
species: Aureobacterium sp. [TaxId: 51671]

Probab=99.64  E-value=4.1e-16  Score=155.98  Aligned_cols=249  Identities=12%  Similarity=0.072  Sum_probs=126.7

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      |.||++||.+++.   ..|.. ....++. +||.|+++|+||+|.+....        ....++++.+.+..++++   +
T Consensus        24 ~~illlHG~~~~~---~~~~~-~~~~l~~-~~~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~di~~~i~~---l   87 (279)
T d1hkha_          24 QPVVLIHGYPLDG---HSWER-QTRELLA-QGYRVITYDRRGFGGSSKVN--------TGYDYDTFAADLHTVLET---L   87 (279)
T ss_dssp             EEEEEECCTTCCG---GGGHH-HHHHHHH-TTEEEEEECCTTSTTSCCCS--------SCCSHHHHHHHHHHHHHH---H
T ss_pred             CeEEEECCCCCCH---HHHHH-HHHHHHH-CCCEEEEEechhhCCccccc--------cccchhhhhhhhhhhhhh---c
Confidence            6688999988763   33332 2334444 79999999999987654321        123456666666666653   3


Q ss_pred             CCCceEEEEechHHH-HHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhh---hhccccchhhh
Q psy463          582 DKTRTAIWGWSYGGY-ATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGY---KIAALNNKVDR  657 (790)
Q Consensus       582 d~~ri~i~G~S~GG~-~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~  657 (790)
                      +.+++.++||||||. ++..++.++|+ +++.+++.++...............   .  .......   ...........
T Consensus        88 ~~~~~~lvGhS~Gg~~~a~~~a~~~p~-~v~~lvli~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~  161 (279)
T d1hkha_          88 DLRDVVLVGFSMGTGELARYVARYGHE-RVAKLAFLASLEPFLVQRDDNPEGV---P--QEVFDGIEAAAKGDRFAWFTD  161 (279)
T ss_dssp             TCCSEEEEEETHHHHHHHHHHHHHCST-TEEEEEEESCCCSBCBCBTTBTTSB---C--HHHHHHHHHHHHHCHHHHHHH
T ss_pred             CcCccccccccccccchhhhhcccccc-ccceeEEeeccCCccccchhhhhhh---h--HHHHHHHHHhhhhhhhhhhhh
Confidence            457899999999964 55556666664 7888887776533221110000000   0  0000000   00000000000


Q ss_pred             ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh-hhhhhhhhhccCCccEEEEecCCC
Q psy463          658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK-IAALNNKVDRIRDKQYLLVHGTMD  736 (790)
Q Consensus       658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~P~Lii~G~~D  736 (790)
                      .. .............+..................   ..+.      ....... ....+..+.++ ++|+|+++|++|
T Consensus       162 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~~~~~-~~P~l~i~G~~D  230 (279)
T d1hkha_         162 FY-KNFYNLDENLGSRISEQAVTGSWNVAIGSAPV---AAYA------VVPAWIEDFRSDVEAVRAA-GKPTLILHGTKD  230 (279)
T ss_dssp             HH-HHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTT---HHHH------THHHHTCBCHHHHHHHHHH-CCCEEEEEETTC
T ss_pred             hh-hhhcccchhhhhhhhhhhhhhhhhhhcccchh---hhhh------hhhhhhcccccchhhhccc-CCceEEEEcCCC
Confidence            00 00000000000000000000001100000000   0000      0000000 01123456677 999999999999


Q ss_pred             cccchhhh-HHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463          737 DNVHFQQS-MMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       737 ~~v~~~~~-~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ..++.+.. +.+.+.+++    ++++++|++||.++. .++++.+.|.+||++
T Consensus       231 ~~~~~~~~~~~~~~~~p~----~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k  279 (279)
T d1hkha_         231 NILPIDATARRFHQAVPE----ADYVEVEGAPHGLLWTHADEVNAALKTFLAK  279 (279)
T ss_dssp             SSSCTTTTHHHHHHHCTT----SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred             CccCHHHHHHHHHHhCCC----CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence            99987654 555554443    488999999998877 889999999999975

>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Epoxide hydrolase
domain: Bacterial epoxide hydrolase
species: Agrobacterium radiobacter [TaxId: 358]

Probab=99.64  E-value=1e-15  Score=154.23  Aligned_cols=124  Identities=13%  Similarity=0.067  Sum_probs=84.4

Q ss_pred             EEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhh
Q psy463          472 YMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTL  551 (790)
Q Consensus       472 ~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~  551 (790)
                      ..+++. +|.++++...        +.  .|+||++||.+++.   ..|.  .....++ .+|.|+++|+||+|.+....
T Consensus        10 ~~~~~~-~~~~l~y~~~--------G~--gp~vv~lHG~~~~~---~~~~--~~~~~l~-~~~~vi~~D~~G~G~s~~~~   72 (293)
T d1ehya_          10 HYEVQL-PDVKIHYVRE--------GA--GPTLLLLHGWPGFW---WEWS--KVIGPLA-EHYDVIVPDLRGFGDSEKPD   72 (293)
T ss_dssp             EEEEEC-SSCEEEEEEE--------EC--SSEEEEECCSSCCG---GGGH--HHHHHHH-TTSEEEEECCTTSTTSCCCC
T ss_pred             ceEEEE-CCEEEEEEEE--------CC--CCeEEEECCCCCCH---HHHH--HHHHHHh-cCCEEEEecCCcccCCcccc
Confidence            445566 6778887654        22  36889999988762   3343  2233455 58999999999987543221


Q ss_pred             HhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          552 KYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       552 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      .    .......++++...+..++++++   ..++.|+||||||.+++.++.++|+ ++..+++.+|..
T Consensus        73 ~----~~~~~~~~~~~a~~~~~~~~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~  133 (293)
T d1ehya_          73 L----NDLSKYSLDKAADDQAALLDALG---IEKAYVVGHDFAAIVLHKFIRKYSD-RVIKAAIFDPIQ  133 (293)
T ss_dssp             T----TCGGGGCHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHHHHTGG-GEEEEEEECCSC
T ss_pred             c----cccccccchhhhhHHHhhhhhcC---ccccccccccccccchhcccccCcc-ccceeeeeeccC
Confidence            1    11112345666666666666444   5789999999999999999999986 888888887753

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.63  E-value=1.2e-14  Score=157.30  Aligned_cols=247  Identities=24%  Similarity=0.382  Sum_probs=158.5

Q ss_pred             CccceeecCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCc-----CCCcc----------------------
Q psy463            1 MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSS-----QYTQA----------------------   53 (790)
Q Consensus         1 ~~~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~----------------------   53 (790)
                      +|+|++++...++||||||++|||.+.+++.+..+.++..+.......     .++..                      
T Consensus       164 ~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~  243 (470)
T d2bgra1         164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN  243 (470)
T ss_dssp             HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSC
T ss_pred             eeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeeccCCCCCCeeeeeccccccccCCcceEEEEECCCcceeee
Confidence            377888999999999999999999999888776666654432211000     00000                      


Q ss_pred             -----------ccCCCCccccccCCCcce-eEeeeecccceeEEEEeeC--CCCeeeEEE----eecCCCCccccC--Cc
Q psy463           54 -----------INLREPVLSRVNWANESV-VAAWVNRVQNRARITRCSI--NEGTCDVVF----SRDLDRGWFEPF--DH  113 (790)
Q Consensus        54 -----------~~~~~~~~~~~~w~~~~~-~~~~~~r~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~--~~  113 (790)
                                 ......+...+.|.+++. ...|++|.++...+.+|+.  .++....+.    ......+|+...  ..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~  323 (470)
T d2bgra1         244 ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSE  323 (470)
T ss_dssp             CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCC
T ss_pred             ccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeeeccceeecccCCC
Confidence                       000111223456776555 5588899998887777754  556655442    223456787643  46


Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      |.|+++++..++......+         +.|||+++.+++.      ..++|.|.+++..+..++.+   .+||.+....
T Consensus       324 ~~~~~~~~~~~~~~s~~dg---------~~~ly~~~~~g~~------~~~lt~g~~~v~~~~~~d~~---~iyf~a~~~~  385 (470)
T d2bgra1         324 PHFTLDGNSFYKIISNEEG---------YRHICYFQIDKKD------CTFITKGTWEVIGIEALTSD---YLYYISNEYK  385 (470)
T ss_dssp             CEECTTSSEEEEEEECTTS---------CEEEEEEETTCSC------CEESCCSSSCEEEEEEECSS---EEEEEESCGG
T ss_pred             ceeeecCCCcEEEEeccCc---------CceeEEEeccCCc------eeeeccCCeeEEEEEEECCC---EEEEEEecCC
Confidence            8999998776554433332         6799999988774      78999999999999887643   2677654322


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                      ..     +...|||+++++++..     ...||..             .........++++||||++++.+..+.+.+.+
T Consensus       386 ~~-----p~~~~ly~v~~~g~~~-----~~~lt~~-------------~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~  442 (470)
T d2bgra1         386 GM-----PGGRNLYKIQLSDYTK-----VTCLSCE-------------LNPERCQYYSVSFSKEAKYYQLRCSGPGLPLY  442 (470)
T ss_dssp             GC-----TTCBEEEEEETTCTTC-----EEESSTT-------------TSTTTBCBEEEEECTTSSEEEEEECSBSSCEE
T ss_pred             CC-----cceEEEEEEECCCCCc-----eeEeccc-------------ccCCCCCEEEEEECCCCCEEEEEecCCCCCeE
Confidence            21     1236999999998653     2233300             00234456789999999966555554455557


Q ss_pred             EEEECCCCceeEEEE
Q psy463          274 TRCSINEGTCDVVFS  288 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~  288 (790)
                      .+++..+|++..+++
T Consensus       443 ~l~~~~~g~~v~~le  457 (470)
T d2bgra1         443 TLHSSVNDKGLRVLE  457 (470)
T ss_dssp             EEEETTTTEEEEEEE
T ss_pred             EEEECCCCCEEEEEe
Confidence            788888887766654

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.63  E-value=1.3e-14  Score=145.01  Aligned_cols=260  Identities=11%  Similarity=0.066  Sum_probs=163.3

Q ss_pred             cccccC--CceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          114 LRFSSD--GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       114 ~~~spd--g~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ...|||  |++|+|++.              ++||++++++++      .++||.++.....+ .|+|+++. |+|.+..
T Consensus         4 ~~~sPdi~G~~v~f~~~--------------~dl~~~d~~~g~------~~~Lt~~~~~~~~p-~~SPDG~~-iaf~~~~   61 (281)
T d1k32a2           4 LLLNPDIHGDRIIFVCC--------------DDLWEHDLKSGS------TRKIVSNLGVINNA-RFFPDGRK-IAIRVMR   61 (281)
T ss_dssp             CCEEEEEETTEEEEEET--------------TEEEEEETTTCC------EEEEECSSSEEEEE-EECTTSSE-EEEEEEE
T ss_pred             cccCCCCCCCEEEEEeC--------------CcEEEEECCCCC------EEEEecCCCcccCE-EECCCCCE-EEEEEee
Confidence            356999  999999862              389999999885      78899887666554 78998876 7777653


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccC---
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQ---  268 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~---  268 (790)
                      ....      ...+||++++.+++      .++||.......          ........+.|||||+.++++....   
T Consensus        62 ~~~~------~~~~i~~~~~~~g~------~~~lt~~~~~~~----------~~~~~~~~~~~spdg~~l~~~~~~~~~~  119 (281)
T d1k32a2          62 GSSL------NTADLYFYNGENGE------IKRITYFSGKST----------GRRMFTDVAGFDPDGNLIISTDAMQPFS  119 (281)
T ss_dssp             STTC------CEEEEEEEETTTTE------EEECCCCCEEEE----------TTEECSEEEEECTTCCEEEEECTTSSST
T ss_pred             CCCC------CceEEEEEEecCCc------eEEeeecCCCcc----------CccccccccccCCCCCEEEEEEccCCCc
Confidence            2221      22589999999998      455552111111          1123346789999999766665433   


Q ss_pred             cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC--CcCcccEEEEEEcCCCCcccC
Q psy463          269 NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST--PVDSWDHLTFIDLDDQAGIKD  346 (790)
Q Consensus       269 ~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~--~~~~~~~l~~~d~~~~~~~~~  346 (790)
                      ....++.++.+++..+.....         .....|++||..+++....   .....  ...............+.    
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----  183 (281)
T d1k32a2         120 SMTCLYRVENDGINFVPLNLG---------PATHILFADGRRVIGRNTF---ELPHWKGYRGGTRGKIWIEVNSGA----  183 (281)
T ss_dssp             TCCEEEEEEGGGTEEEECCSC---------SCSEEEEETTEEEEEESCS---CCTTSTTCCSTTCCEEEEEEETTE----
T ss_pred             cceeeeeecCCCceeEEecCC---------ccceeeecCCCeEEEeecc---ccceeeeeccCCcceeeeeccccc----
Confidence            234577888777765433211         2357888888888765441   11100  00001122222222332    


Q ss_pred             CCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcE
Q psy463          347 KVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSY  426 (790)
Q Consensus       347 ~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~  426 (790)
                        ...++........ +.++++  .+++......  ..+||.+++++  ++.++||..      .  ......|||||+.
T Consensus       184 --~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~--~~~l~~~d~~g--~~~~~lt~~------~--~~~~~~~SpDG~~  246 (281)
T d1k32a2         184 --FKKIVDMSTHVSS-PVIVGH--RIYFITDIDG--FGQIYSTDLDG--KDLRKHTSF------T--DYYPRHLNTDGRR  246 (281)
T ss_dssp             --EEEEECCSSCCEE-EEEETT--EEEEEECTTS--SCEEEEEETTS--CSCEECCCC------C--SSCEEEEEESSSC
T ss_pred             --eeeccCCccccce-eeeecc--ccceeccccc--ccceEEEeCCC--CceEEeecC------C--CcccccCcCCCCE
Confidence              3344433333332 566654  5677766522  27899999998  678888762      1  2234579999999


Q ss_pred             EEEEeecCCCCeEEEEecCCCeEEEecc
Q psy463          427 YVLSCIGPGIPEIMLFDKTGQRLLYWDT  454 (790)
Q Consensus       427 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~  454 (790)
                      |+|...    .+||++++++++.+.|+.
T Consensus       247 I~f~~~----~~l~~~d~~~g~~~~i~~  270 (281)
T d1k32a2         247 ILFSKG----GSIYIFNPDTEKIEKIEI  270 (281)
T ss_dssp             EEEEET----TEEEEECTTTCCEEECCC
T ss_pred             EEEEeC----CEEEEEECCCCCEEEecc
Confidence            999754    469999999998888754

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.63  E-value=7.4e-15  Score=146.84  Aligned_cols=250  Identities=15%  Similarity=0.139  Sum_probs=151.1

Q ss_pred             eEeCCC--CCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC
Q psy463           13 LWFSPS--GNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI   90 (790)
Q Consensus        13 ~~wSPD--G~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~   90 (790)
                      +..|||  |++|||++..    ++|++++.|++         .++++.....                            
T Consensus         4 ~~~sPdi~G~~v~f~~~~----dl~~~d~~~g~---------~~~Lt~~~~~----------------------------   42 (281)
T d1k32a2           4 LLLNPDIHGDRIIFVCCD----DLWEHDLKSGS---------TRKIVSNLGV----------------------------   42 (281)
T ss_dssp             CCEEEEEETTEEEEEETT----EEEEEETTTCC---------EEEEECSSSE----------------------------
T ss_pred             cccCCCCCCCEEEEEeCC----cEEEEECCCCC---------EEEEecCCCc----------------------------
Confidence            357999  9999999753    59999999985         3444322110                            


Q ss_pred             CCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceE
Q psy463           91 NEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT  170 (790)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~  170 (790)
                                          ...|+|||||++|+|.........       ..+||++++.+++      ..+||.....
T Consensus        43 --------------------~~~p~~SPDG~~iaf~~~~~~~~~-------~~~i~~~~~~~g~------~~~lt~~~~~   89 (281)
T d1k32a2          43 --------------------INNARFFPDGRKIAIRVMRGSSLN-------TADLYFYNGENGE------IKRITYFSGK   89 (281)
T ss_dssp             --------------------EEEEEECTTSSEEEEEEEESTTCC-------EEEEEEEETTTTE------EEECCCCCEE
T ss_pred             --------------------ccCEEECCCCCEEEEEEeeCCCCC-------ceEEEEEEecCCc------eEEeeecCCC
Confidence                                024799999999999876543211       2379999998885      5677665432


Q ss_pred             ------EEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCC
Q psy463          171 ------VTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENN  244 (790)
Q Consensus       171 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~  244 (790)
                            ......|.++++. ++|....... .     ....++.++.+++..      ....                 .
T Consensus        90 ~~~~~~~~~~~~~spdg~~-l~~~~~~~~~-~-----~~~~~~~~~~~~~~~------~~~~-----------------~  139 (281)
T d1k32a2          90 STGRRMFTDVAGFDPDGNL-IISTDAMQPF-S-----SMTCLYRVENDGINF------VPLN-----------------L  139 (281)
T ss_dssp             EETTEECSEEEEECTTCCE-EEEECTTSSS-T-----TCCEEEEEEGGGTEE------EECC-----------------S
T ss_pred             ccCccccccccccCCCCCE-EEEEEccCCC-c-----cceeeeeecCCCcee------EEec-----------------C
Confidence                  2234567777763 4544332111 1     124667777776652      2211                 1


Q ss_pred             CCCEEEEEEEccCCc-EEEEEeccCcc--------eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEE
Q psy463          245 VEPVLSRVNWANESV-VAAWVNRVQNR--------ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLIL  315 (790)
Q Consensus       245 ~~~~~~~~~wspDg~-~~~~~~r~~~~--------~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~  315 (790)
                      .   .....|++||+ .++........        ..........+....++....      ....+.+++|  .+++. 
T Consensus       140 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~~~~-  207 (281)
T d1k32a2         140 G---PATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMST------HVSSPVIVGH--RIYFI-  207 (281)
T ss_dssp             C---SCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSS------CCEEEEEETT--EEEEE-
T ss_pred             C---ccceeeecCCCeEEEeeccccceeeeeccCCcceeeeeccccceeeccCCcc------ccceeeeecc--cccee-
Confidence            1   11356788888 55444332211        112222222233333322111      1345777776  45533 


Q ss_pred             ccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCC
Q psy463          316 SHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPT  395 (790)
Q Consensus       316 ~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~  395 (790)
                      .   +..+      ..+||++|+++++      .++||......  ...|||||++|+|.+..      +||++++++  
T Consensus       208 ~---~~~~------~~~l~~~d~~g~~------~~~lt~~~~~~--~~~~SpDG~~I~f~~~~------~l~~~d~~~--  262 (281)
T d1k32a2         208 T---DIDG------FGQIYSTDLDGKD------LRKHTSFTDYY--PRHLNTDGRRILFSKGG------SIYIFNPDT--  262 (281)
T ss_dssp             E---CTTS------SCEEEEEETTSCS------CEECCCCCSSC--EEEEEESSSCEEEEETT------EEEEECTTT--
T ss_pred             c---cccc------ccceEEEeCCCCc------eEEeecCCCcc--cccCcCCCCEEEEEeCC------EEEEEECCC--
Confidence            3   3566      6799999999988      88998753211  25699999999997643      699999988  


Q ss_pred             CCcceeee
Q psy463          396 ATPECITC  403 (790)
Q Consensus       396 ~~~~~lt~  403 (790)
                      ++.+.|+.
T Consensus       263 g~~~~i~~  270 (281)
T d1k32a2         263 EKIEKIEI  270 (281)
T ss_dssp             CCEEECCC
T ss_pred             CCEEEecc
Confidence            77777764

>d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/thioesterase 1
domain: Uncharacterized protein Mll8374
species: Mesorhizobium loti [TaxId: 381]

Probab=99.63  E-value=2.3e-15  Score=142.86  Aligned_cols=184  Identities=13%  Similarity=0.107  Sum_probs=122.8

Q ss_pred             CCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh-hhccC----CccchhHHHHHH
Q psy463          497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA-GYRRL----GTVEIYDQINVT  571 (790)
Q Consensus       497 ~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~-~~~~~----~~~~~~D~~~~~  571 (790)
                      +.+.+|+||++||.++..   ..|. .+. ..++ .++.+++++.......+..+... .....    ....++++.+.+
T Consensus        19 ~~~~~p~vv~lHG~g~~~---~~~~-~l~-~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l   92 (209)
T d3b5ea1          19 GKESRECLFLLHGSGVDE---TTLV-PLA-RRIA-PTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFT   92 (209)
T ss_dssp             TSSCCCEEEEECCTTBCT---TTTH-HHH-HHHC-TTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEcCCCCCH---HHHH-HHH-HHhc-cCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHH
Confidence            356689999999987652   2332 222 3344 47888888764221111100000 00000    001245555666


Q ss_pred             HHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccc
Q psy463          572 RYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAAL  651 (790)
Q Consensus       572 ~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  651 (790)
                      +.+.++.+ +|.+||+|+|+|+||++++.++.++|+ .++++++.+|......                           
T Consensus        93 ~~~~~~~~-id~~ri~l~G~S~Gg~~a~~~a~~~p~-~~~~~v~~~g~~~~~~---------------------------  143 (209)
T d3b5ea1          93 NEAAKRHG-LNLDHATFLGYSNGANLVSSLMLLHPG-IVRLAALLRPMPVLDH---------------------------  143 (209)
T ss_dssp             HHHHHHHT-CCGGGEEEEEETHHHHHHHHHHHHSTT-SCSEEEEESCCCCCSS---------------------------
T ss_pred             HHHHHHhC-cccCCEEEEeeCChHHHHHHHHHhCCC-cceEEEEeCCcccccc---------------------------
Confidence            66666344 889999999999999999999999985 8999998888532110                           


Q ss_pred             cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEE
Q psy463          652 NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLV  731 (790)
Q Consensus       652 ~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii  731 (790)
                                                                                        ....+..++|++++
T Consensus       144 ------------------------------------------------------------------~~~~~~~~~p~~~~  157 (209)
T d3b5ea1         144 ------------------------------------------------------------------VPATDLAGIRTLII  157 (209)
T ss_dssp             ------------------------------------------------------------------CCCCCCTTCEEEEE
T ss_pred             ------------------------------------------------------------------ccccccccchheee
Confidence                                                                              00011117899999


Q ss_pred             ecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH
Q psy463          732 HGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD  786 (790)
Q Consensus       732 ~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~  786 (790)
                      ||+.|.+++ ..+.++.+.|++.|.++++.++++ +|.+.   ....+.+.+||.
T Consensus       158 ~G~~D~~~~-~~~~~~~~~l~~~G~~v~~~~~~g-gH~i~---~~~~~~~~~wl~  207 (209)
T d3b5ea1         158 AGAADETYG-PFVPALVTLLSRHGAEVDARIIPS-GHDIG---DPDAAIVRQWLA  207 (209)
T ss_dssp             EETTCTTTG-GGHHHHHHHHHHTTCEEEEEEESC-CSCCC---HHHHHHHHHHHH
T ss_pred             eccCCCccC-HHHHHHHHHHHHCCCCeEEEEECC-CCCCC---HHHHHHHHHHhC
Confidence            999999987 677889999999999999999998 79885   344567788874

>d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Enterochelin esterase, catalytic domain
species: Shigella flexneri 2a str. 2457T [TaxId: 198215]

Probab=99.63  E-value=6.3e-16  Score=151.27  Aligned_cols=227  Identities=13%  Similarity=0.000  Sum_probs=134.3

Q ss_pred             CCCceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcC---CeEEEEEcC
Q psy463          466 TLPSVEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNK---DIVVAYIDG  541 (790)
Q Consensus       466 ~~~~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~---G~~v~~~d~  541 (790)
                      ...+++.+.+.+. .|.++..++|.|.++.   .+++|+||++||++....   .........+.++.   .++++.++.
T Consensus        11 ~~~~~~~~~~~S~~lg~~~~~~v~~P~~~~---~~~~Pvvv~lhG~~~~~~---~~~~~~l~~l~~~~~~~~~i~v~~~~   84 (246)
T d3c8da2          11 PEIPAKEIIWKSERLKNSRRVWIFTTGDVT---AEERPLAVLLDGEFWAQS---MPVWPVLTSLTHRQQLPPAVYVLIDA   84 (246)
T ss_dssp             CSSCCEEEEEEETTTTEEEEEEEEEC--------CCCCEEEESSHHHHHHT---SCCHHHHHHHHHTTSSCSCEEEEECC
T ss_pred             CCCCcEEEEEECCCCCCEEEEEEEECCCCC---CCCCCEEEEeCCcchhcc---CcHHHHHHHHHHhCCCCceEEeeccc
Confidence            3445677777764 4889999999999875   467999999999764321   11112233444422   244555543


Q ss_pred             CCCCCChhhhHhhhhccCCccchhHHH-HHHHHHHHhCC-CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          542 RNSALKGNTLKYAGYRRLGTVEIYDQI-NVTRYLQENLP-YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       542 rG~~~~g~~~~~~~~~~~~~~~~~D~~-~~~~~l~~~~~-~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      ..    +......  ...+......+. +.+.++.+++. .+|+++++|+|+||||+.|+.++.++|+ +|+++++.+|.
T Consensus        85 ~~----~~~~~~~--~~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~-~F~a~~~~sg~  157 (246)
T d3c8da2          85 ID----TTHRAHE--LPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPE-RFGCVLSQSGS  157 (246)
T ss_dssp             CS----HHHHHHH--SSSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTT-TCCEEEEESCC
T ss_pred             cc----ccccccc--cCccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCc-hhcEEEcCCcc
Confidence            22    1111111  111111111111 12223333332 3678899999999999999999999986 99999999997


Q ss_pred             CCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhccccc
Q psy463          620 TDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYM  699 (790)
Q Consensus       620 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~  699 (790)
                      .++.....             .....+.                                                    
T Consensus       158 ~~~~~~~~-------------~~~~~~~----------------------------------------------------  172 (246)
T d3c8da2         158 YWWPHRGG-------------QQEGVLL----------------------------------------------------  172 (246)
T ss_dssp             TTTTCTTS-------------SSCCHHH----------------------------------------------------
T ss_pred             cccccCCc-------------cchHHHH----------------------------------------------------
Confidence            66532110             0000000                                                    


Q ss_pred             CCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHH
Q psy463          700 GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYH  779 (790)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~  779 (790)
                                   ...+....... ..|+++.+|+.|..+ ..+++.|+++|+++|+++++.++|| ||... .+...+.
T Consensus       173 -------------~~~~~~~~~~~-~~~~~l~~G~~D~~~-~~~~~~l~~~L~~~g~~~~~~~~~G-gH~~~-~W~~~l~  235 (246)
T d3c8da2         173 -------------EKLKAGEVSAE-GLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-GHDAL-CWRGGLM  235 (246)
T ss_dssp             -------------HHHHTTSSCCC-SCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSCHH-HHHHHHH
T ss_pred             -------------HHhhhhhhhcc-CCCeEEEecCCCcch-hHHHHHHHHHHHHCCCCEEEEEeCC-CCChH-HHHHHHH
Confidence                         00011223334 789999999999877 4778999999999999999999998 89554 2334444


Q ss_pred             HHHHHHHH
Q psy463          780 TLERFLDS  787 (790)
Q Consensus       780 ~i~~fl~~  787 (790)
                      ..+.||-+
T Consensus       236 ~~l~~l~~  243 (246)
T d3c8da2         236 QGLIDLWQ  243 (246)
T ss_dssp             HHHHHHHG
T ss_pred             HHHHHHHH
Confidence            44444433

>d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/thioesterase 1
domain: Uncharacterized protein Atu2452
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.63  E-value=3.6e-16  Score=148.15  Aligned_cols=185  Identities=17%  Similarity=0.188  Sum_probs=123.9

Q ss_pred             CCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC-hhhhHhhhhccCCccchhHHHHHHHHHH
Q psy463          497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK-GNTLKYAGYRRLGTVEIYDQINVTRYLQ  575 (790)
Q Consensus       497 ~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~-g~~~~~~~~~~~~~~~~~D~~~~~~~l~  575 (790)
                      ..++.|+||++||.++..   ..|. .+...++  .++.|+.++.+..... ...+.   ....+.....++...++.+.
T Consensus        13 ~~~~~P~vi~lHG~G~~~---~~~~-~~~~~l~--~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   83 (203)
T d2r8ba1          13 GVAGAPLFVLLHGTGGDE---NQFF-DFGARLL--PQATILSPVGDVSEHGAARFFR---RTGEGVYDMVDLERATGKMA   83 (203)
T ss_dssp             CCTTSCEEEEECCTTCCH---HHHH-HHHHHHS--TTSEEEEECCSEEETTEEESSC---BCGGGCBCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCH---HHHH-HHHHHhc--cCCeEEEecccccccccccccc---ccCccccchhHHHHHHHHHH
Confidence            455689999999987652   2232 2333333  4788888876532211 11110   11111223344433333332


Q ss_pred             H----hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccc
Q psy463          576 E----NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAAL  651 (790)
Q Consensus       576 ~----~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  651 (790)
                      .    ....++.++++++|+|+||.+++.++..+|. .+.++++.+|......                           
T Consensus        84 ~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~-~~~~~~~~~~~~~~~~---------------------------  135 (203)
T d2r8ba1          84 DFIKANREHYQAGPVIGLGFSNGANILANVLIEQPE-LFDAAVLMHPLIPFEP---------------------------  135 (203)
T ss_dssp             HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTT-TCSEEEEESCCCCSCC---------------------------
T ss_pred             HHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhh-cccceeeecccccccc---------------------------
Confidence            1    1123678999999999999999999998885 7788888777532110                           


Q ss_pred             cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEE
Q psy463          652 NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLV  731 (790)
Q Consensus       652 ~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii  731 (790)
                                                              .                         ...... ..|++++
T Consensus       136 ----------------------------------------~-------------------------~~~~~~-~~~~~i~  149 (203)
T d2r8ba1         136 ----------------------------------------K-------------------------ISPAKP-TRRVLIT  149 (203)
T ss_dssp             ----------------------------------------C-------------------------CCCCCT-TCEEEEE
T ss_pred             ----------------------------------------c-------------------------cccccc-cchhhcc
Confidence                                                    0                         000112 6899999


Q ss_pred             ecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463          732 HGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC  788 (790)
Q Consensus       732 ~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~  788 (790)
                      ||++|.+||++++++++++|++.|+++++.+|++ +|.+.   .+..+.+.+||.+|
T Consensus       150 hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~---~~~~~~~~~wl~~~  202 (203)
T d2r8ba1         150 AGERDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEIR---SGEIDAVRGFLAAY  202 (203)
T ss_dssp             EETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSCC---HHHHHHHHHHHGGG
T ss_pred             ccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC---HHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999997 79974   35678899999875

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.61  E-value=6.8e-15  Score=152.70  Aligned_cols=335  Identities=10%  Similarity=0.020  Sum_probs=189.8

Q ss_pred             CceeEeCC-CCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccC-CCCccccccCCCcceeEeeeecccceeEEEE
Q psy463           10 SSALWFSP-SGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINL-REPVLSRVNWANESVVAAWVNRVQNRARITR   87 (790)
Q Consensus        10 ~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~   87 (790)
                      ..+..||| ||++|||++.    .++|+++..++.         .+++ +......+.|++|++.+....... ...+.+
T Consensus         5 ~~~~~fSP~dG~~~a~~~~----g~v~v~d~~~~~---------~~~~~~~~~v~~~~~spDg~~l~~~~~~~-g~~v~v   70 (360)
T d1k32a3           5 KFAEDFSPLDGDLIAFVSR----GQAFIQDVSGTY---------VLKVPEPLRIRYVRRGGDTKVAFIHGTRE-GDFLGI   70 (360)
T ss_dssp             GGEEEEEECGGGCEEEEET----TEEEEECTTSSB---------EEECSCCSCEEEEEECSSSEEEEEEEETT-EEEEEE
T ss_pred             hhcccccCCCCCEEEEEEC----CeEEEEECCCCc---------EEEccCCCCEEEEEECCCCCEEEEEEcCC-CCEEEE
Confidence            45678999 9999999874    378999998884         1221 223345678999999887765543 334778


Q ss_pred             eeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecccc
Q psy463           88 CSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG  167 (790)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~  167 (790)
                      ++..++..+.+.....      .....+|||||+.|++...             ..++++++++++.      ...+...
T Consensus        71 ~d~~~~~~~~~~~~~~------~v~~~~~spdg~~l~~~~~-------------~~~~~~~~~~~~~------~~~~~~~  125 (360)
T d1k32a3          71 YDYRTGKAEKFEENLG------NVFAMGVDRNGKFAVVAND-------------RFEIMTVDLETGK------PTVIERS  125 (360)
T ss_dssp             EETTTCCEEECCCCCC------SEEEEEECTTSSEEEEEET-------------TSEEEEEETTTCC------EEEEEEC
T ss_pred             EECCCCcEEEeeCCCc------eEEeeeecccccccceecc-------------ccccccccccccc------eeeeeec
Confidence            8888776554322111      1124589999999997653             2278999988774      2222222


Q ss_pred             ceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCC
Q psy463          168 RFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEP  247 (790)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~  247 (790)
                      ......-..|.++++. ++|........  ........++++++.+++      ...++                 ....
T Consensus       126 ~~~~~~~~~~spdg~~-la~~~~~~~~~--~~~~~~~~~~v~d~~~~~------~~~~~-----------------~~~~  179 (360)
T d1k32a3         126 REAMITDFTISDNSRF-IAYGFPLKHGE--TDGYVMQAIHVYDMEGRK------IFAAT-----------------TENS  179 (360)
T ss_dssp             SSSCCCCEEECTTSCE-EEEEEEECSST--TCSCCEEEEEEEETTTTE------EEECS-----------------CSSS
T ss_pred             ccccccchhhccceee-eeeeccccccc--eeeccccceeeeccccCc------eeeec-----------------cccc
Confidence            2222223567776653 44443321111  001233578888988876      34444                 4455


Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-----eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-----DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-----~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      ....+.|||||+.+++......   +...+......     ..+.......   .....+.|+|||+.++. ...  ...
T Consensus       180 ~~~~~~~spdg~~l~~~s~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~-~~~--~~~  250 (360)
T d1k32a3         180 HDYAPAFDADSKNLYYLSYRSL---DPSPDRVVLNFSFEVVSKPFVIPLIP---GSPNPTKLVPRSMTSEA-GEY--DLN  250 (360)
T ss_dssp             BEEEEEECTTSCEEEEEESCCC---CCEECSSSSCEECCSCBEEEEEESST---TCCCGGGCCCGGGSCCC-CCC--CCT
T ss_pred             ccccccccCCCCEEEEEeCCCc---eEcccccccceeeccccceEEEeccc---CccccceECCCcCcccc-cce--eec
Confidence            6778999999995555433221   22222222111     1111111100   11346789999987652 221  122


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT  402 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt  402 (790)
                      +     ....++.+++.++.      ...+......+. .+.+.+++....+.+..  .....|++.++++  ++.+.++
T Consensus       251 ~-----~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~i~~~d~~~--~~~~~~~  314 (360)
T d1k32a3         251 D-----MYKRSSPINVDPGD------YRMIIPLESSIL-IYSVPVHGEFAAYYQGA--PEKGVLLKYDVKT--RKVTEVK  314 (360)
T ss_dssp             T-----GGGGCEECSCCCBC------EEEEEECSSEEE-EEECCCCCSHHHHHHCC--CCCEEEEEEETTT--CCEEEEE
T ss_pred             c-----cccceeecccCcCc------eeEeeecCCCce-EEEEEecCCCeeEEEec--CCCCEEEEEECCC--CeEEEec
Confidence            2     13356677766665      555543332222 24444444432222222  1226788889877  4544443


Q ss_pred             ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      .          .+..++|||||++|++....   ..|++++++.+
T Consensus       315 ~----------~v~~~~~SpDG~~l~~~~~D---g~i~v~d~~~~  346 (360)
T d1k32a3         315 N----------NLTDLRLSADRKTVMVRKDD---GKIYTFPLEKP  346 (360)
T ss_dssp             E----------EEEEEEECTTSCEEEEEETT---SCEEEEESSCT
T ss_pred             C----------CcCEEEECCCCCEEEEEECC---CeEEEEECCCC
Confidence            2          46789999999999775433   45889988663

>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Mycobacterial antigens
domain: Antigen 85a
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.61  E-value=5.6e-15  Score=148.26  Aligned_cols=253  Identities=13%  Similarity=0.042  Sum_probs=148.9

Q ss_pred             eEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-cchHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          470 VEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       470 ~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ++.+++.++ .|.++...++.|       .+++|+|+++||+++... ...|. ..-...++++.|++|++++..+.+..
T Consensus         9 v~~~~~~s~~~~r~~~~~v~~p-------~~~~Pvl~llhG~~~~~d-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~   80 (288)
T d1sfra_           9 VEYLQVPSPSMGRDIKVQFQSG-------GANSPALYLLDGLRAQDD-FSGWDINTPAFEWYDQSGLSVVMPVGGQSSFY   80 (288)
T ss_dssp             CEEEEEEETTTTEEEEEEEECC-------STTBCEEEEECCTTCCSS-SCHHHHHCCHHHHHTTSSCEEEEECCCTTCTT
T ss_pred             EEEEEEECCCCCcEEEEEEeCC-------CCCceEEEEcCCCCCCCc-chhhhhhccHHHHHHhCCCEEEEeccCCCCCC
Confidence            345566544 577787777655       357899999999776532 11221 12234667778999999998765443


Q ss_pred             hhhhHhhhhc-cC--CccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc
Q psy463          548 GNTLKYAGYR-RL--GTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY  624 (790)
Q Consensus       548 g~~~~~~~~~-~~--~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~  624 (790)
                      +..+...... ..  ......-+.+.+.++.++++ +|++|++|+|+||||++|+.++.++|+ +|+++++.+|..+...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~-~d~~r~~i~G~S~GG~~A~~~a~~~pd-~f~av~~~Sg~~~~~~  158 (288)
T d1sfra_          81 SDWYQPACGKAGCQTYKWETFLTSELPGWLQANRH-VKPTGSAVVGLSMAASSALTLAIYHPQ-QFVYAGAMSGLLDPSQ  158 (288)
T ss_dssp             CBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHC-BCSSSEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCCSCTTS
T ss_pred             ccccCcccccccccchhHHHHHHHHhHHHHHHhcC-CCCCceEEEEEccHHHHHHHHHHhccc-cccEEEEecCcccccc
Confidence            3221111000 00  01111223456677777655 899999999999999999999999986 9999999999876542


Q ss_pred             ccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463          625 YDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTF  704 (790)
Q Consensus       625 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  704 (790)
                      ........            ............++.                              +.             
T Consensus       159 ~~~~~~~~------------~~~~~~~~~~~~~~~------------------------------g~-------------  183 (288)
T d1sfra_         159 AMGPTLIG------------LAMGDAGGYKASDMW------------------------------GP-------------  183 (288)
T ss_dssp             TTHHHHHH------------HHHHHTTSCCHHHHH------------------------------CS-------------
T ss_pred             cccchhhh------------hhhhhcccccHhhhc------------------------------CC-------------
Confidence            21100000            000000000000000                              00             


Q ss_pred             CCcchhhhhhhhhhhhhcc--CCccEEEEecCCCcccch--------------hhhHHHHHHHHhcCCceEEEEcCCC-C
Q psy463          705 EDNLEGYKIAALNNKVDRI--RDKQYLLVHGTMDDNVHF--------------QQSMMLAKSLQHADIMFQSQTYPDE-E  767 (790)
Q Consensus       705 ~~~~~~~~~~~~~~~~~~i--~~~P~Lii~G~~D~~v~~--------------~~~~~l~~~l~~~g~~~~~~~~p~~-~  767 (790)
                       .....+...++...+++.  ...++++.+|+.|..++.              .++..+.++|.++|++..+.++++. +
T Consensus       184 -~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~e~~~~~~~~~l~~~l~~~g~~~~~~~~~~~G~  262 (288)
T d1sfra_         184 -KEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGT  262 (288)
T ss_dssp             -TTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCC
T ss_pred             -cchhhhHhcCHHHHHHHhhhcCCeEEEEeCCCCCCCccccccccchhHHHHHHHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence             000111111122222221  167899999999987663              5678899999999999999999875 5


Q ss_pred             CcCCCcchHHHHHHHHHHHHhh
Q psy463          768 HGLIGVRPHFYHTLERFLDSCF  789 (790)
Q Consensus       768 H~~~~~~~~~~~~i~~fl~~~l  789 (790)
                      |.+.. +..-+..++.||.+.|
T Consensus       263 H~w~~-w~~~l~~~l~~l~~al  283 (288)
T d1sfra_         263 HSWEY-WGAQLNAMKPDLQRAL  283 (288)
T ss_dssp             SSHHH-HHHHHHHTHHHHHHHH
T ss_pred             cChhH-HHHHHHHHHHHHHHhc
Confidence            96542 3344455667776655

>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Proline aminopeptidase
species: Serratia marcescens [TaxId: 615]

Probab=99.60  E-value=2.3e-14  Score=145.13  Aligned_cols=126  Identities=13%  Similarity=0.048  Sum_probs=87.0

Q ss_pred             EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463          471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT  550 (790)
Q Consensus       471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~  550 (790)
                      +...+++.||.+|++..+.+++        .|.||++||++++   ...|..  ...+++ +||.|+++|.||+|.+...
T Consensus        12 ~~~~v~~~dG~~i~y~~~G~~~--------g~pvvllHG~~~~---~~~w~~--~~~~l~-~~~~vi~~D~rG~G~S~~~   77 (313)
T d1wm1a_          12 DSGWLDTGDGHRIYWELSGNPN--------GKPAVFIHGGPGG---GISPHH--RQLFDP-ERYKVLLFDQRGCGRSRPH   77 (313)
T ss_dssp             EEEEEECSSSCEEEEEEEECTT--------SEEEEEECCTTTC---CCCGGG--GGGSCT-TTEEEEEECCTTSTTCBST
T ss_pred             cCCEEEeCCCcEEEEEEecCCC--------CCeEEEECCCCCc---ccchHH--HHHHhh-cCCEEEEEeCCCccccccc
Confidence            4456777899999998875431        2567889999887   334432  223444 6999999999998765432


Q ss_pred             hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      ..      .......+..+.+..+..+.   +..++.++|||+||.++..++..+|. +++..+..++..
T Consensus        78 ~~------~~~~~~~~~~~d~~~~~~~~---~~~~~~~vg~s~g~~~~~~~a~~~~~-~v~~~v~~~~~~  137 (313)
T d1wm1a_          78 AS------LDNNTTWHLVADIERLREMA---GVEQWLVFGGSWGSTLALAYAQTHPE-RVSEMVLRGIFT  137 (313)
T ss_dssp             TC------CTTCSHHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGG-GEEEEEEESCCC
T ss_pred             cc------ccccchhhHHHHHHhhhhcc---CCCcceeEeeecCCchhhHHHHHHhh-hheeeeeccccc
Confidence            11      11123445555555555533   35789999999999999999998886 788777776654

>d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/thioesterase 1
domain: Carboxylesterase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.58  E-value=2.9e-14  Score=136.19  Aligned_cols=117  Identities=20%  Similarity=0.237  Sum_probs=91.5

Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR  659 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  659 (790)
                      .+|.+|++++|+|+||.+|+.++..+++..++++++.++......                .                  
T Consensus       102 ~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~----------------~------------------  147 (218)
T d1auoa_         102 GIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG----------------D------------------  147 (218)
T ss_dssp             TCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC----------------T------------------
T ss_pred             CCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccc----------------c------------------
Confidence            378899999999999999998876565568888888887421100                0                  


Q ss_pred             CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCccc
Q psy463          660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV  739 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v  739 (790)
                                                    ...                         ...... +.|+|++||+.|.+|
T Consensus       148 ------------------------------~~~-------------------------~~~~~~-~~pvl~~hG~~D~vv  171 (218)
T d1auoa_         148 ------------------------------ELE-------------------------LSASQQ-RIPALCLHGQYDDVV  171 (218)
T ss_dssp             ------------------------------TCC-------------------------CCHHHH-TCCEEEEEETTCSSS
T ss_pred             ------------------------------ccc-------------------------cchhcc-CCCEEEEecCCCCcc
Confidence                                          000                         001122 689999999999999


Q ss_pred             chhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          740 HFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       740 ~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                      |.+.++++++.|++.|.++++..|| .+|.+.   .+.+..+.+||.+.|.
T Consensus       172 p~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~---~~~~~~i~~wl~~~lg  218 (218)
T d1auoa_         172 QNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL---PQEIHDIGAWLAARLG  218 (218)
T ss_dssp             CHHHHHHHHHHHHTTTCCEEEEEES-CSSSCC---HHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEEEC-CCCccC---HHHHHHHHHHHHHhcC
Confidence            9999999999999999999999998 589874   4567899999998874

>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hypothetical protein VC1974
domain: Hypothetical protein VC1974
species: Vibrio cholerae [TaxId: 666]

Probab=99.53  E-value=8e-14  Score=136.98  Aligned_cols=101  Identities=13%  Similarity=0.067  Sum_probs=63.6

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHh
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN  577 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~  577 (790)
                      +.+.|+||++||.+++.   ..|.  .....+++.||.|+++|+||+|.+......         ...+...+...+.. 
T Consensus        13 ~~~~P~ivllHG~~~~~---~~~~--~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~---------~~~~~~~~~~~~~~-   77 (264)
T d1r3da_          13 TARTPLVVLVHGLLGSG---ADWQ--PVLSHLARTQCAALTLDLPGHGTNPERHCD---------NFAEAVEMIEQTVQ-   77 (264)
T ss_dssp             BTTBCEEEEECCTTCCG---GGGH--HHHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHH-
T ss_pred             CCCCCeEEEeCCCCCCH---HHHH--HHHHHHHhCCCEEEEEeccccccccccccc---------ccchhhhhhhhccc-
Confidence            44568999999988762   3333  334455557999999999998865433111         11111222222222 


Q ss_pred             CCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEE
Q psy463          578 LPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCG  613 (790)
Q Consensus       578 ~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~  613 (790)
                      .......++.++||||||.+++.++.++|....+.+
T Consensus        78 ~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~  113 (264)
T d1r3da_          78 AHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLR  113 (264)
T ss_dssp             TTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEE
T ss_pred             ccccccCceeeeeecchHHHHHHHHHhCchhccccc
Confidence            223455789999999999999999999987444433

