Psyllid ID: psy467
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 845 | 2.2.26 [Sep-21-2011] | |||||||
| Q6NVM2 | 655 | Katanin p80 WD40 repeat-c | yes | N/A | 0.140 | 0.181 | 0.561 | 6e-57 | |
| O61585 | 690 | Katanin p80 WD40 repeat-c | yes | N/A | 0.133 | 0.163 | 0.561 | 4e-56 | |
| Q4V7Y7 | 655 | Katanin p80 WD40 repeat-c | N/A | N/A | 0.150 | 0.193 | 0.549 | 1e-55 | |
| Q9BVA0 | 655 | Katanin p80 WD40 repeat-c | yes | N/A | 0.133 | 0.172 | 0.555 | 5e-55 | |
| Q8BG40 | 658 | Katanin p80 WD40 repeat-c | yes | N/A | 0.150 | 0.193 | 0.555 | 5e-55 | |
| Q8H0T9 | 837 | Katanin p80 WD40 repeat-c | yes | N/A | 0.144 | 0.145 | 0.543 | 7e-55 | |
| Q5ZIU8 | 657 | Katanin p80 WD40 repeat-c | yes | N/A | 0.146 | 0.188 | 0.530 | 2e-53 | |
| Q7ZUV2 | 694 | Katanin p80 WD40 repeat-c | yes | N/A | 0.130 | 0.158 | 0.524 | 2e-51 | |
| Q00808 | 1356 | Vegetative incompatibilit | no | N/A | 0.182 | 0.113 | 0.4 | 9e-26 | |
| Q8YRI1 | 1526 | Uncharacterized WD repeat | yes | N/A | 0.353 | 0.195 | 0.272 | 9e-26 |
| >sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 223 bits (568), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 133/162 (82%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AHG+SV+ + LGK SG+++ATGGDD +VNLW++ K NCIMSL+GH+TPVESV+F
Sbjct: 12 KLQEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRF 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
N EE + AG QSGS+++W+L + RTL GHK+++ S+DFHPYGD++ SGSLD+ IKL
Sbjct: 72 NNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ Y+GH++++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKL 173
|
Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Xenopus tropicalis (taxid: 8364) |
| >sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 131/162 (80%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++VNCLALG SG+V+ TGG+DKKVNLWA+GK NCI+SLSGH++PV+SV+F
Sbjct: 8 KLQELVAHSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKF 67
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ EE + AG QSG++KI++L + RTL GH++SI +DFHP+G+++ SGS D+ +KL
Sbjct: 68 NSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKL 127
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCIYTY+GHS +N I+FSPDG+W+ + ED +++
Sbjct: 128 WDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKL 169
|
Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Strongylocentrotus purpuratus (taxid: 7668) |
| >sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 133/162 (82%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AHG SV+ + LG+ SG+++ATGGDD +V+LW++ K NCIMSL+GH+TPVESV+F
Sbjct: 12 KLQEIVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRF 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
N EE + AG QSGS++IW+L + RTL GHK++++S+DFHPYG+++ SGSLD+ IKL
Sbjct: 72 NNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ Y+GH++++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKL 173
|
Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Xenopus laevis (taxid: 8355) |
| >sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
|
Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Microtubule release within the cell body of neurons may be required for their transport into neuronal processes by microtubule-dependent motor proteins. This transport is required for axonal growth. Homo sapiens (taxid: 9606) |
| >sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
|
Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Microtubule release within the cell body of neurons may be required for their transport into neuronal processes by microtubule-dependent motor proteins. This transport is required for axonal growth. Mus musculus (taxid: 10090) |
| >sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 216 bits (549), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++F+AH A+VNCL +G+KS +VL TGG+D KVNLWA+GK N I+SL GHS+ ++SV F
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF 67
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
E ++AG SG+IK+W+L + RTL GH+S+ SVDFHP+G++ SGSLD+ +K+
Sbjct: 68 DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+R+KGCI+TY+GH++ +N +RF+PDG+W+ SGGED +V++
Sbjct: 128 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKV 169
|
May participate in a complex which severs microtubules in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 128/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK +G++LATGGDD +VN+W++ K NC+MSL+GH+TP+ES+Q
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQI 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG ++ SGSLD+ IKL
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+ Y+ H++++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKL 173
|
Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Gallus gallus (taxid: 9031) |
| >sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 127/162 (78%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGG+D +VN+WA+ K NCIMSL+GH++ V +QF
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQF 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ EE + AG SGS+++W+L + RTL GHK+SI+S+DFHP G+YL SGS+DS IKL
Sbjct: 72 NSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ Y+GH++++ + FSPDG+W+AS +D V++
Sbjct: 132 WDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKL 173
|
Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Danio rerio (taxid: 7955) |
| >sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
HG SV +A GQ +A+G DDK + +W C +L GH V+SV F + +
Sbjct: 1008 HGGSVWSVAF-SPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRV 1066
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G +IKIW+ T +TL GH S+ SV F P G + SGS+D IK+WD
Sbjct: 1067 ASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGT 1126
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C T GH ++S+ FSPDGQ +ASG DG ++I
Sbjct: 1127 CTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKI 1161
|
Responsible for vegetative incompatibility through specific interactions with different alleles of the unlinked gene, het-c. Podospora anserina (taxid: 5145) |
| >sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 156/359 (43%), Gaps = 60/359 (16%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H VN +A G LA+G D+ V LW + S C+ L GH++ V SV F TL
Sbjct: 1157 HTNWVNAVAF-SPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTL 1215
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G ++++W + T GH S + SV F+P G L SGS D ++LWD+
Sbjct: 1216 ASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSK 1275
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP 193
C++T++GH+ +NS+ F+PDG +ASG D VR+ + +H
Sbjct: 1276 CLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLW----------EISSSKCLHTF-QG 1324
Query: 194 PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253
+ SSV FS P GT + S+DQ L++ + C
Sbjct: 1325 HTSWVSSVTFS-------------PDGTMLA---------SGSDDQT--VRLWSISSGEC 1360
Query: 254 DY----------SAIFQPHRSLNRSGT------CVPVSVSRTSLSILPQSPMLCFI---- 293
Y S IF P ++ SG+ +S + ++ + + I
Sbjct: 1361 LYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSP 1420
Query: 294 ---LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L S S D+TV W++ + T + +++R + FS G L G D E +K++
Sbjct: 1421 DGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLW 1479
|
Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 845 | ||||||
| 291230364 | 666 | PREDICTED: katanin p80 subunit-like [Sac | 0.150 | 0.190 | 0.672 | 4e-65 | |
| 383848646 | 870 | PREDICTED: katanin p80 WD40-containing s | 0.145 | 0.141 | 0.648 | 1e-62 | |
| 322801278 | 777 | hypothetical protein SINV_07258 [Solenop | 0.147 | 0.160 | 0.662 | 1e-62 | |
| 307186297 | 875 | Katanin p80 WD40-containing subunit B1 [ | 0.151 | 0.146 | 0.648 | 1e-62 | |
| 66519672 | 873 | PREDICTED: katanin p80 WD40-containing s | 0.150 | 0.145 | 0.648 | 2e-62 | |
| 340721896 | 873 | PREDICTED: katanin p80 WD40-containing s | 0.149 | 0.144 | 0.648 | 2e-62 | |
| 332029609 | 879 | Katanin p80 WD40-containing subunit B1 [ | 0.150 | 0.144 | 0.648 | 2e-62 | |
| 380015944 | 790 | PREDICTED: LOW QUALITY PROTEIN: katanin | 0.150 | 0.160 | 0.648 | 2e-62 | |
| 307206419 | 874 | Katanin p80 WD40-containing subunit B1 [ | 0.150 | 0.145 | 0.648 | 2e-62 | |
| 260816181 | 610 | hypothetical protein BRAFLDRAFT_128944 [ | 0.147 | 0.204 | 0.648 | 3e-62 |
| >gi|291230364|ref|XP_002735136.1| PREDICTED: katanin p80 subunit-like [Saccoglossus kowalevskii] | Back alignment and taxonomy information |
|---|
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 109/162 (67%), Positives = 140/162 (86%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K +DF+AH A+VNCLALG KSG+V+ TGG+DKKVN+WA+GK NCIMSLSGH++PVESV+F
Sbjct: 9 KLQDFVAHSANVNCLALGPKSGRVMVTGGEDKKVNMWAVGKPNCIMSLSGHTSPVESVRF 68
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
GN EE ++AG QSG+IKIW+L + RTL GHKSSI ++DFHPYG+++ SGS D+ +KL
Sbjct: 69 GNTEELVAAGSQSGTIKIWDLEAAKIVRTLTGHKSSIQTLDFHPYGEFVASGSFDTNVKL 128
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCIYTYRGH+ INS+RFSPDG+W+AS GEDG+ ++
Sbjct: 129 WDVRRKGCIYTYRGHTNRINSVRFSPDGRWVASAGEDGLAKL 170
|
Source: Saccoglossus kowalevskii Species: Saccoglossus kowalevskii Genus: Saccoglossus Family: Harrimaniidae Order: Class: Enteropneusta Phylum: Hemichordata Superkingdom: Eukaryota |
| >gi|383848646|ref|XP_003699959.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 137/162 (84%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K +DF+AH ++VNCLALG KSG+VL TGGDDKKVNLWA+GK NCIMSLSGH+TP+E V+F
Sbjct: 10 KLQDFVAHSSNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTPIECVRF 69
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
G E+ + AG Q+G++KIW+L + RTL GHK+ I +DFHPYG+ L SGSLD+ IKL
Sbjct: 70 GQTEDLVCAGSQTGALKIWDLEHAKLARTLTGHKAGIRCMDFHPYGELLASGSLDTAIKL 129
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+TY+GH++ +NS++FSPDGQWIAS GE+G+V++
Sbjct: 130 WDIRRKGCIFTYKGHNRMVNSLKFSPDGQWIASAGEEGMVKL 171
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322801278|gb|EFZ21965.1| hypothetical protein SINV_07258 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 106/160 (66%), Positives = 135/160 (84%)
Query: 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN 68
E+F AH +VNCLALG KSG+VL TGGDDKKVNLWA+GK NCIMSLSGH+TP+E V+FG
Sbjct: 1 EEFAAHTPNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTPIECVRFGQ 60
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
E+ + AG Q+G++KIW+L + RTL GHKS I +DFHPYG+ L SGSLD+ IKLWD
Sbjct: 61 TEDLVCAGSQTGALKIWDLEHAKLARTLTGHKSGIRCMDFHPYGELLASGSLDTAIKLWD 120
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+RRKGCI+TY+GH+K++NS++FSPDGQWIAS GE+G+V++
Sbjct: 121 IRRKGCIFTYKGHNKTVNSLKFSPDGQWIASAGEEGMVKL 160
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307186297|gb|EFN71960.1| Katanin p80 WD40-containing subunit B1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 137/162 (84%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++F+AH +VNCLALG KSG+VL TGGDDKKVNLWA+GK NCIMSLSGH+TP+E V+F
Sbjct: 10 KLQEFVAHTPNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTPIECVRF 69
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
G E+ + AG Q+G++KIW+L + RTL GHKS I +DFHPYG+ L SGSLD+ IKL
Sbjct: 70 GQTEDLVCAGSQTGALKIWDLEHAKLARTLTGHKSGIRCMDFHPYGELLASGSLDTAIKL 129
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+TY+GH++++NS++FSPDGQWIAS GE+G+V++
Sbjct: 130 WDIRRKGCIFTYKGHNRTVNSLKFSPDGQWIASAGEEGMVKL 171
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|66519672|ref|XP_393828.2| PREDICTED: katanin p80 WD40-containing subunit B1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 137/162 (84%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K +DF+AH ++VNCLALG KSG+VL TGGDDKKVNLWA+GK NCIMSLSGH+TP+E V+F
Sbjct: 10 KLQDFVAHSSNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTPIECVRF 69
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
G E+ + AG Q+G++KIW+L + RTL GHK+ I +DFHPYG+ L SGSLD+ IKL
Sbjct: 70 GQTEDLVCAGSQTGALKIWDLEHAKLARTLTGHKAGIRCMDFHPYGELLASGSLDTAIKL 129
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+TY+GH++ +NS++FSPDGQWIAS GE+G+V++
Sbjct: 130 WDIRRKGCIFTYKGHNRMVNSLKFSPDGQWIASAGEEGMVKL 171
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340721896|ref|XP_003399349.1| PREDICTED: katanin p80 WD40-containing subunit B1-like isoform 1 [Bombus terrestris] gi|340721898|ref|XP_003399350.1| PREDICTED: katanin p80 WD40-containing subunit B1-like isoform 2 [Bombus terrestris] gi|350407847|ref|XP_003488212.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 137/162 (84%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K +DF+AH ++VNCLALG KSG+VL TGGDDKKVNLWA+GK NCIMSLSGH+TP+E V+F
Sbjct: 10 KLQDFVAHSSNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTPIECVRF 69
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
G E+ + AG Q+G++KIW+L + RTL GHK+ I +DFHPYG+ L SGSLD+ IKL
Sbjct: 70 GQTEDLVCAGSQTGALKIWDLEHAKLARTLTGHKAGIRCMDFHPYGELLASGSLDTAIKL 129
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+TY+GH++ +NS++FSPDGQWIAS GE+G+V++
Sbjct: 130 WDIRRKGCIFTYKGHNRMVNSLKFSPDGQWIASAGEEGMVKL 171
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332029609|gb|EGI69498.1| Katanin p80 WD40-containing subunit B1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 136/162 (83%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++F+AH +VNCLALG KSG+VL TGGDDKKVNLWA+GK NCIMSLSGH+TP+E V+F
Sbjct: 10 KLQEFVAHTPNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTPIECVRF 69
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
G E+ + AG Q+G++KIW+L + RTL GHKS I +DFHPYG+ L SGSLD+ IKL
Sbjct: 70 GQTEDLVCAGSQTGALKIWDLEHAKLARTLTGHKSGIRCMDFHPYGELLASGSLDTAIKL 129
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+TY+GH++ +NS++FSPDGQWIAS GE+G+V++
Sbjct: 130 WDIRRKGCIFTYKGHNRIVNSLKFSPDGQWIASAGEEGMVKL 171
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380015944|ref|XP_003691954.1| PREDICTED: LOW QUALITY PROTEIN: katanin p80 WD40-containing subunit B1-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 137/162 (84%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K +DF+AH ++VNCLALG KSG+VL TGGDDKKVNLWA+GK NCIMSLSGH+TP+E V+F
Sbjct: 10 KLQDFVAHSSNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTPIECVRF 69
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
G E+ + AG Q+G++KIW+L + RTL GHK+ I +DFHPYG+ L SGSLD+ IKL
Sbjct: 70 GQTEDLVCAGSQTGALKIWDLEHAKLARTLTGHKAGIRCMDFHPYGELLASGSLDTAIKL 129
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+TY+GH++ +NS++FSPDGQWIAS GE+G+V++
Sbjct: 130 WDIRRKGCIFTYKGHNRMVNSLKFSPDGQWIASAGEEGMVKL 171
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307206419|gb|EFN84457.1| Katanin p80 WD40-containing subunit B1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 137/162 (84%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++F+AH +VNCLALG KSG+VL TGGDDKKVNLWA+GK NCIMSLSGH+TP+E V+F
Sbjct: 10 KLQEFVAHIPNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTPIECVRF 69
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
G E+ + AG Q+G++KIW+L + RTL GHKS I +DFHPYG+ L SGSLD+ IKL
Sbjct: 70 GQTEDLVCAGSQTGALKIWDLEHAKLARTLTGHKSGIRCMDFHPYGELLASGSLDTAIKL 129
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+TY+GH++++NS++FSPDGQWIAS GE+G+V++
Sbjct: 130 WDIRRKGCIFTYKGHNRTVNSLKFSPDGQWIASAGEEGMVKL 171
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|260816181|ref|XP_002602850.1| hypothetical protein BRAFLDRAFT_128944 [Branchiostoma floridae] gi|229288163|gb|EEN58862.1| hypothetical protein BRAFLDRAFT_128944 [Branchiostoma floridae] | Back alignment and taxonomy information |
|---|
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 139/162 (85%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++F+AHG++VNCLALG KSG+V+ TGG+DKKVN+WA+GK NCIMSLSGH++PVE V+F
Sbjct: 9 KLQEFVAHGSNVNCLALGYKSGRVMVTGGEDKKVNMWAVGKPNCIMSLSGHTSPVECVRF 68
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
GN EE + AG QSGS+KIW+L + RTL GHKS+I S+DFHPYG+++ SGS+D+ IKL
Sbjct: 69 GNAEELVVAGSQSGSLKIWDLEAAKIVRTLTGHKSNIRSLDFHPYGEFVASGSMDTNIKL 128
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+TY+GH+ ++N IRFSPDG+WIAS GED +++
Sbjct: 129 WDVRRKGCIFTYKGHTDAVNCIRFSPDGRWIASAGEDSSLKM 170
|
Source: Branchiostoma floridae Species: Branchiostoma floridae Genus: Branchiostoma Family: Branchiostomidae Order: Class: Phylum: Chordata Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 845 | ||||||
| MGI|MGI:1921437 | 658 | Katnb1 "katanin p80 (WD40-cont | 0.191 | 0.246 | 0.555 | 7.5e-99 | |
| RGD|1311256 | 655 | Katnb1 "katanin p80 (WD repeat | 0.191 | 0.247 | 0.555 | 9.6e-99 | |
| UNIPROTKB|Q9BVA0 | 655 | KATNB1 "Katanin p80 WD40 repea | 0.191 | 0.247 | 0.555 | 9.6e-99 | |
| UNIPROTKB|E2QTQ5 | 655 | KATNB1 "Uncharacterized protei | 0.191 | 0.247 | 0.555 | 2e-98 | |
| UNIPROTKB|Q5ZIU8 | 657 | KATNB1 "Katanin p80 WD40 repea | 0.191 | 0.246 | 0.530 | 3e-98 | |
| UNIPROTKB|A6QQU1 | 663 | KATNB1 "KATNB1 protein" [Bos t | 0.191 | 0.244 | 0.555 | 3.2e-98 | |
| UNIPROTKB|F1P0F4 | 661 | KATNB1 "Katanin p80 WD40 repea | 0.191 | 0.245 | 0.530 | 1.4e-96 | |
| UNIPROTKB|E3W9A3 | 661 | KATNB1 "Katanin p80 WD40 repea | 0.191 | 0.245 | 0.530 | 1.4e-96 | |
| ZFIN|ZDB-GENE-040426-1954 | 694 | katnb1 "katanin p80 (WD repeat | 0.216 | 0.263 | 0.484 | 8e-87 | |
| UNIPROTKB|E1BQV9 | 660 | KATNB1 "Katanin p80 WD40 repea | 0.190 | 0.243 | 0.5 | 2.6e-86 |
| MGI|MGI:1921437 Katnb1 "katanin p80 (WD40-containing) subunit B 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 7.5e-99, Sum P(4) = 7.5e-99
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
|
|
| RGD|1311256 Katnb1 "katanin p80 (WD repeat containing) subunit B 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 9.6e-99, Sum P(4) = 9.6e-99
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
|
|
| UNIPROTKB|Q9BVA0 KATNB1 "Katanin p80 WD40 repeat-containing subunit B1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 9.6e-99, Sum P(4) = 9.6e-99
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
|
|
| UNIPROTKB|E2QTQ5 KATNB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 2.0e-98, Sum P(4) = 2.0e-98
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
|
|
| UNIPROTKB|Q5ZIU8 KATNB1 "Katanin p80 WD40 repeat-containing subunit B1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 519 (187.8 bits), Expect = 3.0e-98, Sum P(4) = 3.0e-98
Identities = 86/162 (53%), Positives = 128/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK +G++LATGGDD +VN+W++ K NC+MSL+GH+TP+ES+Q
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQI 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG ++ SGSLD+ IKL
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+ Y+ H++++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKL 173
|
|
| UNIPROTKB|A6QQU1 KATNB1 "KATNB1 protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 3.2e-98, Sum P(4) = 3.2e-98
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
|
|
| UNIPROTKB|F1P0F4 KATNB1 "Katanin p80 WD40 repeat-containing subunit B1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 519 (187.8 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 86/162 (53%), Positives = 128/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK +G++LATGGDD +VN+W++ K NC+MSL+GH+TP+ES+Q
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQI 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG ++ SGSLD+ IKL
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+ Y+ H++++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKL 173
|
|
| UNIPROTKB|E3W9A3 KATNB1 "Katanin p80 WD40 repeat-containing subunit B1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 519 (187.8 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 86/162 (53%), Positives = 128/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK +G++LATGGDD +VN+W++ K NC+MSL+GH+TP+ES+Q
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQI 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG ++ SGSLD+ IKL
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+ Y+ H++++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKL 173
|
|
| ZFIN|ZDB-GENE-040426-1954 katnb1 "katanin p80 (WD repeat containing) subunit B 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 513 (185.6 bits), Expect = 8.0e-87, Sum P(3) = 8.0e-87
Identities = 91/188 (48%), Positives = 138/188 (73%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGG+D +VN+WA+ K NCIMSL+GH++ V +QF
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQF 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ EE + AG SGS+++W+L + RTL GHK+SI+S+DFHP G+YL SGS+DS IKL
Sbjct: 72 NSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG---ASFHLTNTSIHVVD 183
WD+RRKGC++ Y+GH++++ + FSPDG+W+AS +D V++ A +T + H
Sbjct: 132 WDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSA 191
Query: 184 LSLV--HP 189
+++V HP
Sbjct: 192 VNVVQFHP 199
|
|
| UNIPROTKB|E1BQV9 KATNB1 "Katanin p80 WD40 repeat-containing subunit B1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 474 (171.9 bits), Expect = 2.6e-86, Sum P(4) = 2.6e-86
Identities = 81/162 (50%), Positives = 124/162 (76%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK +G++LATGGDD +VN+W++ + + L+GH+TP+ES+Q
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDL-LTGHTTPIESLQI 70
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG ++ SGSLD+ IKL
Sbjct: 71 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 130
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+ Y+ H++++ +RFSPDG+W+AS +D V++
Sbjct: 131 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKL 172
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 845 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-43 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-41 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-38 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-38 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-25 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-25 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-25 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 6e-24 | |
| pfam13925 | 164 | pfam13925, Katanin_con80, con80 domain of Katanin | 1e-19 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-16 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-11 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 3e-10 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 3e-10 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 5e-10 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 6e-10 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-09 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 6e-07 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-06 | |
| pfam13925 | 164 | pfam13925, Katanin_con80, con80 domain of Katanin | 1e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-04 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 2e-04 | |
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 4e-04 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 0.001 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 0.001 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 0.002 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 0.004 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 159 bits (403), Expect = 2e-43
Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
E H + V+ +A G++L++ DK + +W + C+ +L GH+ V S
Sbjct: 82 TGECVRTLTGHTSYVSSVAF-SPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNS 140
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
V F +++ Q G+IK+W+L TL GH + SV F P G+ L S S D
Sbjct: 141 VAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGT 200
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
IKLWDL C+ T RGH +NS+ FSPDG +ASG EDG +R+
Sbjct: 201 IKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRV 245
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 8e-41
Identities = 61/156 (39%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
H VN +A G +A+ D + LW L C+ +L+GH+ V SV F E
Sbjct: 133 GHTDWVNSVAFSP-DGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEK 191
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
L + G+IK+W+L+ TL GH++ + SV F P G L SGS D I++WDLR
Sbjct: 192 LLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTG 251
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T GH+ S+ S+ +SPDG+ +ASG DG +RI
Sbjct: 252 ECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRI 287
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 1e-38
Identities = 55/141 (39%), Positives = 80/141 (56%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G LA+G DK + LW L C+ +L+GH++ V SV F LS+ + +IK+W++
Sbjct: 63 GTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDV 122
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
TL GH + SV F P G ++ S S D IKLWDLR C+ T GH+ +NS
Sbjct: 123 ETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNS 182
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ FSPDG+ + S DG +++
Sbjct: 183 VAFSPDGEKLLSSSSDGTIKL 203
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 8e-38
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
H V C+A G++LATG D + +W L + +L GH+ PV V
Sbjct: 5 LKGHTGGVTCVAFSP-DGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADG 63
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++G +I++W+L RTL GH S ++SV F P G L S S D IK+WD+
Sbjct: 64 TYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVE 123
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T RGH+ +NS+ FSPDG ++AS +DG +++
Sbjct: 124 TGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKL 161
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 1e-25
Identities = 81/329 (24%), Positives = 126/329 (38%), Gaps = 24/329 (7%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESV 64
+ H SV LA + + D + LW L + +L+GH+ PV S+
Sbjct: 145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSL 204
Query: 65 QF-GNGEETLSAGCQSGSIKIWNLAV-PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122
F +G +++G G+I++W+L+ ++ TL+GH S+ S F P G L SGS D
Sbjct: 205 AFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSS-FSPDGSLLASGSSDG 263
Query: 123 FIKLWDLRRKG-CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-----GASFHLTN 176
I+LWDLR + T GHS S+ S+ FSPDG+ +ASG DG VR+ G
Sbjct: 264 TIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLT 323
Query: 177 TSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236
H V L P S + ++R + K T +
Sbjct: 324 LKGHE---GPVSSLSFSPDGSLLVSGGSDDGTIRLWDLR------TGKPLKTLEGHSNVL 374
Query: 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296
+ + + ++ S SL P L
Sbjct: 375 SVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVT-SLDFSPDGKSLA----- 428
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S+D T+ WDL+ + + +
Sbjct: 429 SGSSDNTIRLWDLKTSLKSVSFSPDGKVL 457
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 110 bits (275), Expect = 2e-25
Identities = 95/348 (27%), Positives = 147/348 (42%), Gaps = 29/348 (8%)
Query: 14 HGASVNCLALGKKSGQVLAT--GGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGE 70
H +SV+ LAL G + D V LW L I +L GHS V S+ F
Sbjct: 108 HDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDG 167
Query: 71 ETL-SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWD 128
+ L S G+IK+W+L TL GH ++S+ F P G + SGS D I+LWD
Sbjct: 168 KLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWD 227
Query: 129 LRRKGCIY-TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV 187
L + T GHS S+ S FSPDG +ASG DG +R+ + L ++S + L
Sbjct: 228 LSTGKLLRSTLSGHSDSVVSS-FSPDGSLLASGSSDGTIRL---WDLRSSSSLLRTL--- 280
Query: 188 HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247
+ SV FS + L G GT D+ + + + E + +
Sbjct: 281 ----SGHSSSVLSVAFSPDGKL---LASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSS 333
Query: 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCF------ILTTSSSAD 301
+P + S + + + + ++ S +L + +S S D
Sbjct: 334 LSFSPDGSLLVS--GGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTD 391
Query: 302 RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
TV WDL SL+ + ++S + L FS G+ L G ++++
Sbjct: 392 GTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLW 439
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 7e-25
Identities = 64/259 (24%), Positives = 95/259 (36%), Gaps = 61/259 (23%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
RTL GH +T V F P G L +GS D IK+WDL + T +GH+ + + S D
Sbjct: 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASAD 62
Query: 154 GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT--PPPQYTSSVPFSHNTSLRK 211
G ++ASG D +R+ DL + T Y SSV FS + +
Sbjct: 63 GTYLASGSSDKTIRL-------------WDLETGECVRTLTGHTSYVSSVAFSPDGRI-- 107
Query: 212 SFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271
+ T K+ + C + + H
Sbjct: 108 -LSSSSRDKT-IKV--------------------WDVETGKCLTT--LRGH---TDWVNS 140
Query: 272 VPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS 331
V S T ++ SSS D T+ WDL V+T ++ + + FS
Sbjct: 141 VAFSPDGTFVA--------------SSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFS 186
Query: 332 EGGECLL--GGDTEGLKVY 348
GE LL D +K++
Sbjct: 187 PDGEKLLSSSSDGT-IKLW 204
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 6e-24
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
H VN +A G+ L + D + LW L C+ +L GH V SV F
Sbjct: 173 LTGHTGEVNSVAF-SPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDG 231
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L++G + G+I++W+L +TL+GH +S+TS+ + P G L SGS D I++WD
Sbjct: 232 YLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|222456 pfam13925, Katanin_con80, con80 domain of Katanin | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 1e-19
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 781 DNVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVD 840
L+LC +LP++++LLQSKYE +I +TL IL+ FGPVI++ + + S+GVD
Sbjct: 59 KESITLDLCVDLLPLVEELLQSKYERHILVGLETLRSILKKFGPVIRSALSAAPSSVGVD 118
Query: 841 ISKEE 845
+S+EE
Sbjct: 119 LSREE 123
|
The con80 domain of katanin is the C-terminal region of the protein that binds to the N-terminal domain of katanin-p60, the catalytic ATPase. The complex associates with a specific subregion of the mitotic spindle leading to increased microtubule disassembly and targeting of p60 to the spindle poles. The assembly and function of the mitotic spindle requires the activity of a number of microtubule-binding proteins. Katanin, a heterodimeric microtubule-severing ATPase, is found localized at mitotic spindle poles. A proposed model is that katanin is targeted to spindle poles through a combination of direct microtubule binding by the p60 subunit and through interactions between the WD40 domain and an unknown protein. Length = 164 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 82.4 bits (202), Expect = 2e-16
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K+ + H V+ L+ +++ G DD + LW L + +L GHS V S
Sbjct: 317 KLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHS-NVLS 375
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
V F +S+G G++++W+L+ ++ R L+GH S +TS+DF P G L SGS D+
Sbjct: 376 VSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNT 435
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
I+LWDL S+ S+ FSPDG+ +AS D V
Sbjct: 436 IRLWDL------------KTSLKSVSFSPDGKVLASKSSDLSV 466
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 67.0 bits (162), Expect = 2e-11
Identities = 81/316 (25%), Positives = 128/316 (40%), Gaps = 35/316 (11%)
Query: 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL--AVPTVQRTLNGHKSSITSVDF- 108
+ L GH + S+ F E L +G G+IK+W+L ++ H SS++ +
Sbjct: 59 LLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALS 118
Query: 109 HPYGDYL--CSGSLDSFIKLWDLRRKG-CIYTYRGHSKSINSIRFSPDGQWIASGGE-DG 164
P G+ + S SLD +KLWDL G I T GHS+S+ S+ FSPDG+ +ASG DG
Sbjct: 119 SPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDG 178
Query: 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR-------KSFTKGR 217
+++ S V L P S + ++R K
Sbjct: 179 TIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTL 238
Query: 218 PGGTKAKI-DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSV 276
G + + + + S G L+ D + R+L+ + V
Sbjct: 239 SGHSDSVVSSFSPDGSLLASGSSDGTIRLW-------DLRSSSSLLRTLSGHSSSV---- 287
Query: 277 SRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE--KFSLVSTTEKNSSTIRRLTFSEGG 334
S++ P +L S S+D TV WDLE K T + + + L+FS G
Sbjct: 288 --LSVAFSPDGKLL-----ASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDG 340
Query: 335 ECLLGGDTEGLKVYGW 350
L+ G ++ + W
Sbjct: 341 SLLVSGGSDDGTIRLW 356
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 63.2 bits (152), Expect = 3e-10
Identities = 60/264 (22%), Positives = 97/264 (36%), Gaps = 27/264 (10%)
Query: 93 QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR-RKGCIYTYRG-HSKSINSIRF 150
L GH+ SITS+ F P G+ L SGS D IKLWDL + I + G H S++ +
Sbjct: 58 SLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLAL 117
Query: 151 -SPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL 209
SPDG I + + L+ + L + +S+ FS
Sbjct: 118 SSPDGNSILLASSSLDGTV-KLWDLSTPGKLIRTL-------EGHSESVTSLAFS--PDG 167
Query: 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE--------EELFATIANPCDYSAIFQP 261
+ + GT D+ + + + + D +
Sbjct: 168 KLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWD 227
Query: 262 HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE-KFSLVSTTEK 320
+ + + S P +L S S+D T+ WDL SL+ T
Sbjct: 228 LSTGKLLRSTLSGHSDSVVSSFSPDGSLL-----ASGSSDGTIRLWDLRSSSSLLRTLSG 282
Query: 321 NSSTIRRLTFSEGGECLLGGDTEG 344
+SS++ + FS G+ L G ++G
Sbjct: 283 HSSSVLSVAFSPDGKLLASGSSDG 306
|
Length = 466 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 3e-10
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T +GH+ + S+ FSPDG+++ASG +DG +++
Sbjct: 4 LLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKL 38
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 5e-10
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T +GH+ + S+ FSPDG +ASG +DG VR+
Sbjct: 3 LLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRV 37
|
Length = 39 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 6e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
+ RTL GH +TSV F P G+ L SGS D +++WD
Sbjct: 2 KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 1e-09
Identities = 21/35 (60%), Positives = 23/35 (65%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
+TL GH +TSV F P G YL SGS D IKLWD
Sbjct: 6 KTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 6e-07
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 51 IMSLSGHSTPVESVQFGNG-EETLSAGCQSGSIKIWNL--------AVPTVQRTLNGHKS 101
++ L GH++ + +QF E L++G + +I++W + + Q L GHK
Sbjct: 67 VIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKK 126
Query: 102 SITSVDFHPYGDY-LCSGSLDSFIKLWDL 129
I+ +D++P Y +CS DSF+ +WD+
Sbjct: 127 KISIIDWNPMNYYIMCSSGFDSFVNIWDI 155
|
Length = 568 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.2 bits (121), Expect = 2e-06
Identities = 56/256 (21%), Positives = 86/256 (33%), Gaps = 51/256 (19%)
Query: 95 TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154
+ + S+ S+ G L + DS + L DL RGH SI SI FSPDG
Sbjct: 22 GPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSS----LLLRGHEDSITSIAFSPDG 77
Query: 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT 214
+ + SG DG +++ + L N + L +H S + S
Sbjct: 78 ELLLSGSSDGTIKL---WDLDNGEKLIKSLEGLHDS------SVSKLALSSPDGNSILLA 128
Query: 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPV 274
GT D++ + + H
Sbjct: 129 SSSLDGTVKLWDLSTPGKL----------------------IRTLEGHSE---------- 156
Query: 275 SVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
S TSL+ P +L + SS D T+ WDL +ST ++ + L FS G
Sbjct: 157 --SVTSLAFSPDGKLLA----SGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDG 210
Query: 335 ECLLGGDTEGLKVYGW 350
L+ + + W
Sbjct: 211 GLLIASGSSDGTIRLW 226
|
Length = 466 |
| >gnl|CDD|222456 pfam13925, Katanin_con80, con80 domain of Katanin | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 12/82 (14%)
Query: 455 GHDKMMAVLRNRQRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDLFKSMLGQGYKK-- 512
HD M++VL +R L +V +++ I A MND V++D+ S+L Q KK
Sbjct: 3 DHDTMLSVLSSRLTKLKVVRTLWRQNDIKGAIAAARRMNDLAVLVDVL-SVLTQSLKKES 61
Query: 513 -----CVKVYNALMPVKSVLLK 529
CV L+P+ LL+
Sbjct: 62 ITLDLCV----DLLPLVEELLQ 79
|
The con80 domain of katanin is the C-terminal region of the protein that binds to the N-terminal domain of katanin-p60, the catalytic ATPase. The complex associates with a specific subregion of the mitotic spindle leading to increased microtubule disassembly and targeting of p60 to the spindle poles. The assembly and function of the mitotic spindle requires the activity of a number of microtubule-binding proteins. Katanin, a heterodimeric microtubule-severing ATPase, is found localized at mitotic spindle poles. A proposed model is that katanin is targeted to spindle poles through a combination of direct microtubule binding by the p60 subunit and through interactions between the WD40 domain and an unknown protein. Length = 164 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 2e-04
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 47 KSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+ +L GH+ PV SV F + L++G G+IK+W+
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 54 LSGHSTPVESVQFGNGEET-LSAGCQSGSIKIWNLAVPTVQRT-------LNGHKSSITS 105
L G P+ V F + L + G+I W + + + L GH +
Sbjct: 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGI 130
Query: 106 VDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164
V FHP + L S D + +WD+ R + + HS I S+ ++ DG + + +D
Sbjct: 131 VSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDK 190
Query: 165 VVRI 168
+ I
Sbjct: 191 KLNI 194
|
Length = 493 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 4e-04
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEETLSAGCQSGSIKIWNLA 88
+LA+G DD V LW++ + I ++ + + VQF +L+ G + ++L
Sbjct: 590 LLASGSDDGSVKLWSINQGVSIGTIKTKAN-ICCVQFPSESGRSLAFGSADHKVYYYDLR 648
Query: 89 VPTVQR-TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR------RKGCIYTYRGH 141
P + T+ GH +++ V F L S S D+ +KLWDL + ++++ GH
Sbjct: 649 NPKLPLCTMIGHSKTVSYVRFVD-SSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGH 707
Query: 142 SKSINSIRFSPDGQWIASGGE 162
+ N + S +IA+G E
Sbjct: 708 TNVKNFVGLSVSDGYIATGSE 728
|
Length = 793 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 0.001
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+ +L GH+ PV SV F L++G G++++W+
Sbjct: 2 KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 80 GSIKIWN-LAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKG---- 133
G+I++ N + P V + L GH SSI + F+P + + L SGS D I++W++
Sbjct: 54 GAIRLENQMRKPPVIK-LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVK 112
Query: 134 ------CIYTYRGHSKSINSIRFSPDGQWI-ASGGEDGVVRI 168
CI +GH K I+ I ++P +I S G D V I
Sbjct: 113 EIKDPQCI--LKGHKKKISIIDWNPMNYYIMCSSGFDSFVNI 152
|
Length = 568 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 36.2 bits (84), Expect = 0.002
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLW 43
H V +A G +LA+G DD V +W
Sbjct: 7 LKGHTGPVTSVAF-SPDGNLLASGSDDGTVRVW 38
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 35.4 bits (82), Expect = 0.004
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLW 43
H V +A G+ LA+G DD + LW
Sbjct: 8 LKGHTGPVTSVAFSP-DGKYLASGSDDGTIKLW 39
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 845 | |||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0267|consensus | 825 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0296|consensus | 399 | 99.98 | ||
| KOG0279|consensus | 315 | 99.98 | ||
| KOG0266|consensus | 456 | 99.97 | ||
| KOG0318|consensus | 603 | 99.97 | ||
| KOG0319|consensus | 775 | 99.97 | ||
| KOG0286|consensus | 343 | 99.97 | ||
| KOG0284|consensus | 464 | 99.97 | ||
| KOG0263|consensus | 707 | 99.97 | ||
| KOG0282|consensus | 503 | 99.97 | ||
| KOG0265|consensus | 338 | 99.97 | ||
| KOG0273|consensus | 524 | 99.97 | ||
| KOG0319|consensus | 775 | 99.97 | ||
| KOG0281|consensus | 499 | 99.97 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.97 | |
| KOG0316|consensus | 307 | 99.97 | ||
| KOG0276|consensus | 794 | 99.97 | ||
| KOG0291|consensus | 893 | 99.97 | ||
| KOG0645|consensus | 312 | 99.96 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| KOG0284|consensus | 464 | 99.96 | ||
| KOG0292|consensus | 1202 | 99.96 | ||
| KOG0266|consensus | 456 | 99.96 | ||
| KOG0293|consensus | 519 | 99.96 | ||
| KOG0295|consensus | 406 | 99.96 | ||
| KOG0306|consensus | 888 | 99.96 | ||
| KOG0291|consensus | 893 | 99.95 | ||
| KOG0315|consensus | 311 | 99.95 | ||
| KOG0292|consensus | 1202 | 99.95 | ||
| KOG0296|consensus | 399 | 99.95 | ||
| KOG0306|consensus | 888 | 99.95 | ||
| KOG0285|consensus | 460 | 99.95 | ||
| KOG0283|consensus | 712 | 99.95 | ||
| KOG1407|consensus | 313 | 99.95 | ||
| KOG0268|consensus | 433 | 99.95 | ||
| KOG0313|consensus | 423 | 99.95 | ||
| KOG0275|consensus | 508 | 99.95 | ||
| KOG0281|consensus | 499 | 99.95 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.95 | |
| KOG1446|consensus | 311 | 99.95 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| KOG0973|consensus | 942 | 99.95 | ||
| KOG0645|consensus | 312 | 99.94 | ||
| KOG0276|consensus | 794 | 99.94 | ||
| KOG0265|consensus | 338 | 99.94 | ||
| KOG0278|consensus | 334 | 99.94 | ||
| KOG0643|consensus | 327 | 99.94 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.94 | |
| KOG0282|consensus | 503 | 99.94 | ||
| KOG0310|consensus | 487 | 99.94 | ||
| KOG0274|consensus | 537 | 99.94 | ||
| KOG0274|consensus | 537 | 99.93 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.93 | |
| KOG1539|consensus | 910 | 99.93 | ||
| KOG0288|consensus | 459 | 99.93 | ||
| KOG0293|consensus | 519 | 99.93 | ||
| KOG0305|consensus | 484 | 99.93 | ||
| KOG0299|consensus | 479 | 99.93 | ||
| KOG0294|consensus | 362 | 99.93 | ||
| KOG0647|consensus | 347 | 99.93 | ||
| KOG0316|consensus | 307 | 99.93 | ||
| KOG0289|consensus | 506 | 99.92 | ||
| KOG0277|consensus | 311 | 99.92 | ||
| KOG0305|consensus | 484 | 99.92 | ||
| KOG0300|consensus | 481 | 99.92 | ||
| KOG0277|consensus | 311 | 99.92 | ||
| KOG0313|consensus | 423 | 99.92 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.91 | |
| KOG0643|consensus | 327 | 99.91 | ||
| KOG1036|consensus | 323 | 99.91 | ||
| KOG1407|consensus | 313 | 99.91 | ||
| KOG0640|consensus | 430 | 99.91 | ||
| KOG0275|consensus | 508 | 99.91 | ||
| KOG0641|consensus | 350 | 99.9 | ||
| KOG0283|consensus | 712 | 99.9 | ||
| KOG0310|consensus | 487 | 99.9 | ||
| KOG0289|consensus | 506 | 99.9 | ||
| KOG0301|consensus | 745 | 99.9 | ||
| KOG0288|consensus | 459 | 99.9 | ||
| KOG0308|consensus | 735 | 99.9 | ||
| KOG0772|consensus | 641 | 99.9 | ||
| KOG0264|consensus | 422 | 99.89 | ||
| KOG1408|consensus | 1080 | 99.89 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.89 | |
| KOG1273|consensus | 405 | 99.89 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.89 | |
| KOG2096|consensus | 420 | 99.89 | ||
| KOG0299|consensus | 479 | 99.88 | ||
| KOG1274|consensus | 933 | 99.88 | ||
| KOG2055|consensus | 514 | 99.88 | ||
| KOG1063|consensus | 764 | 99.87 | ||
| KOG0646|consensus | 476 | 99.87 | ||
| KOG0301|consensus | 745 | 99.87 | ||
| KOG0294|consensus | 362 | 99.86 | ||
| KOG0640|consensus | 430 | 99.86 | ||
| KOG0278|consensus | 334 | 99.86 | ||
| KOG2048|consensus | 691 | 99.86 | ||
| KOG0267|consensus | 825 | 99.86 | ||
| KOG0646|consensus | 476 | 99.86 | ||
| KOG0639|consensus | 705 | 99.86 | ||
| KOG1539|consensus | 910 | 99.85 | ||
| KOG0647|consensus | 347 | 99.85 | ||
| KOG0973|consensus | 942 | 99.85 | ||
| KOG2106|consensus | 626 | 99.85 | ||
| KOG1446|consensus | 311 | 99.85 | ||
| KOG4283|consensus | 397 | 99.85 | ||
| KOG0641|consensus | 350 | 99.84 | ||
| KOG0269|consensus | 839 | 99.84 | ||
| KOG1332|consensus | 299 | 99.84 | ||
| KOG2106|consensus | 626 | 99.84 | ||
| KOG0772|consensus | 641 | 99.84 | ||
| KOG0300|consensus | 481 | 99.84 | ||
| KOG0308|consensus | 735 | 99.83 | ||
| KOG1009|consensus | 434 | 99.83 | ||
| KOG0264|consensus | 422 | 99.83 | ||
| KOG1332|consensus | 299 | 99.82 | ||
| KOG0268|consensus | 433 | 99.82 | ||
| KOG1036|consensus | 323 | 99.82 | ||
| KOG2314|consensus | 698 | 99.82 | ||
| KOG1408|consensus | 1080 | 99.82 | ||
| KOG0269|consensus | 839 | 99.82 | ||
| KOG2445|consensus | 361 | 99.82 | ||
| KOG2048|consensus | 691 | 99.81 | ||
| KOG0650|consensus | 733 | 99.8 | ||
| KOG0302|consensus | 440 | 99.8 | ||
| KOG0321|consensus | 720 | 99.8 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.79 | |
| KOG0321|consensus | 720 | 99.79 | ||
| KOG4328|consensus | 498 | 99.79 | ||
| KOG1273|consensus | 405 | 99.78 | ||
| KOG0270|consensus | 463 | 99.78 | ||
| KOG2445|consensus | 361 | 99.78 | ||
| KOG4378|consensus | 673 | 99.77 | ||
| KOG1274|consensus | 933 | 99.77 | ||
| KOG2096|consensus | 420 | 99.76 | ||
| KOG1063|consensus | 764 | 99.76 | ||
| KOG4283|consensus | 397 | 99.76 | ||
| KOG2055|consensus | 514 | 99.76 | ||
| KOG0302|consensus | 440 | 99.75 | ||
| KOG1034|consensus | 385 | 99.75 | ||
| KOG0642|consensus | 577 | 99.75 | ||
| KOG0639|consensus | 705 | 99.75 | ||
| KOG2919|consensus | 406 | 99.74 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.74 | |
| KOG1963|consensus | 792 | 99.74 | ||
| KOG1034|consensus | 385 | 99.74 | ||
| KOG0307|consensus | 1049 | 99.74 | ||
| KOG4227|consensus | 609 | 99.74 | ||
| KOG1445|consensus | 1012 | 99.72 | ||
| KOG0307|consensus | 1049 | 99.72 | ||
| KOG4378|consensus | 673 | 99.72 | ||
| KOG0644|consensus | 1113 | 99.71 | ||
| KOG1538|consensus | 1081 | 99.71 | ||
| KOG0270|consensus | 463 | 99.7 | ||
| KOG1009|consensus | 434 | 99.69 | ||
| KOG1963|consensus | 792 | 99.67 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.67 | |
| KOG0303|consensus | 472 | 99.66 | ||
| KOG1007|consensus | 370 | 99.66 | ||
| KOG0650|consensus | 733 | 99.66 | ||
| KOG0649|consensus | 325 | 99.66 | ||
| KOG4328|consensus | 498 | 99.66 | ||
| KOG0303|consensus | 472 | 99.65 | ||
| KOG0322|consensus | 323 | 99.65 | ||
| KOG2919|consensus | 406 | 99.64 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.63 | |
| KOG1538|consensus | 1081 | 99.63 | ||
| KOG1007|consensus | 370 | 99.63 | ||
| KOG1188|consensus | 376 | 99.62 | ||
| PF13925 | 164 | Katanin_con80: con80 domain of Katanin | 99.61 | |
| PF13925 | 164 | Katanin_con80: con80 domain of Katanin | 99.6 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.6 | |
| KOG0649|consensus | 325 | 99.6 | ||
| KOG0290|consensus | 364 | 99.59 | ||
| KOG1310|consensus | 758 | 99.59 | ||
| KOG1587|consensus | 555 | 99.59 | ||
| KOG1524|consensus | 737 | 99.57 | ||
| KOG1517|consensus | 1387 | 99.57 | ||
| KOG1272|consensus | 545 | 99.57 | ||
| KOG1334|consensus | 559 | 99.57 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.56 | |
| KOG4227|consensus | 609 | 99.55 | ||
| KOG0771|consensus | 398 | 99.55 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.54 | |
| KOG4497|consensus | 447 | 99.54 | ||
| KOG1587|consensus | 555 | 99.53 | ||
| KOG1523|consensus | 361 | 99.52 | ||
| KOG0290|consensus | 364 | 99.52 | ||
| KOG0642|consensus | 577 | 99.52 | ||
| KOG4497|consensus | 447 | 99.51 | ||
| KOG1445|consensus | 1012 | 99.51 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.51 | |
| KOG1272|consensus | 545 | 99.5 | ||
| KOG1523|consensus | 361 | 99.5 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.5 | |
| KOG0322|consensus | 323 | 99.49 | ||
| KOG1310|consensus | 758 | 99.49 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.48 | |
| KOG2110|consensus | 391 | 99.48 | ||
| KOG2110|consensus | 391 | 99.47 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.46 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.46 | |
| KOG2139|consensus | 445 | 99.46 | ||
| KOG0771|consensus | 398 | 99.46 | ||
| KOG1524|consensus | 737 | 99.45 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.45 | |
| KOG2394|consensus | 636 | 99.45 | ||
| KOG1240|consensus | 1431 | 99.43 | ||
| KOG1188|consensus | 376 | 99.43 | ||
| KOG2394|consensus | 636 | 99.4 | ||
| KOG1517|consensus | 1387 | 99.4 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.39 | |
| KOG2315|consensus | 566 | 99.38 | ||
| KOG0644|consensus | 1113 | 99.38 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.37 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.37 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.37 | |