>d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]

Probab=99.50  E-value=1.1e-13  Score=138.83  Aligned_cols=128  Identities=8%  Similarity=-0.108  Sum_probs=80.1

Q ss_pred             CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC
Q psy463          467 LPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL  546 (790)
Q Consensus       467 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~  546 (790)
                      +++.+.+.+   +|.++++...        +  ..|.||++||.+++   ...|.. .. ..++ .+|.|+++|+||+|.
T Consensus         7 ~~~~~fi~~---~g~~i~y~~~--------G--~g~~vvllHG~~~~---~~~~~~-~~-~~L~-~~~~vi~~Dl~G~G~   67 (298)
T d1mj5a_           7 FGEKKFIEI---KGRRMAYIDE--------G--TGDPILFQHGNPTS---SYLWRN-IM-PHCA-GLGRLIACDLIGMGD   67 (298)
T ss_dssp             SSCCEEEEE---TTEEEEEEEE--------S--CSSEEEEECCTTCC---GGGGTT-TG-GGGT-TSSEEEEECCTTSTT
T ss_pred             CCCCEEEEE---CCEEEEEEEE--------c--CCCcEEEECCCCCC---HHHHHH-HH-HHHh-cCCEEEEEeCCCCCC
Confidence            334444443   8899987754        2  22678899999876   334442 22 3344 579999999999876


Q ss_pred             ChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          547 KGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       547 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      +...-..   .. ......+..+.+..+....  ...+++.++||||||.+++.++.++|. .++.++...+..
T Consensus        68 S~~~~~~---~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~l~~~~~~~  134 (298)
T d1mj5a_          68 SDKLDPS---GP-ERYAYAEHRDYLDALWEAL--DLGDRVVLVVHDWGSALGFDWARRHRE-RVQGIAYMEAIA  134 (298)
T ss_dssp             SCCCSSC---ST-TSSCHHHHHHHHHHHHHHT--TCTTCEEEEEEHHHHHHHHHHHHHTGG-GEEEEEEEEECC
T ss_pred             CCCCccc---cc-cccccchhhhhhccccccc--cccccCeEEEecccchhHHHHHHHHHh-hhheeecccccc
Confidence            5432110   01 1122333333333333212  335789999999999999999999986 777777666543

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.48  E-value=2.6e-12  Score=132.78  Aligned_cols=191  Identities=13%  Similarity=0.132  Sum_probs=132.6

Q ss_pred             ccccc-CCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          114 LRFSS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       114 ~~~sp-dg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      +.||| ||+++++.+.              ++||+++++++.      ..+++++ ..+.. ..|+|+++. +++.+...
T Consensus         8 ~~fSP~dG~~~a~~~~--------------g~v~v~d~~~~~------~~~~~~~-~~v~~-~~~spDg~~-l~~~~~~~   64 (360)
T d1k32a3           8 EDFSPLDGDLIAFVSR--------------GQAFIQDVSGTY------VLKVPEP-LRIRY-VRRGGDTKV-AFIHGTRE   64 (360)
T ss_dssp             EEEEECGGGCEEEEET--------------TEEEEECTTSSB------EEECSCC-SCEEE-EEECSSSEE-EEEEEETT
T ss_pred             ccccCCCCCEEEEEEC--------------CeEEEEECCCCc------EEEccCC-CCEEE-EEECCCCCE-EEEEEcCC
Confidence            57999 9999999762              289999998774      4556543 34443 689998764 55554321


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                                ...|+++|+++++      ..+++                 .....+..+.|||||++++......   .
T Consensus        65 ----------g~~v~v~d~~~~~------~~~~~-----------------~~~~~v~~~~~spdg~~l~~~~~~~---~  108 (360)
T d1k32a3          65 ----------GDFLGIYDYRTGK------AEKFE-----------------ENLGNVFAMGVDRNGKFAVVANDRF---E  108 (360)
T ss_dssp             ----------EEEEEEEETTTCC------EEECC-----------------CCCCSEEEEEECTTSSEEEEEETTS---E
T ss_pred             ----------CCEEEEEECCCCc------EEEee-----------------CCCceEEeeeecccccccceecccc---c
Confidence                      1468999999887      34444                 5566678999999999666554433   3


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      ++.++++++++..+......     ....++|||||+.|++....   ............++++++.+++      ...+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~spdg~~la~~~~~---~~~~~~~~~~~~~~v~d~~~~~------~~~~  174 (360)
T d1k32a3         109 IMTVDLETGKPTVIERSREA-----MITDFTISDNSRFIAYGFPL---KHGETDGYVMQAIHVYDMEGRK------IFAA  174 (360)
T ss_dssp             EEEEETTTCCEEEEEECSSS-----CCCCEEECTTSCEEEEEEEE---CSSTTCSCCEEEEEEEETTTTE------EEEC
T ss_pred             cccccccccceeeeeecccc-----cccchhhccceeeeeeeccc---cccceeeccccceeeeccccCc------eeee
Confidence            89999999988777654321     14579999999999976541   1110000114578899998887      7777


Q ss_pred             cCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          353 TRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       353 t~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      +.+...... +.|+|||+.|++.+.+
T Consensus       175 ~~~~~~~~~-~~~spdg~~l~~~s~~  199 (360)
T d1k32a3         175 TTENSHDYA-PAFDADSKNLYYLSYR  199 (360)
T ss_dssp             SCSSSBEEE-EEECTTSCEEEEEESC
T ss_pred             ccccccccc-ccccCCCCEEEEEeCC
Confidence            776555554 7899999999998865

>d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: A novel bacterial esterase
domain: A novel bacterial esterase
species: Alcaligenes sp. [TaxId: 512]

Probab=99.45  E-value=3.1e-15  Score=152.70  Aligned_cols=71  Identities=11%  Similarity=0.061  Sum_probs=60.1

Q ss_pred             hhhhccCCccEEEEecCCCcccch-----hhhHHHHHHHHhcCCceEEEEcC-----CCCCcCCC--cchHHHHHHHHHH
Q psy463          718 NKVDRIRDKQYLLVHGTMDDNVHF-----QQSMMLAKSLQHADIMFQSQTYP-----DEEHGLIG--VRPHFYHTLERFL  785 (790)
Q Consensus       718 ~~~~~i~~~P~Lii~G~~D~~v~~-----~~~~~l~~~l~~~g~~~~~~~~p-----~~~H~~~~--~~~~~~~~i~~fl  785 (790)
                      .....+ ++|+|++||++|..+|.     ..+..+++.++++|.+++++.+|     |++|+++.  +++++.+.|.+||
T Consensus       235 ~~~~~~-~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL  313 (318)
T d1qlwa_         235 DVKPLT-SIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWI  313 (318)
T ss_dssp             GCGGGT-TSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHH
T ss_pred             hhhhhc-cCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHH
Confidence            455667 89999999999999984     45667889999999999999987     56799876  5689999999999


Q ss_pred             HHhh
Q psy463          786 DSCF  789 (790)
Q Consensus       786 ~~~l  789 (790)
                      +++-
T Consensus       314 ~~~~  317 (318)
T d1qlwa_         314 GRNT  317 (318)
T ss_dssp             HHTC
T ss_pred             Hhcc
Confidence            9873

>d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hypothetical esterase YJL068C
domain: Hypothetical esterase YJL068C
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.45  E-value=9.5e-13  Score=130.27  Aligned_cols=250  Identities=16%  Similarity=0.196  Sum_probs=142.9

Q ss_pred             eEEEEEEcC-CCcEEEEEEEeCCCCCC---CCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcCCCC
Q psy463          470 VEYMSVPIQ-PNMEAQVKLFLPPGIDT---SGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDGRNS  544 (790)
Q Consensus       470 ~~~~~~~~~-dg~~i~~~~~~P~~~~~---~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~rG~  544 (790)
                      ...+++.+. -|.+....+|+|+++..   ...+++|+|+++||.++..   ..|.. ......+.+.+++|+.++....
T Consensus        14 ~~~~s~~S~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~---~~w~~~~~~~~~~~~~~~~vv~~~~~p~   90 (299)
T d1pv1a_          14 LIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTP---DNASEKAFWQFQADKYGFAIVFPDTSPR   90 (299)
T ss_dssp             EEEEEEECSSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCH---HHHHHHSCHHHHHHHHTCEEEECCSSCC
T ss_pred             EEEEEEECcccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCH---HHHHHhhhHHHHHHHcCCceecCCCccc
Confidence            445566654 47899999999998741   1346799999999987762   23321 1234455567899998874221


Q ss_pred             CC-------------ChhhhH-hhhhccC-CccchhHHH--HHHHHHHHhCCC------cCCCceEEEEechHHHHHHHH
Q psy463          545 AL-------------KGNTLK-YAGYRRL-GTVEIYDQI--NVTRYLQENLPY------IDKTRTAIWGWSYGGYATGLA  601 (790)
Q Consensus       545 ~~-------------~g~~~~-~~~~~~~-~~~~~~D~~--~~~~~l~~~~~~------~d~~ri~i~G~S~GG~~a~~~  601 (790)
                      ..             ....+. +.....+ +...+++.+  +.+.++.++++.      .+.++.+|.|+||||+.|+.+
T Consensus        91 ~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~  170 (299)
T d1pv1a_          91 GDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICG  170 (299)
T ss_dssp             STTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHH
T ss_pred             ccccCCcccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHH
Confidence            00             000000 0000000 011222322  234455444442      123679999999999999999


Q ss_pred             HhcCC-CCceEEEEEeCCCCCcccccc--cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhh
Q psy463          602 LALDP-SNVFKCGISVAPVTDWIYYDT--IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQ  678 (790)
Q Consensus       602 a~~~p-~~~~~~~v~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~  678 (790)
                      +.+++ ...|.++++.+|+.++.....  .....+++..     ...+..                              
T Consensus       171 al~~~~p~~f~~~~s~s~~~~~~~~~~~~~~~~~~~g~~-----~~~~~~------------------------------  215 (299)
T d1pv1a_         171 YLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEE-----KAQWEA------------------------------  215 (299)
T ss_dssp             HHHTGGGTCCSEEEEESCCCCSTTSHHHHHHHHHHSCC---------CGG------------------------------
T ss_pred             HHHhcCCCceEEEeeccCcCCcccccchhhhhhhhcccc-----hhhhhh------------------------------
Confidence            87642 358999999999876532110  0000111110     000000                              


Q ss_pred             HHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchh-hhHHHHHHHHhcCCc
Q psy463          679 SMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIM  757 (790)
Q Consensus       679 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~  757 (790)
                                                      +....+....++....++++..|++|...+.. ..+.+.+++++++.+
T Consensus       216 --------------------------------~~~~~l~~~~~~~~~~~i~~~~G~~D~~~~~~~~~~~f~~~~~~~g~~  263 (299)
T d1pv1a_         216 --------------------------------YDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQ  263 (299)
T ss_dssp             --------------------------------GCHHHHGGGSCCCTTCCEEEECCTTCTTTTTTCCTHHHHHHHTTSTTT
T ss_pred             --------------------------------cCHHHHHHHhhccCCcceeEecCCCCcchhhhhcHHHHHHHHHhcCCC
Confidence                                            01111112222222467888899999877654 457899999988875


Q ss_pred             --eEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463          758 --FQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA  790 (790)
Q Consensus       758 --~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~  790 (790)
                        +++...||.+|... .+...+...+.|+.++|.
T Consensus       264 ~~~~~~~~~G~~Hsw~-yW~~~i~~~l~f~a~~lg  297 (299)
T d1pv1a_         264 DYVEIKKVHGFDHSYY-FVSTFVPEHAEFHARNLG  297 (299)
T ss_dssp             TSEEEECCTTCCSSHH-HHHHHHHHHHHHHHHHTT
T ss_pred             cceEEEecCCCCcCHH-HHHHHHHHHHHHHHHhcC
Confidence              56777788789764 355666777889888764

>d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Feruloyl esterase domain of the cellulosomal xylanase y
species: Clostridium thermocellum [TaxId: 1515]

Probab=99.41  E-value=2.6e-13  Score=134.80  Aligned_cols=148  Identities=12%  Similarity=0.052  Sum_probs=94.4

Q ss_pred             CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc--ch---HHH---HHhcCCeEEEEE
Q psy463          468 PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV--DW---NLY---LADNKDIVVAYI  539 (790)
Q Consensus       468 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~--~~---~~~---~~~~~G~~v~~~  539 (790)
                      ++.+.++++..+| +..+.+|+|++++  +.+++|+|+++||+++...  ..+..  ..   ...   ......+.|+.+
T Consensus        25 g~v~~~~~~~~~~-~r~~~vylP~~y~--~~k~yPvl~~lhG~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   99 (273)
T d1wb4a1          25 GRIVKETYTGING-TKSLNVYLPYGYD--PNKKYNIFYLMHGGGENEN--TIFSNDVKLQNILDHAIMNGELEPLIVVTP   99 (273)
T ss_dssp             CEEEEEEEEETTE-EEEEEEEECTTCC--TTSCCEEEEEECCTTCCTT--STTSTTTCHHHHHHHHHHHTSSCCEEEEEC
T ss_pred             CeEEEEEEecCCC-eEEEEEEeCCCCC--CCCCceEEEEEeCCCCCcc--hhhhhccchhHHHHhhhhhhccCCceeecc
Confidence            5678888888777 5689999999998  7889999999999887532  11211  11   111   112347889999


Q ss_pred             cCCCCCCChhhhHhhhhccCCc-cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC
Q psy463          540 DGRNSALKGNTLKYAGYRRLGT-VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP  618 (790)
Q Consensus       540 d~rG~~~~g~~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~  618 (790)
                      +.++....+..+.......... ....+....++.+.. ...+|+++++|+|+|+||++|+.++.++|+ +|+++++.+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd-~f~a~~~~sg  177 (273)
T d1wb4a1         100 TFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQ-GIAASRMHRGFGGFAMGGLTTWYVMVNCLD-YVAYFMPLSG  177 (273)
T ss_dssp             CSCSTTCCTTTHHHHHHHTHHHHHHHHSCCSCSSCSHH-HHHTTGGGEEEEEETHHHHHHHHHHHHHTT-TCCEEEEESC
T ss_pred             ccCCCCCccccchhcccccccchhhhhhhhhhhhhhhh-cccCCccceEEEeeCCcchhhhhhhhcCCC-cceEEEEeCc
Confidence            9887655444432221111000 000000000111111 113688999999999999999999999985 9999999999


Q ss_pred             CCCc
Q psy463          619 VTDW  622 (790)
Q Consensus       619 ~~~~  622 (790)
                      ...+
T Consensus       178 ~~~~  181 (273)
T d1wb4a1         178 DYWY  181 (273)
T ss_dssp             CCCB
T ss_pred             cccc
Confidence            7544

>d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Mycobacterial antigens
domain: Antigen pt51/mpb51
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.39  E-value=4.4e-12  Score=124.81  Aligned_cols=137  Identities=15%  Similarity=0.098  Sum_probs=90.6

Q ss_pred             ceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-cchHHHHHhcCCeEEEEEcCCCCCC
Q psy463          469 SVEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNLYLADNKDIVVAYIDGRNSAL  546 (790)
Q Consensus       469 ~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~~~~~G~~v~~~d~rG~~~  546 (790)
                      ++|.+++.++ .|..+...++.|         ..|+|+++||..+... ...|. ..-..+.++..+++|++||.-..+.
T Consensus         3 ~~e~~~v~s~~~~r~~~~~v~~~---------~~pvlylLhG~~g~~~-~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~   72 (267)
T d1r88a_           3 PYENLMVPSPSMGRDIPVAFLAG---------GPHAVYLLDAFNAGPD-VSNWVTAGNAMNTLAGKGISVVAPAGGAYSM   72 (267)
T ss_dssp             CCEEEEEEETTTTEEEEEEEECC---------SSSEEEEECCSSCCSS-SCHHHHTSCHHHHHTTSSSEEEEECCCTTST
T ss_pred             ceEEEEEecccCCceeeEEEECC---------CCCEEEEcCCCCCCCC-cchhhhccHHHHHHhhCCeEEEEECCCCCcC
Confidence            4667777765 467788777643         2389999999655422 12232 2223456667899999998532221


Q ss_pred             ChhhhHhhhhccCCccchhHHH--HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463          547 KGNTLKYAGYRRLGTVEIYDQI--NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI  623 (790)
Q Consensus       547 ~g~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~  623 (790)
                       ...+...     +...+++.+  +.+.++.++++ +|++|++|+|+||||+.|+.++.++|+ +|+++++.+|..+..
T Consensus        73 -y~~~~~~-----~~~~~~tfl~~eL~~~i~~~~~-~d~~r~~i~G~SmGG~~Al~la~~~Pd-~F~av~~~SG~~~~~  143 (267)
T d1r88a_          73 -YTNWEQD-----GSKQWDTFLSAELPDWLAANRG-LAPGGHAAVGAAQGGYGAMALAAFHPD-RFGFAGSMSGFLYPS  143 (267)
T ss_dssp             -TSBCSSC-----TTCBHHHHHHTHHHHHHHHHSC-CCSSCEEEEEETHHHHHHHHHHHHCTT-TEEEEEEESCCCCTT
T ss_pred             -Ccccccc-----ccccHHHHHHHHHHHHHHHhcC-CCCCceEEEEEcchHHHHHHHHHhCcc-cccEEEEeCCccCCC
Confidence             1111111     112233222  34556666666 889999999999999999999999986 999999999976643

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=3e-10  Score=115.99  Aligned_cols=221  Identities=12%  Similarity=0.077  Sum_probs=130.9

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      .|+|||+.|+..+ .++            .|.++++.....   +....+......+ ....+++++.  +++...    
T Consensus       104 ~~s~dg~~l~s~~-~dg------------~i~iwd~~~~~~---~~~~~~~~~~~~v-~~~~~~~~~~--~l~s~~----  160 (337)
T d1gxra_         104 KLLPDGCTLIVGG-EAS------------TLSIWDLAAPTP---RIKAELTSSAPAC-YALAISPDSK--VCFSCC----  160 (337)
T ss_dssp             EECTTSSEEEEEE-SSS------------EEEEEECCCC-----EEEEEEECSSSCE-EEEEECTTSS--EEEEEE----
T ss_pred             EEcCCCCEEEEee-ccc------------cccccccccccc---ccccccccccccc-cccccccccc--cccccc----
Confidence            6799998876433 222            687888765431   1122233222222 2334555543  332221    


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT  274 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~  274 (790)
                             ....|..+++.+++...     ...                 .....+..+.|+|+|+.++....+.   .+.
T Consensus       161 -------~d~~i~~~~~~~~~~~~-----~~~-----------------~~~~~v~~l~~s~~~~~~~~~~~d~---~v~  208 (337)
T d1gxra_         161 -------SDGNIAVWDLHNQTLVR-----QFQ-----------------GHTDGASCIDISNDGTKLWTGGLDN---TVR  208 (337)
T ss_dssp             -------TTSCEEEEETTTTEEEE-----EEC-----------------CCSSCEEEEEECTTSSEEEEEETTS---EEE
T ss_pred             -------ccccccccccccccccc-----ccc-----------------ccccccccccccccccccccccccc---ccc
Confidence                   12467888887765211     111                 3345577899999999655554332   388


Q ss_pred             EEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC
Q psy463          275 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR  354 (790)
Q Consensus       275 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~  354 (790)
                      ++++.+++.........      ......|+|+++.|+ +.+    .+|        .+.++|+.+++      ......
T Consensus       209 i~d~~~~~~~~~~~~~~------~i~~l~~~~~~~~l~-~~~----~d~--------~i~i~d~~~~~------~~~~~~  263 (337)
T d1gxra_         209 SWDLREGRQLQQHDFTS------QIFSLGYCPTGEWLA-VGM----ESS--------NVEVLHVNKPD------KYQLHL  263 (337)
T ss_dssp             EEETTTTEEEEEEECSS------CEEEEEECTTSSEEE-EEE----TTS--------CEEEEETTSSC------EEEECC
T ss_pred             ccccccceeeccccccc------ceEEEEEcccccccc-eec----ccc--------ccccccccccc------cccccc
Confidence            88998887544433221      134688999999887 454    345        58888988776      444433


Q ss_pred             CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          355 GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       355 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      ....+.. +.|+|||+.|+..+.+     ..|...++..  ++......       ....+..+.||||+++|+..
T Consensus       264 ~~~~i~~-v~~s~~g~~l~s~s~D-----g~i~iwd~~~--~~~~~~~~-------~~~~v~~~~~s~d~~~l~t~  324 (337)
T d1gxra_         264 HESCVLS-LKFAYCGKWFVSTGKD-----NLLNAWRTPY--GASIFQSK-------ESSSVLSCDISVDDKYIVTG  324 (337)
T ss_dssp             CSSCEEE-EEECTTSSEEEEEETT-----SEEEEEETTT--CCEEEEEE-------CSSCEEEEEECTTSCEEEEE
T ss_pred             cccccce-EEECCCCCEEEEEeCC-----CeEEEEECCC--CCEEEEcc-------CCCCEEEEEEeCCCCEEEEE
Confidence            3444554 7899999977766555     3466667665  33322222       34567889999999988654

>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Palmitoyl protein thioesterase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=4.7e-12  Score=124.57  Aligned_cols=101  Identities=17%  Similarity=0.099  Sum_probs=70.1

Q ss_pred             ccEEEEEcCCCCccccccccccchHHHHHh-cCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463          501 YPLLIHVYGGPSSFQVTERFSVDWNLYLAD-NKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP  579 (790)
Q Consensus       501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~  579 (790)
                      +| ||++||.+++.   ..|.. ....+.. ..||.|+++|++|+|.+.....         ..++++.+.+..+.+.. 
T Consensus         3 ~P-vvllHG~~~~~---~~~~~-~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~---------~~~~~~~~~l~~~l~~l-   67 (268)
T d1pjaa_           3 KP-VIVVHGLFDSS---YSFRH-LLEYINETHPGTVVTVLDLFDGRESLRPLW---------EQVQGFREAVVPIMAKA-   67 (268)
T ss_dssp             CC-EEEECCTTCCG---GGGHH-HHHHHHHHSTTCCEEECCSSCSGGGGSCHH---------HHHHHHHHHHHHHHHHC-
T ss_pred             CC-EEEECCCCCCH---HHHHH-HHHHHHhhCCCeEEEEeCCCCCCCCCCccc---------cCHHHHHHHHHHHHhcc-
Confidence            35 56789998763   34431 2223332 2489999999999776543311         33556666666665533 


Q ss_pred             CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                        + +++.++||||||.+|+.+|.++|+.+++.+++.++.
T Consensus        68 --~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~  104 (268)
T d1pjaa_          68 --P-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSP  104 (268)
T ss_dssp             --T-TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCC
T ss_pred             --C-CeEEEEccccHHHHHHHHHHHCCccccceEEEECCC
Confidence              3 799999999999999999999997678888877764

>d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Mycobacterial antigens
domain: Antigen 85c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.36  E-value=5.8e-12  Score=124.98  Aligned_cols=140  Identities=16%  Similarity=0.095  Sum_probs=87.9

Q ss_pred             eEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcCCCCCCC
Q psy463          470 VEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDGRNSALK  547 (790)
Q Consensus       470 ~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~rG~~~~  547 (790)
                      ++.+++.++ .|..+...+.         .+++|+|+++||.++... ...|.. ....+++++.|++|++||....+.+
T Consensus         6 v~~~~~~s~~~~r~i~~~~~---------~~~~p~lyllhG~~g~~d-~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~   75 (280)
T d1dqza_           6 VEYLQVPSASMGRDIKVQFQ---------GGGPHAVYLLDGLRAQDD-YNGWDINTPAFEEYYQSGLSVIMPVGGQSSFY   75 (280)
T ss_dssp             EEEEEEEETTTTEEEEEEEE---------CCSSSEEEECCCTTCCSS-SCHHHHHSCHHHHHTTSSSEEEEECCCTTCTT
T ss_pred             EEEEEEecccCCCcceEEee---------CCCCCEEEECCCCCCCCc-cchhhhcchHHHHHHhCCcEEEEECCCCCCcC
Confidence            445555543 4566665552         235699999999765422 223331 2244667779999999996432221


Q ss_pred             hhhhHhhh--hccCCccchhH--HHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463          548 GNTLKYAG--YRRLGTVEIYD--QINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW  622 (790)
Q Consensus       548 g~~~~~~~--~~~~~~~~~~D--~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~  622 (790)
                      . .+....  ...-+...+++  +.+.+.++.++++ +|+++++|+|+||||+.|+.++.++|+ +|+++++++|..+.
T Consensus        76 ~-~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~-~d~~r~~i~G~SmGG~~Al~lA~~~Pd-~F~av~s~SG~~~~  151 (280)
T d1dqza_          76 T-DWYQPSQSNGQNYTYKWETFLTREMPAWLQANKG-VSPTGNAAVGLSMSGGSALILAAYYPQ-QFPYAASLSGFLNP  151 (280)
T ss_dssp             S-BCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHC-CCSSSCEEEEETHHHHHHHHHHHHCTT-TCSEEEEESCCCCT
T ss_pred             c-cccCCcccccCCcchhHHHHHHHHHHHHHHHhcC-CCCCceEEEEechHHHHHHHHHHhCcC-ceeEEEEecCccCc
Confidence            1 111100  01111112222  2345556666555 789999999999999999999999985 99999999998654

>d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Epoxide hydrolase
domain: Bacterial epoxide hydrolase
species: Aspergillus niger [TaxId: 5061]

Probab=99.31  E-value=1.4e-11  Score=129.04  Aligned_cols=118  Identities=14%  Similarity=0.016  Sum_probs=82.4

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCC------eEEEEEcCCCCCCChhhhH
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKD------IVVAYIDGRNSALKGNTLK  552 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G------~~v~~~d~rG~~~~g~~~~  552 (790)
                      ||.+||+......      .+..|.||++||.|++.   ..|.  .....+++.|      |.|++||+||.|.+.... 
T Consensus        90 ~G~~iHf~h~~~~------~~~~~pLlLlHG~P~s~---~~w~--~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~-  157 (394)
T d1qo7a_          90 EGLTIHFAALFSE------REDAVPIALLHGWPGSF---VEFY--PILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP-  157 (394)
T ss_dssp             TTEEEEEEEECCS------CTTCEEEEEECCSSCCG---GGGH--HHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCC-
T ss_pred             CCEEEEEEEEecc------CCCCCEEEEeccccccH---HHHH--HHHHhhccccCCcccceeeecccccccCCCCCCC-
Confidence            8999999877654      33456788999999983   2232  3334455456      999999999987655321 


Q ss_pred             hhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeC
Q psy463          553 YAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVA  617 (790)
Q Consensus       553 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~  617 (790)
                           ........++.+.+..+...++   ..+..++|||+||.++..++..+|+ .+++++...
T Consensus       158 -----~~~~y~~~~~a~~~~~l~~~lg---~~~~~~vg~~~Gg~v~~~~a~~~p~-~~~~~~l~~  213 (394)
T d1qo7a_         158 -----LDKDFGLMDNARVVDQLMKDLG---FGSGYIIQGGDIGSFVGRLLGVGFD-ACKAVHLNL  213 (394)
T ss_dssp             -----SSSCCCHHHHHHHHHHHHHHTT---CTTCEEEEECTHHHHHHHHHHHHCT-TEEEEEESC
T ss_pred             -----CCCccCHHHHHHHHHHHHhhcc---CcceEEEEecCchhHHHHHHHHhhc-cccceeEee
Confidence                 1112446667777777766444   4788999999999999999998886 555555443

>d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: O-acetyltransferase
domain: Homoserine O-acetyltransferase
species: Leptospira interrogans [TaxId: 173]

Probab=99.25  E-value=1e-09  Score=110.22  Aligned_cols=278  Identities=17%  Similarity=0.155  Sum_probs=155.8

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccc-----ccchH------HHHHhcCCeEEEEEcCCCCCCChh
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERF-----SVDWN------LYLADNKDIVVAYIDGRNSALKGN  549 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~-----~~~~~------~~~~~~~G~~v~~~d~rG~~~~g~  549 (790)
                      .+|.+..+--.+     ..+-++||+.|+..++..+....     ...|-      ...+.-.-|.|+++|..|++....
T Consensus        27 ~~l~Y~t~G~ln-----~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss  101 (362)
T d2pl5a1          27 VVIAYETYGTLS-----SSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSS  101 (362)
T ss_dssp             EEEEEEEEECCC-----TTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSS
T ss_pred             ceEEEEeeeccC-----CCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCccccc
Confidence            456666665433     23458999999987764221100     01121      122334569999999998765322


Q ss_pred             hhHhhh-------hccCCccchhHHHHHHHHHHHhCCCcCCCce-EEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463          550 TLKYAG-------YRRLGTVEIYDQINVTRYLQENLPYIDKTRT-AIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD  621 (790)
Q Consensus       550 ~~~~~~-------~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri-~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~  621 (790)
                      ......       ...+....+.|+.++-+.+.++++ |  +++ +|+|.||||+.|+..|.++|+ .++.+|.+++-..
T Consensus       102 ~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LG-I--~~l~~viG~SmGGmqAl~wA~~yPd-~v~~~v~ia~sa~  177 (362)
T d2pl5a1         102 GPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLG-I--EKLFCVAGGSMGGMQALEWSIAYPN-SLSNCIVMASTAE  177 (362)
T ss_dssp             STTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTT-C--SSEEEEEEETHHHHHHHHHHHHSTT-SEEEEEEESCCSB
T ss_pred             CccccccccccccCcCCccchhHHHHHHHHHHHHHhC-c--CeeEEEeehhHHHHHHHHHHHhCch-Hhhhhcccccccc
Confidence            111100       112334568899998888888766 3  454 488999999999999999996 7887777776433


Q ss_pred             cccccccc----hhhhcCCCCc------cCc-hhhhh---------hccccchhhhccCC--------------cEEEEe
Q psy463          622 WIYYDTIY----SERYMGLPTF------EDN-LEGYK---------IAALNNKVDRIRDK--------------QYLLVH  667 (790)
Q Consensus       622 ~~~~~~~~----~~~~~g~~~~------~~~-~~~~~---------~~~~~~~~~~~~~~--------------p~l~~~  667 (790)
                      .......+    .+.+...|..      ... ..+..         ..+....-+.+...              ..|..+
T Consensus       178 ~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~  257 (362)
T d2pl5a1         178 HSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQ  257 (362)
T ss_dssp             CCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGST
T ss_pred             cCHHHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHH
Confidence            22110000    0001000000      000 00000         00000011111100              000000


Q ss_pred             ecCC-CccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHH
Q psy463          668 GTMD-DNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMM  746 (790)
Q Consensus       668 g~~d-~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~  746 (790)
                      |+.- .+.....-..+.+++...++.                   +..++...+++| ++|+|+|..+.|...|+++.++
T Consensus       258 g~k~~~rfDan~yl~l~~a~~~~Di~-------------------~~~~l~~aL~~I-~AkvLvi~~~sD~lFpp~~~~~  317 (362)
T d2pl5a1         258 GESFVDRFDANSYIYVTKALDHYSLG-------------------KGKELTAALSNA-TCRFLVVSYSSDWLYPPAQSRE  317 (362)
T ss_dssp             TCCSSSCCCHHHHHHHHHHHHHCBCC-------------------SHHHHHHHHTTC-CSEEEEEEETTCCSSCHHHHHH
T ss_pred             HHHHHhcCCHHHHHHHHhhhhccccc-------------------ccccHHHHHhhC-CCCEEEEEeCcccCcCHHHHHH
Confidence            1100 011122222233333332222                   111334568899 9999999999999999999999


Q ss_pred             HHHHHHhcCCceEEEEcCC-CCCcCCC-cchHHHHHHHHHHHH
Q psy463          747 LAKSLQHADIMFQSQTYPD-EEHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       747 l~~~l~~~g~~~~~~~~p~-~~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      +++.|+.+++++++++++. .||.-.. +.+++.+.|.+||++
T Consensus       318 ~a~~l~~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~  360 (362)
T d2pl5a1         318 IVKSLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN  360 (362)
T ss_dssp             HHHHHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCCeEEEEeCCCCCcchhccCHHHHHHHHHHHHcC
Confidence            9999999999999988864 5785544 788899999999973

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.18  E-value=2.1e-08  Score=99.59  Aligned_cols=264  Identities=10%  Similarity=0.078  Sum_probs=151.6

Q ss_pred             EEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceec
Q psy463           85 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  164 (790)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~l  164 (790)
                      +.++|..+++....+....      .+...+|||||++|+.....++            .|.++|+.+++     ....+
T Consensus        14 v~v~D~~t~~~~~~i~~g~------~p~~va~spdG~~l~v~~~~~~------------~i~v~d~~t~~-----~~~~~   70 (301)
T d1l0qa2          14 ISVIDVTSNKVTATIPVGS------NPMGAVISPDGTKVYVANAHSN------------DVSIIDTATNN-----VIATV   70 (301)
T ss_dssp             EEEEETTTTEEEEEEECSS------SEEEEEECTTSSEEEEEEGGGT------------EEEEEETTTTE-----EEEEE
T ss_pred             EEEEECCCCeEEEEEECCC------CceEEEEeCCCCEEEEEECCCC------------EEEEEECCCCc-----eeeee
Confidence            5567777776544332211      1123489999999876554333            79999998774     22333


Q ss_pred             cccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCC
Q psy463          165 TRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENN  244 (790)
Q Consensus       165 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~  244 (790)
                      ..+. .. .-..++++++  .+++....          ...+.+++..+++.     ...+                  .
T Consensus        71 ~~~~-~~-~~~~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~-----~~~~------------------~  113 (301)
T d1l0qa2          71 PAGS-SP-QGVAVSPDGK--QVYVTNMA----------SSTLSVIDTTSNTV-----AGTV------------------K  113 (301)
T ss_dssp             ECSS-SE-EEEEECTTSS--EEEEEETT----------TTEEEEEETTTTEE-----EEEE------------------E
T ss_pred             eccc-cc-cccccccccc--cccccccc----------cceeeeccccccee-----eeec------------------c
Confidence            2222 22 2234556555  33333211          14667777776542     1111                  1


Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      .........++|||+.++......  ..+.+.+..++...........      .....++||++.++....    ..  
T Consensus       114 ~~~~~~~~~~~~dg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~----~~--  179 (301)
T d1l0qa2         114 TGKSPLGLALSPDGKKLYVTNNGD--KTVSVINTVTKAVINTVSVGRS------PKGIAVTPDGTKVYVANF----DS--  179 (301)
T ss_dssp             CSSSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEECCSS------EEEEEECTTSSEEEEEET----TT--
T ss_pred             ccccceEEEeecCCCeeeeeeccc--cceeeeeccccceeeecccCCC------ceEEEeeccccceeeecc----cc--
Confidence            223345788999999555544322  2377788888776655443211      235789999998874332    22  


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc-eeee
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE-CITC  403 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~lt~  403 (790)
                            ..+.+.+....+      ............. ..++++++.+++......  ...|+++++.+  ++.. .+..
T Consensus       180 ------~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~g~~~~v~~~~~~--~~~v~v~D~~t--~~~~~~~~~  242 (301)
T d1l0qa2         180 ------MSISVIDTVTNS------VIDTVKVEAAPSG-IAVNPEGTKAYVTNVDKY--FNTVSMIDTGT--NKITARIPV  242 (301)
T ss_dssp             ------TEEEEEETTTTE------EEEEEECSSEEEE-EEECTTSSEEEEEEECSS--CCEEEEEETTT--TEEEEEEEC
T ss_pred             ------ccccccccccee------eeecccccCCcce-eeccccccccccccccce--eeeeeeeecCC--CeEEEEEcC
Confidence                  245666655544      3222222223333 789999999887765522  15688888866  3322 2221


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                              ......++|||||++++.+...  -..|.++|+++++.
T Consensus       243 --------~~~~~~va~spdg~~l~va~~~--~~~i~v~D~~t~~~  278 (301)
T d1l0qa2         243 --------GPDPAGIAVTPDGKKVYVALSF--CNTVSVIDTATNTI  278 (301)
T ss_dssp             --------CSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEE
T ss_pred             --------CCCEEEEEEeCCCCEEEEEECC--CCeEEEEECCCCeE
Confidence                    2345779999999988665433  34788999887654

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.17  E-value=5.7e-09  Score=104.84  Aligned_cols=250  Identities=13%  Similarity=0.085  Sum_probs=139.2

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      ...+++||||+.|||...  .  .++++.+..+.      .......+...+..+.|++++..+.-....   -.+.+++
T Consensus        20 ~~~~a~~~~g~~l~~~~~--~--~v~i~~~~~~~------~~~~~~~H~~~v~~~~~sp~g~~latg~~d---g~i~iwd   86 (311)
T d1nr0a1          20 AVVLGNTPAGDKIQYCNG--T--SVYTVPVGSLT------DTEIYTEHSHQTTVAKTSPSGYYCASGDVH---GNVRIWD   86 (311)
T ss_dssp             CCCCEECTTSSEEEEEET--T--EEEEEETTCSS------CCEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEE
T ss_pred             eEEEEEcCCCCEEEEEeC--C--EEEEEECCCCc------eeEEEcCCCCCEEEEEEeCCCCeEeccccC---ceEeeee
Confidence            356889999999999752  2  25555554332      111122233345566788887755433322   2456677


Q ss_pred             CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463           90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF  169 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~  169 (790)
                      ..++.+............+   ....|+|||+.|+..+....           +.+.+++++.++     ....+.....
T Consensus        87 ~~~~~~~~~~~~~~~~~~v---~~v~~s~d~~~l~~~~~~~~-----------~~~~v~~~~~~~-----~~~~l~~h~~  147 (311)
T d1nr0a1          87 TTQTTHILKTTIPVFSGPV---KDISWDSESKRIAAVGEGRE-----------RFGHVFLFDTGT-----SNGNLTGQAR  147 (311)
T ss_dssp             SSSTTCCEEEEEECSSSCE---EEEEECTTSCEEEEEECCSS-----------CSEEEEETTTCC-----BCBCCCCCSS
T ss_pred             eeccccccccccccccCcc---cccccccccccccccccccc-----------cccccccccccc-----cccccccccc
Confidence            7665443222221111111   34589999998876553221           134455666553     2233433333


Q ss_pred             EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEE
Q psy463          170 TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVL  249 (790)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~  249 (790)
                      .+.. ..|+++++.  .+++...          ...|.++|+.+++.     ...+.                 .....+
T Consensus       148 ~v~~-v~~~~~~~~--~l~sgs~----------d~~i~i~d~~~~~~-----~~~~~-----------------~~~~~i  192 (311)
T d1nr0a1         148 AMNS-VDFKPSRPF--RIISGSD----------DNTVAIFEGPPFKF-----KSTFG-----------------EHTKFV  192 (311)
T ss_dssp             CEEE-EEECSSSSC--EEEEEET----------TSCEEEEETTTBEE-----EEEEC-----------------CCSSCE
T ss_pred             cccc-cccccccee--eeccccc----------cccccccccccccc-----ccccc-----------------cccccc
Confidence            3333 356766552  3333211          14678888887652     11222                 345567


Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC--cccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR--GWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~--~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ..+.|+|||++++....+.   .+.+++..++.....+......  +.........|||||+.|+ +.+    .+|    
T Consensus       193 ~~v~~~p~~~~l~~~~~d~---~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~-tgs----~Dg----  260 (311)
T d1nr0a1         193 HSVRYNPDGSLFASTGGDG---TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SAS----ADK----  260 (311)
T ss_dssp             EEEEECTTSSEEEEEETTS---CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEE----TTS----
T ss_pred             cccccCccccccccccccc---cccccccccccccccccccccccccccccccccccCCCCCEEE-EEe----CCC----
Confidence            8999999999665554332   2888898887665444321100  0001134689999999887 555    456    


Q ss_pred             CcccEEEEEEcCCCC
Q psy463          328 DSWDHLTFIDLDDQA  342 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~  342 (790)
                          .|.++|+.+++
T Consensus       261 ----~v~iwd~~t~~  271 (311)
T d1nr0a1         261 ----TIKIWNVATLK  271 (311)
T ss_dssp             ----EEEEEETTTTE
T ss_pred             ----eEEEEECCCCc
Confidence                68899998876

>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase A
species: Bacillus subtilis [TaxId: 1423]

Probab=99.17  E-value=5.3e-11  Score=108.92  Aligned_cols=170  Identities=11%  Similarity=-0.057  Sum_probs=110.3

Q ss_pred             cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463          502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI  581 (790)
Q Consensus       502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~  581 (790)
                      | ||++||..+..   ..|.  .....++++||.++.++.+|.+.......         ...+++.+.++.+.++.   
T Consensus         4 P-Vv~vHG~~~~~---~~~~--~l~~~l~~~g~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~i~~~~~~~---   65 (179)
T d1ispa_           4 P-VVMVHGIGGAS---FNFA--GIKSYLVSQGWSRDKLYAVDFWDKTGTNY---------NNGPVLSRFVQKVLDET---   65 (179)
T ss_dssp             C-EEEECCTTCCG---GGGH--HHHHHHHHTTCCGGGEEECCCSCTTCCHH---------HHHHHHHHHHHHHHHHH---
T ss_pred             C-EEEECCCCCCH---HHHH--HHHHHHHHcCCeEEEEecCCccccccccc---------hhhhhHHHHHHHHHHhc---
Confidence            5 46789988763   2332  33445556899998888887654332211         22455666666666533   


Q ss_pred             CCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463          582 DKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD  660 (790)
Q Consensus       582 d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  660 (790)
                      ..+++.|+||||||.++..++.+++ .++++.+|.+++.....             +  .               ..+  
T Consensus        66 ~~~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~-------------~--~---------------~~l--  113 (179)
T d1ispa_          66 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLT-------------T--G---------------KAL--  113 (179)
T ss_dssp             CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGT-------------C--S---------------BCC--
T ss_pred             CCceEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCc-------------h--h---------------hhc--
Confidence            3578999999999999999887764 24688888777642110             0  0               000  


Q ss_pred             CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccc
Q psy463          661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH  740 (790)
Q Consensus       661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~  740 (790)
                                                     .                         ...... .+|++.++|..|.+|+
T Consensus       114 -------------------------------~-------------------------~~~~~~-~~~~~~i~~~~D~~v~  136 (179)
T d1ispa_         114 -------------------------------P-------------------------GTDPNQ-KILYTSIYSSADMIVM  136 (179)
T ss_dssp             -------------------------------C-------------------------CSCTTC-CCEEEEEEETTCSSSC
T ss_pred             -------------------------------C-------------------------Cccccc-CceEEEEEecCCcccC
Confidence                                           0                         000112 6899999999999999


Q ss_pred             hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHH
Q psy463          741 FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDS  787 (790)
Q Consensus       741 ~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~  787 (790)
                      +..+.     +.    ..+.+.+++.+|.......++.+.+.+||+.
T Consensus       137 ~~~~~-----l~----~~~~~~~~~~~H~~l~~~~~v~~~i~~~L~~  174 (179)
T d1ispa_         137 NYLSR-----LD----GARNVQIHGVGHIGLLYSSQVNSLIKEGLNG  174 (179)
T ss_dssp             HHHHC-----CB----TSEEEEESSCCTGGGGGCHHHHHHHHHHHTT
T ss_pred             chhhc-----CC----CceEEEECCCCchhhccCHHHHHHHHHHHhc
Confidence            76532     22    2366788999997655556889999999874

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.16  E-value=1.4e-08  Score=106.97  Aligned_cols=364  Identities=8%  Similarity=-0.002  Sum_probs=187.5

Q ss_pred             cCCceeEeCCCCCceEEEEecC-CceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEE
Q psy463            8 SSSSALWFSPSGNNLAYASFDD-NRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARIT   86 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~   86 (790)
                      .....+.+++|.+.+.+++..+ +.+.+|  ....++      ....+... .....+.+++|++.+.-.++..   .+.
T Consensus        19 ~~p~~~~~~~d~~~~~~V~~~~dg~v~vw--D~~t~~------~~~~l~~g-~~~~~vafSPDGk~l~~~~~d~---~v~   86 (426)
T d1hzua2          19 DRPKKQLNDLDLPNLFSVTLRDAGQIALV--DGDSKK------IVKVIDTG-YAVHISRMSASGRYLLVIGRDA---RID   86 (426)
T ss_dssp             GSCSSCCSCCCGGGEEEEEETTTTEEEEE--ETTTCS------EEEEEECC-SSEEEEEECTTSCEEEEEETTS---EEE
T ss_pred             cCCCcccccCCCCeEEEEEEcCCCEEEEE--ECCCCc------EEEEEeCC-CCeeEEEECCCCCEEEEEeCCC---CEE
Confidence            3446678999999999888754 445554  443342      11111111 1234567889998775555443   577


Q ss_pred             EeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccc
Q psy463           87 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR  166 (790)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~  166 (790)
                      +++..++++..+.+.....+-....-.+.|||||++++.....+.            .+.+++..++.     ....+..
T Consensus        87 vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~------------~v~i~d~~~~~-----~~~~~~~  149 (426)
T d1hzua2          87 MIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP------------QFAIMDGETLE-----PKQIVST  149 (426)
T ss_dssp             EEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESS------------EEEEEETTTCC-----EEEEEEC
T ss_pred             EEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCC------------eEEEEcCCccc-----eeEEeec
Confidence            899988887765554332221111135799999999887654433            67777876663     1111111


Q ss_pred             cce----------EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehh
Q psy463          167 GRF----------TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL  236 (790)
Q Consensus       167 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~  236 (790)
                      ...          .........+++.  .++....          ....+..++...+..      ..++.     .   
T Consensus       150 ~~~~~~~~~~~~~~~~~~i~~s~d~~--~~~~~~~----------~~~~i~~~~~~~~~~------~~~~~-----~---  203 (426)
T d1hzua2         150 RGMTVDTQTYHPEPRVAAIIASHEHP--EFIVNVK----------ETGKVLLVNYKDIDN------LTVTS-----I---  203 (426)
T ss_dssp             CEECSSSCCEESCCCEEEEEECSSSS--EEEEEET----------TTTEEEEEECSSSSS------CEEEE-----E---
T ss_pred             cCCCccceeecCCCceeEEEECCCCC--EEEEecC----------CCCeEEEEEeccccc------eeeEE-----e---
Confidence            000          0001111122222  2222211          114555555544331      11110     0   


Q ss_pred             hcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463          237 AWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS  316 (790)
Q Consensus       237 ~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~  316 (790)
                             ........+.++|||++++......  ..+.+++..+++...........   .......+.+++...++...
T Consensus       204 -------~~~~~~~~~~~~~~g~~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  271 (426)
T d1hzua2         204 -------GAAPFLADGGWDSSHRYFMTAANNS--NKVAVIDSKDRRLSALVDVGKTP---HPGRGANFVHPKYGPVWSTS  271 (426)
T ss_dssp             -------ECCSSEEEEEECTTSCEEEEEETTC--SEEEEEETTTTEEEEEEECSSCC---CCSCCEEEEETTTEEEEEEE
T ss_pred             -------ccCCccEeeeECCCCcEEEeeeecc--cceeeeecccccEEEEeccCCcc---cccceeeeecCCCCceEEec
Confidence                   2234456789999999666665443  33778888888776665532211   11223445555544443333


Q ss_pred             cccccCCCCCcCcccEEEEEEcCCCCc-ccCC-CcccccCCCeEEeEEEeeecCCCEEEEEEcCCC--CceEEEEEEEcC
Q psy463          317 HNQESDGSTPVDSWDHLTFIDLDDQAG-IKDK-VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS--PIVQHMYRINIA  392 (790)
Q Consensus       317 ~~~~~~g~~~~~~~~~l~~~d~~~~~~-~~~~-~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~--~~~~~l~~~~~~  392 (790)
                          ..+      ...+.+++...... .... ....|......+.. ++++|||++|++......  .....|.+.+++
T Consensus       272 ----~~~------d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~-v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~  340 (426)
T d1hzua2         272 ----HLG------DGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLF-IKTHPKSSHLYVDTTFNPDARISQSVAVFDLK  340 (426)
T ss_dssp             ----CTT------TCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCC-EECCTTCSEEEECCTTCSSHHHHTCEEEEETT
T ss_pred             ----cCC------CceEEEeeccccccccccceEeEEEecCCCceeE-EEcCCCCceEEEeecCCCCcccCCEEEEEECC
Confidence                122      22455555433210 0000 01122222222232 789999999987543210  011346666776


Q ss_pred             CCCCC-cceeeec--ccccCCCcccEEEEEEecCCcEEEEEeecC-C-CCeEEEEecCCCeEEE
Q psy463          393 DPTAT-PECITCD--LLTSANQKCSYSGATFSTNVSYYVLSCIGP-G-IPEIMLFDKTGQRLLY  451 (790)
Q Consensus       393 ~~~~~-~~~lt~~--~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~-~-~~~i~~~~~~~~~~~~  451 (790)
                      +  ++ ...+...  ...+..+...+..+.|||||+++++++-+. + ...|.++|.++.++..
T Consensus       341 t--~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~  402 (426)
T d1hzua2         341 N--LDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKA  402 (426)
T ss_dssp             C--TTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEE
T ss_pred             C--CCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEE
Confidence            5  32 2222210  001112344567789999999998886433 2 6779999999876653

>d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: O-acetyltransferase
domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG
species: Acremonium chrysogenum [TaxId: 5044]

Probab=99.16  E-value=4.4e-10  Score=113.54  Aligned_cols=118  Identities=17%  Similarity=0.126  Sum_probs=78.5

Q ss_pred             CCccEEEEEcCCCCccccccccccch-HHHHHhcCCeEEEEEcCCCCCCChhhhHhh-----h----hccCCccchhHHH
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDW-NLYLADNKDIVVAYIDGRNSALKGNTLKYA-----G----YRRLGTVEIYDQI  568 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~-~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~-----~----~~~~~~~~~~D~~  568 (790)
                      .+-++||+.|+..++......|.... ....+.-..|.|+++|..|++.....-...     .    ...+....+.|.+
T Consensus        42 ~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D~v  121 (376)
T d2vata1          42 SRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDV  121 (376)
T ss_dssp             TSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHH
T ss_pred             CCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCcccccCCcchhHHHH
Confidence            45689999999888765444333211 112333467999999999876421110000     0    0123346788999


Q ss_pred             HHHHHHHHhCCCcCCCce-EEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          569 NVTRYLQENLPYIDKTRT-AIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       569 ~~~~~l~~~~~~~d~~ri-~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      .+-+.++++++   .+|+ +|+|+||||+.|+..+..+|+ .++.+|.+++-.
T Consensus       122 ~aq~~ll~~LG---I~~l~aViG~SmGGmqal~wa~~~Pd-~v~~li~Ia~~~  170 (376)
T d2vata1         122 RIHRQVLDRLG---VRQIAAVVGASMGGMHTLEWAFFGPE-YVRKIVPIATSC  170 (376)
T ss_dssp             HHHHHHHHHHT---CCCEEEEEEETHHHHHHHHHGGGCTT-TBCCEEEESCCS
T ss_pred             HHHHHHHHHhC---cceEEEeecccHHHHHHHHHHHhchH-HHhhhccccccc
Confidence            98888887655   4665 799999999999999999997 777666666543

>d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: O-acetyltransferase
domain: Homoserine O-acetyltransferase
species: Haemophilus influenzae [TaxId: 727]

Probab=99.16  E-value=1.7e-09  Score=108.36  Aligned_cols=285  Identities=12%  Similarity=0.060  Sum_probs=151.7

Q ss_pred             cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccc-cccchHH------HHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463          481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTER-FSVDWNL------YLADNKDIVVAYIDGRNSALKGNTLKY  553 (790)
Q Consensus       481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~-~~~~~~~------~~~~~~G~~v~~~d~rG~~~~g~~~~~  553 (790)
                      .+|.+..|--.+     ..+-++||+.|+..++...... -...|-.      ..+.-..|.|+++|..|++.....-..
T Consensus        24 ~~laY~t~G~ln-----~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s   98 (357)
T d2b61a1          24 INVAYQTYGTLN-----DEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSS   98 (357)
T ss_dssp             EEEEEEEESCCC-----TTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTS
T ss_pred             ceEEEEeecccC-----CCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCC
Confidence            456666664433     2345899999998776332110 0011111      223335699999999987642211111


Q ss_pred             hh-------hccCCccchhHHHHHHHHHHHhCCCcCCCce-EEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc
Q psy463          554 AG-------YRRLGTVEIYDQINVTRYLQENLPYIDKTRT-AIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY  625 (790)
Q Consensus       554 ~~-------~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri-~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~  625 (790)
                      ..       ...+....+.|.+++-..|+++++   ..|+ +|+|.||||+.|+..+.++|+ .++.++++++-......
T Consensus        99 ~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LG---I~~l~~viG~SmGGmqAl~wa~~~Pd-~v~~~i~i~~~a~~s~~  174 (357)
T d2b61a1          99 INPQTGKPYGSQFPNIVVQDIVKVQKALLEHLG---ISHLKAIIGGSFGGMQANQWAIDYPD-FMDNIVNLCSSIYFSAE  174 (357)
T ss_dssp             BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTT---CCCEEEEEEETHHHHHHHHHHHHSTT-SEEEEEEESCCSSCCHH
T ss_pred             CCCCCCCCCCcccccchhHHHHHHHHHHHHHhC---cceEEEEecccHHHHHHHHHHHhhhH-HHhhhcccccccccchh
Confidence            00       112334678899998888888666   4677 888999999999999999996 77777777664322211


Q ss_pred             cc----cchhhhcCCCCccCchhhhh-h------------------ccccchhhhccCCcEEEEeecCCCccChhhHHHH
Q psy463          626 DT----IYSERYMGLPTFEDNLEGYK-I------------------AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMML  682 (790)
Q Consensus       626 ~~----~~~~~~~g~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l  682 (790)
                      ..    ...+.+..-|. +. ...|. .                  .+.....+++.+..    ....+..-...+.+..
T Consensus       175 ~~~~~~~~~~aI~~Dp~-~~-~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~----~~~~~~~~~~~~vesy  248 (357)
T d2b61a1         175 AIGFNHVMRQAVINDPN-FN-GGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRAT----KSDGSFWGDYFQVESY  248 (357)
T ss_dssp             HHHHHHHHHHHHHTSTT-CG-GGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCB----CTTCCTTSCCBHHHHH
T ss_pred             HHHHHHHHHHHHHcCCC-CC-CCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhcccc----ccccccccchhhHHHH
Confidence            10    01111111110 00 00010 0                  00000111111000    0000000000001110


Q ss_pred             HHHHHhc-CcchhcccccCCCCcCCcchhhh-------hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhc
Q psy463          683 AKSLQHA-DIMFQSQRYMGLPTFEDNLEGYK-------IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA  754 (790)
Q Consensus       683 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~  754 (790)
                      .+.-... -..+....|..      ....+.       ..++...+++| ++|+|+|..+.|...|+++.+++++.|+..
T Consensus       249 L~~~g~kf~~rfDan~yl~------l~~a~~~~D~~~~~~~l~~aL~~I-~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~  321 (357)
T d2b61a1         249 LSYQGKKFLERFDANSYLH------LLRALDMYDPSLGYENVKEALSRI-KARYTLVSVTTDQLFKPIDLYKSKQLLEQS  321 (357)
T ss_dssp             HHHHHHHHHTTCCHHHHHH------HHHHHHHCCTTTTSSCHHHHHTTC-CSEEEEEEETTCSSSCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhCCHHHHHH------HHHHhhhcccccccccHHHHHhhc-CCCEEEEEeCCccccCHHHHHHHHHHHHhc
Confidence            0000000 00000000000      000000       11233457889 999999999999999999999999999999


Q ss_pred             CCceEEEEcCCC-CCcCCC-cchHHHHHHHHHHHH
Q psy463          755 DIMFQSQTYPDE-EHGLIG-VRPHFYHTLERFLDS  787 (790)
Q Consensus       755 g~~~~~~~~p~~-~H~~~~-~~~~~~~~i~~fl~~  787 (790)
                      ++++++++++.. ||.-.. +.+.+.+.|.+||..
T Consensus       322 ~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~  356 (357)
T d2b61a1         322 GVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG  356 (357)
T ss_dssp             TCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred             CCCeEEEEECCCCCccccCcCHHHHHHHHHHHHcc
Confidence            999999999864 775433 778888899999864

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.12  E-value=3.5e-08  Score=101.66  Aligned_cols=310  Identities=7%  Similarity=-0.060  Sum_probs=158.5

Q ss_pred             CceeEeCCCCCceEEEEe--cCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeeccc-------
Q psy463           10 SSALWFSPSGNNLAYASF--DDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQ-------   80 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~-------   80 (790)
                      ....++||||++|+.+..  .....++|++....++      .  ..++.-.....+.|++|++.+...+...       
T Consensus        23 ~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~------~--~~~~~~~~~~~~a~SpDG~~l~va~~~~~~~~~~~   94 (373)
T d2madh_          23 TNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGS------I--LGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGK   94 (373)
T ss_pred             ccccccCCCCCEEEEEcccccCCCceEEEEECCCCC------E--EEEEeCCCCccEEEcCCCCEEEEEeecCCcccccc
Confidence            456679999999977643  2344678888765553      1  1122222333568999998776554432       


Q ss_pred             ceeEEEEeeCCCCeeeEEEeecCCCCcc-cc-CCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccC
Q psy463           81 NRARITRCSINEGTCDVVFSRDLDRGWF-EP-FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD  158 (790)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~  158 (790)
                      ..-.+.+++..+++............+. .. .....|+|||+.+++.......           .+.+.+....+    
T Consensus        95 ~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~-----------~~~~~~~~~~~----  159 (373)
T d2madh_          95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP-----------AVGLVVQGGSS----  159 (373)
T ss_pred             cceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCC-----------ceEEeeccCCe----
Confidence            1234678888888776554443322221 11 1235899999998876643221           34455544432    


Q ss_pred             CcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhc
Q psy463          159 KVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW  238 (790)
Q Consensus       159 ~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~  238 (790)
                       .....     ....-..+.++++  ..|+....          ...+.+++.++++....... ...            
T Consensus       160 -~~~~~-----~~~~~~~~s~~g~--~~~v~~~~----------dg~~~~~~~~~~~~~~~~~~-~~~------------  208 (373)
T d2madh_         160 -DDQLL-----SSPTCYHIHPGAP--STFYLLCA----------QGGLAKTDHAGGAAGAGLVG-AML------------  208 (373)
T ss_pred             -EEEEe-----ccceeEEEecCCC--cEEEEEcC----------CCeEEEEEcCCceeeEEEee-ecc------------
Confidence             11111     1111223444444  23333321          14677777776543211000 000            


Q ss_pred             ccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC------ccc-ccCCceeEccCCCEE
Q psy463          239 DEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR------GWF-EPFDHLRFSSDGKKM  311 (790)
Q Consensus       239 ~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~------~~~-~~~~~~~~spDg~~i  311 (790)
                         ............++++++.++....+    .+++++..++....+.......      .|. .......++|||+.+
T Consensus       209 ---~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  281 (373)
T d2madh_         209 ---TAAQNLLTQPAQANKSGRIVWPVYSG----KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGI  281 (373)
T ss_pred             ---ccCccceeeeEEECCCceEEEecCCc----eEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeE
Confidence               00122333445566666654443222    2555555554433222211100      000 112357899999988


Q ss_pred             EEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463          312 LLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       312 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                      ++....   ............+.++|..+++     ....+..+. .... ++|+|||+.++|.+....   ..|+++++
T Consensus       282 ~~~~~~---~~~~~~~~~~~~v~~~d~~t~~-----~~~~~~~~~-~~~~-~a~spDG~~~l~vt~~~d---~~v~v~D~  348 (373)
T d2madh_         282 YLLTSE---QSAWKLHAAAKEVTSVTGLVGQ-----TSSQISLGH-DVDA-ISVAQDGGPDLYALSAGT---EVLHIYDA  348 (373)
T ss_pred             EEecCC---CceEEeecCCCeEEEEECCCCc-----EEEEecCCC-CeeE-EEECCCCCEEEEEEeCCC---CeEEEEEC
Confidence            744331   1000000013478889988876     233443332 2333 789999998877666544   57888898


Q ss_pred             CC
Q psy463          392 AD  393 (790)
Q Consensus       392 ~~  393 (790)
                      .+
T Consensus       349 ~t  350 (373)
T d2madh_         349 GA  350 (373)
T ss_pred             CC
Confidence            76

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.07  E-value=2.2e-08  Score=100.49  Aligned_cols=249  Identities=12%  Similarity=0.085  Sum_probs=145.0

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      .+++|+|+.|++..              -+.+.++++++..     ....++.+...+. -+.|.|+++  .+ ++..  
T Consensus        23 ~a~~~~g~~l~~~~--------------~~~v~i~~~~~~~-----~~~~~~~H~~~v~-~~~~sp~g~--~l-atg~--   77 (311)
T d1nr0a1          23 LGNTPAGDKIQYCN--------------GTSVYTVPVGSLT-----DTEIYTEHSHQTT-VAKTSPSGY--YC-ASGD--   77 (311)
T ss_dssp             CEECTTSSEEEEEE--------------TTEEEEEETTCSS-----CCEEECCCSSCEE-EEEECTTSS--EE-EEEE--
T ss_pred             EEEcCCCCEEEEEe--------------CCEEEEEECCCCc-----eeEEEcCCCCCEE-EEEEeCCCC--eE-eccc--
Confidence            57899999999865              1278889987763     2334444444443 346777654  33 3221  


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                              ....|.+.++.+++....   ..+.                 .....+..+.|+|||++++....+.. ..+
T Consensus        78 --------~dg~i~iwd~~~~~~~~~---~~~~-----------------~~~~~v~~v~~s~d~~~l~~~~~~~~-~~~  128 (311)
T d1nr0a1          78 --------VHGNVRIWDTTQTTHILK---TTIP-----------------VFSGPVKDISWDSESKRIAAVGEGRE-RFG  128 (311)
T ss_dssp             --------TTSEEEEEESSSTTCCEE---EEEE-----------------CSSSCEEEEEECTTSCEEEEEECCSS-CSE
T ss_pred             --------cCceEeeeeeeccccccc---cccc-----------------cccCcccccccccccccccccccccc-ccc
Confidence                    115777778877542110   1111                 33456788999999995555443221 126


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT  353 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt  353 (790)
                      .+.++++++........  .   .......|+|||+.++.+.+    .+|        .|.++|+.+++     ....+.
T Consensus       129 ~v~~~~~~~~~~~l~~h--~---~~v~~v~~~~~~~~~l~sgs----~d~--------~i~i~d~~~~~-----~~~~~~  186 (311)
T d1nr0a1         129 HVFLFDTGTSNGNLTGQ--A---RAMNSVDFKPSRPFRIISGS----DDN--------TVAIFEGPPFK-----FKSTFG  186 (311)
T ss_dssp             EEEETTTCCBCBCCCCC--S---SCEEEEEECSSSSCEEEEEE----TTS--------CEEEEETTTBE-----EEEEEC
T ss_pred             ccccccccccccccccc--c---cccccccccccceeeecccc----ccc--------ccccccccccc-----cccccc
Confidence            66777776653222111  1   11346789999997654554    455        58888988776     133344


Q ss_pred             CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          354 RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       354 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      .....+.. +.|+|+++.++..+.++     .+...++..  ++. ..+........+....+..+.|||++++++....
T Consensus       187 ~~~~~i~~-v~~~p~~~~l~~~~~d~-----~v~~~d~~~--~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~  258 (311)
T d1nr0a1         187 EHTKFVHS-VRYNPDGSLFASTGGDG-----TIVLYNGVD--GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA  258 (311)
T ss_dssp             CCSSCEEE-EEECTTSSEEEEEETTS-----CEEEEETTT--CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred             cccccccc-cccCccccccccccccc-----ccccccccc--ccccccccccccccccccccccccccCCCCCEEEEEeC
Confidence            44444554 78999999887776663     344445543  221 1111110011123456788999999998875432


Q ss_pred             cCCCCeEEEEecCCCeE
Q psy463          433 GPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       433 ~~~~~~i~~~~~~~~~~  449 (790)
                         -..|+++|+.+++.
T Consensus       259 ---Dg~v~iwd~~t~~~  272 (311)
T d1nr0a1         259 ---DKTIKIWNVATLKV  272 (311)
T ss_dssp             ---TSEEEEEETTTTEE
T ss_pred             ---CCeEEEEECCCCcE
Confidence               23688999877654

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.06  E-value=3.7e-08  Score=99.45  Aligned_cols=276  Identities=9%  Similarity=-0.044  Sum_probs=130.8

Q ss_pred             ecCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEE
Q psy463            7 LSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARIT   86 (790)
Q Consensus         7 ~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~   86 (790)
                      -+....++|||||++|+.+...++...+|.+...+.....+     ...........+.|++|++.+...+.......+.
T Consensus        36 ~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~-----~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~  110 (333)
T d1ri6a_          36 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA-----AESALPGSLTHISTDHQGQFVFVGSYNAGNVSVT  110 (333)
T ss_dssp             SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE-----EEEECSSCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEe-----eecccCCCceEEEEcCCCCEEeecccCCCceeee
Confidence            34567889999999997666556777888776655420000     0000011122356888888776665544333332


Q ss_pred             EeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccc
Q psy463           87 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR  166 (790)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~  166 (790)
                      ..+.  ..............+   .....++|||+.++.......            .|.+++...............+.
T Consensus       111 ~~~~--~~~~~~~~~~~~~~~---~~~v~~s~d~~~~~~~~~~~~------------~i~~~~~~~~~~~~~~~~~~~~~  173 (333)
T d1ri6a_         111 RLED--GLPVGVVDVVEGLDG---CHSANISPDNRTLWVPALKQD------------RICLFTVSDDGHLVAQDPAEVTT  173 (333)
T ss_dssp             EEET--TEEEEEEEEECCCTT---BCCCEECTTSSEEEEEEGGGT------------EEEEEEECTTSCEEEEEEEEEEC
T ss_pred             cccc--ccceecccccCCCcc---ceEEEeeecceeeeccccccc------------eeeEEEeccCCcceeeeceeeee
Confidence            2222  211111111111111   134578999998877664333            67777765432000000000000


Q ss_pred             cceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCC
Q psy463          167 GRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVE  246 (790)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~  246 (790)
                      ..........+++++.  .++.......        ...++.++.........   ..+.           ..+......
T Consensus       174 ~~g~~p~~i~~~~~~~--~~~~~~~~~~--------~~~v~~~~~~~~~~~~~---~~~~-----------~~~~~~~~~  229 (333)
T d1ri6a_         174 VEGAGPRHMVFHPNEQ--YAYCVNELNS--------SVDVWELKDPHGNIECV---QTLD-----------MMPENFSDT  229 (333)
T ss_dssp             STTCCEEEEEECTTSS--EEEEEETTTT--------EEEEEESSCTTSCCEEE---EEEE-----------CSCTTCCSC
T ss_pred             ecCCCccEEEEeccce--eEEeeccccC--------ceEEEeecccccceeee---eeee-----------eeecCCCcc
Confidence            0001112234444443  3333221100        01222222211110000   0000           000001223


Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      .......++|||++++......+...++..+..++..+....... ..+   ...++||||||+|+ ++.   ..++   
T Consensus       230 ~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---p~~~a~spDGk~l~-va~---~~~~---  298 (333)
T d1ri6a_         230 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT-ETQ---PRGFNVDHSGKYLI-AAG---QKSH---  298 (333)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC-SSS---CCCEEECTTSSEEE-EEC---TTTC---
T ss_pred             ccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCC-CCC---eeEEEEeCCCCEEE-EEE---CCCC---
Confidence            345678899999977777776666667777666554443333221 111   34689999999987 444   2333   


Q ss_pred             cCcccEEEEEEcCCCC
Q psy463          327 VDSWDHLTFIDLDDQA  342 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~  342 (790)
                         .-.||.+|.++|+
T Consensus       299 ---~v~v~~id~~tG~  311 (333)
T d1ri6a_         299 ---HISVYEIVGEQGL  311 (333)
T ss_dssp             ---EEEEEEEETTTTE
T ss_pred             ---eEEEEEEECCCCc
Confidence               3356667877775

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.04  E-value=6.6e-08  Score=98.70  Aligned_cols=302  Identities=10%  Similarity=0.071  Sum_probs=156.9

Q ss_pred             eEeCCCCCceEEEEecC--CceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecc-------ccee
Q psy463           13 LWFSPSGNNLAYASFDD--NRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRV-------QNRA   83 (790)
Q Consensus        13 ~~wSPDG~~iaf~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~-------~~~~   83 (790)
                      .+.||||++++++....  ....+|++....++      ..  .++.-.....+.|++|++.+...+..       ...-
T Consensus         7 ~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~------~~--~~~~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~   78 (355)
T d2bbkh_           7 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGR------VI--GMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTD   78 (355)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTE------EE--EEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred             EeeCCCCCEEEEEecccCCCcCeEEEEECCCCc------EE--EEEECCCCCceEEcCCCCEEEEEeCCCccccccCCCC
Confidence            35699999995443222  23468888887663      11  11112223346799999866554432       2344


Q ss_pred             EEEEeeCCCCeeeEEEeecCC-CCcccc-CCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcc
Q psy463           84 RITRCSINEGTCDVVFSRDLD-RGWFEP-FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  161 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~  161 (790)
                      .+.+++..+++.......... ..+... .....|+|||+++++.+....           ..+++++..+++     ..
T Consensus        79 ~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~-----------~~~~~~~~~~~~-----~~  142 (355)
T d2bbkh_          79 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA-----------PAVGVVDLEGKA-----FK  142 (355)
T ss_dssp             EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS-----------CEEEEEETTTTE-----EE
T ss_pred             EEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCC-----------ceeeeeecCCCc-----Ee
Confidence            678899988887665544322 222221 123589999999988664332           267778877663     22


Q ss_pred             eeccccceEEEE------EEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeeh
Q psy463          162 VPLTRGRFTVTE------ILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI  235 (790)
Q Consensus       162 ~~lt~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~  235 (790)
                      ..+.........      ...+.++++  .+++...          ....+..++......                   
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~dg~--~~~v~~~----------~~~~~~~~~~~~~~~-------------------  191 (355)
T d2bbkh_         143 RMLDVPDCYHIFPTAPDTFFMHCRDGS--LAKVAFG----------TEGTPEITHTEVFHP-------------------  191 (355)
T ss_dssp             EEEECCSEEEEEEEETTEEEEEETTSC--EEEEECC----------SSSCCEEEECCCCSC-------------------
T ss_pred             eEEecCCcceEeecCCcceEEEcCCCC--EEEEEec----------CCCeEEEEecccccc-------------------
Confidence            222221111110      011222222  1111110          001222233222110                   


Q ss_pred             hhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCc------cc-ccCCceeEccCC
Q psy463          236 LAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRG------WF-EPFDHLRFSSDG  308 (790)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~------~~-~~~~~~~~spDg  308 (790)
                              ........+.+++++..+.+...+.   .++++++.++....+........      +. .....+.++|||
T Consensus       192 --------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~  260 (355)
T d2bbkh_         192 --------EDEFLINHPAYSQKAGRLVWPTYTG---KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL  260 (355)
T ss_dssp             --------TTSCBCSCCEEETTTTEEEEEBTTS---EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred             --------eecceeeeccccCCCCeEEEecCCC---eEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCC
Confidence                    1111122346677777444443332   38888888887654433221111      00 112458899999


Q ss_pred             CEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463          309 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR  388 (790)
Q Consensus       309 ~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  388 (790)
                      +.+++....   ............|+++|+.+++     ....+..+. ... .++|+|||+.++|.+..+.   ..|++
T Consensus       261 ~~~~~~~~~---~~~~~~~~~~~~v~v~d~~t~~-----~~~~~~~~~-~~~-~~a~spDG~~~l~v~~~~d---~~i~v  327 (355)
T d2bbkh_         261 DRIYLLVDQ---RDEWRHKTASRFVVVLDAKTGE-----RLAKFEMGH-EID-SINVSQDEKPLLYALSTGD---KTLYI  327 (355)
T ss_dssp             TEEEEEEEE---CCTTCTTSCEEEEEEEETTTCC-----EEEEEEEEE-EEC-EEEECCSSSCEEEEEETTT---TEEEE
T ss_pred             CeEEEEecc---CCceeecCCCCeEEEEeCCCCc-----EEEEecCCC-CEE-EEEEcCCCCeEEEEEECCC---CEEEE
Confidence            998854431   1100000114579999998876     133343322 223 3789999998777665543   57888


Q ss_pred             EEcCC
Q psy463          389 INIAD  393 (790)
Q Consensus       389 ~~~~~  393 (790)
                      +++.+
T Consensus       328 ~D~~t  332 (355)
T d2bbkh_         328 HDAES  332 (355)
T ss_dssp             EETTT
T ss_pred             EECCC
Confidence            99876

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.04  E-value=8.2e-08  Score=100.95  Aligned_cols=216  Identities=8%  Similarity=-0.019  Sum_probs=118.6

Q ss_pred             ceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC
Q psy463           11 SALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI   90 (790)
Q Consensus        11 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~   90 (790)
                      .-+....|.+.+.+++..+. ..+.++....++      ....+... .....+.+++|++.+.-.++..   .+.+++.
T Consensus        22 ~~~~~~~~~~~~~~v~~~d~-g~v~v~D~~t~~------v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg---~v~~~d~   90 (432)
T d1qksa2          22 TQQMNDWDLENLFSVTLRDA-GQIALIDGSTYE------IKTVLDTG-YAVHISRLSASGRYLFVIGRDG---KVNMIDL   90 (432)
T ss_dssp             SSCCSCCCGGGEEEEEETTT-TEEEEEETTTCC------EEEEEECS-SCEEEEEECTTSCEEEEEETTS---EEEEEET
T ss_pred             CceeecCCCCcEEEEEEcCC-CEEEEEECCCCc------EEEEEeCC-CCeeEEEECCCCCEEEEEcCCC---CEEEEEe
Confidence            34456677777777766543 234555555453      11112211 2344567899999876556543   5778888


Q ss_pred             CCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceecccc---
Q psy463           91 NEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG---  167 (790)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~---  167 (790)
                      .+++...+.+.............|.|||||++|+.....+.            .+.++|.++++.     ...+...   
T Consensus        91 ~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~------------~v~i~d~~t~~~-----~~~~~~~~~~  153 (432)
T d1qksa2          91 WMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPP------------QYVIMDGETLEP-----KKIQSTRGMT  153 (432)
T ss_dssp             TSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETT------------EEEEEETTTCCE-----EEEEECCEEC
T ss_pred             eCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCC------------eEEEEeCccccc-----eeeeccCCcc
Confidence            88776655544432222222235789999999887665443            788899887741     1111100   


Q ss_pred             ----ce---EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhccc
Q psy463          168 ----RF---TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE  240 (790)
Q Consensus       168 ----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~  240 (790)
                          .+   .-..-..+++++.  .++++..          ....|++++..+++..++   ..+               
T Consensus       154 ~~~~~~~~~~~~~~v~~s~dg~--~~~vs~~----------~~~~i~~~d~~~~~~~~~---~~i---------------  203 (432)
T d1qksa2         154 YDEQEYHPEPRVAAILASHYRP--EFIVNVK----------ETGKILLVDYTDLNNLKT---TEI---------------  203 (432)
T ss_dssp             TTTCCEESCCCEEEEEECSSSS--EEEEEET----------TTTEEEEEETTCSSEEEE---EEE---------------
T ss_pred             ccceeccCCCceeEEEECCCCC--EEEEEEc----------cCCeEEEEEccCCCcceE---EEE---------------
Confidence                00   0000112233333  2333321          225788888776542111   111               


Q ss_pred             CCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEE
Q psy463          241 KENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSR  289 (790)
Q Consensus       241 ~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~  289 (790)
                         ........+.++|||++++......+  .+..++..+++.......
T Consensus       204 ---~~g~~~~~~~~spdg~~~~va~~~~~--~v~v~d~~~~~~~~~~~~  247 (432)
T d1qksa2         204 ---SAERFLHDGGLDGSHRYFITAANARN--KLVVIDTKEGKLVAIEDT  247 (432)
T ss_dssp             ---ECCSSEEEEEECTTSCEEEEEEGGGT--EEEEEETTTTEEEEEEEC
T ss_pred             ---cccCccccceECCCCCEEEEeccccc--eEEEeecccceEEEEecc
Confidence               12234567899999996666655433  388889888877655543

>d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases
domain: Surfactin synthetase, SrfA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.02  E-value=5.6e-10  Score=106.89  Aligned_cols=81  Identities=7%  Similarity=-0.047  Sum_probs=54.9

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHh
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN  577 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~  577 (790)
                      .++.++||++||..++.   ..|. .+ ...+  .+|.|+.+|++|.+.                .++++.+.++   +.
T Consensus        14 ~~~~~~l~~lhg~~g~~---~~~~-~l-a~~L--~~~~v~~~~~~g~~~----------------~a~~~~~~i~---~~   67 (230)
T d1jmkc_          14 QDQEQIIFAFPPVLGYG---LMYQ-NL-SSRL--PSYKLCAFDFIEEED----------------RLDRYADLIQ---KL   67 (230)
T ss_dssp             TTCSEEEEEECCTTCCG---GGGH-HH-HHHC--TTEEEEEECCCCSTT----------------HHHHHHHHHH---HH
T ss_pred             CCCCCeEEEEcCCCCCH---HHHH-HH-HHHC--CCCEEeccCcCCHHH----------------HHHHHHHHHH---Hh
Confidence            34558999999998873   2332 12 2334  379999999998532                2445444443   32


Q ss_pred             CCCcCCCceEEEEechHHHHHHHHHhcCCC
Q psy463          578 LPYIDKTRTAIWGWSYGGYATGLALALDPS  607 (790)
Q Consensus       578 ~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~  607 (790)
                      .+   ..++.|+||||||.+++.+|.+.|.
T Consensus        68 ~~---~~~~~lvGhS~GG~vA~~~A~~~~~   94 (230)
T d1jmkc_          68 QP---EGPLTLFGYSAGCSLAFEAAKKLEG   94 (230)
T ss_dssp             CC---SSCEEEEEETHHHHHHHHHHHHHHH
T ss_pred             CC---CCcEEEEeeccChHHHHHHHHhhhh
Confidence            22   4679999999999999998887653

>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PHB depolymerase-like
domain: Polyhydroxybutyrate depolymerase
species: Penicillium funiculosum [TaxId: 28572]

Probab=99.00  E-value=4.8e-10  Score=110.59  Aligned_cols=47  Identities=17%  Similarity=0.102  Sum_probs=42.7

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHHhcCC--ceEEEEcCCCCCcCC
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI--MFQSQTYPDEEHGLI  771 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~--~~~~~~~p~~~H~~~  771 (790)
                      ..|+||+||++|.+||+.++.+++++|++.+.  +++++..++++|.+.
T Consensus        90 ~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fp  138 (318)
T d2d81a1          90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFP  138 (318)
T ss_dssp             GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEE
T ss_pred             CCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCC
Confidence            78999999999999999999999999998744  688899999999874

>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Triacylglycerol lipase
species: Yeast (Candida antarctica), form b [TaxId: 34362]

Probab=99.00  E-value=1.6e-09  Score=106.53  Aligned_cols=105  Identities=19%  Similarity=0.266  Sum_probs=73.8

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      .+.| ||++||......  ..|...+. ..++++||.|+.+|++|.+.....           ...+++.+.++++.+..
T Consensus        30 ~~~P-VvlvHG~~~~~~--~~~~~~~~-~~L~~~Gy~v~~~d~~g~g~~d~~-----------~sae~la~~i~~v~~~~   94 (317)
T d1tcaa_          30 VSKP-ILLVPGTGTTGP--QSFDSNWI-PLSTQLGYTPCWISPPPFMLNDTQ-----------VNTEYMVNAITALYAGS   94 (317)
T ss_dssp             CSSE-EEEECCTTCCHH--HHHTTTHH-HHHHTTTCEEEEECCTTTTCSCHH-----------HHHHHHHHHHHHHHHHT
T ss_pred             CCCc-EEEECCCCCCCc--chhHHHHH-HHHHhCCCeEEEecCCCCCCCchH-----------hHHHHHHHHHHHHHHhc
Confidence            3456 567899776421  22222344 445558999999999986543221           23567788888888744


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEeCCCCC
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISVAPVTD  621 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~~~~~~  621 (790)
                      +   .+||.|+||||||.++.+++.++|.  ..++.+|.+++...
T Consensus        95 g---~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~  136 (317)
T d1tcaa_          95 G---NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK  136 (317)
T ss_dssp             T---SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred             c---CCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCC
Confidence            4   4789999999999999999998884  46888888887543

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=4.2e-08  Score=99.58  Aligned_cols=188  Identities=11%  Similarity=0.060  Sum_probs=109.8

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES  194 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (790)
                      .|+||+..++..+ .+            ..+.++++.+++     ...........+. -+.+++++.  .++...    
T Consensus       148 ~~~~~~~~l~s~~-~d------------~~i~~~~~~~~~-----~~~~~~~~~~~v~-~l~~s~~~~--~~~~~~----  202 (337)
T d1gxra_         148 AISPDSKVCFSCC-SD------------GNIAVWDLHNQT-----LVRQFQGHTDGAS-CIDISNDGT--KLWTGG----  202 (337)
T ss_dssp             EECTTSSEEEEEE-TT------------SCEEEEETTTTE-----EEEEECCCSSCEE-EEEECTTSS--EEEEEE----
T ss_pred             ccccccccccccc-cc------------cccccccccccc-----ccccccccccccc-ccccccccc--cccccc----
Confidence            5688888766433 21            267888877663     1121221122222 235555544  232221    


Q ss_pred             CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463          195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT  274 (790)
Q Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~  274 (790)
                             ....|.++|+.+++.      ....                 .....+..+.|+|+++.++....+.   .+.
T Consensus       203 -------~d~~v~i~d~~~~~~------~~~~-----------------~~~~~i~~l~~~~~~~~l~~~~~d~---~i~  249 (337)
T d1gxra_         203 -------LDNTVRSWDLREGRQ------LQQH-----------------DFTSQIFSLGYCPTGEWLAVGMESS---NVE  249 (337)
T ss_dssp             -------TTSEEEEEETTTTEE------EEEE-----------------ECSSCEEEEEECTTSSEEEEEETTS---CEE
T ss_pred             -------cccccccccccccee------eccc-----------------ccccceEEEEEcccccccceecccc---ccc
Confidence                   125778888877652      1111                 2344567899999999655443322   288


Q ss_pred             EEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC
Q psy463          275 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR  354 (790)
Q Consensus       275 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~  354 (790)
                      ++++.+++........   .   ......|+|||+.|+ +.+    .+|        .|.++|+.+++      ......
T Consensus       250 i~d~~~~~~~~~~~~~---~---~i~~v~~s~~g~~l~-s~s----~Dg--------~i~iwd~~~~~------~~~~~~  304 (337)
T d1gxra_         250 VLHVNKPDKYQLHLHE---S---CVLSLKFAYCGKWFV-STG----KDN--------LLNAWRTPYGA------SIFQSK  304 (337)
T ss_dssp             EEETTSSCEEEECCCS---S---CEEEEEECTTSSEEE-EEE----TTS--------EEEEEETTTCC------EEEEEE
T ss_pred             cccccccccccccccc---c---ccceEEECCCCCEEE-EEe----CCC--------eEEEEECCCCC------EEEEcc
Confidence            8898887654332211   1   234789999999877 555    456        68899998876      333333


Q ss_pred             CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463          355 GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       355 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~  389 (790)
                      +...+.. .+|+||++.|+..+.++.   ..||.+
T Consensus       305 ~~~~v~~-~~~s~d~~~l~t~s~D~~---I~vWdl  335 (337)
T d1gxra_         305 ESSSVLS-CDISVDDKYIVTGSGDKK---ATVYEV  335 (337)
T ss_dssp             CSSCEEE-EEECTTSCEEEEEETTSC---EEEEEE
T ss_pred             CCCCEEE-EEEeCCCCEEEEEeCCCe---EEEEEE
Confidence            3344554 789999998877666544   566654

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.93  E-value=1.1e-07  Score=99.92  Aligned_cols=323  Identities=10%  Similarity=0.014  Sum_probs=142.4

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS   89 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~   89 (790)
                      ..+++||||||+|+ ++.+++...+|.+..  ++...+ ........+......+.|++|++.+.-.+...  ..+.+++
T Consensus        64 ~~~vafSPDGk~l~-~~~~d~~v~vwd~~t--~~~~~~-~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~--~~v~i~d  137 (426)
T d1hzua2          64 VHISRMSASGRYLL-VIGRDARIDMIDLWA--KEPTKV-AEIKIGIEARSVESSKFKGYEDRYTIAGAYWP--PQFAIMD  137 (426)
T ss_dssp             EEEEEECTTSCEEE-EEETTSEEEEEETTS--SSCEEE-EEEECCSEEEEEEECCSTTCTTTEEEEEEEES--SEEEEEE
T ss_pred             eeEEEECCCCCEEE-EEeCCCCEEEEEccC--CceeEE-EEEeCCCCCcceEEeeeecCCCCEEEEeecCC--CeEEEEc
Confidence            45688999999885 455566555555443  320000 00000011122234567888887654443332  3446678


Q ss_pred             CCCCeeeEEEeecCCCCccc---cC---CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCccee
Q psy463           90 INEGTCDVVFSRDLDRGWFE---PF---DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  163 (790)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~---~~---~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~  163 (790)
                      ..++.+..............   ..   .....++|++.+++.....            +.++.++..+...   .....
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~------------~~i~~~~~~~~~~---~~~~~  202 (426)
T d1hzua2         138 GETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET------------GKVLLVNYKDIDN---LTVTS  202 (426)
T ss_dssp             TTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT------------TEEEEEECSSSSS---CEEEE
T ss_pred             CCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCC------------CeEEEEEeccccc---eeeEE
Confidence            87777766554322211110   00   1236678888777655322            2677777655420   01122


Q ss_pred             ccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceee-hhhcccCC
Q psy463          164 LTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTE-ILAWDEKE  242 (790)
Q Consensus       164 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~-~~~~~~~~  242 (790)
                      +..+..  ..-..++++++  .++.....          ...+.+++..+++....     +..+...... ...+.   
T Consensus       203 ~~~~~~--~~~~~~~~~g~--~~~~a~~~----------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---  260 (426)
T d1hzua2         203 IGAAPF--LADGGWDSSHR--YFMTAANN----------SNKVAVIDSKDRRLSAL-----VDVGKTPHPGRGANFV---  260 (426)
T ss_dssp             EECCSS--EEEEEECTTSC--EEEEEETT----------CSEEEEEETTTTEEEEE-----EECSSCCCCSCCEEEE---
T ss_pred             eccCCc--cEeeeECCCCc--EEEeeeec----------ccceeeeecccccEEEE-----eccCCcccccceeeee---
Confidence            222221  12235666655  44444321          14566666666543211     0000000000 00000   


Q ss_pred             CCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          243 NNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       243 ~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      ............++|+.+..+.......      ....+++.  ....+...   ......|||||+.|++..+.  ..+
T Consensus       261 ~~~~~~~~~~~~~~d~~v~~~~~~~~~~------~~~~~~~~--~~l~g~~~---~v~~v~~sPdg~~l~v~~~~--~~s  327 (426)
T d1hzua2         261 HPKYGPVWSTSHLGDGSISLIGTDPKNH------PQYAWKKV--AELQGQGG---GSLFIKTHPKSSHLYVDTTF--NPD  327 (426)
T ss_dssp             ETTTEEEEEEECTTTCEEEEEECCTTTC------TTTBTSEE--EEEECSSS---CCCCEECCTTCSEEEECCTT--CSS
T ss_pred             cCCCCceEEeccCCCceEEEeecccccc------ccccceEe--EEEecCCC---ceeEEEcCCCCceEEEeecC--CCC
Confidence            0111112222222333322221111100      00111222  11111111   13468999999999843220  011


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCC----CcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDK----VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~----~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      +.    ....|.++|+++++.....    ....+..+...+.. ++|||||++|++...........|.+.+.++
T Consensus       328 ~~----~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~-~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T  397 (426)
T d1hzua2         328 AR----ISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQ-PEYNKRGDEVWFSVWNGKNDSSALVVVDDKT  397 (426)
T ss_dssp             HH----HHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEE-EEECSSSSEEEEEECCCTTSCCEEEEEETTT
T ss_pred             cc----cCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEE-EEECCCCCEEEEEEecCCCCCCeEEEEECCC
Confidence            10    0235899999877511000    00112233333444 7899999999887533111225677788776

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.92  E-value=6.2e-08  Score=99.72  Aligned_cols=305  Identities=7%  Similarity=-0.052  Sum_probs=159.6

Q ss_pred             eeEeCCCCCc--eEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeec-------ccce
Q psy463           12 ALWFSPSGNN--LAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNR-------VQNR   82 (790)
Q Consensus        12 ~~~wSPDG~~--iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r-------~~~~   82 (790)
                      ...-+|||+.  |++.....+...+|++...+++      ....+.  ......+.|++|++.+...+.       +...
T Consensus        24 ~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~------~~~~~~--~~~~~~~a~spDg~~i~~~~~~~~~~~~g~~d   95 (368)
T d1mdah_          24 DHGPGAISRRSHITLPAYFAGTTENWVSCAGCGV------TLGHSL--GAFLSLAVAGHSGSDFALASTSFARSAKGKRT   95 (368)
T ss_dssp             CCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTE------EEEEEE--ECTTCEEEECTTSSCEEEEEEEETTTTSSSEE
T ss_pred             ccccCCCCcceeEEeeccCCCcceEEEEeCCCCc------EEEEEe--CCCCCcceECCCCCEEEEEcccCccccccccC
Confidence            3445788886  5555666778889999887774      111111  122334678899886644332       2445


Q ss_pred             eEEEEeeCCCCeeeEEEeecCCCCc-cc-cCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCc
Q psy463           83 ARITRCSINEGTCDVVFSRDLDRGW-FE-PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV  160 (790)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~  160 (790)
                      -.+.++|..++++......+..... .. ......|||||++|++.+...+            .++++|+.+++     .
T Consensus        96 ~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~------------~v~~~d~~~~~-----~  158 (368)
T d1mdah_          96 DYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS------------AAAGLSVPGAS-----D  158 (368)
T ss_dssp             EEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS------------CEEEEEETTTE-----E
T ss_pred             CeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCC------------eEEEEECCCCc-----E
Confidence            6688999988887665544322211 11 1234689999999998664332            78999988774     2


Q ss_pred             ceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhccc
Q psy463          161 PVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE  240 (790)
Q Consensus       161 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~  240 (790)
                      ...+......     .+.+.+.  ..++....  |        ..+..+++..+............              
T Consensus       159 ~~~~~~~~~~-----~~~~~~~--~~~v~~~~--D--------g~~~~~~~~~~~~~~~~~~~~~~--------------  207 (368)
T d1mdah_         159 DQLTKSASCF-----HIHPGAA--ATHYLGSC--P--------ASLAASDLAAAPAAAGIVGAQCT--------------  207 (368)
T ss_dssp             EEEEECSSCC-----CCEEEET--TEEECCCC--T--------TSCEEEECCSSCCCCEECCCCSC--------------
T ss_pred             eEEeeccCcc-----eEccCCC--ceEEEEcC--C--------CCEEEEEecCCceeeeeeecccc--------------
Confidence            2222111000     0111111  12222211  1        23444444432211000000000              


Q ss_pred             CCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCc------cc-ccCCceeEccCCCEEEE
Q psy463          241 KENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRG------WF-EPFDHLRFSSDGKKMLL  313 (790)
Q Consensus       241 ~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~------~~-~~~~~~~~spDg~~i~~  313 (790)
                        .........+.++++|..+.....     +++.++...+....+........      |. .......++||++.+++
T Consensus       208 --~~~~~~~~~~~~~~~g~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v  280 (368)
T d1mdah_         208 --GAQNCSSQAAQANYPGMLVWAVAS-----SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI  280 (368)
T ss_dssp             --TTSCBCSCCEEETTTTEEEECBSS-----CCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred             --cccccceeecccccCcEEEEecCC-----CEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEE
Confidence              011222334667778775443322     27777777665554432211110      11 11245789999998875