| KOG2321|consensus | 703 | 99.36 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.35 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.35 | |
| KOG2314|consensus | 698 | 99.33 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.32 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.32 | |
| KOG3881|consensus | 412 | 99.3 | ||
| KOG1334|consensus | 559 | 99.3 | ||
| KOG2139|consensus | 445 | 99.3 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.29 | |
| KOG2111|consensus | 346 | 99.28 | ||
| KOG3881|consensus | 412 | 99.26 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.23 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.22 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.21 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.2 | |
| KOG1240|consensus | 1431 | 99.19 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.18 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.17 | |
| KOG2111|consensus | 346 | 99.17 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.16 | |
| KOG2041|consensus | 1189 | 99.14 | ||
| KOG4547|consensus | 541 | 99.14 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.13 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.11 | |
| KOG1912|consensus | 1062 | 99.11 | ||
| KOG1354|consensus | 433 | 99.09 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.08 | |
| KOG2315|consensus | 566 | 99.05 | ||
| KOG4547|consensus | 541 | 99.04 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.03 | |
| KOG2321|consensus | 703 | 98.99 | ||
| KOG0974|consensus | 967 | 98.98 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.98 | |
| KOG1354|consensus | 433 | 98.98 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.95 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.95 | |
| KOG0280|consensus | 339 | 98.93 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.92 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.91 | |
| KOG4190|consensus | 1034 | 98.89 | ||
| KOG1409|consensus | 404 | 98.89 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.89 | |
| KOG1064|consensus | 2439 | 98.88 | ||
| KOG1064|consensus | 2439 | 98.87 | ||
| KOG0974|consensus | 967 | 98.86 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.77 | |
| KOG2041|consensus | 1189 | 98.77 | ||
| KOG1409|consensus | 404 | 98.75 | ||
| KOG0280|consensus | 339 | 98.72 | ||
| KOG1832|consensus | 1516 | 98.69 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.68 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.68 | |
| KOG0882|consensus | 558 | 98.67 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.67 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.65 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.61 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.6 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.6 | |
| KOG4190|consensus | 1034 | 98.57 | ||
| KOG4649|consensus | 354 | 98.56 | ||
| KOG4532|consensus | 344 | 98.55 | ||
| KOG3914|consensus | 390 | 98.53 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.52 | |
| KOG4532|consensus | 344 | 98.46 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.42 | |
| KOG4714|consensus | 319 | 98.41 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.4 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.4 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.39 | |
| KOG2695|consensus | 425 | 98.39 | ||
| KOG0309|consensus | 1081 | 98.36 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.34 | |
| KOG1912|consensus | 1062 | 98.32 | ||
| KOG0309|consensus | 1081 | 98.31 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.3 | |
| KOG1645|consensus | 463 | 98.3 | ||
| KOG3914|consensus | 390 | 98.3 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.29 | |
| KOG1275|consensus | 1118 | 98.29 | ||
| KOG1275|consensus | 1118 | 98.25 | ||
| KOG1920|consensus | 1265 | 98.22 | ||
| KOG1832|consensus | 1516 | 98.22 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.19 | |
| KOG2066|consensus | 846 | 98.16 | ||
| KOG3617|consensus | 1416 | 98.16 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.07 | |
| KOG2114|consensus | 933 | 98.07 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.07 | |
| KOG2695|consensus | 425 | 98.06 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.04 | |
| KOG4714|consensus | 319 | 98.02 | ||
| KOG3621|consensus | 726 | 98.02 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.0 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 97.99 | |
| KOG0882|consensus | 558 | 97.99 | ||
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 97.98 | |
| KOG4649|consensus | 354 | 97.95 | ||
| KOG2114|consensus | 933 | 97.93 | ||
| KOG2066|consensus | 846 | 97.93 | ||
| KOG1920|consensus | 1265 | 97.9 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.89 | |
| KOG3617|consensus | 1416 | 97.86 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.82 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.79 | |
| KOG1645|consensus | 463 | 97.74 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.72 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.69 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.56 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.56 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.54 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.5 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 97.5 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.48 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.43 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 97.36 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.35 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.32 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.3 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.25 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.22 | |
| KOG3621|consensus | 726 | 97.19 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.19 | |
| KOG1008|consensus | 783 | 97.13 | ||
| KOG4640|consensus | 665 | 97.07 | ||
| KOG4640|consensus | 665 | 97.04 | ||
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.04 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.01 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.82 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 96.82 | |
| KOG1008|consensus | 783 | 96.76 | ||
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 96.76 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 96.75 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.7 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 96.64 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 96.6 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 96.56 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 96.44 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 96.41 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 96.41 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 96.38 | |
| KOG1897|consensus | 1096 | 96.31 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.28 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 96.22 | |
| KOG1897|consensus | 1096 | 96.21 | ||
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.21 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 96.17 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 96.06 | |
| KOG2079|consensus | 1206 | 96.05 | ||
| KOG2395|consensus | 644 | 95.99 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 95.96 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 95.91 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 95.84 | |
| KOG4499|consensus | 310 | 95.62 | ||
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 95.62 | |
| KOG2395|consensus | 644 | 95.6 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 95.59 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 95.53 | |
| KOG1916|consensus | 1283 | 95.47 | ||
| KOG4441|consensus | 571 | 95.36 | ||
| PHA02713 | 557 | hypothetical protein; Provisional | 95.35 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 95.32 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 95.31 | |
| KOG2079|consensus | 1206 | 95.31 | ||
| KOG4499|consensus | 310 | 95.04 | ||
| PRK10115 | 686 | protease 2; Provisional | 95.0 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 94.59 | |
| PRK10115 | 686 | protease 2; Provisional | 94.47 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 94.09 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 94.07 | |
| KOG2444|consensus | 238 | 93.99 | ||
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 93.88 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 93.88 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 93.87 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 93.82 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 93.69 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 93.31 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 93.17 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 93.0 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 92.72 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 92.4 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 92.38 | |
| KOG4441|consensus | 571 | 92.29 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 92.26 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 91.27 | |
| KOG2444|consensus | 238 | 91.02 | ||
| PRK13684 | 334 | Ycf48-like protein; Provisional | 90.64 | |
| KOG3630|consensus | 1405 | 90.07 | ||
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 89.74 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 89.67 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 89.63 | |
| KOG2280|consensus | 829 | 89.55 | ||
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 89.34 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 89.2 | |
| KOG2377|consensus | 657 | 89.16 | ||
| KOG2280|consensus | 829 | 88.78 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 87.68 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 87.0 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 86.68 | |
| KOG3630|consensus | 1405 | 86.64 | ||
| PHA02790 | 480 | Kelch-like protein; Provisional | 86.49 | |
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 86.46 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 86.31 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 86.01 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 85.82 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 85.7 | |
| smart00036 | 302 | CNH Domain found in NIK1-like kinases, mouse citro | 85.58 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 85.3 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 85.08 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 83.36 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 82.9 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 82.34 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 82.02 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 81.76 | |
| KOG2247|consensus | 615 | 81.39 | ||
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 81.12 | |
| KOG1916|consensus | 1283 | 80.86 | ||
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 80.29 |
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=358.32 Aligned_cols=354 Identities=20% Similarity=0.342 Sum_probs=282.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
..+.||.+.|.|++|+| +|..||+|+.|.++++||+.+..+..+.++|...|.|++|+|||+.||+|+.||+|++||.+
T Consensus 109 sS~~GH~e~Vl~~~fsp-~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpk 187 (480)
T KOG0271|consen 109 SSIAGHGEAVLSVQFSP-TGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPK 187 (480)
T ss_pred cccCCCCCcEEEEEecC-CCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCC
Confidence 46889999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEE-EEEcCCCCCeEEEEEcc-----CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC
Q psy467 89 VPTVQ-RTLNGHKSSITSVDFHP-----YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 89 tg~~v-~~l~~h~~~V~~lafsp-----dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
+|+++ ..+.+|...|++++|.| ..++|++++.||.|+|||+..+.++..+.+|..+|+|+.|--+ .++++|+.
T Consensus 188 tg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~ 266 (480)
T KOG0271|consen 188 TGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQ 266 (480)
T ss_pred CCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ceEEecCC
Confidence 98765 67899999999999987 4579999999999999999999999999999999999999854 48999999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCC--CCCCcceeecCCCCeEEEEecCCCCCccceeeE--eeecccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP--PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV--TRIEENAESED 238 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~--~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V--~~i~~~~~~~~ 238 (845)
|++|++ |+...|.+...+. ..++..++++-+--+....-.|.+......-+. ..++.......
T Consensus 267 DrtIkv-------------w~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~ 333 (480)
T KOG0271|consen 267 DRTIKV-------------WRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLK 333 (480)
T ss_pred CceEEE-------------EEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhc
Confidence 999999 9999988855543 344555554432111100000110000000000 00000000000
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT 318 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl 318 (845)
..+ ++ +...... -+.+.|.|............|..-|+.+.||||++ ++|+++-|..|++||.++|+.+.+|
T Consensus 334 ~~~-er-lVSgsDd-~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r-----~IASaSFDkSVkLW~g~tGk~lasf 405 (480)
T KOG0271|consen 334 DSG-ER-LVSGSDD-FTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGR-----YIASASFDKSVKLWDGRTGKFLASF 405 (480)
T ss_pred cCc-ce-eEEecCC-ceEEEecccccccchhhhhchhhheeeEEECCCcc-----EEEEeecccceeeeeCCCcchhhhh
Confidence 000 11 1111111 15567777655333344556778899999999999 9999999999999999999999999
Q ss_pred cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 319 EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 319 ~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
.+|-+.|..++||.|.++|++|+.|. +++|++.+.++...+.+|.+.|.++.|+ ||+.++.+ +.+|.
T Consensus 406 RGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 406 RGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred hhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 99999999999999999999999999 9999999999999999999999999999 99999888 78885
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=372.64 Aligned_cols=247 Identities=46% Similarity=0.864 Sum_probs=229.2
Q ss_pred ceeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 3 irlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
.++|..+.+..|...|.|+..-. .++.+++|+.|..+.+|.+.....+..+.+|..+|.++.|+++..+|++|+.+|+|
T Consensus 16 Lr~~~~~~~~~hsaav~~lk~~~-s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~Llaagsasgti 94 (825)
T KOG0267|consen 16 LRVWDTREFVAHSAAVGCLKIRK-SSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTI 94 (825)
T ss_pred cccccchhhhhhhhhhceeeeec-cceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCce
Confidence 35677789999999999999955 89999999999999999999888899999999999999999999999999999999
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
++||++.++.++++.+|...+..+.|+|.+.+++.|+.|+.+++||++...|.+.+++|...+.+++|+|+|+|++.+++
T Consensus 95 K~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~e 174 (825)
T KOG0267|consen 95 KVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGE 174 (825)
T ss_pred eeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
|..+++ ||...|+. +..|..|... +
T Consensus 175 d~tvki-------------~d~~agk~--------------------~~ef~~~e~~-------v--------------- 199 (825)
T KOG0267|consen 175 DNTVKI-------------WDLTAGKL--------------------SKEFKSHEGK-------V--------------- 199 (825)
T ss_pred cceeee-------------eccccccc--------------------cccccccccc-------c---------------
Confidence 999999 99999888 7778888777 6
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
..+.|+|... ++++|+.|++|++||+++.+.+.......
T Consensus 200 ------------~sle~hp~e~-----------------------------Lla~Gs~d~tv~f~dletfe~I~s~~~~~ 238 (825)
T KOG0267|consen 200 ------------QSLEFHPLEV-----------------------------LLAPGSSDRTVRFWDLETFEVISSGKPET 238 (825)
T ss_pred ------------cccccCchhh-----------------------------hhccCCCCceeeeeccceeEEeeccCCcc
Confidence 6677888877 99999999999999999999998888888
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCEE
Q psy467 323 STIRRLTFSEGGECLLGGDTEGLK 346 (845)
Q Consensus 323 ~~VtslafSpdG~~Lasgs~DGI~ 346 (845)
..|.+.+|+|+|..+++|....+.
T Consensus 239 ~~v~~~~fn~~~~~~~~G~q~sl~ 262 (825)
T KOG0267|consen 239 DGVRSLAFNPDGKIVLSGEQISLS 262 (825)
T ss_pred CCceeeeecCCceeeecCchhhhh
Confidence 899999999999999988776633
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=339.93 Aligned_cols=278 Identities=27% Similarity=0.445 Sum_probs=265.7
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCC--CCEEEEEECCCcEEEEECC
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG--EETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpd--g~~LaSgs~DGtV~VWDl~ 88 (845)
-.|-+.+|..+.||. +++.||||+.+|.++||+..+...+.++.+|...|.++.|+|. +..+|+|+.||++++|+++
T Consensus 171 Q~gd~rPis~~~fS~-ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~ 249 (459)
T KOG0272|consen 171 QVGDTRPISGCSFSR-DSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLS 249 (459)
T ss_pred hccCCCcceeeEeec-CCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccC
Confidence 346678999999999 9999999999999999999999999999999999999999996 5689999999999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+..++..+.+|...|..++|+|+|++|+|++.|.+-++||++++..+....+|...|.+++|.+||.++++|+.|..-++
T Consensus 250 ~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~Rv 329 (459)
T KOG0272|consen 250 QETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRV 329 (459)
T ss_pred CCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhhe
Confidence 98999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||+++|.+ +..+.+|... |
T Consensus 330 -------------WDlRtgr~--------------------im~L~gH~k~-------I--------------------- 348 (459)
T KOG0272|consen 330 -------------WDLRTGRC--------------------IMFLAGHIKE-------I--------------------- 348 (459)
T ss_pred -------------eecccCcE--------------------EEEecccccc-------e---------------------
Confidence 99999999 8899999888 7
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtsl 328 (845)
..+.|+|+|. .||||+.|++++|||++...++.++.+|..-|+.+
T Consensus 349 ------~~V~fsPNGy-----------------------------~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~V 393 (459)
T KOG0272|consen 349 ------LSVAFSPNGY-----------------------------HLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQV 393 (459)
T ss_pred ------eeEeECCCce-----------------------------EEeecCCCCcEEEeeecccccceecccccchhhhe
Confidence 8888999888 99999999999999999999999999999999999
Q ss_pred EEeC-CCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 329 TFSE-GGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 329 afSp-dG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
+|+| .|.+|++++.|+ ++||.-.++.+++++.||.+.|-++.++ |+++|+++ +..|.
T Consensus 394 k~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 394 KYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 9999 799999999999 9999999999999999999999999999 99999988 77774
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=292.16 Aligned_cols=285 Identities=19% Similarity=0.294 Sum_probs=262.7
Q ss_pred ceeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 3 irlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
+++..-+.|+||.+.|.++.|++ +.+++++++.||.+.|||.-+.+..+.+.-....|..++|+|.|+++|+|+.|+..
T Consensus 43 i~~~~rr~LkGH~~Ki~~~~ws~-Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~C 121 (343)
T KOG0286|consen 43 IQMRTRRTLKGHLNKIYAMDWST-DSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKC 121 (343)
T ss_pred eeeeeEEEecccccceeeeEecC-CcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCcee
Confidence 44555688999999999999999 99999999999999999999988888888888999999999999999999999999
Q ss_pred EEEECCCC------cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec-CCC
Q psy467 83 KIWNLAVP------TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP-DGQ 155 (845)
Q Consensus 83 ~VWDl~tg------~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP-dg~ 155 (845)
.||++.+. ...+.+.+|.+.+.|+.|.+| ..|+|++.|.+..+||+++++.+..|.+|.+.|.+++++| +++
T Consensus 122 siy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~n 200 (343)
T KOG0286|consen 122 SIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGN 200 (343)
T ss_pred EEEecccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCC
Confidence 99999854 455678999999999999885 4799999999999999999999999999999999999999 999
Q ss_pred EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 156 WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 156 ~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
.+++|+.|+..++ ||++.+.+ .++|.+|... |
T Consensus 201 tFvSg~cD~~akl-------------WD~R~~~c--------------------~qtF~ghesD-------I-------- 232 (343)
T KOG0286|consen 201 TFVSGGCDKSAKL-------------WDVRSGQC--------------------VQTFEGHESD-------I-------- 232 (343)
T ss_pred eEEecccccceee-------------eeccCcce--------------------eEeecccccc-------c--------
Confidence 9999999999999 99999998 8999999888 7
Q ss_pred ccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l 315 (845)
..+.|.|+|. -+++|+.|++.++||++..+.+
T Consensus 233 -------------------Nsv~ffP~G~-----------------------------afatGSDD~tcRlyDlRaD~~~ 264 (343)
T KOG0286|consen 233 -------------------NSVRFFPSGD-----------------------------AFATGSDDATCRLYDLRADQEL 264 (343)
T ss_pred -------------------ceEEEccCCC-----------------------------eeeecCCCceeEEEeecCCcEE
Confidence 7788888887 8999999999999999999988
Q ss_pred EEecCC--CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 316 STTEKN--SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 316 ~tl~gh--~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
..+... ..+|++++||..|++|++|..|. +.+||.-.++.+..+.+|.+.|+++..+ ||.-++++ +.+|.
T Consensus 265 a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 265 AVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred eeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 888742 45899999999999999999998 9999999999999999999999999999 89888887 88884
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=319.20 Aligned_cols=251 Identities=25% Similarity=0.437 Sum_probs=236.8
Q ss_pred ceeee------eEEeccCCCcEEEEEEecC-CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 3 AKVEK------AEDFMAHGASVNCLALGKK-SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 3 irlw~------l~~L~gH~~~V~~LafSp~-dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
.++|+ +++|.||.+.|.++.|+|. ++..+|||+.||++++|++++...+..+.+|...|..++|+|+|++|++
T Consensus 199 ~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~T 278 (459)
T KOG0272|consen 199 VKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGT 278 (459)
T ss_pred eeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeee
Confidence 56776 5789999999999999996 4779999999999999999998999999999999999999999999999
Q ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCC
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~ 155 (845)
++.|.+-++||+.++..+....+|...|.+++|++||..+++|+.|..-+|||+++++++..+.+|..+|.+++|+|+|.
T Consensus 279 asfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy 358 (459)
T KOG0272|consen 279 ASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGY 358 (459)
T ss_pred cccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCce
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 156 WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 156 ~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
.||+|+.|++++| ||++.... +.++.+|... |
T Consensus 359 ~lATgs~Dnt~kV-------------WDLR~r~~--------------------ly~ipAH~nl-------V-------- 390 (459)
T KOG0272|consen 359 HLATGSSDNTCKV-------------WDLRMRSE--------------------LYTIPAHSNL-------V-------- 390 (459)
T ss_pred EEeecCCCCcEEE-------------eeeccccc--------------------ceecccccch-------h--------
Confidence 9999999999999 99998887 7777788777 6
Q ss_pred ccccccchhhhhhccCCCceeEEEcC-CCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQP-HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fsp-dg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
..+.|+| .|. +|+|++.|++++||...++.+
T Consensus 391 -------------------S~Vk~~p~~g~-----------------------------fL~TasyD~t~kiWs~~~~~~ 422 (459)
T KOG0272|consen 391 -------------------SQVKYSPQEGY-----------------------------FLVTASYDNTVKIWSTRTWSP 422 (459)
T ss_pred -------------------hheEecccCCe-----------------------------EEEEcccCcceeeecCCCccc
Confidence 7777877 344 999999999999999999999
Q ss_pred EEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 315 VSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 315 l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
++++.||.+.|.++.+++|++++++++.|. +++|.
T Consensus 423 ~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 423 LKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred chhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 999999999999999999999999999999 99995
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=311.27 Aligned_cols=293 Identities=22% Similarity=0.342 Sum_probs=242.3
Q ss_pred cceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE-EEecCCCCCeEEEEEcC-----C
Q psy467 2 RAKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI-MSLSGHSTPVESVQFGN-----G 69 (845)
Q Consensus 2 ~irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i-~~l~~h~~~V~sLafSp-----d 69 (845)
++|+|++ ++.++|...|.|++|+| ||..||+|+.||+|++||..+++++ ..+.+|...|++++|.| .
T Consensus 138 TvR~WD~~TeTp~~t~KgH~~WVlcvawsP-Dgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~ 216 (480)
T KOG0271|consen 138 TVRLWDLDTETPLFTCKGHKNWVLCVAWSP-DGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPP 216 (480)
T ss_pred eEEeeccCCCCcceeecCCccEEEEEEECC-CcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCC
Confidence 5789985 67899999999999999 9999999999999999999888765 67899999999999976 5
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEE
Q psy467 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149 (845)
Q Consensus 70 g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLa 149 (845)
.++||+++.||.|+|||+..++++..+.+|+.+|+|++|--+| ++++|+.|++|++|+...|.+.+.+++|...|+.++
T Consensus 217 ~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~la 295 (480)
T KOG0271|consen 217 CRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLA 295 (480)
T ss_pred ccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcccchheeeee
Confidence 6799999999999999999999999999999999999997655 899999999999999999999999999999999988
Q ss_pred Ee-----------cCCC-------------------------EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC
Q psy467 150 FS-----------PDGQ-------------------------WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP 193 (845)
Q Consensus 150 fS-----------Pdg~-------------------------~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~ 193 (845)
++ |.++ .+++|+.|.++.+|..+...... .-.+|.
T Consensus 296 lsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi----~rmtgH----- 366 (480)
T KOG0271|consen 296 LSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPI----TRMTGH----- 366 (480)
T ss_pred ccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccch----hhhhch-----
Confidence 77 2233 49999999999998766543221 111222
Q ss_pred CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccc
Q psy467 194 PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVP 273 (845)
Q Consensus 194 ~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~ 273 (845)
..-+..+.|+||+++++...-.. .+.+|+.. +|+. ......
T Consensus 367 -q~lVn~V~fSPd~r~IASaSFDk------SVkLW~g~------------------------------tGk~--lasfRG 407 (480)
T KOG0271|consen 367 -QALVNHVSFSPDGRYIASASFDK------SVKLWDGR------------------------------TGKF--LASFRG 407 (480)
T ss_pred -hhheeeEEECCCccEEEEeeccc------ceeeeeCC------------------------------Ccch--hhhhhh
Confidence 34577899999999888643211 11121111 1110 111223
Q ss_pred cccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 274 VSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 274 ~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
|...|+.++|+.|.+ +|++|+.|.++++||+++.++...+.+|...|.++.|+|||..+++|+.|. +++|.
T Consensus 408 Hv~~VYqvawsaDsR-----LlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 408 HVAAVYQVAWSADSR-----LLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ccceeEEEEeccCcc-----EEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 556788888888888 999999999999999999999999999999999999999999999999999 99984
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=290.14 Aligned_cols=286 Identities=24% Similarity=0.369 Sum_probs=250.8
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC-----CCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG-----KSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ 78 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~-----t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~ 78 (845)
.+....++++|.+.|+.++..+.+.+.+++++.|.++.+|++. .|..++.+.+|...|..+..++||++.++++.
T Consensus 4 ~l~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 4 QLVLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred hheeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc
Confidence 3445568999999999999999778999999999999999874 46778999999999999999999999999999
Q ss_pred CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCC--CCCeEEEEEecC--C
Q psy467 79 SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH--SKSINSIRFSPD--G 154 (845)
Q Consensus 79 DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h--~~~V~sLafSPd--g 154 (845)
|+++++||+.+++..+.|.+|...|.+++|++|++.+++|+.|.+|++|++. +.+..++..+ ..-|.|++|+|+ .
T Consensus 84 D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~ 162 (315)
T KOG0279|consen 84 DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESN 162 (315)
T ss_pred cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCC
Confidence 9999999999999999999999999999999999999999999999999997 4566666544 688999999997 6
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
.+|++++.|+++++ ||+++.+. ...+.+|... +
T Consensus 163 p~Ivs~s~DktvKv-------------Wnl~~~~l--------------------~~~~~gh~~~-------v------- 195 (315)
T KOG0279|consen 163 PIIVSASWDKTVKV-------------WNLRNCQL--------------------RTTFIGHSGY-------V------- 195 (315)
T ss_pred cEEEEccCCceEEE-------------EccCCcch--------------------hhcccccccc-------E-------
Confidence 78999999999999 99998887 5666677666 5
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
+.++++|||. ++++|+.||.+.+||++.++.
T Consensus 196 --------------------~t~~vSpDGs-----------------------------lcasGgkdg~~~LwdL~~~k~ 226 (315)
T KOG0279|consen 196 --------------------NTVTVSPDGS-----------------------------LCASGGKDGEAMLWDLNEGKN 226 (315)
T ss_pred --------------------EEEEECCCCC-----------------------------EEecCCCCceEEEEEccCCce
Confidence 6677777776 999999999999999999999
Q ss_pred EEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecCC---------CCCeEEEEEc-CCceEEEE----
Q psy467 315 VSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMG---------WGKVQDLAVT-GTQLWFRR---- 380 (845)
Q Consensus 315 l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~h---------~~~VtsVafS-dg~lLaaS---- 380 (845)
+..+. |...|.+++|+|+.-+|+.+...+|+|||++++.++..+... .-...+++|+ ||+.|+++
T Consensus 227 lysl~-a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~ 305 (315)
T KOG0279|consen 227 LYSLE-AFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDN 305 (315)
T ss_pred eEecc-CCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCC
Confidence 88876 578999999999998998888888999999999888766432 1234678899 99999998
Q ss_pred -EEEEeeC
Q psy467 381 -VGTWSHQ 387 (845)
Q Consensus 381 -VsiW~~d 387 (845)
+.+|.+.
T Consensus 306 ~irv~qv~ 313 (315)
T KOG0279|consen 306 VIRVWQVA 313 (315)
T ss_pred cEEEEEee
Confidence 8899753
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=295.90 Aligned_cols=274 Identities=22% Similarity=0.407 Sum_probs=250.5
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
..|++++|+. +|++||+|+.||.++||+. +|..+.++..|.++|.++.|+.+|+||++++.|+++.+||..++...+.
T Consensus 236 kdVT~L~Wn~-~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~ 313 (524)
T KOG0273|consen 236 KDVTSLDWNN-DGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQ 313 (524)
T ss_pred CCcceEEecC-CCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEe
Confidence 5799999998 9999999999999999996 5788899999999999999999999999999999999999999999999
Q ss_pred EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccC
Q psy467 96 LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLT 175 (845)
Q Consensus 96 l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~ 175 (845)
+.-|..+...+.|-.+ ..|++++.||.|+++.+....++.++.+|.++|.++.|.|.|.+|++++.|+++++
T Consensus 314 f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~Tlki------- 385 (524)
T KOG0273|consen 314 FEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKI------- 385 (524)
T ss_pred eeeccCCccceEEecC-ceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEe-------
Confidence 9989888788899754 57999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCce
Q psy467 176 NTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDY 255 (845)
Q Consensus 176 ~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 255 (845)
|.+..... ...+.+|... | +
T Consensus 386 ------Ws~~~~~~--------------------~~~l~~Hske-------i---------------------------~ 405 (524)
T KOG0273|consen 386 ------WSMGQSNS--------------------VHDLQAHSKE-------I---------------------------Y 405 (524)
T ss_pred ------eecCCCcc--------------------hhhhhhhccc-------e---------------------------e
Confidence 99887777 6667788777 7 8
Q ss_pred eEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCC
Q psy467 256 SAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE 335 (845)
Q Consensus 256 ~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~ 335 (845)
.+.|+|.+. +.++|..+. .+++++.|++|++||+..+.++++|..|..+|.+++|||+|+
T Consensus 406 t~~wsp~g~----------------v~~n~~~~~----~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ 465 (524)
T KOG0273|consen 406 TIKWSPTGP----------------VTSNPNMNL----MLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGR 465 (524)
T ss_pred eEeecCCCC----------------ccCCCcCCc----eEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCc
Confidence 889999887 344555442 789999999999999999999999999999999999999999
Q ss_pred EEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 336 CLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 336 ~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
++|+|+.|| |.+|+.++++.++.+.+ .+.|..++|+ +|..|.++
T Consensus 466 ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~ 511 (524)
T KOG0273|consen 466 YLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKLGAC 511 (524)
T ss_pred EEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCCCEEEEE
Confidence 999999999 99999999999998875 4569999999 88888877
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=278.36 Aligned_cols=280 Identities=30% Similarity=0.540 Sum_probs=248.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
+++|.+|.+.|++++|+| ++++|++++.||.|++|++.+++....+..|...+..+.|++++++|++++.+|.|.+||+
T Consensus 2 ~~~~~~h~~~i~~~~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~ 80 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSP-DGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDL 80 (289)
T ss_pred chHhcccCCCEEEEEEcC-CCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEc
Confidence 356889999999999999 8999999999999999999988888889999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
.+++.+..+..|...+.++.|+++++++++++.+|.|.+||+.+++....+..|...+.+++|+|++.++++++.|+.++
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 160 (289)
T cd00200 81 ETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIK 160 (289)
T ss_pred CcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEE
Confidence 99888888888998999999999988888888899999999998899999988999999999999999998888899999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ ||+++++. +..+..+... +
T Consensus 161 i-------------~d~~~~~~--------------------~~~~~~~~~~-------i-------------------- 180 (289)
T cd00200 161 L-------------WDLRTGKC--------------------VATLTGHTGE-------V-------------------- 180 (289)
T ss_pred E-------------EEcccccc--------------------ceeEecCccc-------c--------------------
Confidence 9 99987665 4444333323 3
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts 327 (845)
..+.|++++. .+++++.|+.|++||+.+++.+..+..|...+.+
T Consensus 181 -------~~~~~~~~~~-----------------------------~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~ 224 (289)
T cd00200 181 -------NSVAFSPDGE-----------------------------KLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNS 224 (289)
T ss_pred -------ceEEECCCcC-----------------------------EEEEecCCCcEEEEECCCCceecchhhcCCceEE
Confidence 4555555554 7888888999999999999999999889899999
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEE
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTW 384 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW 384 (845)
++|++++.++++++.++ |++|++.+++.+..+..|...|.+++|+ ++.+++++ +.+|
T Consensus 225 ~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw 288 (289)
T cd00200 225 VAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIW 288 (289)
T ss_pred EEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEec
Confidence 99999999999988788 9999999999999999999999999999 77777766 7776
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=292.44 Aligned_cols=294 Identities=22% Similarity=0.349 Sum_probs=261.0
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
+.+.+|..+|+.+-|+| +-.+++++++|++|++||..++++...+++|.+.|..++|+..|++||+++.|-.+.+||.+
T Consensus 102 ~~l~g~r~~vt~v~~hp-~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~ 180 (406)
T KOG0295|consen 102 QKLAGHRSSVTRVIFHP-SEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFD 180 (406)
T ss_pred hhhhccccceeeeeecc-CceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHH
Confidence 56789999999999999 88999999999999999999999999999999999999999999999999999999999998
Q ss_pred C-CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 89 V-PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 89 t-g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
+ .++++.+.+|+..|.+++|-|.|.++++++.|.+|+.|++.++.++.++.+|..-|..++.+.||..+|+++.|.+++
T Consensus 181 ~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~ 260 (406)
T KOG0295|consen 181 TFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLR 260 (406)
T ss_pred HHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEE
Confidence 7 577788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ |-+.++.+ ...+..|... +
T Consensus 261 v-------------W~~~t~~~--------------------k~~lR~hEh~-------v-------------------- 280 (406)
T KOG0295|consen 261 V-------------WVVATKQC--------------------KAELREHEHP-------V-------------------- 280 (406)
T ss_pred E-------------EEeccchh--------------------hhhhhccccc-------e--------------------
Confidence 9 99999877 5556666666 5
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC-CCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP-QSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP-dg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vt 326 (845)
.+++|.|.... ..|....=+. .++ ++++++.|++|++||+.++.++.++.+|..+|.
T Consensus 281 -------Eci~wap~~~~----------~~i~~at~~~~~~~-----~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr 338 (406)
T KOG0295|consen 281 -------ECIAWAPESSY----------PSISEATGSTNGGQ-----VLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVR 338 (406)
T ss_pred -------EEEEecccccC----------cchhhccCCCCCcc-----EEEeecccceEEEEeccCCeEEEEEecccceee
Confidence 56666655431 1111111111 223 899999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 327 RLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 327 slafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
.++|+|.|+||+++.+|+ +++||+++.+|..++..|..-|+++.|+ +-.+++++ +.+|-
T Consensus 339 ~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 339 GVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred eeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 999999999999999999 9999999999999999999999999999 55566665 77773
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-30 Score=283.61 Aligned_cols=350 Identities=19% Similarity=0.268 Sum_probs=269.6
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
+-++.||...|++++|-|...-.++||++|++|.+|.-.--+...++..|..-|+|+.|+|||+.+++.+.||+|.+||-
T Consensus 140 vGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDG 219 (603)
T KOG0318|consen 140 VGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDG 219 (603)
T ss_pred cceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcC
Confidence 35789999999999999866678999999999999998777888888999999999999999999999999999999999
Q ss_pred CCCcEEEEEc---CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE--------------------------
Q psy467 88 AVPTVQRTLN---GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-------------------------- 138 (845)
Q Consensus 88 ~tg~~v~~l~---~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-------------------------- 138 (845)
.+|+.+..+. +|.+.|.+++|+||++.|++++.|.+++|||+.+.++++++
T Consensus 220 ktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~ 299 (603)
T KOG0318|consen 220 KTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLS 299 (603)
T ss_pred CCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcC
Confidence 9999999997 89999999999999999999999999999999866544332
Q ss_pred -----------------cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC---CCCCCC
Q psy467 139 -----------------RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT---PPPQYT 198 (845)
Q Consensus 139 -----------------~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~---~~~~~i 198 (845)
.+|...|+++..++|+++|++|+.||.|.- ||..++..-.. .+..++
T Consensus 300 G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~-------------W~~~~g~~~~~~g~~h~nqI 366 (603)
T KOG0318|consen 300 GTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINS-------------WDSGSGTSDRLAGKGHTNQI 366 (603)
T ss_pred cEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEE-------------EecCCccccccccccccceE
Confidence 378999999999999999999999999999 99998876433 345566
Q ss_pred cceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCC-----------cCC
Q psy467 199 SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS-----------LNR 267 (845)
Q Consensus 199 ~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~-----------~~~ 267 (845)
..++.+..+.++..- -... +.+.++....-.. .... .+.. +...++..+++. +++
T Consensus 367 ~~~~~~~~~~~~t~g--~Dd~-----l~~~~~~~~~~t~-----~~~~-~lg~-QP~~lav~~d~~~avv~~~~~iv~l~ 432 (603)
T KOG0318|consen 367 KGMAASESGELFTIG--WDDT-----LRVISLKDNGYTK-----SEVV-KLGS-QPKGLAVLSDGGTAVVACISDIVLLQ 432 (603)
T ss_pred EEEeecCCCcEEEEe--cCCe-----EEEEecccCcccc-----ccee-ecCC-CceeEEEcCCCCEEEEEecCcEEEEe
Confidence 666665544433221 0111 1111110000000 0000 0000 012344444432 111
Q ss_pred ---CCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE--EEEecCCCCCEEEEEEeCCCCEEEEEeC
Q psy467 268 ---SGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL--VSTTEKNSSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 268 ---~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~--l~tl~gh~~~VtslafSpdG~~Lasgs~ 342 (845)
.-..++......++|++|++. .+++|+.|+.|+||.+....+ ......|.++|++++||||+.|||+++.
T Consensus 433 ~~~~~~~~~~~y~~s~vAv~~~~~-----~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da 507 (603)
T KOG0318|consen 433 DQTKVSSIPIGYESSAVAVSPDGS-----EVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDA 507 (603)
T ss_pred cCCcceeeccccccceEEEcCCCC-----EEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEecc
Confidence 112234466778999999999 999999999999999987654 3345579999999999999999999999
Q ss_pred CC-EEEEEecCCceE-EEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 343 EG-LKVYGWEPARQY-DAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 343 DG-I~IWDl~tgk~l-~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
.+ +.+||+.+.+.. ....-|+..|.+++|+ ++.++|++ |.+|.++..
T Consensus 508 ~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP 562 (603)
T KOG0318|consen 508 SRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKP 562 (603)
T ss_pred CCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccCh
Confidence 99 999999998764 3344599999999999 88888877 999987643
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-31 Score=265.37 Aligned_cols=293 Identities=19% Similarity=0.341 Sum_probs=245.9
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc--EEEEEcCCCCCeEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT--VQRTLNGHKSSITS 105 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~--~v~~l~~h~~~V~~ 105 (845)
.-+|++++.|.+|++|...+|.+.++++...+.|+.+...|++..||+++ ...|++||+.++. ++.++.+|.+.|+.
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e~h~kNVta 88 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFEGHTKNVTA 88 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEeccCCceEE
Confidence 35899999999999999999999999998889999999999999999986 5579999999864 68999999999999
Q ss_pred EEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECC
Q psy467 106 VDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLS 185 (845)
Q Consensus 106 lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~ 185 (845)
+.|..+|+++++|++||+++|||++...+.+.+. +..+|+++..+|+...|++|..+|.|++ ||+.
T Consensus 89 VgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irv-------------WDl~ 154 (311)
T KOG0315|consen 89 VGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRV-------------WDLG 154 (311)
T ss_pred EEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEE-------------EEcc
Confidence 9999999999999999999999999977777776 7799999999999999999999999999 9999
Q ss_pred CCccCCCCC---CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCC
Q psy467 186 LVHPLGTPP---PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPH 262 (845)
Q Consensus 186 tg~~l~~~~---~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspd 262 (845)
...+...+. ...++++...|||..+...... + ...+|.+-... ..-.+-|
T Consensus 155 ~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnk---G---~cyvW~l~~~~--------------------~~s~l~P- 207 (311)
T KOG0315|consen 155 ENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNK---G---NCYVWRLLNHQ--------------------TASELEP- 207 (311)
T ss_pred CCccccccCCCCCcceeeEEEcCCCcEEEEecCC---c---cEEEEEccCCC--------------------ccccceE-
Confidence 876655443 4567899999999987764321 1 11233321100 0000111
Q ss_pred CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCCEEEEEEeCCCCEEEEEe
Q psy467 263 RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSSTIRRLTFSEGGECLLGGD 341 (845)
Q Consensus 263 g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~VtslafSpdG~~Lasgs 341 (845)
..+...+...+..+.+|||++ +||+++.|.+++||++++. +.-..+.+|+.++..++||.||+||++|+
T Consensus 208 -----~~k~~ah~~~il~C~lSPd~k-----~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTas 277 (311)
T KOG0315|consen 208 -----VHKFQAHNGHILRCLLSPDVK-----YLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTAS 277 (311)
T ss_pred -----hhheecccceEEEEEECCCCc-----EEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecC
Confidence 112334566778889999999 9999999999999999988 66778889999999999999999999999
Q ss_pred CCC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 342 TEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 342 ~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
.|+ +++|++..++.++...+|.....+++..
T Consensus 278 sd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 278 SDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred CCCceeecccccCceeeecCCcccccEEEEee
Confidence 999 9999999999999999999888787764
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=280.47 Aligned_cols=298 Identities=21% Similarity=0.401 Sum_probs=263.6
Q ss_pred eee-EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 6 EKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 6 w~l-~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
|++ +-+.+|.+.|.|+++.| ..++|++|+.|++|.|||+.++++..++.+|-..|..+++|+-..||++++.|+.|+.
T Consensus 141 wKl~rVi~gHlgWVr~vavdP-~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKC 219 (460)
T KOG0285|consen 141 WKLYRVISGHLGWVRSVAVDP-GNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKC 219 (460)
T ss_pred ceehhhhhhccceEEEEeeCC-CceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEE
Confidence 444 46889999999999999 8899999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
||++..+.++.+.+|-..|.|++.+|.-+.|++|+.|.++++||+++...+..+.+|...|..+.+.|-...+++|+.|+
T Consensus 220 wDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~ 299 (460)
T KOG0285|consen 220 WDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDS 299 (460)
T ss_pred EechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999778899999999
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
+|++ ||++.|+. +.++..|... +
T Consensus 300 tvrl-------------WDl~agkt--------------------~~tlt~hkks-------v----------------- 322 (460)
T KOG0285|consen 300 TVRL-------------WDLRAGKT--------------------MITLTHHKKS-------V----------------- 322 (460)
T ss_pred eEEE-------------eeeccCce--------------------eEeeecccce-------e-----------------
Confidence 9999 99999988 7777777766 6
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~ 324 (845)
.+++.+|... .+|+++.| .|+-|++..+..+..+.+|...
T Consensus 323 ----------ral~lhP~e~-----------------------------~fASas~d-nik~w~~p~g~f~~nlsgh~~i 362 (460)
T KOG0285|consen 323 ----------RALCLHPKEN-----------------------------LFASASPD-NIKQWKLPEGEFLQNLSGHNAI 362 (460)
T ss_pred ----------eEEecCCchh-----------------------------hhhccCCc-cceeccCCccchhhccccccce
Confidence 7777888777 88888877 5999999999999999999999
Q ss_pred EEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec-----C---CCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 325 IRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP-----M---GWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 325 VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~-----~---h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
|++++...|| ++++|+++| +.+||+++|...+... + ....|.+.+|. .|..|.++ +.+|..|..
T Consensus 363 intl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe~ 441 (460)
T KOG0285|consen 363 INTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDEH 441 (460)
T ss_pred eeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecccc
Confidence 9999998886 778899999 9999999986655441 1 23568999999 66666666 999988777
Q ss_pred CCccccCCCCCCC
Q psy467 390 GFSTLDSYSAGSP 402 (845)
Q Consensus 390 ~~~~~~~~~~~~p 402 (845)
.-+.-.|..+.|+
T Consensus 442 aT~EthPl~w~P~ 454 (460)
T KOG0285|consen 442 ATEETHPLNWKPE 454 (460)
T ss_pred cCcccCCcCCCCc
Confidence 6554455554443
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=304.71 Aligned_cols=270 Identities=25% Similarity=0.422 Sum_probs=242.6
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC-------------------------------eeEEEe
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-------------------------------NCIMSL 54 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~-------------------------------~~i~~l 54 (845)
|..-++..-...++|..|++ ++.+||.|-.|..|++|.+... ....++
T Consensus 369 ic~YT~~nt~~~v~ca~fSd-dssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L 447 (707)
T KOG0263|consen 369 ICMYTFHNTYQGVTCAEFSD-DSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTL 447 (707)
T ss_pred EEEEEEEEcCCcceeEeecC-CcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEe
Confidence 34456666677899999998 8889999999999999987521 123456
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce
Q psy467 55 SGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC 134 (845)
Q Consensus 55 ~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~ 134 (845)
.+|.++|..+.|+|+.++|++++.|++|++|.+.+..++..+++|..+|+++.|+|.|-|||+++.|++-++|......+
T Consensus 448 ~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~P 527 (707)
T KOG0263|consen 448 YGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKP 527 (707)
T ss_pred ecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe
Q psy467 135 IYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 135 l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~ 214 (845)
++.+.+|-+.|.|+.|+|+.+|+++|+.|.++++ ||+.+|.. +..|.
T Consensus 528 lRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRl-------------WDv~~G~~--------------------VRiF~ 574 (707)
T KOG0263|consen 528 LRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRL-------------WDVSTGNS--------------------VRIFT 574 (707)
T ss_pred hhhhcccccccceEEECCcccccccCCCCceEEE-------------EEcCCCcE--------------------EEEec
Confidence 9999999999999999999999999999999999 99999998 88888
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
||... | .+++|+|+|+ +
T Consensus 575 GH~~~-------V---------------------------~al~~Sp~Gr-----------------------------~ 591 (707)
T KOG0263|consen 575 GHKGP-------V---------------------------TALAFSPCGR-----------------------------Y 591 (707)
T ss_pred CCCCc-------e---------------------------EEEEEcCCCc-----------------------------e
Confidence 98888 7 7777777777 9
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc-------------------
Q psy467 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR------------------- 354 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk------------------- 354 (845)
|++|+.||.|.+||+.+++++..+.+|.+.|.++.||.||..||+|+.|. |++||+..-.
T Consensus 592 LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
T KOG0263|consen 592 LASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQEN 671 (707)
T ss_pred EeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccC
Confidence 99999999999999999999999999999999999999999999999999 9999986421
Q ss_pred -----eEEEecCCCCCeEEEEEc
Q psy467 355 -----QYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 355 -----~l~tl~~h~~~VtsVafS 372 (845)
++.++.....+|..+.|.
T Consensus 672 ~~~~~llgs~~tK~tpv~~l~Ft 694 (707)
T KOG0263|consen 672 NASSLLLGSFYTKNTPVVGLHFT 694 (707)
T ss_pred CCCcceeeeeeecCceEEEEEEe
Confidence 344555555677777777
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.4e-30 Score=269.51 Aligned_cols=326 Identities=20% Similarity=0.276 Sum_probs=255.8
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
.+.+|..|.+.|.+++.+| +.+++|||+.|..-.||++.++.....+.+|.+.|+++.|+.+|.+||+|..+|.|.||+
T Consensus 56 S~~tF~~H~~svFavsl~P-~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~ 134 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHP-NNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFK 134 (399)
T ss_pred ceeehhhcCCceEEEEeCC-CCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEE
Confidence 3678999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
..++.....+......+.-+.|||-+..|++|+.||.+.+|.+.++...+.+.+|+.++++-.|.|+|+.++++..||+|
T Consensus 135 ~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti 214 (399)
T KOG0296|consen 135 VSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTI 214 (399)
T ss_pred cccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceE
Confidence 99999888887667788999999999999999999999999999988889999999999999999999999999999999
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCC---CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPP---PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~---~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
++ ||..+++++.... ......+.+...+..+.. +.... ...+
T Consensus 215 ~~-------------Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~--g~~e~----~~~~---------------- 259 (399)
T KOG0296|consen 215 IV-------------WNPKTGQPLHKITQAEGLELPCISLNLAGSTLTK--GNSEG----VACG---------------- 259 (399)
T ss_pred EE-------------EecCCCceeEEecccccCcCCccccccccceeEe--ccCCc----cEEE----------------
Confidence 99 9999998754333 222333444443332221 11111 0000
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSS 323 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~ 323 (845)
.+...-.+.+..++. ...........+.++.+.|-...+. +.|+|+-||+|.|||+...++.+.+. |..
T Consensus 260 ------~~~~sgKVv~~~n~~--~~~l~~~~e~~~esve~~~~ss~lp--L~A~G~vdG~i~iyD~a~~~~R~~c~-he~ 328 (399)
T KOG0296|consen 260 ------VNNGSGKVVNCNNGT--VPELKPSQEELDESVESIPSSSKLP--LAACGSVDGTIAIYDLAASTLRHICE-HED 328 (399)
T ss_pred ------EccccceEEEecCCC--Cccccccchhhhhhhhhcccccccc--hhhcccccceEEEEecccchhheecc-CCC
Confidence 000001111111110 0000111223334444444333222 89999999999999999877665554 788
Q ss_pred CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 324 TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 324 ~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.|+.+.|-+ ..+|++++.+| |+.||..+|+++.++.+|...|.+++.+ +.+++++.
T Consensus 329 ~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~ 386 (399)
T KOG0296|consen 329 GVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTV 386 (399)
T ss_pred ceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEe
Confidence 899999999 78999999999 9999999999999999999999999999 66666654
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-30 Score=264.90 Aligned_cols=244 Identities=27% Similarity=0.446 Sum_probs=212.3
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
++.|+||+..|..++.++ +|++.++++.|+++++||+.+++..+.|.+|...|.+++|++|.+.+++|+.|.+|.+|++
T Consensus 56 ~r~~~GHsH~v~dv~~s~-dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt 134 (315)
T KOG0279|consen 56 VRRLTGHSHFVSDVVLSS-DGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNT 134 (315)
T ss_pred eeeeeccceEecceEEcc-CCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeee
Confidence 478999999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCC--CCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC
Q psy467 88 AVPTVQRTLNGH--KSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 88 ~tg~~v~~l~~h--~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D 163 (845)
.. .+..++..+ ...|.|++|+|+ ..+|++++.|++|++||+++.+....+.+|++.++.+++||||...++|+.|
T Consensus 135 ~g-~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkd 213 (315)
T KOG0279|consen 135 LG-VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKD 213 (315)
T ss_pred cc-cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCC
Confidence 85 445554433 788999999998 6799999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
|.+.+ ||++.++. +..+.+. .. |
T Consensus 214 g~~~L-------------wdL~~~k~--------------------lysl~a~-~~-------v---------------- 236 (315)
T KOG0279|consen 214 GEAML-------------WDLNEGKN--------------------LYSLEAF-DI-------V---------------- 236 (315)
T ss_pred ceEEE-------------EEccCCce--------------------eEeccCC-Ce-------E----------------
Confidence 99999 99999888 5554332 22 3
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC---
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK--- 320 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g--- 320 (845)
.+++|+|+.. .|+.+ .+..|+|||+.++.++..+..
T Consensus 237 -----------~sl~fspnry-----------------------------wL~~a-t~~sIkIwdl~~~~~v~~l~~d~~ 275 (315)
T KOG0279|consen 237 -----------NSLCFSPNRY-----------------------------WLCAA-TATSIKIWDLESKAVVEELKLDGI 275 (315)
T ss_pred -----------eeEEecCCce-----------------------------eEeec-cCCceEEEeccchhhhhhcccccc
Confidence 6677777765 55554 455699999999988776652
Q ss_pred -C-----CCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 321 -N-----SSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 321 -h-----~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
. .-...+++||+||..|++|..|+ |++|.+.
T Consensus 276 g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 276 GPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred ccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 1 22467889999999999999999 9999874
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=295.03 Aligned_cols=290 Identities=30% Similarity=0.503 Sum_probs=247.7
Q ss_pred eeee-EEeccC-CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe--eEEEecCCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 5 VEKA-EDFMAH-GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 5 lw~l-~~L~gH-~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
.|.+ +.+.+| ...|.|+.|++ +|+.+++++.++.+++|+..+.+ ..+.+.+|...|.+++|+|++.++++++.|+
T Consensus 147 ~~~~~~~~~~~~~~sv~~~~fs~-~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~ 225 (456)
T KOG0266|consen 147 VFSLEQTLAGHECPSVTCVDFSP-DGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDK 225 (456)
T ss_pred cceeeeeecccccCceEEEEEcC-CCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCc
Confidence 3444 334444 78999999999 99999999999999999997777 7778889999999999999999999999999
Q ss_pred cEEEEEC-CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 81 SIKIWNL-AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 81 tV~VWDl-~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
+|+|||+ ..+..++++.+|...|++++|+|+++.+++|+.|++|++||+++++++..+.+|...|.+++|++++++|++
T Consensus 226 tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s 305 (456)
T KOG0266|consen 226 TLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVS 305 (456)
T ss_pred eEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEE
Confidence 9999999 556899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
++.|+.|++ ||+.++... .+..+.++... . .+
T Consensus 306 ~s~d~~i~v-------------wd~~~~~~~------------------~~~~~~~~~~~----~-~~------------ 337 (456)
T KOG0266|consen 306 ASYDGTIRV-------------WDLETGSKL------------------CLKLLSGAENS----A-PV------------ 337 (456)
T ss_pred cCCCccEEE-------------EECCCCcee------------------eeecccCCCCC----C-ce------------
Confidence 999999999 999988840 02222222111 0 01
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~ 319 (845)
..+.|+|++. ++++++.|+.+++||+..+.++..+.
T Consensus 338 ---------------~~~~fsp~~~-----------------------------~ll~~~~d~~~~~w~l~~~~~~~~~~ 373 (456)
T KOG0266|consen 338 ---------------TSVQFSPNGK-----------------------------YLLSASLDRTLKLWDLRSGKSVGTYT 373 (456)
T ss_pred ---------------eEEEECCCCc-----------------------------EEEEecCCCeEEEEEccCCcceeeec
Confidence 4455555554 99999999999999999999999999
Q ss_pred CCCCC---EEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCC-CCCeEEEEEc-CCceEEEE-------EEEEee
Q psy467 320 KNSST---IRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMG-WGKVQDLAVT-GTQLWFRR-------VGTWSH 386 (845)
Q Consensus 320 gh~~~---VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h-~~~VtsVafS-dg~lLaaS-------VsiW~~ 386 (845)
+|... +.+...++.|+++++|+.|+ |++|+..++..+..+.+| ...+..++++ ...+++.+ +.+|..
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~ 453 (456)
T KOG0266|consen 374 GHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKY 453 (456)
T ss_pred ccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence 98764 44555678999999999999 999999999999999999 8899999999 66666655 777764
Q ss_pred C
Q psy467 387 Q 387 (845)
Q Consensus 387 d 387 (845)
+
T Consensus 454 ~ 454 (456)
T KOG0266|consen 454 D 454 (456)
T ss_pred C
Confidence 4
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-29 Score=271.49 Aligned_cols=339 Identities=17% Similarity=0.256 Sum_probs=257.0
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec---CCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS---GHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~---~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
.+++.|..-|.|+.|+| +|.++|+++.||+|.+||-.+++.+..+. +|.+.|.+++|+||++.+++++.|.+++||
T Consensus 184 ~s~r~HskFV~~VRysP-DG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIW 262 (603)
T KOG0318|consen 184 SSFREHSKFVNCVRYSP-DGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIW 262 (603)
T ss_pred ecccccccceeeEEECC-CCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEE
Confidence 46788999999999999 89999999999999999999999999998 899999999999999999999999999999
Q ss_pred ECCCCcEEE-------------------------------------------EEcCCCCCeEEEEEccCCCEEEEEECCC
Q psy467 86 NLAVPTVQR-------------------------------------------TLNGHKSSITSVDFHPYGDYLCSGSLDS 122 (845)
Q Consensus 86 Dl~tg~~v~-------------------------------------------~l~~h~~~V~~lafspdg~~Lasgs~DG 122 (845)
|+.+.++++ .+.+|...|+++..++++++|++|+.||
T Consensus 263 dVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG 342 (603)
T KOG0318|consen 263 DVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDG 342 (603)
T ss_pred EeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCc
Confidence 997655433 2347888999999999999999999999
Q ss_pred eEEEEECCCCceEEEE-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC---CCCCC
Q psy467 123 FIKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP---PPQYT 198 (845)
Q Consensus 123 ~I~IWDl~t~~~l~~~-~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~---~~~~i 198 (845)
.|.-||..++..-+.. +.|...|.+++-+..+ .+++++.|.++++ .++.....-... -..+.
T Consensus 343 ~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~-~~~t~g~Dd~l~~-------------~~~~~~~~t~~~~~~lg~QP 408 (603)
T KOG0318|consen 343 HINSWDSGSGTSDRLAGKGHTNQIKGMAASESG-ELFTIGWDDTLRV-------------ISLKDNGYTKSEVVKLGSQP 408 (603)
T ss_pred eEEEEecCCccccccccccccceEEEEeecCCC-cEEEEecCCeEEE-------------EecccCcccccceeecCCCc
Confidence 9999999888765444 6799999999988544 4778888999999 666443332221 13344
Q ss_pred cceeecCCCCeEEE-EecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcC-----------
Q psy467 199 SSVPFSHNTSLRKS-FTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN----------- 266 (845)
Q Consensus 199 ~svs~spdg~~l~~-~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~----------- 266 (845)
..++..+++..... ...+-.-..... .+..+.. .-...+++++|++...
T Consensus 409 ~~lav~~d~~~avv~~~~~iv~l~~~~-~~~~~~~------------------~y~~s~vAv~~~~~~vaVGG~Dgkvhv 469 (603)
T KOG0318|consen 409 KGLAVLSDGGTAVVACISDIVLLQDQT-KVSSIPI------------------GYESSAVAVSPDGSEVAVGGQDGKVHV 469 (603)
T ss_pred eeEEEcCCCCEEEEEecCcEEEEecCC-cceeecc------------------ccccceEEEcCCCCEEEEecccceEEE
Confidence 46666666532221 111100000000 0000000 0011455555554421
Q ss_pred ---------CCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe-cCCCCCEEEEEEeCCCCE
Q psy467 267 ---------RSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT-EKNSSTIRRLTFSEGGEC 336 (845)
Q Consensus 267 ---------~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl-~gh~~~VtslafSpdG~~ 336 (845)
....+..+...++++++|||+. +||+|...+.|.+||+.+.+..... .-|...|.+++|+|+..+
T Consensus 470 ysl~g~~l~ee~~~~~h~a~iT~vaySpd~~-----yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~ 544 (603)
T KOG0318|consen 470 YSLSGDELKEEAKLLEHRAAITDVAYSPDGA-----YLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKL 544 (603)
T ss_pred EEecCCcccceeeeecccCCceEEEECCCCc-----EEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceE
Confidence 2335567789999999999999 9999999999999999988763333 348999999999999999
Q ss_pred EEEEeCCC-EEEEEecCCce-EEEecCCCCCeEEEEEcCCceEEEE-----EEEEee
Q psy467 337 LLGGDTEG-LKVYGWEPARQ-YDAQPMGWGKVQDLAVTGTQLWFRR-----VGTWSH 386 (845)
Q Consensus 337 Lasgs~DG-I~IWDl~tgk~-l~tl~~h~~~VtsVafSdg~lLaaS-----VsiW~~ 386 (845)
+|+|+.|. |.||+++.... +.....|...|+.+.|-|...++.+ +.+|.+
T Consensus 545 vATGSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~wlde~tvvSsG~Da~iK~W~v 601 (603)
T KOG0318|consen 545 VATGSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWLDESTVVSSGQDANIKVWNV 601 (603)
T ss_pred EEeccccceEEEEEccChhhheEeccccccCceeEEEecCceEEeccCcceeEEecc
Confidence 99999999 99999987543 4555679989999999955555544 999975
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=285.19 Aligned_cols=342 Identities=21% Similarity=0.368 Sum_probs=288.3
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.+.+.|..+.|..|+|-.+..++||+++..+.+++|+..+..+. .+.+|+..|.++....+|.+|++|+.|.++++|.+
T Consensus 316 ~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~ 394 (775)
T KOG0319|consen 316 VKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRL 394 (775)
T ss_pred ehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEEEe
Confidence 45678999999999996657899999999999999999887766 78999999999996667889999999999999988
Q ss_pred CCC----cEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCc-----eE----EEEcCCCCCeEEEEEecC
Q psy467 88 AVP----TVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKG-----CI----YTYRGHSKSINSIRFSPD 153 (845)
Q Consensus 88 ~tg----~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~-----~l----~~~~~h~~~V~sLafSPd 153 (845)
+++ .++....+|...|.+++++..+ .+|+++|.|+++++|++...+ .+ .+...|...|+|++++|+
T Consensus 395 ~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~n 474 (775)
T KOG0319|consen 395 NNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPN 474 (775)
T ss_pred cCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCC
Confidence 544 2345567899999999998765 689999999999999996521 11 123469999999999999
Q ss_pred CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccc
Q psy467 154 GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEEN 233 (845)
Q Consensus 154 g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~ 233 (845)
.+++|+|+.|.+.++ |++..... +.++.+|..+ +
T Consensus 475 dkLiAT~SqDktaKi-------------W~le~~~l--------------------~~vLsGH~RG-------v------ 508 (775)
T KOG0319|consen 475 DKLIATGSQDKTAKI-------------WDLEQLRL--------------------LGVLSGHTRG-------V------ 508 (775)
T ss_pred CceEEecccccceee-------------ecccCceE--------------------EEEeeCCccc-------e------
Confidence 999999999999999 99997666 8999999999 8
Q ss_pred ccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe
Q psy467 234 AESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS 313 (845)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~ 313 (845)
+++.|++..+ +++|+|.|++|+||.+.++.
T Consensus 509 ---------------------w~V~Fs~~dq-----------------------------~laT~SgD~TvKIW~is~fS 538 (775)
T KOG0319|consen 509 ---------------------WCVSFSKNDQ-----------------------------LLATCSGDKTVKIWSISTFS 538 (775)
T ss_pred ---------------------EEEEeccccc-----------------------------eeEeccCCceEEEEEeccce
Confidence 8889999888 99999999999999999999
Q ss_pred EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 314 LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 314 ~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
|+.++.||...|..+.|-.+|+.|++++.|| |+||++.++.|+.++..|.+.|++++.+ .+..++++ +..|.
T Consensus 539 ClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk- 617 (775)
T KOG0319|consen 539 CLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWK- 617 (775)
T ss_pred eeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEee-
Confidence 9999999999999999999999999999999 9999999999999999999999999999 66655544 56664
Q ss_pred CCCCCccccCCCCCCCCCCCCCCccccccCCCCCCccCCccccCCCcccccCCCCcCChhHHHHHHhhchHHHHHHHHHh
Q psy467 387 QDSGFSTLDSYSAGSPVSTMGRERDQIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNR 466 (845)
Q Consensus 387 d~~~~~~~~~~~~~~p~~~~~~~~~~~vp~~~~~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~l~~R 466 (845)
| -++.+.=.+.-|...+++
T Consensus 618 D-------------------------------------------------------~Te~~~~ee~~K~~eaie------ 636 (775)
T KOG0319|consen 618 D-------------------------------------------------------VTEEEQNEEQEKREEAIE------ 636 (775)
T ss_pred c-------------------------------------------------------CcHHHHHHHHHHHHHHHH------
Confidence 1 122232222333333333
Q ss_pred hhhHHHHHHHHhcCChhHHHHHHHhcCCceeeeehhhhhccchh
Q psy467 467 QRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDLFKSMLGQGY 510 (845)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (845)
.=|.+.+...++++.+|+-.|++...|--+.+++|-+..||.
T Consensus 637 --q~QeL~n~l~~~~~~~A~~LA~tLd~P~~~f~vi~~~~r~r~ 678 (775)
T KOG0319|consen 637 --QEQELENLLSQKRYTKAFVLALTLDKPHLVFTVINALYRERD 678 (775)
T ss_pred --HHHHHHHHHhhhhhHHHHHhHhhccCchhHHHHHHHHHhcCC
Confidence 335667777899999999999999999999999997666665
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=259.20 Aligned_cols=246 Identities=25% Similarity=0.438 Sum_probs=220.4
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC------eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCc
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS------NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGS 81 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~------~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGt 81 (845)
.+.+.--...|..++|+| +|+++|.|+-|+...||++.+. ...+.+.+|++.+.|+.|-+ ...|++++.|.+
T Consensus 90 ~haipl~s~WVMtCA~sP-Sg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~T 167 (343)
T KOG0286|consen 90 VHAIPLPSSWVMTCAYSP-SGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMT 167 (343)
T ss_pred eeEEecCceeEEEEEECC-CCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCce
Confidence 345666678999999999 9999999999999999999754 34567899999999999987 467899999999
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
..+||+++++.+..|.+|.+.|.+++++| +++.|++|+.|+..++||++.+.++++|.+|...|++++|.|+|.-|++|
T Consensus 168 CalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatG 247 (343)
T KOG0286|consen 168 CALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATG 247 (343)
T ss_pred EEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeec
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
+.|++.++ ||++..+. ++.+...
T Consensus 248 SDD~tcRl-------------yDlRaD~~--------------------~a~ys~~------------------------ 270 (343)
T KOG0286|consen 248 SDDATCRL-------------YDLRADQE--------------------LAVYSHD------------------------ 270 (343)
T ss_pred CCCceeEE-------------EeecCCcE--------------------EeeeccC------------------------
Confidence 99999999 99998877 4443311
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
.. ..+|++++||-.|+ +|++|..|..+.+||.-.++.+..+.+
T Consensus 271 ----------------------~~----------~~gitSv~FS~SGR-----lLfagy~d~~c~vWDtlk~e~vg~L~G 313 (343)
T KOG0286|consen 271 ----------------------SI----------ICGITSVAFSKSGR-----LLFAGYDDFTCNVWDTLKGERVGVLAG 313 (343)
T ss_pred ----------------------cc----------cCCceeEEEccccc-----EEEeeecCCceeEeeccccceEEEeec
Confidence 11 23455666666666 999999999999999999999999999
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
|...|+|+..+|||..|++|+.|. ++||.
T Consensus 314 HeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 314 HENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred cCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 999999999999999999999999 99994
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=276.12 Aligned_cols=274 Identities=21% Similarity=0.350 Sum_probs=244.5
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~ 94 (845)
...|..+.|.| +|+.|++|+..|...+|+..+......++.|..+|.++.|++++.++++|+.+|.|++|+..-. .++
T Consensus 96 kc~V~~v~WtP-eGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-nVk 173 (464)
T KOG0284|consen 96 KCPVNVVRWTP-EGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-NVK 173 (464)
T ss_pred ccceeeEEEcC-CCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh-hhH
Confidence 45899999999 9999999999999999998666656667899999999999999999999999999999998744 455
Q ss_pred EEcCC-CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 95 TLNGH-KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 95 ~l~~h-~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
.+..| ...|++++|+|+...|++++.||+|+|||....+....+.+|.-.|.+++|+|...++++++.|..|++
T Consensus 174 ~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKl----- 248 (464)
T KOG0284|consen 174 IIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKL----- 248 (464)
T ss_pred HhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEe-----
Confidence 55554 489999999999999999999999999999988888889999999999999999999999999999999
Q ss_pred cCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~ 253 (845)
||.+++.+ +.++.+|... |
T Consensus 249 --------WDprSg~c--------------------l~tlh~HKnt-------V-------------------------- 267 (464)
T KOG0284|consen 249 --------WDPRSGSC--------------------LATLHGHKNT-------V-------------------------- 267 (464)
T ss_pred --------ecCCCcch--------------------hhhhhhccce-------E--------------------------
Confidence 99999999 7777777776 6
Q ss_pred ceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeC-
Q psy467 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE- 332 (845)
Q Consensus 254 ~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp- 332 (845)
..+.|++++. +|+++|.|..+++||+++.+.+.++++|...|+++.|+|
T Consensus 268 -l~~~f~~n~N-----------------------------~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~ 317 (464)
T KOG0284|consen 268 -LAVKFNPNGN-----------------------------WLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPL 317 (464)
T ss_pred -EEEEEcCCCC-----------------------------eeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccc
Confidence 6777777777 999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCC-EEEEEecCCceEEEe-cCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 333 GGECLLGGDTEG-LKVYGWEPARQYDAQ-PMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 333 dG~~Lasgs~DG-I~IWDl~tgk~l~tl-~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
...++.+|+.|| |..|.+...+.+..+ .+|...|++++|+ =|.+|+++ +..|..
T Consensus 318 ~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 318 NESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred cccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 566888999999 999999866666555 4699999999999 78888877 899975
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-30 Score=291.94 Aligned_cols=241 Identities=24% Similarity=0.465 Sum_probs=218.6
Q ss_pred EEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-------------------------------cEEEEEcCC
Q psy467 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-------------------------------TVQRTLNGH 99 (845)
Q Consensus 51 i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg-------------------------------~~v~~l~~h 99 (845)
..++......++|..|++|+..||.|..|..|++|.+... ....++-+|
T Consensus 371 ~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH 450 (707)
T KOG0263|consen 371 MYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGH 450 (707)
T ss_pred EEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecC
Confidence 3444445668999999999999999999999999988621 123346689
Q ss_pred CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCcee
Q psy467 100 KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSI 179 (845)
Q Consensus 100 ~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I 179 (845)
.++|....|+|+.++|++++.|+++++|.+.+..++..+++|..+|+++.|+|.|-+||+++.|++.++
T Consensus 451 ~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArL----------- 519 (707)
T KOG0263|consen 451 SGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARL----------- 519 (707)
T ss_pred CCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeee-----------
Confidence 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEE
Q psy467 180 HVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIF 259 (845)
Q Consensus 180 ~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~f 259 (845)
|......+ +..+.+|... | .|+.|
T Consensus 520 --Ws~d~~~P--------------------lRifaghlsD-------V---------------------------~cv~F 543 (707)
T KOG0263|consen 520 --WSTDHNKP--------------------LRIFAGHLSD-------V---------------------------DCVSF 543 (707)
T ss_pred --eecccCCc--------------------hhhhcccccc-------c---------------------------ceEEE
Confidence 99888777 6667777766 5 67777
Q ss_pred cCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEE
Q psy467 260 QPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG 339 (845)
Q Consensus 260 spdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Las 339 (845)
+|+.. ++++||.|.+|++||+.+|..++.|.||.++|++++|||+|++|++
T Consensus 544 HPNs~-----------------------------Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaS 594 (707)
T KOG0263|consen 544 HPNSN-----------------------------YVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLAS 594 (707)
T ss_pred CCccc-----------------------------ccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEee
Confidence 77777 9999999999999999999999999999999999999999999999
Q ss_pred EeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 340 GDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 340 gs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
|+.|+ |.+||+.+++.+..+.+|.+.|.++.|| +|..|+++ |.+|.+.
T Consensus 595 g~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~ 649 (707)
T KOG0263|consen 595 GDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLT 649 (707)
T ss_pred cccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEch
Confidence 99999 9999999999999999999999999999 99999988 9999654
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=282.64 Aligned_cols=286 Identities=22% Similarity=0.375 Sum_probs=240.5
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
++++.||...|+++.|.|..+.+|++++.|+.|+||++-+ +++++++.+|..+|..++|+.+|..+++++.|+.|++||
T Consensus 207 ~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwD 286 (503)
T KOG0282|consen 207 SHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWD 286 (503)
T ss_pred eeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeec
Confidence 5789999999999999998999999999999999999855 899999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
+++|+++..+. ....++|+.|+|++ +.|++|+.|+.|+.||+++++.++.+..|-+.|..+.|-++|+.+++.+.|+.
T Consensus 287 tETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks 365 (503)
T KOG0282|consen 287 TETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKS 365 (503)
T ss_pred cccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCcc
Confidence 99999999997 45678999999998 88999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCC---CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPP---PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~---~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
+++ |+.+....+.... .....++..+|++..++.-... .
T Consensus 366 ~ri-------------We~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~d-N------------------------ 407 (503)
T KOG0282|consen 366 VRI-------------WENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMD-N------------------------ 407 (503)
T ss_pred EEE-------------EEcCCCccchhhcchhhccCcceecCCCCCeehhhccC-c------------------------
Confidence 999 9988776654432 3445678888888766542111 1
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCC--ccc--ccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSG--TCV--PVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT 318 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~--~~~--~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl 318 (845)
....|+.......+. ... .+.+--..+.|||||. +|++|+.||.+.+||.++.+++..+
T Consensus 408 ------------~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~-----~l~SGdsdG~v~~wdwkt~kl~~~l 470 (503)
T KOG0282|consen 408 ------------YIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGR-----TLCSGDSDGKVNFWDWKTTKLVSKL 470 (503)
T ss_pred ------------eEEEEecccccccCHhhhhcceeccCceeeEEEcCCCC-----eEEeecCCccEEEeechhhhhhhcc
Confidence 222333222211111 011 1122335678899988 9999999999999999999999999
Q ss_pred cCCCCCEEEEEEeCC-CCEEEEEeCCC-EEEEE
Q psy467 319 EKNSSTIRRLTFSEG-GECLLGGDTEG-LKVYG 349 (845)
Q Consensus 319 ~gh~~~VtslafSpd-G~~Lasgs~DG-I~IWD 349 (845)
++|.+++..+.|+|. -..+|+++.|| |++|+
T Consensus 471 kah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 471 KAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred ccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 999999999999995 56899999999 99996
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-29 Score=257.46 Aligned_cols=274 Identities=22% Similarity=0.376 Sum_probs=243.2
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEEC-CCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl-~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
..+.+|.+.|.++.|+| +|.+||+|+.|..|.+|++ ...+....+++|.++|..+.|.+|++.|++++.|.+|+.||+
T Consensus 41 m~l~gh~geI~~~~F~P-~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~ 119 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHP-DGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDA 119 (338)
T ss_pred hhcCCCcceEEEEEECC-CCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEec
Confidence 45789999999999999 9999999999999999995 556778889999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
++|+.++.+++|..-|+.+.-+.-|. ++.+++.||++++||+++..+++++. ...+++++.|..++..+++|+-|+.|
T Consensus 120 ~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~i 198 (338)
T KOG0265|consen 120 ETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDI 198 (338)
T ss_pred ccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceeeccccCce
Confidence 99999999999999999988554453 56788999999999999998888886 45679999999999999999999999
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
++ ||++.... +..+.+|.+. |
T Consensus 199 kv-------------Wd~r~~d~--------------------~~~lsGh~Dt-------I------------------- 219 (338)
T KOG0265|consen 199 KV-------------WDLRKNDG--------------------LYTLSGHADT-------I------------------- 219 (338)
T ss_pred ee-------------eccccCcc--------------------eEEeecccCc-------e-------------------
Confidence 99 99998888 8889999888 7
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC----eEEEEecCCC
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF----SLVSTTEKNS 322 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~----~~l~tl~gh~ 322 (845)
+.+..+++|. ++.+-+.|.++++||++-. .++..+.+|.
T Consensus 220 --------t~lsls~~gs-----------------------------~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~ 262 (338)
T KOG0265|consen 220 --------TGLSLSRYGS-----------------------------FLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHI 262 (338)
T ss_pred --------eeEEeccCCC-----------------------------ccccccccceEEEEEecccCCCCceEEEeecch
Confidence 7777777777 8999999999999999754 4578888763
Q ss_pred ----CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEcCCceEEEE
Q psy467 323 ----STIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVTGTQLWFRR 380 (845)
Q Consensus 323 ----~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafSdg~lLaaS 380 (845)
.....++|||+++.+.+|+.|. +++||....+++..+.+|.+.|.+++|++.+-|..+
T Consensus 263 hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils 325 (338)
T KOG0265|consen 263 HNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILS 325 (338)
T ss_pred hhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEE
Confidence 3456789999999999999999 999999998999999999999999999954444444
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-29 Score=267.27 Aligned_cols=280 Identities=23% Similarity=0.358 Sum_probs=247.5
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC--Ce--eEEEec----------CCCCCeEEEEEcCCCCEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK--SN--CIMSLS----------GHSTPVESVQFGNGEETLS 74 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t--~~--~i~~l~----------~h~~~V~sLafSpdg~~La 74 (845)
+-+. |...|.+.+|+|-...++++|+.|-..++|++.. .. ....++ ..+..|++++|+.+|+.||
T Consensus 173 kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~La 251 (524)
T KOG0273|consen 173 KVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLA 251 (524)
T ss_pred eecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEE
Confidence 4445 9999999999995445999999999999999864 11 111111 1346899999999999999
Q ss_pred EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC
Q psy467 75 AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 75 Sgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg 154 (845)
+|+.||.+++|+.. |.++.++..|+++|.++.|+..|+||++++.|+++.+||..++...+.+.-|..+-..+.|-.+
T Consensus 252 tG~~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~- 329 (524)
T KOG0273|consen 252 TGSEDGEARIWNKD-GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSN- 329 (524)
T ss_pred EeecCcEEEEEecC-chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecC-
Confidence 99999999999986 7788899999999999999999999999999999999999999999999988888788999854
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
.-+++++.|+.|++ +.+....+ +.++.+|.+. |
T Consensus 330 ~~F~ts~td~~i~V-------------~kv~~~~P--------------------~~t~~GH~g~-------V------- 362 (524)
T KOG0273|consen 330 DEFATSSTDGCIHV-------------CKVGEDRP--------------------VKTFIGHHGE-------V------- 362 (524)
T ss_pred ceEeecCCCceEEE-------------EEecCCCc--------------------ceeeecccCc-------e-------
Confidence 56899999999999 88887777 7888888888 7
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
..+.|+|.+. +|++++.|++++||+.....+
T Consensus 363 --------------------~alk~n~tg~-----------------------------LLaS~SdD~TlkiWs~~~~~~ 393 (524)
T KOG0273|consen 363 --------------------NALKWNPTGS-----------------------------LLASCSDDGTLKIWSMGQSNS 393 (524)
T ss_pred --------------------EEEEECCCCc-----------------------------eEEEecCCCeeEeeecCCCcc
Confidence 7888888888 999999999999999999999
Q ss_pred EEEecCCCCCEEEEEEeCCC---------CEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE---
Q psy467 315 VSTTEKNSSTIRRLTFSEGG---------ECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR--- 380 (845)
Q Consensus 315 l~tl~gh~~~VtslafSpdG---------~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS--- 380 (845)
.+.+.+|...|..+.|+|+| ..|++++.|+ |++||+..+.++.+|..|..+|.+++|+ +|+++|.+
T Consensus 394 ~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~d 473 (524)
T KOG0273|consen 394 VHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLD 473 (524)
T ss_pred hhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCC
Confidence 99999999999999999964 4789999999 9999999999999999999999999999 99999998
Q ss_pred --EEEEeeC
Q psy467 381 --VGTWSHQ 387 (845)
Q Consensus 381 --VsiW~~d 387 (845)
|.+|...
T Consensus 474 g~V~iws~~ 482 (524)
T KOG0273|consen 474 GCVHIWSTK 482 (524)
T ss_pred CeeEecccc
Confidence 8999754
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-29 Score=279.73 Aligned_cols=349 Identities=22% Similarity=0.320 Sum_probs=254.8
Q ss_pred ceeeee------EEecc-CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCC--EE
Q psy467 3 AKVEKA------EDFMA-HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE--TL 73 (845)
Q Consensus 3 irlw~l------~~L~g-H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~--~L 73 (845)
+++|.+ +.+++ |+++|.-++|+| .+.+||+|+.||.++|||+..+.+.+.+.+|.+.|.++.|+|+-+ .|
T Consensus 86 lrv~~L~tgk~irswKa~He~Pvi~ma~~~-~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL 164 (775)
T KOG0319|consen 86 LRVWSLPTGKLIRSWKAIHEAPVITMAFDP-TGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLL 164 (775)
T ss_pred EEEEEcccchHhHhHhhccCCCeEEEEEcC-CCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhhe
Confidence 456664 34566 999999999999 889999999999999999999999999999999999999999765 48
Q ss_pred EEEECCCcEEEEECCCCcE-EEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE--------------
Q psy467 74 SAGCQSGSIKIWNLAVPTV-QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-------------- 138 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~~-v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-------------- 138 (845)
++|..|++|++||+.+... +..+..|.+.|++++|++|+..+++++.|..+.+||+.+.+....+
T Consensus 165 ~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~ 244 (775)
T KOG0319|consen 165 ASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLRE 244 (775)
T ss_pred eecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEech
Confidence 9999999999999996554 7777889999999999999999999999999999998421110000
Q ss_pred --------------------------------------------------------------------------------
Q psy467 139 -------------------------------------------------------------------------------- 138 (845)
Q Consensus 139 -------------------------------------------------------------------------------- 138 (845)
T Consensus 245 ~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~nd 324 (775)
T KOG0319|consen 245 ELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYND 324 (775)
T ss_pred hcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCch
Confidence
Q ss_pred -------------------------------------cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEE
Q psy467 139 -------------------------------------RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHV 181 (845)
Q Consensus 139 -------------------------------------~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~v 181 (845)
.+|...|.+++...+|-+|++|+.|.++++
T Consensus 325 EI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svil------------- 391 (775)
T KOG0319|consen 325 EILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVIL------------- 391 (775)
T ss_pred hheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEE-------------
Confidence 033444444443233445555555555555
Q ss_pred EECCCCccCC------CCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCce
Q psy467 182 VDLSLVHPLG------TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDY 255 (845)
Q Consensus 182 WDl~tg~~l~------~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 255 (845)
|.+.++.... .-+...+..++++..+....... +.+..+.+|.+....+.. .
T Consensus 392 Wr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsv-----S~D~tlK~W~l~~s~~~~-----------------~ 449 (775)
T KOG0319|consen 392 WRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSV-----SQDCTLKLWDLPKSKETA-----------------F 449 (775)
T ss_pred EEecCCcchhhhhhhhcccccccceeeecccCccEEEEe-----cCCceEEEecCCCccccc-----------------c
Confidence 7663322211 11234444555543332222211 223334444443211000 0
Q ss_pred eEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCC
Q psy467 256 SAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE 335 (845)
Q Consensus 256 ~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~ 335 (845)
.+.+ ........|...|++++++|+.+ ++||||.|.+.+||+++....+.++.||...|.|+.|++..+
T Consensus 450 ~~~~------~~~~t~~aHdKdIN~Vaia~ndk-----LiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq 518 (775)
T KOG0319|consen 450 PIVL------TCRYTERAHDKDINCVAIAPNDK-----LIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQ 518 (775)
T ss_pred ccee------hhhHHHHhhcccccceEecCCCc-----eEEecccccceeeecccCceEEEEeeCCccceEEEEeccccc
Confidence 0000 01112335677899999999998 999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC-CCCCccccCCC
Q psy467 336 CLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ-DSGFSTLDSYS 398 (845)
Q Consensus 336 ~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d-~~~~~~~~~~~ 398 (845)
.|++++.|+ |+||.+.+..|++++.||...|..+.|- +|..|..+ +.+|.+. .....+++...