Q ss_pred             EEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          314 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      ...   +... .......+|+++|+.+++     ....+..+ ..... ++|+|||+.++|.+..+.   ..|++++..+
T Consensus       281 ~~~---~~~~-~~~~~~~~v~v~D~~t~~-----~~~~~~~~-~~~~~-~a~spDG~~~ly~s~~~~---~~v~v~D~~t  346 (368)
T d1mdah_         281 LTV---EHSR-SCLAAAENTSSVTASVGQ-----TSGPISNG-HDSDA-IIAAQDGASDNYANSAGT---EVLDIYDAAS  346 (368)
T ss_dssp             EEE---ECSS-CTTSCEEEEEEEESSSCC-----EEECCEEE-EEECE-EEECCSSSCEEEEEETTT---TEEEEEESSS
T ss_pred             Eec---CCCc-eeecCCceEEEEECCCCc-----EeEEecCC-CceeE-EEECCCCCEEEEEEeCCC---CeEEEEECCC
Confidence            443   1111 000113579999998886     13334332 22233 789999997766665543   4788899876

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.90  E-value=2.4e-07  Score=95.57  Aligned_cols=294  Identities=11%  Similarity=0.037  Sum_probs=145.1

Q ss_pred             cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCC-------cCCCc-----cccCCCCccccccCCCcceeEee
Q psy463            8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPS-------SQYTQ-----AINLREPVLSRVNWANESVVAAW   75 (790)
Q Consensus         8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~-----~~~~~~~~~~~~~w~~~~~~~~~   75 (790)
                      +...+++|||||++||..+  ++...+|.+..  +.....       ...+.     ....+...+..+.|++++..+.-
T Consensus        63 ~~V~~l~fs~dg~~lasg~--d~~i~iW~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s  138 (388)
T d1erja_          63 SVVCCVKFSNDGEYLATGC--NKTTQVYRVSD--GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  138 (388)
T ss_dssp             SCCCEEEECTTSSEEEEEC--BSCEEEEETTT--CCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CcEEEEEECCCCCEEEEEe--CCeEEEEEecc--cceEeeecccccccccccccccccccCCCCCEEEEEECCCCCccee
Confidence            5568899999999998643  56677775532  210000       00000     00111222334567666654433


Q ss_pred             eecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCC
Q psy463           76 VNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG  155 (790)
Q Consensus        76 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~  155 (790)
                      ....   -.+.+++..++++..........     .....|++++..++..+.             .+.+.+++..+.. 
T Consensus       139 ~~~d---g~v~i~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~~~~~~-------------~~~i~~~d~~~~~-  196 (388)
T d1erja_         139 GAED---RLIRIWDIENRKIVMILQGHEQD-----IYSLDYFPSGDKLVSGSG-------------DRTVRIWDLRTGQ-  196 (388)
T ss_dssp             EETT---SCEEEEETTTTEEEEEECCCSSC-----EEEEEECTTSSEEEEEET-------------TSEEEEEETTTTE-
T ss_pred             cccc---ccccccccccccccccccccccc-----cccccccccccccccccc-------------ceeeeeeeccccc-
Confidence            2222   23556666666554433322111     123578899988775442             2267777776552 


Q ss_pred             ccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCc-CC-cccccccccee
Q psy463          156 IKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK-VP-VPLTRGRFTVT  233 (790)
Q Consensus       156 ~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~-~~lt~~~~~~~  233 (790)
                          ...... ........ .+.+..+. ++....           ....|+++++.++...... .. ...+       
T Consensus       197 ----~~~~~~-~~~~~~~~-~~~~~~~~-~l~~~~-----------~d~~i~i~~~~~~~~~~~~~~~~~~~~-------  251 (388)
T d1erja_         197 ----CSLTLS-IEDGVTTV-AVSPGDGK-YIAAGS-----------LDRAVRVWDSETGFLVERLDSENESGT-------  251 (388)
T ss_dssp             ----EEEEEE-CSSCEEEE-EECSTTCC-EEEEEE-----------TTSCEEEEETTTCCEEEEEC------C-------
T ss_pred             ----cccccc-cccccccc-cccCCCCC-eEEEEc-----------CCCeEEEeecccCccceeecccccccc-------
Confidence                111111 11112222 22232222 222211           1146777787765421110 00 0001       


Q ss_pred             ehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEE----------EeCCCcccccCCcee
Q psy463          234 EILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFS----------RDLDRGWFEPFDHLR  303 (790)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~----------~~~~~~~~~~~~~~~  303 (790)
                                .....+..+.|+|||+.++....+.   .|.++++.++.......          .....   .......
T Consensus       252 ----------~h~~~v~~l~~s~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~  315 (388)
T d1erja_         252 ----------GHKDSVYSVVFTRDGQSVVSGSLDR---SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK---DFVLSVA  315 (388)
T ss_dssp             ----------CCSSCEEEEEECTTSSEEEEEETTS---EEEEEEC---------------CEEEEEECCS---SCEEEEE
T ss_pred             ----------CCCCCEEEEEECCCCCEEEEEECCC---cEEEEeccCCccccccccccccceeeeccccc---ceEEEEE
Confidence                      3345678999999999665544432   37777776654321111          11001   1134688


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEE-----EeeecCCCEEEEEEcC
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI-----LAWDEKENNVYFLSTQ  378 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~-----~~~s~dg~~l~~~~~~  378 (790)
                      |+|||+.|+ +.+    .+|        .|.++|+.+++     ....+..+...+...     ..|+||++.|+-.+.+
T Consensus       316 ~s~~~~~l~-sg~----~dg--------~i~vwd~~~~~-----~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~D  377 (388)
T d1erja_         316 TTQNDEYIL-SGS----KDR--------GVLFWDKKSGN-----PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGD  377 (388)
T ss_dssp             ECGGGCEEE-EEE----TTS--------EEEEEETTTCC-----EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETT
T ss_pred             ECCCCCEEE-EEe----CCC--------EEEEEECCCCc-----EEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCC
Confidence            999999877 555    456        68999998876     234454444333321     3578898877665555


Q ss_pred             CCCceEEEEEE
Q psy463          379 GSPIVQHMYRI  389 (790)
Q Consensus       379 ~~~~~~~l~~~  389 (790)
                      +.   ..||.+
T Consensus       378 g~---I~iW~~  385 (388)
T d1erja_         378 CK---ARIWKY  385 (388)
T ss_dssp             SE---EEEEEE
T ss_pred             CE---EEEEee
Confidence            43   566655

>d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases
domain: Picromycin polyketide synthase
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.87  E-value=1.8e-09  Score=106.49  Aligned_cols=62  Identities=16%  Similarity=0.146  Sum_probs=46.8

Q ss_pred             hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCC-C-cchHHHHHHHHHHHH
Q psy463          721 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLI-G-VRPHFYHTLERFLDS  787 (790)
Q Consensus       721 ~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~-~-~~~~~~~~i~~fl~~  787 (790)
                      ..+ ++|+|+++|++|..++......+.+.+   ...++++.+|| +|... . +.+.+.+.|.+||+.
T Consensus       218 ~~~-~~Pvl~i~g~~d~~~~~~~~~~w~~~~---~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~L~~  281 (283)
T d2h7xa1         218 GRS-SAPVLLVRASEPLGDWQEERGDWRAHW---DLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDA  281 (283)
T ss_dssp             CCC-CSCEEEEEESSCSSCCCGGGCCCSCCC---SSCSEEEEESS-CTTHHHHTTHHHHHHHHHHHHHH
T ss_pred             ccc-CCCeEEEEeCCCCCCCHHHHHHHHHhC---CCCcEEEEEcC-CCcccccCCHHHHHHHHHHHHHh
Confidence            456 899999999999998877765443322   23468889998 78643 3 678888999999975

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.86  E-value=8e-07  Score=87.88  Aligned_cols=118  Identities=11%  Similarity=0.074  Sum_probs=73.0

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ....++|+||+++++....+.   .|.++|+.+++...+..... ...   .....|+|||+.|+ +.+    .+|    
T Consensus       138 ~~~~~~~s~~~~~l~~g~~dg---~i~~~d~~~~~~~~~~~~~~-~~~---i~~~~~~~~~~~l~-~~~----~d~----  201 (299)
T d1nr0a2         138 NSSCVALSNDKQFVAVGGQDS---KVHVYKLSGASVSEVKTIVH-PAE---ITSVAFSNNGAFLV-ATD----QSR----  201 (299)
T ss_dssp             CEEEEEECTTSCEEEEEETTS---EEEEEEEETTEEEEEEEEEC-SSC---EEEEEECTTSSEEE-EEE----TTS----
T ss_pred             ccccccccccccccccccccc---cccccccccccccccccccc-ccc---cccccccccccccc-ccc----ccc----
Confidence            346789999999665544332   38888888877655443321 111   34688999999887 444    455    


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                          .|.++|+.++....  ....+..+...+.. ++|+|+++.|+..+.++     .|+..++..
T Consensus       202 ----~i~~~~~~~~~~~~--~~~~~~~h~~~v~~-l~~s~~~~~l~sgs~dg-----~i~iwd~~~  255 (299)
T d1nr0a2         202 ----KVIPYSVANNFELA--HTNSWTFHTAKVAC-VSWSPDNVRLATGSLDN-----SVIVWNMNK  255 (299)
T ss_dssp             ----CEEEEEGGGTTEES--CCCCCCCCSSCEEE-EEECTTSSEEEEEETTS-----CEEEEETTC
T ss_pred             ----cccccccccccccc--cccccccccccccc-ccccccccceEEEcCCC-----EEEEEECCC
Confidence                58889987654100  01223323334444 78999999887776663     355556654

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.85  E-value=1.7e-07  Score=98.47  Aligned_cols=190  Identities=7%  Similarity=-0.006  Sum_probs=118.1

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..|.++|+++++..     ..+.                 .+ .....+++|||||+++..+++.   .+.++|+.+++.
T Consensus        42 g~v~v~D~~t~~v~-----~~~~-----------------~g-~~~~~v~fSpDG~~l~~~s~dg---~v~~~d~~t~~~   95 (432)
T d1qksa2          42 GQIALIDGSTYEIK-----TVLD-----------------TG-YAVHISRLSASGRYLFVIGRDG---KVNMIDLWMKEP   95 (432)
T ss_dssp             TEEEEEETTTCCEE-----EEEE-----------------CS-SCEEEEEECTTSCEEEEEETTS---EEEEEETTSSSC
T ss_pred             CEEEEEECCCCcEE-----EEEe-----------------CC-CCeeEEEECCCCCEEEEEcCCC---CEEEEEeeCCCc
Confidence            58999999988742     2222                 22 3467899999999777777643   388999998876


Q ss_pred             eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC--------
Q psy463          284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG--------  355 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~--------  355 (790)
                      +.+.......+..+...++.|||||++|+...+    .++        .+.++|+++++      .......        
T Consensus        96 ~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~----~~~--------~v~i~d~~t~~------~~~~~~~~~~~~~~~  157 (432)
T d1qksa2          96 TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY----WPP--------QYVIMDGETLE------PKKIQSTRGMTYDEQ  157 (432)
T ss_dssp             CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE----ETT--------EEEEEETTTCC------EEEEEECCEECTTTC
T ss_pred             eEEEEEecCCCCCCeEEecccCCCCCEEEEEcC----CCC--------eEEEEeCcccc------ceeeeccCCccccce
Confidence            655443321222222346788999999875444    334        68899988876      3221111        


Q ss_pred             Ce---EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463          356 RF---TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI  432 (790)
Q Consensus       356 ~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~  432 (790)
                      .+   .....+..+|||+.+++.....    ..++.++...  .+...+...    . .......+.|+|||++++....
T Consensus       158 ~~~~~~~~~~v~~s~dg~~~~vs~~~~----~~i~~~d~~~--~~~~~~~~i----~-~g~~~~~~~~spdg~~~~va~~  226 (432)
T d1qksa2         158 EYHPEPRVAAILASHYRPEFIVNVKET----GKILLVDYTD--LNNLKTTEI----S-AERFLHDGGLDGSHRYFITAAN  226 (432)
T ss_dssp             CEESCCCEEEEEECSSSSEEEEEETTT----TEEEEEETTC--SSEEEEEEE----E-CCSSEEEEEECTTSCEEEEEEG
T ss_pred             eccCCCceeEEEECCCCCEEEEEEccC----CeEEEEEccC--CCcceEEEE----c-ccCccccceECCCCCEEEEecc
Confidence            11   0111256789999877776553    3677777755  332222210    0 1235667899999998877654


Q ss_pred             cCCCCeEEEEecCCCeEE
Q psy463          433 GPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       433 ~~~~~~i~~~~~~~~~~~  450 (790)
                      ..  ..+.+++.++++..
T Consensus       227 ~~--~~v~v~d~~~~~~~  242 (432)
T d1qksa2         227 AR--NKLVVIDTKEGKLV  242 (432)
T ss_dssp             GG--TEEEEEETTTTEEE
T ss_pred             cc--ceEEEeecccceEE
Confidence            43  36777888775543

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=1e-06  Score=87.15  Aligned_cols=146  Identities=10%  Similarity=0.119  Sum_probs=86.0

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCC---------------
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDG---------------  308 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg---------------  308 (790)
                      ........+.|+|||++++....+.   .+.+.+..++.........  ..   ......|+|++               
T Consensus       141 ~~~~~~~~~~~~~~~~~l~~~~~d~---~v~~~~~~~~~~~~~~~~~--~~---~i~~~~~~~~~~~~~~~~~~~~~~~~  212 (317)
T d1vyhc1         141 GHREWVRMVRPNQDGTLIASCSNDQ---TVRVWVVATKECKAELREH--RH---VVECISWAPESSYSSISEATGSETKK  212 (317)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTCCEEEEECCC--SS---CEEEEEECCSCGGGGGGGCCSCC---
T ss_pred             cCCCcceeeecccCCCEEEEEeCCC---eEEEEeeccceeeEEEecC--CC---CceEEEEeeccccceeeccccceeee
Confidence            3445577899999999666554432   2788888777654333211  10   01133444443               


Q ss_pred             -----CEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          309 -----KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       309 -----~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                           ..++ ..+    .+|        .|.++++.+++     ....+......+.. +.|+|+++.|+..+.+     
T Consensus       213 ~~~~~~~~~-~~~----~d~--------~i~~~~~~~~~-----~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~d-----  268 (317)
T d1vyhc1         213 SGKPGPFLL-SGS----RDK--------TIKMWDVSTGM-----CLMTLVGHDNWVRG-VLFHSGGKFILSCADD-----  268 (317)
T ss_dssp             ----CCEEE-EEE----TTS--------EEEEEETTTTE-----EEEEEECCSSCEEE-EEECSSSSCEEEEETT-----
T ss_pred             eccCCceeE-ecc----CCC--------EEEEEECCCCc-----EEEEEeCCCCCEEE-EEECCCCCEEEEEECC-----
Confidence                 3232 333    344        68888887766     13334444444444 7899999977766655     


Q ss_pred             EEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463          384 QHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                      ..|...++.+  ++. ..+..       ....+..+.|+||+++|+..
T Consensus       269 g~i~iwd~~~--~~~~~~~~~-------h~~~V~~~~~s~~~~~l~s~  307 (317)
T d1vyhc1         269 KTLRVWDYKN--KRCMKTLNA-------HEHFVTSLDFHKTAPYVVTG  307 (317)
T ss_dssp             TEEEEECCTT--SCCCEEEEC-------CSSCEEEEEECSSSSCEEEE
T ss_pred             CeEEEEECCC--CcEEEEEcC-------CCCCEEEEEEcCCCCEEEEE
Confidence            3566667765  332 22322       45578889999999987653

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=98.81  E-value=1.2e-06  Score=88.04  Aligned_cols=179  Identities=7%  Similarity=-0.092  Sum_probs=83.2

Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeE--EEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDV--VFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~--l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      .+.+||||+.++........  +.+++........  ...... ...........|+++++.++....    ..+     
T Consensus       132 ~v~~s~d~~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~-~~~g~~p~~i~~~~~~~~~~~~~~----~~~-----  199 (333)
T d1ri6a_         132 SANISPDNRTLWVPALKQDR--ICLFTVSDDGHLVAQDPAEVT-TVEGAGPRHMVFHPNEQYAYCVNE----LNS-----  199 (333)
T ss_dssp             CCEECTTSSEEEEEEGGGTE--EEEEEECTTSCEEEEEEEEEE-CSTTCCEEEEEECTTSSEEEEEET----TTT-----
T ss_pred             EEEeeecceeeeccccccce--eeEEEeccCCcceeeeceeee-eecCCCccEEEEeccceeEEeecc----ccC-----
Confidence            45789999977766655443  5555544432211  111100 000011235789999998774332    223     


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccCC--CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTRG--RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL  406 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~  406 (790)
                       ...++.++..............+...  .........+++|++.++......+  ...+|.++..+  .. ..+.....
T Consensus       200 -~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~--~~~~~~~~~~~--~~-~~~~~~~~  273 (333)
T d1ri6a_         200 -SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTAS--LITVFSVSEDG--SV-LSKEGFQP  273 (333)
T ss_dssp             -EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTT--EEEEEEECTTS--CC-EEEEEEEE
T ss_pred             -ceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCC--eEEEEEEcCCC--CE-EEEEEEeC
Confidence             22233322222210000000011110  0011123678999998877765532  25666665544  22 22221000


Q ss_pred             ccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEE
Q psy463          407 TSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLY  451 (790)
Q Consensus       407 ~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~  451 (790)
                          .......++|||||++++.+....+.=.+|.+|.++++++.
T Consensus       274 ----~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l~~  314 (333)
T d1ri6a_         274 ----TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHE  314 (333)
T ss_dssp             ----CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEE
T ss_pred             ----CCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcEEE
Confidence                11223457899999998655322222234555767666554

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=98.79  E-value=9.8e-08  Score=96.67  Aligned_cols=256  Identities=12%  Similarity=0.040  Sum_probs=129.5

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccc--cceEE-EE--EEeeeccCCccEEEE
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR--GRFTV-TE--ILAWDERENNPLLIL  188 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~--~~~~~-~~--~~~~~~~~~~~~~~~  188 (790)
                      ..|||||++++.....++            .|.++|+.+++     ....+..  ..... ..  -..++++++  .+|+
T Consensus        45 l~~spDG~~l~v~~~~~~------------~v~~~d~~t~~-----~~~~~~~~~~~~~~~~~~~~v~~s~DG~--~l~v  105 (346)
T d1jmxb_          45 AMMAPDNRTAYVLNNHYG------------DIYGIDLDTCK-----NTFHANLSSVPGEVGRSMYSFAISPDGK--EVYA  105 (346)
T ss_dssp             EEECTTSSEEEEEETTTT------------EEEEEETTTTE-----EEEEEESCCSTTEEEECSSCEEECTTSS--EEEE
T ss_pred             EEECCCCCEEEEEECCCC------------cEEEEeCccCe-----eeeeecccccccccCCceEEEEEecCCC--EEEE
Confidence            478999998876553332            79999998874     1111111  11111 11  135666665  4444


Q ss_pred             ecccCC-CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEecc
Q psy463          189 SHNQES-DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRV  267 (790)
Q Consensus       189 ~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~  267 (790)
                      ...... ...........+..++..+++..+.   ....                 ..........+++|++++....  
T Consensus       106 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~--  163 (346)
T d1jmxb_         106 TVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP---VRTF-----------------PMPRQVYLMRAADDGSLYVAGP--  163 (346)
T ss_dssp             EEEEEEECSSCEEECCCEEEEEEGGGGGGBCC---SEEE-----------------ECCSSCCCEEECTTSCEEEESS--
T ss_pred             EecCCcceeeeeccCcceEEEEecccceeeeE---EEee-----------------eccCceEEEEecCCCEEEEeCC--
Confidence            432111 0111112345677777776653211   0000                 1122233456788888554432  


Q ss_pred             CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC-----------------CCcCcc
Q psy463          268 QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS-----------------TPVDSW  330 (790)
Q Consensus       268 ~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~-----------------~~~~~~  330 (790)
                          .+.++++.+++.......   ..+   .....++|+|+.++....    ..+.                 ......
T Consensus       164 ----~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (346)
T d1jmxb_         164 ----DIYKMDVKTGKYTVALPL---RNW---NRKGYSAPDVLYFWPHQS----PRHEFSMLYTIARFKDDKQDPATADLL  229 (346)
T ss_dssp             ----SEEEECTTTCCEEEEECS---TTC---CCTTBCCCBCCCCCCCCC----TTCEEEEEEEEEEC-------CCCEEE
T ss_pred             ----cceEEEccCCCEEEEEec---CCC---ccceEEeccccEEEEEec----CCCceEeeeeeeeeccCceeEeeccCC
Confidence                177788887766543321   111   235677888776542111    0000                 000012


Q ss_pred             cEEEEEEcCCCCcccCCCccc--ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccccc
Q psy463          331 DHLTFIDLDDQAGIKDKVPVP--LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTS  408 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~--lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~  408 (790)
                      ..+.++++.++.      ...  +..+...+.. ..+++++..+++....      .+..+++.+  ++......     
T Consensus       230 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~v~v~d~~~--~~~~~~~~-----  289 (346)
T d1jmxb_         230 YGYLSVDLKTGK------THTQEFADLTELYFT-GLRSPKDPNQIYGVLN------RLAKYDLKQ--RKLIKAAN-----  289 (346)
T ss_dssp             EEEEEEETTTCC------EEEEEEEECSSCEEE-EEECSSCTTEEEEEES------EEEEEETTT--TEEEEEEE-----
T ss_pred             ceEEEEECCCCc------eEEEEeecccceeEE-EEEeCCCCEEEEecCC------eEEEEECCC--CcEEEEEc-----
Confidence            245566665544      221  1122222222 5677888777665433      567778765  43222111     


Q ss_pred             CCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          409 ANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       409 ~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                        .......++|||||++++....   ...|.++|+++.+.
T Consensus       290 --~~~~~~~va~s~DG~~l~v~~~---d~~v~v~D~~t~~~  325 (346)
T d1jmxb_         290 --LDHTYYCVAFDKKGDKLYLGGT---FNDLAVFNPDTLEK  325 (346)
T ss_dssp             --CSSCCCEEEECSSSSCEEEESB---SSEEEEEETTTTEE
T ss_pred             --CCCCEEEEEEcCCCCEEEEEeC---CCcEEEEECccCCE
Confidence              1224567999999998876532   25799999987543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.77  E-value=1.8e-06  Score=87.57  Aligned_cols=302  Identities=9%  Similarity=0.007  Sum_probs=154.7

Q ss_pred             cCCCcceeEeeeec--ccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCC
Q psy463           65 NWANESVVAAWVNR--VQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  142 (790)
Q Consensus        65 ~w~~~~~~~~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~  142 (790)
                      ..++|++.++-...  .+....+.++|..+++.......    +.   .+.++|||||++|++.+.....   .+.|...
T Consensus         8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~----g~---~~~~a~SpDg~~l~v~~~~~~~---~~~g~~d   77 (355)
T d2bbkh_           8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG----GF---LPNPVVADDGSFIAHASTVFSR---IARGERT   77 (355)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE----CS---SCEEEECTTSSCEEEEEEEEEE---TTEEEEE
T ss_pred             eeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEEC----CC---CCceEEcCCCCEEEEEeCCCcc---ccccCCC
Confidence            34566665533322  23455678888888865443321    11   2357999999999887643221   1112223


Q ss_pred             cEEEEEEcCCcCCccCCcceeccccceE---E---EEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCccc
Q psy463          143 DHLTFIDLDDQAGIKDKVPVPLTRGRFT---V---TEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG  216 (790)
Q Consensus       143 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  216 (790)
                      ..|.++|+.+++     ....+..+...   +   .....++++++. +++....          ....++.++..+++.
T Consensus        78 ~~v~v~D~~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-~~v~~~~----------~~~~~~~~~~~~~~~  141 (355)
T d2bbkh_          78 DYVEVFDPVTLL-----PTADIELPDAPRFLVGTYPWMTSLTPDGKT-LLFYQFS----------PAPAVGVVDLEGKAF  141 (355)
T ss_dssp             EEEEEECTTTCC-----EEEEEEETTCCCCCBSCCGGGEEECTTSSE-EEEEECS----------SSCEEEEEETTTTEE
T ss_pred             CEEEEEECCCCC-----EEEEEecCCcceeecCCCCceEEEecCCCe-eEEecCC----------CCceeeeeecCCCcE
Confidence            479999988774     12222111000   0   011345665553 2222211          114566777776643


Q ss_pred             ccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCccc
Q psy463          217 IKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWF  296 (790)
Q Consensus       217 ~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~  296 (790)
                      ..     .+........          ........+.+++||+.+++.......  +...+..+....          ..
T Consensus       142 ~~-----~~~~~~~~~~----------~~~~~~~~~~~~~dg~~~~v~~~~~~~--~~~~~~~~~~~~----------~~  194 (355)
T d2bbkh_         142 KR-----MLDVPDCYHI----------FPTAPDTFFMHCRDGSLAKVAFGTEGT--PEITHTEVFHPE----------DE  194 (355)
T ss_dssp             EE-----EEECCSEEEE----------EEEETTEEEEEETTSCEEEEECCSSSC--CEEEECCCCSCT----------TS
T ss_pred             ee-----EEecCCcceE----------eecCCcceEEEcCCCCEEEEEecCCCe--EEEEecccccce----------ec
Confidence            11     1110000000          000112345778888855544333222  223333322111          00


Q ss_pred             ccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC----------CeEE--eEEEe
Q psy463          297 EPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG----------RFTV--TEILA  364 (790)
Q Consensus       297 ~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~----------~~~~--~~~~~  364 (790)
                      .....+.+++++..+++ .+    .++        .++++++.+++      ...+...          .+..  ...++
T Consensus       195 ~~~~~~~~~~~~~~~~~-~~----~~~--------~~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~~~~  255 (355)
T d2bbkh_         195 FLINHPAYSQKAGRLVW-PT----YTG--------KIHQIDLSSGD------AKFLPAVEALTEAERADGWRPGGWQQVA  255 (355)
T ss_dssp             CBCSCCEEETTTTEEEE-EB----TTS--------EEEEEECTTSS------CEECCCEESSCHHHHHTTEEECSSSCEE
T ss_pred             ceeeeccccCCCCeEEE-ec----CCC--------eEEEEecCCCc------EEEEeccCCcccceEeeeeeccceEEEE
Confidence            11335678888888874 33    334        68888887765      3222110          0100  12367


Q ss_pred             eecCCCEEEEEEcCC-----CCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCe
Q psy463          365 WDEKENNVYFLSTQG-----SPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPE  438 (790)
Q Consensus       365 ~s~dg~~l~~~~~~~-----~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~  438 (790)
                      +++|++.+|+....+     ......|+.++..+  ++. ..+..        ......+.|||||+.+++...+. ...
T Consensus       256 ~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t--~~~~~~~~~--------~~~~~~~a~spDG~~~l~v~~~~-d~~  324 (355)
T d2bbkh_         256 YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT--GERLAKFEM--------GHEIDSINVSQDEKPLLYALSTG-DKT  324 (355)
T ss_dssp             EETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT--CCEEEEEEE--------EEEECEEEECCSSSCEEEEEETT-TTE
T ss_pred             EeCCCCeEEEEeccCCceeecCCCCeEEEEeCCC--CcEEEEecC--------CCCEEEEEEcCCCCeEEEEEECC-CCE
Confidence            899999988876542     12346788899876  432 22322        23456789999999766655433 468


Q ss_pred             EEEEecCCCeE
Q psy463          439 IMLFDKTGQRL  449 (790)
Q Consensus       439 i~~~~~~~~~~  449 (790)
                      |+++|+++++.
T Consensus       325 i~v~D~~tg~~  335 (355)
T d2bbkh_         325 LYIHDAESGEE  335 (355)
T ss_dssp             EEEEETTTCCE
T ss_pred             EEEEECCCCCE
Confidence            99999987654

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.76  E-value=6.4e-07  Score=91.95  Aligned_cols=116  Identities=16%  Similarity=0.244  Sum_probs=66.3

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce----------------eEEEEEeCCCcccccCCceeEccCCCEE
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC----------------DVVFSRDLDRGWFEPFDHLRFSSDGKKM  311 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~----------------~~l~~~~~~~~~~~~~~~~~~spDg~~i  311 (790)
                      .+..+.|+|||++++....+..   +.+++...+..                ..+........+   ....+|||||+.|
T Consensus       143 ~v~~v~~~p~~~~l~s~s~D~~---v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~s~~g~~l  216 (371)
T d1k8kc_         143 TVLSLDWHPNSVLLAAGSCDFK---CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW---VHGVCFSANGSRV  216 (371)
T ss_dssp             CEEEEEECTTSSEEEEEETTSC---EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC---EEEEEECSSSSEE
T ss_pred             ccccccccccccceeccccCcE---EEEEeeccCccccccccccccccccceeeeeeccCccCc---EEEEEeecccccc
Confidence            3567889999996655443321   55555543321                122222221222   2367899999988


Q ss_pred             EEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463          312 LLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       312 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                      + +.+    .+|        .|.++|+..++     ....+......+.. +.|+||++.| ..+.++.   ..++..+.
T Consensus       217 ~-s~~----~d~--------~i~iwd~~~~~-----~~~~~~~~~~~v~s-~~fs~d~~~l-a~g~d~~---~~~~~~~~  273 (371)
T d1k8kc_         217 A-WVS----HDS--------TVCLADADKKM-----AVATLASETLPLLA-VTFITESSLV-AAGHDCF---PVLFTYDS  273 (371)
T ss_dssp             E-EEE----TTT--------EEEEEEGGGTT-----EEEEEECSSCCEEE-EEEEETTEEE-EEETTSS---CEEEEEET
T ss_pred             c-ccc----cCC--------cceEEeeeccc-----ceeeeeccccccee-eeecCCCCEE-EEEcCCc---eEEEEeeC
Confidence            7 555    355        68899987765     13334444444544 7899998744 3444433   45666654


Q ss_pred             C
Q psy463          392 A  392 (790)
Q Consensus       392 ~  392 (790)
                      .
T Consensus       274 ~  274 (371)
T d1k8kc_         274 A  274 (371)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.74  E-value=7e-06  Score=83.77  Aligned_cols=303  Identities=7%  Similarity=-0.028  Sum_probs=147.5

Q ss_pred             ccccCCCcceeEeeeecc--cceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCC
Q psy463           62 SRVNWANESVVAAWVNRV--QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  139 (790)
Q Consensus        62 ~~~~w~~~~~~~~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~  139 (790)
                      ....+++|++.+.-.+..  .....+.++|..+++....+.  .  +   ..+.+.|||||++|++.......   .+.+
T Consensus        24 ~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~--~--~---~~~~~a~SpDG~~l~va~~~~~~---~~~~   93 (373)
T d2madh_          24 NDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVN--G--G---FLPNPVAAHSGSEFALASTSFSR---IAKG   93 (373)
T ss_pred             cccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEe--C--C---CCccEEEcCCCCEEEEEeecCCc---cccc
Confidence            345677888765443333  233456777877776444322  1  1   12357999999999987643321   1122


Q ss_pred             cCCcEEEEEEcCCcCCccCCcceeccccceEEE------EEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCC
Q psy463          140 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT------EILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDD  213 (790)
Q Consensus       140 g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  213 (790)
                      ...+.|+++|+.+++     ....+..+.....      .-..+.++++...++...           ....+.+++..+
T Consensus        94 ~~~~~v~v~D~~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-----------~~~~~~~~~~~~  157 (373)
T d2madh_          94 KRTDYVEVFDPVTFL-----PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA-----------AGPAVGLVVQGG  157 (373)
T ss_pred             ccceEEEEEECCCCc-----EEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEc-----------CCCceEEeeccC
Confidence            223478999988874     2222222111110      112344444431111111           012333334333


Q ss_pred             cccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC
Q psy463          214 QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR  293 (790)
Q Consensus       214 ~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~  293 (790)
                      ++.        +                  ........+.++|||+.++.+....+  .+.+++..++............
T Consensus       158 ~~~--------~------------------~~~~~~~~~~~s~~g~~~~v~~~~dg--~~~~~~~~~~~~~~~~~~~~~~  209 (373)
T d2madh_         158 SSD--------D------------------QLLSSPTCYHIHPGAPSTFYLLCAQG--GLAKTDHAGGAAGAGLVGAMLT  209 (373)
T ss_pred             CeE--------E------------------EEeccceeEEEecCCCcEEEEEcCCC--eEEEEEcCCceeeEEEeeeccc
Confidence            221        0                  01112345779999994444433222  2778888877665443321100


Q ss_pred             c-ccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC-----C-------CeEEe
Q psy463          294 G-WFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR-----G-------RFTVT  360 (790)
Q Consensus       294 ~-~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~-----~-------~~~~~  360 (790)
                      . .........+++++..++  .+    .++        .+++++..+++      ...+..     .       .....
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~--~~----~~~--------~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  269 (373)
T d2madh_         210 AAQNLLTQPAQANKSGRIVW--PV----YSG--------KILQADISAAG------ATNKAPIDALSGGRKADTWRPGGW  269 (373)
T ss_pred             cCccceeeeEEECCCceEEE--ec----CCc--------eEEEEEcCCCe------EEEEEeeccccCcEEeeeeccCcc
Confidence            0 000011344555554332  22    122        34455544332      111000     0       00011


Q ss_pred             EEEeeecCCCEEEEEEcCCC-----CceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecC
Q psy463          361 EILAWDEKENNVYFLSTQGS-----PIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGP  434 (790)
Q Consensus       361 ~~~~~s~dg~~l~~~~~~~~-----~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~  434 (790)
                      ....+++|++.+++....+.     .....+..++..+  ++. ..+.        .......+.|||||+++++...+.
T Consensus       270 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t--~~~~~~~~--------~~~~~~~~a~spDG~~~l~vt~~~  339 (373)
T d2madh_         270 QQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV--GQTSSQIS--------LGHDVDAISVAQDGGPDLYALSAG  339 (373)
T ss_pred             eeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCC--CcEEEEec--------CCCCeeEEEECCCCCEEEEEEeCC
Confidence            23678999998877654421     1124677777765  332 2222        123566789999999876654333


Q ss_pred             CCCeEEEEecCCCeE
Q psy463          435 GIPEIMLFDKTGQRL  449 (790)
Q Consensus       435 ~~~~i~~~~~~~~~~  449 (790)
                       ...|+++|+.+++.
T Consensus       340 -d~~v~v~D~~tg~~  353 (373)
T d2madh_         340 -TEVLHIYDAGAGDQ  353 (373)
T ss_pred             -CCeEEEEECCCCCE
Confidence             35799999987554

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=98.72  E-value=6.9e-06  Score=80.67  Aligned_cols=225  Identities=13%  Similarity=0.129  Sum_probs=135.7

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|.++|+++++     +...+..+.. .. -.+++++++  .+|++...          ...|.++|+.+++..     .
T Consensus        13 ~v~v~D~~t~~-----~~~~i~~g~~-p~-~va~spdG~--~l~v~~~~----------~~~i~v~d~~t~~~~-----~   68 (301)
T d1l0qa2          13 NISVIDVTSNK-----VTATIPVGSN-PM-GAVISPDGT--KVYVANAH----------SNDVSIIDTATNNVI-----A   68 (301)
T ss_dssp             EEEEEETTTTE-----EEEEEECSSS-EE-EEEECTTSS--EEEEEEGG----------GTEEEEEETTTTEEE-----E
T ss_pred             EEEEEECCCCe-----EEEEEECCCC-ce-EEEEeCCCC--EEEEEECC----------CCEEEEEECCCCcee-----e
Confidence            69999998884     4444544432 22 246788776  45555421          258999999887531     1


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR  303 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  303 (790)
                      .+.                  .......+.|++||+.++......  ..+.+.+..+++..........      .....
T Consensus        69 ~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~  122 (301)
T d1l0qa2          69 TVP------------------AGSSPQGVAVSPDGKQVYVTNMAS--STLSVIDTTSNTVAGTVKTGKS------PLGLA  122 (301)
T ss_dssp             EEE------------------CSSSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEECSSS------EEEEE
T ss_pred             eee------------------cccccccccccccccccccccccc--ceeeecccccceeeeecccccc------ceEEE
Confidence            111                  122346789999999555544332  2377888888876555443211      23688


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      |+|||+.+++...    .++        .+.+++..+++     ....+.... ... .+.++||++.++.......   
T Consensus       123 ~~~dg~~~~~~~~----~~~--------~~~~~~~~~~~-----~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~---  180 (301)
T d1l0qa2         123 LSPDGKKLYVTNN----GDK--------TVSVINTVTKA-----VINTVSVGR-SPK-GIAVTPDGTKVYVANFDSM---  180 (301)
T ss_dssp             ECTTSSEEEEEET----TTT--------EEEEEETTTTE-----EEEEEECCS-SEE-EEEECTTSSEEEEEETTTT---
T ss_pred             eecCCCeeeeeec----ccc--------ceeeeeccccc-----eeeecccCC-Cce-EEEeeccccceeeeccccc---
Confidence            9999998875443    223        57788877665     122222221 222 3679999998887765532   


Q ss_pred             EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEE
Q psy463          384 QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLL  450 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~  450 (790)
                       .+.......  .+......       .........++++++.++....+.....|+++|+.+++..
T Consensus       181 -~~~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~  237 (301)
T d1l0qa2         181 -SISVIDTVT--NSVIDTVK-------VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT  237 (301)
T ss_dssp             -EEEEEETTT--TEEEEEEE-------CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred             -ccccccccc--eeeeeccc-------ccCCcceeeccccccccccccccceeeeeeeeecCCCeEE
Confidence             344444433  22222111       1234566889999999877766666778999998876543

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.70  E-value=2.4e-06  Score=87.56  Aligned_cols=253  Identities=11%  Similarity=0.079  Sum_probs=131.9

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ..+|||||+.|+..+. +            +.|.++++++++.   .....+..+...+.. +.|+|+++  .+ ++.. 
T Consensus        12 ~~~~s~dg~~la~~~~-~------------~~i~iw~~~~~~~---~~~~~l~gH~~~V~~-l~fsp~~~--~l-~s~s-   70 (371)
T d1k8kc_          12 CHAWNKDRTQIAICPN-N------------HEVHIYEKSGNKW---VQVHELKEHNGQVTG-VDWAPDSN--RI-VTCG-   70 (371)
T ss_dssp             EEEECTTSSEEEEECS-S------------SEEEEEEEETTEE---EEEEEEECCSSCEEE-EEEETTTT--EE-EEEE-
T ss_pred             EEEECCCCCEEEEEeC-C------------CEEEEEECCCCCE---EEEEEecCCCCCEEE-EEECCCCC--EE-EEEE-
Confidence            3489999998886432 1            2677778766531   012223333334433 46777665  22 2221 


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR  272 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~  272 (790)
                       .        ...|.+.++.+++.+..   ..+.                 .....+..+.|+|||+.++....+. .  
T Consensus        71 -~--------D~~i~vWd~~~~~~~~~---~~~~-----------------~~~~~v~~i~~~p~~~~l~~~s~d~-~--  118 (371)
T d1k8kc_          71 -T--------DRNAYVWTLKGRTWKPT---LVIL-----------------RINRAARCVRWAPNEKKFAVGSGSR-V--  118 (371)
T ss_dssp             -T--------TSCEEEEEEETTEEEEE---EECC-----------------CCSSCEEEEEECTTSSEEEEEETTS-S--
T ss_pred             -C--------CCeEEEEeecccccccc---cccc-----------------cccccccccccccccccceeecccC-c--
Confidence             1        14566667765542111   0111                 3345578899999999665554432 2  


Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCC----
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV----  348 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~----  348 (790)
                      +.+++.+............ ...........|+|||+.|+ +.+    .+|        .+.+++...+.......    
T Consensus       119 i~i~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~p~~~~l~-s~s----~D~--------~v~v~~~~~~~~~~~~~~~~~  184 (371)
T d1k8kc_         119 ISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVLLA-AGS----CDF--------KCRIFSAYIKEVEERPAPTPW  184 (371)
T ss_dssp             EEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSEEE-EEE----TTS--------CEEEEECCCTTTSCCCCCBTT
T ss_pred             ceeeeeecccccccccccc-ccccccccccccccccccee-ccc----cCc--------EEEEEeeccCccccccccccc
Confidence            4444443333222222111 11111134688999999887 555    455        46666664432100000    


Q ss_pred             ---------cccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecccccCCCcccEEEE
Q psy463          349 ---------PVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDLLTSANQKCSYSGA  418 (790)
Q Consensus       349 ---------~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~  418 (790)
                               ..........+.. ++|+|||+.|+..+.+     ..|...++..  ++ ...+..       ....+.++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~v~~-~~~s~~g~~l~s~~~d-----~~i~iwd~~~--~~~~~~~~~-------~~~~v~s~  249 (371)
T d1k8kc_         185 GSKMPFGELMFESSSSCGWVHG-VCFSANGSRVAWVSHD-----STVCLADADK--KMAVATLAS-------ETLPLLAV  249 (371)
T ss_dssp             BSCCCTTCEEEECCCCSSCEEE-EEECSSSSEEEEEETT-----TEEEEEEGGG--TTEEEEEEC-------SSCCEEEE
T ss_pred             cccccceeeeeeccCccCcEEE-EEeecccccccccccC-----CcceEEeeec--ccceeeeec-------ccccceee
Confidence                     0001111222333 7899999988877765     3455666654  22 122221       34567889


Q ss_pred             EEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          419 TFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       419 ~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      .|+||++.++...  .+...++..+....+.
T Consensus       250 ~fs~d~~~la~g~--d~~~~~~~~~~~~~~~  278 (371)
T d1k8kc_         250 TFITESSLVAAGH--DCFPVLFTYDSAAGKL  278 (371)
T ss_dssp             EEEETTEEEEEET--TSSCEEEEEETTTTEE
T ss_pred             eecCCCCEEEEEc--CCceEEEEeeCCCceE
Confidence            9999998775432  2355666666555443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.69  E-value=4.3e-06  Score=85.45  Aligned_cols=181  Identities=7%  Similarity=-0.055  Sum_probs=95.8

Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcc--cccCCceeEccCCCEEEEEEccccc--------
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGW--FEPFDHLRFSSDGKKMLLILSHNQE--------  320 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~--~~~~~~~~~spDg~~i~~~~~~~~~--------  320 (790)
                      .+.||||||.+++.+...+  .+.++|+++++.............  ........+++||+.+++.......        
T Consensus       128 ~~a~SpDGk~l~va~~~~~--~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~  205 (368)
T d1mdah_         128 IIGNCASSACLLFFLFGSS--AAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQ  205 (368)
T ss_dssp             SEEECTTSSCEEEEECSSS--CEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCC
T ss_pred             ceEECCCCCEEEEEeCCCC--eEEEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCCceeeeeeecc
Confidence            3679999995555543322  388889888876555433211110  0112235668888866543221000        


Q ss_pred             ---------------cCCCCCcCcccEEEEEEcCCCCcccCCCcccccC----------CCeEE--eEEEeeecCCCEEE
Q psy463          321 ---------------SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR----------GRFTV--TEILAWDEKENNVY  373 (790)
Q Consensus       321 ---------------~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~----------~~~~~--~~~~~~s~dg~~l~  373 (790)
                                     .++.........++++++.+++      ...+..          ..+..  ...++++++++.+|
T Consensus       206 ~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~  279 (368)
T d1mdah_         206 CTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAG------ATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIM  279 (368)
T ss_dssp             SCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSC------CEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEE
T ss_pred             cccccccceeecccccCcEEEEecCCCEEEEeecCCc------eEEEeecccccceeeeeeecCCCceeEEEcCCCCEEE
Confidence                           0000000001134556655443      221111          01111  11267899999888


Q ss_pred             EEEcCC----CCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463          374 FLSTQG----SPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       374 ~~~~~~----~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                      +....+    .....+|+.++..+  ++. ..+..        ......+.|||||+.++|..... -..|+++|..+++
T Consensus       280 v~~~~~~~~~~~~~~~v~v~D~~t--~~~~~~~~~--------~~~~~~~a~spDG~~~ly~s~~~-~~~v~v~D~~tgk  348 (368)
T d1mdah_         280 ILTVEHSRSCLAAAENTSSVTASV--GQTSGPISN--------GHDSDAIIAAQDGASDNYANSAG-TEVLDIYDAASDQ  348 (368)
T ss_dssp             EEEEECSSCTTSCEEEEEEEESSS--CCEEECCEE--------EEEECEEEECCSSSCEEEEEETT-TTEEEEEESSSCE
T ss_pred             EEecCCCceeecCCceEEEEECCC--CcEeEEecC--------CCceeEEEECCCCCEEEEEEeCC-CCeEEEEECCCCC
Confidence            775542    12336799999877  432 22221        23456789999998766655443 3679999998765


Q ss_pred             EE
Q psy463          449 LL  450 (790)
Q Consensus       449 ~~  450 (790)
                      ..
T Consensus       349 ~~  350 (368)
T d1mdah_         349 DQ  350 (368)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.68  E-value=2.9e-06  Score=83.65  Aligned_cols=236  Identities=12%  Similarity=0.090  Sum_probs=128.0

Q ss_pred             cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463          114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      .+|||||+.|+- .+.++            .|.++++.+++     ....+..+......-+.|.+++.  ++..+.   
T Consensus        18 l~~s~dg~~l~s-~s~Dg------------~v~vWd~~~~~-----~~~~~~~~h~~~v~~v~~~~~g~--~~~~~~---   74 (299)
T d1nr0a2          18 LSSSADGKTLFS-ADAEG------------HINSWDISTGI-----SNRVFPDVHATMITGIKTTSKGD--LFTVSW---   74 (299)
T ss_dssp             EEECTTSSEEEE-EETTS------------CEEEEETTTCC-----EEECSSCSCSSCEEEEEECTTSC--EEEEET---
T ss_pred             EEECCCCCEEEE-EcCCC------------eEEEEECCCCc-----EEEEEcCCCCCcEEEEEeeccce--eecccc---
Confidence            488999997763 32222            68888988774     22223322222223345666543  333221   


Q ss_pred             CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463          194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI  273 (790)
Q Consensus       194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i  273 (790)
                               ...+.+++..+......   ..+.                .........+.|+|||++++.....    .+
T Consensus        75 ---------d~~v~~~~~~~~~~~~~---~~~~----------------~~~~~~~~~~~~s~~g~~~~~~~~~----~i  122 (299)
T d1nr0a2          75 ---------DDHLKVVPAGGSGVDSS---KAVA----------------NKLSSQPLGLAVSADGDIAVAACYK----HI  122 (299)
T ss_dssp             ---------TTEEEEECSSSSSSCTT---SCCE----------------EECSSCEEEEEECTTSSCEEEEESS----EE
T ss_pred             ---------eeeEEEeccCCcccccc---cccc----------------ccccccccccccccccccccccccc----cc
Confidence                     14666666654321110   1111                0223445678999999955544332    25