T Consensus 519 ~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~ 589 (775)
T KOG0319|consen 519 LLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHN 589 (775)
T ss_pred eeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhcc
Confidence 999999999 9999999999999999999999999999 55555444 9999764 44555555443
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=269.13 Aligned_cols=268 Identities=21% Similarity=0.422 Sum_probs=237.1
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
....|.|+.+ +...+++|..|++|+|||..+..+...+.||++.|.|+.|. .+.|++|+.|.+|+|||+++++++
T Consensus 196 ~skgVYClQY---DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l 270 (499)
T KOG0281|consen 196 NSKGVYCLQY---DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPL 270 (499)
T ss_pred cCCceEEEEe---cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchh
Confidence 4578999999 55789999999999999999999999999999999999986 469999999999999999999999
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc---eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEee
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG---CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~---~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~ 170 (845)
.++-+|...|..+.|+ +.++++++.|.+|.+||+.... +.+.+.+|...|+.+.|+ .+++++++.|.+|++
T Consensus 271 ~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikv-- 344 (499)
T KOG0281|consen 271 NTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKV-- 344 (499)
T ss_pred hHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEE--
Confidence 9999999999999998 5699999999999999997654 334567899999999998 679999999999999
Q ss_pred eeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhcc
Q psy467 171 SFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250 (845)
Q Consensus 171 ~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~ 250 (845)
|++.+++. +.++.+|..+ |
T Consensus 345 -----------W~~st~ef--------------------vRtl~gHkRG-------I----------------------- 363 (499)
T KOG0281|consen 345 -----------WSTSTCEF--------------------VRTLNGHKRG-------I----------------------- 363 (499)
T ss_pred -----------Eeccceee--------------------ehhhhccccc-------c-----------------------
Confidence 99999998 7788888877 5
Q ss_pred CCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEE
Q psy467 251 NPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTF 330 (845)
Q Consensus 251 ~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtslaf 330 (845)
.++.+ .++ ++++|++|.+|++||+..|.++..++||..-|.|+.|
T Consensus 364 ----AClQY--r~r-----------------------------lvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF 408 (499)
T KOG0281|consen 364 ----ACLQY--RDR-----------------------------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 408 (499)
T ss_pred ----eehhc--cCe-----------------------------EEEecCCCceEEEEeccccHHHHHHhchHHhhhheee
Confidence 34333 344 9999999999999999999999999999999999999
Q ss_pred eCCCCEEEEEeCCC-EEEEEecCCc---------eEEEecCCCCCeEEEEEcCCceEEEE----EEEEeeCCCC
Q psy467 331 SEGGECLLGGDTEG-LKVYGWEPAR---------QYDAQPMGWGKVQDLAVTGTQLWFRR----VGTWSHQDSG 390 (845)
Q Consensus 331 SpdG~~Lasgs~DG-I~IWDl~tgk---------~l~tl~~h~~~VtsVafSdg~lLaaS----VsiW~~d~~~ 390 (845)
. .+.|++|+.|| |+|||+.++. |+.++..|.+.|..+.|.+-+.++.+ +-+|...+.+
T Consensus 409 d--~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl~~~ 480 (499)
T KOG0281|consen 409 D--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNGP 480 (499)
T ss_pred c--CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecceEEEeccCCCeEEEEEcCCCC
Confidence 4 67999999999 9999998763 55667789999999999988888888 9999765443
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-27 Score=292.87 Aligned_cols=278 Identities=18% Similarity=0.257 Sum_probs=229.2
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----e----eEEEecCCCCCeEEEEEcC-CCCEEEEEECCC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----N----CIMSLSGHSTPVESVQFGN-GEETLSAGCQSG 80 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~----~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DG 80 (845)
.+.+|.+.|.+++|+| +|++||+|+.|+.|+||+.... . ....+. +...|.+++|++ ++.+|++++.||
T Consensus 478 ~~~~~~~~V~~i~fs~-dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg 555 (793)
T PLN00181 478 DLLNSSNLVCAIGFDR-DGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEG 555 (793)
T ss_pred cccCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCC
Confidence 3556999999999999 9999999999999999997531 1 223333 356899999987 478999999999
Q ss_pred cEEEEECCCCcEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEe-cCCCEEE
Q psy467 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS-PDGQWIA 158 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafS-Pdg~~La 158 (845)
+|++||+.+++.+..+.+|...|++++|+| ++.+|++|+.||.|++||++++..+..+..+ ..+.++.|+ ++|.+|+
T Consensus 556 ~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~la 634 (793)
T PLN00181 556 VVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLA 634 (793)
T ss_pred eEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEE
Confidence 999999999999999999999999999997 7889999999999999999999988888754 679999995 4799999
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+|+.||.|++ ||+++... .+..+.+|... |
T Consensus 635 tgs~dg~I~i-------------wD~~~~~~-------------------~~~~~~~h~~~-------V----------- 664 (793)
T PLN00181 635 FGSADHKVYY-------------YDLRNPKL-------------------PLCTMIGHSKT-------V----------- 664 (793)
T ss_pred EEeCCCeEEE-------------EECCCCCc-------------------cceEecCCCCC-------E-----------
Confidence 9999999999 99986542 03344555555 5
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC------C
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK------F 312 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s------~ 312 (845)
..+.|. ++. ++++++.|+.|++||+.. +
T Consensus 665 ----------------~~v~f~-~~~-----------------------------~lvs~s~D~~ikiWd~~~~~~~~~~ 698 (793)
T PLN00181 665 ----------------SYVRFV-DSS-----------------------------TLVSSSTDNTLKLWDLSMSISGINE 698 (793)
T ss_pred ----------------EEEEEe-CCC-----------------------------EEEEEECCCEEEEEeCCCCccccCC
Confidence 555554 344 899999999999999974 3
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe-------------cCCCCCeEEEEEc-CCceE
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ-------------PMGWGKVQDLAVT-GTQLW 377 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl-------------~~h~~~VtsVafS-dg~lL 377 (845)
.++.++.+|...+++++|++++.+|++|+.|+ |++|+......+..+ ..|...|.+++|+ ++..+
T Consensus 699 ~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~l 778 (793)
T PLN00181 699 TPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTL 778 (793)
T ss_pred cceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeE
Confidence 67889999999999999999999999999999 999998765433221 2344569999999 88888
Q ss_pred EEE-----EEEEee
Q psy467 378 FRR-----VGTWSH 386 (845)
Q Consensus 378 aaS-----VsiW~~ 386 (845)
+++ |.+|.+
T Consensus 779 va~~~dG~I~i~~~ 792 (793)
T PLN00181 779 VAANSTGNIKILEM 792 (793)
T ss_pred EEecCCCcEEEEec
Confidence 777 888853
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=245.64 Aligned_cols=279 Identities=20% Similarity=0.308 Sum_probs=243.8
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
.+++.+.+|.++|.++.|+- +|+|.++++.|.+|++|+...+.+++++.+|...|..++.+.|+..+++|+.|..|.+|
T Consensus 8 kr~~~l~~~qgaV~avryN~-dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vw 86 (307)
T KOG0316|consen 8 KRLSILDCAQGAVRAVRYNV-DGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVW 86 (307)
T ss_pred hhceeecccccceEEEEEcc-CCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEE
Confidence 45788999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC--ceEEEEcCCCCCeEEEEEecCCCEEEEEeCC
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK--GCIYTYRGHSKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~--~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D 163 (845)
|+.+|+.++.+.+|.+.|+.++|+.+...+++|+.|.++++||.++. ++++.+......|.++... +..+++|+.|
T Consensus 87 DV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~D 164 (307)
T KOG0316|consen 87 DVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVD 164 (307)
T ss_pred EcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccC
Confidence 99999999999999999999999999999999999999999999754 6788888788889999887 6789999999
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
|+++. ||++.|.. ....-
T Consensus 165 GtvRt-------------ydiR~G~l--------------------~sDy~----------------------------- 182 (307)
T KOG0316|consen 165 GTVRT-------------YDIRKGTL--------------------SSDYF----------------------------- 182 (307)
T ss_pred CcEEE-------------EEeeccee--------------------ehhhc-----------------------------
Confidence 99999 99998876 11111
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSS 323 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~ 323 (845)
..+|+++.|++|++ ...+++.|+++++.|-.+|+++..+.+|..
T Consensus 183 -------------------------------g~pit~vs~s~d~n-----c~La~~l~stlrLlDk~tGklL~sYkGhkn 226 (307)
T KOG0316|consen 183 -------------------------------GHPITSVSFSKDGN-----CSLASSLDSTLRLLDKETGKLLKSYKGHKN 226 (307)
T ss_pred -------------------------------CCcceeEEecCCCC-----EEEEeeccceeeecccchhHHHHHhccccc
Confidence 12445555555555 888999999999999999999999999976
Q ss_pred CE--EEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCC-eEEEEEc--CCceEEEE---EEEEe
Q psy467 324 TI--RRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGK-VQDLAVT--GTQLWFRR---VGTWS 385 (845)
Q Consensus 324 ~V--tslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~-VtsVafS--dg~lLaaS---VsiW~ 385 (845)
.- ..++++.....+++|++|| |.+||+..++.+..+..+... |.+++++ -.+++.++ +..|.
T Consensus 227 ~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~ 297 (307)
T KOG0316|consen 227 MEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATGHGDLFWY 297 (307)
T ss_pred ceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecCCceecee
Confidence 43 4566777888999999999 999999999999999888877 8999999 44555555 55553
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-29 Score=273.38 Aligned_cols=277 Identities=21% Similarity=0.350 Sum_probs=255.6
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
+.|..|+..|.|+.|+| ...+++++-.+|.|.|||.++...++.+.-..-+|++..|-+-.+++++|++|..|+||+..
T Consensus 7 rk~~~rSdRVKsVd~HP-tePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnyn 85 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHP-TEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYN 85 (794)
T ss_pred hHhhccCCceeeeecCC-CCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecc
Confidence 45667999999999999 89999999999999999999999999999899999999999999999999999999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-CceEEEEcCCCCCeEEEEEec-CCCEEEEEeCCCcE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KGCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVV 166 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~~l~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I 166 (845)
+++.++.|..|...|.|++.||...++++++.|-.|++||.+. ..+.+++.+|..-|.+++|.| |.+.+|+++-|++|
T Consensus 86 t~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTV 165 (794)
T KOG0276|consen 86 TGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTV 165 (794)
T ss_pred cceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccE
Confidence 9999999999999999999999999999999999999999975 467899999999999999999 67899999999999
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
++ |.+.+..+ ..++.+|..+ |
T Consensus 166 KV-------------Wslgs~~~--------------------nfTl~gHekG-------V------------------- 186 (794)
T KOG0276|consen 166 KV-------------WSLGSPHP--------------------NFTLEGHEKG-------V------------------- 186 (794)
T ss_pred EE-------------EEcCCCCC--------------------ceeeeccccC-------c-------------------
Confidence 99 99998887 7788899888 7
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEE
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vt 326 (845)
.++.+-+.+. .. +|++|+.|..|+|||..+..|++++.||...|+
T Consensus 187 --------N~Vdyy~~gd----------------------kp-----ylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs 231 (794)
T KOG0276|consen 187 --------NCVDYYTGGD----------------------KP-----YLISGADDLTIKVWDYQTKSCVQTLEGHTNNVS 231 (794)
T ss_pred --------ceEEeccCCC----------------------cc-----eEEecCCCceEEEeecchHHHHHHhhcccccce
Confidence 7777766553 11 899999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 327 RLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 327 slafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.++|+|.-.++++|++|| ++||+-.|-++..++.-.-+.|++++-. ++..++++
T Consensus 232 ~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG 287 (794)
T KOG0276|consen 232 FVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVG 287 (794)
T ss_pred EEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEe
Confidence 999999999999999999 9999999988888888888999999988 66667766
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-27 Score=267.27 Aligned_cols=319 Identities=22% Similarity=0.328 Sum_probs=260.7
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC-CcEEEEECCC
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS-GSIKIWNLAV 89 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D-GtV~VWDl~t 89 (845)
|......|+|.+|++ .-++||+|-..|...+|.+.+..+++.+.-...+|..++|+..|++||.|+.. |++-||++.+
T Consensus 261 ln~~~~kvtaa~fH~-~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs 339 (893)
T KOG0291|consen 261 LNQNSSKVTAAAFHK-GTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS 339 (893)
T ss_pred ecccccceeeeeccC-CceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeec
Confidence 344458899999999 88999999999999999999999999998888899999999999999998764 8999999999
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~ 169 (845)
...+...++|...+++++++|||+++++|+.||.|+|||..++-|+.+|..|+..|+.+.|+..|+.+++.+-||+|+.
T Consensus 340 EsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRA- 418 (893)
T KOG0291|consen 340 ESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRA- 418 (893)
T ss_pred cceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEe-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCceeEEEECCCCccCCCCC---CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPP---PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~---~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
||+.......++. +.+..+++..|.|.++.. +.... ..+.||++.+
T Consensus 419 ------------wDlkRYrNfRTft~P~p~QfscvavD~sGelV~A--G~~d~---F~IfvWS~qT-------------- 467 (893)
T KOG0291|consen 419 ------------WDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCA--GAQDS---FEIFVWSVQT-------------- 467 (893)
T ss_pred ------------eeecccceeeeecCCCceeeeEEEEcCCCCEEEe--eccce---EEEEEEEeec--------------
Confidence 9998877655543 556668888888886654 22211 1122222211
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCCE
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSSTI 325 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~V 325 (845)
|++ ......|.++|.+++|+|++. .|++|+.|.+|++||+-.. ..+.++. +...+
T Consensus 468 ----------------Gql--lDiLsGHEgPVs~l~f~~~~~-----~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdv 523 (893)
T KOG0291|consen 468 ----------------GQL--LDILSGHEGPVSGLSFSPDGS-----LLASGSWDKTVRIWDIFSSSGTVETLE-IRSDV 523 (893)
T ss_pred ----------------Cee--eehhcCCCCcceeeEEccccC-----eEEeccccceEEEEEeeccCceeeeEe-eccce
Confidence 110 001124578899999999998 9999999999999998554 3444444 56789
Q ss_pred EEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC--------------------CCCCeEEEEEc-CCceEEEE---
Q psy467 326 RRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM--------------------GWGKVQDLAVT-GTQLWFRR--- 380 (845)
Q Consensus 326 tslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~--------------------h~~~VtsVafS-dg~lLaaS--- 380 (845)
..++|+|||+.||+++.|| |.+||.+.+..+.++.+ .....+.+++| ||..|.++
T Consensus 524 l~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~s 603 (893)
T KOG0291|consen 524 LAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGES 603 (893)
T ss_pred eEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCc
Confidence 9999999999999999999 99999886544422211 12458999999 99999888
Q ss_pred --EEEEee
Q psy467 381 --VGTWSH 386 (845)
Q Consensus 381 --VsiW~~ 386 (845)
+.++.+
T Consensus 604 n~iCiY~v 611 (893)
T KOG0291|consen 604 NSICIYDV 611 (893)
T ss_pred ccEEEEEC
Confidence 555543
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=241.32 Aligned_cols=283 Identities=19% Similarity=0.331 Sum_probs=230.0
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC---CeeEEEe-cCCCCCeEEEEEcCCCCEEEEEECC
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK---SNCIMSL-SGHSTPVESVQFGNGEETLSAGCQS 79 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t---~~~i~~l-~~h~~~V~sLafSpdg~~LaSgs~D 79 (845)
++-.++.+.+|.+.|..++|+|..|.+||+++.|+.|+||+... ..+...+ .+|+..|++++|+|.|++||+++.|
T Consensus 3 ~l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD 82 (312)
T KOG0645|consen 3 RLILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFD 82 (312)
T ss_pred cceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeecc
Confidence 45667899999999999999993388999999999999999874 3444444 4799999999999999999999999
Q ss_pred CcEEEEECCCC--cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC---ceEEEEcCCCCCeEEEEEecCC
Q psy467 80 GSIKIWNLAVP--TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK---GCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 80 GtV~VWDl~tg--~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~---~~l~~~~~h~~~V~sLafSPdg 154 (845)
.++.||.-..+ +++.++.+|+..|.|++|+++|++||+++.|++|.||.+..+ .+...+..|...|..+.|+|..
T Consensus 83 ~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~ 162 (312)
T KOG0645|consen 83 ATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTE 162 (312)
T ss_pred ceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCc
Confidence 99999987654 788999999999999999999999999999999999999643 5778889999999999999999
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
.+|++++.|.+|++ |+-..+.. =...+++.+|... |
T Consensus 163 dlL~S~SYDnTIk~-------------~~~~~ddd-----------------W~c~~tl~g~~~T-------V------- 198 (312)
T KOG0645|consen 163 DLLFSCSYDNTIKV-------------YRDEDDDD-----------------WECVQTLDGHENT-------V------- 198 (312)
T ss_pred ceeEEeccCCeEEE-------------EeecCCCC-----------------eeEEEEecCccce-------E-------
Confidence 99999999999999 76542211 0116667777665 6
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
.+++|++.|. .|++++.|++|+||-..+.
T Consensus 199 --------------------W~~~F~~~G~-----------------------------rl~s~sdD~tv~Iw~~~~~-- 227 (312)
T KOG0645|consen 199 --------------------WSLAFDNIGS-----------------------------RLVSCSDDGTVSIWRLYTD-- 227 (312)
T ss_pred --------------------EEEEecCCCc-----------------------------eEEEecCCcceEeeeeccC--
Confidence 7777777776 8999999999999986522
Q ss_pred EEEec-CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC------ceE-EEecCCCCCeEEEEEcC---CceEEEE--
Q psy467 315 VSTTE-KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA------RQY-DAQPMGWGKVQDLAVTG---TQLWFRR-- 380 (845)
Q Consensus 315 l~tl~-gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg------k~l-~tl~~h~~~VtsVafSd---g~lLaaS-- 380 (845)
+. .|...+..+.|. ...|++++.|+ |+||.-... +.+ ..-..|...|++++|.+ ++++..+
T Consensus 228 ---~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DD 302 (312)
T KOG0645|consen 228 ---LSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDD 302 (312)
T ss_pred ---cchhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCC
Confidence 22 367889999998 45899999999 999976642 112 22346888999999993 3344333
Q ss_pred --EEEEee
Q psy467 381 --VGTWSH 386 (845)
Q Consensus 381 --VsiW~~ 386 (845)
+.+|.+
T Consensus 303 G~v~~W~l 310 (312)
T KOG0645|consen 303 GIVNFWEL 310 (312)
T ss_pred ceEEEEEe
Confidence 889965
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-27 Score=246.67 Aligned_cols=250 Identities=34% Similarity=0.599 Sum_probs=220.9
Q ss_pred ceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 3 AKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 3 irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
+++|++ ..+.+|...+.++.|++ +++++++++.||.|++|++.+++.+..+..|...|.++.|++++.+++++
T Consensus 33 i~i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 111 (289)
T cd00200 33 IKVWDLETGELLRTLKGHTGPVRDVAASA-DGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSS 111 (289)
T ss_pred EEEEEeeCCCcEEEEecCCcceeEEEECC-CCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEe
Confidence 566765 46889999999999999 88899999999999999999888888899999999999999998889888
Q ss_pred ECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCE
Q psy467 77 CQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 77 s~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
+.+|.|.+||+.+++....+..|...+.+++|+|++.++++++.|+.|++||+++++.+..+..|...+.+++|+|+++.
T Consensus 112 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 191 (289)
T cd00200 112 SRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEK 191 (289)
T ss_pred cCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCE
Confidence 88999999999999989999889999999999999989888888999999999988988889888889999999999999
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+++++.|+.+.+ ||+..++. +..+..+... +
T Consensus 192 l~~~~~~~~i~i-------------~d~~~~~~--------------------~~~~~~~~~~-------i--------- 222 (289)
T cd00200 192 LLSSSSDGTIKL-------------WDLSTGKC--------------------LGTLRGHENG-------V--------- 222 (289)
T ss_pred EEEecCCCcEEE-------------EECCCCce--------------------ecchhhcCCc-------e---------
Confidence 999999999999 99987665 3333333323 3
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~ 316 (845)
..+.|++++. ++++++.||.|++||+.+++.+.
T Consensus 223 ------------------~~~~~~~~~~-----------------------------~~~~~~~~~~i~i~~~~~~~~~~ 255 (289)
T cd00200 223 ------------------NSVAFSPDGY-----------------------------LLASGSEDGTIRVWDLRTGECVQ 255 (289)
T ss_pred ------------------EEEEEcCCCc-----------------------------EEEEEcCCCcEEEEEcCCceeEE
Confidence 5555665544 88888889999999999999999
Q ss_pred EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 317 TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 317 tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
.+..|...|.+++|++++.+|++++.|+ |++|+
T Consensus 256 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 256 TLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 9999999999999999999999999999 99996
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-30 Score=271.59 Aligned_cols=251 Identities=23% Similarity=0.507 Sum_probs=225.1
Q ss_pred eeeeeEE------eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCC-CCeEEEEEcCCCCEEEEE
Q psy467 4 KVEKAED------FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHS-TPVESVQFGNGEETLSAG 76 (845)
Q Consensus 4 rlw~l~~------L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~-~~V~sLafSpdg~~LaSg 76 (845)
.+|+... +.+|+..|+++.|++ +|.++++|+.+|.|++|+.. .+.++.++.|. ..|++++|+|+...++++
T Consensus 121 tLWNg~~fnFEtilQaHDs~Vr~m~ws~-~g~wmiSgD~gG~iKyWqpn-mnnVk~~~ahh~eaIRdlafSpnDskF~t~ 198 (464)
T KOG0284|consen 121 TLWNGTSFNFETILQAHDSPVRTMKWSH-NGTWMISGDKGGMIKYWQPN-MNNVKIIQAHHAEAIRDLAFSPNDSKFLTC 198 (464)
T ss_pred EEecCceeeHHHHhhhhcccceeEEEcc-CCCEEEEcCCCceEEecccc-hhhhHHhhHhhhhhhheeccCCCCceeEEe
Confidence 3666543 458999999999999 99999999999999999975 44555555554 999999999999999999
Q ss_pred ECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCE
Q psy467 77 CQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 77 s~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
+.||+|+|||....+....+.+|...|.+++|+|....+++|+.|..|++||.+++.|+.++..|...|..+.|+|++++
T Consensus 199 SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~ 278 (464)
T KOG0284|consen 199 SDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNW 278 (464)
T ss_pred cCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCe
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
|++++.|..+++ +|+++.+. +.++.+|... +
T Consensus 279 Llt~skD~~~kv-------------~DiR~mkE--------------------l~~~r~Hkkd-------v--------- 309 (464)
T KOG0284|consen 279 LLTGSKDQSCKV-------------FDIRTMKE--------------------LFTYRGHKKD-------V--------- 309 (464)
T ss_pred eEEccCCceEEE-------------EehhHhHH--------------------HHHhhcchhh-------h---------
Confidence 999999999999 99998777 7777888877 6
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~ 316 (845)
.++.|+|-.. ++|.+|+.||.|..|.+...+++.
T Consensus 310 ------------------~~~~WhP~~~----------------------------~lftsgg~Dgsvvh~~v~~~~p~~ 343 (464)
T KOG0284|consen 310 ------------------TSLTWHPLNE----------------------------SLFTSGGSDGSVVHWVVGLEEPLG 343 (464)
T ss_pred ------------------eeeccccccc----------------------------cceeeccCCCceEEEecccccccc
Confidence 7777877655 289999999999999998666666
Q ss_pred Eec-CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 317 TTE-KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 317 tl~-gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
.+. +|...|++++|+|=|.+|++|+.|. +++|.-.
T Consensus 344 ~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 344 EIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred CCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 655 6899999999999999999999999 9999754
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=276.71 Aligned_cols=311 Identities=19% Similarity=0.298 Sum_probs=254.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
..|+.-+..|..++|+| ...+++++-..|.|++||..-+.++..+..|.++|..++|+|.+.++++|++|..|+||+..
T Consensus 3 tkfEskSsRvKglsFHP-~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk 81 (1202)
T KOG0292|consen 3 TKFESKSSRVKGLSFHP-KRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK 81 (1202)
T ss_pred chhhcccccccceecCC-CCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc
Confidence 34666788999999999 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+.+++.++.+|-..|..+.|++.-.+++++|.|.+|+||+..+++++..+.+|..-|.|.+|+|....+++++-|.+|++
T Consensus 82 ~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRV 161 (1202)
T KOG0292|consen 82 TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRV 161 (1202)
T ss_pred cceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||+..-+.-...+. ++. ..+.++.. -..
T Consensus 162 -------------WDisGLRkk~~~pg------~~e------~~~~~~~~---------------------------~~d 189 (1202)
T KOG0292|consen 162 -------------WDISGLRKKNKAPG------SLE------DQMRGQQG---------------------------NSD 189 (1202)
T ss_pred -------------EeecchhccCCCCC------Cch------hhhhcccc---------------------------chh
Confidence 99875443111110 000 00000000 000
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe--EEEEecCCCCCEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS--LVSTTEKNSSTIR 326 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~--~l~tl~gh~~~Vt 326 (845)
+.+.....+.+--.| |.-+|+.++|+|.-. ++++|+.|..|++|.+..-+ .+.+..+|.+.|+
T Consensus 190 Lfg~~DaVVK~VLEG----------HDRGVNwaAfhpTlp-----liVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVs 254 (1202)
T KOG0292|consen 190 LFGQTDAVVKHVLEG----------HDRGVNWAAFHPTLP-----LIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVS 254 (1202)
T ss_pred hcCCcCeeeeeeecc----------cccccceEEecCCcc-----eEEecCCcceeeEEEeccccceeehhhhcccCCcc
Confidence 000000112221122 234567777777766 99999999999999986543 4667789999999
Q ss_pred EEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE----EEEEeeC
Q psy467 327 RLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQ 387 (845)
Q Consensus 327 slafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d 387 (845)
++-|+|....|++.++|+ |+|||++..+.+.+++...+..+.++.+ ...+++++ +-++..+
T Consensus 255 svlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgHDsGm~VFkle 321 (1202)
T KOG0292|consen 255 SVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGHDSGMIVFKLE 321 (1202)
T ss_pred eEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeecCCceEEEEEc
Confidence 999999999999999999 9999999999999998888999999999 77888887 5555443
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=276.79 Aligned_cols=250 Identities=26% Similarity=0.511 Sum_probs=221.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEEC-CCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl-~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
++++.+|...|.+++|+| ++.++++++.|++|+|||+ ..+..++++.+|...|++++|+|+++.+++|+.|++|+|||
T Consensus 196 ~~~l~~h~~~v~~~~fs~-d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd 274 (456)
T KOG0266|consen 196 LRELSGHTRGVSDVAFSP-DGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWD 274 (456)
T ss_pred hccccccccceeeeEECC-CCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEe
Confidence 345679999999999999 9999999999999999999 66689999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCC--eEEEEEecCCCEEEEEeC
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKS--INSIRFSPDGQWIASGGE 162 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~--V~sLafSPdg~~Lasgs~ 162 (845)
+++++++..+.+|...|++++|++++++|++++.|+.|++||+.++. ++..+..+... +++++|+|++.++++++.
T Consensus 275 ~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~ 354 (456)
T KOG0266|consen 275 VRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASL 354 (456)
T ss_pred ccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecC
Confidence 99999999999999999999999999999999999999999999998 56777666555 999999999999999999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
|+.+++ ||+..+.. +..+.+|... ...+
T Consensus 355 d~~~~~-------------w~l~~~~~--------------------~~~~~~~~~~----~~~~--------------- 382 (456)
T KOG0266|consen 355 DRTLKL-------------WDLRSGKS--------------------VGTYTGHSNL----VRCI--------------- 382 (456)
T ss_pred CCeEEE-------------EEccCCcc--------------------eeeecccCCc----ceeE---------------
Confidence 999999 99998888 6666665543 0011
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC-
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN- 321 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh- 321 (845)
.....++.+. ++++|+.|+.|++||+.++..+..+.+|
T Consensus 383 ------------~~~~~~~~~~-----------------------------~i~sg~~d~~v~~~~~~s~~~~~~l~~h~ 421 (456)
T KOG0266|consen 383 ------------FSPTLSTGGK-----------------------------LIYSGSEDGSVYVWDSSSGGILQRLEGHS 421 (456)
T ss_pred ------------ecccccCCCC-----------------------------eEEEEeCCceEEEEeCCccchhhhhcCCC
Confidence 2233344555 9999999999999999999999999999
Q ss_pred CCCEEEEEEeCCCCEEEEEe--CCC-EEEEEec
Q psy467 322 SSTIRRLTFSEGGECLLGGD--TEG-LKVYGWE 351 (845)
Q Consensus 322 ~~~VtslafSpdG~~Lasgs--~DG-I~IWDl~ 351 (845)
...+..+.+++...++++++ .|+ +++|..+
T Consensus 422 ~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 422 KAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred CCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 88999999999999999998 566 9999754
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=259.15 Aligned_cols=283 Identities=19% Similarity=0.318 Sum_probs=233.8
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC---eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS---NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~---~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
..+.|..|.+.|+-+.||+ +|++||+++.|.+..+|.+... +..+++.+|..+|..+.||||.++|++++.+..+.
T Consensus 216 t~qil~~htdEVWfl~FS~-nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~ 294 (519)
T KOG0293|consen 216 TWQILQDHTDEVWFLQFSH-NGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLS 294 (519)
T ss_pred hhhhHhhCCCcEEEEEEcC-CCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHhee
Confidence 3567889999999999999 9999999999999999987543 45788999999999999999999999999999999
Q ss_pred EEECCCCcEEEEEc-CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCC-CCCeEEEEEecCCCEEEEEe
Q psy467 84 IWNLAVPTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH-SKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 84 VWDl~tg~~v~~l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h-~~~V~sLafSPdg~~Lasgs 161 (845)
+||+.+|.....+. ++...+.+++|.|||..+++|+.|++|..||+. |..+..+++. ...|.+++.++||+++++.+
T Consensus 295 lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~ 373 (519)
T KOG0293|consen 295 LWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVT 373 (519)
T ss_pred eccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEe
Confidence 99999999888775 346789999999999999999999999999986 5556555543 35699999999999999999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
.|..+++ |+..+... ......
T Consensus 374 ~d~~i~l-------------~~~e~~~d--------------------r~lise-------------------------- 394 (519)
T KOG0293|consen 374 VDKKIRL-------------YNREARVD--------------------RGLISE-------------------------- 394 (519)
T ss_pred cccceee-------------echhhhhh--------------------hccccc--------------------------
Confidence 9999999 88765444 111111
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN 321 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh 321 (845)
..+|+++++|.|++ ++.+.-.+..+++||+...+.+..+.||
T Consensus 395 ---------------------------------~~~its~~iS~d~k-----~~LvnL~~qei~LWDl~e~~lv~kY~Gh 436 (519)
T KOG0293|consen 395 ---------------------------------EQPITSFSISKDGK-----LALVNLQDQEIHLWDLEENKLVRKYFGH 436 (519)
T ss_pred ---------------------------------cCceeEEEEcCCCc-----EEEEEcccCeeEEeecchhhHHHHhhcc
Confidence 12334444444444 8888888999999999999999999998
Q ss_pred CCC--EEEEEEeC-CCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc--CCceEEEE-----EEEEeeCC
Q psy467 322 SST--IRRLTFSE-GGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT--GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 322 ~~~--VtslafSp-dG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS--dg~lLaaS-----VsiW~~d~ 388 (845)
... +-.-||-- +..++++|++|+ |+||+..+|+++..+.||...|++|+|+ +-..+|.+ |++|..+.
T Consensus 437 kq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 437 KQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred cccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 543 44455654 568999999999 9999999999999999999999999999 44444444 99998653
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-28 Score=255.36 Aligned_cols=252 Identities=26% Similarity=0.413 Sum_probs=234.6
Q ss_pred cceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-CeeEEEecCCCCCeEEEEEcCCCCEEE
Q psy467 2 RAKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-SNCIMSLSGHSTPVESVQFGNGEETLS 74 (845)
Q Consensus 2 ~irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-~~~i~~l~~h~~~V~sLafSpdg~~La 74 (845)
++++|+. ..++||.++|..++|+. .|.++|+++.|-.+.+||.++ .++++.+.+|...|.+++|-|.|++|+
T Consensus 131 tikv~D~~tg~~e~~LrGHt~sv~di~~~a-~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~il 209 (406)
T KOG0295|consen 131 TIKVFDTETGELERSLRGHTDSVFDISFDA-SGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHIL 209 (406)
T ss_pred eEEEEEccchhhhhhhhccccceeEEEEec-CccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeee
Confidence 4566664 46899999999999998 999999999998899999976 577888899999999999999999999
Q ss_pred EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC-
Q psy467 75 AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD- 153 (845)
Q Consensus 75 Sgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd- 153 (845)
+++.|.+|+.|++.+|-++.++.+|...|..++.+.||..+++++.|.+|++|-+.++++...++.|..+|.|++|.|.
T Consensus 210 S~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~ 289 (406)
T KOG0295|consen 210 SCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPES 289 (406)
T ss_pred ecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999772
Q ss_pred --------------CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCC
Q psy467 154 --------------GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPG 219 (845)
Q Consensus 154 --------------g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~ 219 (845)
+.++.+++.|++|++ ||+.++.+ +.++.+|...
T Consensus 290 ~~~~i~~at~~~~~~~~l~s~SrDktIk~-------------wdv~tg~c--------------------L~tL~ghdnw 336 (406)
T KOG0295|consen 290 SYPSISEATGSTNGGQVLGSGSRDKTIKI-------------WDVSTGMC--------------------LFTLVGHDNW 336 (406)
T ss_pred cCcchhhccCCCCCccEEEeecccceEEE-------------EeccCCeE--------------------EEEEecccce
Confidence 258999999999999 99999999 9999999888
Q ss_pred CccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe
Q psy467 220 GTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS 299 (845)
Q Consensus 220 ~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs 299 (845)
| ..++|+|.|+ +|+++.
T Consensus 337 -------V---------------------------r~~af~p~Gk-----------------------------yi~Sca 353 (406)
T KOG0295|consen 337 -------V---------------------------RGVAFSPGGK-----------------------------YILSCA 353 (406)
T ss_pred -------e---------------------------eeeEEcCCCe-----------------------------EEEEEe
Confidence 7 7777777777 999999
Q ss_pred CCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 300 ADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 300 ~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
.|+++++||+++++++.++..|..-|+++.|..+-.++++|+-|. +++|.-
T Consensus 354 DDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 354 DDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred cCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 999999999999999999999999999999999999999999999 999963
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-26 Score=260.75 Aligned_cols=364 Identities=20% Similarity=0.298 Sum_probs=274.7
Q ss_pred ceeeeeEEe--------ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEE
Q psy467 3 AKVEKAEDF--------MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS 74 (845)
Q Consensus 3 irlw~l~~L--------~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~La 74 (845)
+.+|++++= ..-...|+|+.-++ +..+||+|-.||.|+||+..+.....++.+|...|+++.|+..|..|+
T Consensus 45 vn~WdlRtge~~~~l~~~~~k~evt~l~~~~-d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rla 123 (888)
T KOG0306|consen 45 VNIWDLRTGEIEKKLILLKKKAEVTCLRSSD-DILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLA 123 (888)
T ss_pred EeEEeeecchhhhhhhhhcccceEEEeeccC-CcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEe
Confidence 457776542 23446899999998 889999999999999999999999999999999999999999999999
Q ss_pred EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC
Q psy467 75 AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 75 Sgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg 154 (845)
+|+.|+.|.+||+-...-...+.+|+..|+.+-|..+.+++++.+.|+.|++||+.+..|..+.-.|.+.++++++++
T Consensus 124 SGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~-- 201 (888)
T KOG0306|consen 124 SGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE-- 201 (888)
T ss_pred ecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec--
Confidence 999999999999988888889999999999999998889999999999999999999999999999999999999996
Q ss_pred CEEEEEeCCCcEEEeeee--------------------------------------------------------------
Q psy467 155 QWIASGGEDGVVRIGASF-------------------------------------------------------------- 172 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~-------------------------------------------------------------- 172 (845)
+.+++++.|+.+.+|...
T Consensus 202 ~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k 281 (888)
T KOG0306|consen 202 KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAK 281 (888)
T ss_pred ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHH
Confidence 778888888888886540
Q ss_pred ----------------------------------------------------------ccCCceeEEEECCC-CccCCC-
Q psy467 173 ----------------------------------------------------------HLTNTSIHVVDLSL-VHPLGT- 192 (845)
Q Consensus 173 ----------------------------------------------------------~~~~~~I~vWDl~t-g~~l~~- 192 (845)
...+..+.+|.+.. +.....
T Consensus 282 ~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~ 361 (888)
T KOG0306|consen 282 ILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEA 361 (888)
T ss_pred HHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccc
Confidence 00111222222222 000000
Q ss_pred ---------CCCCCCcceeecCCCCeEEE--------EecCCCC-------------------------CccceeeEeee
Q psy467 193 ---------PPPQYTSSVPFSHNTSLRKS--------FTKGRPG-------------------------GTKAKIDVTRI 230 (845)
Q Consensus 193 ---------~~~~~i~svs~spdg~~l~~--------~~~h~~~-------------------------~~~~~i~V~~i 230 (845)
.+...++.++++.+...+.+ +..+... ...+.+.++++
T Consensus 362 ~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdl 441 (888)
T KOG0306|consen 362 DRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDL 441 (888)
T ss_pred cccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEe
Confidence 01233455555555433322 1111100 00001111111
Q ss_pred cccccccccccchhhhhhcc--CCCceeEEEcCCCCcC------------------------------CCCcccccccCc
Q psy467 231 EENAESEDQAGEEELFATIA--NPCDYSAIFQPHRSLN------------------------------RSGTCVPVSVSR 278 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~--~~~~~~l~fspdg~~~------------------------------~~~~~~~~~~~I 278 (845)
... .+..+.. ....+.++.+|++.-. .....+.....|
T Consensus 442 aS~----------~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddv 511 (888)
T KOG0306|consen 442 ASA----------SLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDV 511 (888)
T ss_pred ehh----------hhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccE
Confidence 111 1111111 2334666666665511 111334557788
Q ss_pred eeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEE
Q psy467 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYD 357 (845)
Q Consensus 279 ~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~ 357 (845)
.++.+||||+ +||++--|++|+||-+++.+..-.+.||.-||.|+..|||++.+++|+.|. |+||-++-|.|.+
T Consensus 512 L~v~~Spdgk-----~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHK 586 (888)
T KOG0306|consen 512 LCVSVSPDGK-----LLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHK 586 (888)
T ss_pred EEEEEcCCCc-----EEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhh
Confidence 9999999999 999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EecCCCCCeEEEEEc-CCceEEEE-----EEEE
Q psy467 358 AQPMGWGKVQDLAVT-GTQLWFRR-----VGTW 384 (845)
Q Consensus 358 tl~~h~~~VtsVafS-dg~lLaaS-----VsiW 384 (845)
++-+|.+.|.+|.|- ...++.++ |..|
T Consensus 587 S~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqW 619 (888)
T KOG0306|consen 587 SFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQW 619 (888)
T ss_pred hhhcccCceeEEEEcccceeEEEecCcceEEee
Confidence 999999999999999 55555555 7888
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-25 Score=252.04 Aligned_cols=282 Identities=24% Similarity=0.368 Sum_probs=251.3
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-----------------------Cee-----------EEEe
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-----------------------SNC-----------IMSL 54 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-----------------------~~~-----------i~~l 54 (845)
..|.+|.+.|.++-|.. +..-+.|.+.||.+.+|.... ++. ..-+
T Consensus 183 ~~l~gHkd~VvacfF~~-~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~l 261 (893)
T KOG0291|consen 183 YALNGHKDYVVACFFGA-NSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYL 261 (893)
T ss_pred EeccCCCcceEEEEecc-CcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeee
Confidence 46789999999999998 888899999999999998750 111 1112
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC-CeEEEEECCCCc
Q psy467 55 SGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD-SFIKLWDLRRKG 133 (845)
Q Consensus 55 ~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D-G~I~IWDl~t~~ 133 (845)
......|++.+|++..+.||+|-..|...++.+....+++.+.-...+|..++|+..|.+|+.|+.. |++.||+..+..
T Consensus 262 n~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEs 341 (893)
T KOG0291|consen 262 NQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSES 341 (893)
T ss_pred cccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccc
Confidence 2234789999999999999999999999999999999999998888899999999999999998765 899999999988
Q ss_pred eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEE
Q psy467 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSF 213 (845)
Q Consensus 134 ~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~ 213 (845)
.+....+|...+.+++++|||+++|+|++||.|++ ||..++-+ +.+|
T Consensus 342 YVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKv-------------Wn~~SgfC--------------------~vTF 388 (893)
T KOG0291|consen 342 YVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKV-------------WNTQSGFC--------------------FVTF 388 (893)
T ss_pred eeeeccccccceeeEEECCCCcEEEeccCCCcEEE-------------EeccCceE--------------------EEEe
Confidence 88888999999999999999999999999999999 99999999 8999
Q ss_pred ecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccce
Q psy467 214 TKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFI 293 (845)
Q Consensus 214 ~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~ 293 (845)
..|... | +.+.|+..++
T Consensus 389 teHts~-------V---------------------------t~v~f~~~g~----------------------------- 405 (893)
T KOG0291|consen 389 TEHTSG-------V---------------------------TAVQFTARGN----------------------------- 405 (893)
T ss_pred ccCCCc-------e---------------------------EEEEEEecCC-----------------------------
Confidence 999888 7 7788888777
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCC-CCCEEEEEEeCCCCEEEEEeCCC--EEEEEecCCceEEEecCCCCCeEEEE
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKN-SSTIRRLTFSEGGECLLGGDTEG--LKVYGWEPARQYDAQPMGWGKVQDLA 370 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh-~~~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk~l~tl~~h~~~VtsVa 370 (845)
.+++.+-||+|+.||+......+++... .....|++..|.|..+.+|+.|. |.||++++|+++..+.||.++|.+++
T Consensus 406 ~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~ 485 (893)
T KOG0291|consen 406 VLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLS 485 (893)
T ss_pred EEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeE
Confidence 9999999999999999999999998863 34567888999999999999999 99999999999999999999999999
Q ss_pred Ec-CCceEEEE-----EEEEeeC
Q psy467 371 VT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 371 fS-dg~lLaaS-----VsiW~~d 387 (845)
|+ ++..|+.+ |.+|.+=
T Consensus 486 f~~~~~~LaS~SWDkTVRiW~if 508 (893)
T KOG0291|consen 486 FSPDGSLLASGSWDKTVRIWDIF 508 (893)
T ss_pred EccccCeEEeccccceEEEEEee
Confidence 99 88888887 9999663
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-26 Score=230.09 Aligned_cols=272 Identities=20% Similarity=0.308 Sum_probs=224.0
Q ss_pred cceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe--eEEEecCCCCCeEEEEEcCCCCEE
Q psy467 2 RAKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETL 73 (845)
Q Consensus 2 ~irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSpdg~~L 73 (845)
+||+|.+ +++...++.|+.+...| ++..||+++.. .|++||+.+++ ++.++.+|+..|.++.|..+|+++
T Consensus 21 TIRfWqa~tG~C~rTiqh~dsqVNrLeiTp-dk~~LAaa~~q-hvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWM 98 (311)
T KOG0315|consen 21 TIRFWQALTGICSRTIQHPDSQVNRLEITP-DKKDLAAAGNQ-HVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWM 98 (311)
T ss_pred eeeeeehhcCeEEEEEecCccceeeEEEcC-CcchhhhccCC-eeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEE
Confidence 6899985 56777788999999999 89999998764 89999997765 589999999999999999999999
Q ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-CCCCeEEEEEec
Q psy467 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKSINSIRFSP 152 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~~~V~sLafSP 152 (845)
++|+.||+++|||++...+.+.++ |..+|+++..+|+...|++|..+|.|++||+.+..+...+.. ....|.++...|
T Consensus 99 yTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~ 177 (311)
T KOG0315|consen 99 YTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMP 177 (311)
T ss_pred EecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcC
Confidence 999999999999999977777776 779999999999999999999999999999998877666543 456899999999
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--------CCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--------PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--------~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
||.+++.+...|..++ |++-+......+ +...+..+.+||+++++++.... ..
T Consensus 178 dgsml~a~nnkG~cyv-------------W~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssd------kt 238 (311)
T KOG0315|consen 178 DGSMLAAANNKGNCYV-------------WRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSD------KT 238 (311)
T ss_pred CCcEEEEecCCccEEE-------------EEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCC------ce
Confidence 9999999999999999 998775443322 25667788999999999875332 12
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+.| |+.++.+........+...+...+||.||+ +|++|+.|+.+
T Consensus 239 v~i-------------------------------wn~~~~~kle~~l~gh~rWvWdc~FS~dg~-----YlvTassd~~~ 282 (311)
T KOG0315|consen 239 VKI-------------------------------WNTDDFFKLELVLTGHQRWVWDCAFSADGE-----YLVTASSDHTA 282 (311)
T ss_pred EEE-------------------------------EecCCceeeEEEeecCCceEEeeeeccCcc-----EEEecCCCCce
Confidence 223 333333111222233446788999999999 99999999999
Q ss_pred EEEECCCCeEEEEecCCCCCEEEEEEe
Q psy467 305 NFWDLEKFSLVSTTEKNSSTIRRLTFS 331 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh~~~VtslafS 331 (845)
++||+..++.+..+.+|.....|++..
T Consensus 283 rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 283 RLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred eecccccCceeeecCCcccccEEEEee
Confidence 999999999999999998888887754
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=264.09 Aligned_cols=255 Identities=24% Similarity=0.453 Sum_probs=223.0
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
.|++|+ +..|.+|+++|..++|+| .+.++++||+|.+|+||+..+.+++.++.+|-+.|..+.|++.-.+|++
T Consensus 32 ~IQlWDYRM~tli~rFdeHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlS 110 (1202)
T KOG0292|consen 32 VIQLWDYRMGTLIDRFDEHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILS 110 (1202)
T ss_pred eeeeehhhhhhHHhhhhccCCccceeeecC-CCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEE
Confidence 467887 457999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC--------C---------------
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR--------K--------------- 132 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t--------~--------------- 132 (845)
+|+|.+|+||++.+++++..+.+|...|.|..|+|....++++|-|.+|++||+.. +
T Consensus 111 ASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dL 190 (1202)
T KOG0292|consen 111 ASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDL 190 (1202)
T ss_pred ccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhh
Confidence 99999999999999999999999999999999999999999999999999999841 1
Q ss_pred ----c--eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCC
Q psy467 133 ----G--CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHN 206 (845)
Q Consensus 133 ----~--~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spd 206 (845)
. ..+.+.+|...|+-++|+|.-.++++|+.|..|++ |.+...+...
T Consensus 191 fg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKl-------------WrmnetKaWE--------------- 242 (1202)
T KOG0292|consen 191 FGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKL-------------WRMNETKAWE--------------- 242 (1202)
T ss_pred cCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeE-------------EEecccccee---------------
Confidence 0 22446789999999999999999999999999999 8776544311
Q ss_pred CCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 207 TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 207 g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
+.+..+|... | .++.|+|...
T Consensus 243 ---vDtcrgH~nn-------V---------------------------ssvlfhp~q~---------------------- 263 (1202)
T KOG0292|consen 243 ---VDTCRGHYNN-------V---------------------------SSVLFHPHQD---------------------- 263 (1202)
T ss_pred ---ehhhhcccCC-------c---------------------------ceEEecCccc----------------------
Confidence 2334455555 4 5666666555
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEec
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~ 351 (845)
++++.+.|++|+|||+...+.++++....+.-+.++-+|..+++|+|-+.|+.||.++
T Consensus 264 -------lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgHDsGm~VFkle 321 (1202)
T KOG0292|consen 264 -------LILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGHDSGMIVFKLE 321 (1202)
T ss_pred -------eeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeecCCceEEEEEc
Confidence 9999999999999999999999999877888999999999999988888777777766
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-25 Score=236.59 Aligned_cols=288 Identities=19% Similarity=0.256 Sum_probs=228.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
+-++.+|...|+|+.||. +|.+||||+-+|.|.||+..++.....+...-..|.-+.|+|.+..|++|+.||.|.+|.+
T Consensus 99 ~~eltgHKDSVt~~~Fsh-dgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~i 177 (399)
T KOG0296|consen 99 AGELTGHKDSVTCCSFSH-DGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQI 177 (399)
T ss_pred eeEecCCCCceEEEEEcc-CceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEEC
Confidence 357999999999999999 9999999999999999999999998888777788999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-CCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
.++...+.+.+|..++++=.|.|+|+.++++..||+|++||..+++++..+.. ......++.++.++..++.|..++.+
T Consensus 178 p~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~ 257 (399)
T KOG0296|consen 178 PSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVA 257 (399)
T ss_pred CCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccE
Confidence 99888999999999999999999999999999999999999999999988874 34467789999999999999999999
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCC----------CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTP----------PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~----------~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
++ -+..+|+.+... ....+.++.+.|-...+.... .++.++.+.+|++..
T Consensus 258 ~~-------------~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A---~G~vdG~i~iyD~a~---- 317 (399)
T KOG0296|consen 258 CG-------------VNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAA---CGSVDGTIAIYDLAA---- 317 (399)
T ss_pred EE-------------EccccceEEEecCCCCccccccchhhhhhhhhcccccccchhh---cccccceEEEEeccc----
Confidence 98 444444432111 112222333322221111111 111122222322111
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~ 316 (845)
. +-.....+..+|..+.|-+ .. +|++++.+|.|+.||.++|+++.
T Consensus 318 ---------------------------~--~~R~~c~he~~V~~l~w~~-t~-----~l~t~c~~g~v~~wDaRtG~l~~ 362 (399)
T KOG0296|consen 318 ---------------------------S--TLRHICEHEDGVTKLKWLN-TD-----YLLTACANGKVRQWDARTGQLKF 362 (399)
T ss_pred ---------------------------c--hhheeccCCCceEEEEEcC-cc-----hheeeccCceEEeeeccccceEE
Confidence 0 1122334566788999988 44 89999999999999999999999
Q ss_pred EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 317 TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 317 tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
++.||...|.+++++|+++++++++.|+ .+||+..
T Consensus 363 ~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 363 TYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 9999999999999999999999999999 8988764
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-26 Score=257.70 Aligned_cols=283 Identities=19% Similarity=0.333 Sum_probs=249.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
-++.||...|.++++|. +...+++|+ .+.|+||+..+.++++++... .+.+..|-|.++++++|...|.+.++|+.
T Consensus 367 i~~~GHR~dVRsl~vS~-d~~~~~Sga-~~SikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdla 442 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSS-DSILLASGA-GESIKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLA 442 (888)
T ss_pred eeeccchhheeEEEeec-CceeeeecC-CCcEEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEee
Confidence 35789999999999997 666666665 568999999999999999843 89999999999999999999999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-----CceEE--EEc-----CCCCCeEEEEEecCCCE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-----KGCIY--TYR-----GHSKSINSIRFSPDGQW 156 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-----~~~l~--~~~-----~h~~~V~sLafSPdg~~ 156 (845)
+...+.+++.|.+.|+.++.+||++.+++|+.|.+|++||..- +.... .++ .....|.|+.+||||++
T Consensus 443 S~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~ 522 (888)
T KOG0306|consen 443 SASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKL 522 (888)
T ss_pred hhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcE
Confidence 9999999999999999999999999999999999999999731 11111 111 24567999999999999
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
|+++--|.++++ |-+.+.+. ...+.||.-+ |
T Consensus 523 LaVsLLdnTVkV-------------yflDtlKF--------------------flsLYGHkLP-------V--------- 553 (888)
T KOG0306|consen 523 LAVSLLDNTVKV-------------YFLDTLKF--------------------FLSLYGHKLP-------V--------- 553 (888)
T ss_pred EEEEeccCeEEE-------------EEecceee--------------------eeeecccccc-------e---------
Confidence 999999999999 88888776 6777888877 6
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~ 316 (845)
.++..+||++ +++|||.|..|++|-++-|.|-+
T Consensus 554 ------------------~smDIS~DSk-----------------------------livTgSADKnVKiWGLdFGDCHK 586 (888)
T KOG0306|consen 554 ------------------LSMDISPDSK-----------------------------LIVTGSADKNVKIWGLDFGDCHK 586 (888)
T ss_pred ------------------eEEeccCCcC-----------------------------eEEeccCCCceEEeccccchhhh
Confidence 7777777777 99999999999999999999999
Q ss_pred EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 317 TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 317 tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
.+-+|...|.++.|-|...++++++.|+ |+-||-+.-++++.+.+|...|++++.+ +|.+++.+ +..|..+.+
T Consensus 587 S~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~tde 666 (888)
T KOG0306|consen 587 SFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTDE 666 (888)
T ss_pred hhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccCc
Confidence 9999999999999999999999999999 9999999999999999999999999999 89888888 899977665
Q ss_pred CC
Q psy467 390 GF 391 (845)
Q Consensus 390 ~~ 391 (845)
.+
T Consensus 667 ~~ 668 (888)
T KOG0306|consen 667 IL 668 (888)
T ss_pred ce
Confidence 43
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=243.23 Aligned_cols=250 Identities=23% Similarity=0.354 Sum_probs=228.0
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEE
Q psy467 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 49 ~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWD 128 (845)
+..+.+++|.+.|.|+++.|.++++++|+.|++++|||+.+|++..++.+|...|..+++++--.|+++++.|+.|+.||
T Consensus 142 Kl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwD 221 (460)
T KOG0285|consen 142 KLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWD 221 (460)
T ss_pred eehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEe
Confidence 44566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 129 l~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
++..+.++.+.+|-..|.|++.+|.-..|++|+.|.++++ ||+++...
T Consensus 222 Le~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~Rv-------------WDiRtr~~------------------- 269 (460)
T KOG0285|consen 222 LEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRV-------------WDIRTRAS------------------- 269 (460)
T ss_pred chhhhhHHHhccccceeEEEeccccceeEEecCCcceEEE-------------eeecccce-------------------
Confidence 9999999999999999999999999999999999999999 99999988
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSP 288 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~ 288 (845)
+.++.+|... | ..+.+.|...
T Consensus 270 -V~~l~GH~~~-------V---------------------------~~V~~~~~dp------------------------ 290 (460)
T KOG0285|consen 270 -VHVLSGHTNP-------V---------------------------ASVMCQPTDP------------------------ 290 (460)
T ss_pred -EEEecCCCCc-------c---------------------------eeEEeecCCC------------------------
Confidence 8899999988 7 7777777666
Q ss_pred cccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecCCCCCeEE
Q psy467 289 MLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMGWGKVQD 368 (845)
Q Consensus 289 ~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~h~~~Vts 368 (845)
.+++|+.|++|++||+..++...++..|...|.+++.+|....+|+++.|.|+-|++..|..+..+.+|...|++
T Consensus 291 -----qvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsgh~~iint 365 (460)
T KOG0285|consen 291 -----QVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSGHNAIINT 365 (460)
T ss_pred -----ceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccccccceeee
Confidence 799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEc-CCceEEEE----EEEEee-CCCCCccc
Q psy467 369 LAVT-GTQLWFRR----VGTWSH-QDSGFSTL 394 (845)
Q Consensus 369 VafS-dg~lLaaS----VsiW~~-d~~~~~~~ 394 (845)
++.. ||-+++.+ +..|.. ++.++...
T Consensus 366 l~~nsD~v~~~G~dng~~~fwdwksg~nyQ~~ 397 (460)
T KOG0285|consen 366 LSVNSDGVLVSGGDNGSIMFWDWKSGHNYQRG 397 (460)
T ss_pred eeeccCceEEEcCCceEEEEEecCcCcccccc
Confidence 9999 66666655 555644 34444433
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=264.84 Aligned_cols=255 Identities=19% Similarity=0.368 Sum_probs=205.0
Q ss_pred eEEec-cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC--------------------------------C------
Q psy467 8 AEDFM-AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK--------------------------------S------ 48 (845)
Q Consensus 8 l~~L~-gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t--------------------------------~------ 48 (845)
.+.+. +|.+.|+|+.||+ +|+|||+||.||.|+||.+.. .
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s 337 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS 337 (712)
T ss_pred eeccccccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence 46677 9999999999999 999999999999999998744 0
Q ss_pred ----------------------eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEE
Q psy467 49 ----------------------NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV 106 (845)
Q Consensus 49 ----------------------~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~l 106 (845)
+++..+.||.+.|..|.||.+ ++|++++.|.+|++|++....+++.|. |..-|+|+
T Consensus 338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcV 415 (712)
T KOG0283|consen 338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCV 415 (712)
T ss_pred ccccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCeeEEE
Confidence 122344579999999999975 689999999999999999999999998 99999999
Q ss_pred EEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECC
Q psy467 107 DFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLS 185 (845)
Q Consensus 107 afsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~ 185 (845)
+|+| |.+||++|+-||.|+||++...+.+.-.. -..-|++++|.|||++.++|+.+|.+++ |+..
T Consensus 416 aFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~lITAvcy~PdGk~avIGt~~G~C~f-------------Y~t~ 481 (712)
T KOG0283|consen 416 AFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND-LRDLITAVCYSPDGKGAVIGTFNGYCRF-------------YDTE 481 (712)
T ss_pred EecccCCCcEeecccccceEEeecCcCeeEeehh-hhhhheeEEeccCCceEEEEEeccEEEE-------------EEcc
Confidence 9999 77999999999999999998766655544 4578999999999999999999999999 9987
Q ss_pred CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCc
Q psy467 186 LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSL 265 (845)
Q Consensus 186 tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~ 265 (845)
..+. ...+. +..+...
T Consensus 482 ~lk~--------------------~~~~~------------------------------------------I~~~~~K-- 497 (712)
T KOG0283|consen 482 GLKL--------------------VSDFH------------------------------------------IRLHNKK-- 497 (712)
T ss_pred CCeE--------------------EEeee------------------------------------------EeeccCc--
Confidence 6555 11111 1111100
Q ss_pred CCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCC--CEEEEEEeCCCCEEEEEeCC
Q psy467 266 NRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSS--TIRRLTFSEGGECLLGGDTE 343 (845)
Q Consensus 266 ~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~--~VtslafSpdG~~Lasgs~D 343 (845)
...+. .|+.+.|.|.... -+++.+.|..|+|||.++..++..|+|+.. .=....|+.||++|+++++|
T Consensus 498 -----k~~~~-rITG~Q~~p~~~~----~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seD 567 (712)
T KOG0283|consen 498 -----KKQGK-RITGLQFFPGDPD----EVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASED 567 (712)
T ss_pred -----cccCc-eeeeeEecCCCCC----eEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecC
Confidence 01111 4666666654432 477778999999999999999999997532 34567899999999999999
Q ss_pred C-EEEEEecCC
Q psy467 344 G-LKVYGWEPA 353 (845)
Q Consensus 344 G-I~IWDl~tg 353 (845)
. |+||+++..
T Consensus 568 s~VYiW~~~~~ 578 (712)
T KOG0283|consen 568 SWVYIWKNDSF 578 (712)
T ss_pred ceEEEEeCCCC
Confidence 9 999998654
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-26 Score=230.58 Aligned_cols=272 Identities=19% Similarity=0.335 Sum_probs=233.6
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE--ecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS--LSGHSTPVESVQFGN-GEETLSAGCQSGSIKIW 85 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~--l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VW 85 (845)
+++.+|.+.|.+++|+. +|..||+|+.|+++.+|+++..+.... ..+|.+.|..++|+| ....+++++.|.+|++|
T Consensus 14 r~~~~~~~~v~Sv~wn~-~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~w 92 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNC-DGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIW 92 (313)
T ss_pred HHhhhhhhcceEEEEcc-cCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEE
Confidence 46789999999999999 999999999999999999987755543 467999999999998 56789999999999999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
|++.+++...+....+.+ .+.|+|+|.++++++.|..|.+.|.++.+...... ....+..++|+.++++++.....|.
T Consensus 93 d~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~ 170 (313)
T KOG1407|consen 93 DIRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGC 170 (313)
T ss_pred EeccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecCCce
Confidence 999999999987555544 58999999999999999999999999887776655 4556788999988888777777799
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
|.| ......++ +..+..|... .
T Consensus 171 v~I-------------LsypsLkp--------------------v~si~AH~sn-------C------------------ 192 (313)
T KOG1407|consen 171 VEI-------------LSYPSLKP--------------------VQSIKAHPSN-------C------------------ 192 (313)
T ss_pred EEE-------------Eecccccc--------------------ccccccCCcc-------e------------------
Confidence 999 76666666 5666666654 4
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCE
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTI 325 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~V 325 (845)
.++.|+|+|+ ++|+|+.|..+.+||+...-|++.+..+.-+|
T Consensus 193 ---------icI~f~p~Gr-----------------------------yfA~GsADAlvSLWD~~ELiC~R~isRldwpV 234 (313)
T KOG1407|consen 193 ---------ICIEFDPDGR-----------------------------YFATGSADALVSLWDVDELICERCISRLDWPV 234 (313)
T ss_pred ---------EEEEECCCCc-----------------------------eEeeccccceeeccChhHhhhheeeccccCce
Confidence 6666777766 99999999999999999999999999999999
Q ss_pred EEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEcCCceEEEE
Q psy467 326 RRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVTGTQLWFRR 380 (845)
Q Consensus 326 tslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafSdg~lLaaS 380 (845)
..+.||.||++||+|++|. |-|=++++|..+..++ +.++...|+|++.+.|.+.
T Consensus 235 RTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAy 289 (313)
T KOG1407|consen 235 RTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAY 289 (313)
T ss_pred EEEEeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeE
Confidence 9999999999999999999 9999999999888776 7788999999977666655
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=248.78 Aligned_cols=316 Identities=17% Similarity=0.305 Sum_probs=260.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
+..|.||.+.|.|++=+|..-..+|+|+.||.|+|||+...+++.++..|.+.|..|++.. ..++++++|.+|+.|.+
T Consensus 59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~ 136 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKI 136 (433)
T ss_pred hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeec
Confidence 3467899999999999994447899999999999999999999999999999999999987 67888889999999998
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC-CEEEEEeCCCcE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVV 166 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg-~~Lasgs~DG~I 166 (845)
+. .+.+++. ....+..+.-+..+..++|++. .|.|||.....++.++.-....|.++.|+|-. ..|++++.|+.|
T Consensus 137 ~~-~p~~til-g~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsI 212 (433)
T KOG0268|consen 137 DG-PPLHTIL-GKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSI 212 (433)
T ss_pred cC-Ccceeee-ccccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCce
Confidence 75 4677776 3456778887777888999886 59999999889999998888889999999954 567777799999
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
.+ ||++++.+ +..+.-....
T Consensus 213 vL-------------yD~R~~~P--------------------l~KVi~~mRT--------------------------- 232 (433)
T KOG0268|consen 213 VL-------------YDLRQASP--------------------LKKVILTMRT--------------------------- 232 (433)
T ss_pred EE-------------EecccCCc--------------------cceeeeeccc---------------------------
Confidence 99 99999888 3332111111
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCCE
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSSTI 325 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~V 325 (845)
..++|+|... .+++|+.|..++.||++.. .++....+|.+.|
T Consensus 233 --------N~IswnPeaf-----------------------------nF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV 275 (433)
T KOG0268|consen 233 --------NTICWNPEAF-----------------------------NFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAV 275 (433)
T ss_pred --------cceecCcccc-----------------------------ceeeccccccceehhhhhhcccchhhcccceeE
Confidence 5567777555 7899999999999999875 5688888999999
Q ss_pred EEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC-CCCCeEEEEEc-CCceEEEE-----EEEEeeCC-CCCccccC
Q psy467 326 RRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM-GWGKVQDLAVT-GTQLWFRR-----VGTWSHQD-SGFSTLDS 396 (845)
Q Consensus 326 tslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~-h~~~VtsVafS-dg~lLaaS-----VsiW~~d~-~~~~~~~~ 396 (845)
.++.|||.|+-+++|+.|. |+||....+.....+.. .-..|.+|.|| |.++|+.+ |.+|.-.. +.+..+.+
T Consensus 276 ~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Aseklgv~t~ 355 (433)
T KOG0268|consen 276 MDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKLGVITP 355 (433)
T ss_pred EEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhhcCCCCh
Confidence 9999999999999999999 99999998876655543 23679999999 99999998 99996432 22221111
Q ss_pred CCCCCCCCCCCCCccccccCCCCCCccCCccccCCCcccccCCCCcCChhHHHHHHhhchHHHHHHHHHhh
Q psy467 397 YSAGSPVSTMGRERDQIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNRQ 467 (845)
Q Consensus 397 ~~~~~p~~~~~~~~~~~vp~~~~~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~l~~R~ 467 (845)
- -+..+-.++.+++.++.|+++..|.++|+
T Consensus 356 r-----------------------------------------Ek~~~~Y~e~Lke~y~~~peIkRIarHR~ 385 (433)
T KOG0268|consen 356 R-----------------------------------------EKNKLEYNEALKERYKHLPEIKRIARHRH 385 (433)
T ss_pred h-----------------------------------------HHHHHHHHHHHHHHHhhcHHHHHHHhhcc
Confidence 1 15567899999999999999999999997
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-26 Score=239.66 Aligned_cols=266 Identities=21% Similarity=0.376 Sum_probs=226.0
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCC---CEEEEEECCCcEEEEECCC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE---ETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg---~~LaSgs~DGtV~VWDl~t 89 (845)
-|.+.|.++... +..+++|+.||.+++||. .|+..+++.+|.++|.+++|.-.. ..|++++.|.++++|.++.
T Consensus 103 ~hdDWVSsv~~~---~~~IltgsYDg~~riWd~-~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~ 178 (423)
T KOG0313|consen 103 LHDDWVSSVKGA---SKWILTGSYDGTSRIWDL-KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNV 178 (423)
T ss_pred cchhhhhhhccc---CceEEEeecCCeeEEEec-CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecC
Confidence 488999999885 589999999999999996 589999999999999999886433 3599999999999999987
Q ss_pred CcEE----EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC-------------------------CCceEEEEcC
Q psy467 90 PTVQ----RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR-------------------------RKGCIYTYRG 140 (845)
Q Consensus 90 g~~v----~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~-------------------------t~~~l~~~~~ 140 (845)
+... ..-.+|+..|.+++..++|..+++|+.|.+|.+|+.. ++.++.++.+
T Consensus 179 ~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~G 258 (423)
T KOG0313|consen 179 GENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEG 258 (423)
T ss_pred chhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecc
Confidence 7533 3335899999999999999999999999999999932 1236677889
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 141 h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
|..+|.++.|++ ...+++++.|.+|+. ||+.++.. ...+.+...
T Consensus 259 Ht~~Vs~V~w~d-~~v~yS~SwDHTIk~-------------WDletg~~--------------------~~~~~~~ks-- 302 (423)
T KOG0313|consen 259 HTEPVSSVVWSD-ATVIYSVSWDHTIKV-------------WDLETGGL--------------------KSTLTTNKS-- 302 (423)
T ss_pred cccceeeEEEcC-CCceEeecccceEEE-------------EEeecccc--------------------eeeeecCcc--
Confidence 999999999997 678999999999999 99999888 333333222
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
+ .++.++|... +|++|+.
T Consensus 303 ------l---------------------------~~i~~~~~~~-----------------------------Ll~~gss 320 (423)
T KOG0313|consen 303 ------L---------------------------NCISYSPLSK-----------------------------LLASGSS 320 (423)
T ss_pred ------e---------------------------eEeecccccc-----------------------------eeeecCC
Confidence 2 5666666655 9999999
Q ss_pred CCeEEEEECCCC---eEEEEecCCCCCEEEEEEeCCCC-EEEEEeCCC-EEEEEecCCc-eEEEecCCCCCeEEEEEcCC
Q psy467 301 DRTVNFWDLEKF---SLVSTTEKNSSTIRRLTFSEGGE-CLLGGDTEG-LKVYGWEPAR-QYDAQPMGWGKVQDLAVTGT 374 (845)
Q Consensus 301 DG~I~IWDl~s~---~~l~tl~gh~~~VtslafSpdG~-~Lasgs~DG-I~IWDl~tgk-~l~tl~~h~~~VtsVafSdg 374 (845)
|..+++||.+++ -..+++.+|.++|.++.|+|... .|++|+.|+ +++||+.+.+ .+..+.+|.+.|.++.|.++
T Consensus 321 dr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~ 400 (423)
T KOG0313|consen 321 DRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG 400 (423)
T ss_pred CCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC
Confidence 999999999875 35678889999999999999655 578899999 9999999887 89999999999999999988
Q ss_pred ceEEEE
Q psy467 375 QLWFRR 380 (845)
Q Consensus 375 ~lLaaS 380 (845)
.+|+.+
T Consensus 401 ~~IvSG 406 (423)
T KOG0313|consen 401 GLIVSG 406 (423)
T ss_pred ceEEec
Confidence 888877
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=245.36 Aligned_cols=282 Identities=21% Similarity=0.311 Sum_probs=230.2
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec--------CCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS--------GHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~--------~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
|..+.+.|..||| +|++|++|+.||.|.+||..+|+..+.++ -+..+|.|+.|+.|...||+|+.||.|++
T Consensus 211 g~KSh~EcA~FSP-DgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKv 289 (508)
T KOG0275|consen 211 GQKSHVECARFSP-DGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKV 289 (508)
T ss_pred ccccchhheeeCC-CCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEE
Confidence 4567799999999 99999999999999999999888765443 37889999999999999999999999999
Q ss_pred EECCCCcEEEEEc-CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC
Q psy467 85 WNLAVPTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 85 WDl~tg~~v~~l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D 163 (845)
|.+.+|.+++.|. .|...|+|+.|+.|+..+++++.|.++++.-+.+|+++..+++|..-|+...|.+||..+++++.|
T Consensus 290 Wri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsD 369 (508)
T KOG0275|consen 290 WRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSD 369 (508)
T ss_pred EEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCC
Confidence 9999999999996 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCC----CCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP----QYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~----~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
|+|++ |+..+..++.++.+ ..+.++..-|.+..-..+.....
T Consensus 370 gtvkv-------------W~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsn--------------------- 415 (508)
T KOG0275|consen 370 GTVKV-------------WHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSN--------------------- 415 (508)
T ss_pred ccEEE-------------ecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCC---------------------
Confidence 99999 99999999766552 22333333333321111111111
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcc-cccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTC-VPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT 318 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~-~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl 318 (845)
+.+..+-.|+..+.... ....+..-+.+.||.|. ++.+.+.|+.++.|.+.+|++-+++
T Consensus 416 ---------------tv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGe-----wiYcigED~vlYCF~~~sG~LE~tl 475 (508)
T KOG0275|consen 416 ---------------TVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGE-----WIYCIGEDGVLYCFSVLSGKLERTL 475 (508)
T ss_pred ---------------eEEEEeccceEEeeeccCCccCCceEEEEecCCCc-----EEEEEccCcEEEEEEeecCceeeee
Confidence 11111122221111100 01234455777888888 8999999999999999999999999
Q ss_pred cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 319 EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 319 ~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
..|...|..++-+|..+.||+-+.|| +++|.
T Consensus 476 ~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 476 PVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred ecccccccccccCcccchhhhhcccchhhhcC
Confidence 99999999999999999999999999 99994
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=249.53 Aligned_cols=244 Identities=23% Similarity=0.434 Sum_probs=214.1
Q ss_pred cceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
++++|+. +.|.||++.|.|+.|. .+.+++|+.|.+|+|||+++++++.++-+|...|..+.|+ ..++++
T Consensus 218 TikiWD~n~~~c~~~L~GHtGSVLCLqyd---~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvt 292 (499)
T KOG0281|consen 218 TIKIWDKNSLECLKILTGHTGSVLCLQYD---ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVT 292 (499)
T ss_pred ceEEeccccHHHHHhhhcCCCcEEeeecc---ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEE
Confidence 5788984 5688999999999994 5799999999999999999999999999999999999998 469999
Q ss_pred EECCCcEEEEECCCCc---EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 76 GCQSGSIKIWNLAVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~---~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
++.|.++.+||+.... +.+.+.+|...|+.+.|+ .+++++++.|.+|++|++.++++++++.+|...|-|+.+.
T Consensus 293 cSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr- 369 (499)
T KOG0281|consen 293 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR- 369 (499)
T ss_pred ecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehhcc-
Confidence 9999999999998764 234567899999999996 5699999999999999999999999999999999999987
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
|+++++|+.|.+|++ ||+..|.+ +..+.||... |
T Consensus 370 -~rlvVSGSSDntIRl-------------wdi~~G~c--------------------LRvLeGHEeL-------v----- 403 (499)
T KOG0281|consen 370 -DRLVVSGSSDNTIRL-------------WDIECGAC--------------------LRVLEGHEEL-------V----- 403 (499)
T ss_pred -CeEEEecCCCceEEE-------------EeccccHH--------------------HHHHhchHHh-------h-----
Confidence 899999999999999 99999999 7778888877 6
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
.++.|... .+++|+.||+|++||+..+
T Consensus 404 ----------------------RciRFd~k-------------------------------rIVSGaYDGkikvWdl~aa 430 (499)
T KOG0281|consen 404 ----------------------RCIRFDNK-------------------------------RIVSGAYDGKIKVWDLQAA 430 (499)
T ss_pred ----------------------hheeecCc-------------------------------eeeeccccceEEEEecccc
Confidence 67777533 6899999999999999765
Q ss_pred e---------EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc
Q psy467 313 S---------LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 313 ~---------~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk 354 (845)
. |+.++..|.+.|..+.|. ...|++++.|. |-|||+..+-
T Consensus 431 ldpra~~~~~Cl~~lv~hsgRVFrLQFD--~fqIvsssHddtILiWdFl~~~ 480 (499)
T KOG0281|consen 431 LDPRAPASTLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDFLNGP 480 (499)
T ss_pred cCCcccccchHHHhhhhccceeEEEeec--ceEEEeccCCCeEEEEEcCCCC
Confidence 3 455666789999999995 45777777777 9999998764
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-24 Score=245.51 Aligned_cols=264 Identities=20% Similarity=0.291 Sum_probs=205.3
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE-------------EEecCCCCCeEEEEEcC-CCCEEEEEECC
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI-------------MSLSGHSTPVESVQFGN-GEETLSAGCQS 79 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i-------------~~l~~h~~~V~sLafSp-dg~~LaSgs~D 79 (845)
|-..|.....++ ++..+++++.+.....|+...+..+ ..+.+|.+.|.+++|+| ++++|++|+.|
T Consensus 19 ~~~~i~~~~~~~-d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~D 97 (493)
T PTZ00421 19 HFLNVTPSTALW-DCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASED 97 (493)
T ss_pred ceeccccccccC-CCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCC
Confidence 445566666666 6555677777777777775444322 23678999999999999 88999999999
Q ss_pred CcEEEEECCCC-------cEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEe
Q psy467 80 GSIKIWNLAVP-------TVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 80 GtV~VWDl~tg-------~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafS 151 (845)
++|++||+.++ ..+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+..|...|.+++|+
T Consensus 98 gtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~s 177 (493)
T PTZ00421 98 GTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWN 177 (493)
T ss_pred CEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEE
Confidence 99999999765 3567788999999999999985 699999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 152 PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 152 Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
|+|++|++++.|+.|++ ||+++++. +..+.+|... .
T Consensus 178 pdG~lLatgs~Dg~IrI-------------wD~rsg~~--------------------v~tl~~H~~~-------~---- 213 (493)
T PTZ00421 178 LDGSLLCTTSKDKKLNI-------------IDPRDGTI--------------------VSSVEAHASA-------K---- 213 (493)
T ss_pred CCCCEEEEecCCCEEEE-------------EECCCCcE--------------------EEEEecCCCC-------c----
Confidence 99999999999999999 99998877 6666655433 1
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe----CCCeEEEE
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS----ADRTVNFW 307 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs----~DG~I~IW 307 (845)
...+.|.+++. .+++++ .|+.|++|
T Consensus 214 ----------------------~~~~~w~~~~~-----------------------------~ivt~G~s~s~Dr~VklW 242 (493)
T PTZ00421 214 ----------------------SQRCLWAKRKD-----------------------------LIITLGCSKSQQRQIMLW 242 (493)
T ss_pred ----------------------ceEEEEcCCCC-----------------------------eEEEEecCCCCCCeEEEE
Confidence 02344555544 455443 47999999
Q ss_pred ECCCCe-EEEEecCC-CCCEEEEEEeCCCCEEEEEe-CCC-EEEEEecCCceEEEecC-CCCCeEEEEEcC
Q psy467 308 DLEKFS-LVSTTEKN-SSTIRRLTFSEGGECLLGGD-TEG-LKVYGWEPARQYDAQPM-GWGKVQDLAVTG 373 (845)
Q Consensus 308 Dl~s~~-~l~tl~gh-~~~VtslafSpdG~~Lasgs-~DG-I~IWDl~tgk~l~tl~~-h~~~VtsVafSd 373 (845)
|+++.. ++.....+ ...+....|++++.+|++++ .|+ |++||+.+++.+..... +...+.+++|.+
T Consensus 243 Dlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~p 313 (493)
T PTZ00421 243 DTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMP 313 (493)
T ss_pred eCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecc
Confidence 998754 44444433 34566778999999999887 488 99999999987766543 445677777773
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-24 Score=226.47 Aligned_cols=289 Identities=20% Similarity=0.282 Sum_probs=240.0
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC--CCcEE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ--SGSIK 83 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~--DGtV~ 83 (845)
...+.|....+.|+++.|++ +|.++++++.|.+++|||..+++.++++..+...|..++|....+.++.++. |.+|+
T Consensus 5 ~~ak~f~~~~~~i~sl~fs~-~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIr 83 (311)
T KOG1446|consen 5 RPAKVFRETNGKINSLDFSD-DGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIR 83 (311)
T ss_pred ccccccccCCCceeEEEecC-CCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceE
Confidence 34567777888999999999 9999999999999999999999999999999999999999888777777776 88999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D 163 (845)
..++.+.+.++.|.+|...|..++.+|-+..+++++.|++|++||++..++...+..... ..++|+|.|-++|++...
T Consensus 84 yLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--pi~AfDp~GLifA~~~~~ 161 (311)
T KOG1446|consen 84 YLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--PIAAFDPEGLIFALANGS 161 (311)
T ss_pred EEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC--cceeECCCCcEEEEecCC
Confidence 999999999999999999999999999999999999999999999998888777764443 447899999999999888
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
+.|++ ||++....- ...++.-..
T Consensus 162 ~~IkL-------------yD~Rs~dkg------------------PF~tf~i~~-------------------------- 184 (311)
T KOG1446|consen 162 ELIKL-------------YDLRSFDKG------------------PFTTFSITD-------------------------- 184 (311)
T ss_pred CeEEE-------------EEecccCCC------------------CceeEccCC--------------------------
Confidence 89999 998865330 011111100
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSS 323 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~ 323 (845)
+ .....+.+.|||||+ +++.+...+.+++.|.-+|..+.++.++..
T Consensus 185 -----------------~------------~~~ew~~l~FS~dGK-----~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~ 230 (311)
T KOG1446|consen 185 -----------------N------------DEAEWTDLEFSPDGK-----SILLSTNASFIYLLDAFDGTVKSTFSGYPN 230 (311)
T ss_pred -----------------C------------CccceeeeEEcCCCC-----EEEEEeCCCcEEEEEccCCcEeeeEeeccC
Confidence 0 011233445555555 888888999999999999999999987643
Q ss_pred C---EEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC-CCCCeEEEEEcCCceEEEE----EEEEeeCC
Q psy467 324 T---IRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM-GWGKVQDLAVTGTQLWFRR----VGTWSHQD 388 (845)
Q Consensus 324 ~---VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~-h~~~VtsVafSdg~lLaaS----VsiW~~d~ 388 (845)
. -...+|+||++++++|+.|| |.+|++++|..+..+.+ +.+.+.++.|++...++++ +-.|..+.
T Consensus 231 ~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s~l~fw~p~~ 304 (311)
T KOG1446|consen 231 AGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASSNLVFWLPDE 304 (311)
T ss_pred CCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCceEEEEeccc
Confidence 3 26788999999999999999 99999999999999988 7899999999977766666 78887653
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-25 Score=271.21 Aligned_cols=245 Identities=20% Similarity=0.307 Sum_probs=202.7
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCcE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~tg~~ 92 (845)
+...|.+++|++..+.+||+++.||+|++||+.+++.+..+.+|...|++++|+| ++.+|++|+.||+|++||+.++..
T Consensus 531 ~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~ 610 (793)
T PLN00181 531 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVS 610 (793)
T ss_pred ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcE
Confidence 3467999999986788999999999999999999999999999999999999997 789999999999999999999998
Q ss_pred EEEEcCCCCCeEEEEEc-cCCCEEEEEECCCeEEEEECCCCc-eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEee
Q psy467 93 QRTLNGHKSSITSVDFH-PYGDYLCSGSLDSFIKLWDLRRKG-CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170 (845)
Q Consensus 93 v~~l~~h~~~V~~lafs-pdg~~Lasgs~DG~I~IWDl~t~~-~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~ 170 (845)
+..+..+ ..+.++.|+ +++.+|++|+.||.|++||+++.. .+..+.+|...|.++.|. ++.+|++++.|+.|++
T Consensus 611 ~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~iki-- 686 (793)
T PLN00181 611 IGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKL-- 686 (793)
T ss_pred EEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEE--
Confidence 8888754 679999995 578999999999999999998765 567788899999999997 6889999999999999
Q ss_pred eeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhcc
Q psy467 171 SFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250 (845)
Q Consensus 171 ~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~ 250 (845)
||+..+.. ..+...+..+.+|... +
T Consensus 687 -----------Wd~~~~~~--------------~~~~~~l~~~~gh~~~-------i----------------------- 711 (793)
T PLN00181 687 -----------WDLSMSIS--------------GINETPLHSFMGHTNV-------K----------------------- 711 (793)
T ss_pred -----------EeCCCCcc--------------ccCCcceEEEcCCCCC-------e-----------------------
Confidence 99875321 0011124445555443 3
Q ss_pred CCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe------------
Q psy467 251 NPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT------------ 318 (845)
Q Consensus 251 ~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl------------ 318 (845)
..+.|++++. +|++|+.|+.|++|+.....++..+
T Consensus 712 ----~~v~~s~~~~-----------------------------~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~ 758 (793)
T PLN00181 712 ----NFVGLSVSDG-----------------------------YIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLE 758 (793)
T ss_pred ----eEEEEcCCCC-----------------------------EEEEEeCCCEEEEEECCCCCceEEEecccCCcccccc
Confidence 4455555555 9999999999999998765443222
Q ss_pred -cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 319 -EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 319 -~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
..|...|.+++|++++..|++|+.+| |+||++
T Consensus 759 ~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 759 VDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred cCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 23456799999999999999999999 999986
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-26 Score=266.64 Aligned_cols=293 Identities=19% Similarity=0.306 Sum_probs=235.8
Q ss_pred cCCCcEEEEEEecCCCCEEEEEe--CCCeEEEEECCC------------CeeEEEecCCCCCeEEEEEcCCCCEEEEEEC
Q psy467 13 AHGASVNCLALGKKSGQVLATGG--DDKKVNLWALGK------------SNCIMSLSGHSTPVESVQFGNGEETLSAGCQ 78 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs--~DG~I~IWdl~t------------~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~ 78 (845)
.++..|.+++.+| +|..+|||+ .||.++||+.+. .+.+.+...|.+.|+|+.|++||.+||+|++
T Consensus 11 H~~~~IfSIdv~p-dg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD 89 (942)
T KOG0973|consen 11 HNEKSIFSIDVHP-DGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD 89 (942)
T ss_pred cCCeeEEEEEecC-CceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC
Confidence 3455899999999 999999999 899999998631 2345566789999999999999999999999
Q ss_pred CCcEEEEECCC------------------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC
Q psy467 79 SGSIKIWNLAV------------------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 79 DGtV~VWDl~t------------------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~ 140 (845)
|+.|.||+... .+.+..+.+|...|..++|+|++.+|++++.|++|.+|+..+.+.+..+++
T Consensus 90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~ 169 (942)
T KOG0973|consen 90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRG 169 (942)
T ss_pred cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeec
Confidence 99999998872 136677889999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--------CCCCCcceeecCCCCeEEE
Q psy467 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--------PPQYTSSVPFSHNTSLRKS 212 (845)
Q Consensus 141 h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--------~~~~i~svs~spdg~~l~~ 212 (845)
|.+.|..+.|+|-|+|||+-+.|++|++ |++.+......+ .......+.|+|||.++++
T Consensus 170 H~s~VKGvs~DP~Gky~ASqsdDrtikv-------------wrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las 236 (942)
T KOG0973|consen 170 HQSLVKGVSWDPIGKYFASQSDDRTLKV-------------WRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLAS 236 (942)
T ss_pred ccccccceEECCccCeeeeecCCceEEE-------------EEcccceeeEeeccchhhCCCcceeeecccCCCcCeecc
Confidence 9999999999999999999999999999 886654332222 1455678999999999987
Q ss_pred EecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC------
Q psy467 213 FTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ------ 286 (845)
Q Consensus 213 ~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd------ 286 (845)
..+-.++ . .++++-..+.|......+.|..++.+++|+|.
T Consensus 237 ~nA~n~~-------~---------------------------~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~ 282 (942)
T KOG0973|consen 237 PNAVNGG-------K---------------------------STIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNN 282 (942)
T ss_pred hhhccCC-------c---------------------------ceeEEEecCCceeeeeeecCCCceEEEEeChHHhcccc
Confidence 6554443 2 33333333444445555666667777777762
Q ss_pred --CCc----ccceEEEEEeCCCeEEEEECCCCeEEEEecC-CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 287 --SPM----LCFILTTSSSADRTVNFWDLEKFSLVSTTEK-NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 287 --g~~----~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g-h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
|.. ..|..+|+|+.|++|.||.....+++..... ....|.+++|+|||..|++++.|| |.++.++..
T Consensus 283 ~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 283 KNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred ccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence 111 0123789999999999999987777655442 356899999999999999999999 999998753
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-25 Score=225.57 Aligned_cols=236 Identities=22% Similarity=0.396 Sum_probs=199.7
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC--CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK--SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t--~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg 90 (845)
+|+..|.+++|+| .|++||+|+.|.++.||.-.. .+++..+.||...|.|++|+++|++||+++.|..|.||.+..+
T Consensus 59 ~hkrsVRsvAwsp-~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~ded 137 (312)
T KOG0645|consen 59 GHKRSVRSVAWSP-HGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDED 137 (312)
T ss_pred cchheeeeeeecC-CCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCC
Confidence 7999999999999 999999999999999998754 3678999999999999999999999999999999999999754
Q ss_pred ---cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC---CCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 91 ---TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR---RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 91 ---~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~---t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
++...++.|...|..+.|+|...+|++++.|.+|++|+-. ...++.++.+|...|++++|++.|..|++++.|+
T Consensus 138 dEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~ 217 (312)
T KOG0645|consen 138 DEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDG 217 (312)
T ss_pred CcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCc
Confidence 5778889999999999999999999999999999999875 3468999999999999999999999999999999
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
+++| |-..+.-. ..|... +
T Consensus 218 tv~I-------------w~~~~~~~------------------------~~~sr~-------~----------------- 236 (312)
T KOG0645|consen 218 TVSI-------------WRLYTDLS------------------------GMHSRA-------L----------------- 236 (312)
T ss_pred ceEe-------------eeeccCcc------------------------hhcccc-------e-----------------
Confidence 9999 76542211 011122 3
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC------eEEE-E
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF------SLVS-T 317 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~------~~l~-t 317 (845)
+.+.|. ++ .+++++.|+.|++|.-... +++. .