Q ss_pred             EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc--
Q psy463          274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP--  351 (790)
Q Consensus       274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~--  351 (790)
                      .+.+.  ++...+....       ......|+||++.|+ +.+    .+|        .|.++|+.+++      ...  
T Consensus       123 ~~~~~--~~~~~~~~~~-------~~~~~~~s~~~~~l~-~g~----~dg--------~i~~~d~~~~~------~~~~~  174 (299)
T d1nr0a2         123 AIYSH--GKLTEVPISY-------NSSCVALSNDKQFVA-VGG----QDS--------KVHVYKLSGAS------VSEVK  174 (299)
T ss_dssp             EEEET--TEEEEEECSS-------CEEEEEECTTSCEEE-EEE----TTS--------EEEEEEEETTE------EEEEE
T ss_pred             ccccc--cccccccccc-------ccccccccccccccc-ccc----ccc--------ccccccccccc------ccccc
Confidence            55553  2222222110       123578999999887 454    455        68888887665      322  


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      ...+...+.. ++|+|+++.|+..+..+     .++..++..  +........   .......+..+.|+|++++++...
T Consensus       175 ~~~~~~~i~~-~~~~~~~~~l~~~~~d~-----~i~~~~~~~--~~~~~~~~~---~~~h~~~v~~l~~s~~~~~l~sgs  243 (299)
T d1nr0a2         175 TIVHPAEITS-VAFSNNGAFLVATDQSR-----KVIPYSVAN--NFELAHTNS---WTFHTAKVACVSWSPDNVRLATGS  243 (299)
T ss_dssp             EEECSSCEEE-EEECTTSSEEEEEETTS-----CEEEEEGGG--TTEESCCCC---CCCCSSCEEEEEECTTSSEEEEEE
T ss_pred             cccccccccc-ccccccccccccccccc-----ccccccccc--ccccccccc---ccccccccccccccccccceEEEc
Confidence            1222333444 78999999887766553     455556544  221111110   111345677889999999887643


Q ss_pred             ecCCCCeEEEEecCC
Q psy463          432 IGPGIPEIMLFDKTG  446 (790)
Q Consensus       432 ~~~~~~~i~~~~~~~  446 (790)
                      ..   ..++++++..
T Consensus       244 ~d---g~i~iwd~~~  255 (299)
T d1nr0a2         244 LD---NSVIVWNMNK  255 (299)
T ss_dssp             TT---SCEEEEETTC
T ss_pred             CC---CEEEEEECCC
Confidence            32   3578888765

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.66  E-value=4.7e-06  Score=83.43  Aligned_cols=112  Identities=13%  Similarity=-0.023  Sum_probs=73.4

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .....+..++|+|||++++....+.   .|.+++................   .......|+|||+.|+ +.+    .+|
T Consensus       224 ~h~~~i~~v~~~p~~~~l~s~s~d~---~i~~~~~~~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~-~g~----~dg  292 (340)
T d1tbga_         224 GHESDINAICFFPNGNAFATGSDDA---TCRLFDLRADQELMTYSHDNII---CGITSVSFSKSGRLLL-AGY----DDF  292 (340)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEEECCTTCC---SCEEEEEECSSSCEEE-EEE----TTS
T ss_pred             CCCCCeEEEEECCCCCEEEEEeCCC---eEEEEeeccccccccccccccc---CceEEEEECCCCCEEE-EEE----CCC
Confidence            3455678899999999655544332   2888888877654443321111   1134688999999876 555    456


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCC
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS  380 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~  380 (790)
                              .|.++|+.+++     ....+..+...+.. ++|+||++.|+-.+.++.
T Consensus       293 --------~i~iwd~~~~~-----~~~~~~~H~~~V~~-l~~s~d~~~l~s~s~Dg~  335 (340)
T d1tbga_         293 --------NCNVWDALKAD-----RAGVLAGHDNRVSC-LGVTDDGMAVATGSWDSF  335 (340)
T ss_dssp             --------CEEEEETTTCC-----EEEEECCCSSCEEE-EEECTTSSCEEEEETTSC
T ss_pred             --------EEEEEECCCCc-----EEEEEcCCCCCEEE-EEEeCCCCEEEEEccCCE
Confidence                    58899998776     24455555555555 789999997776665543

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.63  E-value=2.3e-06  Score=85.73  Aligned_cols=282  Identities=11%  Similarity=-0.004  Sum_probs=141.3

Q ss_pred             EEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCccee
Q psy463           84 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP  163 (790)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~  163 (790)
                      .+.++|..++++...+........   +...+|||||++++.....++            .|+++|+.+++     ....
T Consensus        12 ~v~v~D~~s~~~~~~i~~~~~~~~---~~~i~~spDg~~l~v~~~~~~------------~v~v~D~~t~~-----~~~~   71 (337)
T d1pbyb_          12 KLVVIDTEKMAVDKVITIADAGPT---PMVPMVAPGGRIAYATVNKSE------------SLVKIDLVTGE-----TLGR   71 (337)
T ss_dssp             EEEEEETTTTEEEEEEECTTCTTC---CCCEEECTTSSEEEEEETTTT------------EEEEEETTTCC-----EEEE
T ss_pred             EEEEEECCCCeEEEEEECCCCCCC---ccEEEECCCCCEEEEEECCCC------------eEEEEECCCCc-----EEEE
Confidence            456678777776654443222211   235699999998876543322            79999998874     2222


Q ss_pred             c--cccceEEEE--EEeeeccCCccEEEEecccCCCCCC-CccccceeEEEecCCcccccCcCCccccccccceeehhhc
Q psy463          164 L--TRGRFTVTE--ILAWDERENNPLLILSHNQESDGST-PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW  238 (790)
Q Consensus       164 l--t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~  238 (790)
                      +  ..+......  -.+++++++  .+|........... .......+.++|..+++..+.     +             
T Consensus        72 ~~~~~~~~~~~~~~~v~~s~dg~--~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-----~-------------  131 (337)
T d1pbyb_          72 IDLSTPEERVKSLFGAALSPDGK--TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA-----F-------------  131 (337)
T ss_dssp             EECCBTTEEEECTTCEEECTTSS--EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEE-----E-------------
T ss_pred             EecCCCcccccceeeEEEcCCCc--EEEEeecCCcceeeeccccccceeeccccCCeEEEe-----c-------------
Confidence            2  222222221  145666665  33333221110000 002335677778777653211     1             


Q ss_pred             ccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccc
Q psy463          239 DEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN  318 (790)
Q Consensus       239 ~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~  318 (790)
                           ........+.|||||++++..+..     +.++|..+++........  .    ......++|++..+.......
T Consensus       132 -----~~~~~~~~~~~s~dg~~l~~~~~~-----~~~~d~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~  195 (337)
T d1pbyb_         132 -----EAPRQITMLAWARDGSKLYGLGRD-----LHVMDPEAGTLVEDKPIQ--S----WEAETYAQPDVLAVWNQHESS  195 (337)
T ss_dssp             -----ECCSSCCCEEECTTSSCEEEESSS-----EEEEETTTTEEEEEECST--T----TTTTTBCCCBCCCCCCCCTTT
T ss_pred             -----cccCCceEEEEcCCCCEEEEEcCC-----cceeeeecCcEEEEeecC--C----ccccceecCCcceeecccccc
Confidence                 112223457899999966665433     677888888665433221  1    122344555555332110000


Q ss_pred             ---------cccCCC--CCcCcccEEEEEEcCCCCcccCCCccc--ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEE
Q psy463          319 ---------QESDGS--TPVDSWDHLTFIDLDDQAGIKDKVPVP--LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQH  385 (790)
Q Consensus       319 ---------~~~~g~--~~~~~~~~l~~~d~~~~~~~~~~~~~~--lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~  385 (790)
                               ......  ........+.+++...++      ...  +....... ....++++++.++...       ..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~  261 (337)
T d1pbyb_         196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE------MAMREVRIMDVFY-FSTAVNPAKTRAFGAY-------NV  261 (337)
T ss_dssp             TEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC------EEEEEEEECSSCE-EEEEECTTSSEEEEEE-------SE
T ss_pred             ceeeeeeeeeeeccceeeecccCccEEEEEcCCCc------EEEEEecCCCcce-EEEEecccceEEEEcc-------cc
Confidence                     000000  000012346666766554      222  11111111 2256788888765442       35


Q ss_pred             EEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          386 MYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       386 l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      |..+++.+  ++......       .......+.|||||++++....   ...|.++|.++.
T Consensus       262 i~v~d~~~--~~~~~~~~-------~~~~~~~~~~s~dG~~l~v~~~---~~~i~v~D~~t~  311 (337)
T d1pbyb_         262 LESFDLEK--NASIKRVP-------LPHSYYSVNVSTDGSTVWLGGA---LGDLAAYDAETL  311 (337)
T ss_dssp             EEEEETTT--TEEEEEEE-------CSSCCCEEEECTTSCEEEEESB---SSEEEEEETTTC
T ss_pred             EEEEECCC--CcEEEEEc-------CCCCEEEEEECCCCCEEEEEeC---CCcEEEEECCCC
Confidence            66778766  33222111       1234567899999998876422   356999999874

>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.61  E-value=7.1e-08  Score=94.23  Aligned_cols=102  Identities=14%  Similarity=0.099  Sum_probs=69.9

Q ss_pred             CCCccEEEEEcCCCCccccc--cccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHH
Q psy463          498 HKKYPLLIHVYGGPSSFQVT--ERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQ  575 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~--~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~  575 (790)
                      ..++| ||++||..+.....  ..|.  -....+.+.||.|+++|++|.+...             ...+++.+.++.+.
T Consensus         5 ~~~~P-vvlvHG~~g~~~~~~~~yw~--~i~~~L~~~G~~v~~~~~~~~~~~~-------------~~a~~l~~~i~~~~   68 (285)
T d1ex9a_           5 QTKYP-IVLAHGMLGFDNILGVDYWF--GIPSALRRDGAQVYVTEVSQLDTSE-------------VRGEQLLQQVEEIV   68 (285)
T ss_dssp             CCSSC-EEEECCTTCCSEETTEESST--THHHHHHHTTCCEEEECCCSSSCHH-------------HHHHHHHHHHHHHH
T ss_pred             CCCCC-EEEECCCCCCccccchhhHH--HHHHHHHhCCCEEEEeCCCCCCCcH-------------HHHHHHHHHHHHHH
Confidence            45678 67899977652211  1122  2344555689999999999865311             12345555566555


Q ss_pred             HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      +..   ..+|+.++||||||.++..++..+|+ +++.++.+++.
T Consensus        69 ~~~---g~~~v~ligHS~GG~~~r~~~~~~p~-~v~~lv~i~tP  108 (285)
T d1ex9a_          69 ALS---GQPKVNLIGHSHGGPTIRYVAAVRPD-LIASATSVGAP  108 (285)
T ss_dssp             HHH---CCSCEEEEEETTHHHHHHHHHHHCGG-GEEEEEEESCC
T ss_pred             HHc---CCCeEEEEEECccHHHHHHHHHHCCc-cceeEEEECCC
Confidence            533   35789999999999999999999886 78888877764

>d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase
species: Chromobacterium viscosum [TaxId: 42739]

Probab=98.57  E-value=6.6e-08  Score=96.70  Aligned_cols=106  Identities=11%  Similarity=0.110  Sum_probs=73.1

Q ss_pred             CCCccEEEEEcCCCCcccccc---ccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHH
Q psy463          498 HKKYPLLIHVYGGPSSFQVTE---RFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYL  574 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~---~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l  574 (790)
                      +.++|+| ++||..+......   .|. . ....+++.||.|+++|++|.+.+...          ....+++.+.++.+
T Consensus         6 ~~k~Pvv-lvHG~~g~~~~~~~~~~~~-~-~~~~L~~~G~~V~~~~~~g~g~s~~~----------~~~~~~l~~~i~~~   72 (319)
T d1cvla_           6 ATRYPVI-LVHGLAGTDKFANVVDYWY-G-IQSDLQSHGAKVYVANLSGFQSDDGP----------NGRGEQLLAYVKQV   72 (319)
T ss_dssp             CCSSCEE-EECCTTBSSEETTTEESST-T-HHHHHHHTTCCEEECCCBCSSCTTST----------TSHHHHHHHHHHHH
T ss_pred             CCCCCEE-EECCCCCCcchhhhhhhHH-H-HHHHHHHCCCEEEEecCCCCCCCCCC----------cccHHHHHHHHHHH
Confidence            4567864 6899877532111   122 2 33445568999999999987643211          12355666667666


Q ss_pred             HHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          575 QENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       575 ~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      .+..   +.++|.++||||||.++..++.++|+ +++.++.+++..
T Consensus        73 ~~~~---~~~~v~lvGhS~GG~~~~~~~~~~p~-~v~~vv~i~~p~  114 (319)
T d1cvla_          73 LAAT---GATKVNLIGHSQGGLTSRYVAAVAPQ-LVASVTTIGTPH  114 (319)
T ss_dssp             HHHH---CCSCEEEEEETTHHHHHHHHHHHCGG-GEEEEEEESCCT
T ss_pred             HHHh---CCCCEEEEeccccHHHHHHHHHHCcc-ccceEEEECCCC
Confidence            6533   45899999999999999999999986 888888887753

>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Type-B carboxylesterase/lipase
species: Candida cylindracea, cholesterol esterase [TaxId: 44322]

Probab=98.53  E-value=7.1e-08  Score=104.40  Aligned_cols=133  Identities=18%  Similarity=0.257  Sum_probs=87.4

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc--hHHHHHhcCCeEEEEEcCCCCCCChhhhH-hhhhccC
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD--WNLYLADNKDIVVAYIDGRNSALKGNTLK-YAGYRRL  559 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~--~~~~~~~~~G~~v~~~d~rG~~~~g~~~~-~~~~~~~  559 (790)
                      |..-++.|....  ..+++||||++|||.........+...  ....+++.++++||.++||-.. .|.-.. .......
T Consensus        98 L~LnI~~P~~~~--~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~-~GFl~~~~~~~~~~  174 (534)
T d1llfa_          98 LTINVVRPPGTK--AGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVAS-WGFLAGDDIKAEGS  174 (534)
T ss_dssp             CEEEEEECTTCC--TTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHH-HHHCCSHHHHHHTC
T ss_pred             CEEEEEECCCCC--CCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCc-ccccCCcccccccc
Confidence            555678887655  567899999999998754323333322  1234455689999999999522 221100 0011123


Q ss_pred             CccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcC-----C--CCceEEEEEeCCC
Q psy463          560 GTVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALD-----P--SNVFKCGISVAPV  619 (790)
Q Consensus       560 ~~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~-----p--~~~~~~~v~~~~~  619 (790)
                      |...+.|+..+++|+.++   ++ -|+++|.|+|+|.||..+...+...     |  ...|..+|+.+|.
T Consensus       175 gN~Gl~Dq~~AL~WV~~nI~~FG-GDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs  243 (534)
T d1llfa_         175 GNAGLKDQRLGMQWVADNIAGFG-GDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA  243 (534)
T ss_dssp             TTHHHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred             cccchhHHHHHHHHHHhhhhhhc-cCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence            345688999999999886   34 6899999999999999776544311     1  1258888888874

>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases
domain: Fatty acid synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.5e-08  Score=98.01  Aligned_cols=89  Identities=17%  Similarity=0.085  Sum_probs=55.8

Q ss_pred             CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHH-HHHHHHH
Q psy463          498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQIN-VTRYLQE  576 (790)
Q Consensus       498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~  576 (790)
                      +.+.| ||++||++++.   ..|.     .++...++.|+.+|.+|.+.+..              ++++.+ .+..+.+
T Consensus        23 ~~~~P-l~l~Hg~~gs~---~~~~-----~l~~~L~~~v~~~d~~g~~~~~~--------------~~~~a~~~~~~~~~   79 (286)
T d1xkta_          23 SSERP-LFLVHPIEGST---TVFH-----SLASRLSIPTYGLQCTRAAPLDS--------------IHSLAAYYIDCIRQ   79 (286)
T ss_dssp             CCSCC-EEEECCTTCCC---GGGH-----HHHHTCSSCEEEECCCTTSCCSC--------------HHHHHHHHHHHHHH
T ss_pred             CCCCe-EEEECCCCccH---HHHH-----HHHHHcCCeEEEEeCCCCCCCCC--------------HHHHHHHHHHHHHH
Confidence            34456 67999999873   2222     23333478899999999765321              222222 2233344


Q ss_pred             hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEE
Q psy463          577 NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCG  613 (790)
Q Consensus       577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~  613 (790)
                      ..+   ..++.++||||||.+|+.+|.++|. +...+
T Consensus        80 ~~~---~~~~~lvGhS~Gg~vA~~~A~~~p~-~~~~v  112 (286)
T d1xkta_          80 VQP---EGPYRVAGYSYGACVAFEMCSQLQA-QQSPA  112 (286)
T ss_dssp             HCC---SSCCEEEEETHHHHHHHHHHHHHHH-C----
T ss_pred             hcC---CCceEEeecCCccHHHHHHHHHHHH-cCCCc
Confidence            233   4789999999999999999998885 44443

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.51  E-value=7.9e-05  Score=75.43  Aligned_cols=181  Identities=9%  Similarity=0.006  Sum_probs=87.1

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ....+.++|||++++..+.+.+.-.+|..+. ++....+........ -.......|+|||+.++ +..   +.++    
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~-~g~~~~~~~~~~~~~-g~gPr~i~f~pdg~~~y-v~~---e~~~----  215 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLA-SGEVELVGSVDAPDP-GDHPRWVAMHPTGNYLY-ALM---EAGN----  215 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECT-TSCEEEEEEEECSST-TCCEEEEEECTTSSEEE-EEE---TTTT----
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccC-CCceeeccceeecCC-CCceEEEEECCCCceEE-Eec---cCCC----
Confidence            3568899999998888877665533444332 343333322211000 00123589999999777 444   3333    


Q ss_pred             CcccEEEEEEcCCCCcccCC--CcccccC-----------CCeEEeEEEeeecCCCEEEEEEcC-CCCceEEEEEEEcCC
Q psy463          328 DSWDHLTFIDLDDQAGIKDK--VPVPLTR-----------GRFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMYRINIAD  393 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~--~~~~lt~-----------~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~  393 (790)
                          .|.+++.++++.....  ....+..           ........+.++|||+.||..... .......|..+.++.
T Consensus       216 ----~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~  291 (365)
T d1jofa_         216 ----RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD  291 (365)
T ss_dssp             ----EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred             ----EEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecC
Confidence                6777777654310000  0000110           000112236789999988776443 211122344444432


Q ss_pred             CCCCcceeeecccccCCCcccEEEEEEec-CCcEEEEEeecCCCCeEEEEecCC
Q psy463          394 PTATPECITCDLLTSANQKCSYSGATFST-NVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       394 ~~~~~~~lt~~~~~~~~~~~~~~~~~~s~-dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      . +............. ....-..+.++| +|++++.....  -..|.+++.++
T Consensus       292 ~-g~~~~~~~~~~~~~-~G~~p~~i~~~p~~G~~l~va~~~--s~~v~v~~~~~  341 (365)
T d1jofa_         292 C-GSIEKQLFLSPTPT-SGGHSNAVSPCPWSDEWMAITDDQ--EGWLEIYRWKD  341 (365)
T ss_dssp             T-SCEEEEEEEEECSS-CCTTCCCEEECTTCTTEEEEECSS--SCEEEEEEEET
T ss_pred             C-CceeeEeEeeEEEc-CCCCccEEEecCCCCCEEEEEeCC--CCeEEEEEEeC
Confidence            1 23222221000000 112233478898 79988666333  34555554433

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.47  E-value=7.9e-06  Score=81.66  Aligned_cols=73  Identities=10%  Similarity=0.054  Sum_probs=52.0

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ........++|++++++..+.     .|.++|+.+++.........      ....+.|||||+.|+ +.+    .+|  
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~-----~i~v~d~~~~~~~~~~~~~~------~~~~~~~s~dG~~l~-v~~----~~~--  301 (337)
T d1pbyb_         240 DVFYFSTAVNPAKTRAFGAYN-----VLESFDLEKNASIKRVPLPH------SYYSVNVSTDGSTVW-LGG----ALG--  301 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEEES-----EEEEEETTTTEEEEEEECSS------CCCEEEECTTSCEEE-EES----BSS--
T ss_pred             CcceEEEEecccceEEEEccc-----cEEEEECCCCcEEEEEcCCC------CEEEEEECCCCCEEE-EEe----CCC--
Confidence            344567789999996655542     38999999987765444321      144799999999887 454    445  


Q ss_pred             CcCcccEEEEEEcCCCC
Q psy463          326 PVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~  342 (790)
                            .|.++|+++.+
T Consensus       302 ------~i~v~D~~t~~  312 (337)
T d1pbyb_         302 ------DLAAYDAETLE  312 (337)
T ss_dssp             ------EEEEEETTTCC
T ss_pred             ------cEEEEECCCCc
Confidence                  69999998876

>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Thermophilic para-nitrobenzyl esterase (PNB esterase)
species: Bacillus subtilis [TaxId: 1423]

Probab=98.43  E-value=9.5e-08  Score=102.10  Aligned_cols=132  Identities=18%  Similarity=0.249  Sum_probs=88.0

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh-hhccCCc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA-GYRRLGT  561 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~-~~~~~~~  561 (790)
                      |+.-++.|..    ..+++||||++|||.....-...+.. ....++++.+++||.++||-.. .|.-.... .....|.
T Consensus        82 L~lni~~P~~----~~~~lPV~v~ihGG~~~~g~~~~~~~-~~~~~~~~~~vVvV~~nYRlg~-~GFl~~~~~~~~~~gN  155 (483)
T d1qe3a_          82 LYVNVFAPDT----PSQNLPVMVWIHGGAFYLGAGSEPLY-DGSKLAAQGEVIVVTLNYRLGP-FGFLHLSSFDEAYSDN  155 (483)
T ss_dssp             CEEEEEEECS----SCCSEEEEEEECCSTTTSCCTTSGGG-CCHHHHHHHTCEEEEECCCCHH-HHSCCCTTTCTTSCSC
T ss_pred             CEEEEEECCC----CCCCCceEEEEeecccccCCcccccc-ccccccccCceEEEeecccccc-hhhccccccccccccc
Confidence            5566777875    45789999999999865332222221 1234555568999999999421 22110001 0112234


Q ss_pred             cchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCCC
Q psy463          562 VEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVTD  621 (790)
Q Consensus       562 ~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~~  621 (790)
                      ..+.|+..|++|+.++   +| -|+++|.|+|+|.||..+..++.... ...|..+|+.+|...
T Consensus       156 ~Gl~Dq~~AL~WV~~nI~~FG-GDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~  218 (483)
T d1qe3a_         156 LGLLDQAAALKWVRENISAFG-GDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASR  218 (483)
T ss_dssp             HHHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCC
T ss_pred             cccHHHHHHHHHHHHHHHHcC-CCcccceeeccccccchhhhhhcccccCCcceeeccccCCcc
Confidence            5689999999999876   34 68999999999999999887766322 248999998888643

>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Type-B carboxylesterase/lipase
species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]

Probab=98.43  E-value=1.7e-07  Score=101.42  Aligned_cols=133  Identities=18%  Similarity=0.242  Sum_probs=87.8

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc--hHHHHHhcCCeEEEEEcCCCCCCChhhhHhh-hhccC
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD--WNLYLADNKDIVVAYIDGRNSALKGNTLKYA-GYRRL  559 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~--~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~-~~~~~  559 (790)
                      |+.-++.|.+..  ..+++||||++|||.........+...  ....+++..+++||.++||-.. .|.-.... .....
T Consensus       106 L~LnI~~P~~~~--~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~-~Gfl~~~~~~~~~~  182 (544)
T d1thga_         106 LYLNVFRPAGTK--PDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FGFLGGDAITAEGN  182 (544)
T ss_dssp             CEEEEEEETTCC--TTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HHHCCSHHHHHHTC
T ss_pred             CEEEEEECCCCC--CCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEeccccccc-ccccCCchhhcccc
Confidence            556677887655  567899999999998764322222221  2234556789999999999421 22110000 01112


Q ss_pred             CccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcC-------CCCceEEEEEeCCC
Q psy463          560 GTVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALD-------PSNVFKCGISVAPV  619 (790)
Q Consensus       560 ~~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~-------p~~~~~~~v~~~~~  619 (790)
                      +...+.|+..+++|+.++   ++ -|+++|.|+|+|.||..+...+...       ....|..+|+.+|.
T Consensus       183 gN~Gl~Dq~~AL~WV~~nI~~FG-GDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~  251 (544)
T d1thga_         183 TNAGLHDQRKGLEWVSDNIANFG-GDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG  251 (544)
T ss_dssp             TTHHHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred             ccHHHHHhhhhhhhhhhhhcccc-cCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence            335588999999999876   34 6889999999999998877665421       11378888888764

>d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: TTHA1544-like
domain: Hypothetical protein TTHA1544
species: Thermus thermophilus [TaxId: 274]

Probab=98.40  E-value=3.4e-07  Score=75.50  Aligned_cols=93  Identities=11%  Similarity=-0.024  Sum_probs=65.2

Q ss_pred             CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463          479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR  558 (790)
Q Consensus       479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~  558 (790)
                      +|.++++...        .  .-|.||++||...      .|.     ..++ .+|.|+++|.||+|.+..+        
T Consensus         9 ~G~~l~y~~~--------G--~G~pvlllHG~~~------~w~-----~~L~-~~yrvi~~DlpG~G~S~~p--------   58 (122)
T d2dsta1           9 YGLNLVFDRV--------G--KGPPVLLVAEEAS------RWP-----EALP-EGYAFYLLDLPGYGRTEGP--------   58 (122)
T ss_dssp             TTEEEEEEEE--------C--CSSEEEEESSSGG------GCC-----SCCC-TTSEEEEECCTTSTTCCCC--------
T ss_pred             CCEEEEEEEE--------c--CCCcEEEEecccc------ccc-----cccc-CCeEEEEEeccccCCCCCc--------
Confidence            7888888765        2  2367888998532      222     1233 6999999999998765321        


Q ss_pred             CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC
Q psy463          559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP  606 (790)
Q Consensus       559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p  606 (790)
                        ....+++.+.+..+++.+   +..+..|+||||||.+++.++...+
T Consensus        59 --~~s~~~~a~~i~~ll~~L---~i~~~~viG~S~Gg~ia~~laa~~~  101 (122)
T d2dsta1          59 --RMAPEELAHFVAGFAVMM---NLGAPWVLLRGLGLALGPHLEALGL  101 (122)
T ss_dssp             --CCCHHHHHHHHHHHHHHT---TCCSCEEEECGGGGGGHHHHHHTTC
T ss_pred             --ccccchhHHHHHHHHHHh---CCCCcEEEEeCccHHHHHHHHhhcc
Confidence              134566666666666643   4578999999999999999888554

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.40  E-value=1.9e-05  Score=78.43  Aligned_cols=219  Identities=12%  Similarity=0.180  Sum_probs=119.1

Q ss_pred             EeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEE
Q psy463          175 LAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNW  254 (790)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~w  254 (790)
                      ..||++++  +||.-.           ....|++++.++++....     +.                 ........+++
T Consensus        45 ~~~D~~G~--Ly~~D~-----------~~g~I~ri~p~g~~~~~~-----~~-----------------~~~~~p~gla~   89 (319)
T d2dg1a1          45 LNFDRQGQ--LFLLDV-----------FEGNIFKINPETKEIKRP-----FV-----------------SHKANPAAIKI   89 (319)
T ss_dssp             EEECTTSC--EEEEET-----------TTCEEEEECTTTCCEEEE-----EE-----------------CSSSSEEEEEE
T ss_pred             CEECCCCC--EEEEEC-----------CCCEEEEEECCCCeEEEE-----Ee-----------------CCCCCeeEEEE
Confidence            57787654  666532           125789998887642111     11                 22233457889


Q ss_pred             ccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEE
Q psy463          255 ANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHL  333 (790)
Q Consensus       255 spDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l  333 (790)
                      +|||+ +++..........++.++..++....+..... ..  .......+.|||+ |++..........      ...+
T Consensus        90 ~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~--~~~nd~~~d~~G~-l~vtd~~~~~~~~------~g~v  159 (319)
T d2dg1a1          90 HKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS-TA--YCIDDMVFDSKGG-FYFTDFRGYSTNP------LGGV  159 (319)
T ss_dssp             CTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS-SC--CCEEEEEECTTSC-EEEEECCCBTTBC------CEEE
T ss_pred             CCCCCEEEEecCCCccceeEEEEcCCCceeeeeccCCC-cc--cCCcceeEEeccc-eeecccccccccC------ccee
Confidence            99999 44433222234458888888877665543211 11  1123578999997 6644431111111      4468


Q ss_pred             EEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcc
Q psy463          334 TFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKC  413 (790)
Q Consensus       334 ~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~  413 (790)
                      ++++.+++.      .+.+..+ .....-++|+||++.||+.....    ..|++++++..................+..
T Consensus       160 ~~~~~dg~~------~~~~~~~-~~~pnGia~s~dg~~lyvad~~~----~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~  228 (319)
T d2dg1a1         160 YYVSPDFRT------VTPIIQN-ISVANGIALSTDEKVLWVTETTA----NRLHRIALEDDGVTIQPFGATIPYYFTGHE  228 (319)
T ss_dssp             EEECTTSCC------EEEEEEE-ESSEEEEEECTTSSEEEEEEGGG----TEEEEEEECTTSSSEEEEEEEEEEECCSSS
T ss_pred             EEEecccce------eEEEeec-cceeeeeeeccccceEEEecccC----CceEEEEEcCCCceeccccceeeeccCCcc
Confidence            999887765      5554432 11223389999999998886653    478888876421111111110000001122


Q ss_pred             cEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463          414 SYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       414 ~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                      .-..+.+..+|..++...   ....|.+++.+++.+..+
T Consensus       229 ~PdGl~vD~~G~l~Va~~---~~g~V~~~~p~G~~l~~i  264 (319)
T d2dg1a1         229 GPDSCCIDSDDNLYVAMY---GQGRVLVFNKRGYPIGQI  264 (319)
T ss_dssp             EEEEEEEBTTCCEEEEEE---TTTEEEEECTTSCEEEEE
T ss_pred             ceeeeeEcCCCCEEEEEc---CCCEEEEECCCCcEEEEE
Confidence            344577888887554432   234677777666544444

>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Esterase EstA
species: Aspergillus niger [TaxId: 5061]

Probab=98.38  E-value=4.1e-07  Score=97.83  Aligned_cols=133  Identities=17%  Similarity=0.188  Sum_probs=85.6

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH-hhhhccCCc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK-YAGYRRLGT  561 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~-~~~~~~~~~  561 (790)
                      |..-++.|....  ..+++||||++|||.....-...+... ...++...+.+||.++||-.. .|.-.. .......+.
T Consensus        81 L~LnI~~P~~~~--~~~~~PV~v~ihGG~~~~G~~~~~~~~-~~~~~~~~~vVvVt~nYRlg~-~GFl~~~~~~~~~~~N  156 (517)
T d1ukca_          81 LFINVFKPSTAT--SQSKLPVWLFIQGGGYAENSNANYNGT-QVIQASDDVIVFVTFNYRVGA-LGFLASEKVRQNGDLN  156 (517)
T ss_dssp             CEEEEEEETTCC--TTCCEEEEEEECCSTTTSCCSCSCCCH-HHHHHTTSCCEEEEECCCCHH-HHHCCCHHHHHSSCTT
T ss_pred             CEEEEEeCCCCC--CCCCceEEEEEcCCccccCCCccccch-hhhhhhccccceEEEEecccc-eeecCccccccccccc
Confidence            455567787644  456789999999998764423333221 222344567899999999421 221100 000111223


Q ss_pred             cchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcC-C--CCceEEEEEeCCCC
Q psy463          562 VEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALD-P--SNVFKCGISVAPVT  620 (790)
Q Consensus       562 ~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~-p--~~~~~~~v~~~~~~  620 (790)
                      ..+.|+..|++|+.++   +| -|+++|.|+|+|.||..+...+... +  ...|..+|+.+|..
T Consensus       157 ~Gl~Dq~~AL~WV~~nI~~FG-GDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~  220 (517)
T d1ukca_         157 AGLLDQRKALRWVKQYIEQFG-GDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW  220 (517)
T ss_dssp             HHHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred             hhHHHHHHHHHHHHHHHHhhc-CCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence            5688999999999886   34 6889999999999999876554321 1  23788888888753

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.37  E-value=4.8e-05  Score=75.76  Aligned_cols=161  Identities=11%  Similarity=0.115  Sum_probs=87.7

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      ...|+|||+.|+........           .+.+++.++++     ....+......+.. ..|.+.++.  .+++.. 
T Consensus       120 ~v~~s~~~~~l~~~~~~~~~-----------~~~~~~~~~~~-----~~~~~~~h~~~v~~-~~~~~~~~~--~~~~~~-  179 (325)
T d1pgua1         120 DISWDFEGRRLCVVGEGRDN-----------FGVFISWDSGN-----SLGEVSGHSQRINA-CHLKQSRPM--RSMTVG-  179 (325)
T ss_dssp             EEEECTTSSEEEEEECCSSC-----------SEEEEETTTCC-----EEEECCSCSSCEEE-EEECSSSSC--EEEEEE-
T ss_pred             EEEECCCCCccceeeccccc-----------eEEEEeecccc-----cceeeeeccccccc-ccccccccc--eEEEee-
Confidence            35899999998876542221           35555655553     22333333333333 356665543  222221 


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcce
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRA  271 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~  271 (790)
                               ....|.+++...++..     ..+.              ..+.....+..+.|+||+. +++....+.   
T Consensus       180 ---------~d~~v~~~d~~~~~~~-----~~~~--------------~~~~~~~~v~~v~~~pd~~~~l~s~~~d~---  228 (325)
T d1pgua1         180 ---------DDGSVVFYQGPPFKFS-----ASDR--------------THHKQGSFVRDVEFSPDSGEFVITVGSDR---  228 (325)
T ss_dssp             ---------TTTEEEEEETTTBEEE-----EEEC--------------SSSCTTCCEEEEEECSTTCCEEEEEETTC---
T ss_pred             ---------cccccccccccccccc-----eecc--------------cccCCCCccEEeeeccccceecccccccc---
Confidence                     1145666666554311     1110              0013455678899999864 555443332   


Q ss_pred             EEEEEECCCCceeEEEEEeCCCcccccCCceeEc---cCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCC
Q psy463          272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFS---SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~s---pDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                      .|.++|..++++...+...  ..   ......|+   |||+.|+ +.+    .++        .|.++|+.+++
T Consensus       229 ~i~iwd~~~~~~~~~l~~~--~~---~v~~~~~s~~~~dg~~l~-s~s----~D~--------~i~iwd~~~~~  284 (325)
T d1pgua1         229 KISCFDGKSGEFLKYIEDD--QE---PVQGGIFALSWLDSQKFA-TVG----ADA--------TIRVWDVTTSK  284 (325)
T ss_dssp             CEEEEETTTCCEEEECCBT--TB---CCCSCEEEEEESSSSEEE-EEE----TTS--------EEEEEETTTTE
T ss_pred             ceeeeeecccccccccccc--cc---ccccceeeeeccCCCEEE-EEe----CCC--------eEEEEECCCCC
Confidence            2888899888765443321  11   12345565   7999887 555    455        68889998776

>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Acetylcholinesterase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=1.9e-07  Score=101.29  Aligned_cols=132  Identities=20%  Similarity=0.242  Sum_probs=85.6

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      |..-++.|...   ..+++||||++|||.....-....... ...++++.+.+||.++||-. -.|.-.........|..
T Consensus        97 L~LnI~~P~~~---~~~~lPV~v~ihGG~~~~gs~~~~~~~-~~~~~~~~~vvvVt~nYRlg-~~Gfl~~~~~~~~~gN~  171 (542)
T d2ha2a1          97 LYLNVWTPYPR---PASPTPVLIWIYGGGFYSGAASLDVYD-GRFLAQVEGAVLVSMNYRVG-TFGFLALPGSREAPGNV  171 (542)
T ss_dssp             CEEEEEEESSC---CSSCEEEEEEECCSTTTCCCTTSGGGC-THHHHHHHCCEEEEECCCCH-HHHHCCCTTCSSCCSCH
T ss_pred             CEEEEEecCCC---CCCCCcEEEEEEECccccccCcccccC-chhhhhhccceeEeeeeecc-ceeeecccccccCCCcC
Confidence            44556677642   357899999999987642211111111 22344557999999999942 12221001111223445


Q ss_pred             chhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCC
Q psy463          563 EIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVT  620 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~  620 (790)
                      .+.|+..+++|+.++   +| -|+++|.|+|+|.||..+..++.... ...|..+|+.++..
T Consensus       172 Gl~Dq~~AL~WV~~nI~~FG-GDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~  232 (542)
T d2ha2a1         172 GLLDQRLALQWVQENIAAFG-GDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP  232 (542)
T ss_dssp             HHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred             CcccHHHHHHHHHHHHHHhh-cCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence            689999999999876   44 68999999999999999887666322 24788888887743

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.35  E-value=0.00031  Score=68.36  Aligned_cols=234  Identities=13%  Similarity=0.056  Sum_probs=128.3

Q ss_pred             ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463          113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ  192 (790)
Q Consensus       113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (790)
                      .|.|.++.+.|+|+.-...            .|++++.++++.    ....+.   ..+.. .+.+.+++  +++...  
T Consensus        22 gp~wd~~~~~l~wvDi~~~------------~I~r~d~~~g~~----~~~~~~---~~~~~-i~~~~dg~--l~va~~--   77 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILER------------ELHELHLASGRK----TVHALP---FMGSA-LAKISDSK--QLIASD--   77 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGT------------EEEEEETTTTEE----EEEECS---SCEEE-EEEEETTE--EEEEET--
T ss_pred             CCeEECCCCEEEEEECCCC------------EEEEEECCCCeE----EEEECC---CCcEE-EEEecCCC--EEEEEe--
Confidence            5899998888988764332            899999988741    111221   12222 23444432  444322  


Q ss_pred             CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCc--
Q psy463          193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQN--  269 (790)
Q Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~--  269 (790)
                                 ..|+++|.++++.+.+..+   -               ..............|+|+ ++........  
T Consensus        78 -----------~gl~~~d~~tg~~~~l~~~---~---------------~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~  128 (295)
T d2ghsa1          78 -----------DGLFLRDTATGVLTLHAEL---E---------------SDLPGNRSNDGRMHPSGALWIGTMGRKAETG  128 (295)
T ss_dssp             -----------TEEEEEETTTCCEEEEECS---S---------------TTCTTEEEEEEEECTTSCEEEEEEETTCCTT
T ss_pred             -----------CccEEeecccceeeEEeee---e---------------cCCCcccceeeEECCCCCEEEEecccccccc
Confidence                       5799999998863222100   0               002233566788999999 4544443322  


Q ss_pred             ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463          270 RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP  349 (790)
Q Consensus       270 ~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~  349 (790)
                      ...+|..  ..|+.+.+...-.      ....+.||||++.+++.-+    .        ...|++++++..........
T Consensus       129 ~g~l~~~--~~g~~~~~~~~~~------~~Ng~~~s~d~~~l~~~dt----~--------~~~I~~~~~d~~~~~~~~~~  188 (295)
T d2ghsa1         129 AGSIYHV--AKGKVTKLFADIS------IPNSICFSPDGTTGYFVDT----K--------VNRLMRVPLDARTGLPTGKA  188 (295)
T ss_dssp             CEEEEEE--ETTEEEEEEEEES------SEEEEEECTTSCEEEEEET----T--------TCEEEEEEBCTTTCCBSSCC
T ss_pred             ceeEeee--cCCcEEEEeeccC------CcceeeecCCCceEEEeec----c--------cceeeEeeecccccccccce
Confidence            2345554  4576666655422      1347899999999886544    2        23688888754321000001


Q ss_pred             c---cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEe-cCCc
Q psy463          350 V---PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFS-TNVS  425 (790)
Q Consensus       350 ~---~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s-~dg~  425 (790)
                      .   .++.......+ ...+.+|. |++....+    ..|++++.++  .....+..       ......+++|- +|.+
T Consensus       189 ~~~~~~~~~~g~pdG-~~vD~~Gn-lWva~~~~----g~V~~~dp~G--~~~~~i~l-------P~~~~T~~~FGG~d~~  253 (295)
T d2ghsa1         189 EVFIDSTGIKGGMDG-SVCDAEGH-IWNARWGE----GAVDRYDTDG--NHIARYEV-------PGKQTTCPAFIGPDAS  253 (295)
T ss_dssp             EEEEECTTSSSEEEE-EEECTTSC-EEEEEETT----TEEEEECTTC--CEEEEEEC-------SCSBEEEEEEESTTSC
T ss_pred             EEEeccCcccccccc-eEEcCCCC-EEeeeeCC----CceEEecCCC--cEeeEecC-------CCCceEEEEEeCCCCC
Confidence            1   11111222233 67788887 55554433    4788888765  33333322       12245667775 7888


Q ss_pred             EEEEEeecC
Q psy463          426 YYVLSCIGP  434 (790)
Q Consensus       426 ~~~~~~~~~  434 (790)
                      .|+++....
T Consensus       254 ~LyvTta~~  262 (295)
T d2ghsa1         254 RLLVTSARE  262 (295)
T ss_dssp             EEEEEEBCT
T ss_pred             EEEEEECCc
Confidence            887765443

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.35  E-value=0.00018  Score=71.29  Aligned_cols=144  Identities=10%  Similarity=0.065  Sum_probs=87.4

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP  326 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~  326 (790)
                      .......+.+++.+++....+.   .+.++|+.++++...+...  ..   .....+|+|||+.|+ +.+    .+|   
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~d~---~v~i~d~~~~~~~~~~~~h--~~---~i~~v~~~p~~~~l~-s~s----~d~---  248 (340)
T d1tbga_         185 GDVMSLSLAPDTRLFVSGACDA---SAKLWDVREGMCRQTFTGH--ES---DINAICFFPNGNAFA-TGS----DDA---  248 (340)
T ss_dssp             SCEEEEEECTTSSEEEEEETTT---EEEEEETTTTEEEEEECCC--SS---CEEEEEECTTSSEEE-EEE----TTS---
T ss_pred             eeEeeeccccccceeEEeecCc---eEEEEECCCCcEEEEEeCC--CC---CeEEEEECCCCCEEE-EEe----CCC---
Confidence            3455667778887554443322   3888899888765443321  11   134689999999877 555    455   


Q ss_pred             cCcccEEEEEEcCCCCcccCCCccccc--CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeec
Q psy463          327 VDSWDHLTFIDLDDQAGIKDKVPVPLT--RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCD  404 (790)
Q Consensus       327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~  404 (790)
                           .|.++++...+     ....+.  .....+.. +.|+|+++.|+..+.++     .|+..++..  ++.....  
T Consensus       249 -----~i~~~~~~~~~-----~~~~~~~~~~~~~i~~-~~~s~~~~~l~~g~~dg-----~i~iwd~~~--~~~~~~~--  308 (340)
T d1tbga_         249 -----TCRLFDLRADQ-----ELMTYSHDNIICGITS-VSFSKSGRLLLAGYDDF-----NCNVWDALK--ADRAGVL--  308 (340)
T ss_dssp             -----CEEEEETTTTE-----EEEEECCTTCCSCEEE-EEECSSSCEEEEEETTS-----CEEEEETTT--CCEEEEE--
T ss_pred             -----eEEEEeecccc-----cccccccccccCceEE-EEECCCCCEEEEEECCC-----EEEEEECCC--CcEEEEE--
Confidence                 57888887654     122222  22223444 78999999777666553     455567655  3322111  


Q ss_pred             ccccCCCcccEEEEEEecCCcEEEEE
Q psy463          405 LLTSANQKCSYSGATFSTNVSYYVLS  430 (790)
Q Consensus       405 ~~~~~~~~~~~~~~~~s~dg~~~~~~  430 (790)
                          .+....+..+.|+||+++++..
T Consensus       309 ----~~H~~~V~~l~~s~d~~~l~s~  330 (340)
T d1tbga_         309 ----AGHDNRVSCLGVTDDGMAVATG  330 (340)
T ss_dssp             ----CCCSSCEEEEEECTTSSCEEEE
T ss_pred             ----cCCCCCEEEEEEeCCCCEEEEE
Confidence                1145678889999999987543

>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Acetylcholinesterase
species: Pacific electric ray (Torpedo californica) [TaxId: 7787]

Probab=98.34  E-value=2e-07  Score=100.85  Aligned_cols=131  Identities=20%  Similarity=0.273  Sum_probs=85.2

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      +..-++.|..    ..+++||||++|||.....-..... .....++++.+.+||.++||-.. .|.-.........|..
T Consensus        92 L~LnI~~P~~----~~~~lPV~v~ihGG~~~~g~~~~~~-~~~~~~~~~~~vvvVt~nYRlg~-~GFl~~~~~~~~~gN~  165 (532)
T d1ea5a_          92 LYLNIWVPSP----RPKSTTVMVWIYGGGFYSGSSTLDV-YNGKYLAYTEEVVLVSLSYRVGA-FGFLALHGSQEAPGNV  165 (532)
T ss_dssp             CEEEEEECSS----CCSSEEEEEEECCSTTTCCCTTCGG-GCTHHHHHHHTCEEEECCCCCHH-HHHCCCTTCSSSCSCH
T ss_pred             CEEEEEeCCC----CCCCCcEEEEEEcCCcccccCCccc-cCcchhhcccCccEEEEeecccc-ccccccccccCCCCcc
Confidence            4455677875    4567999999999876432111111 11233455679999999999421 2211101111223344


Q ss_pred             chhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCCC
Q psy463          563 EIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPVT  620 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~~  620 (790)
                      .+.|+..|++|+.++   +| -|+++|.|+|+|.||..+...+... ....|..+|+.++..
T Consensus       166 Gl~Dq~~AL~WV~~nI~~FG-GDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~  226 (532)
T d1ea5a_         166 GLLDQRMALQWVHDNIQFFG-GDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP  226 (532)
T ss_dssp             HHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred             cchhHHHHHHHHHHHHHhhc-CCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence            689999999999886   34 6889999999999999887766521 124788888877654