T Consensus 237 ----------Y~v~W~-~~------------------------------~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~ 275 (312)
T KOG0645|consen 237 ----------YDVPWD-NG------------------------------VIASGGGDDAIRLFKESDSPDEPSWNLLAKK 275 (312)
T ss_pred ----------Eeeeec-cc------------------------------ceEeccCCCEEEEEEecCCCCCchHHHHHhh
Confidence 445555 32 6999999999999976542 1121 2
Q ss_pred ecCCCCCEEEEEEeCC-CCEEEEEeCCC-EEEEEec
Q psy467 318 TEKNSSTIRRLTFSEG-GECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 318 l~gh~~~VtslafSpd-G~~Lasgs~DG-I~IWDl~ 351 (845)
-..|...|+++.|+|. ...|++|++|| |++|.+.
T Consensus 276 ~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 276 EGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred hcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 2358889999999994 77899999999 9999875
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=247.95 Aligned_cols=256 Identities=19% Similarity=0.336 Sum_probs=230.8
Q ss_pred ceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 3 AKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 3 irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
+.+|+ ++.|.-..-+|.+..|-+ ..+++++|++|..|+||+..+++.++.+..|.+.|+|++.+|...+++++
T Consensus 37 V~IWnyetqtmVksfeV~~~PvRa~kfia-RknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLts 115 (794)
T KOG0276|consen 37 VQIWNYETQTMVKSFEVSEVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTS 115 (794)
T ss_pred eEEEecccceeeeeeeecccchhhheeee-ccceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEec
Confidence 45676 456777888999999998 88999999999999999999999999999999999999999999999999
Q ss_pred ECCCcEEEEECCCC-cEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC-
Q psy467 77 CQSGSIKIWNLAVP-TVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD- 153 (845)
Q Consensus 77 s~DGtV~VWDl~tg-~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd- 153 (845)
++|-+|++||++.+ .+.+++.+|..-|.+++|+| |.+.|++++-|++|++|.+.+..+..++.+|...|+|+++-+.
T Consensus 116 SDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~g 195 (794)
T KOG0276|consen 116 SDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGG 195 (794)
T ss_pred CCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCC
Confidence 99999999999875 77889999999999999999 5689999999999999999999999999999999999999884
Q ss_pred -CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 154 -GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 154 -g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
..+|++|+.|.++++ ||..+..+ +.++.+|... |
T Consensus 196 dkpylIsgaDD~tiKv-------------WDyQtk~C--------------------V~TLeGHt~N-------v----- 230 (794)
T KOG0276|consen 196 DKPYLISGADDLTIKV-------------WDYQTKSC--------------------VQTLEGHTNN-------V----- 230 (794)
T ss_pred CcceEEecCCCceEEE-------------eecchHHH--------------------HHHhhccccc-------c-----
Confidence 469999999999999 99999999 8888999888 7
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
..+.|+|.-. ++++|+.||+++||+..+.
T Consensus 231 ----------------------s~v~fhp~lp-----------------------------iiisgsEDGTvriWhs~Ty 259 (794)
T KOG0276|consen 231 ----------------------SFVFFHPELP-----------------------------IIISGSEDGTVRIWNSKTY 259 (794)
T ss_pred ----------------------eEEEecCCCc-----------------------------EEEEecCCccEEEecCcce
Confidence 7788888777 9999999999999999999
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCce
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQ 355 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~ 355 (845)
++..++.-.-..|.|++-.+.+..+++|.++|..+..+-.+.+
T Consensus 260 ~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~lgreeP 302 (794)
T KOG0276|consen 260 KLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKLGREEP 302 (794)
T ss_pred ehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEEEccCCCC
Confidence 8888888767889999999988899999998844455544433
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-25 Score=229.24 Aligned_cols=249 Identities=24% Similarity=0.410 Sum_probs=216.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCC-CEEEEEECCCcEEEEEC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE-ETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg-~~LaSgs~DGtV~VWDl 87 (845)
..+++|+++|..+.|.+ +++.+++++.|.+++.||.++|+.++.+++|...|+++.-+.-| .++.+++.|+++++||+
T Consensus 84 ~~lkgHsgAVM~l~~~~-d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~ 162 (338)
T KOG0265|consen 84 WVLKGHSGAVMELHGMR-DGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDI 162 (338)
T ss_pred eeeccccceeEeeeecc-CCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEee
Confidence 46889999999999999 99999999999999999999999999999999999999855444 46678889999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
++...++++. .+.+++++.|..++..+.+|+-|+.|++||++.+...+.+.+|...|+.+..+++|.++.+-+.|.+++
T Consensus 163 R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvr 241 (338)
T KOG0265|consen 163 RKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVR 241 (338)
T ss_pred cccchhhccc-cceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEE
Confidence 9988888886 567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ ||++.... ..+.+..+.++....... .
T Consensus 242 v-------------wd~rp~~p----------------~~R~v~if~g~~hnfekn---l-------------------- 269 (338)
T KOG0265|consen 242 V-------------WDVRPFAP----------------SQRCVKIFQGHIHNFEKN---L-------------------- 269 (338)
T ss_pred E-------------EEecccCC----------------CCceEEEeecchhhhhhh---c--------------------
Confidence 9 99985433 333355565554330000 0
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts 327 (845)
....|+|++. .+.+|+.|..+++||......+..+.||.+.|++
T Consensus 270 -------L~cswsp~~~-----------------------------~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~ 313 (338)
T KOG0265|consen 270 -------LKCSWSPNGT-----------------------------KITAGSADRFVYVWDTTSRRILYKLPGHYGSVNE 313 (338)
T ss_pred -------ceeeccCCCC-----------------------------ccccccccceEEEeecccccEEEEcCCcceeEEE
Confidence 3344555555 8999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEeCCC-EEE
Q psy467 328 LTFSEGGECLLGGDTEG-LKV 347 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~I 347 (845)
++|+|...+|.+++.|. |.+
T Consensus 314 ~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 314 VDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred eeecCCCcEEEEeccCceeEe
Confidence 99999999999999998 665
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-26 Score=230.34 Aligned_cols=289 Identities=18% Similarity=0.272 Sum_probs=249.2
Q ss_pred EEeccCCCcEEEEEEec--CCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 9 EDFMAHGASVNCLALGK--KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp--~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
..-.||+.+|..++||| ++|-+|++++.||.-.+-+-++|.-+.++.+|.+.|++...+.+...-|+++.|-+.++||
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~ 87 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWD 87 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhh
Confidence 35679999999999987 4788999999999999999999999999999999999999999988899999999999999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
.-+|..+.+|. |+.-|..++|+.|.++|++|+.+..+++||++.. .+...+.+|.+.|..+.|....+.++++..|++
T Consensus 88 a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~t 166 (334)
T KOG0278|consen 88 AVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKT 166 (334)
T ss_pred hhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCc
Confidence 99999999998 8889999999999999999999999999999754 456788899999999999998899999999999
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
|++ ||.+++..++++. +..+.++-++++|+++....+..-
T Consensus 167 VRL-------------WD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV-------------------------- 207 (334)
T KOG0278|consen 167 VRL-------------WDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSV-------------------------- 207 (334)
T ss_pred eEE-------------EEeccCcEEEEEecCCCCcceeeccCCCEEEEecCcee--------------------------
Confidence 999 9999999987766 778899999999998766443221
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe-cCCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT-EKNSS 323 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl-~gh~~ 323 (845)
.-|+++.. ....-......|.+..++|+.. .+++|+.|..++.||..+++.+..+ .+|.+
T Consensus 208 ------------~Fwdaksf--~~lKs~k~P~nV~SASL~P~k~-----~fVaGged~~~~kfDy~TgeEi~~~nkgh~g 268 (334)
T KOG0278|consen 208 ------------KFWDAKSF--GLLKSYKMPCNVESASLHPKKE-----FFVAGGEDFKVYKFDYNTGEEIGSYNKGHFG 268 (334)
T ss_pred ------------EEeccccc--cceeeccCccccccccccCCCc-----eEEecCcceEEEEEeccCCceeeecccCCCC
Confidence 11222221 0111122345677888888887 8999999999999999999998886 89999
Q ss_pred CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceE
Q psy467 324 TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQY 356 (845)
Q Consensus 324 ~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l 356 (845)
+|.|+.|+|||..-|+|+.|| |+||....++..
T Consensus 269 pVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 269 PVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred ceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 999999999999999999999 999998876543
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=220.70 Aligned_cols=282 Identities=16% Similarity=0.245 Sum_probs=235.6
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t 89 (845)
-++||..+++.+.++. +|++|++++.|.+..||-..+|+.+.++.+|++.|+|+..+.+.+++++|+.|.++++||+++
T Consensus 5 ~l~GHERplTqiKyN~-eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~t 83 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNR-EGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVET 83 (327)
T ss_pred ccccCccccceEEecC-CCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCC
Confidence 4789999999999999 999999999999999999989999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEEC-----CCeEEEEECC-------CCceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSL-----DSFIKLWDLR-------RKGCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs~-----DG~I~IWDl~-------t~~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
|+++..++ ...+|..+.|+.+|++++.... .+.|.++|++ ..++...+..+...++.+-|.|-+.+|
T Consensus 84 Gk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~i 162 (327)
T KOG0643|consen 84 GKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETI 162 (327)
T ss_pred CcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEE
Confidence 99999998 6678999999999998877653 4679999997 445677787788999999999999999
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
++|.+||.|.. ||++++..+ +.....|...
T Consensus 163 i~Ghe~G~is~-------------~da~~g~~~-------------------v~s~~~h~~~------------------ 192 (327)
T KOG0643|consen 163 IAGHEDGSISI-------------YDARTGKEL-------------------VDSDEEHSSK------------------ 192 (327)
T ss_pred EEecCCCcEEE-------------EEcccCcee-------------------eechhhhccc------------------
Confidence 99999999999 999998761 2222223222
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t 317 (845)
|+.+++++|.. ++++++.|.+-++||..+.+++++
T Consensus 193 ----------------------------------------Ind~q~s~d~T-----~FiT~s~Dttakl~D~~tl~v~Kt 227 (327)
T KOG0643|consen 193 ----------------------------------------INDLQFSRDRT-----YFITGSKDTTAKLVDVRTLEVLKT 227 (327)
T ss_pred ----------------------------------------cccccccCCcc-----eEEecccCccceeeeccceeeEEE
Confidence 34444445544 999999999999999999999999
Q ss_pred ecCCCCCEEEEEEeCCCCEEEEEeCCC---E------------EEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-
Q psy467 318 TEKNSSTIRRLTFSEGGECLLGGDTEG---L------------KVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR- 380 (845)
Q Consensus 318 l~gh~~~VtslafSpdG~~Lasgs~DG---I------------~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS- 380 (845)
+.. ..+|++.+++|...+++.|+.-. | ++|++-..+.+..+++|-++|++|+|+ +|+..+.+
T Consensus 228 y~t-e~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGG 306 (327)
T KOG0643|consen 228 YTT-ERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGG 306 (327)
T ss_pred eee-cccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCC
Confidence 985 67999999999877777665432 2 233333335667889999999999999 88888877
Q ss_pred ----EEEEeeCCC
Q psy467 381 ----VGTWSHQDS 389 (845)
Q Consensus 381 ----VsiW~~d~~ 389 (845)
|.+...+..
T Consensus 307 EDG~VR~h~Fd~~ 319 (327)
T KOG0643|consen 307 EDGYVRLHHFDSN 319 (327)
T ss_pred CCceEEEEEeccc
Confidence 776655433
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-23 Score=240.17 Aligned_cols=250 Identities=20% Similarity=0.366 Sum_probs=193.8
Q ss_pred EeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCC-CCEEEEEECCCcEEEEECCCCc--------EEEEEcCCCCCeE
Q psy467 34 GGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG-EETLSAGCQSGSIKIWNLAVPT--------VQRTLNGHKSSIT 104 (845)
Q Consensus 34 gs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpd-g~~LaSgs~DGtV~VWDl~tg~--------~v~~l~~h~~~V~ 104 (845)
|+.++.|++|+......+..+.+|...|.+++|+|+ +.+|++|+.||+|+|||+.++. .+..+.+|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 556789999998887888899999999999999996 7899999999999999997642 3456788999999
Q ss_pred EEEEccCCCE-EEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEE
Q psy467 105 SVDFHPYGDY-LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVD 183 (845)
Q Consensus 105 ~lafspdg~~-Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWD 183 (845)
+++|+|++.. |++++.|++|++||+++++.+..+. +...|.+++|+|+|.+|++++.|+.|++ ||
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrI-------------wD 195 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHI-------------ID 195 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEE-------------EE
Confidence 9999999875 5789999999999999998877776 5678999999999999999999999999 99
Q ss_pred CCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCC
Q psy467 184 LSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHR 263 (845)
Q Consensus 184 l~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg 263 (845)
++++.. +..+.+|.... ....+ ....|++++
T Consensus 196 ~Rsg~~--------------------i~tl~gH~g~~--~s~~v---------------------------~~~~fs~d~ 226 (568)
T PTZ00420 196 PRKQEI--------------------ASSFHIHDGGK--NTKNI---------------------------WIDGLGGDD 226 (568)
T ss_pred CCCCcE--------------------EEEEecccCCc--eeEEE---------------------------EeeeEcCCC
Confidence 998887 66777776540 00000 112233444
Q ss_pred CcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC----eEEEEECCC-CeEEEEec--CCCCCEEEEEEeCCCCE
Q psy467 264 SLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR----TVNFWDLEK-FSLVSTTE--KNSSTIRRLTFSEGGEC 336 (845)
Q Consensus 264 ~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG----~I~IWDl~s-~~~l~tl~--gh~~~VtslafSpdG~~ 336 (845)
. ++++++.|+ .|+|||+++ .+++..+. .+.+.+......++|.+
T Consensus 227 ~-----------------------------~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l 277 (568)
T PTZ00420 227 N-----------------------------YILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLI 277 (568)
T ss_pred C-----------------------------EEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCE
Confidence 4 788777664 799999985 55665544 33344444444566999
Q ss_pred EEEEeCCC-EEEEEecCCceEEEec--CCCCCeEEEEEcCCce
Q psy467 337 LLGGDTEG-LKVYGWEPARQYDAQP--MGWGKVQDLAVTGTQL 376 (845)
Q Consensus 337 Lasgs~DG-I~IWDl~tgk~l~tl~--~h~~~VtsVafSdg~l 376 (845)
+++|+.|+ |++|++..+.. ..+. .+..++.+++|.+.+.
T Consensus 278 ~lsGkGD~tIr~~e~~~~~~-~~l~~~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 278 YLIGKGDGNCRYYQHSLGSI-RKVNEYKSCSPFRSFGFLPKQI 319 (568)
T ss_pred EEEEECCCeEEEEEccCCcE-EeecccccCCCccceEEccccc
Confidence 99999999 99999987743 2222 2557788899985444
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-26 Score=247.84 Aligned_cols=280 Identities=19% Similarity=0.300 Sum_probs=224.2
Q ss_pred eeEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECCC-CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEE
Q psy467 49 NCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLAV-PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126 (845)
Q Consensus 49 ~~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~t-g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~I 126 (845)
+.++++.+|+..|.++.|.| .+.+|++++.|+.|+||++.. +++++++.+|..+|.+++|+++|..|++++.|+.|++
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl 284 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL 284 (503)
T ss_pred hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence 45778899999999999999 889999999999999999987 8999999999999999999999999999999999999
Q ss_pred EECCCCceEEEEcCCCCCeEEEEEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC--CCCCcceee
Q psy467 127 WDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP--PQYTSSVPF 203 (845)
Q Consensus 127 WDl~t~~~l~~~~~h~~~V~sLafSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~--~~~i~svs~ 203 (845)
||+++|+++..+. ....+.|+.|+||+ +.+++|+.|+.|+. ||+++++.++... -..+..+.|
T Consensus 285 wDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~-------------wDiRs~kvvqeYd~hLg~i~~i~F 350 (503)
T KOG0282|consen 285 WDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQ-------------WDIRSGKVVQEYDRHLGAILDITF 350 (503)
T ss_pred eccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEE-------------EeccchHHHHHHHhhhhheeeeEE
Confidence 9999999999997 45678999999988 88999999999999 9999999765432 566777888
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
-++|+...+-.... .+.||....... .............+++.
T Consensus 351 ~~~g~rFissSDdk------s~riWe~~~~v~-------------------------------ik~i~~~~~hsmP~~~~ 393 (503)
T KOG0282|consen 351 VDEGRRFISSSDDK------SVRIWENRIPVP-------------------------------IKNIADPEMHTMPCLTL 393 (503)
T ss_pred ccCCceEeeeccCc------cEEEEEcCCCcc-------------------------------chhhcchhhccCcceec
Confidence 88877554422211 222322211110 00111112234457778
Q ss_pred cCCCCcccceEEEEEeCCCeEEEEECCCC---eEEEEecCC--CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEE
Q psy467 284 LPQSPMLCFILTTSSSADRTVNFWDLEKF---SLVSTTEKN--SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYD 357 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~DG~I~IWDl~s~---~~l~tl~gh--~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~ 357 (845)
+|+++ ++++-+.|+.|.+|.+... .....+.+| .+--..+.|||||++|++|+.|| +.+||+.+.+.+.
T Consensus 394 ~P~~~-----~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~ 468 (503)
T KOG0282|consen 394 HPNGK-----WFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVS 468 (503)
T ss_pred CCCCC-----eehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhh
Confidence 88888 8999999999999997543 234456777 35567899999999999999999 9999999999999
Q ss_pred EecCCCCCeEEEEEc---CCceEEEE----EEEE
Q psy467 358 AQPMGWGKVQDLAVT---GTQLWFRR----VGTW 384 (845)
Q Consensus 358 tl~~h~~~VtsVafS---dg~lLaaS----VsiW 384 (845)
.++.|.+.+..+.|+ .+++++++ |.+|
T Consensus 469 ~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiw 502 (503)
T KOG0282|consen 469 KLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIW 502 (503)
T ss_pred ccccCCcceEEEEecCCCcceeEecccCceeEec
Confidence 999999999999999 34444444 7777
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-24 Score=234.11 Aligned_cols=269 Identities=24% Similarity=0.328 Sum_probs=224.2
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~ 92 (845)
...+.|.+++|+|....-+|+++.- .+.||+..+....+++......|.++.|..||.+||+|...|.|+|+|..+...
T Consensus 24 ke~~~vssl~fsp~~P~d~aVt~S~-rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~i 102 (487)
T KOG0310|consen 24 KEHNSVSSLCFSPKHPYDFAVTSSV-RVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVI 102 (487)
T ss_pred cccCcceeEecCCCCCCceEEeccc-EEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHH
Confidence 3446899999999666667766543 799999988888888888889999999999999999999999999999877667
Q ss_pred EEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC-CCEEEEEeCCCcEEEee
Q psy467 93 QRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD-GQWIASGGEDGVVRIGA 170 (845)
Q Consensus 93 v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd-g~~Lasgs~DG~I~I~~ 170 (845)
++.+.+|..+|..+.|+|++ ..|++|+.|+.+++||+.+......+.+|...|.|.+|+|. +..+++|+.||.|++
T Consensus 103 LR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl-- 180 (487)
T KOG0310|consen 103 LRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRL-- 180 (487)
T ss_pred HHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEE--
Confidence 78889999999999999965 56778888999999999998877788999999999999994 568999999999999
Q ss_pred eeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhcc
Q psy467 171 SFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250 (845)
Q Consensus 171 ~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~ 250 (845)
||++.... .+..+. |..+ |
T Consensus 181 -----------~DtR~~~~-------------------~v~eln-hg~p-------V----------------------- 199 (487)
T KOG0310|consen 181 -----------WDTRSLTS-------------------RVVELN-HGCP-------V----------------------- 199 (487)
T ss_pred -----------EEeccCCc-------------------eeEEec-CCCc-------e-----------------------
Confidence 99986532 033332 3333 3
Q ss_pred CCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCCEEEEE
Q psy467 251 NPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSSTIRRLT 329 (845)
Q Consensus 251 ~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~Vtsla 329 (845)
..+.+-|.|. ++++++ .+.|++||+.+| +.+.....|...|+|++
T Consensus 200 ----e~vl~lpsgs-----------------------------~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~ 245 (487)
T KOG0310|consen 200 ----ESVLALPSGS-----------------------------LIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLR 245 (487)
T ss_pred ----eeEEEcCCCC-----------------------------EEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEE
Confidence 5555666655 788876 458999999865 45555555999999999
Q ss_pred EeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 330 FSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 330 fSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
+..+++.|++|+-|+ +++||+.+-+.+..+. ..++|-+++.+ +++.++++
T Consensus 246 l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viG 297 (487)
T KOG0310|consen 246 LASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIG 297 (487)
T ss_pred eecCCceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEe
Confidence 999999999999999 9999988888777765 56899999999 88999988
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-24 Score=250.68 Aligned_cols=268 Identities=26% Similarity=0.461 Sum_probs=241.3
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE-ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS-LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~-l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~ 92 (845)
|...|.|..|. ..++++++.+++|++|+..++..+.. +.+|.+.|+++++..-+.+|++|+.|.++++||..+|.+
T Consensus 207 ~~~~~~~~q~~---~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C 283 (537)
T KOG0274|consen 207 DDHVVLCLQLH---DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGEC 283 (537)
T ss_pred Ccchhhhheee---cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcE
Confidence 66789999996 47899999999999999999999888 999999999999988789999999999999999999999
Q ss_pred EEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeee
Q psy467 93 QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172 (845)
Q Consensus 93 v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~ 172 (845)
...+.+|...|.++... ...+++|+.|.+|++|++.++.++..+.+|..+|.++..+ +.++++|+.|++|.+
T Consensus 284 ~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~V---- 355 (537)
T KOG0274|consen 284 THSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKV---- 355 (537)
T ss_pred EEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEE----
Confidence 99999999999998875 4578889999999999999999999999999999999998 889999999999999
Q ss_pred ccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCC
Q psy467 173 HLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANP 252 (845)
Q Consensus 173 ~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~ 252 (845)
||..++++ +..+.+|... |
T Consensus 356 ---------W~~~~~~c--------------------l~sl~gH~~~-------V------------------------- 374 (537)
T KOG0274|consen 356 ---------WDPRTGKC--------------------LKSLSGHTGR-------V------------------------- 374 (537)
T ss_pred ---------EEhhhcee--------------------eeeecCCcce-------E-------------------------
Confidence 99999999 8899998887 7
Q ss_pred CceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCCEEEEEEe
Q psy467 253 CDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSSTIRRLTFS 331 (845)
Q Consensus 253 ~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~VtslafS 331 (845)
.++.+... . .+++|+.|+.|++||+++. +++.++.+|..-|..+.+
T Consensus 375 --~sl~~~~~-~-----------------------------~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~- 421 (537)
T KOG0274|consen 375 --YSLIVDSE-N-----------------------------RLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL- 421 (537)
T ss_pred --EEEEecCc-c-----------------------------eEEeeeeccceEeecCCchhhhhhhhcCCccccccccc-
Confidence 66655553 4 7999999999999999999 999999999988866655
Q ss_pred CCCCEEEEEeCCC-EEEEEecCCceEEEecC-CCCCeEEEEEcCCceEEEE----EEEEeeC
Q psy467 332 EGGECLLGGDTEG-LKVYGWEPARQYDAQPM-GWGKVQDLAVTGTQLWFRR----VGTWSHQ 387 (845)
Q Consensus 332 pdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~-h~~~VtsVafSdg~lLaaS----VsiW~~d 387 (845)
.+++|++++.|+ |++||..++++++++.+ |.+.|+.+++.+...++++ +.+|.+.
T Consensus 422 -~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~~~~il~s~~~~~~~l~dl~ 482 (537)
T KOG0274|consen 422 -RDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALGKEEILCSSDDGSVKLWDLR 482 (537)
T ss_pred -ccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecCcceEEEEecCCeeEEEecc
Confidence 567999999999 99999999999999998 7789999988856666666 9999654
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=249.86 Aligned_cols=257 Identities=24% Similarity=0.418 Sum_probs=224.1
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t 89 (845)
.+.||.+.|+++++.. .++++++|+.|.++++||..++++...+.+|.+.|.++...+ ..+++|+.|.+|++|++.+
T Consensus 244 ~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n 320 (537)
T KOG0274|consen 244 RLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTN 320 (537)
T ss_pred eccCCCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC--ceEeeccCCceEEEEeccC
Confidence 3999999999999976 789999999999999999999999999999999999998764 5788899999999999999
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~ 169 (845)
+..+..+.+|.++|.++..+ +.++++|+.|++|++||+.+++++.++.+|...|.++.+.+. ..+++|+.|+.|++
T Consensus 321 ~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~Ikv- 396 (537)
T KOG0274|consen 321 GACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKV- 396 (537)
T ss_pred cceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEe-
Confidence 99999999999999999998 789999999999999999999999999999999999988754 89999999999999
Q ss_pred eeeccCCceeEEEECCCC-ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 170 ASFHLTNTSIHVVDLSLV-HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg-~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||+++. ++ +.++.+|... +
T Consensus 397 ------------Wdl~~~~~c--------------------~~tl~~h~~~-------v--------------------- 416 (537)
T KOG0274|consen 397 ------------WDLRTKRKC--------------------IHTLQGHTSL-------V--------------------- 416 (537)
T ss_pred ------------ecCCchhhh--------------------hhhhcCCccc-------c---------------------
Confidence 999998 77 6666666654 2
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC-CCCCEEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK-NSSTIRR 327 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g-h~~~Vts 327 (845)
.. +...+. +|++++.|+.|++||..++++++++.+ |.+.|++
T Consensus 417 ------~~--l~~~~~-----------------------------~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~ 459 (537)
T KOG0274|consen 417 ------SS--LLLRDN-----------------------------FLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSA 459 (537)
T ss_pred ------cc--cccccc-----------------------------eeEeccccccEEEeecccCceeeeeccCCcccEEE
Confidence 11 122233 899999999999999999999999998 6788999
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCC-CCCeEEEEEc
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMG-WGKVQDLAVT 372 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h-~~~VtsVafS 372 (845)
+++. ...+++++.++ +++||+.++++...+-.+ ......+++.
T Consensus 460 l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l~~~~~~~~~~~~~~ 504 (537)
T KOG0274|consen 460 LALG--KEEILCSSDDGSVKLWDLRSGTLIRTLLSTDLGATWGVAPS 504 (537)
T ss_pred eecC--cceEEEEecCCeeEEEecccCchhhhhhhcccccccccccC
Confidence 9887 45788888999 999999999988766333 3444455554
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-23 Score=241.08 Aligned_cols=230 Identities=16% Similarity=0.266 Sum_probs=185.9
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC-------eeEEEecCCCCCeEEEEEcCCC-CEEEEEECCCc
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-------NCIMSLSGHSTPVESVQFGNGE-ETLSAGCQSGS 81 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~-------~~i~~l~~h~~~V~sLafSpdg-~~LaSgs~DGt 81 (845)
.+.+|.+.|++++|+|.++++||+|+.|++|++||+.++ ..+..+.+|...|.+++|+|++ ++|++|+.|++
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 478999999999999967789999999999999999764 3567889999999999999975 69999999999
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCC-eEEEEEecCCCEEEEE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS-INSIRFSPDGQWIASG 160 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~-V~sLafSPdg~~Lasg 160 (845)
|+|||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++.+..+.+|.+. +..+.|.+++..++++
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~ 229 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITL 229 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEE
Confidence 999999999999999999999999999999999999999999999999999999999888764 4567899988887766
Q ss_pred e----CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 161 G----EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 161 s----~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+ .|+.|++ ||+++.... +.....+... .+
T Consensus 230 G~s~s~Dr~Vkl-------------WDlr~~~~p-------------------~~~~~~d~~~------~~--------- 262 (493)
T PTZ00421 230 GCSKSQQRQIML-------------WDTRKMASP-------------------YSTVDLDQSS------AL--------- 262 (493)
T ss_pred ecCCCCCCeEEE-------------EeCCCCCCc-------------------eeEeccCCCC------ce---------
Confidence 5 4788999 999865430 1111111110 01
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCeEE
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFSLV 315 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~~l 315 (845)
....|++++. +|++|+ .|+.|++||+.+++++
T Consensus 263 ------------------~~~~~d~d~~-----------------------------~L~lggkgDg~Iriwdl~~~~~~ 295 (493)
T PTZ00421 263 ------------------FIPFFDEDTN-----------------------------LLYIGSKGEGNIRCFELMNERLT 295 (493)
T ss_pred ------------------EEEEEcCCCC-----------------------------EEEEEEeCCCeEEEEEeeCCceE
Confidence 2334555554 777776 5999999999999887
Q ss_pred EEecC-CCCCEEEEEEeCC
Q psy467 316 STTEK-NSSTIRRLTFSEG 333 (845)
Q Consensus 316 ~tl~g-h~~~VtslafSpd 333 (845)
..... +..++..++|.|.
T Consensus 296 ~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 296 FCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred EEeeccCCCCCcceEeccc
Confidence 76543 4557788888885
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-23 Score=235.19 Aligned_cols=358 Identities=16% Similarity=0.236 Sum_probs=244.6
Q ss_pred ceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCE-EEE
Q psy467 3 AKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET-LSA 75 (845)
Q Consensus 3 irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~-LaS 75 (845)
.++|++ .+|.++...|+++.-+| --+.+|.|..+|+|.|+++..++.+.+++...+.|++++|..||+. +|+
T Consensus 184 lql~Nvrt~K~v~~f~~~~s~IT~ieqsP-aLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las 262 (910)
T KOG1539|consen 184 LQLWNVRTGKVVYTFQEFFSRITAIEQSP-ALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLAS 262 (910)
T ss_pred EEEEEeccCcEEEEecccccceeEeccCC-cceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEe
Confidence 456764 67999999999999999 8899999999999999999999999999955699999999999986 556
Q ss_pred EECCCcEEEEECCCCcEEEEEc-CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC--C--ceEEEEcCCCCCeEEEEE
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR--K--GCIYTYRGHSKSINSIRF 150 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t--~--~~l~~~~~h~~~V~sLaf 150 (845)
|+..|.+.+||++..+.+..+. .|.+.|....|.|....+++++.|+.+++|=..+ | +.++.-.+|..+..|+.|
T Consensus 263 ~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irf 342 (910)
T KOG1539|consen 263 GRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRF 342 (910)
T ss_pred ccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheee
Confidence 6667999999999888777665 7889999999999999999999999988885543 3 456677789999999999
Q ss_pred e-cCCCEEEEEeCCCcEEEeeeecc----CCceeEEEECCCCccCCCC-----CCC--------------CCcceeecCC
Q psy467 151 S-PDGQWIASGGEDGVVRIGASFHL----TNTSIHVVDLSLVHPLGTP-----PPQ--------------YTSSVPFSHN 206 (845)
Q Consensus 151 S-Pdg~~Lasgs~DG~I~I~~~~~~----~~~~I~vWDl~tg~~l~~~-----~~~--------------~i~svs~spd 206 (845)
. .+|.++.+++.|++++.+..... ..+. .+.....+.+... .-. +..-++.+.+
T Consensus 343 y~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~--~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~ 420 (910)
T KOG1539|consen 343 YGSQGHFILSAKQDRTLRSFSVISESQSQELGQ--LHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKG 420 (910)
T ss_pred eccCcEEEEecccCcchhhhhhhHHHHhHhhcc--cccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecC
Confidence 8 57889999999998776111100 0000 0111110000000 000 1111111112
Q ss_pred CCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcC------------------C-
Q psy467 207 TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN------------------R- 267 (845)
Q Consensus 207 g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~------------------~- 267 (845)
.....++.-.... .+ -+.+....... ......+++.++.|... .
T Consensus 421 ~~~~~tW~~~n~~--~G---~~~L~~~~~~~------------~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r 483 (910)
T KOG1539|consen 421 KRSAYTWNFRNKT--SG---RHVLDPKRFKK------------DDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHR 483 (910)
T ss_pred cceEEEEeccCcc--cc---cEEecCccccc------------cCcceEEEEEeccCceEEEeccCCeEEEEEcccCeee
Confidence 2222222221111 00 00111100000 00001333333333311 0
Q ss_pred --CCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC---------------------------------
Q psy467 268 --SGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF--------------------------------- 312 (845)
Q Consensus 268 --~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~--------------------------------- 312 (845)
-+....+..+|++++...-++ .+++++.+|.+.+||..+.
T Consensus 484 ~sf~~~~ah~~~V~gla~D~~n~-----~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I 558 (910)
T KOG1539|consen 484 KSFGDSPAHKGEVTGLAVDGTNR-----LLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSI 558 (910)
T ss_pred cccccCccccCceeEEEecCCCc-----eEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeE
Confidence 011234456677777766666 7777777777777776543
Q ss_pred --------eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE--
Q psy467 313 --------SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-- 380 (845)
Q Consensus 313 --------~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-- 380 (845)
+.++.+.+|.+.|++++|||||+||++++.|+ |++||+.++.++..+.. ....+++.|| +|++||++
T Consensus 559 ~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~v-d~~~~sls~SPngD~LAT~Hv 637 (910)
T KOG1539|consen 559 RVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLV-DSPCTSLSFSPNGDFLATVHV 637 (910)
T ss_pred EEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEec-CCcceeeEECCCCCEEEEEEe
Confidence 23344568999999999999999999999999 99999999999988763 4678899999 99999998
Q ss_pred ----EEEEee
Q psy467 381 ----VGTWSH 386 (845)
Q Consensus 381 ----VsiW~~ 386 (845)
+.+|..
T Consensus 638 d~~gIylWsN 647 (910)
T KOG1539|consen 638 DQNGIYLWSN 647 (910)
T ss_pred cCceEEEEEc
Confidence 888864
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=237.35 Aligned_cols=275 Identities=25% Similarity=0.360 Sum_probs=234.0
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe--eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.+..|.+.|..+.|-+ +...|++|+.|..|++|++...+ .+.++.+..+.|+.+.|.+++.++++++.|+.+++|++
T Consensus 170 ~ld~h~gev~~v~~l~-~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnv 248 (459)
T KOG0288|consen 170 VLDAHEGEVHDVEFLR-NSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNV 248 (459)
T ss_pred hhhccccccceeEEcc-CcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeec
Confidence 4678999999999998 77899999999999999986655 67888889999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
.+.+...++.+|...|+++.|......+++|+.|.+|++||+....|..++. ....+..|+.+ ...+++|-.|++|+
T Consensus 249 d~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~--~~~~~SgH~DkkvR 325 (459)
T KOG0288|consen 249 DSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS--ISDVISGHFDKKVR 325 (459)
T ss_pred cchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc-ccccccceEec--ceeeeecccccceE
Confidence 9999999999999999999999887779999999999999999988888775 34456677776 56788999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ ||.++..+ ......+. . |
T Consensus 326 f-------------wD~Rs~~~--------------------~~sv~~gg-~-------v-------------------- 344 (459)
T KOG0288|consen 326 F-------------WDIRSADK--------------------TRSVPLGG-R-------V-------------------- 344 (459)
T ss_pred E-------------EeccCCce--------------------eeEeecCc-c-------e--------------------
Confidence 9 99998887 44433332 1 3
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC----CC
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN----SS 323 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh----~~ 323 (845)
+++..++++. .+.+++.|.++.+.|+++....+++... ..
T Consensus 345 -------tSl~ls~~g~-----------------------------~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~as 388 (459)
T KOG0288|consen 345 -------TSLDLSMDGL-----------------------------ELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCAS 388 (459)
T ss_pred -------eeEeeccCCe-----------------------------EEeeecCCCceeeeecccccEEEEeecccccccc
Confidence 5566666655 7888899999999999999888877642 34
Q ss_pred CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCC--CeEEEEEc-CCceEEEE-----EEEEe
Q psy467 324 TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWG--KVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 324 ~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~--~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
..+.+.|||++.|+++|+.|| |+||++.++++...+..... .|++++|+ .|..++++ +.+|.
T Consensus 389 DwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 389 DWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred ccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 589999999999999999999 99999999999988876554 59999999 77666655 77773
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-25 Score=233.25 Aligned_cols=249 Identities=16% Similarity=0.270 Sum_probs=206.6
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-CCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
.+++.+|..+|.-+.||| |.++|++++.|..+.+||+.+|...+.+. +|...+.+++|.|||..+++|+.|+++..||
T Consensus 262 ~~tlvgh~~~V~yi~wSP-DdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wd 340 (519)
T KOG0293|consen 262 KKTLVGHSQPVSYIMWSP-DDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWD 340 (519)
T ss_pred eeeeecccCceEEEEECC-CCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEec
Confidence 578999999999999999 88899999988899999999999888774 3568899999999999999999999999999
Q ss_pred CCCCcEEEEEcCC-CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 87 LAVPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 87 l~tg~~v~~l~~h-~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
++. .......+- ...|.+++.++||+++++.+.|..|++++.++......+. ...+|++++.|.|++++++.-.+..
T Consensus 341 lDg-n~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~qe 418 (519)
T KOG0293|consen 341 LDG-NILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNLQDQE 418 (519)
T ss_pred CCc-chhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEcccCe
Confidence 984 444444432 3569999999999999999999999999998765544443 5668999999999999999999999
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
+++ ||+...+. +..+.||... -+-
T Consensus 419 i~L-------------WDl~e~~l--------------------v~kY~Ghkq~-------~fi---------------- 442 (519)
T KOG0293|consen 419 IHL-------------WDLEENKL--------------------VRKYFGHKQG-------HFI---------------- 442 (519)
T ss_pred eEE-------------eecchhhH--------------------HHHhhccccc-------ceE----------------
Confidence 999 99996666 5555666554 110
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCE
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTI 325 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~V 325 (845)
..-+|-... .. ++++|+.|+.|+||+..+++++.++.||...|
T Consensus 443 ---------IrSCFgg~~-----------------------~~-----fiaSGSED~kvyIWhr~sgkll~~LsGHs~~v 485 (519)
T KOG0293|consen 443 ---------IRSCFGGGN-----------------------DK-----FIASGSEDSKVYIWHRISGKLLAVLSGHSKTV 485 (519)
T ss_pred ---------EEeccCCCC-----------------------cc-----eEEecCCCceEEEEEccCCceeEeecCCccee
Confidence 111222111 11 89999999999999999999999999999999
Q ss_pred EEEEEeC-CCCEEEEEeCCC-EEEEEecC
Q psy467 326 RRLTFSE-GGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 326 tslafSp-dG~~Lasgs~DG-I~IWDl~t 352 (845)
+|++|+| +-.++|+|++|| |+||....
T Consensus 486 NcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 486 NCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred eEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 9999999 456789999999 99998754
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.5e-24 Score=238.84 Aligned_cols=268 Identities=25% Similarity=0.385 Sum_probs=232.7
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC-
Q psy467 20 CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG- 98 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~- 98 (845)
-++|+. .+.||+|... .|++|+..++........+...|+++.|+++|.+|++|..+|.|.|||..+.+.+..+.+
T Consensus 182 lldWss--~n~laValg~-~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~ 258 (484)
T KOG0305|consen 182 LLDWSS--ANVLAVALGQ-SVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGS 258 (484)
T ss_pred Hhhccc--CCeEEEEecc-eEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCC
Confidence 356764 5678887643 799999999887666665689999999999999999999999999999999999999988
Q ss_pred CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCc
Q psy467 99 HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNT 177 (845)
Q Consensus 99 h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~ 177 (845)
|...|-+++|. +..+.+|+.|+.|..+|++..+.... +.+|...|..+.|++|++++|+|+.|+.+.|
T Consensus 259 h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~I--------- 327 (484)
T KOG0305|consen 259 HASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFI--------- 327 (484)
T ss_pred cCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEe---------
Confidence 99999999998 67899999999999999998776555 8889999999999999999999999999999
Q ss_pred eeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeE
Q psy467 178 SIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSA 257 (845)
Q Consensus 178 ~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l 257 (845)
||...... +..+..|... | ..+
T Consensus 328 ----wd~~~~~p--------------------~~~~~~H~aA-------V---------------------------KA~ 349 (484)
T KOG0305|consen 328 ----WDGLSPEP--------------------KFTFTEHTAA-------V---------------------------KAL 349 (484)
T ss_pred ----ccCCCccc--------------------cEEEecccee-------e---------------------------eEe
Confidence 99966555 6677777777 6 778
Q ss_pred EEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe--CCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCC
Q psy467 258 IFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS--ADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE 335 (845)
Q Consensus 258 ~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs--~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~ 335 (845)
+|+|... ++||+|+ .|+.|++||..+++++..+.. ...|..+.|++..+
T Consensus 350 awcP~q~----------------------------~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt-gsQVcsL~Wsk~~k 400 (484)
T KOG0305|consen 350 AWCPWQS----------------------------GLLATGGGSADRCIKFWNTNTGARIDSVDT-GSQVCSLIWSKKYK 400 (484)
T ss_pred eeCCCcc----------------------------CceEEcCCCcccEEEEEEcCCCcEeccccc-CCceeeEEEcCCCC
Confidence 8887765 2888875 699999999999999988885 57899999999988
Q ss_pred EEEEEeCC--C-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 336 CLLGGDTE--G-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 336 ~Lasgs~D--G-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
-|+++... + |.||++.+-+.+..+.+|...|..++++ ||..|+++ ++.|.+-.
T Consensus 401 Ei~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 401 ELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred EEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccC
Confidence 77776543 3 9999999999999999999999999999 99999888 89997644
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-24 Score=228.67 Aligned_cols=273 Identities=19% Similarity=0.289 Sum_probs=231.1
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE----EE-------------e-cCCCCCeEEEEEcCC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI----MS-------------L-SGHSTPVESVQFGNG 69 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i----~~-------------l-~~h~~~V~sLafSpd 69 (845)
+..+..|.-+|.||+++| +..+.++++.+|+|.=|++.+++.. .+ - ..|...|.+++.++|
T Consensus 135 ~~~~~~H~~s~~~vals~-d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D 213 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSP-DDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD 213 (479)
T ss_pred ceeeccccCcceEEEeec-cccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence 356778999999999999 8899999999999999999777632 11 0 268889999999999
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEE
Q psy467 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149 (845)
Q Consensus 70 g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLa 149 (845)
|+|||+|+.|..|.||+.++.+.++.+.+|.+.|.+++|-.....+++++.|+.|++|++.....+.++.+|+..|.++.
T Consensus 214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Id 293 (479)
T KOG0299|consen 214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGID 293 (479)
T ss_pred CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeec
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999998
Q ss_pred EecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEee
Q psy467 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229 (845)
Q Consensus 150 fSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~ 229 (845)
...-++.+-+|+.|+++++ |++..... ..+.++... +
T Consensus 294 aL~reR~vtVGgrDrT~rl-------------wKi~eesq---------------------lifrg~~~s-------i-- 330 (479)
T KOG0299|consen 294 ALSRERCVTVGGRDRTVRL-------------WKIPEESQ---------------------LIFRGGEGS-------I-- 330 (479)
T ss_pred hhcccceEEeccccceeEE-------------Eeccccce---------------------eeeeCCCCC-------e--
Confidence 8877887888889999999 99854333 223344333 3
Q ss_pred ecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC
Q psy467 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 230 i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl 309 (845)
.+++|-.+. .+++|+.+|.|.+|++
T Consensus 331 -------------------------dcv~~In~~------------------------------HfvsGSdnG~IaLWs~ 355 (479)
T KOG0299|consen 331 -------------------------DCVAFINDE------------------------------HFVSGSDNGSIALWSL 355 (479)
T ss_pred -------------------------eeEEEeccc------------------------------ceeeccCCceEEEeee
Confidence 445554433 5999999999999999
Q ss_pred CCCeEEEEec-CC-----------CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC----ceEEEecCCCCCeEEEEEc
Q psy467 310 EKFSLVSTTE-KN-----------SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA----RQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 310 ~s~~~l~tl~-gh-----------~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg----k~l~tl~~h~~~VtsVafS 372 (845)
.+.+++.+.. .| ..+|++++..|...++|+|+.+| |++|.+..+ .++..+. -.+-|++++|+
T Consensus 356 ~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~ 434 (479)
T KOG0299|consen 356 LKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFS 434 (479)
T ss_pred cccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEc
Confidence 9998887765 22 12899999999999999999999 999999987 3445554 56889999999
Q ss_pred -CCceEEEE
Q psy467 373 -GTQLWFRR 380 (845)
Q Consensus 373 -dg~lLaaS 380 (845)
+|+.|+++
T Consensus 435 ~sgk~ivag 443 (479)
T KOG0299|consen 435 NSGKRIVAG 443 (479)
T ss_pred cCCCEEEEe
Confidence 99988888
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-23 Score=218.24 Aligned_cols=244 Identities=20% Similarity=0.355 Sum_probs=203.8
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCC--EEEEEECCCcEEE
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE--TLSAGCQSGSIKI 84 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~--~LaSgs~DGtV~V 84 (845)
.+..+..|.++|+|++. ++.++|+|+.|-+|+|||+.+...+..+-.|.+.|+++.|.++-. .|++|+.||.|.+
T Consensus 35 ~lF~~~aH~~sitavAV---s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~i 111 (362)
T KOG0294|consen 35 PLFAFSAHAGSITALAV---SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIII 111 (362)
T ss_pred ccccccccccceeEEEe---cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEE
Confidence 45678899999999999 579999999999999999999999999999999999999998765 8999999999999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
|+.....++.++++|.+.|+.++.+|.+++-++.+.|+.++.||+-+|+.-....-. ..-..+.|+|.|.+++.++.+
T Consensus 112 w~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~-~~at~v~w~~~Gd~F~v~~~~- 189 (362)
T KOG0294|consen 112 WRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK-NKATLVSWSPQGDHFVVSGRN- 189 (362)
T ss_pred EEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC-CcceeeEEcCCCCEEEEEecc-
Confidence 999999999999999999999999999999999999999999999888765554422 223449999999999988876
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
.|-+ |.+.+... +..+... .. +
T Consensus 190 ~i~i-------------~q~d~A~v--------------------~~~i~~~-~r-------~----------------- 211 (362)
T KOG0294|consen 190 KIDI-------------YQLDNASV--------------------FREIENP-KR-------I----------------- 211 (362)
T ss_pred EEEE-------------EecccHhH--------------------hhhhhcc-cc-------c-----------------
Confidence 4677 87776554 1111100 00 1
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~ 324 (845)
.++.|.. +. .|++|+.|+.|.+||.++..+...+.+|...
T Consensus 212 ----------l~~~~l~-~~-----------------------------~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~R 251 (362)
T KOG0294|consen 212 ----------LCATFLD-GS-----------------------------ELLVGGDNEWISLKDTDSDTPLTEFLAHENR 251 (362)
T ss_pred ----------eeeeecC-Cc-----------------------------eEEEecCCceEEEeccCCCccceeeecchhh
Confidence 2233322 22 7999999999999999999999999999999
Q ss_pred EEEEEE--eCCCCEEEEEeCCC-EEEEEecCC
Q psy467 325 IRRLTF--SEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 325 Vtslaf--SpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
|.++.+ .|++.+|++++.|| |+|||++..
T Consensus 252 VK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 252 VKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred eeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 999985 46789999999999 999999876
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-23 Score=217.57 Aligned_cols=275 Identities=15% Similarity=0.249 Sum_probs=220.2
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-CeeE-EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-SNCI-MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-~~~i-~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
-.+.|.+|+|||....+++.++.||+|++|+++. +..+ +....|.++|.+++|+.||..+++|+.|+.+++||+.++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~- 104 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG- 104 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-
Confidence 4578999999997778888999999999999976 3332 445679999999999999999999999999999999999
Q ss_pred EEEEEcCCCCCeEEEEEccCCC--EEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe
Q psy467 92 VQRTLNGHKSSITSVDFHPYGD--YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169 (845)
Q Consensus 92 ~v~~l~~h~~~V~~lafspdg~--~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~ 169 (845)
++..+..|.++|.++.|-+... .|+||+.|++|+.||++...++.++. ....+.++..- ..+++++..+..|.+
T Consensus 105 Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~--~pm~vVata~r~i~v- 180 (347)
T KOG0647|consen 105 QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVL--YPMAVVATAERHIAV- 180 (347)
T ss_pred CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhcc--CceeEEEecCCcEEE-
Confidence 4666777999999999988665 89999999999999999999988886 45567666654 457888888999999
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
|+++++.. .++.+... ..+.+
T Consensus 181 ------------ynL~n~~t----------------------e~k~~~Sp---Lk~Q~---------------------- 201 (347)
T KOG0647|consen 181 ------------YNLENPPT----------------------EFKRIESP---LKWQT---------------------- 201 (347)
T ss_pred ------------EEcCCCcc----------------------hhhhhcCc---cccee----------------------
Confidence 99976544 11111111 01112
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC--eEEEEecCCCC----
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF--SLVSTTEKNSS---- 323 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~--~~l~tl~gh~~---- 323 (845)
.+++...+.. ..+.|+-.|.+.|..+..+ +.-.+|+.|..
T Consensus 202 -----R~va~f~d~~-----------------------------~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~ 247 (347)
T KOG0647|consen 202 -----RCVACFQDKD-----------------------------GFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSV 247 (347)
T ss_pred -----eEEEEEecCC-----------------------------ceEeeeecceEEEEecCCCCccCceeEEEeccCCCC
Confidence 4455545544 6689999999999998876 44445666642
Q ss_pred -----CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEEEE-EEee
Q psy467 324 -----TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRRVG-TWSH 386 (845)
Q Consensus 324 -----~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaSVs-iW~~ 386 (845)
.|++++|+|.-..|++++.|| +.+||-+....+.+...|..+|++.+|+ +|.+++-+++ -|..
T Consensus 248 ~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA~gYDWSk 318 (347)
T KOG0647|consen 248 NDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYALGYDWSK 318 (347)
T ss_pred CCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEEeeccccc
Confidence 588999999988999999999 9999999888889999999999999999 9998888854 4764
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-24 Score=213.06 Aligned_cols=240 Identities=20% Similarity=0.280 Sum_probs=204.1
Q ss_pred eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEEC
Q psy467 50 CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 50 ~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl 129 (845)
..+.+..+.++|..+.|+-+|+|.++++.|.+|++|+...+.++++..+|...|..++.+.|+..|++|+.|..|.+||+
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV 88 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV 88 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe
Q psy467 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 130 ~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
.+|+.++.+.+|.++|+.++|+.+...+++|+.|..+++ ||.++... ..
T Consensus 89 ~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~-------------wDCRS~s~------------------eP 137 (307)
T KOG0316|consen 89 NTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRL-------------WDCRSRSF------------------EP 137 (307)
T ss_pred ccCeeeeecccccceeeEEEecCcceEEEeccccceeEE-------------EEcccCCC------------------Cc
Confidence 999999999999999999999999999999999999999 99886543 01
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCc
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~ 289 (845)
++.+...... | .++.. .+.
T Consensus 138 iQildea~D~-------V---------------------------~Si~v--~~h------------------------- 156 (307)
T KOG0316|consen 138 IQILDEAKDG-------V---------------------------SSIDV--AEH------------------------- 156 (307)
T ss_pred cchhhhhcCc-------e---------------------------eEEEe--ccc-------------------------
Confidence 3333333333 3 22222 223
Q ss_pred ccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEE
Q psy467 290 LCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQD 368 (845)
Q Consensus 290 ~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~Vts 368 (845)
.+++|+.||+++.||++.|....-+.+| +|++++||+||+++.+++.|+ +++.|-++|+++..+++|.+.=..
T Consensus 157 ----eIvaGS~DGtvRtydiR~G~l~sDy~g~--pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eyk 230 (307)
T KOG0316|consen 157 ----EIVAGSVDGTVRTYDIRKGTLSSDYFGH--PITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYK 230 (307)
T ss_pred ----EEEeeccCCcEEEEEeecceeehhhcCC--cceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceee
Confidence 7999999999999999999987777765 899999999999999999999 999999999999999999876444
Q ss_pred E--EEcCCceEEEE------EEEEeeC
Q psy467 369 L--AVTGTQLWFRR------VGTWSHQ 387 (845)
Q Consensus 369 V--afSdg~lLaaS------VsiW~~d 387 (845)
+ +++.....+++ |..|.+-
T Consensus 231 ldc~l~qsdthV~sgSEDG~Vy~wdLv 257 (307)
T KOG0316|consen 231 LDCCLNQSDTHVFSGSEDGKVYFWDLV 257 (307)
T ss_pred eeeeecccceeEEeccCCceEEEEEec
Confidence 3 45533333333 9999653
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-24 Score=226.86 Aligned_cols=267 Identities=22% Similarity=0.361 Sum_probs=237.4
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
..|+++..+| ....++||+.|..+.++|....+.+..+.||...|+.+.|+++...+++++.|-.|+||..........
T Consensus 220 pgi~ald~~~-s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~ 298 (506)
T KOG0289|consen 220 PGITALDIIP-SSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTS 298 (506)
T ss_pred CCeeEEeecC-CCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccc
Confidence 4689999988 578999999999999999999999999999999999999999999999999999999999988877788
Q ss_pred EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC--CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 96 LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG--HSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 96 l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~--h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
...|..+|+.+..+|.|.||++++.||+..+.|++++.++..... ..-.+++.+|+|||..|.+|..||.+++
T Consensus 299 ~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki----- 373 (506)
T KOG0289|consen 299 SRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI----- 373 (506)
T ss_pred cccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE-----
Confidence 888999999999999999999999999999999999998877654 2346899999999999999999999999
Q ss_pred cCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~ 253 (845)
||+.++.. ++.|.+|... |
T Consensus 374 --------wdlks~~~--------------------~a~Fpght~~-------v-------------------------- 392 (506)
T KOG0289|consen 374 --------WDLKSQTN--------------------VAKFPGHTGP-------V-------------------------- 392 (506)
T ss_pred --------EEcCCccc--------------------cccCCCCCCc-------e--------------------------
Confidence 99998887 7888888888 7
Q ss_pred ceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC-CCCEEEEEEeC
Q psy467 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN-SSTIRRLTFSE 332 (845)
Q Consensus 254 ~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh-~~~VtslafSp 332 (845)
..+.|+.+|. +|++++.|+.|++||++..+...++.-. ...|.+++|.+
T Consensus 393 -k~i~FsENGY-----------------------------~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~ 442 (506)
T KOG0289|consen 393 -KAISFSENGY-----------------------------WLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQ 442 (506)
T ss_pred -eEEEeccCce-----------------------------EEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcC
Confidence 8888998888 9999999999999999988877777642 34799999999
Q ss_pred CCCEEEEEeCCCEEEEEec----CCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 333 GGECLLGGDTEGLKVYGWE----PARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 333 dG~~Lasgs~DGI~IWDl~----tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.|++|+.++.+ ++||-.. ...++..+..|.+..+.+.|. ..++++.+
T Consensus 443 SGt~L~~~g~~-l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~ 494 (506)
T KOG0289|consen 443 SGTYLGIAGSD-LQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLAST 494 (506)
T ss_pred CCCeEEeecce-eEEEEEecccccceeeehhhhcccccceeeecccceEEeec
Confidence 99999999666 5555555 567788888899999999999 77777765
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=219.05 Aligned_cols=243 Identities=25% Similarity=0.363 Sum_probs=208.6
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-CeeEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCc
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-SNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-~~~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
-.+.+..++|++...+.+++++.||+++|||... ..+++.++.|...|.++.|++ ++..+++++.|++|++|+..-++
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~ 138 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN 138 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc
Confidence 3567999999998888999999999999999743 457888999999999999998 55678888999999999999999
Q ss_pred EEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec-CCCEEEEEeCCCcEEEe
Q psy467 92 VQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRIG 169 (845)
Q Consensus 92 ~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I~ 169 (845)
-+.++.+|...|...+|+| ..+.+++++.|+++++||++.......+..|...+.|+.|+. +.+.+++|+.|+.|+.
T Consensus 139 Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~- 217 (311)
T KOG0277|consen 139 SVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRG- 217 (311)
T ss_pred ceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEE-
Confidence 9999999999999999999 568999999999999999987555555888999999999998 6788999999999999
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
||+++-+. .+..+.+|.-. |
T Consensus 218 ------------wDir~~r~-------------------pl~eL~gh~~A-------V---------------------- 237 (311)
T KOG0277|consen 218 ------------WDIRNLRT-------------------PLFELNGHGLA-------V---------------------- 237 (311)
T ss_pred ------------Eehhhccc-------------------cceeecCCceE-------E----------------------
Confidence 99987654 15556666555 5
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-CeEEEEecCCCCCEEEE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-FSLVSTTEKNSSTIRRL 328 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~~~l~tl~gh~~~Vtsl 328 (845)
..+.|+|... .+|++++.|-+++|||... ..++.+...|..-|..+
T Consensus 238 -----Rkvk~Sph~~----------------------------~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~ 284 (311)
T KOG0277|consen 238 -----RKVKFSPHHA----------------------------SLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGL 284 (311)
T ss_pred -----EEEecCcchh----------------------------hHhhhccccceEEecccccchhhhhhhhccceEEecc
Confidence 6677777655 2899999999999999874 45667777888899999
Q ss_pred EEeC-CCCEEEEEeCCC-EEEEEe
Q psy467 329 TFSE-GGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 329 afSp-dG~~Lasgs~DG-I~IWDl 350 (845)
.||+ ++.++|+.+.|. ++||+-
T Consensus 285 Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 285 DWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred ccccccCceeeecccccceeeecc
Confidence 9998 678999999999 999983
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.2e-24 Score=238.03 Aligned_cols=241 Identities=22% Similarity=0.439 Sum_probs=209.8
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC-CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG-HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
...|+++.|++ +|.+||+|..+|.|.|||..+.+.+..+.+ |...|-+++|+ +..+.+|+.++.|..+|++..+..
T Consensus 217 ~~~vtSv~ws~-~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~ 293 (484)
T KOG0305|consen 217 EELVTSVKWSP-DGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHV 293 (484)
T ss_pred CCceEEEEECC-CCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhh
Confidence 78999999999 999999999999999999999999999998 99999999998 678999999999999999987655
Q ss_pred EE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec-CCCEEEEEe--CCCcEEEe
Q psy467 94 RT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGG--EDGVVRIG 169 (845)
Q Consensus 94 ~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP-dg~~Lasgs--~DG~I~I~ 169 (845)
.. +.+|...|+.++|++|++++|+|+.|+.+.|||.....++..+..|...|.+++|+| ....||+|+ .|+.|++
T Consensus 294 ~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~f- 372 (484)
T KOG0305|consen 294 VSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKF- 372 (484)
T ss_pred hhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEE-
Confidence 54 888999999999999999999999999999999988899999999999999999999 567888875 6899999
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
||..++.. +..+..... |
T Consensus 373 ------------wn~~~g~~--------------------i~~vdtgsQ--------V---------------------- 390 (484)
T KOG0305|consen 373 ------------WNTNTGAR--------------------IDSVDTGSQ--------V---------------------- 390 (484)
T ss_pred ------------EEcCCCcE--------------------ecccccCCc--------e----------------------
Confidence 99998887 333222211 2
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLT 329 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtsla 329 (845)
..+.|++..+ .+ +..-|..++.|.||+..+.+++..+.+|...|..++
T Consensus 391 -----csL~Wsk~~k------------------------Ei---~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la 438 (484)
T KOG0305|consen 391 -----CSLIWSKKYK------------------------EL---LSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLA 438 (484)
T ss_pred -----eeEEEcCCCC------------------------EE---EEecCCCCCcEEEEeccccceeeeecCCcceeEEEE
Confidence 5566666554 10 223345678999999999999999999999999999
Q ss_pred EeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 330 FSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 330 fSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+||||..+++|+.|. +++|++-..
T Consensus 439 ~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 439 LSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred ECCCCCEEEEecccCcEEeccccCC
Confidence 999999999999999 999998664
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.5e-24 Score=219.37 Aligned_cols=282 Identities=20% Similarity=0.354 Sum_probs=241.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
++.|.||.+.|+.++... ...++.+++.|.+-+||.++++.++.++.+|.+.|++++|++.+.++++++.|++..||..
T Consensus 141 vre~~GHkDGiW~Vaa~~-tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~ 219 (481)
T KOG0300|consen 141 VRELEGHKDGIWHVAADS-TQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKA 219 (481)
T ss_pred hhhhcccccceeeehhhc-CCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHH
Confidence 567999999999999987 7779999999999999999999999999999999999999999999999999999999972
Q ss_pred ------CC------------------------------C----cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEE
Q psy467 88 ------AV------------------------------P----TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127 (845)
Q Consensus 88 ------~t------------------------------g----~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IW 127 (845)
.. + .++..+.+|.+.|.+..|...|+.+++++.|.+-.+|
T Consensus 220 av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlw 299 (481)
T KOG0300|consen 220 AVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLW 299 (481)
T ss_pred hhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceee
Confidence 00 0 1345678899999999999999999999999999999
Q ss_pred ECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCC
Q psy467 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNT 207 (845)
Q Consensus 128 Dl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg 207 (845)
|++++..+..+.+|....+.++-+|..+++++.+.|.++++ ||++....
T Consensus 300 DVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRL-------------WDFReaI~------------------ 348 (481)
T KOG0300|consen 300 DVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRL-------------WDFREAIQ------------------ 348 (481)
T ss_pred eeccCceeccccCcchhccccccCCcceEEEEeccCceeEe-------------ccchhhcc------------------
Confidence 99999999999999999999999999999999999999999 99984322
Q ss_pred CeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCC
Q psy467 208 SLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQS 287 (845)
Q Consensus 208 ~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg 287 (845)
.+..|.+|... | ++..|..+.+
T Consensus 349 -sV~VFQGHtdt-------V---------------------------TS~vF~~dd~----------------------- 370 (481)
T KOG0300|consen 349 -SVAVFQGHTDT-------V---------------------------TSVVFNTDDR----------------------- 370 (481)
T ss_pred -eeeeecccccc-------e---------------------------eEEEEecCCc-----------------------
Confidence 16778888887 7 7777777665
Q ss_pred CcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEE----EecC
Q psy467 288 PMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYD----AQPM 361 (845)
Q Consensus 288 ~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~----tl~~ 361 (845)
+++|+.|.+|++||+++. .++.++.. .++++.++.+..+..||.--++. |++||+...++-+ .-.+
T Consensus 371 -------vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqg 442 (481)
T KOG0300|consen 371 -------VVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQG 442 (481)
T ss_pred -------eeecCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccc
Confidence 899999999999999875 46777764 67899999999998999888888 9999997655332 3457
Q ss_pred CCCCeEEEEEcC----CceEEEE----EEEEeeC
Q psy467 362 GWGKVQDLAVTG----TQLWFRR----VGTWSHQ 387 (845)
Q Consensus 362 h~~~VtsVafSd----g~lLaaS----VsiW~~d 387 (845)
|...|++++|.+ ..++.++ |.-|.+.
T Consensus 443 HrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in 476 (481)
T KOG0300|consen 443 HRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKIN 476 (481)
T ss_pred cceeeeeeeccccCcccccccccccceeeeeEec
Confidence 999999999993 3344444 7778764
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=213.13 Aligned_cols=273 Identities=18% Similarity=0.271 Sum_probs=221.4
Q ss_pred EEEEEecCCCCEEEEEe-------CCCeEEEEECCCCeeEEEec--CCCCCeEEEEEcCC-CCEEEEEECCCcEEEEECC
Q psy467 19 NCLALGKKSGQVLATGG-------DDKKVNLWALGKSNCIMSLS--GHSTPVESVQFGNG-EETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 19 ~~LafSp~dg~~LaTgs-------~DG~I~IWdl~t~~~i~~l~--~h~~~V~sLafSpd-g~~LaSgs~DGtV~VWDl~ 88 (845)
.++.|||--.++||++. ..|++.|-++...+-+..+. .-.+.+..++|+++ .+.+++++.||++++||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 47889996555666553 46899999986555444433 24678999999985 5678888899999999964
Q ss_pred C-CcEEEEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec-CCCEEEEEeCCCc
Q psy467 89 V-PTVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGV 165 (845)
Q Consensus 89 t-g~~v~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~ 165 (845)
. ..++..++.|..+|.++.|++. +..+++++.|++|++|+...++.+.++++|...|...+|+| .++.+++++.|+.
T Consensus 92 ~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~ 171 (311)
T KOG0277|consen 92 MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGT 171 (311)
T ss_pred CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCce
Confidence 3 3678889999999999999984 46778889999999999999999999999999999999999 6889999999999
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
+++ ||++.... ...+..|... +
T Consensus 172 l~l-------------wdvr~~gk--------------------~~~i~ah~~E-------i------------------ 193 (311)
T KOG0277|consen 172 LRL-------------WDVRSPGK--------------------FMSIEAHNSE-------I------------------ 193 (311)
T ss_pred EEE-------------EEecCCCc--------------------eeEEEeccce-------e------------------
Confidence 999 99875433 2225555544 4
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCC
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSST 324 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~ 324 (845)
.++.|+.-.. ++|+||+.|+.|+.||+++- .++..+.+|.-.
T Consensus 194 ---------l~cdw~ky~~----------------------------~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~A 236 (311)
T KOG0277|consen 194 ---------LCCDWSKYNH----------------------------NVLATGGVDNLVRGWDIRNLRTPLFELNGHGLA 236 (311)
T ss_pred ---------EeecccccCC----------------------------cEEEecCCCceEEEEehhhccccceeecCCceE
Confidence 5666665443 28999999999999999874 578899999999
Q ss_pred EEEEEEeCC-CCEEEEEeCCC-EEEEEecCC-ceEEEecCCCCCeEEEEEc--CCceEEEE-----EEEEee
Q psy467 325 IRRLTFSEG-GECLLGGDTEG-LKVYGWEPA-RQYDAQPMGWGKVQDLAVT--GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 325 VtslafSpd-G~~Lasgs~DG-I~IWDl~tg-k~l~tl~~h~~~VtsVafS--dg~lLaaS-----VsiW~~ 386 (845)
|..+.|||. ...||+++.|- ++|||...+ .++.+...|+.-|.++.|| +..++|.. +.+|..
T Consensus 237 VRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 237 VRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred EEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 999999995 56889999999 999999854 4567778899999999999 67777666 888863
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-23 Score=217.78 Aligned_cols=253 Identities=23% Similarity=0.388 Sum_probs=212.2
Q ss_pred ceeee-----eEEeccCCCcEEEEEEecCC--CCEEEEEeCCCeEEEEECCCCeeE----EEecCCCCCeEEEEEcCCCC
Q psy467 3 AKVEK-----AEDFMAHGASVNCLALGKKS--GQVLATGGDDKKVNLWALGKSNCI----MSLSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 3 irlw~-----l~~L~gH~~~V~~LafSp~d--g~~LaTgs~DG~I~IWdl~t~~~i----~~l~~h~~~V~sLafSpdg~ 71 (845)
+|+|. .+++.||.++|.+++|.-.+ ...|++++.|.++++|.++.++.. +.-.||...|.++...++|.
T Consensus 127 ~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgt 206 (423)
T KOG0313|consen 127 SRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGT 206 (423)
T ss_pred eEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCC
Confidence 57787 46899999999988885422 236999999999999998776543 33459999999999999999
Q ss_pred EEEEEECCCcEEEEECC-------------------------CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEE
Q psy467 72 TLSAGCQSGSIKIWNLA-------------------------VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~-------------------------tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~I 126 (845)
.+++|+.|.+|.||+.. ++.++.++.+|..+|.++.|++ ...+++++.|.+|+.
T Consensus 207 r~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~ 285 (423)
T KOG0313|consen 207 RFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKV 285 (423)
T ss_pred eEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEE
Confidence 99999999999999932 1235567789999999999997 668999999999999
Q ss_pred EECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCC
Q psy467 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHN 206 (845)
Q Consensus 127 WDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spd 206 (845)
||+.++.++.++. ....+.|+..+|..++|++|+.|..+++ ||.+++.-
T Consensus 286 WDletg~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl-------------~DPR~~~g----------------- 334 (423)
T KOG0313|consen 286 WDLETGGLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRL-------------WDPRTGDG----------------- 334 (423)
T ss_pred EEeecccceeeee-cCcceeEeecccccceeeecCCCCceee-------------cCCCCCCC-----------------
Confidence 9999999998887 4567999999999999999999999999 99987643
Q ss_pred CCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 207 TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 207 g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
.-....+.+|... | ..+.|+|...
T Consensus 335 s~v~~s~~gH~nw-------V---------------------------ssvkwsp~~~---------------------- 358 (423)
T KOG0313|consen 335 SVVSQSLIGHKNW-------V---------------------------SSVKWSPTNE---------------------- 358 (423)
T ss_pred ceeEEeeecchhh-------h---------------------------hheecCCCCc----------------------
Confidence 0114456667666 5 6666666654
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCe-EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFS-LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~-~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
+.|++|+.|+++++||+++.+ ++..+.+|...|.++.|+ ++..|++|+.|. |+|+.-
T Consensus 359 ------~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 359 ------FQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred ------eEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEEecc
Confidence 289999999999999999877 999999999999999998 466899999999 998764
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-22 Score=233.02 Aligned_cols=165 Identities=16% Similarity=0.307 Sum_probs=143.1
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe--------eEEEecCCCCCeEEEEEcCCCCE-EEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN--------CIMSLSGHSTPVESVQFGNGEET-LSAGCQ 78 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~--------~i~~l~~h~~~V~sLafSpdg~~-LaSgs~ 78 (845)
+..+.+|.+.|.+++|+|.++.+||+|+.||+|+|||+.++. .+..+.+|...|.+++|+|++.. |++++.
T Consensus 67 v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~ 146 (568)
T PTZ00420 67 VIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGF 146 (568)
T ss_pred EEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeC
Confidence 467899999999999999558999999999999999997542 34567889999999999998876 578899
Q ss_pred CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEE-----EEEecC
Q psy467 79 SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS-----IRFSPD 153 (845)
Q Consensus 79 DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~s-----LafSPd 153 (845)
|++|+|||+.+++.+..+. |...|.+++|+|+|.+|++++.|+.|++||+++++.+..+.+|.+.+.+ ..|+++
T Consensus 147 DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d 225 (568)
T PTZ00420 147 DSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGD 225 (568)
T ss_pred CCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCC
Confidence 9999999999998887776 6678999999999999999999999999999999999999999876543 335588
Q ss_pred CCEEEEEeCCC----cEEEeeeeccCCceeEEEECCC
Q psy467 154 GQWIASGGEDG----VVRIGASFHLTNTSIHVVDLSL 186 (845)
Q Consensus 154 g~~Lasgs~DG----~I~I~~~~~~~~~~I~vWDl~t 186 (845)
+++|++++.|+ .|++ ||++.
T Consensus 226 ~~~IlTtG~d~~~~R~VkL-------------WDlr~ 249 (568)
T PTZ00420 226 DNYILSTGFSKNNMREMKL-------------WDLKN 249 (568)
T ss_pred CCEEEEEEcCCCCccEEEE-------------EECCC
Confidence 89999988775 6888 99985
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.4e-23 Score=207.82 Aligned_cols=246 Identities=21% Similarity=0.385 Sum_probs=201.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC-----CCcE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ-----SGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~-----DGtV 82 (845)
+-++.||++.|+|++.+. +.+.++||+.|.++++||+++|+.+..+. ...+|..+.|+++|++++.... .+.|
T Consensus 45 lGty~GHtGavW~~Did~-~s~~liTGSAD~t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v 122 (327)
T KOG0643|consen 45 LGTYDGHTGAVWCCDIDW-DSKHLITGSADQTAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFV 122 (327)
T ss_pred eeeecCCCceEEEEEecC-CcceeeeccccceeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEE
Confidence 578999999999999998 88999999999999999999999999988 6778999999999998887654 4779
Q ss_pred EEEECC-------CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-EEEEcCCCCCeEEEEEecCC
Q psy467 83 KIWNLA-------VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC-IYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 83 ~VWDl~-------tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~-l~~~~~h~~~V~sLafSPdg 154 (845)
.++|++ ..++...+..+.+.++.+-|.|-+++|++|..||.|.+||++++.. +..-..|...|+.|++++|.
T Consensus 123 ~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~ 202 (327)
T KOG0643|consen 123 SVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDR 202 (327)
T ss_pred EEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCc
Confidence 999998 4566788888889999999999999999999999999999999754 55557799999999999999
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
.++++++.|.+-++ ||+.+... +.++..... +
T Consensus 203 T~FiT~s~Dttakl-------------~D~~tl~v--------------------~Kty~te~P--------v------- 234 (327)
T KOG0643|consen 203 TYFITGSKDTTAKL-------------VDVRTLEV--------------------LKTYTTERP--------V------- 234 (327)
T ss_pred ceEEecccCcccee-------------eeccceee--------------------EEEeeeccc--------c-------
Confidence 99999999999999 99998777 444432221 1
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC------------
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR------------ 302 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG------------ 302 (845)
.+.+++|... .++.|+...
T Consensus 235 --------------------N~aaisP~~d-----------------------------~VilgGGqeA~dVTTT~~r~G 265 (327)
T KOG0643|consen 235 --------------------NTAAISPLLD-----------------------------HVILGGGQEAMDVTTTSTRAG 265 (327)
T ss_pred --------------------cceecccccc-----------------------------eEEecCCceeeeeeeeccccc
Confidence 4444444333 344333221
Q ss_pred --eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 303 --TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 303 --~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
..++|++-..+.+..+++|-++|++++|+|+|+..++|+.|| |++.-++.
T Consensus 266 KFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 266 KFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred chhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence 123344333456677889999999999999999999999999 99886654
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-22 Score=206.53 Aligned_cols=267 Identities=17% Similarity=0.248 Sum_probs=214.0
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~ 94 (845)
...|++|.|+| .++.|++++.||++++|++........++ |..++.+++|.+ ...+++|+.||.|+.+|+.++.. .
T Consensus 13 ~d~IS~v~f~~-~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~-~ 88 (323)
T KOG1036|consen 13 EDGISSVKFSP-SSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNE-D 88 (323)
T ss_pred hhceeeEEEcC-cCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEeccCceEEEEEecCCcc-e
Confidence 56899999998 77788888899999999998876666666 999999999986 56789999999999999998764 4
Q ss_pred EEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeecc
Q psy467 95 TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 95 ~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~ 174 (845)
.+..|...|.|+.+++....+++|+.|++|++||.+.......+. ....|.++... |+.|++|+.|..+.+
T Consensus 89 ~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v~--g~~LvVg~~~r~v~i------ 159 (323)
T KOG1036|consen 89 QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDVS--GNRLVVGTSDRKVLI------ 159 (323)
T ss_pred eeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccc-cCceEEEEecc--CCEEEEeecCceEEE------
Confidence 455699999999999988899999999999999999766665555 34478888776 889999999999999
Q ss_pred CCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCc
Q psy467 175 TNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCD 254 (845)
Q Consensus 175 ~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~ 254 (845)
||+++.... . ...... ..+.+
T Consensus 160 -------yDLRn~~~~--------------------~--q~reS~---lkyqt--------------------------- 180 (323)
T KOG1036|consen 160 -------YDLRNLDEP--------------------F--QRRESS---LKYQT--------------------------- 180 (323)
T ss_pred -------EEcccccch--------------------h--hhcccc---ceeEE---------------------------
Confidence 999976651 0 000000 01112
Q ss_pred eeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC----eEEEEecCCC--------
Q psy467 255 YSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF----SLVSTTEKNS-------- 322 (845)
Q Consensus 255 ~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~----~~l~tl~gh~-------- 322 (845)
.++++-|++. -+++++-||.|.+=.++.. +....|+.|.
T Consensus 181 R~v~~~pn~e-----------------------------Gy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~ 231 (323)
T KOG1036|consen 181 RCVALVPNGE-----------------------------GYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEI 231 (323)
T ss_pred EEEEEecCCC-----------------------------ceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceE
Confidence 4555555444 6788899999888666554 3445566663
Q ss_pred -CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEEEE
Q psy467 323 -STIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRRVG 382 (845)
Q Consensus 323 -~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaSVs 382 (845)
-+|++++|+|-...+|||+.|| |.+||..+.+.+..+......|..++|+ +|..||++-+
T Consensus 232 ~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 232 IYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 3799999999999999999999 9999999999999998888889999999 9999998843
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-22 Score=202.65 Aligned_cols=235 Identities=15% Similarity=0.251 Sum_probs=207.3
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t 89 (845)
...+|.+.|..++|+|...+++++++.|.+|++||+..+++..........| -+.|+|+|+++++++.|..|...|.++
T Consensus 59 ~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~ 137 (313)
T KOG1407|consen 59 VYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDART 137 (313)
T ss_pred cccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecc
Confidence 4679999999999999899999999999999999999999999887555544 578999999999999999999999999
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~ 169 (845)
.+.+...+ ....+..++|+-++++|+.....|.|.|.....-+++.++++|.....|+.|+|+|++||+|+.|..+.+
T Consensus 138 ~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSL- 215 (313)
T KOG1407|consen 138 YKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSL- 215 (313)
T ss_pred cceeehhc-ccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeec-
Confidence 88777765 5567888999988888888788899999999999999999999999999999999999999999999999
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
||+...-+ +..+..+.-+ |
T Consensus 216 ------------WD~~ELiC--------------------~R~isRldwp-------V---------------------- 234 (313)
T KOG1407|consen 216 ------------WDVDELIC--------------------ERCISRLDWP-------V---------------------- 234 (313)
T ss_pred ------------cChhHhhh--------------------heeeccccCc-------e----------------------
Confidence 99987766 5555555555 5
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLT 329 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtsla 329 (845)
..+.|+.+|+ +||+|+.|..|-|=++++|..+..++ +.++...++
T Consensus 235 -----RTlSFS~dg~-----------------------------~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVA 279 (313)
T KOG1407|consen 235 -----RTLSFSHDGR-----------------------------MLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVA 279 (313)
T ss_pred -----EEEEeccCcc-----------------------------eeeccCccceEEeEecccCCeEEEee-ccCCceeEE
Confidence 6666666666 99999999999999999999999988 578899999
Q ss_pred EeCCCCEEEEEeCC
Q psy467 330 FSEGGECLLGGDTE 343 (845)
Q Consensus 330 fSpdG~~Lasgs~D 343 (845)
|+|...+||.+++|
T Consensus 280 WHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 280 WHPKRPLLAYACDD 293 (313)
T ss_pred ecCCCceeeEEecC
Confidence 99999999988765
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.2e-23 Score=211.05 Aligned_cols=281 Identities=19% Similarity=0.351 Sum_probs=227.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC------------C------eeEEEecCCCCCeEEEEEcCC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK------------S------NCIMSLSGHSTPVESVQFGNG 69 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t------------~------~~i~~l~~h~~~V~sLafSpd 69 (845)
...+..|.+.+.+.+|++ +|.++|||+.|..|+|.|++. + -.++++..|.+.|+++.|+|.
T Consensus 105 t~ylt~HK~~cR~aafs~-DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr 183 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSP-DGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR 183 (430)
T ss_pred eEEEeecccceeeeeeCC-CCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch
Confidence 456789999999999999 999999999999999999861 1 246788889999999999999
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEE---EEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc---CCCC
Q psy467 70 EETLSAGCQSGSIKIWNLAVPTVQR---TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSK 143 (845)
Q Consensus 70 g~~LaSgs~DGtV~VWDl~tg~~v~---~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~---~h~~ 143 (845)
...|++|+.|++|+++|.......+ .++ ...+|.++.|+|.|.+|++|..-.++++||+++.++...-. .|.+
T Consensus 184 e~ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ 262 (430)
T KOG0640|consen 184 ETILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTG 262 (430)
T ss_pred hheEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccccc
Confidence 9999999999999999998653332 333 45689999999999999999999999999999988876543 5888
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec-CCCCCcc
Q psy467 144 SINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK-GRPGGTK 222 (845)
Q Consensus 144 ~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~-h~~~~~~ 222 (845)
.|+++.+++.|++.++++.||.|++ ||--++++ +.++.. |.+.
T Consensus 263 ai~~V~Ys~t~~lYvTaSkDG~Ikl-------------wDGVS~rC--------------------v~t~~~AH~gs--- 306 (430)
T KOG0640|consen 263 AITQVRYSSTGSLYVTASKDGAIKL-------------WDGVSNRC--------------------VRTIGNAHGGS--- 306 (430)
T ss_pred ceeEEEecCCccEEEEeccCCcEEe-------------eccccHHH--------------------HHHHHhhcCCc---
Confidence 9999999999999999999999999 99888777 333222 2111
Q ss_pred ceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC
Q psy467 223 AKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR 302 (845)
Q Consensus 223 ~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG 302 (845)
.| .+..|..+++ ++.+.+.|.
T Consensus 307 ---ev---------------------------cSa~Ftkn~k-----------------------------yiLsSG~DS 327 (430)
T KOG0640|consen 307 ---EV---------------------------CSAVFTKNGK-----------------------------YILSSGKDS 327 (430)
T ss_pred ---ee---------------------------eeEEEccCCe-----------------------------EEeecCCcc
Confidence 02 4555555555 999999999
Q ss_pred eEEEEECCCCeEEEEecCC-----CCCEEEEEEeCCCCEEEEEeCCC--EEEEEecCCceEEEe-cCCCCCeEEEEEc-C
Q psy467 303 TVNFWDLEKFSLVSTTEKN-----SSTIRRLTFSEGGECLLGGDTEG--LKVYGWEPARQYDAQ-PMGWGKVQDLAVT-G 373 (845)
Q Consensus 303 ~I~IWDl~s~~~l~tl~gh-----~~~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk~l~tl-~~h~~~VtsVafS-d 373 (845)
.|++|.+.++.++.++.|- ...-+...|+....|++.-++.. +.-||..++..+..+ .+|.+.++.+.-| .
T Consensus 328 ~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~ 407 (430)
T KOG0640|consen 328 TVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPV 407 (430)
T ss_pred eeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCC
Confidence 9999999999999998763 12345667888888988877655 999999987655444 4799999999999 4
Q ss_pred Cc-eEEEE----EEEEe
Q psy467 374 TQ-LWFRR----VGTWS 385 (845)
Q Consensus 374 g~-lLaaS----VsiW~ 385 (845)
+. ++.++ ...|-
T Consensus 408 ~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 408 EPAFMTCSDDFRARFWY 424 (430)
T ss_pred CCceeeecccceeeeee
Confidence 43 34444 77774
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-24 Score=221.48 Aligned_cols=271 Identities=21% Similarity=0.316 Sum_probs=216.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE--------cCCCCCeEEEEEccCCCEEEEEECCCeEEEE
Q psy467 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL--------NGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127 (845)
Q Consensus 56 ~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l--------~~h~~~V~~lafspdg~~Lasgs~DG~I~IW 127 (845)
+..+.+.|..|+|||+||++|+.||.|.+||.-+|+..+.+ --+...|.|+.|+.|...+++|+.||.|++|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 45678999999999999999999999999999998765543 2467899999999999999999999999999
Q ss_pred ECCCCceEEEEc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC--CCCCcceeec
Q psy467 128 DLRRKGCIYTYR-GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP--PQYTSSVPFS 204 (845)
Q Consensus 128 Dl~t~~~l~~~~-~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~--~~~i~svs~s 204 (845)
.+++|.|++.|. +|...|+|+.|+.|+..+++++.|.++++ .-+.+|+++..+. ...+....|+
T Consensus 291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRi-------------HGlKSGK~LKEfrGHsSyvn~a~ft 357 (508)
T KOG0275|consen 291 RIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRI-------------HGLKSGKCLKEFRGHSSYVNEATFT 357 (508)
T ss_pred EEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEE-------------eccccchhHHHhcCccccccceEEc
Confidence 999999999997 79999999999999999999999999999 9999999977664 6777888888
Q ss_pred CCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEc
Q psy467 205 HNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSIL 284 (845)
Q Consensus 205 pdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafS 284 (845)
++|..+..... ++.+.||...+.. ..-.|.| .....+|+++..-
T Consensus 358 ~dG~~iisaSs------DgtvkvW~~Ktte--------------------C~~Tfk~----------~~~d~~vnsv~~~ 401 (508)
T KOG0275|consen 358 DDGHHIISASS------DGTVKVWHGKTTE--------------------CLSTFKP----------LGTDYPVNSVILL 401 (508)
T ss_pred CCCCeEEEecC------CccEEEecCcchh--------------------hhhhccC----------CCCcccceeEEEc
Confidence 88877655321 2223343221110 0111222 2235677888887
Q ss_pred CCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC---CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec
Q psy467 285 PQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK---NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP 360 (845)
Q Consensus 285 Pdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g---h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~ 360 (845)
|.+.. .++++...++|+|.++. |+.++.+.. ..+...+.+.||.|.++.+.+.|+ ++.|.+.+|++-.++.
T Consensus 402 PKnpe----h~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~ 476 (508)
T KOG0275|consen 402 PKNPE----HFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLP 476 (508)
T ss_pred CCCCc----eEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeee
Confidence 77654 78888888899999876 677777763 245677788999999999999999 9999999999999999
Q ss_pred CCCCCeEEEEEcCCceEEEE
Q psy467 361 MGWGKVQDLAVTGTQLWFRR 380 (845)
Q Consensus 361 ~h~~~VtsVafSdg~lLaaS 380 (845)
.|...|-.++.++.+.+.++
T Consensus 477 VhEkdvIGl~HHPHqNllAs 496 (508)
T KOG0275|consen 477 VHEKDVIGLTHHPHQNLLAS 496 (508)
T ss_pred cccccccccccCcccchhhh
Confidence 99999999998854444444
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-21 Score=189.85 Aligned_cols=285 Identities=18% Similarity=0.246 Sum_probs=218.6
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC------C---------eeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK------S---------NCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t------~---------~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
+-..+..|.+++|+| .|.+.|+|+...+.+|..... + ...++-+.|.+.|+|.+|+|+|++|++
T Consensus 28 ~l~dsqairav~fhp-~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliat 106 (350)
T KOG0641|consen 28 ILEDSQAIRAVAFHP-AGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIAT 106 (350)
T ss_pred EecchhheeeEEecC-CCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEe
Confidence 334567899999999 999999999999998875421 1 112334568999999999999999999
Q ss_pred EECCCcEEEEECCCCcE-----EEEEcCCCCCeEEEEEccC----CCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCe
Q psy467 76 GCQSGSIKIWNLAVPTV-----QRTLNGHKSSITSVDFHPY----GDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSI 145 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~-----v~~l~~h~~~V~~lafspd----g~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V 145 (845)
|+.|.+|++.-.....+ -..+.-|.+.|..++|..+ +..|++++ .|..|++-|..+++..+.+.+|.+.|
T Consensus 107 gsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghi 186 (350)
T KOG0641|consen 107 GSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHI 186 (350)
T ss_pred cCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccE
Confidence 99999999987654322 2356679999999999754 35666654 56788888999999999999999999
Q ss_pred EEE-EEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 146 NSI-RFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sL-afSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
.++ .|+ |-++++|+.|.+|++ ||++-..+ +.++......+.