>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Mammalian carboxylesterase (liver carboxylesterase I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=3.9e-07  Score=98.65  Aligned_cols=130  Identities=22%  Similarity=0.338  Sum_probs=87.9

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      |..-++.|.+..  ..++.||||++|||.....-...+.   ...+++..+.+||.++||-.. .|.-.. .....-+..
T Consensus        97 L~LnI~~P~~~~--~~~~lPV~v~ihGG~~~~gs~~~~~---~~~~~~~~~vIvVt~nYRLg~-~GFl~~-~~~~~~gN~  169 (532)
T d2h7ca1          97 LYLNIYTPADLT--KKNRLPVMVWIHGGGLMVGAASTYD---GLALAAHENVVVVTIQYRLGI-WGFFST-GDEHSRGNW  169 (532)
T ss_dssp             CEEEEEECSCTT--SCCCEEEEEEECCSTTTSCCSTTSC---CHHHHHHHTCEEEEECCCCHH-HHHCCC-SSTTCCCCH
T ss_pred             CEEEEEECCCCC--CCCCcEEEEEEeCCcccccccccCC---chhhhhcCceEEEEEeeccCC-Cccccc-ccccccccc
Confidence            455567887654  5677999999999987543222221   234555689999999999421 221100 111122335


Q ss_pred             chhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCCC
Q psy463          563 EIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPVT  620 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~~  620 (790)
                      .+.|+..|++|+.++   +| -|+++|.|+|+|.||..+...+... ....|..+|+.++..
T Consensus       170 Gl~Dq~~AL~WV~~nI~~FG-GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~  230 (532)
T d2h7ca1         170 GHLDQVAALRWVQDNIASFG-GNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA  230 (532)
T ss_dssp             HHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred             ccHHHHHHHHHHHHHHHHhc-CCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence            689999999999876   34 6899999999999999887665531 234888888888754

>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Butyryl cholinesterase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=3.4e-07  Score=98.92  Aligned_cols=131  Identities=19%  Similarity=0.264  Sum_probs=84.7

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV  562 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~  562 (790)
                      |..-++.|..    ..++.||||++|||.....-....... ...++++.+.+||.++||-. -.|.-.........|..
T Consensus        90 L~lnI~~P~~----~~~~~PV~v~ihGG~~~~gs~~~~~~~-~~~~~~~~~vVvVt~nYRlg-~~Gfl~~~~~~~~~gN~  163 (526)
T d1p0ia_          90 LYLNVWIPAP----KPKNATVLIWIYGGGFQTGTSSLHVYD-GKFLARVERVIVVSMNYRVG-ALGFLALPGNPEAPGNM  163 (526)
T ss_dssp             CEEEEEEESS----CCSSEEEEEEECCSTTTSCCTTCGGGC-THHHHHHHCCEEEEECCCCH-HHHHCCCTTCTTSCSCH
T ss_pred             CEEEEEeCCC----CCCCCceEEEEECCCcccccCcccccC-ccccccccceeEEecccccc-cccccCCCCcccccccc
Confidence            4555677865    456789999999998754322222211 22344557999999999942 12211000111223445


Q ss_pred             chhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhc-CCCCceEEEEEeCCCC
Q psy463          563 EIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALAL-DPSNVFKCGISVAPVT  620 (790)
Q Consensus       563 ~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~-~p~~~~~~~v~~~~~~  620 (790)
                      .+.|+..|++|+.++   +| -|+++|.|+|+|.||..+...+.. .....|..+|+.++..
T Consensus       164 Gl~Dq~~AL~WV~~nI~~FG-GDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~  224 (526)
T d1p0ia_         164 GLFDQQLALQWVQKNIAAFG-GNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF  224 (526)
T ss_dssp             HHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred             cccchhhhhhhHHHHHHHhh-cCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence            689999999999876   34 688999999999999988665542 1234677777777643

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.27  E-value=0.00017  Score=70.25  Aligned_cols=230  Identities=10%  Similarity=0.056  Sum_probs=132.2

Q ss_pred             EeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEE
Q psy463          175 LAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNW  254 (790)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~w  254 (790)
                      ..||++.+. ++|+-.           ....|++++.++++....                        ..+.....+.+
T Consensus        23 p~wd~~~~~-l~wvDi-----------~~~~I~r~d~~~g~~~~~------------------------~~~~~~~~i~~   66 (295)
T d2ghsa1          23 PTFDPASGT-AWWFNI-----------LERELHELHLASGRKTVH------------------------ALPFMGSALAK   66 (295)
T ss_dssp             EEEETTTTE-EEEEEG-----------GGTEEEEEETTTTEEEEE------------------------ECSSCEEEEEE
T ss_pred             CeEECCCCE-EEEEEC-----------CCCEEEEEECCCCeEEEE------------------------ECCCCcEEEEE
Confidence            468887765 666543           126899999998763211                        12334567888


Q ss_pred             ccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEE
Q psy463          255 ANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLT  334 (790)
Q Consensus       255 spDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~  334 (790)
                      .+||++++....     .|+++|.++++.+.+.......... ...+....|+|+ |++.........+      ...+|
T Consensus        67 ~~dg~l~va~~~-----gl~~~d~~tg~~~~l~~~~~~~~~~-~~nd~~vd~~G~-iw~~~~~~~~~~~------~g~l~  133 (295)
T d2ghsa1          67 ISDSKQLIASDD-----GLFLRDTATGVLTLHAELESDLPGN-RSNDGRMHPSGA-LWIGTMGRKAETG------AGSIY  133 (295)
T ss_dssp             EETTEEEEEETT-----EEEEEETTTCCEEEEECSSTTCTTE-EEEEEEECTTSC-EEEEEEETTCCTT------CEEEE
T ss_pred             ecCCCEEEEEeC-----ccEEeecccceeeEEeeeecCCCcc-cceeeEECCCCC-EEEEecccccccc------ceeEe
Confidence            899995544432     2999999999888776543221111 134678899997 5544431111112      23566


Q ss_pred             EEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC----cceeeecccccCC
Q psy463          335 FIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT----PECITCDLLTSAN  410 (790)
Q Consensus       335 ~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~----~~~lt~~~~~~~~  410 (790)
                      .++  .++      .+.+..+ ......+.|++|++.+|+.....    ..||+++++...+.    ......    ..+
T Consensus       134 ~~~--~g~------~~~~~~~-~~~~Ng~~~s~d~~~l~~~dt~~----~~I~~~~~d~~~~~~~~~~~~~~~----~~~  196 (295)
T d2ghsa1         134 HVA--KGK------VTKLFAD-ISIPNSICFSPDGTTGYFVDTKV----NRLMRVPLDARTGLPTGKAEVFID----STG  196 (295)
T ss_dssp             EEE--TTE------EEEEEEE-ESSEEEEEECTTSCEEEEEETTT----CEEEEEEBCTTTCCBSSCCEEEEE----CTT
T ss_pred             eec--CCc------EEEEeec-cCCcceeeecCCCceEEEeeccc----ceeeEeeecccccccccceEEEec----cCc
Confidence            554  444      4444322 22233488999999999987653    57888887542111    111111    112


Q ss_pred             CcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEcCCCcEEE
Q psy463          411 QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQ  484 (790)
Q Consensus       411 ~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~  484 (790)
                      ..+......+..+|..++....+   ..|.+++.+++.+..+..           ....+....|-.+|+.+|.
T Consensus       197 ~~g~pdG~~vD~~GnlWva~~~~---g~V~~~dp~G~~~~~i~l-----------P~~~~T~~~FGG~d~~~Ly  256 (295)
T d2ghsa1         197 IKGGMDGSVCDAEGHIWNARWGE---GAVDRYDTDGNHIARYEV-----------PGKQTTCPAFIGPDASRLL  256 (295)
T ss_dssp             SSSEEEEEEECTTSCEEEEEETT---TEEEEECTTCCEEEEEEC-----------SCSBEEEEEEESTTSCEEE
T ss_pred             ccccccceEEcCCCCEEeeeeCC---CceEEecCCCcEeeEecC-----------CCCceEEEEEeCCCCCEEE
Confidence            34456677888888866554433   458888877766655432           1123455556555555544

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.21  E-value=0.00049  Score=67.83  Aligned_cols=255  Identities=10%  Similarity=0.067  Sum_probs=132.4

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..|+|.+||+ |+|+....+            .|++++.+++.     ....+....... +-++++++++  +|.....
T Consensus        43 EG~~~D~~G~-Ly~~D~~~g------------~I~ri~p~g~~-----~~~~~~~~~~~p-~gla~~~dG~--l~va~~~  101 (319)
T d2dg1a1          43 EGLNFDRQGQ-LFLLDVFEG------------NIFKINPETKE-----IKRPFVSHKANP-AAIKIHKDGR--LFVCYLG  101 (319)
T ss_dssp             EEEEECTTSC-EEEEETTTC------------EEEEECTTTCC-----EEEEEECSSSSE-EEEEECTTSC--EEEEECT
T ss_pred             EeCEECCCCC-EEEEECCCC------------EEEEEECCCCe-----EEEEEeCCCCCe-eEEEECCCCC--EEEEecC
Confidence            3579999997 777653222            79999887763     112111111111 2345666554  4443321


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEec---cC
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNR---VQ  268 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r---~~  268 (790)
                      . .      .....|+.++..++.....     +.               ..........+.+.|||++.+....   ..
T Consensus       102 ~-~------~~~~~i~~~~~~~~~~~~~-----~~---------------~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~  154 (319)
T d2dg1a1         102 D-F------KSTGGIFAATENGDNLQDI-----IE---------------DLSTAYCIDDMVFDSKGGFYFTDFRGYSTN  154 (319)
T ss_dssp             T-S------SSCCEEEEECTTSCSCEEE-----EC---------------SSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred             C-C------ccceeEEEEcCCCceeeee-----cc---------------CCCcccCCcceeEEeccceeeccccccccc
Confidence            1 0      0124567777666542111     00               0012233456889999994332211   12


Q ss_pred             cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCC
Q psy463          269 NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV  348 (790)
Q Consensus       269 ~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~  348 (790)
                      ....+++++.+++..+.+...-.      ....+.|||||+.|++.-+    .        ...|++++++....    .
T Consensus       155 ~~g~v~~~~~dg~~~~~~~~~~~------~pnGia~s~dg~~lyvad~----~--------~~~I~~~d~~~~g~----~  212 (319)
T d2dg1a1         155 PLGGVYYVSPDFRTVTPIIQNIS------VANGIALSTDEKVLWVTET----T--------ANRLHRIALEDDGV----T  212 (319)
T ss_dssp             CCEEEEEECTTSCCEEEEEEEES------SEEEEEECTTSSEEEEEEG----G--------GTEEEEEEECTTSS----S
T ss_pred             CcceeEEEecccceeEEEeeccc------eeeeeeeccccceEEEecc----c--------CCceEEEEEcCCCc----e
Confidence            34569999988887776655321      1236899999999885443    2        23789998754210    0


Q ss_pred             cccc------c-CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEe
Q psy463          349 PVPL------T-RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFS  421 (790)
Q Consensus       349 ~~~l------t-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s  421 (790)
                      ....      . .+.....+ ++.+.+|+ ||+....+    ..|.+++.++  .....+... ...++.......+.+.
T Consensus       213 ~~~~~~~~~~~~~~~~~PdG-l~vD~~G~-l~Va~~~~----g~V~~~~p~G--~~l~~i~~P-~~~~~~~~~~~~~~~~  283 (319)
T d2dg1a1         213 IQPFGATIPYYFTGHEGPDS-CCIDSDDN-LYVAMYGQ----GRVLVFNKRG--YPIGQILIP-GRDEGHMLRSTHPQFI  283 (319)
T ss_dssp             EEEEEEEEEEECCSSSEEEE-EEEBTTCC-EEEEEETT----TEEEEECTTS--CEEEEEECT-TGGGTCSCBCCEEEEC
T ss_pred             eccccceeeeccCCccceee-eeEcCCCC-EEEEEcCC----CEEEEECCCC--cEEEEEeCC-CcCCCcCceeeeEEEe
Confidence            1111      0 01111123 67888887 66655443    4788888655  222223210 0000112234567888


Q ss_pred             cCCcEEEEEeecCC---CCeEEEEecC
Q psy463          422 TNVSYYVLSCIGPG---IPEIMLFDKT  445 (790)
Q Consensus       422 ~dg~~~~~~~~~~~---~~~i~~~~~~  445 (790)
                      +++..++.+.....   ...||.++..
T Consensus       284 ~~~~~~~~t~~~~~~~~~g~l~~~~~~  310 (319)
T d2dg1a1         284 PGTNQLIICSNDIEMGGGSMLYTVNGF  310 (319)
T ss_dssp             TTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred             CCCCEEEEEcCCCCcCCceeEEEEeCC
Confidence            88776665543322   4457776653

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.21  E-value=8.1e-05  Score=74.06  Aligned_cols=164  Identities=10%  Similarity=0.075  Sum_probs=87.8

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ...+..+.|+|||+.++....+.+ ..+.+.+.+++++.....  +..   .......|+|+++.+++..+    .+|  
T Consensus       115 ~~~v~~v~~s~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~--~h~---~~v~~~~~~~~~~~~~~~~~----~d~--  182 (325)
T d1pgua1         115 AGPISDISWDFEGRRLCVVGEGRD-NFGVFISWDSGNSLGEVS--GHS---QRINACHLKQSRPMRSMTVG----DDG--  182 (325)
T ss_dssp             SSCEEEEEECTTSSEEEEEECCSS-CSEEEEETTTCCEEEECC--SCS---SCEEEEEECSSSSCEEEEEE----TTT--
T ss_pred             cCcEEEEEECCCCCccceeecccc-ceEEEEeecccccceeee--ecc---cccccccccccccceEEEee----ccc--
Confidence            345778999999995555443322 126666777776533322  111   11346889999998775565    455  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccc---cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-cee
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPL---TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECI  401 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~l---t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~l  401 (790)
                            .+.+++....+.     ...+   ......+.. ++|+||+..+++.+...    ..|...++..  ++. ..+
T Consensus       183 ------~v~~~d~~~~~~-----~~~~~~~~~~~~~v~~-v~~~pd~~~~l~s~~~d----~~i~iwd~~~--~~~~~~l  244 (325)
T d1pgua1         183 ------SVVFYQGPPFKF-----SASDRTHHKQGSFVRD-VEFSPDSGEFVITVGSD----RKISCFDGKS--GEFLKYI  244 (325)
T ss_dssp             ------EEEEEETTTBEE-----EEEECSSSCTTCCEEE-EEECSTTCCEEEEEETT----CCEEEEETTT--CCEEEEC
T ss_pred             ------cccccccccccc-----ceecccccCCCCccEE-eeeccccceeccccccc----cceeeeeecc--ccccccc
Confidence                  577788765441     1111   122223444 78999865555544432    2344556654  332 122


Q ss_pred             eecccccCCCcccEEEEEEe---cCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          402 TCDLLTSANQKCSYSGATFS---TNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       402 t~~~~~~~~~~~~~~~~~~s---~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      ..       ....+....|+   +||++++... .  -..|.++|+.+++.
T Consensus       245 ~~-------~~~~v~~~~~s~~~~dg~~l~s~s-~--D~~i~iwd~~~~~~  285 (325)
T d1pgua1         245 ED-------DQEPVQGGIFALSWLDSQKFATVG-A--DATIRVWDVTTSKC  285 (325)
T ss_dssp             CB-------TTBCCCSCEEEEEESSSSEEEEEE-T--TSEEEEEETTTTEE
T ss_pred             cc-------cccccccceeeeeccCCCEEEEEe-C--CCeEEEEECCCCCE
Confidence            11       11122222233   6788775543 2  23588888876543

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.18  E-value=0.0016  Score=61.83  Aligned_cols=230  Identities=9%  Similarity=0.020  Sum_probs=125.8

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|..+++++...........+..+ .....-+++|..++  .+|.+...          ...|++++++++..+.+    
T Consensus        11 ~I~~~~ld~~~~~~~~~~~~~~~~-~~~~~~ld~D~~~~--~iywsd~~----------~~~I~~~~l~g~~~~~v----   73 (263)
T d1npea_          11 KIERLPLERNTMKKTEAKAFLHIP-AKVIIGLAFDCVDK--VVYWTDIS----------EPSIGRASLHGGEPTTI----   73 (263)
T ss_dssp             EEEEEEESSSCBCGGGCEEEEEEE-EEEEEEEEEETTTT--EEEEEETT----------TTEEEEEESSSCCCEEE----
T ss_pred             eEEEEECCCccccccccccccccC-CCcEEEEEEEeCCC--EEEEEECC----------CCeEEEEEcccCCcEEE----
Confidence            788899876631100001111111 11112245676665  44544321          25899999988753222    


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR  303 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  303 (790)
                       +.                 ..-.....++...-++.++|++...  ..|.++++++..++.|......     .....+
T Consensus        74 -~~-----------------~~~~~p~~iAvD~~~~~lY~~d~~~--~~I~~~~~dg~~~~~l~~~~l~-----~p~~l~  128 (263)
T d1npea_          74 -IR-----------------QDLGSPEGIALDHLGRTIFWTDSQL--DRIEVAKMDGTQRRVLFDTGLV-----NPRGIV  128 (263)
T ss_dssp             -EC-----------------TTCCCEEEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECSSCS-----SEEEEE
T ss_pred             -EE-----------------eccccccEEEEeccCCeEEEeccCC--CEEEEEecCCceEEEEeccccc-----CCcEEE
Confidence             11                 1112233445544466777876543  3599999998877766543211     123677


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      ..|.+..++++..    ..+      ...|+++++++..      .+.+..........++.++.++.||+.....    
T Consensus       129 vdp~~g~ly~t~~----~~~------~~~I~r~~~dG~~------~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~----  188 (263)
T d1npea_         129 TDPVRGNLYWTDW----NRD------NPKIETSHMDGTN------RRILAQDNLGLPNGLTFDAFSSQLCWVDAGT----  188 (263)
T ss_dssp             EETTTTEEEEEEC----CSS------SCEEEEEETTSCC------CEEEECTTCSCEEEEEEETTTTEEEEEETTT----
T ss_pred             EecccCcEEEeec----CCC------CcEEEEecCCCCC------ceeeeeecccccceEEEeecCcEEEEEeCCC----
Confidence            8888887875433    112      3369999998775      4444433322223378899999999985442    


Q ss_pred             EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463          384 QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR  448 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~  448 (790)
                      ..|.++++++  ...+.+...       ...-..+  +-++.+++++..+  ...|++++..+++
T Consensus       189 ~~I~~~~~~g--~~~~~v~~~-------~~~P~~l--av~~~~lYwtd~~--~~~I~~~~~~~g~  240 (263)
T d1npea_         189 HRAECLNPAQ--PGRRKVLEG-------LQYPFAV--TSYGKNLYYTDWK--TNSVIAMDLAISK  240 (263)
T ss_dssp             TEEEEEETTE--EEEEEEEEC-------CCSEEEE--EEETTEEEEEETT--TTEEEEEETTTTE
T ss_pred             CEEEEEECCC--CCeEEEECC-------CCCcEEE--EEECCEEEEEECC--CCEEEEEECCCCc
Confidence            4788899877  344444332       1112233  3345666555322  3457777765543

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.17  E-value=0.00015  Score=75.23  Aligned_cols=268  Identities=13%  Similarity=0.121  Sum_probs=135.3

Q ss_pred             eeEeCCCCCceEEEEecCCc--eeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecc----------
Q psy463           12 ALWFSPSGNNLAYASFDDNR--TVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRV----------   79 (790)
Q Consensus        12 ~~~wSPDG~~iaf~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~----------   79 (790)
                      ...+||||+++||+....|.  ..++++.+..|+     ..+..  +.......+.|.+|+..++++...          
T Consensus       129 ~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~-----~~~~~--i~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~  201 (430)
T d1qfma1         129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK-----ELPDV--LERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE  201 (430)
T ss_dssp             EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE-----EEEEE--EEEECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred             ceEecCCCCEEEEEeccccCchheeEEeccCcce-----ecccc--cccccccceEEcCCCCEEEEEEeccccCcccccc
Confidence            45689999999998877764  678888888774     11111  111122456798888877665432          


Q ss_pred             ---cceeEEEEeeCCCC--eeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcC
Q psy463           80 ---QNRARITRCSINEG--TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA  154 (790)
Q Consensus        80 ---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~  154 (790)
                         +.-..+..+..-+.  ....++....+..|+   .....|+||+.+++........        ...+|..++....
T Consensus       202 ~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~---~~~~~s~d~~~l~i~~~~~~~~--------~~~~~~~d~~~~~  270 (430)
T d1qfma1         202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWM---GGAELSDDGRYVLLSIREGCDP--------VNRLWYCDLQQES  270 (430)
T ss_dssp             CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCE---EEEEECTTSCEEEEEEECSSSS--------CCEEEEEEGGGSS
T ss_pred             cccCCcceEEEEECCCCccccccccccccCCceE---EeeeccCCcceeeEEeeccCCc--------cEEEEEeeCCCcc
Confidence               11223444444332  222334333222232   1234588999877765433221        2378999876542


Q ss_pred             CccCCc--cee-ccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccc
Q psy463          155 GIKDKV--PVP-LTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT  231 (790)
Q Consensus       155 ~~~~~~--~~~-lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~  231 (790)
                      ......  ... +......... ...  .++  .+|+..+...       ....|..++++.....              
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~--~~~~~Tn~~a-------~~~~L~~~~~~~~~~~--------------  324 (430)
T d1qfma1         271 NGITGILKWVKLIDNFEGEYDY-VTN--EGT--VFTFKTNRHS-------PNYRLINIDFTDPEES--------------  324 (430)
T ss_dssp             SSSCSSCCCEEEECSSSSCEEE-EEE--ETT--EEEEEECTTC-------TTCEEEEEETTBCCGG--------------
T ss_pred             cccccccceeEeecccccceEE-Eec--CCc--eeecccCccc-------ccceeEEecCCCCccc--------------
Confidence            110000  011 1111111111 111  222  3333332211       2368888888764321              


Q ss_pred             eeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEE
Q psy463          232 VTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKM  311 (790)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i  311 (790)
                           .|.+.-+..+.....-..+..+..++...+.....+|.+++++++....+...+.  +.   ......+++...+
T Consensus       325 -----~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~~~~~~~~~~~~~--~s---v~~~~~~~~~~~~  394 (430)
T d1qfma1         325 -----KWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEV--GS---VVGYSGQKKDTEI  394 (430)
T ss_dssp             -----GCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCS--SE---EEEEECCTTCSEE
T ss_pred             -----cceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEEECCCCcEEEecCCCC--ce---EeeccCCCCCCEE
Confidence                 1111101222212222333444444445455567789999999998876654331  11   1233445677777


Q ss_pred             EEEEccccccCCCCCcCcccEEEEEEcCCCC
Q psy463          312 LLILSHNQESDGSTPVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       312 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~  342 (790)
                      .|..+   .-..      -..+|.+|+++++
T Consensus       395 ~~~~s---s~~t------P~~~y~~Dl~t~~  416 (430)
T d1qfma1         395 FYQFT---SFLS------PGIIYHCDLTKEE  416 (430)
T ss_dssp             EEEEE---CSSC------CCEEEEEETTSSS
T ss_pred             EEEEc---CCCC------CCeEEEEECCCCC
Confidence            76555   1222      4579999998876

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.16  E-value=0.00062  Score=70.28  Aligned_cols=268  Identities=14%  Similarity=0.124  Sum_probs=145.5

Q ss_pred             ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEE-EEEeeeccCCccEEEEecccC
Q psy463          115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT-EILAWDERENNPLLILSHNQE  193 (790)
Q Consensus       115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  193 (790)
                      .+||||++++|+.+..+..        +..|.++|+++++.    +...+.    .+. ....|.+++.. ++|.+....
T Consensus       131 ~~Spd~~~la~s~d~~G~e--------~~~l~v~Dl~tg~~----~~~~i~----~~~~~~~~W~~D~~~-~~Y~~~~~~  193 (430)
T d1qfma1         131 AFSEDGEYFAYGLSASGSD--------WVTIKFMKVDGAKE----LPDVLE----RVKFSCMAWTHDGKG-MFYNAYPQQ  193 (430)
T ss_dssp             EECTTSSEEEEEEEETTCS--------CEEEEEEETTTTEE----EEEEEE----EECSCCEEECTTSSE-EEEEECCCC
T ss_pred             EecCCCCEEEEEeccccCc--------hheeEEeccCccee----cccccc----cccccceEEcCCCCE-EEEEEeccc
Confidence            6799999999988655432        34899999998841    111121    111 23467776653 555553221


Q ss_pred             C---CCCC-CccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEE-Eecc-
Q psy463          194 S---DGST-PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAW-VNRV-  267 (790)
Q Consensus       194 ~---~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~-~~r~-  267 (790)
                      .   ++.. -..+...+|+-.+.+.....    ..+-            .+  .........+..|+||++++. .... 
T Consensus       194 ~~~~~~~~~~~~~~~~v~~h~lgt~~~~d----~~v~------------~e--~d~~~~~~~~~~s~d~~~l~i~~~~~~  255 (430)
T d1qfma1         194 DGKSDGTETSTNLHQKLYYHVLGTDQSED----ILCA------------EF--PDEPKWMGGAELSDDGRYVLLSIREGC  255 (430)
T ss_dssp             SSCCSSSCCCCCCCCEEEEEETTSCGGGC----EEEE------------CC--TTCTTCEEEEEECTTSCEEEEEEECSS
T ss_pred             cCcccccccccCCcceEEEEECCCCcccc----cccc------------cc--ccCCceEEeeeccCCcceeeEEeeccC
Confidence            1   1110 11344578887776654211    1111            11  023345667888999995443 3332 


Q ss_pred             CcceEEEEEECCCCce--------eEEEEEeCCCcccccCCce-eEccCCCEEEEEEccccccCCCCCcCcccEEEEEEc
Q psy463          268 QNRARITRCSINEGTC--------DVVFSRDLDRGWFEPFDHL-RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL  338 (790)
Q Consensus       268 ~~~~~i~~~~~~~g~~--------~~l~~~~~~~~~~~~~~~~-~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~  338 (790)
                      .....++.+++.....        ..+....        .... ....+|..+++...    .++.     ...|..+++
T Consensus       256 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~Tn----~~a~-----~~~L~~~~~  318 (430)
T d1qfma1         256 DPVNRLWYCDLQQESNGITGILKWVKLIDNF--------EGEYDYVTNEGTVFTFKTN----RHSP-----NYRLINIDF  318 (430)
T ss_dssp             SSCCEEEEEEGGGSSSSSCSSCCCEEEECSS--------SSCEEEEEEETTEEEEEEC----TTCT-----TCEEEEEET
T ss_pred             CccEEEEEeeCCCcccccccccceeEeeccc--------ccceEEEecCCceeecccC----cccc-----cceeEEecC
Confidence            3345688888764321        1222111        1111 12335666664444    3331     457999988


Q ss_pred             CCCCcccCCCccccc-CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEE
Q psy463          339 DDQAGIKDKVPVPLT-RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSG  417 (790)
Q Consensus       339 ~~~~~~~~~~~~~lt-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~  417 (790)
                      +.... .  ..+.|. ..+..+.. -..+..+..|++....+  ...+|+++++.+  ++...+...      ..+.+..
T Consensus       319 ~~~~~-~--~w~~vi~~~~~~~~~-~~~~~~~~~lvl~~~~~--~~~~l~v~~~~~--~~~~~~~~~------~~~sv~~  384 (430)
T d1qfma1         319 TDPEE-S--KWKVLVPEHEKDVLE-WVACVRSNFLVLCYLHD--VKNTLQLHDLAT--GALLKIFPL------EVGSVVG  384 (430)
T ss_dssp             TBCCG-G--GCEEEECCCSSCEEE-EEEEETTTEEEEEEEET--TEEEEEEEETTT--CCEEEEECC------CSSEEEE
T ss_pred             CCCcc-c--cceEEecccCcceee-eEEEEECCEEEEEEEcC--CEeEEEEEECCC--CcEEEecCC------CCceEee
Confidence            75430 0  012222 22332321 22334456677665552  237899999887  555444331      3345555


Q ss_pred             EEEecCCcEEEEEeecCC-CCeEEEEecCCCe
Q psy463          418 ATFSTNVSYYVLSCIGPG-IPEIMLFDKTGQR  448 (790)
Q Consensus       418 ~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~  448 (790)
                      .+.+++...+.+++++.. |+.+|.+|+++++
T Consensus       385 ~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~  416 (430)
T d1qfma1         385 YSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (430)
T ss_dssp             EECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             ccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence            566677788888888887 9999999998754

>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Acetylcholinesterase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.12  E-value=3.1e-06  Score=92.01  Aligned_cols=123  Identities=20%  Similarity=0.205  Sum_probs=79.0

Q ss_pred             CCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH------hhhhccCCccchhHHHHH
Q psy463          497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK------YAGYRRLGTVEIYDQINV  570 (790)
Q Consensus       497 ~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~------~~~~~~~~~~~~~D~~~~  570 (790)
                      ..+++||||++|||.....-....... ...++++.+.+||.++||-.. .|.-..      .......|...+.|+..|
T Consensus       135 ~~~~lPV~V~ihGG~f~~Gs~~~~~~~-~~~l~~~~~vVvVtinYRlg~-fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~A  212 (571)
T d1dx4a_         135 TTNGLPILIWIYGGGFMTGSATLDIYN-ADIMAAVGNVIVASFQYRVGA-FGFLHLAPEMPSEFAEEAPGNVGLWDQALA  212 (571)
T ss_dssp             CCSSEEEEEEECCSTTTCCCTTCGGGC-CHHHHHHHTCEEEEECCCCTH-HHHCCCGGGSCGGGTTSSCSCHHHHHHHHH
T ss_pred             CCCCCeEEEEEeCCCccCCCCcccccc-hhhhhhcCCeeEEeecceecc-ccccccccccccccccCCCCcccchHHHHH
Confidence            457899999999997643211111111 123444457999999999421 232100      011122344568999999


Q ss_pred             HHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCCCC
Q psy463          571 TRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPVTD  621 (790)
Q Consensus       571 ~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~~~  621 (790)
                      ++|+.++..  .-|+++|.|+|+|.||..+...+... ....|..+|+.++...
T Consensus       213 L~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~  266 (571)
T d1dx4a_         213 IRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN  266 (571)
T ss_dssp             HHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred             HHHHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence            999988522  16889999999999999887665532 2357888888777543

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.07  E-value=0.00018  Score=73.06  Aligned_cols=166  Identities=12%  Similarity=0.058  Sum_probs=92.7

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      ....+..++|||||++++....+.   .|.+++...++........  .   .......|++++..++ ..+    .+| 
T Consensus       120 ~~~~V~~l~~s~~~~~l~s~~~dg---~v~i~~~~~~~~~~~~~~h--~---~~v~~~~~~~~~~~~~-~~~----~~~-  185 (388)
T d1erja_         120 SDLYIRSVCFSPDGKFLATGAEDR---LIRIWDIENRKIVMILQGH--E---QDIYSLDYFPSGDKLV-SGS----GDR-  185 (388)
T ss_dssp             CCCBEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEEECCC--S---SCEEEEEECTTSSEEE-EEE----TTS-
T ss_pred             CCCCEEEEEECCCCCcceeccccc---ccccccccccccccccccc--c---cccccccccccccccc-ccc----cce-
Confidence            445678899999999666554433   2888888877655443211  1   1134688999999877 444    344 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeee
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITC  403 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~  403 (790)
                             .+.++|..+..      ................+.++++.|+..+.+     ..|+..+...  ++ ...+..
T Consensus       186 -------~i~~~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~--~~~~~~~~~  245 (388)
T d1erja_         186 -------TVRIWDLRTGQ------CSLTLSIEDGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSET--GFLVERLDS  245 (388)
T ss_dssp             -------EEEEEETTTTE------EEEEEECSSCEEEEEECSTTCCEEEEEETT-----SCEEEEETTT--CCEEEEEC-
T ss_pred             -------eeeeeeccccc------cccccccccccccccccCCCCCeEEEEcCC-----CeEEEeeccc--Cccceeecc
Confidence                   68888887654      222221211222223445577766665555     3455566654  22 112211


Q ss_pred             cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      ......+....+..+.|+|++++++....   -..+.++++...
T Consensus       246 ~~~~~~~h~~~v~~l~~s~~~~~l~s~~~---d~~i~iwd~~~~  286 (388)
T d1erja_         246 ENESGTGHKDSVYSVVFTRDGQSVVSGSL---DRSVKLWNLQNA  286 (388)
T ss_dssp             -----CCCSSCEEEEEECTTSSEEEEEET---TSEEEEEEC---
T ss_pred             ccccccCCCCCEEEEEECCCCCEEEEEEC---CCcEEEEeccCC
Confidence            10001113456788999999998865432   235777777543

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.07  E-value=0.00078  Score=65.38  Aligned_cols=161  Identities=13%  Similarity=0.169  Sum_probs=90.4

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      ..........|+|+++.++....+.   .+.+.++.++..........  .   ......|+|||+.|+ +.+    .+|
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~l~-~~~----~d~  165 (317)
T d1vyhc1          99 GHDHNVSSVSIMPNGDHIVSASRDK---TIKMWEVQTGYCVKTFTGHR--E---WVRMVRPNQDGTLIA-SCS----NDQ  165 (317)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTS---EEEEEETTTCCEEEEEECCS--S---CEEEEEECTTSSEEE-EEE----TTS
T ss_pred             cccccceeeeccCCCceEEeeccCc---ceeEeecccceeeeEEccCC--C---cceeeecccCCCEEE-EEe----CCC
Confidence            3345567889999999555544332   37788888887654443221  1   134678999999876 554    345


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCC--------------------CEEEEEEcCCCCce
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE--------------------NNVYFLSTQGSPIV  383 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg--------------------~~l~~~~~~~~~~~  383 (790)
                              .+.+++...++     ....+......+.. +.|+|++                    ..++..+.+     
T Consensus       166 --------~v~~~~~~~~~-----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----  226 (317)
T d1vyhc1         166 --------TVRVWVVATKE-----CKAELREHRHVVEC-ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD-----  226 (317)
T ss_dssp             --------CEEEEETTTCC-----EEEEECCCSSCEEE-EEECCSCGGGGGGGCCSCC-------CCEEEEEETT-----
T ss_pred             --------eEEEEeeccce-----eeEEEecCCCCceE-EEEeeccccceeeccccceeeeeccCCceeEeccCC-----
Confidence                    57778876655     12233322222222 4444443                    222222222     


Q ss_pred             EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463          384 QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ  447 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~  447 (790)
                      ..+...++..  ++  ++..    ..+....+..+.++|++++++....   -..|.++|+.++
T Consensus       227 ~~i~~~~~~~--~~--~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~  279 (317)
T d1vyhc1         227 KTIKMWDVST--GM--CLMT----LVGHDNWVRGVLFHSGGKFILSCAD---DKTLRVWDYKNK  279 (317)
T ss_dssp             SEEEEEETTT--TE--EEEE----EECCSSCEEEEEECSSSSCEEEEET---TTEEEEECCTTS
T ss_pred             CEEEEEECCC--Cc--EEEE----EeCCCCCEEEEEECCCCCEEEEEEC---CCeEEEEECCCC
Confidence            3455556654  32  2211    0113456778999999998865432   245888887654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=98.07  E-value=2.3e-05  Score=78.49  Aligned_cols=74  Identities=9%  Similarity=0.082  Sum_probs=50.9

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      ........++|++..++....+    .+.++|..+++.........      ....++|||||++|+ +..    .+|  
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~----~v~v~d~~~~~~~~~~~~~~------~~~~va~s~DG~~l~-v~~----~d~--  313 (346)
T d1jmxb_         251 TELYFTGLRSPKDPNQIYGVLN----RLAKYDLKQRKLIKAANLDH------TYYCVAFDKKGDKLY-LGG----TFN--  313 (346)
T ss_dssp             SSCEEEEEECSSCTTEEEEEES----EEEEEETTTTEEEEEEECSS------CCCEEEECSSSSCEE-EES----BSS--
T ss_pred             cceeEEEEEeCCCCEEEEecCC----eEEEEECCCCcEEEEEcCCC------CEEEEEEcCCCCEEE-EEe----CCC--
Confidence            4456678899998833333322    38899999987655443321      144799999999988 454    345  


Q ss_pred             CcCcccEEEEEEcCCCC
Q psy463          326 PVDSWDHLTFIDLDDQA  342 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~  342 (790)
                            .|.++|+++++
T Consensus       314 ------~v~v~D~~t~~  324 (346)
T d1jmxb_         314 ------DLAVFNPDTLE  324 (346)
T ss_dssp             ------EEEEEETTTTE
T ss_pred             ------cEEEEECccCC
Confidence                  69999998876

>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Bile-salt activated lipase (cholesterol esterase)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.05  E-value=1.9e-06  Score=93.91  Aligned_cols=133  Identities=20%  Similarity=0.307  Sum_probs=83.7

Q ss_pred             EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccc--cccc--h-HHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463          483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTER--FSVD--W-NLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR  557 (790)
Q Consensus       483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~--~~~~--~-~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~  557 (790)
                      |+.-++.|.... ..++++||||++|||.....-...  +...  + ...+++..+.+||.++||-. -.|.-. .....
T Consensus        81 L~LNI~~P~~~~-~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg-~~GFl~-~~~~~  157 (579)
T d2bcea_          81 LYLNIWVPQGRK-EVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVG-PLGFLS-TGDSN  157 (579)
T ss_dssp             CEEEEEEEECSS-SCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCH-HHHHCC-CSSTT
T ss_pred             CEEEEEECCCCC-CCCCCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeeccccc-cccccc-ccccC
Confidence            455567776432 034679999999998764221111  1111  1 12344545799999999942 122110 01112


Q ss_pred             cCCccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhc-CCCCceEEEEEeCCC
Q psy463          558 RLGTVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALAL-DPSNVFKCGISVAPV  619 (790)
Q Consensus       558 ~~~~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~-~p~~~~~~~v~~~~~  619 (790)
                      ..+...+.|+..|++|+.++   +| -|+++|.|+|+|.||..+...+.. .....|..+|+.++.
T Consensus       158 ~~gN~Gl~Dq~~AL~WV~~nI~~FG-GDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs  222 (579)
T d2bcea_         158 LPGNYGLWDQHMAIAWVKRNIEAFG-GDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV  222 (579)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred             CCccchhhHHHHHHHHHhhhhhhhc-cCcCceEeeecccccchhhhhhhhhcccCccccceeccCC
Confidence            22445689999999999886   34 688999999999999988765542 123588888888864

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.02  E-value=0.00086  Score=65.78  Aligned_cols=116  Identities=9%  Similarity=0.135  Sum_probs=64.7

Q ss_pred             EEEEccCCc----EEEEEeccCcceEEEEEECCC-Cce--eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463          251 RVNWANESV----VAAWVNRVQNRARITRCSINE-GTC--DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG  323 (790)
Q Consensus       251 ~~~wspDg~----~~~~~~r~~~~~~i~~~~~~~-g~~--~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g  323 (790)
                      .++|+||++    .+++++...  ..|+++++.. +..  +.+........- ......++.+||+ |+ ++.     .+
T Consensus       176 Gi~~~~d~d~~~~~lyv~d~~~--~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~pdGiavD~~Gn-ly-Va~-----~~  245 (314)
T d1pjxa_         176 GIAVRHMNDGRPYQLIVAETPT--KKLWSYDIKGPAKIENKKVWGHIPGTHE-GGADGMDFDEDNN-LL-VAN-----WG  245 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEETTT--TEEEEEEEEETTEEEEEEEEEECCCCSS-CEEEEEEEBTTCC-EE-EEE-----ET
T ss_pred             eeEECCCCCcceeEEEEEeecc--cceEEeeccCccccceeeEEEEcccccc-ccceeeEEecCCc-EE-EEE-----cC
Confidence            568898764    455554332  3477776543 322  122221110000 0012567888887 54 332     12


Q ss_pred             CCCcCcccEEEEEEcCCCCcccCCCcc-cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          324 STPVDSWDHLTFIDLDDQAGIKDKVPV-PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~-~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                            ...|+++|.++++      .. .+......... ++|.||+++||++....    ..||++++.-
T Consensus       246 ------~g~I~~~dp~~g~------~~~~i~~p~~~~t~-~afg~d~~~lyVt~~~~----g~i~~~~~~~  299 (314)
T d1pjxa_         246 ------SSHIEVFGPDGGQ------PKMRIRCPFEKPSN-LHFKPQTKTIFVTEHEN----NAVWKFEWQR  299 (314)
T ss_dssp             ------TTEEEEECTTCBS------CSEEEECSSSCEEE-EEECTTSSEEEEEETTT----TEEEEEECSS
T ss_pred             ------CCEEEEEeCCCCE------EEEEEECCCCCEEE-EEEeCCCCEEEEEECCC----CcEEEEECCC
Confidence                  2379999988876      32 23322222333 78999999998877653    4899998765

>d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases
domain: Erythromycin polyketide synthase
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.01  E-value=7e-05  Score=71.40  Aligned_cols=101  Identities=9%  Similarity=-0.108  Sum_probs=58.6

Q ss_pred             CCccEEEEEcCCC--CccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHH-HHHH
Q psy463          499 KKYPLLIHVYGGP--SSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVT-RYLQ  575 (790)
Q Consensus       499 ~~~p~vv~~HG~~--~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~  575 (790)
                      ...|.||++||..  ++.     +.+.-....+. ..+.|+.++.+|.+.. ...         ...++++.+.+ +.+.
T Consensus        40 ~~~~~l~c~~~~~~gg~~-----~~y~~La~~L~-~~~~V~al~~pG~~~~-e~~---------~~s~~~~a~~~~~~i~  103 (255)
T d1mo2a_          40 PGEVTVICCAGTAAISGP-----HEFTRLAGALR-GIAPVRAVPQPGYEEG-EPL---------PSSMAAVAAVQADAVI  103 (255)
T ss_dssp             SCSSEEEEECCCSSSCSG-----GGGHHHHHHHT-TTCCEEEECCTTSSTT-CCE---------ESSHHHHHHHHHHHHH
T ss_pred             CCCCeEEEECCCCCCCCH-----HHHHHHHHhcC-CCceEEEEeCCCcCCC-CCC---------CCCHHHHHHHHHHHHH
Confidence            3457899999732  221     11212223343 3578999999986532 111         12355555533 3444


Q ss_pred             HhCCCcCCCceEEEEechHHHHHHHHHhcCC--CCceEEEEEeCC
Q psy463          576 ENLPYIDKTRTAIWGWSYGGYATGLALALDP--SNVFKCGISVAP  618 (790)
Q Consensus       576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p--~~~~~~~v~~~~  618 (790)
                      +..   ...++.|+||||||.++..+|.+.+  ...+..++++.+
T Consensus       104 ~~~---~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~  145 (255)
T d1mo2a_         104 RTQ---GDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDV  145 (255)
T ss_dssp             HTT---SSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEEC
T ss_pred             HhC---CCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECC
Confidence            422   2467999999999999998886533  123455555544

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=0.002  Score=61.23  Aligned_cols=228  Identities=11%  Similarity=0.030  Sum_probs=123.9

Q ss_pred             EEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCc
Q psy463          144 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV  223 (790)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  223 (790)
                      .|.++++++..      ...+..+...+.. +.+|..++  .+|.+...          ...|++.++++......  ..
T Consensus        11 ~I~~~~l~~~~------~~~~~~~~~~~~~-id~d~~~~--~lYw~D~~----------~~~I~~~~l~~~~~~~~--~~   69 (266)
T d1ijqa1          11 EVRKMTLDRSE------YTSLIPNLRNVVA-LDTEVASN--RIYWSDLS----------QRMICSTQLDRAHGVSS--YD   69 (266)
T ss_dssp             SEEEEETTSCC------CEEEECSCSSEEE-EEEETTTT--EEEEEETT----------TTEEEEEEC----------CE
T ss_pred             eEEEEECCCCc------ceeeeCCCCceEE-EEEEeCCC--EEEEEECC----------CCEEEEEEecCCCCCcc--eE
Confidence            68889998763      2333333223332 46677665  34444321          15788888765321100  11


Q ss_pred             cccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCcee
Q psy463          224 PLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLR  303 (790)
Q Consensus       224 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~  303 (790)
                      .+..                ........++.-+-++.++|++...+  .|.++++++..++.+.......     ....+
T Consensus        70 ~~~~----------------~~~~~p~glAvD~~~~~lY~~d~~~~--~I~v~~~~g~~~~~~~~~~~~~-----P~~l~  126 (266)
T d1ijqa1          70 TVIS----------------RDIQAPDGLAVDWIHSNIYWTDSVLG--TVSVADTKGVKRKTLFRENGSK-----PRAIV  126 (266)
T ss_dssp             EEEC----------------SSCSCCCEEEEETTTTEEEEEETTTT--EEEEEETTSSSEEEEEECTTCC-----EEEEE
T ss_pred             EEEe----------------CCCCCcceEEEeeccceEEEEecCCC--EEEeEecCCceEEEEEcCCCCC-----cceEE
Confidence            1110                11112234555556777888876433  5999999988777666543211     23567


Q ss_pred             EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCce
Q psy463          304 FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIV  383 (790)
Q Consensus       304 ~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  383 (790)
                      ..|....|+++-.     ..      ...|++.++++..      .+.|..........+++++.+++||+.....    
T Consensus       127 vd~~~g~ly~~~~-----~~------~~~I~r~~~dGs~------~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~----  185 (266)
T d1ijqa1         127 VDPVHGFMYWTDW-----GT------PAKIKKGGLNGVD------IYSLVTENIQWPNGITLDLLSGRLYWVDSKL----  185 (266)
T ss_dssp             EETTTTEEEEEEC-----SS------SCEEEEEETTSCC------EEEEECSSCSCEEEEEEETTTTEEEEEETTT----
T ss_pred             EEcccCeEEEecc-----CC------CcceeEeccCCCc------eecccccccceeeEEEeeccccEEEEecCCc----
Confidence            7887766764332     11      3479999998876      5555433222223388999999999986543    


Q ss_pred             EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463          384 QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       384 ~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      ..|.++++++  ...+.+...      ......-..++.++.+|+++..  ....|+.++..+
T Consensus       186 ~~I~~~~~dG--~~~~~~~~~------~~~~~~p~~lav~~~~ly~td~--~~~~I~~~~~~~  238 (266)
T d1ijqa1         186 HSISSIDVNG--GNRKTILED------EKRLAHPFSLAVFEDKVFWTDI--INEAIFSANRLT  238 (266)
T ss_dssp             TEEEEEETTS--CSCEEEEEC------TTTTSSEEEEEEETTEEEEEET--TTTEEEEEETTT
T ss_pred             CEEEEEECCC--CCEEEEEeC------CCcccccEEEEEECCEEEEEEC--CCCeEEEEECCC
Confidence            4799999987  343343331      1111112234455666665532  234677776544

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=97.97  E-value=0.0013  Score=64.10  Aligned_cols=237  Identities=13%  Similarity=0.073  Sum_probs=120.3

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN  191 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (790)
                      ..++++|||+ |+++.....            .||+++.++..       ..+......+.. ++++++++  ++.....
T Consensus        31 e~iAv~pdG~-l~vt~~~~~------------~I~~i~p~g~~-------~~~~~~~~~~~g-la~~~dG~--l~v~~~~   87 (302)
T d2p4oa1          31 ENLASAPDGT-IFVTNHEVG------------EIVSITPDGNQ-------QIHATVEGKVSG-LAFTSNGD--LVATGWN   87 (302)
T ss_dssp             EEEEECTTSC-EEEEETTTT------------EEEEECTTCCE-------EEEEECSSEEEE-EEECTTSC--EEEEEEC
T ss_pred             CCEEECCCCC-EEEEeCCCC------------EEEEEeCCCCE-------EEEEcCCCCcce-EEEcCCCC--eEEEecC
Confidence            3568899997 565543222            89999876542       222222223332 46677654  4443321


Q ss_pred             cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463          192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA  271 (790)
Q Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~  271 (790)
                                 ...|+++++.+....    ...+..               .........+.+.+||++++...   ...
T Consensus        88 -----------~~~~~~~~~~~~~~~----~~~~~~---------------~~~~~~~n~i~~~~~g~~~v~~~---~~~  134 (302)
T d2p4oa1          88 -----------ADSIPVVSLVKSDGT----VETLLT---------------LPDAIFLNGITPLSDTQYLTADS---YRG  134 (302)
T ss_dssp             -----------TTSCEEEEEECTTSC----EEEEEE---------------CTTCSCEEEEEESSSSEEEEEET---TTT
T ss_pred             -----------CceEEEEEecccccc----eeeccc---------------cCCccccceeEEccCCCEEeecc---ccc
Confidence                       145666665543211    111110               01223356778899998433222   223


Q ss_pred             EEEEEECCCCceeEEEEEeCCC--cccc-cCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCC
Q psy463          272 RITRCSINEGTCDVVFSRDLDR--GWFE-PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV  348 (790)
Q Consensus       272 ~i~~~~~~~g~~~~l~~~~~~~--~~~~-~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~  348 (790)
                      .++.++..++............  .+.. ....-..++|+..+++..+      +      ...|++++.++.....  .
T Consensus       135 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~------~------~~~i~~~~~~~~~~~~--~  200 (302)
T d2p4oa1         135 AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT------E------KMLLLRIPVDSTDKPG--E  200 (302)
T ss_dssp             EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET------T------TTEEEEEEBCTTSCBC--C
T ss_pred             cceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeeecC------C------CCeEEecccccccccc--c
Confidence            4899999887655443321100  0000 0112234557777775433      2      3479999987543100  0


Q ss_pred             cccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEE---ecCCc
Q psy463          349 PVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATF---STNVS  425 (790)
Q Consensus       349 ~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~---s~dg~  425 (790)
                      ......+. ...+ +++++||+ ||+....+    ..|++++.++   +...+...    ..+......+.|   ++|++
T Consensus       201 ~~~~~~~~-~pdg-ia~d~dG~-l~va~~~~----~~V~~i~p~G---~~~~~~~~----~~~~~~pt~vafg~~~~D~~  266 (302)
T d2p4oa1         201 PEIFVEQT-NIDD-FAFDVEGN-LYGATHIY----NSVVRIAPDR---STTIIAQA----EQGVIGSTAVAFGQTEGDCT  266 (302)
T ss_dssp             CEEEEESC-CCSS-EEEBTTCC-EEEECBTT----CCEEEECTTC---CEEEEECG----GGTCTTEEEEEECCSTTTTT
T ss_pred             cccccCCC-CCcc-eEECCCCC-EEEEEcCC----CcEEEECCCC---CEEEEEec----CCCCCCceEEEEcCCCCCCC
Confidence            11111111 1122 78899997 66665543    4688887765   33222211    002234567788   67888


Q ss_pred             EEEEEee
Q psy463          426 YYVLSCI  432 (790)
Q Consensus       426 ~~~~~~~  432 (790)
                      .++++.+
T Consensus       267 ~Lyvtt~  273 (302)
T d2p4oa1         267 AIYVVTN  273 (302)
T ss_dssp             EEEEEEC
T ss_pred             EEEEECC
Confidence            8876644

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.97  E-value=0.0014  Score=64.09  Aligned_cols=258  Identities=12%  Similarity=0.046  Sum_probs=128.4

Q ss_pred             CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccc--cceEEEEEEeeeccCCccEEEEe
Q psy463          112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR--GRFTVTEILAWDERENNPLLILS  189 (790)
Q Consensus       112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~--~~~~~~~~~~~~~~~~~~~~~~~  189 (790)
                      ..|+|.|||+ |++++.......     .....|++++.+++..    .......  .....-.-+.++++++  ++|+.
T Consensus        21 EGpa~d~dG~-ly~~~~~~~~~~-----~~~g~I~r~d~~~~~~----~~~~~~~~~~~~g~P~Gl~~~~dg~--~l~va   88 (314)
T d1pjxa_          21 EGPVFDKNGD-FYIVAPEVEVNG-----KPAGEILRIDLKTGKK----TVICKPEVNGYGGIPAGCQCDRDAN--QLFVA   88 (314)
T ss_dssp             EEEEECTTSC-EEEEETTCEETT-----EECCEEEEECTTTCCE----EEEECCEETTEECCEEEEEECSSSS--EEEEE
T ss_pred             eEeEEeCCCC-EEEEECcccccc-----ccCCEEEEEECCCCcE----EEEECCccccCCCcceeEEEeCCCC--EEEEE
Confidence            3579999997 666543221100     0123699999887741    0111000  0001123356666665  45554


Q ss_pred             cccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEecc--
Q psy463          190 HNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRV--  267 (790)
Q Consensus       190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~--  267 (790)
                      ..           ...|.+++.+++.....   .....|               ........+.+.|||++.+.....  
T Consensus        89 d~-----------~~~i~~~~~~g~~~~~~---~~~~~g---------------~~~~~pndl~~d~~G~lyvtd~~~~~  139 (314)
T d1pjxa_          89 DM-----------RLGLLVVQTDGTFEEIA---KKDSEG---------------RRMQGCNDCAFDYEGNLWITAPAGEV  139 (314)
T ss_dssp             ET-----------TTEEEEEETTSCEEECC---SBCTTS---------------CBCBCCCEEEECTTSCEEEEECBCBC
T ss_pred             EC-----------CCeEEEEeCCCcEEEEE---eccccc---------------cccCCCcEEEECCCCCEEEecCccCc
Confidence            31           14688888877542111   000000               000112356789999843322110  


Q ss_pred             ----------CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCC----EEEEEEccccccCCCCCcCcccEE
Q psy463          268 ----------QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGK----KMLLILSHNQESDGSTPVDSWDHL  333 (790)
Q Consensus       268 ----------~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~----~i~~~~~~~~~~~g~~~~~~~~~l  333 (790)
                                .....+|+++.++. ...+.....      ......|+||++    .|++.-+      +      ...|
T Consensus       140 ~~~~~~~~~~~~~G~v~~~~~dg~-~~~~~~~~~------~pNGi~~~~d~d~~~~~lyv~d~------~------~~~i  200 (314)
T d1pjxa_         140 APADYTRSMQEKFGSIYCFTTDGQ-MIQVDTAFQ------FPNGIAVRHMNDGRPYQLIVAET------P------TKKL  200 (314)
T ss_dssp             TTSCCCBTTSSSCEEEEEECTTSC-EEEEEEEES------SEEEEEEEECTTSCEEEEEEEET------T------TTEE
T ss_pred             ccccccceeccCCceEEEEeecCc-eeEeeCCcc------eeeeeEECCCCCcceeEEEEEee------c------ccce
Confidence                      11236888887653 444433211      023578999875    4543222      2      3478


Q ss_pred             EEEEcCCCCcccCCC-cccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce-eeecccccCCC
Q psy463          334 TFIDLDDQAGIKDKV-PVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC-ITCDLLTSANQ  411 (790)
Q Consensus       334 ~~~d~~~~~~~~~~~-~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~-lt~~~~~~~~~  411 (790)
                      ++++++......+.. ...+.........-++++.+|+ ||+.....    ..|++++.++  ++... +..       .
T Consensus       201 ~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~Gn-lyVa~~~~----g~I~~~dp~~--g~~~~~i~~-------p  266 (314)
T d1pjxa_         201 WSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGS----SHIEVFGPDG--GQPKMRIRC-------P  266 (314)
T ss_dssp             EEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETT----TEEEEECTTC--BSCSEEEEC-------S
T ss_pred             EEeeccCccccceeeEEEEccccccccceeeEEecCCc-EEEEEcCC----CEEEEEeCCC--CEEEEEEEC-------C
Confidence            888875322000000 0011111111122267889987 66554333    4789998876  44332 222       2


Q ss_pred             cccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463          412 KCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT  445 (790)
Q Consensus       412 ~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~  445 (790)
                      .....+++|.+|++.++.+...  ...|+.+++.
T Consensus       267 ~~~~t~~afg~d~~~lyVt~~~--~g~i~~~~~~  298 (314)
T d1pjxa_         267 FEKPSNLHFKPQTKTIFVTEHE--NNAVWKFEWQ  298 (314)
T ss_dssp             SSCEEEEEECTTSSEEEEEETT--TTEEEEEECS
T ss_pred             CCCEEEEEEeCCCCEEEEEECC--CCcEEEEECC
Confidence            2355678999999877665432  3467777764

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.93  E-value=0.0005  Score=67.67  Aligned_cols=29  Identities=21%  Similarity=0.149  Sum_probs=23.2

Q ss_pred             CceeEeCCCCCceEEEEecCCceeEEEecc
Q psy463           10 SSALWFSPSGNNLAYASFDDNRTVIMTIPF   39 (790)
Q Consensus        10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~   39 (790)
                      ..++.|||||++||-.+ .|+.+.+|.+..
T Consensus        14 I~~l~fsp~~~~L~s~s-~Dg~v~iwd~~~   42 (342)
T d1yfqa_          14 ISDIKIIPSKSLLLITS-WDGSLTVYKFDI   42 (342)
T ss_dssp             EEEEEEEGGGTEEEEEE-TTSEEEEEEEET
T ss_pred             EEEEEEeCCCCEEEEEE-CCCeEEEEEccC
Confidence            37889999999998765 577788887765

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.92  E-value=0.0031  Score=62.16  Aligned_cols=154  Identities=11%  Similarity=0.127  Sum_probs=83.0

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS  324 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~  324 (790)
                      .........|+|+++.+.....+.   .|.+++..++.........  ..   ......|  +++.|+ +.+    .+| 
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~d~---~i~i~d~~~~~~~~~~~~h--~~---~v~~~~~--~~~~l~-~~~----~dg-  263 (355)
T d1nexb2         200 HTDRIYSTIYDHERKRCISASMDT---TIRIWDLENGELMYTLQGH--TA---LVGLLRL--SDKFLV-SAA----ADG-  263 (355)
T ss_dssp             CSSCEEEEEEETTTTEEEEEETTS---CEEEEETTTCCEEEEECCC--SS---CCCEEEE--CSSEEE-EEC----TTS-
T ss_pred             cccccccccccccceeeecccccc---eEEeeeccccccccccccc--cc---ccccccc--ccceee-eee----ccc-
Confidence            345567889999999555544432   2888999888765443321  11   1334555  456665 555    456 


Q ss_pred             CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeec
Q psy463          325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCD  404 (790)
Q Consensus       325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~  404 (790)
                             .|.++|+.+..      . .+..+...+.....++++++ ++..+.+     ..|...++.+  ++.  +...
T Consensus       264 -------~i~iwd~~~~~------~-~~~~~~~~~~~~~~~~~~~~-~l~~g~d-----~~i~vwd~~t--g~~--~~~~  319 (355)
T d1nexb2         264 -------SIRGWDANDYS------R-KFSYHHTNLSAITTFYVSDN-ILVSGSE-----NQFNIYNLRS--GKL--VHAN  319 (355)
T ss_dssp             -------EEEEEETTTCC------E-EEEEECTTCCCCCEEEECSS-EEEEEET-----TEEEEEETTT--CCB--CCSC
T ss_pred             -------ccccccccccc------e-ecccccCCceEEEEEcCCCC-EEEEEeC-----CEEEEEECCC--CCE--EEEE
Confidence                   68889987654      2 22211112222244667776 4444444     3566667765  432  2110


Q ss_pred             ccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEe
Q psy463          405 LLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFD  443 (790)
Q Consensus       405 ~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~  443 (790)
                         ..+....+..++|+|+  .++++.+..+.-.|+++|
T Consensus       320 ---~~~~~~~V~~v~~~~~--~~~~~~s~dg~~~l~~~d  353 (355)
T d1nexb2         320 ---ILKDADQIWSVNFKGK--TLVAAVEKDGQSFLEILD  353 (355)
T ss_dssp             ---TTTTCSEEEEEEEETT--EEEEEEESSSCEEEEEEE
T ss_pred             ---ecCCCCCEEEEEEcCC--eEEEEEECCCcEEEEEEe
Confidence               1114456778889876  354554444322355544

>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Pancreatic lipase, N-terminal domain
domain: Pancreatic lipase, N-terminal domain
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=97.91  E-value=1.1e-05  Score=78.50  Aligned_cols=113  Identities=13%  Similarity=0.079  Sum_probs=74.2

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ...|+++++||..++.  ...|.......++...++.|+++|.+.....  .+..+....  ......+...+++|..+.
T Consensus        68 ~~~pt~iiiHGw~~~~--~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~--~Y~~a~~n~--~~Vg~~ia~~i~~l~~~~  141 (337)
T d1rp1a2          68 TDKKTRFIIHGFIDKG--EENWLLDMCKNMFKVEEVNCICVDWKKGSQT--SYTQAANNV--RVVGAQVAQMLSMLSANY  141 (337)
T ss_dssp             TTSEEEEEECCCCCTT--CTTHHHHHHHHHTTTCCEEEEEEECHHHHSS--CHHHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcCCC--CcchHHHHHHHHHhcCCceEEEEeeccccCc--chHHHHHHH--HHHHHHHHHHHHHHHHhc
Confidence            4568999999997763  3445555566677767899999998642211  111111100  012355566777776634


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT  620 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~  620 (790)
                      + ++.+++.|+|||+||.+|..+..+- . .+..++...|..
T Consensus       142 g-~~~~~vhlIGhSLGAhvAG~aG~~~-~-~l~rItgLDPA~  180 (337)
T d1rp1a2         142 S-YSPSQVQLIGHSLGAHVAGEAGSRT-P-GLGRITGLDPVE  180 (337)
T ss_dssp             C-CCGGGEEEEEETHHHHHHHHHHHTS-T-TCCEEEEESCCC
T ss_pred             C-CChhheEEEeecHHHhhhHHHHHhh-c-cccceeccCCCc
Confidence            4 7889999999999999998777643 3 566777777653

>d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Human 'protective protein', HPP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=0.00015  Score=75.77  Aligned_cols=147  Identities=13%  Similarity=0.107  Sum_probs=87.5

Q ss_pred             eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc-------------hHHHHHhcCCeEE
Q psy463          470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-------------WNLYLADNKDIVV  536 (790)
Q Consensus       470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-------------~~~~~~~~~G~~v  536 (790)
                      ...-.+...++..+..|.+...+    .....|+++++-||||+..+...+...             ....-.. .-..+
T Consensus        21 ~ysGyl~~~~~~~lffw~~~s~~----~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~-~~anl   95 (452)
T d1ivya_          21 QYSGYLKSSGSKHLHYWFVESQK----DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWN-LIANV   95 (452)
T ss_dssp             EEEEEEECSTTEEEEEEEECCSS----CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGG-GSSEE
T ss_pred             ceeeeeecCCCceEEEEEEEcCC----CCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchh-cccCE
Confidence            44455667678889988886543    235679999999999985432111100             0001111 12468


Q ss_pred             EEEcCC-CCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc---CCCCceEE
Q psy463          537 AYIDGR-NSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL---DPSNVFKC  612 (790)
Q Consensus       537 ~~~d~r-G~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~---~p~~~~~~  612 (790)
                      +.+|.+ |.|.+-.. . .....-......|+..++..+.+.++.....++.|+|-||||.-+..++..   .+.-.+++
T Consensus        96 lfIDqPvGtGfS~~~-~-~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~G  173 (452)
T d1ivya_          96 LYLESPAGVGFSYSD-D-KFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQG  173 (452)
T ss_dssp             EEECCSTTSTTCEES-S-CCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEE
T ss_pred             EEEecCCCcccccCC-C-CCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccc
Confidence            999964 76643111 0 000000012345555555444444776767799999999999877666532   34446899


Q ss_pred             EEEeCCCCCcc
Q psy463          613 GISVAPVTDWI  623 (790)
Q Consensus       613 ~v~~~~~~~~~  623 (790)
                      ++.++|+.+..
T Consensus       174 i~igng~~d~~  184 (452)
T d1ivya_         174 LAVGNGLSSYE  184 (452)
T ss_dssp             EEEESCCSBHH
T ss_pred             eEcCCCccCch
Confidence            99999998754

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=97.78  E-value=0.0027  Score=63.63  Aligned_cols=66  Identities=9%  Similarity=-0.023  Sum_probs=37.1

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcc---eEEEEEECC-CCceeEEEE-E--eCCCcccccCCceeEcc-CCCEEEEEEc
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNR---ARITRCSIN-EGTCDVVFS-R--DLDRGWFEPFDHLRFSS-DGKKMLLILS  316 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~---~~i~~~~~~-~g~~~~l~~-~--~~~~~~~~~~~~~~~sp-Dg~~i~~~~~  316 (790)
                      .....+.+||||++++.++|+.+.   ..|...... .+....+.. .  .....|   ...+.++| ||++|+ ++.
T Consensus       255 ~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~---p~~i~~~p~~G~~l~-va~  328 (365)
T d1jofa_         255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGH---SNAVSPCPWSDEWMA-ITD  328 (365)
T ss_dssp             EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTT---CCCEEECTTCTTEEE-EEC
T ss_pred             CCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCC---ccEEEecCCCCCEEE-EEe
Confidence            344578899999988888886543   123333332 233332221 1  111112   23688998 899887 454

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=0.0059  Score=59.57  Aligned_cols=158  Identities=8%  Similarity=-0.011  Sum_probs=85.4

Q ss_pred             EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463          251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW  330 (790)
Q Consensus       251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~  330 (790)
                      ...+++||+.++....+.   .|.++++..+++.......  .     ..-..++++++.|+ +.+    .+|       
T Consensus       180 ~~~~~~~~~~l~s~~~dg---~i~~~d~~~~~~~~~~~~~--~-----~~v~~~~~~~~~l~-s~s----~d~-------  237 (342)
T d2ovrb2         180 VYSLQFDGIHVVSGSLDT---SIRVWDVETGNCIHTLTGH--Q-----SLTSGMELKDNILV-SGN----ADS-------  237 (342)
T ss_dssp             EEEEEECSSEEEEEETTS---CEEEEETTTCCEEEEECCC--C-----SCEEEEEEETTEEE-EEE----TTS-------
T ss_pred             cccccCCCCEEEEEeCCC---eEEEeecccceeeeEeccc--c-----cceeEEecCCCEEE-EEc----CCC-------
Confidence            345677888555544433   2888899887664433221  1     11345666777666 555    455       


Q ss_pred             cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccC
Q psy463          331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSA  409 (790)
Q Consensus       331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~  409 (790)
                       .|.++|....+     ....+............++++++.++..+.+     ..|...++.+  ++. +.+....  ..
T Consensus       238 -~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~D-----g~i~iwd~~t--g~~i~~~~~~~--~~  302 (342)
T d2ovrb2         238 -TVKIWDIKTGQ-----CLQTLQGPNKHQSAVTCLQFNKNFVITSSDD-----GTVKLWDLKT--GEFIRNLVTLE--SG  302 (342)
T ss_dssp             -CEEEEETTTCC-----EEEEECSTTSCSSCEEEEEECSSEEEEEETT-----SEEEEEETTT--CCEEEEEEECT--TG
T ss_pred             -EEEEEeccccc-----ccccccccceeeeceeecccCCCeeEEEcCC-----CEEEEEECCC--CCEEEEEeccc--CC
Confidence             58888987665     1223332211111223445566666655554     3566667765  332 2232110  01


Q ss_pred             CCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecC
Q psy463          410 NQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKT  445 (790)
Q Consensus       410 ~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~  445 (790)
                      +....+..++|+|++.+++.....-+ --.|++.|.+
T Consensus       303 ~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~  339 (342)
T d2ovrb2         303 GSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD  339 (342)
T ss_dssp             GGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred             CCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCC
Confidence            12345788999999987665433222 4557776654

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.77  E-value=0.00043  Score=70.61  Aligned_cols=109  Identities=18%  Similarity=0.163  Sum_probs=68.7

Q ss_pred             CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCC--------CcccccCCceeEccCCCEEEEEEcc
Q psy463          246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLD--------RGWFEPFDHLRFSSDGKKMLLILSH  317 (790)
Q Consensus       246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~--------~~~~~~~~~~~~spDg~~i~~~~~~  317 (790)
                      ...+..++|||||++++....+.....|.+.|++++++.........        .+........+|||||+.|+ +.+ 
T Consensus       231 ~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~-S~s-  308 (393)
T d1sq9a_         231 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC-SAG-  308 (393)
T ss_dssp             CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEE-EEE-
T ss_pred             cceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeE-EEC-
Confidence            44577899999999776665554445588889998876543321100        00001134689999999877 666 


Q ss_pred             ccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe---EEEeeecCCCEE
Q psy463          318 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT---EILAWDEKENNV  372 (790)
Q Consensus       318 ~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~---~~~~~s~dg~~l  372 (790)
                         .++        .|.++|+++++     ....|+.+...+.   ..+.++++++.+
T Consensus       309 ---~D~--------~v~vWd~~~g~-----~~~~l~gH~~~v~~~~~~~~~~~~~~~~  350 (393)
T d1sq9a_         309 ---WDG--------KLRFWDVKTKE-----RITTLNMHCDDIEIEEDILAVDEHGDSL  350 (393)
T ss_dssp             ---TTS--------EEEEEETTTTE-----EEEEEECCGGGCSSGGGCCCBCTTSCBC
T ss_pred             ---CCC--------EEEEEECCCCC-----EEEEECCcCCcccCCccEEEECCCCCEE
Confidence               556        78999998887     2344544332221   125788888754

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=97.74  E-value=0.00014  Score=73.86  Aligned_cols=117  Identities=13%  Similarity=0.072  Sum_probs=68.5

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc----ccCCC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ----ESDGS  324 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~----~~~g~  324 (790)
                      ......+||||+++..+...+  +|.++|++++++..+...+...    ..+..++||||++++++.....    ..+|.
T Consensus        74 ~s~t~gtpDGr~lfV~d~~~~--rVavIDl~t~k~~~ii~iP~g~----gphgi~~spdg~t~YV~~~~~~~v~~~~dg~  147 (441)
T d1qnia2          74 ISMTDGRYDGKYLFINDKANT--RVARIRLDIMKTDKITHIPNVQ----AIHGLRLQKVPKTNYVFCNAEFVIPQPNDGT  147 (441)
T ss_dssp             EEEETTEEEEEEEEEEETTTT--EEEEEETTTTEEEEEEECTTCC----CEEEEEECCSSBCCEEEEEECSCEESSCSSS
T ss_pred             cceecccCCCCEEEEEcCCCC--EEEEEECCCCcEeeEEecCCCC----CccceEEeccCCEEEEEeccCCcccccCccc
Confidence            344556899999888877544  5999999999998877643211    1346899999998775543100    00110


Q ss_pred             CC--cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          325 TP--VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       325 ~~--~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      ..  ..++..+..+|..+.+     ...++.-+. ... ...++|||+++|+.+..
T Consensus       148 ~~~~~~~~~~~~~iD~~t~~-----v~~qI~v~~-~p~-~v~~spdGk~a~vt~~n  196 (441)
T d1qnia2         148 DFSLDNSYTMFTAIDAETMD-----VAWQVIVDG-NLD-NTDADYTGKYATSTCYN  196 (441)
T ss_dssp             CCCGGGEEEEEEEEETTTCS-----EEEEEEESS-CCC-CEEECSSSSEEEEEESC
T ss_pred             ccccccccceEEeecCccce-----eeEEEecCC-Ccc-ceEECCCCCEEEEEecC
Confidence            00  0012234456766554     122332221 122 37899999998887644

>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Pancreatic lipase, N-terminal domain
domain: Pancreatic lipase, N-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.70  E-value=4.2e-05  Score=74.23  Aligned_cols=113  Identities=13%  Similarity=0.043  Sum_probs=74.0

Q ss_pred             CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463          499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL  578 (790)
Q Consensus       499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~  578 (790)
                      ...|+++++||..+..  ...|.......++...++.|+++|.......  .+..+....  ......+...+++|....
T Consensus        68 ~~~pt~iiiHG~~~~~--~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~--~Y~~a~~n~--~~Vg~~ia~~i~~l~~~~  141 (338)
T d1bu8a2          68 LDRKTRFIVHGFIDKG--EDGWLLDMCKKMFQVEKVNCICVDWRRGSRT--EYTQASYNT--RVVGAEIAFLVQVLSTEM  141 (338)
T ss_dssp             TTSEEEEEECCSCCTT--CTTHHHHHHHHHHTTCCEEEEEEECHHHHSS--CHHHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEeCcccCCC--CcccHHHHHHHHHhcCCceEEEEechhhccc--chHHHHHhH--HHHHHHHHHHHHHHHHhc
Confidence            4579999999987753  3445555666777777899999998642211  111111110  011233445666665433


Q ss_pred             CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      + ++.+++.++|||+|+.+|..+..+-+. ++..++...|.
T Consensus       142 g-~~~~~vhlIGhSLGAhiaG~ag~~l~~-kigrItgLDPA  180 (338)
T d1bu8a2         142 G-YSPENVHLIGHSLGAHVVGEAGRRLEG-HVGRITGLDPA  180 (338)
T ss_dssp             C-CCGGGEEEEEETHHHHHHHHHHHHTTT-CSSEEEEESCB
T ss_pred             C-CCcceeEEEeccHHHHHHHHHHHhhcc-ccccccccccC
Confidence            4 788999999999999999998876653 56777777664

>d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Palmitoyl protein thioesterase 1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.64  E-value=0.00011  Score=69.53  Aligned_cols=112  Identities=17%  Similarity=0.097  Sum_probs=64.7

Q ss_pred             CCCCccEEEEEcCCCCccccccccccchHHHHHhcC--CeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHH
Q psy463          497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNK--DIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYL  574 (790)
Q Consensus       497 ~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l  574 (790)
                      +..+.| ||++||..++..  ..........++.+.  |+.|.++++......+   .....    ...+.+.++.+...
T Consensus         2 p~~P~P-VVLvHGlg~s~~--~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~---~~~~~----~~~~~~~~e~v~~~   71 (279)
T d1ei9a_           2 PPAPLP-LVIWHGMGDSCC--NPLSMGAIKKMVEKKIPGIHVLSLEIGKTLRED---VENSF----FLNVNSQVTTVCQI   71 (279)
T ss_dssp             TTSSCC-EEEECCTTCCSC--CTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHH---HHHHH----HSCHHHHHHHHHHH
T ss_pred             cCCCCc-EEEECCCCCCCC--ChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccc---cccch----hhhHHHHHHHHHHH
Confidence            344556 568999766421  111222333444333  8899999875422111   11110    02344555444444


Q ss_pred             HHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463          575 QENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV  619 (790)
Q Consensus       575 ~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~  619 (790)
                      ++..+ .-..+|-++||||||.++-.++.+.+...+...|..++.
T Consensus        72 I~~~~-~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsP  115 (279)
T d1ei9a_          72 LAKDP-KLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ  115 (279)
T ss_dssp             HHSCG-GGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred             HHhcc-ccccceeEEEEccccHHHHHHHHHcCCCCcceEEEECCC
Confidence            43222 224689999999999999999999887667777766654

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=0.0088  Score=56.55  Aligned_cols=185  Identities=14%  Similarity=0.074  Sum_probs=112.5

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCc-
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGT-  282 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~-  282 (790)
                      .+|..+++++.+.      ..+.                 ........+.+.+..+.++|++...+  .|+.+++++.. 
T Consensus        10 ~~I~~~~l~~~~~------~~~~-----------------~~~~~~~~id~d~~~~~lYw~D~~~~--~I~~~~l~~~~~   64 (266)
T d1ijqa1          10 HEVRKMTLDRSEY------TSLI-----------------PNLRNVVALDTEVASNRIYWSDLSQR--MICSTQLDRAHG   64 (266)
T ss_dssp             SSEEEEETTSCCC------EEEE-----------------CSCSSEEEEEEETTTTEEEEEETTTT--EEEEEEC-----
T ss_pred             CeEEEEECCCCcc------eeee-----------------CCCCceEEEEEEeCCCEEEEEECCCC--EEEEEEecCCCC
Confidence            5788999987652      2222                 22233456778888888899875443  48888776532 


Q ss_pred             ---eeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC-CCeE
Q psy463          283 ---CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR-GRFT  358 (790)
Q Consensus       283 ---~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~-~~~~  358 (790)
                         .+.+.....     ......++.+-++.||++-.      +      ...|.+.++++..      .+.+.. +...
T Consensus        65 ~~~~~~~~~~~~-----~~p~glAvD~~~~~lY~~d~------~------~~~I~v~~~~g~~------~~~~~~~~~~~  121 (266)
T d1ijqa1          65 VSSYDTVISRDI-----QAPDGLAVDWIHSNIYWTDS------V------LGTVSVADTKGVK------RKTLFRENGSK  121 (266)
T ss_dssp             ---CEEEECSSC-----SCCCEEEEETTTTEEEEEET------T------TTEEEEEETTSSS------EEEEEECTTCC
T ss_pred             CcceEEEEeCCC-----CCcceEEEeeccceEEEEec------C------CCEEEeEecCCce------EEEEEcCCCCC
Confidence               122222110     11335777777888885332      2      3479999998775      444333 2222


Q ss_pred             EeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCe
Q psy463          359 VTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPE  438 (790)
Q Consensus       359 ~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~  438 (790)
                      ..+ ++.+|....||+......   ..|+++++++  ...+.+...      +......+++.+.++.|++....  ...
T Consensus       122 P~~-l~vd~~~g~ly~~~~~~~---~~I~r~~~dG--s~~~~l~~~------~~~~p~gl~iD~~~~~lYw~d~~--~~~  187 (266)
T d1ijqa1         122 PRA-IVVDPVHGFMYWTDWGTP---AKIKKGGLNG--VDIYSLVTE------NIQWPNGITLDLLSGRLYWVDSK--LHS  187 (266)
T ss_dssp             EEE-EEEETTTTEEEEEECSSS---CEEEEEETTS--CCEEEEECS------SCSCEEEEEEETTTTEEEEEETT--TTE
T ss_pred             cce-EEEEcccCeEEEeccCCC---cceeEeccCC--Cceeccccc------ccceeeEEEeeccccEEEEecCC--cCE
Confidence            333 778898888888764432   5799999987  444444431      22344678899988888776322  457


Q ss_pred             EEEEecCCCeEE
Q psy463          439 IMLFDKTGQRLL  450 (790)
Q Consensus       439 i~~~~~~~~~~~  450 (790)
                      |..+++++...+
T Consensus       188 I~~~~~dG~~~~  199 (266)
T d1ijqa1         188 ISSIDVNGGNRK  199 (266)
T ss_dssp             EEEEETTSCSCE
T ss_pred             EEEEECCCCCEE
Confidence            888898875433

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=97.57  E-value=0.00092  Score=67.78  Aligned_cols=29  Identities=24%  Similarity=0.345  Sum_probs=20.4

Q ss_pred             CceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC
Q psy463          300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD  340 (790)
Q Consensus       300 ~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~  340 (790)
                      .....||||++++ ...   ..++        .+-++|++.
T Consensus       261 hGv~vSPDGkyl~-~~~---~~~~--------tvsv~d~~k  289 (441)
T d1qnia2         261 HGLNTSPDGKYFI-ANG---KLSP--------TVSVIAIDK  289 (441)
T ss_dssp             CCEEECTTSCEEE-EEC---TTSS--------BEEEEEGGG
T ss_pred             cCceECCCCCEEE-EeC---CcCC--------cEEEEEeeh
Confidence            4789999999887 343   1233        688898753

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.49  E-value=0.011  Score=55.74  Aligned_cols=167  Identities=13%  Similarity=0.146  Sum_probs=102.2

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      ...+.+-+-.+.++|++...+  .|++++++++..+.+......     .....++..-+..||+.-.      +     
T Consensus        38 ~~~ld~D~~~~~iywsd~~~~--~I~~~~l~g~~~~~v~~~~~~-----~p~~iAvD~~~~~lY~~d~------~-----   99 (263)
T d1npea_          38 IIGLAFDCVDKVVYWTDISEP--SIGRASLHGGEPTTIIRQDLG-----SPEGIALDHLGRTIFWTDS------Q-----   99 (263)
T ss_dssp             EEEEEEETTTTEEEEEETTTT--EEEEEESSSCCCEEEECTTCC-----CEEEEEEETTTTEEEEEET------T-----
T ss_pred             EEEEEEEeCCCEEEEEECCCC--eEEEEEcccCCcEEEEEeccc-----cccEEEEeccCCeEEEecc------C-----
Confidence            334556666668888865433  499999988777666532211     1225566666777885332      2     


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccccc
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTS  408 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~  408 (790)
                       ...|.++++++..      .+.|..........++.+|.+..+|++.....  ...|+++++++  ...+.+...    
T Consensus       100 -~~~I~~~~~dg~~------~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~--~~~I~r~~~dG--~~~~~i~~~----  164 (263)
T d1npea_         100 -LDRIEVAKMDGTQ------RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRD--NPKIETSHMDG--TNRRILAQD----  164 (263)
T ss_dssp             -TTEEEEEETTSCS------CEEEECSSCSSEEEEEEETTTTEEEEEECCSS--SCEEEEEETTS--CCCEEEECT----
T ss_pred             -CCEEEEEecCCce------EEEEecccccCCcEEEEecccCcEEEeecCCC--CcEEEEecCCC--CCceeeeee----
Confidence             3479999988765      44443322222233788999998988765421  24699999987  344444321    


Q ss_pred             CCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463          409 ANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       409 ~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                        +...-..+++.+.++.|++...+  ...|...++++...+.+
T Consensus       165 --~~~~P~glaiD~~~~~lYw~d~~--~~~I~~~~~~g~~~~~v  204 (263)
T d1npea_         165 --NLGLPNGLTFDAFSSQLCWVDAG--THRAECLNPAQPGRRKV  204 (263)
T ss_dssp             --TCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTEEEEEEE
T ss_pred             --cccccceEEEeecCcEEEEEeCC--CCEEEEEECCCCCeEEE
Confidence              22334567888888877665333  35688888877554433

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=97.44  E-value=0.015  Score=50.46  Aligned_cols=182  Identities=8%  Similarity=0.042  Sum_probs=107.9

Q ss_pred             EEEEecccCCCCCCCccccceeEEEecCC-cccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEE
Q psy463          185 LLILSHNQESDGSTPVDSWDHLTFIDLDD-QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAW  263 (790)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~  263 (790)
                      +.|++.-..+.      ....||..++.. |+..++..|+.                      ..+  .+..-|++.+++
T Consensus        69 i~f~RDV~kGk------E~Hai~~~Nlk~~GEE~~i~spk~----------------------vRI--~S~~yddk~vvF  118 (313)
T d2hu7a1          69 VILVRDVSKGA------EQHALFKVNTSRPGEEQRLEAVKP----------------------MRI--LSGVDTGEAVVF  118 (313)
T ss_dssp             EEEEEECSTTS------CCEEEEEEETTSTTCEEECTTSCS----------------------BEE--EEEEECSSCEEE
T ss_pred             EEEEeehhcCc------ceeeEEEEccCCCCeeeEecCCce----------------------EEE--EEeeecCceEEE
Confidence            67777644332      236889999872 33333322222                      223  344568997777


Q ss_pred             EeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccC--CCEEEEEEccccccCCCCCcCcccEEEEEEcCCC
Q psy463          264 VNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD--GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQ  341 (790)
Q Consensus       264 ~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spD--g~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~  341 (790)
                      +...++...+|++  ++|..+.|...+          .+.|-.|  |+.|+=+.-   -..+      ...++..|+.+|
T Consensus       119 ~Gased~~~LYvi--egGklrkL~~vP----------pFsFVtDI~~d~I~G~g~---~~g~------~~sfF~adl~SG  177 (313)
T d2hu7a1         119 TGATEDRVALYAL--DGGGLRELARLP----------GFGFVSDIRGDLIAGLGF---FGGG------RVSLFTSNLSSG  177 (313)
T ss_dssp             EEECSSCEEEEEE--ETTEEEEEEEES----------SCEEEEEEETTEEEEEEE---EETT------EEEEEEEETTTE
T ss_pred             ecccCCceEEEEE--eCCceeeeccCC----------CcceEEeccCCeEEEEee---ecCC------cceEEEEecccC
Confidence            7666777667776  578999888764          3444443  776653322   1223      556899999888


Q ss_pred             CcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccccc-CCCcccEEEEEE
Q psy463          342 AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTS-ANQKCSYSGATF  420 (790)
Q Consensus       342 ~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~-~~~~~~~~~~~~  420 (790)
                      .      .+.+|.++..+.. ...+++.|.   .+...++++..+..+++.+  ++.+++...-.+. .-....+.+..+
T Consensus       178 ~------lri~tpkeGS~~~-ay~~~gnKV---~sdyEt~gEsywit~D~~s--~~yerve~P~kd~~sy~p~~I~~~~Y  245 (313)
T d2hu7a1         178 G------LRVFDSGEGSFSS-ASISPGMKV---TAGLETAREARLVTVDPRD--GSVEDLELPSKDFSSYRPTAITWLGY  245 (313)
T ss_dssp             E------EEEECCSSEEEEE-EEECTTSCE---EEEEEESSCEEEEEECTTT--CCEEECCCSSCHHHHHCCSEEEEEEE
T ss_pred             C------EEEecCCCCcccc-eeEccCcee---eeccCCCCceEEEEEeccc--CceeeeecCcccceeecceEEEeeee
Confidence            7      8999998877765 667888774   3333333335555677776  5555543210000 001235566778


Q ss_pred             ecCCcEEEE
Q psy463          421 STNVSYYVL  429 (790)
Q Consensus       421 s~dg~~~~~  429 (790)
                      .||++.++.
T Consensus       246 ~Pdd~L~ii  254 (313)
T d2hu7a1         246 LPDGRLAVV  254 (313)
T ss_dssp             CTTSCEEEE
T ss_pred             CCCCcEEEE
Confidence            999987433

>d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Serine carboxypeptidase II
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.27  E-value=0.0023  Score=65.55  Aligned_cols=143  Identities=17%  Similarity=0.118  Sum_probs=81.4

Q ss_pred             EEEEcCC-CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc------------chHHHHHhcCCeEEEEE
Q psy463          473 MSVPIQP-NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV------------DWNLYLADNKDIVVAYI  539 (790)
Q Consensus       473 ~~~~~~d-g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~------------~~~~~~~~~~G~~v~~~  539 (790)
                      -.+...+ +..+..|.+...+    .....|+|+++-||||+..+...+..            .....-.. +=..++.+
T Consensus        19 Gyl~v~~~~~~lfyw~~~s~~----~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~-~~anllfi   93 (421)
T d1wpxa1          19 GYLDVEDEDKHFFFWTFESRN----DPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWN-SNATVIFL   93 (421)
T ss_dssp             EEEECTTSCCEEEEEEECCSS----CTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGG-GSSEEEEE
T ss_pred             eeeecCCCCceEEEEEEEeCC----CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccc-cccCEEEE
Confidence            3455543 5678888875543    23557999999999998543111110            00001111 12468999


Q ss_pred             cCC-CCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc--CCCceEEEEechHHHHHHHHHhc-----CCCCceE
Q psy463          540 DGR-NSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI--DKTRTAIWGWSYGGYATGLALAL-----DPSNVFK  611 (790)
Q Consensus       540 d~r-G~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~--d~~ri~i~G~S~GG~~a~~~a~~-----~p~~~~~  611 (790)
                      |.+ |.|.+-.. .....  -......|+.++++.+.+.++..  -..++.|+|-||||..+..+|.+     .+.-.++
T Consensus        94 D~PvGtGfSy~~-~~~~~--~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlk  170 (421)
T d1wpxa1          94 DQPVNVGFSYSG-SSGVS--NTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLT  170 (421)
T ss_dssp             CCSTTSTTCBCS-SCCCC--SHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCC
T ss_pred             ecCCCCCceecC-Ccccc--chHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCccee
Confidence            944 66543111 00100  01123456666665555546654  34689999999999877665522     1223577


Q ss_pred             EEEEeCCCCCcc
Q psy463          612 CGISVAPVTDWI  623 (790)
Q Consensus       612 ~~v~~~~~~~~~  623 (790)
                      +++.+.|+.+..
T Consensus       171 Gi~iGng~~dp~  182 (421)
T d1wpxa1         171 SVLIGNGLTDPL  182 (421)
T ss_dssp             EEEEESCCCCHH
T ss_pred             eeEecCCcccch
Confidence            999999998754

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=97.18  E-value=0.09  Score=50.32  Aligned_cols=174  Identities=14%  Similarity=0.134  Sum_probs=85.0

Q ss_pred             CCCEEEEEEEccCCcEEEEEeccCcceEEEEEEC--CCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSI--NEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~--~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      .......++++|||++++.......   ++.++.  ..+....+..... ..+   .....+.+||+ +++..+      
T Consensus        66 ~~~~~~gla~~~dG~l~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~---~n~i~~~~~g~-~~v~~~------  131 (302)
T d2p4oa1          66 VEGKVSGLAFTSNGDLVATGWNADS---IPVVSLVKSDGTVETLLTLPD-AIF---LNGITPLSDTQ-YLTADS------  131 (302)
T ss_dssp             CSSEEEEEEECTTSCEEEEEECTTS---CEEEEEECTTSCEEEEEECTT-CSC---EEEEEESSSSE-EEEEET------
T ss_pred             CCCCcceEEEcCCCCeEEEecCCce---EEEEEecccccceeeccccCC-ccc---cceeEEccCCC-EEeecc------
Confidence            3456678999999994433332222   333333  3344455544322 111   23578899996 442332      


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCC-Cc-ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDK-VP-VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC  400 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~-~~-~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~  400 (790)
                      +      ...++.++..++...... .. ................+.+++.+|+.....    ..|+++++... +....
T Consensus       132 ~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~----~~i~~~~~~~~-~~~~~  200 (302)
T d2p4oa1         132 Y------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEK----MLLLRIPVDST-DKPGE  200 (302)
T ss_dssp             T------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTT----TEEEEEEBCTT-SCBCC
T ss_pred             c------cccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeeecCCC----CeEEecccccc-ccccc
Confidence            2      337888887765310000 00 000000000011112334567788876653    47899988652 22111


Q ss_pred             eeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEE
Q psy463          401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLY  451 (790)
Q Consensus       401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~  451 (790)
                      .... .    .......+.+++||..++....   ...|++++.+++....
T Consensus       201 ~~~~-~----~~~~pdgia~d~dG~l~va~~~---~~~V~~i~p~G~~~~~  243 (302)
T d2p4oa1         201 PEIF-V----EQTNIDDFAFDVEGNLYGATHI---YNSVVRIAPDRSTTII  243 (302)
T ss_dssp             CEEE-E----ESCCCSSEEEBTTCCEEEECBT---TCCEEEECTTCCEEEE
T ss_pred             cccc-c----CCCCCcceEECCCCCEEEEEcC---CCcEEEECCCCCEEEE
Confidence            1100 0    1122345889999985433322   2457888777654443

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.07  E-value=0.1  Score=50.36  Aligned_cols=150  Identities=10%  Similarity=0.096  Sum_probs=81.7

Q ss_pred             EEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccE
Q psy463          253 NWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDH  332 (790)
Q Consensus       253 ~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~  332 (790)
                      .+.++|++++....+.   .+...+..+++.........     .......|+|+++.++ ..+    .+|        .
T Consensus       166 ~~~~~~~~~~~~~~d~---~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~----~d~--------~  224 (355)
T d1nexb2         166 TVSGHGNIVVSGSYDN---TLIVWDVAQMKCLYILSGHT-----DRIYSTIYDHERKRCI-SAS----MDT--------T  224 (355)
T ss_dssp             EEEEETTEEEEEETTS---CEEEEETTTTEEEEEECCCS-----SCEEEEEEETTTTEEE-EEE----TTS--------C
T ss_pred             ccccccceeeeecccc---eeeeeecccccceeeeeccc-----cccccccccccceeee-ccc----ccc--------e
Confidence            4566777544443322   27888888776543332211     1133678999999887 444    345        5


Q ss_pred             EEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCc
Q psy463          333 LTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQK  412 (790)
Q Consensus       333 l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~  412 (790)
                      |.+++..++.     ....+..+...+.. +.|+  ++.|+..+.+     ..|...++..  .. +.+...      ..
T Consensus       225 i~i~d~~~~~-----~~~~~~~h~~~v~~-~~~~--~~~l~~~~~d-----g~i~iwd~~~--~~-~~~~~~------~~  282 (355)
T d1nexb2         225 IRIWDLENGE-----LMYTLQGHTALVGL-LRLS--DKFLVSAAAD-----GSIRGWDAND--YS-RKFSYH------HT  282 (355)
T ss_dssp             EEEEETTTCC-----EEEEECCCSSCCCE-EEEC--SSEEEEECTT-----SEEEEEETTT--CC-EEEEEE------CT
T ss_pred             EEeeeccccc-----cccccccccccccc-cccc--cceeeeeecc-----cccccccccc--cc-eecccc------cC
Confidence            8888988776     13334433333333 4554  5666555444     3455556654  22 222211      11


Q ss_pred             ccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463          413 CSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       413 ~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~  449 (790)
                      .......++++++.++...    -..|.++|+++++.
T Consensus       283 ~~~~~~~~~~~~~~l~~g~----d~~i~vwd~~tg~~  315 (355)
T d1nexb2         283 NLSAITTFYVSDNILVSGS----ENQFNIYNLRSGKL  315 (355)
T ss_dssp             TCCCCCEEEECSSEEEEEE----TTEEEEEETTTCCB
T ss_pred             CceEEEEEcCCCCEEEEEe----CCEEEEEECCCCCE
Confidence            1122235778888665442    24688999876543

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.07  E-value=0.098  Score=48.74  Aligned_cols=139  Identities=12%  Similarity=0.121  Sum_probs=72.9

Q ss_pred             EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463          248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV  327 (790)
Q Consensus       248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~  327 (790)
                      ....+++.++|+++. .+...  ..++.++..+....... ..   +.. ....+.++|+|+ +++...    .      
T Consensus        99 ~p~~iavd~~g~i~v-~d~~~--~~~~~~~~~~~~~~~~~-~~---~~~-~p~~i~~~~~g~-~~v~~~----~------  159 (260)
T d1rwia_          99 YPEGLAVDTQGAVYV-ADRGN--NRVVKLAAGSKTQTVLP-FT---GLN-DPDGVAVDNSGN-VYVTDT----D------  159 (260)
T ss_dssp             SEEEEEECTTCCEEE-EEGGG--TEEEEECTTCSSCEECC-CC---SCC-SCCEEEECTTCC-EEEEEG----G------
T ss_pred             ecccccccccceeEe-ecccc--ccccccccccceeeeee-ec---ccC-CcceeeecCCCC-Eeeecc----c------
Confidence            345788899998433 33322  23677766554332221 11   111 134678899998 443332    2      


Q ss_pred             CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccc
Q psy463          328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLT  407 (790)
Q Consensus       328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~  407 (790)
                        ...|++++.+++.      ...+.........-++++++|+ ||+.....    ..|++++.++  .....+...   
T Consensus       160 --~~~i~~~d~~~~~------~~~~~~~~~~~p~gi~~d~~g~-l~vsd~~~----~~i~~~~~~~--~~~~~~~~~---  221 (260)
T d1rwia_         160 --NNRVVKLEAESNN------QVVLPFTDITAPWGIAVDEAGT-VYVTEHNT----NQVVKLLAGS--TTSTVLPFT---  221 (260)
T ss_dssp             --GTEEEEECTTTCC------EEECCCSSCCSEEEEEECTTCC-EEEEETTT----TEEEEECTTC--SCCEECCCC---
T ss_pred             --cccccccccccce------eeeeeccccCCCccceeeeeee-eeeeecCC----CEEEEEeCCC--CeEEEEccC---
Confidence              2378999987654      3333222222122367888886 66654433    4688887665  222222210   


Q ss_pred             cCCCcccEEEEEEecCCcE
Q psy463          408 SANQKCSYSGATFSTNVSY  426 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~dg~~  426 (790)
                         +-..-..+.++++|..
T Consensus       222 ---~~~~P~~i~~d~~g~l  237 (260)
T d1rwia_         222 ---GLNTPLAVAVDSDRTV  237 (260)
T ss_dssp             ---SCCCEEEEEECTTCCE
T ss_pred             ---CCCCeEEEEEeCCCCE
Confidence               1123345777777763

>d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Serine carboxypeptidase II
species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]

Probab=96.93  E-value=0.027  Score=58.26  Aligned_cols=63  Identities=8%  Similarity=-0.019  Sum_probs=52.0

Q ss_pred             CccEEEEecCCCcccchhhhHHHHHHHH--------hc--------------------C-----CceEEEEcCCCCCcCC
Q psy463          725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQ--------HA--------------------D-----IMFQSQTYPDEEHGLI  771 (790)
Q Consensus       725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~--------~~--------------------g-----~~~~~~~~p~~~H~~~  771 (790)
                      ..++||.+|..|.+|+...++.+.+.|.        ..                    |     ....++.+.++||+..
T Consensus       372 girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmvP  451 (483)
T d1ac5a_         372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP  451 (483)
T ss_dssp             TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred             CCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccCc
Confidence            5799999999999999999999998874        10                    1     0367888899999998


Q ss_pred             C-cchHHHHHHHHHHHH
Q psy463          772 G-VRPHFYHTLERFLDS  787 (790)
Q Consensus       772 ~-~~~~~~~~i~~fl~~  787 (790)
                      . .+...+..+.+||++
T Consensus       452 ~dqP~~a~~mi~~fl~~  468 (483)
T d1ac5a_         452 FDKSLVSRGIVDIYSND  468 (483)
T ss_dssp             HHCHHHHHHHHHHHTTC
T ss_pred             ccCHHHHHHHHHHHhCC
Confidence            7 888888999998864

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.85  E-value=0.0018  Score=65.72  Aligned_cols=122  Identities=10%  Similarity=0.085  Sum_probs=70.3

Q ss_pred             CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCC-CcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463          247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLD-RGWFEPFDHLRFSSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~-~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~  325 (790)
                      .....+.|||||.+ +....+   ..|.++|+.+++.......... .+........+|||||+.|+ +.+    .++. 
T Consensus       185 ~~~~~v~~s~dg~l-asgs~D---g~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~-sgs----~D~t-  254 (393)
T d1sq9a_         185 QFATSVDISERGLI-ATGFNN---GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA-IAH----DSNS-  254 (393)
T ss_dssp             CCCCEEEECTTSEE-EEECTT---SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEE-EEE----EETT-
T ss_pred             CcEEEEEECCCCEE-EEEeCC---CcEEEEeecccccccccccccccccccceEEEcccccccceee-eec----CCCC-
Confidence            34567899999943 332222   2388889998876543332110 00111234688999999887 665    2221 


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCccccc-------------CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLT-------------RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA  392 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt-------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~  392 (790)
                          ...|.++|+++++.     ...|.             .+...+.. ++|+||++.|+-.+.+     ..|.+-+++
T Consensus       255 ----~~~i~lwd~~~g~~-----~~~l~~~~~~~~~~~~~~gH~~~V~~-l~fspd~~~l~S~s~D-----~~v~vWd~~  319 (393)
T d1sq9a_         255 ----FGCITLYETEFGER-----IGSLSVPTHSSQASLGEFAHSSWVMS-LSFNDSGETLCSAGWD-----GKLRFWDVK  319 (393)
T ss_dssp             ----EEEEEEEETTTCCE-----EEEECBC--------CCBSBSSCEEE-EEECSSSSEEEEEETT-----SEEEEEETT
T ss_pred             ----cceeeeccccccee-----eeeeccccccccceeeeecccCceee-eccCCCCCeeEEECCC-----CEEEEEECC
Confidence                23577889887651     22222             12223444 8899999977666555     345555665


Q ss_pred             C
Q psy463          393 D  393 (790)
Q Consensus       393 ~  393 (790)
                      +
T Consensus       320 ~  320 (393)
T d1sq9a_         320 T  320 (393)
T ss_dssp             T
T ss_pred             C
Confidence            5

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.19  E-value=0.47  Score=43.73  Aligned_cols=110  Identities=11%  Similarity=0.065  Sum_probs=58.7

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS  329 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~  329 (790)
                      ..++.+|+|+++ ++...  ...|+.++.++.....+....    ... ...+++.++|+ |++.-.      +      
T Consensus       143 ~~i~~~~~g~~~-v~~~~--~~~i~~~d~~~~~~~~~~~~~----~~~-p~gi~~d~~g~-l~vsd~------~------  201 (260)
T d1rwia_         143 DGVAVDNSGNVY-VTDTD--NNRVVKLEAESNNQVVLPFTD----ITA-PWGIAVDEAGT-VYVTEH------N------  201 (260)
T ss_dssp             CEEEECTTCCEE-EEEGG--GTEEEEECTTTCCEEECCCSS----CCS-EEEEEECTTCC-EEEEET------T------
T ss_pred             ceeeecCCCCEe-eeccc--cccccccccccceeeeeeccc----cCC-Cccceeeeeee-eeeeec------C------
Confidence            356778999842 33322  234888888765443222111    111 23578889986 543322      2      


Q ss_pred             ccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463          330 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI  391 (790)
Q Consensus       330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  391 (790)
                      ...|++++.+++.      ...+..........++++++|. ||++...+    .+|.+++.
T Consensus       202 ~~~i~~~~~~~~~------~~~~~~~~~~~P~~i~~d~~g~-l~vad~~~----~rI~~i~~  252 (260)
T d1rwia_         202 TNQVVKLLAGSTT------STVLPFTGLNTPLAVAVDSDRT-VYVADRGN----DRVVKLTS  252 (260)
T ss_dssp             TTEEEEECTTCSC------CEECCCCSCCCEEEEEECTTCC-EEEEEGGG----TEEEEECC
T ss_pred             CCEEEEEeCCCCe------EEEEccCCCCCeEEEEEeCCCC-EEEEECCC----CEEEEEeC
Confidence            2368888876654      3333332222223377888886 66554332    35666654

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.10  E-value=0.047  Score=52.56  Aligned_cols=112  Identities=9%  Similarity=0.012  Sum_probs=61.8

Q ss_pred             CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463          244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD  322 (790)
Q Consensus       244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~  322 (790)
                      .....+..++|||||++++....+.   .|.++|++++.. ..+.......   .......|+|++..++++.+    .+
T Consensus         9 ~h~d~I~~l~fsp~~~~L~s~s~Dg---~v~iwd~~~~~~~~~~~~~~~h~---~~V~~v~f~~~~~~~l~sg~----~d   78 (342)
T d1yfqa_           9 APKDYISDIKIIPSKSLLLITSWDG---SLTVYKFDIQAKNVDLLQSLRYK---HPLLCCNFIDNTDLQIYVGT----VQ   78 (342)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTS---EEEEEEEETTTTEEEEEEEEECS---SCEEEEEEEESSSEEEEEEE----TT
T ss_pred             CCCCCEEEEEEeCCCCEEEEEECCC---eEEEEEccCCCcceEEEEecCCC---CCEEEEEEeCCCCCEEEEcc----cc
Confidence            4456789999999999666655433   266666655433 2222211111   12446889998876665665    55


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~  378 (790)
                      |        .+.+++...+.     ....+............+.+++..++..+..
T Consensus        79 ~--------~v~~w~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (342)
T d1yfqa_          79 G--------EILKVDLIGSP-----SFQALTNNEANLGICRICKYGDDKLIAASWD  121 (342)
T ss_dssp             S--------CEEEECSSSSS-----SEEECBSCCCCSCEEEEEEETTTEEEEEETT
T ss_pred             c--------ceeeeeccccc-----ccccccccccccccccccccccccccccccc
Confidence            6        57888877654     1222222221112223455666666665555

>d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase L1
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.63  E-value=0.018  Score=56.70  Aligned_cols=20  Identities=25%  Similarity=0.358  Sum_probs=17.3

Q ss_pred             CceEEEEechHHHHHHHHHh
Q psy463          584 TRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       584 ~ri~i~G~S~GG~~a~~~a~  603 (790)
                      .||.|+||||||..+=+++.
T Consensus       105 ~kVnLIgHS~GGld~Ryl~~  124 (388)
T d1ku0a_         105 GRVHIIAHSQGGQTARMLVS  124 (388)
T ss_dssp             CCEEEEEETTHHHHHHHHHH
T ss_pred             CceeEeecccccHHHHHHHH
Confidence            58999999999998877664

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.97  E-value=0.19  Score=47.15  Aligned_cols=137  Identities=11%  Similarity=0.063  Sum_probs=70.8

Q ss_pred             EEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCccc
Q psy463          252 VNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWD  331 (790)
Q Consensus       252 ~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~  331 (790)
                      ...+|+++.++......+.  +.++++.+........    ...........|||||+.|+ +.+    .+|        
T Consensus       124 ~~~~~~~~~~~v~~~~~~~--v~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~-~g~----~dg--------  184 (287)
T d1pgua2         124 SAVSLSQNYVAVGLEEGNT--IQVFKLSDLEVSFDLK----TPLRAKPSYISISPSETYIA-AGD----VMG--------  184 (287)
T ss_dssp             EEEEECSSEEEEEETTTSC--EEEEETTEEEEEEECS----SCCSSCEEEEEECTTSSEEE-EEE----TTS--------
T ss_pred             eeeeccCcceeeeccccce--eeeeeccccceeeeee----eccCCceeEEEeccCccccc-ccc----ccc--------
Confidence            4567888855444333222  5566654332221111    11111234689999999887 454    456        


Q ss_pred             EEEEEEcCCCCcccCCCcc--cccCCCeEEeEEEeeecCCC----------EEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463          332 HLTFIDLDDQAGIKDKVPV--PLTRGRFTVTEILAWDEKEN----------NVYFLSTQGSPIVQHMYRINIADPTATPE  399 (790)
Q Consensus       332 ~l~~~d~~~~~~~~~~~~~--~lt~~~~~~~~~~~~s~dg~----------~l~~~~~~~~~~~~~l~~~~~~~~~~~~~  399 (790)
                      .|.++|+.+++      ..  .+..+...+.. ++|+|+++          .++-.+.+     ..|+..++... .+  
T Consensus       185 ~i~i~d~~~~~------~~~~~~~~h~~~v~~-~~~~p~~~~~~~~~~~~~~l~sgs~D-----~~i~iw~~~~~-~~--  249 (287)
T d1pgua2         185 KILLYDLQSRE------VKTSRWAFRTSKINA-ISWKPAEKGANEEEIEEDLVATGSLD-----TNIFIYSVKRP-MK--  249 (287)
T ss_dssp             CEEEEETTTTE------EEECCSCCCSSCEEE-EEECCCC------CCSCCEEEEEETT-----SCEEEEESSCT-TC--
T ss_pred             cccceeecccc------cccccccccccccce-eeecccccccccccCCCCeeEeecCC-----CeEEEEECCCC-Ce--
Confidence            58889987664      21  22322333443 67877654          33322222     34555565431 22  


Q ss_pred             eeeecccccCCCcccEEEEEEecCCcE
Q psy463          400 CITCDLLTSANQKCSYSGATFSTNVSY  426 (790)
Q Consensus       400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~  426 (790)
                      .+..    ..+....+..+.|+|+++.
T Consensus       250 ~~~~----~~~h~~~V~~v~~~~~~~l  272 (287)
T d1pgua2         250 IIKA----LNAHKDGVNNLLWETPSTL  272 (287)
T ss_dssp             CEEE----TTSSTTCEEEEEEEETTEE
T ss_pred             EEEE----eCCCCCCeEEEEECCCCEE
Confidence            1211    1114567888999999863

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.95  E-value=1.4  Score=40.76  Aligned_cols=142  Identities=6%  Similarity=0.009  Sum_probs=71.4

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      ...++..++|+++.....   ..++.+++.++.....+-   ... ...........++|. +++...    .       
T Consensus       116 p~~~avd~~G~i~v~~~~---~~~~~~~~~~g~~~~~~g---~~~-~~~~~~~i~~d~~g~-i~v~d~----~-------  176 (279)
T d1q7fa_         116 PRGVTVDNKGRIIVVECK---VMRVIIFDQNGNVLHKFG---CSK-HLEFPNGVVVNDKQE-IFISDN----R-------  176 (279)
T ss_dssp             EEEEEECTTSCEEEEETT---TTEEEEECTTSCEEEEEE---CTT-TCSSEEEEEECSSSE-EEEEEG----G-------
T ss_pred             cceeccccCCcEEEEeec---cceeeEeccCCceeeccc---ccc-cccccceeeecccee-EEeeec----c-------
Confidence            345667788874443322   123667766544322221   111 111123566788886 543332    2       


Q ss_pred             cccEEEEEEcCCCCcccCCCcccc-cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeeccc
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPL-TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLL  406 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~l-t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~  406 (790)
                       ...|++++.++..      ...+ +.+......-++.+++|+ ||+....++   ..|.+++.++   +. ..+...  
T Consensus       177 -~~~V~~~d~~G~~------~~~~g~~g~~~~P~giavD~~G~-i~Vad~~~~---~~v~~f~~~G---~~~~~~~~~--  240 (279)
T d1q7fa_         177 -AHCVKVFNYEGQY------LRQIGGEGITNYPIGVGINSNGE-ILIADNHNN---FNLTIFTQDG---QLISALESK--  240 (279)
T ss_dssp             -GTEEEEEETTCCE------EEEESCTTTSCSEEEEEECTTCC-EEEEECSSS---CEEEEECTTS---CEEEEEEES--
T ss_pred             -ccceeeeecCCce------eeeecccccccCCcccccccCCe-EEEEECCCC---cEEEEECCCC---CEEEEEeCC--
Confidence             2378888877653      3333 222222222378899997 666544332   3566666544   32 222211  


Q ss_pred             ccCCCcccEEEEEEecCCcEEE
Q psy463          407 TSANQKCSYSGATFSTNVSYYV  428 (790)
Q Consensus       407 ~~~~~~~~~~~~~~s~dg~~~~  428 (790)
                         .....-..+++.+||..++
T Consensus       241 ---~~~~~p~~vav~~dG~l~V  259 (279)
T d1q7fa_         241 ---VKHAQCFDVALMDDGSVVL  259 (279)
T ss_dssp             ---SCCSCEEEEEEETTTEEEE
T ss_pred             ---CCCCCEeEEEEeCCCcEEE
Confidence               0222456678999987443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=94.93  E-value=0.11  Score=50.80  Aligned_cols=109  Identities=14%  Similarity=0.141  Sum_probs=63.1

Q ss_pred             cCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccc----cccCCCC---CcC
Q psy463          256 NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN----QESDGST---PVD  328 (790)
Q Consensus       256 pDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~----~~~~g~~---~~~  328 (790)
                      +|||+++..+...  .+|.++|+++-++.++...+...+    .+..+.+++++..|++....    ...+|..   +..
T Consensus        97 yDGrylFVNDkan--~RVAvIdl~~fkt~kIi~iPn~~~----~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~  170 (459)
T d1fwxa2          97 YDGRFLFMNDKAN--TRVARVRCDVMKCDAILEIPNAKG----IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVAN  170 (459)
T ss_dssp             EEEEEEEEEETTT--TEEEEEETTTTEEEEEEECSSCCS----EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-
T ss_pred             cceeEEEEEcCCC--ceEEEEECcceeeeEEEecCCCCC----CceeecccCCCeEEEEccCccccccCCCCccccchhh
Confidence            4888888887654  459999999999998887654221    23456677777766544310    0011210   000


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEc
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLST  377 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~  377 (790)
                      ....+..+|.++.+     ...++.-+. ... ...+++||+++++++.
T Consensus       171 y~~~~t~ID~~tm~-----V~~QV~V~g-~ld-~~~~s~dGK~af~Tsy  212 (459)
T d1fwxa2         171 YVNVFTAVDADKWE-----VAWQVLVSG-NLD-NCDADYEGKWAFSTSY  212 (459)
T ss_dssp             EEEEEEEEETTTTE-----EEEEEEESS-CCC-CEEECSSSSEEEEEES
T ss_pred             cceEEEEEecCCce-----EEEEeeeCC-Chh-ccccCCCCCEEEEEec
Confidence            12345577877665     122222111 112 2678999999988863

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.91  E-value=0.23  Score=46.49  Aligned_cols=136  Identities=12%  Similarity=0.043  Sum_probs=75.2

Q ss_pred             EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      .....+++||..+......    .+.+++..+++........        .....++|+++.+++...     ++     
T Consensus        83 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~v~~~-----~~-----  140 (287)
T d1pgua2          83 PKVASANNDGFTAVLTNDD----DLLILQSFTGDIIKSVRLN--------SPGSAVSLSQNYVAVGLE-----EG-----  140 (287)
T ss_dssp             EEEEEECSSSEEEEEETTS----EEEEEETTTCCEEEEEECS--------SCEEEEEECSSEEEEEET-----TT-----
T ss_pred             eeeeeeccCCceEEEeecc----cceeeeccceeeeeecccc--------ceeeeeeccCcceeeecc-----cc-----
Confidence            3457788998855544333    2778888777765444322        224678999998874333     33     


Q ss_pred             cccEEEEEEcCCCCcccCCCccccc-CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccc
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLT-RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLT  407 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~  407 (790)
                        ..+.++++...+     ....+. .....+.. ++|+||+++|+....++     .+...++..  ++.  +...   
T Consensus       141 --~~v~~~~~~~~~-----~~~~~~~~~~~~v~~-~~~s~~~~~l~~g~~dg-----~i~i~d~~~--~~~--~~~~---  200 (287)
T d1pgua2         141 --NTIQVFKLSDLE-----VSFDLKTPLRAKPSY-ISISPSETYIAAGDVMG-----KILLYDLQS--REV--KTSR---  200 (287)
T ss_dssp             --SCEEEEETTEEE-----EEEECSSCCSSCEEE-EEECTTSSEEEEEETTS-----CEEEEETTT--TEE--EECC---
T ss_pred             --ceeeeeeccccc-----eeeeeeeccCCceeE-EEeccCccccccccccc-----cccceeecc--ccc--cccc---
Confidence              136667765433     011222 12223343 78999999887776663     455556544  221  1110   


Q ss_pred             cCCCcccEEEEEEecCCcE
Q psy463          408 SANQKCSYSGATFSTNVSY  426 (790)
Q Consensus       408 ~~~~~~~~~~~~~s~dg~~  426 (790)
                      .......+..++|+|+++.
T Consensus       201 ~~~h~~~v~~~~~~p~~~~  219 (287)
T d1pgua2         201 WAFRTSKINAISWKPAEKG  219 (287)
T ss_dssp             SCCCSSCEEEEEECCCC--
T ss_pred             ccccccccceeeecccccc
Confidence            0113445677888887654

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.68  E-value=1.8  Score=40.60  Aligned_cols=133  Identities=12%  Similarity=0.109  Sum_probs=68.8

Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL  352 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l  352 (790)
                      +.+.+...+.+.......  .     .....+++||+.|+ +.+    .+|        .|.++|+..++     ....+
T Consensus       159 i~~~d~~~~~~~~~~~~~--~-----~~~~~~~~~~~~l~-s~~----~dg--------~i~~~d~~~~~-----~~~~~  213 (342)
T d2ovrb2         159 VKVWDPETETCLHTLQGH--T-----NRVYSLQFDGIHVV-SGS----LDT--------SIRVWDVETGN-----CIHTL  213 (342)
T ss_dssp             EEEEEGGGTEEEEEECCC--S-----SCEEEEEECSSEEE-EEE----TTS--------CEEEEETTTCC-----EEEEE
T ss_pred             EEEeecccceeeEEEcCc--c-----cccccccCCCCEEE-EEe----CCC--------eEEEeecccce-----eeeEe
Confidence            667776655543322211  1     23566788999877 555    456        58889988776     13333


Q ss_pred             cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463          353 TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSC  431 (790)
Q Consensus       353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  431 (790)
                      ......+.   +++++++.|+..+.++     .|+..++..  .+. ..+...    .......  ..++.++++++...
T Consensus       214 ~~~~~~v~---~~~~~~~~l~s~s~d~-----~i~iwd~~~--~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~s~s  277 (342)
T d2ovrb2         214 TGHQSLTS---GMELKDNILVSGNADS-----TVKIWDIKT--GQCLQTLQGP----NKHQSAV--TCLQFNKNFVITSS  277 (342)
T ss_dssp             CCCCSCEE---EEEEETTEEEEEETTS-----CEEEEETTT--CCEEEEECST----TSCSSCE--EEEEECSSEEEEEE
T ss_pred             ccccccee---EEecCCCEEEEEcCCC-----EEEEEeccc--cccccccccc----ceeeece--eecccCCCeeEEEc
Confidence            33332232   3445566666655553     455556544  222 122110    0012222  34555566664432


Q ss_pred             ecCCCCeEEEEecCCCeE
Q psy463          432 IGPGIPEIMLFDKTGQRL  449 (790)
Q Consensus       432 ~~~~~~~i~~~~~~~~~~  449 (790)
                       .  -..|.++|+.+++.
T Consensus       278 -~--Dg~i~iwd~~tg~~  292 (342)
T d2ovrb2         278 -D--DGTVKLWDLKTGEF  292 (342)
T ss_dssp             -T--TSEEEEEETTTCCE
T ss_pred             -C--CCEEEEEECCCCCE
Confidence             2  25688999876543

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=1.6  Score=39.86  Aligned_cols=85  Identities=11%  Similarity=0.042  Sum_probs=46.8

Q ss_pred             EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc-
Q psy463          273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP-  351 (790)
Q Consensus       273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~-  351 (790)
                      +...+..+++........  .     ..-..+++++..++ +..    .+|        .|.++|+.+.+      ... 
T Consensus       160 i~~~d~~~~~~~~~~~~~--~-----~~v~~~~~~~~~l~-~~~----~dg--------~i~i~d~~~~~------~~~~  213 (293)
T d1p22a2         160 IKVWNTSTCEFVRTLNGH--K-----RGIACLQYRDRLVV-SGS----SDN--------TIRLWDIECGA------CLRV  213 (293)
T ss_dssp             EEEEETTTCCEEEEEECC--S-----SCEEEEEEETTEEE-EEE----TTS--------CEEEEETTTCC------EEEE
T ss_pred             eeeecCCCCcEEEEEccc--c-----cccccccCCCCeEE-Eec----CCC--------EEEEEecccce------eeee
Confidence            788888877654433321  1     11234566677666 444    456        57888987765      322 


Q ss_pred             ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463          352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI  389 (790)
Q Consensus       352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~  389 (790)
                      .......+   ..+++++..|+..+.++.   ..||.+
T Consensus       214 ~~~~~~~v---~~~~~~~~~l~sg~~dg~---i~iwd~  245 (293)
T d1p22a2         214 LEGHEELV---RCIRFDNKRIVSGAYDGK---IKVWDL  245 (293)
T ss_dssp             ECCCSSCE---EEEECCSSEEEEEETTSC---EEEEEH
T ss_pred             ecccceee---eeccccceEEEEEcCCCE---EEEEEC
Confidence            22222222   346778887766665543   455543

>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acylamino-acid-releasing enzyme, C-terminal donain
domain: Acylamino-acid-releasing enzyme, C-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=91.86  E-value=0.25  Score=45.69  Aligned_cols=58  Identities=21%  Similarity=0.232  Sum_probs=46.8

Q ss_pred             CchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhccccc
Q psy463          641 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYM  699 (790)
Q Consensus       641 ~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~  699 (790)
                      .....+...++...+++++ .|+|++||+.|..||+.++..+.++|+..+...+...|.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~-~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~  231 (260)
T d2hu7a2         174 GSREIMRSRSPINHVDRIK-EPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIP  231 (260)
T ss_dssp             SCHHHHHHTCGGGCGGGCC-SCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEET
T ss_pred             cccccccccchhhcccccC-CCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEEC
Confidence            3456677778888888887 799999999999999999999999999887664444443

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=91.50  E-value=3.8  Score=35.18  Aligned_cols=123  Identities=12%  Similarity=0.153  Sum_probs=70.2

Q ss_pred             ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463          204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC  283 (790)
Q Consensus       204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~  283 (790)
                      ..+|..|+.+|.      .+-+|                 ..++....+..+|+.|.+.-..... ......+|..++..
T Consensus       167 ~sfF~adl~SG~------lri~t-----------------pkeGS~~~ay~~~gnKV~sdyEt~g-Esywit~D~~s~~y  222 (313)
T d2hu7a1         167 VSLFTSNLSSGG------LRVFD-----------------SGEGSFSSASISPGMKVTAGLETAR-EARLVTVDPRDGSV  222 (313)
T ss_dssp             EEEEEEETTTEE------EEEEC-----------------CSSEEEEEEEECTTSCEEEEEEESS-CEEEEEECTTTCCE
T ss_pred             ceEEEEecccCC------EEEec-----------------CCCCcccceeEccCceeeeccCCCC-ceEEEEEecccCce
Confidence            458888997776      45555                 6678889999999999633222222 22333679888876


Q ss_pred             eEEEEEeCCCccccc-CCcee---EccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE
Q psy463          284 DVVFSRDLDRGWFEP-FDHLR---FSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV  359 (790)
Q Consensus       284 ~~l~~~~~~~~~~~~-~~~~~---~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~  359 (790)
                      .++--..  ..+... ...+.   +.||++-++ ++.    ++|      ...|+.    .|+        .+.......
T Consensus       223 erve~P~--kd~~sy~p~~I~~~~Y~Pdd~L~i-iak----rdG------~s~lF~----nGk--------~in~p~G~~  277 (313)
T d2hu7a1         223 EDLELPS--KDFSSYRPTAITWLGYLPDGRLAV-VAR----REG------RSAVFI----DGE--------RVEAPQGNH  277 (313)
T ss_dssp             EECCCSS--CHHHHHCCSEEEEEEECTTSCEEE-EEE----ETT------EEEEEE----TTE--------EECCCSSEE
T ss_pred             eeeecCc--ccceeecceEEEeeeeCCCCcEEE-EEe----cCC------chheee----cce--------EecCCCCcc
Confidence            5442211  000000 11233   689998544 443    678      666653    233        222223334


Q ss_pred             eEEEeeecCCCEEEEEEcC
Q psy463          360 TEILAWDEKENNVYFLSTQ  378 (790)
Q Consensus       360 ~~~~~~s~dg~~l~~~~~~  378 (790)
                      .+...|   +..|||....
T Consensus       278 ~gat~i---~~~iyfshsS  293 (313)
T d2hu7a1         278 GRVVLW---RGKLVTSHTS  293 (313)
T ss_dssp             EEEEEE---TTEEEEEEEE
T ss_pred             cceEEE---CCEEEEeecc
Confidence            444566   4568988766

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=90.36  E-value=3.2  Score=40.30  Aligned_cols=29  Identities=14%  Similarity=0.154  Sum_probs=20.2

Q ss_pred             CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcC
Q psy463          299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLD  339 (790)
Q Consensus       299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~  339 (790)
                      .+....||||++++ ...    . .      -.++-++|++
T Consensus       277 PHGV~vSPDGKyi~-VaG----K-L------s~tVSViD~~  305 (459)
T d1fwxa2         277 PHGCNMAPDKKHLC-VAG----K-L------SPTVTVLDVT  305 (459)
T ss_dssp             CCCEEECTTSSEEE-EEC----T-T------SSBEEEEEGG
T ss_pred             CCceEECCCCCEEE-EeC----C-c------CCcEEEEEeh
Confidence            35789999999887 343    1 1      2368888874

>d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Triacylglycerol lipase
species: Rhizopus niveus [TaxId: 4844]

Probab=90.15  E-value=0.32  Score=44.90  Aligned_cols=37  Identities=24%  Similarity=0.228  Sum_probs=27.0

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      ..++...++.+.+..+   ..+|.++|||+||.+|..++.
T Consensus       116 ~~~i~~~v~~~~~~~~---~~~i~vtGHSLGGAlA~L~a~  152 (265)
T d1lgya_         116 VNDYFPVVQEQLTAHP---TYKVIVTGHSLGGAQALLAGM  152 (265)
T ss_dssp             HHHHHHHHHHHHHHCT---TCEEEEEEETHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCC---CceEEEEecccchHHHHHHHH
Confidence            4455566666655444   469999999999999977664

>d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Triacylglycerol lipase
species: Rhizomucor miehei [TaxId: 4839]

Probab=89.03  E-value=0.43  Score=44.03  Aligned_cols=37  Identities=19%  Similarity=0.192  Sum_probs=26.4

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      ..++...++.+.++.+   ..+|.++|||+||.+|..++.
T Consensus       115 ~~~i~~~i~~~~~~~~---~~~i~vtGHSLGGAlA~L~a~  151 (265)
T d3tgla_         115 QNELVATVLDQFKQYP---SYKVAVTGHSLGGATVLLCAL  151 (265)
T ss_dssp             HHHHHHHHHHHHHHCT---TSEEEEEEETHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC---CceEEEecccchHHHHHHHHH
Confidence            3445555655555344   479999999999999987664

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=88.90  E-value=9.7  Score=35.92  Aligned_cols=119  Identities=8%  Similarity=0.060  Sum_probs=60.9

Q ss_pred             ccCCc-EEEEEecc--CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccc---------cC
Q psy463          255 ANESV-VAAWVNRV--QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQE---------SD  322 (790)
Q Consensus       255 spDg~-~~~~~~r~--~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~---------~~  322 (790)
                      .+||+ +++..+..  ...-.++..+..+.+.+-+.....  .-.....+.....||. ++++-.+...         -.
T Consensus       107 ~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~--~~~~~pNDv~~~~~g~-fy~Tnd~~~~~~~~~~~e~~~  183 (340)
T d1v04a_         107 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH--KLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHL  183 (340)
T ss_dssp             CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC--TTCSSEEEEEEEETTE-EEEEESCSCCSHHHHHHHHHT
T ss_pred             cCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC--ccccCccceEEecCCC-EEEecCccCcChhhhhhhHhh
Confidence            56888 66666643  223356666665554433322221  1111134677888886 5544321100         00


Q ss_pred             CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463          323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD  393 (790)
Q Consensus       323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~  393 (790)
                      +.    .+..++.++  +++      .+.+..+.....+ ++++||++.||+.....    .+|+++.+.+
T Consensus       184 ~~----~~g~v~~~~--~~~------~~~~~~~l~~pNG-I~~s~d~~~lyVa~t~~----~~i~~y~~~~  237 (340)
T d1v04a_         184 GL----AWSFVTYYS--PND------VRVVAEGFDFANG-INISPDGKYVYIAELLA----HKIHVYEKHA  237 (340)
T ss_dssp             TC----CCEEEEEEC--SSC------EEEEEEEESSEEE-EEECTTSSEEEEEEGGG----TEEEEEEECT
T ss_pred             cC----CceeEEEEc--CCc------eEEEcCCCCccce-eEECCCCCEEEEEeCCC----CeEEEEEeCC
Confidence            10    023455554  444      4343332222234 78999999999988764    3566666654

>d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Triacylglycerol lipase
species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]

Probab=88.53  E-value=0.25  Score=45.86  Aligned_cols=37  Identities=22%  Similarity=0.126  Sum_probs=27.4

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA  603 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~  603 (790)
                      ..++...++.+.++.+   ..+|.++|||+||.+|..++.
T Consensus       121 ~~~v~~~v~~~~~~~~---~~~i~vtGHSLGGalA~l~a~  157 (269)
T d1tiba_         121 ADTLRQKVEDAVREHP---DYRVVFTGHSLGGALATVAGA  157 (269)
T ss_dssp             HHHHHHHHHHHHHHCT---TSEEEEEEETHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC---CcceeeeccchHHHHHHHHHH
Confidence            3455666666665444   369999999999999987775

>d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Feruloyl esterase A
species: Aspergillus niger [TaxId: 5061]

Probab=88.24  E-value=0.26  Score=45.40  Aligned_cols=52  Identities=13%  Similarity=0.063  Sum_probs=33.2

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC--CCCceEEEEEeCC
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD--PSNVFKCGISVAP  618 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~--p~~~~~~~v~~~~  618 (790)
                      ..++...++.+.++++   ..+|.+.|||+||.+|..++..-  ....+++...++|
T Consensus       108 ~~~i~~~i~~~~~~~~---~~~i~vTGHSLGGAlA~L~a~~l~~~~~~~~~~tFG~P  161 (261)
T d1uwca_         108 QDQVESLVKQQASQYP---DYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEP  161 (261)
T ss_dssp             HHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHTTCSSEEEEEESCC
T ss_pred             HHHHHHHHHHHHhhCC---CcceEEeccchhHHHHHHHHHHHHhcCCCcceEEecCc
Confidence            3455666666666444   36899999999999997765321  1124555555555

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.79  E-value=9.7  Score=34.58  Aligned_cols=167  Identities=8%  Similarity=0.017  Sum_probs=78.8

Q ss_pred             EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeC-CCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463          250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDL-DRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD  328 (790)
Q Consensus       250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~-~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~  328 (790)
                      ..++.+|||++ +.+++..  .+|.+++.++.-.+.+-.... ...... .....+.++...+++...     .+     
T Consensus        26 ~gvavd~dg~i-~VaD~~n--~rI~v~d~~G~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~-----~~-----   91 (279)
T d1q7fa_          26 SGVAVNAQNDI-IVADTNN--HRIQIFDKEGRFKFQFGECGKRDSQLLY-PNRVAVVRNSGDIIVTER-----SP-----   91 (279)
T ss_dssp             EEEEECTTCCE-EEEEGGG--TEEEEECTTSCEEEEECCBSSSTTCBSS-EEEEEEETTTTEEEEEEC-----GG-----
T ss_pred             cEEEEcCCCCE-EEEECCC--CEEEEEeCCCCEEEEecccCCCcccccc-cccccccccccccceecc-----CC-----
Confidence            56788999993 3344432  348888876433332211110 001111 112344445444442332     12     


Q ss_pred             cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccccc
Q psy463          329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTS  408 (790)
Q Consensus       329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~  408 (790)
                       ...|.+++..+..      ...+..........++.+++|+ +++.....    ..++.++.++  .....+..     
T Consensus        92 -~~~i~~~~~~g~~------~~~~~~~~~~~p~~~avd~~G~-i~v~~~~~----~~~~~~~~~g--~~~~~~g~-----  152 (279)
T d1q7fa_          92 -THQIQIYNQYGQF------VRKFGATILQHPRGVTVDNKGR-IIVVECKV----MRVIIFDQNG--NVLHKFGC-----  152 (279)
T ss_dssp             -GCEEEEECTTSCE------EEEECTTTCSCEEEEEECTTSC-EEEEETTT----TEEEEECTTS--CEEEEEEC-----
T ss_pred             -ccccccccccccc------eeecCCCcccccceeccccCCc-EEEEeecc----ceeeEeccCC--ceeecccc-----
Confidence             3367777765443      3333222222222366778886 44444332    3566666544  21111111     


Q ss_pred             CCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463          409 ANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW  452 (790)
Q Consensus       409 ~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l  452 (790)
                      ..+......+.+.++|..++...   ....|++++.++..+..+
T Consensus       153 ~~~~~~~~~i~~d~~g~i~v~d~---~~~~V~~~d~~G~~~~~~  193 (279)
T d1q7fa_         153 SKHLEFPNGVVVNDKQEIFISDN---RAHCVKVFNYEGQYLRQI  193 (279)
T ss_dssp             TTTCSSEEEEEECSSSEEEEEEG---GGTEEEEEETTCCEEEEE
T ss_pred             cccccccceeeeccceeEEeeec---cccceeeeecCCceeeee
Confidence            01223445677888886443321   245688888877665544

>d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Triacylglycerol lipase
species: Penicillium camembertii [TaxId: 5075]

Probab=87.74  E-value=0.23  Score=46.08  Aligned_cols=38  Identities=21%  Similarity=0.157  Sum_probs=26.9

Q ss_pred             hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc
Q psy463          564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL  604 (790)
Q Consensus       564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~  604 (790)
                      ..++...++.+.+..+   ..+|.++|||+||.+|..++..
T Consensus       120 ~~~i~~~i~~~~~~~~---~~~i~iTGHSLGGAlA~L~a~~  157 (271)
T d1tiaa_         120 RDDIIKELKEVVAQNP---NYELVVVGHSLGAAVATLAATD  157 (271)
T ss_pred             HHHHHHHHHHHHHhCC---CceEEEeccchHHHHHHHHHHH
Confidence            3455556666555333   4689999999999999877653

>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Prolyl oligopeptidase, C-terminal domain
domain: Prolyl oligopeptidase, C-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.88  E-value=0.65  Score=42.98  Aligned_cols=33  Identities=24%  Similarity=0.130  Sum_probs=29.7

Q ss_pred             CCcEEEEeecCCCccChhhHHHHHHHHHhcCcc
Q psy463          660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM  692 (790)
Q Consensus       660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~  692 (790)
                      ..|+|++||+.|++||+.+++++.++|+..+..
T Consensus       200 ~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~  232 (280)
T d1qfma2         200 YPSMLLLTADHDDRVVPLHSLKFIATLQYIVGR  232 (280)
T ss_dssp             CCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTT
T ss_pred             CCceEEeecccCCCCCHHHHHHHHHHHHHhhhh
Confidence            368999999999999999999999999887654

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=83.32  E-value=19  Score=33.88  Aligned_cols=172  Identities=13%  Similarity=0.154  Sum_probs=77.9

Q ss_pred             ccCCc---EEEEEeccCc--ceEEEEEECCCCceeEEEEEeCC--CcccccCCceeE--ccCCCEEEEEEccccccCCCC
Q psy463          255 ANESV---VAAWVNRVQN--RARITRCSINEGTCDVVFSRDLD--RGWFEPFDHLRF--SSDGKKMLLILSHNQESDGST  325 (790)
Q Consensus       255 spDg~---~~~~~~r~~~--~~~i~~~~~~~g~~~~l~~~~~~--~~~~~~~~~~~~--spDg~~i~~~~~~~~~~~g~~  325 (790)
                      .-+++   +++.++|...  .-.+|.++...+....+......  ..-.+ ....+.  +|++..++.++.   ++.|  
T Consensus        80 ~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~~~~~~~p~~~~~~~-vYGlc~y~~~~~g~~~afv~---~k~G--  153 (353)
T d1h6la_          80 PLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSITDPNRPIASAIDE-VYGFSLYHSQKTGKYYAMVT---GKEG--  153 (353)
T ss_dssp             EETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEECSCSSSCEECSSSS-CCCEEEEECTTTCCEEEEEE---CSSS--
T ss_pred             ccCCcceEEEEEeCCcCcceeEEEEEecCcccccccccccccccccccCc-ceEEEEEecCCCCeEEEEEE---cCCc--
Confidence            33555   5677777643  34567777665544433221000  00011 224444  666444433455   4667  


Q ss_pred             CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463          326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL  405 (790)
Q Consensus       326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~  405 (790)
                          .-..|.+....+........+.+..+ .+..+ ..++++.+.||+.-..     ..+|+++++........+....
T Consensus       154 ----~v~q~~l~~~~~g~v~~~lvr~f~~~-~q~EG-CVvDde~~~LyisEE~-----~Giw~~~a~~~~~~~~~~i~~~  222 (353)
T d1h6la_         154 ----EFEQYELNADKNGYISGKKVRAFKMN-SQTEG-MAADDEYGSLYIAEED-----EAIWKFSAEPDGGSNGTVIDRA  222 (353)
T ss_dssp             ----EEEEEEEEECTTSSEEEEEEEEEECS-SCEEE-EEEETTTTEEEEEETT-----TEEEEEESSTTSCSCCEEEEEC
T ss_pred             ----eEEEEEEEcCCCCceeeEeeeccCCC-Cccce-EEEeCCCCcEEEecCc-----cceEEEEeccCCCccceeeecc
Confidence                44455554433210000012222222 13344 6788888878776443     4678887753223333332111


Q ss_pred             cccCCCcccEEEEEE--ecCCc-EEEEEeecCCCCeEEEEecCC
Q psy463          406 LTSANQKCSYSGATF--STNVS-YYVLSCIGPGIPEIMLFDKTG  446 (790)
Q Consensus       406 ~~~~~~~~~~~~~~~--s~dg~-~~~~~~~~~~~~~i~~~~~~~  446 (790)
                      .. ..-......+++  ..+++ ||+.+..+.  ..+.+++..+
T Consensus       223 ~g-~~l~~D~EGlaiy~~~~~~GylivSsQG~--n~f~vydr~~  263 (353)
T d1h6la_         223 DG-RHLTPDIEGLTIYYAADGKGYLLASSQGN--SSYAIYERQG  263 (353)
T ss_dssp             SS-SSCCSCEEEEEEEECGGGCEEEEEEEGGG--TEEEEEESST
T ss_pred             cC-ccccCCccccEEEEcCCCCeEEEEEcCCC--CeEEEEecCC
Confidence            00 000123344442  34444 777766554  4566666543

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.33  E-value=16  Score=32.31  Aligned_cols=67  Identities=16%  Similarity=0.142  Sum_probs=42.8

Q ss_pred             EEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccE
Q psy463          253 NWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDH  332 (790)
Q Consensus       253 ~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~  332 (790)
                      .+++||++++....+..   |.+.|+.++++...+..  ..+.     -..+++|++.|+ +.+    .+|        .
T Consensus        20 c~~~d~~~l~sgs~Dg~---i~vWd~~~~~~~~~l~~--H~~~-----V~~v~~~~~~l~-s~s----~D~--------~   76 (293)
T d1p22a2          20 CLQYDDQKIVSGLRDNT---IKIWDKNTLECKRILTG--HTGS-----VLCLQYDERVII-TGS----SDS--------T   76 (293)
T ss_dssp             EEECCSSEEEEEESSSC---EEEEESSSCCEEEEECC--CSSC-----EEEEECCSSEEE-EEE----TTS--------C
T ss_pred             EEEEcCCEEEEEeCCCe---EEEEECCCCcEEEEEec--CCCC-----Eeeeecccceee-ccc----ccc--------c
Confidence            46789996665544332   88889999887655532  1111     134567888766 565    456        5


Q ss_pred             EEEEEcCCCC
Q psy463          333 LTFIDLDDQA  342 (790)
Q Consensus       333 l~~~d~~~~~  342 (790)
                      +.++++..+.
T Consensus        77 i~~~~~~~~~   86 (293)
T d1p22a2          77 VRVWDVNTGE   86 (293)
T ss_dssp             EEEEESSSCC
T ss_pred             cccccccccc
Confidence            7788887665

>d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: DPP6 catalytic domain-like
domain: Dipeptidyl peptidase IV/CD26, C-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.82  E-value=1.3  Score=40.32  Aligned_cols=53  Identities=38%  Similarity=0.664  Sum_probs=41.7

Q ss_pred             ccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463          649 AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL  701 (790)
Q Consensus       649 ~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~  701 (790)
                      .++...+++++..|+|++||+.|.+||+.++.++.++|++.+...+...|.+.
T Consensus       178 ~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~  230 (258)
T d2bgra2         178 STVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDE  230 (258)
T ss_dssp             SCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTC
T ss_pred             ccccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence            34455666776689999999999999999999999999998876544444443