T Consensus 187 lalyswn--~~m~~sgsqdktirf-------------wdlrv~~~--------------------v~~l~~~~~~~g--- 228 (350)
T KOG0641|consen 187 LALYSWN--GAMFASGSQDKTIRF-------------WDLRVNSC--------------------VNTLDNDFHDGG--- 228 (350)
T ss_pred EEEEEec--CcEEEccCCCceEEE-------------Eeeeccce--------------------eeeccCcccCCC---
Confidence 876 454 889999999999999 99986665 333221111100
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ ....+..++..|.|+ +|++|-.|...
T Consensus 229 --l----------------------essavaav~vdpsgr-----------------------------ll~sg~~dssc 255 (350)
T KOG0641|consen 229 --L----------------------ESSAVAAVAVDPSGR-----------------------------LLASGHADSSC 255 (350)
T ss_pred --c----------------------ccceeEEEEECCCcc-----------------------------eeeeccCCCce
Confidence 0 000114455555555 99999999999
Q ss_pred EEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC----ceEEEecCCCCCeEEEEEcC--CceE
Q psy467 305 NFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA----RQYDAQPMGWGKVQDLAVTG--TQLW 377 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg----k~l~tl~~h~~~VtsVafSd--g~lL 377 (845)
.+||++.+.+++.+..|...|.|+.|||...||.+++.|. |++=|++.. -.+.....|...+-.+.|++ =.+|
T Consensus 256 ~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfi 335 (350)
T KOG0641|consen 256 MLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFI 335 (350)
T ss_pred EEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceee
Confidence 9999999999999999999999999999999999999999 999998753 12344566889999999994 3444
Q ss_pred EEE----EEEEeeC
Q psy467 378 FRR----VGTWSHQ 387 (845)
Q Consensus 378 aaS----VsiW~~d 387 (845)
..+ +..|...
T Consensus 336 sssadkt~tlwa~~ 349 (350)
T KOG0641|consen 336 SSSADKTATLWALN 349 (350)
T ss_pred eccCcceEEEeccC
Confidence 444 7888653
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=234.15 Aligned_cols=240 Identities=20% Similarity=0.348 Sum_probs=190.5
Q ss_pred EEec-CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-----------------------------------------
Q psy467 52 MSLS-GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV----------------------------------------- 89 (845)
Q Consensus 52 ~~l~-~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t----------------------------------------- 89 (845)
+.+. .|.+.|+++.||+||+|||+|+.||.|+||.+..
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 4455 7999999999999999999999999999998754
Q ss_pred -------------------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEE
Q psy467 90 -------------------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150 (845)
Q Consensus 90 -------------------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLaf 150 (845)
.++++.+.+|.+.|.++.|+.++ +|++++.|.+|++|++....|+..|. |..-|+|++|
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaF 417 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAF 417 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEe
Confidence 01223456899999999999765 89999999999999999999999997 9999999999
Q ss_pred ec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEee
Q psy467 151 SP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229 (845)
Q Consensus 151 SP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~ 229 (845)
+| |.+||++|+-||.++| |++...+. + .+..-.
T Consensus 418 nPvDDryFiSGSLD~KvRi-------------WsI~d~~V--------------------v-~W~Dl~------------ 451 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDGKVRL-------------WSISDKKV--------------------V-DWNDLR------------ 451 (712)
T ss_pred cccCCCcEeecccccceEE-------------eecCcCee--------------------E-eehhhh------------
Confidence 99 8899999999999999 99876554 1 111111
Q ss_pred ecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC
Q psy467 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 230 i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl 309 (845)
.-|++++|+|||+ +.+.|+.+|.+++|++
T Consensus 452 ----------------------------------------------~lITAvcy~PdGk-----~avIGt~~G~C~fY~t 480 (712)
T KOG0283|consen 452 ----------------------------------------------DLITAVCYSPDGK-----GAVIGTFNGYCRFYDT 480 (712)
T ss_pred ----------------------------------------------hhheeEEeccCCc-----eEEEEEeccEEEEEEc
Confidence 1245555555555 9999999999999999
Q ss_pred CCCeEEEEecC--C------CCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEecCCCC--CeEEEEEc-CCce
Q psy467 310 EKFSLVSTTEK--N------SSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQPMGWG--KVQDLAVT-GTQL 376 (845)
Q Consensus 310 ~s~~~l~tl~g--h------~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~--~VtsVafS-dg~l 376 (845)
...+.+..+.- | ...|+.+.|.|.. ..|++.+.|. |||||..+..++..++++.. .=....|+ ||++
T Consensus 481 ~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~ 560 (712)
T KOG0283|consen 481 EGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKH 560 (712)
T ss_pred cCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCE
Confidence 98877665441 1 2379999999743 3466667777 99999988888888887553 23455677 9999
Q ss_pred EEEE-----EEEEeeCCCC
Q psy467 377 WFRR-----VGTWSHQDSG 390 (845)
Q Consensus 377 LaaS-----VsiW~~d~~~ 390 (845)
|+.+ |.+|..+..+
T Consensus 561 IVs~seDs~VYiW~~~~~~ 579 (712)
T KOG0283|consen 561 IVSASEDSWVYIWKNDSFN 579 (712)
T ss_pred EEEeecCceEEEEeCCCCc
Confidence 9988 9999875544
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=221.78 Aligned_cols=241 Identities=23% Similarity=0.392 Sum_probs=204.1
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCC-CCEEEEEECCCcEEEEEC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG-EETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpd-g~~LaSgs~DGtV~VWDl 87 (845)
++|.-....|.+++|.. ||.+||.|+..|.|+|||..+...++.+..|+.+|..+.|+|. +..+++|++|+.+++||+
T Consensus 62 k~~srFk~~v~s~~fR~-DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~ 140 (487)
T KOG0310|consen 62 KTFSRFKDVVYSVDFRS-DGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDL 140 (487)
T ss_pred hhHHhhccceeEEEeec-CCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEc
Confidence 34556678899999988 9999999999999999998776778889999999999999995 556788888999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
.+...+..+.+|+..|.|.+|+|-. ..+++|+.||.|++||++.. ..+.++. |..+|..+.+-|.|..+++++. ..
T Consensus 141 s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAgG-n~ 218 (487)
T KOG0310|consen 141 STAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAGG-NS 218 (487)
T ss_pred CCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcCC-Ce
Confidence 9988777899999999999999965 57899999999999999887 6666775 8999999999999999998875 47
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
+++ ||+.+|..+ +.....|... |
T Consensus 219 vkV-------------WDl~~G~ql-------------------l~~~~~H~Kt-------V------------------ 241 (487)
T KOG0310|consen 219 VKV-------------WDLTTGGQL-------------------LTSMFNHNKT-------V------------------ 241 (487)
T ss_pred EEE-------------EEecCCcee-------------------hhhhhcccce-------E------------------
Confidence 899 999966651 2222335444 4
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCE
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTI 325 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~V 325 (845)
+|+.+..++. .|++|+-|+.|++||+.+.+.++.+.- .++|
T Consensus 242 ---------TcL~l~s~~~-----------------------------rLlS~sLD~~VKVfd~t~~Kvv~s~~~-~~pv 282 (487)
T KOG0310|consen 242 ---------TCLRLASDST-----------------------------RLLSGSLDRHVKVFDTTNYKVVHSWKY-PGPV 282 (487)
T ss_pred ---------EEEEeecCCc-----------------------------eEeecccccceEEEEccceEEEEeeec-ccce
Confidence 5666655555 899999999999999999999988874 7899
Q ss_pred EEEEEeCCCCEEEEEeCCC-EEEE
Q psy467 326 RRLTFSEGGECLLGGDTEG-LKVY 348 (845)
Q Consensus 326 tslafSpdG~~Lasgs~DG-I~IW 348 (845)
.+++.+|+++.++.|..|| +.+-
T Consensus 283 Lsiavs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 283 LSIAVSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred eeEEecCCCceEEEecccceeeee
Confidence 9999999999999999999 4443
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-22 Score=215.30 Aligned_cols=247 Identities=20% Similarity=0.376 Sum_probs=214.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
+..|+||...|+.+.|+| +...+++++.|-.|+||.............|..+|+.+..+|.|.||++++.||+..+.|+
T Consensus 254 l~~~~Gh~kki~~v~~~~-~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~ 332 (506)
T KOG0289|consen 254 LATLKGHTKKITSVKFHK-DLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDI 332 (506)
T ss_pred hhhccCcceEEEEEEecc-chhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEc
Confidence 467999999999999999 8899999999999999999888888888899999999999999999999999999999999
Q ss_pred CCCcEEEEEcCC--CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 88 AVPTVQRTLNGH--KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 88 ~tg~~v~~l~~h--~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
+++.++...... .-.+++.+|||||..|.+|..||.|++||+.++..+..|.+|.++|..++|+.+|-||++++.|+.
T Consensus 333 ~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~ 412 (506)
T KOG0289|consen 333 SSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGS 412 (506)
T ss_pred cCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCe
Confidence 999988877632 235899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
|++ ||++..+. +.++...... .+
T Consensus 413 V~l-------------wDLRKl~n--------------------~kt~~l~~~~------~v------------------ 435 (506)
T KOG0289|consen 413 VKL-------------WDLRKLKN--------------------FKTIQLDEKK------EV------------------ 435 (506)
T ss_pred EEE-------------EEehhhcc--------------------cceeeccccc------cc------------------
Confidence 999 99997665 3333221110 02
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC--CCCeEEEEecCCCC
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL--EKFSLVSTTEKNSS 323 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl--~s~~~l~tl~gh~~ 323 (845)
..+.|.+.|. +|+.++.|=.|++++- .++.++..+..|.+
T Consensus 436 ---------~s~~fD~SGt-----------------------------~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg 477 (506)
T KOG0289|consen 436 ---------NSLSFDQSGT-----------------------------YLGIAGSDLQVYICKKKTKSWTEIKELADHSG 477 (506)
T ss_pred ---------eeEEEcCCCC-----------------------------eEEeecceeEEEEEecccccceeeehhhhccc
Confidence 5666777666 8999988877777773 46788888989999
Q ss_pred CEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 324 TIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 324 ~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
..+++.|..+.+++++++.|. ++++.+
T Consensus 478 ~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 478 LSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred ccceeeecccceEEeeccchhheEEeec
Confidence 999999999999999999998 887754
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-22 Score=223.29 Aligned_cols=275 Identities=18% Similarity=0.317 Sum_probs=236.6
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE--EEecCCCCCeEE-EEEcC-CCCEEEEEECCCcEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI--MSLSGHSTPVES-VQFGN-GEETLSAGCQSGSIK 83 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i--~~l~~h~~~V~s-LafSp-dg~~LaSgs~DGtV~ 83 (845)
-+.+.||...|..+++.+ +..+++++.||++++|+-...+.+ +.+.+|.+-|.+ +++-+ ++-.|++|+.|.+|.
T Consensus 7 s~~l~gH~~DVr~v~~~~--~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~ 84 (745)
T KOG0301|consen 7 SHELEGHKSDVRAVAVTD--GVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTII 84 (745)
T ss_pred EEEeccCccchheeEecC--CeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEE
Confidence 367999999999999864 568999999999999997554433 456778888877 88875 455699999999999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D 163 (845)
+|...+..+...+.+|...|+|++...++. +++||.|.++++|-. +++...+.+|+..|++++.-|++ .+++|+.|
T Consensus 85 v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaD 160 (745)
T KOG0301|consen 85 VFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVTGSAD 160 (745)
T ss_pred EEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCCC-cEEeccCc
Confidence 999999999999999999999999888877 999999999999976 56777799999999999999987 78999999
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
.+|++ |.- ++. +.++.+|.+. |
T Consensus 161 KtIkl-------------Wk~--~~~--------------------l~tf~gHtD~-------V---------------- 182 (745)
T KOG0301|consen 161 KTIKL-------------WKG--GTL--------------------LKTFSGHTDC-------V---------------- 182 (745)
T ss_pred ceeee-------------ccC--Cch--------------------hhhhccchhh-------e----------------
Confidence 99999 864 445 7788888887 6
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSS 323 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~ 323 (845)
..+++-++.. +++++.||.|++|++ +++++.+..+|..
T Consensus 183 -----------RgL~vl~~~~------------------------------flScsNDg~Ir~w~~-~ge~l~~~~ghtn 220 (745)
T KOG0301|consen 183 -----------RGLAVLDDSH------------------------------FLSCSNDGSIRLWDL-DGEVLLEMHGHTN 220 (745)
T ss_pred -----------eeeEEecCCC------------------------------eEeecCCceEEEEec-cCceeeeeeccce
Confidence 6666666654 789999999999999 6899999999999
Q ss_pred CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE----EEEEeeCCCC
Q psy467 324 TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQDSG 390 (845)
Q Consensus 324 ~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d~~~ 390 (845)
-|.++...+++..++++++|+ ++||+.. .+.+.+......|+++.+- +|+.++++ |.+|.++...
T Consensus 221 ~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k~R 291 (745)
T KOG0301|consen 221 FVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVDKDR 291 (745)
T ss_pred EEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEecccc
Confidence 999999999999999999999 9999976 7788887666799999988 88887777 9999876443
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-23 Score=219.36 Aligned_cols=243 Identities=20% Similarity=0.359 Sum_probs=205.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
.+|.|-.++|+++.|.+ ++..+++++.|+.+++|++...+...++.+|++.|+++.|......+++|+.|.+|++||+.
T Consensus 213 ~tLaGs~g~it~~d~d~-~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~ 291 (459)
T KOG0288|consen 213 STLAGSLGNITSIDFDS-DNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQ 291 (459)
T ss_pred hhhhccCCCcceeeecC-CCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhh
Confidence 56788889999999999 88899999999999999999999999999999999999999877779999999999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
...+.+++- ....+..|..+ ...+++|-.|+.|++||+++..+......+. .|+++..+++|..+.+++.|.++.+
T Consensus 292 k~~C~kt~l-~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~v 367 (459)
T KOG0288|consen 292 KAYCSKTVL-PGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKV 367 (459)
T ss_pred hhheecccc-ccccccceEec--ceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceee
Confidence 988887765 34456666665 5578899999999999999999999988655 8999999999999999999999999
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
.|+++... ..++......
T Consensus 368 -------------iDlRt~eI--------------------~~~~sA~g~k----------------------------- 385 (459)
T KOG0288|consen 368 -------------IDLRTKEI--------------------RQTFSAEGFK----------------------------- 385 (459)
T ss_pred -------------eecccccE--------------------EEEeeccccc-----------------------------
Confidence 99988776 3333321111
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCC--CEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSS--TIR 326 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~--~Vt 326 (845)
.....+.+.|||++. |+++|+.||.|+||++.++++...+..... .|+
T Consensus 386 -------------------------~asDwtrvvfSpd~~-----YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~ 435 (459)
T KOG0288|consen 386 -------------------------CASDWTRVVFSPDGS-----YVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAIT 435 (459)
T ss_pred -------------------------cccccceeEECCCCc-----eeeeccCCCcEEEEEccCceEEEEeccCCCCcceE
Confidence 001134455555555 999999999999999999999988886444 599
Q ss_pred EEEEeCCCCEEEEEeCCC-EEEE
Q psy467 327 RLTFSEGGECLLGGDTEG-LKVY 348 (845)
Q Consensus 327 slafSpdG~~Lasgs~DG-I~IW 348 (845)
+++|+|.|..|++++.++ +.+|
T Consensus 436 s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 436 SLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred EEEEcCCCchhhcccCCcceEec
Confidence 999999999999999999 9998
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.2e-23 Score=229.60 Aligned_cols=277 Identities=22% Similarity=0.331 Sum_probs=232.0
Q ss_pred cCCCcEE---EEEEecCCCCEEEEEeCCCeEEEEECCCCe------eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 13 AHGASVN---CLALGKKSGQVLATGGDDKKVNLWALGKSN------CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 13 gH~~~V~---~LafSp~dg~~LaTgs~DG~I~IWdl~t~~------~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
.|...|. ++..+..++++|+|||.||.|++|++.... .+.+++.|.+.|+.++...+++.|++++.|-+|+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK 98 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVK 98 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEE
Confidence 4555666 677777688999999999999999985322 3677889999999999999999999999999999
Q ss_pred EEECCCC--cEEEEEcCCCCCeEEEEE-ccCCCEEEEEECCCeEEEEECCCC--ceEEEE--------c-CCCCCeEEEE
Q psy467 84 IWNLAVP--TVQRTLNGHKSSITSVDF-HPYGDYLCSGSLDSFIKLWDLRRK--GCIYTY--------R-GHSKSINSIR 149 (845)
Q Consensus 84 VWDl~tg--~~v~~l~~h~~~V~~laf-spdg~~Lasgs~DG~I~IWDl~t~--~~l~~~--------~-~h~~~V~sLa 149 (845)
+|+...+ -+..++..|...|.|+++ .++...+|+|+.|+.|.+||++++ +.+.++ . ++...|.+++
T Consensus 99 ~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA 178 (735)
T KOG0308|consen 99 VWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLA 178 (735)
T ss_pred EeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeee
Confidence 9999877 567788889999999999 778889999999999999999977 222222 2 6778899999
Q ss_pred EecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEee
Q psy467 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229 (845)
Q Consensus 150 fSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~ 229 (845)
..+.|..+++|+..+.+++ ||.++++. +..+.+|... |
T Consensus 179 ~N~t~t~ivsGgtek~lr~-------------wDprt~~k--------------------imkLrGHTdN-------V-- 216 (735)
T KOG0308|consen 179 MNQTGTIIVSGGTEKDLRL-------------WDPRTCKK--------------------IMKLRGHTDN-------V-- 216 (735)
T ss_pred cCCcceEEEecCcccceEE-------------eccccccc--------------------eeeeeccccc-------e--
Confidence 9999999999999999999 99999998 7788899888 7
Q ss_pred ecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC
Q psy467 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 230 i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl 309 (845)
..+..+.+|. .++++++||+|++||+
T Consensus 217 -------------------------r~ll~~dDGt-----------------------------~~ls~sSDgtIrlWdL 242 (735)
T KOG0308|consen 217 -------------------------RVLLVNDDGT-----------------------------RLLSASSDGTIRLWDL 242 (735)
T ss_pred -------------------------EEEEEcCCCC-----------------------------eEeecCCCceEEeeec
Confidence 7788888887 8999999999999999
Q ss_pred CCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc--CCc-eEEEE---EE
Q psy467 310 EKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT--GTQ-LWFRR---VG 382 (845)
Q Consensus 310 ~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS--dg~-lLaaS---Vs 382 (845)
...+|+.++..|...|+++..+|+=..+++|+.|+ |..=|+.+......+-....+|..+..+ +.. ++++. |.
T Consensus 243 gqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~ 322 (735)
T KOG0308|consen 243 GQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIK 322 (735)
T ss_pred cccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccce
Confidence 99999999999999999999999999999999999 8888888743333333345667777776 444 33333 56
Q ss_pred EEe
Q psy467 383 TWS 385 (845)
Q Consensus 383 iW~ 385 (845)
-|.
T Consensus 323 rW~ 325 (735)
T KOG0308|consen 323 RWK 325 (735)
T ss_pred ecC
Confidence 664
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-22 Score=216.93 Aligned_cols=280 Identities=20% Similarity=0.259 Sum_probs=215.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe----eEEEec-CCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN----CIMSLS-GHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~----~i~~l~-~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
..|.+|+..|.++++.| .|-.|++|+.|..|++||+.... ..+.+. .....|++++|++.|..|++.+.....+
T Consensus 161 i~l~hgtk~Vsal~~Dp-~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqak 239 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDP-SGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAK 239 (641)
T ss_pred EeccCCceEEEEeeecC-CCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCccee
Confidence 36889999999999999 99999999999999999986532 223332 3466899999999999999998899999
Q ss_pred EEECCCCcEEEEE------------cCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCc-eEEEEc-----CCCCC
Q psy467 84 IWNLAVPTVQRTL------------NGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKG-CIYTYR-----GHSKS 144 (845)
Q Consensus 84 VWDl~tg~~v~~l------------~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~-~l~~~~-----~h~~~ 144 (845)
|+|-+....+... ++|...++|.+|+|+. ..|++++.||++++||+...+ .+..++ +..-.
T Consensus 240 l~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~ 319 (641)
T KOG0772|consen 240 LLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVP 319 (641)
T ss_pred EEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccC
Confidence 9998754433322 4788899999999976 578999999999999997543 333332 23457
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 145 INSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
++.++|++||++||+|+.||.|.+ |+..+...... +..-..|..+
T Consensus 320 ~tsC~~nrdg~~iAagc~DGSIQ~-------------W~~~~~~v~p~-----------------~~vk~AH~~g----- 364 (641)
T KOG0772|consen 320 VTSCAWNRDGKLIAAGCLDGSIQI-------------WDKGSRTVRPV-----------------MKVKDAHLPG----- 364 (641)
T ss_pred ceeeecCCCcchhhhcccCCceee-------------eecCCcccccc-----------------eEeeeccCCC-----
Confidence 889999999999999999999999 99754332000 1112222221
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
..|++++||+||+ +|++-+.|+++
T Consensus 365 ---------------------------------------------------~~Itsi~FS~dg~-----~LlSRg~D~tL 388 (641)
T KOG0772|consen 365 ---------------------------------------------------QDITSISFSYDGN-----YLLSRGFDDTL 388 (641)
T ss_pred ---------------------------------------------------CceeEEEeccccc-----hhhhccCCCce
Confidence 2456666666666 99999999999
Q ss_pred EEEECCCC-eEEEEecCC--CCCEEEEEEeCCCCEEEEEeC------CC-EEEEEecCCceEEEecCCCCCeEEEEEc--
Q psy467 305 NFWDLEKF-SLVSTTEKN--SSTIRRLTFSEGGECLLGGDT------EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-- 372 (845)
Q Consensus 305 ~IWDl~s~-~~l~tl~gh--~~~VtslafSpdG~~Lasgs~------DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-- 372 (845)
++||++.. +++.+..+- .-+-+.++|||+.++|++|+. -| +.+||..+-..+..+.-....|..+.|+
T Consensus 389 KvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~Whpk 468 (641)
T KOG0772|consen 389 KVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPK 468 (641)
T ss_pred eeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecch
Confidence 99999875 456555542 335688999999999999864 34 8999998888888888788889999999
Q ss_pred CCceEEEE
Q psy467 373 GTQLWFRR 380 (845)
Q Consensus 373 dg~lLaaS 380 (845)
=+++++.+
T Consensus 469 LNQi~~gs 476 (641)
T KOG0772|consen 469 LNQIFAGS 476 (641)
T ss_pred hhheeeec
Confidence 56766666
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.6e-22 Score=213.69 Aligned_cols=252 Identities=21% Similarity=0.389 Sum_probs=209.8
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe----------eEEEecCCCCCeEEEEEcCC-CCEEEE
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN----------CIMSLSGHSTPVESVQFGNG-EETLSA 75 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~----------~i~~l~~h~~~V~sLafSpd-g~~LaS 75 (845)
++....-|.+.|+.+.+-|++..++|+.+..+.|.|||..+.. +-.++.+|...-++++|++. .-.|++
T Consensus 116 ~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls 195 (422)
T KOG0264|consen 116 EISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLS 195 (422)
T ss_pred EEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEee
Confidence 4445556999999999999999999999999999999985321 22378899988889999984 457899
Q ss_pred EECCCcEEEEECCCCc-------EEEEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECC--CCceEEEEcCCCCCe
Q psy467 76 GCQSGSIKIWNLAVPT-------VQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLR--RKGCIYTYRGHSKSI 145 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~-------~v~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~--t~~~l~~~~~h~~~V 145 (845)
++.|++|++||+.... ....+.+|...|..++|++- ...|++++.|+.+.|||++ +.++.....+|.+.|
T Consensus 196 ~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~v 275 (422)
T KOG0264|consen 196 GSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEV 275 (422)
T ss_pred ccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCce
Confidence 9999999999997542 34567899999999999994 5688999999999999999 556667778899999
Q ss_pred EEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 146 NSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
+|++|+| ++..||+|+.|++|.+ ||+++... .+.++.+|...
T Consensus 276 n~~~fnp~~~~ilAT~S~D~tV~L-------------wDlRnL~~-------------------~lh~~e~H~de----- 318 (422)
T KOG0264|consen 276 NCVAFNPFNEFILATGSADKTVAL-------------WDLRNLNK-------------------PLHTFEGHEDE----- 318 (422)
T ss_pred eEEEeCCCCCceEEeccCCCcEEE-------------eechhccc-------------------CceeccCCCcc-----
Confidence 9999999 6677999999999999 99997654 17788888887
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
| .++.|+|+.. .+||+++.|+.+
T Consensus 319 --v---------------------------~~V~WSPh~e----------------------------tvLASSg~D~rl 341 (422)
T KOG0264|consen 319 --V---------------------------FQVEWSPHNE----------------------------TVLASSGTDRRL 341 (422)
T ss_pred --e---------------------------EEEEeCCCCC----------------------------ceeEecccCCcE
Confidence 7 7888888766 189999999999
Q ss_pred EEEECCCC--------------eEEEEecCCCCCEEEEEEeCCCCE-EEEEeCCC-EEEEEecC
Q psy467 305 NFWDLEKF--------------SLVSTTEKNSSTIRRLTFSEGGEC-LLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 305 ~IWDl~s~--------------~~l~tl~gh~~~VtslafSpdG~~-Lasgs~DG-I~IWDl~t 352 (845)
.+||+..- +++..-.||...|..+.|+|+..+ |+++++|+ +.||....
T Consensus 342 ~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 342 NVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred EEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 99999642 345666689999999999998765 56778888 99999753
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-21 Score=214.24 Aligned_cols=322 Identities=17% Similarity=0.218 Sum_probs=236.1
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE---EEecCCCCCeEEEEEcCC-----------CCEEEEEECCCcEE
Q psy467 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI---MSLSGHSTPVESVQFGNG-----------EETLSAGCQSGSIK 83 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i---~~l~~h~~~V~sLafSpd-----------g~~LaSgs~DGtV~ 83 (845)
..++.|++ ..+.|.+.-.|..++|||+.+-+.+ ..+-.|...|+.+.--|. ...+++++.|++|+
T Consensus 327 ~IA~~Fde-t~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIR 405 (1080)
T KOG1408|consen 327 AIACQFDE-TTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIR 405 (1080)
T ss_pred eeEEEecC-CCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEE
Confidence 45788998 7788888889999999999765433 334458889988876551 23488999999999
Q ss_pred EEECCCC---cEEEE--E--------------------------------cCCCCCeEEEEEccCCCEEEEEECCCeEEE
Q psy467 84 IWNLAVP---TVQRT--L--------------------------------NGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126 (845)
Q Consensus 84 VWDl~tg---~~v~~--l--------------------------------~~h~~~V~~lafspdg~~Lasgs~DG~I~I 126 (845)
+||++.+ ...+. + -.....+.+++.+|+|++|++|..-|++++
T Consensus 406 lW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrV 485 (1080)
T KOG1408|consen 406 LWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRV 485 (1080)
T ss_pred EeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEE
Confidence 9999752 11110 0 011235899999999999999999999999
Q ss_pred EECCCCceEEEEcCCCCCeEEEEEec---CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC-CCC--CCCCCcc
Q psy467 127 WDLRRKGCIYTYRGHSKSINSIRFSP---DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL-GTP--PPQYTSS 200 (845)
Q Consensus 127 WDl~t~~~l~~~~~h~~~V~sLafSP---dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l-~~~--~~~~i~s 200 (845)
||+..-+....+.+|...|.|+.|+. ..++||+++.|..|++ ||+...-.+ +++ +...+++
T Consensus 486 y~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV-------------~Dv~rny~l~qtld~HSssITs 552 (1080)
T KOG1408|consen 486 YDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHV-------------YDVKRNYDLVQTLDGHSSSITS 552 (1080)
T ss_pred EEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEE-------------EecccccchhhhhcccccceeE
Confidence 99998888888999999999999986 3568999999999999 998754432 222 2345566
Q ss_pred eeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCcee
Q psy467 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTS 280 (845)
Q Consensus 201 vs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~s 280 (845)
+.|..+|-....+..+.+. . + ++... .-..+|.....+........+++
T Consensus 553 vKFa~~gln~~MiscGADk----s--i-----------------mFr~~--------qk~~~g~~f~r~t~t~~ktTlYD 601 (1080)
T KOG1408|consen 553 VKFACNGLNRKMISCGADK----S--I-----------------MFRVN--------QKASSGRLFPRHTQTLSKTTLYD 601 (1080)
T ss_pred EEEeecCCceEEEeccCch----h--h-----------------heehh--------ccccCceeccccccccccceEEE
Confidence 6665555333333222111 0 0 00000 00011111111111122345678
Q ss_pred EEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC---CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceE
Q psy467 281 LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK---NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQY 356 (845)
Q Consensus 281 lafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g---h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l 356 (845)
++..|..+ ++++++.|..|+|||+.+++.++.|++ |.+....+...|.|-|||+...|. +.++|+-+|+++
T Consensus 602 m~Vdp~~k-----~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcv 676 (1080)
T KOG1408|consen 602 MAVDPTSK-----LVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECV 676 (1080)
T ss_pred eeeCCCcc-----eEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhh
Confidence 88888888 999999999999999999999999985 567788899999999999999999 999999999999
Q ss_pred EEecCCCCCeEEEEEc-CCce-EEEE----EEEEeeCCC
Q psy467 357 DAQPMGWGKVQDLAVT-GTQL-WFRR----VGTWSHQDS 389 (845)
Q Consensus 357 ~tl~~h~~~VtsVafS-dg~l-LaaS----VsiW~~d~~ 389 (845)
....+|...|+.+.|+ |-+. |.++ +.+|.+...
T Consensus 677 A~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~~ 715 (1080)
T KOG1408|consen 677 AQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPLT 715 (1080)
T ss_pred hhhcCcchheeeeeecccchhheeecCCceEEEEECchh
Confidence 9999999999999999 6554 4444 999987443
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-20 Score=197.50 Aligned_cols=268 Identities=14% Similarity=0.197 Sum_probs=196.1
Q ss_pred EEeccCCCcEEEEEEecCCCCEE-EEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE-ECCCcEEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVL-ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG-CQSGSIKIWN 86 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~L-aTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg-s~DGtV~VWD 86 (845)
+.+.+|. .+.+++|+| ++..+ ++++.++.|++||..+++....+..+.. +..++|+|+++.++++ +.++.|.+||
T Consensus 25 ~~~~~~~-~~~~l~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d 101 (300)
T TIGR03866 25 RTFPVGQ-RPRGITLSK-DGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVID 101 (300)
T ss_pred EEEECCC-CCCceEECC-CCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEE
Confidence 4555554 478899999 77765 5677889999999999888877765544 5788999999987655 4589999999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC-eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCC
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS-FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDG 164 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG-~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG 164 (845)
+.+++.+..+.. ...+.+++|+|+++++++++.++ .+.+||..+++...... ....+.+++|+|++++|++++ .++
T Consensus 102 ~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~ 179 (300)
T TIGR03866 102 IETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVL-VDQRPRFAEFTADGKELWVSSEIGG 179 (300)
T ss_pred CCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEE-cCCCccEEEECCCCCEEEEEcCCCC
Confidence 999888877763 34468899999999999888765 56788998887766554 234567899999999886554 589
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
.+.+ ||+.+++. +..+..+... +
T Consensus 180 ~v~i-------------~d~~~~~~--------------------~~~~~~~~~~-------~----------------- 202 (300)
T TIGR03866 180 TVSV-------------IDVATRKV--------------------IKKITFEIPG-------V----------------- 202 (300)
T ss_pred EEEE-------------EEcCccee--------------------eeeeeecccc-------c-----------------
Confidence 9999 99998766 3322211110 0
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE-EEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL-TTSSSADRTVNFWDLEKFSLVSTTEKNSS 323 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l-Latgs~DG~I~IWDl~s~~~l~tl~gh~~ 323 (845)
.+.. .....++|+|+++ + +++.+.++.+.+||+.+++.+..+. +..
T Consensus 203 ---------------~~~~------------~~~~~i~~s~dg~-----~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~ 249 (300)
T TIGR03866 203 ---------------HPEA------------VQPVGIKLTKDGK-----TAFVALGPANRVAVVDAKTYEVLDYLL-VGQ 249 (300)
T ss_pred ---------------cccc------------CCccceEECCCCC-----EEEEEcCCCCeEEEEECCCCcEEEEEE-eCC
Confidence 0000 0112345555555 4 4444567789999999988776654 345
Q ss_pred CEEEEEEeCCCCEEEEEe-CCC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 324 TIRRLTFSEGGECLLGGD-TEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 324 ~VtslafSpdG~~Lasgs-~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
.+.+++|+|+|++|++++ .++ |++||+.+++++..+... ...++++++
T Consensus 250 ~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~ 299 (300)
T TIGR03866 250 RVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVR 299 (300)
T ss_pred CcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeC
Confidence 789999999999998875 567 999999999999888754 556888764
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=200.94 Aligned_cols=280 Identities=16% Similarity=0.253 Sum_probs=214.2
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc
Q psy467 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~ 97 (845)
-.|+.|++ .|.+||+|+.||.|.|||..+...-+.+.+|..+|.+++||+||+.|++++.|..|.+||+..|.+++.+.
T Consensus 26 a~~~~Fs~-~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 26 AECCQFSR-WGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred cceEEecc-CcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE
Confidence 78999999 99999999999999999999999889999999999999999999999999999999999999999999987
Q ss_pred CCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEcCC----CCCeEEEEEecCCCEEEEEeCCCcEEEeeee
Q psy467 98 GHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGH----SKSINSIRFSPDGQWIASGGEDGVVRIGASF 172 (845)
Q Consensus 98 ~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~~h----~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~ 172 (845)
..++|+...|+|-. +.+++.-.+..-.+-++..+....--... +..-.+..|.+.|+++++|...|.+.+
T Consensus 105 -f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv---- 179 (405)
T KOG1273|consen 105 -FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLV---- 179 (405)
T ss_pred -ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEE----
Confidence 77899999999954 34444444444555555542211111111 112234468899999999999999999
Q ss_pred ccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC-CCCccceeeEeeecccccccccccchhhhhhccC
Q psy467 173 HLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR-PGGTKAKIDVTRIEENAESEDQAGEEELFATIAN 251 (845)
Q Consensus 173 ~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~-~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~ 251 (845)
+|..+.++ ++.+.-.. .. |
T Consensus 180 ---------~~a~t~e~--------------------vas~rits~~~-------I------------------------ 199 (405)
T KOG1273|consen 180 ---------YDAETLEC--------------------VASFRITSVQA-------I------------------------ 199 (405)
T ss_pred ---------Eecchhee--------------------eeeeeechhee-------e------------------------
Confidence 99998877 44433211 11 2
Q ss_pred CCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-------e--EEEEecC--
Q psy467 252 PCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-------S--LVSTTEK-- 320 (845)
Q Consensus 252 ~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-------~--~l~tl~g-- 320 (845)
..+.++-.|. .|+..+.|..|+.|+++.- + +.+.++.
T Consensus 200 ---K~I~~s~~g~-----------------------------~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvV 247 (405)
T KOG1273|consen 200 ---KQIIVSRKGR-----------------------------FLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVV 247 (405)
T ss_pred ---eEEEEeccCc-----------------------------EEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHH
Confidence 4455555555 8999999999999998631 1 1122221
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC--EEEEEecCCceEEEecCCC-CCeEEEEEcCCceEEEE-----EEEEee-CCCCC
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG--LKVYGWEPARQYDAQPMGW-GKVQDLAVTGTQLWFRR-----VGTWSH-QDSGF 391 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk~l~tl~~h~-~~VtsVafSdg~lLaaS-----VsiW~~-d~~~~ 391 (845)
....-.+++||.+|.|++.++... ++||.-..|.+++.+.|.. ...-++.|+.-+.+.++ |++|.+ ...++
T Consensus 248 Nk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si~sg~v~iw~~~~~enw 327 (405)
T KOG1273|consen 248 NKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASIASGVVYIWAVVQVENW 327 (405)
T ss_pred hhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeeccCCceEEEEeecccch
Confidence 123457899999999999988666 9999999999999999877 56889999976666666 999954 56666
Q ss_pred cccc
Q psy467 392 STLD 395 (845)
Q Consensus 392 ~~~~ 395 (845)
..+.
T Consensus 328 safA 331 (405)
T KOG1273|consen 328 SAFA 331 (405)
T ss_pred hhcC
Confidence 6555
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.9e-20 Score=196.81 Aligned_cols=260 Identities=13% Similarity=0.141 Sum_probs=192.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEE-EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL-SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV 106 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~L-aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~l 106 (845)
++++++++.|+.|++||..+++.+..+..+. .+.+++|+|+++.+ ++++.++.|++||..+++....+..+.. +..+
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~ 78 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELF 78 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEE
Confidence 3678899999999999999999888888654 46789999999976 5666789999999999988877765443 5678
Q ss_pred EEccCCCEEEEE-ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc-EEEeeeeccCCceeEEEEC
Q psy467 107 DFHPYGDYLCSG-SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV-VRIGASFHLTNTSIHVVDL 184 (845)
Q Consensus 107 afspdg~~Lasg-s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~-I~I~~~~~~~~~~I~vWDl 184 (845)
+|+|+++.++++ +.++.|++||+.+.+.+..+.. ...+.+++|+|+|++++++..++. +.+ ||.
T Consensus 79 ~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~-------------~d~ 144 (300)
T TIGR03866 79 ALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHF-------------IDT 144 (300)
T ss_pred EECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEE-------------EeC
Confidence 999999977655 5689999999998887777753 345788999999999998887654 455 787
Q ss_pred CCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCC
Q psy467 185 SLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS 264 (845)
Q Consensus 185 ~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~ 264 (845)
.+++. +........ . ..+
T Consensus 145 ~~~~~--------------------~~~~~~~~~--------~---------------------------~~~------- 162 (300)
T TIGR03866 145 KTYEI--------------------VDNVLVDQR--------P---------------------------RFA------- 162 (300)
T ss_pred CCCeE--------------------EEEEEcCCC--------c---------------------------cEE-------
Confidence 65544 211110000 0 234
Q ss_pred cCCCCcccccccCceeEEEcCCCCcccceEE-EEEeCCCeEEEEECCCCeEEEEecCCC-------CCEEEEEEeCCCCE
Q psy467 265 LNRSGTCVPVSVSRTSLSILPQSPMLCFILT-TSSSADRTVNFWDLEKFSLVSTTEKNS-------STIRRLTFSEGGEC 336 (845)
Q Consensus 265 ~~~~~~~~~~~~~I~slafSPdg~~~~~~lL-atgs~DG~I~IWDl~s~~~l~tl~gh~-------~~VtslafSpdG~~ 336 (845)
+|+|+++ ++ +++..++.|++||+.+++.+..+..+. .....++|+|+|++
T Consensus 163 -----------------~~s~dg~-----~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 220 (300)
T TIGR03866 163 -----------------EFTADGK-----ELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKT 220 (300)
T ss_pred -----------------EECCCCC-----EEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCE
Confidence 4444444 55 455569999999999998877664321 12356889999998
Q ss_pred EEEE-eCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE------EEEEeeCC
Q psy467 337 LLGG-DTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR------VGTWSHQD 388 (845)
Q Consensus 337 Lasg-s~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS------VsiW~~d~ 388 (845)
++++ +.++ +.+||..+++.+..+. +...+.+++|+ +|++|+++ |.+|..+.
T Consensus 221 ~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~ 280 (300)
T TIGR03866 221 AFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAA 280 (300)
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCC
Confidence 6654 3344 9999999988776553 44579999999 88888765 88897654
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-21 Score=198.98 Aligned_cols=279 Identities=19% Similarity=0.261 Sum_probs=207.5
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee-----EEEecCCCCCeEEEEEcCCCCEEEEE-ECC
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC-----IMSLSGHSTPVESVQFGNGEETLSAG-CQS 79 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~-----i~~l~~h~~~V~sLafSpdg~~LaSg-s~D 79 (845)
|.+..|++|.+.|++++|+. +|.+|||++.|++|+||++.+... ++. +-.-+.-+.++|+||-+-++.. -..
T Consensus 77 l~~~~LKgH~~~vt~~~FsS-dGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~-nve~dhpT~V~FapDc~s~vv~~~~g 154 (420)
T KOG2096|consen 77 LNVSVLKGHKKEVTDVAFSS-DGKKLATISGDRSIRLWDVRDFENKEHRCIRQ-NVEYDHPTRVVFAPDCKSVVVSVKRG 154 (420)
T ss_pred hhhhhhhccCCceeeeEEcC-CCceeEEEeCCceEEEEecchhhhhhhhHhhc-cccCCCceEEEECCCcceEEEEEccC
Confidence 45667999999999999999 999999999999999999875321 111 1122356788999987765554 456
Q ss_pred CcEEEEECCC---CcEEEE--------E-cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEE
Q psy467 80 GSIKIWNLAV---PTVQRT--------L-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147 (845)
Q Consensus 80 GtV~VWDl~t---g~~v~~--------l-~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~s 147 (845)
.++++|.+.. |..... | ..|.-.+..+-....+.+|++++.|..|.+|+++ |+.+..+......-..
T Consensus 155 ~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~ 233 (420)
T KOG2096|consen 155 NKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYD 233 (420)
T ss_pred CEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccc
Confidence 6899997743 211111 1 2355567777777788999999999999999998 8999999877777888
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC-----eEEEEecCCCCCcc
Q psy467 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS-----LRKSFTKGRPGGTK 222 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~-----~l~~~~~h~~~~~~ 222 (845)
.+.||+|+++++++-.-.|++ |..--++ +|. .+..+.+|..
T Consensus 234 aavSP~GRFia~~gFTpDVkV-------------wE~~f~k-----------------dG~fqev~rvf~LkGH~s---- 279 (420)
T KOG2096|consen 234 AAVSPDGRFIAVSGFTPDVKV-------------WEPIFTK-----------------DGTFQEVKRVFSLKGHQS---- 279 (420)
T ss_pred eeeCCCCcEEEEecCCCCceE-------------EEEEecc-----------------Ccchhhhhhhheeccchh----
Confidence 999999999999998888999 8653211 111 1223344444
Q ss_pred ceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC
Q psy467 223 AKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR 302 (845)
Q Consensus 223 ~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG 302 (845)
.|..++||++.. .+++.+.||
T Consensus 280 ------------------------------------------------------aV~~~aFsn~S~-----r~vtvSkDG 300 (420)
T KOG2096|consen 280 ------------------------------------------------------AVLAAAFSNSST-----RAVTVSKDG 300 (420)
T ss_pred ------------------------------------------------------heeeeeeCCCcc-----eeEEEecCC
Confidence 444555555555 899999999
Q ss_pred eEEEEECCCC-------eEEEEec----CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEec-CCCCCeEEEE
Q psy467 303 TVNFWDLEKF-------SLVSTTE----KNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQP-MGWGKVQDLA 370 (845)
Q Consensus 303 ~I~IWDl~s~-------~~l~tl~----gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~-~h~~~VtsVa 370 (845)
.++|||++-. +.+.+.. ...+.-..+..||+|+.||.+....+++|..++|+....+. .|...|++++
T Consensus 301 ~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is 380 (420)
T KOG2096|consen 301 KWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDIHSTTISSIS 380 (420)
T ss_pred cEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHhhcCceeeEE
Confidence 9999998532 2222221 11233348999999999998887779999999998887775 4999999999
Q ss_pred Ec-CCceEEEE
Q psy467 371 VT-GTQLWFRR 380 (845)
Q Consensus 371 fS-dg~lLaaS 380 (845)
|+ +|+++++.
T Consensus 381 ~~~~g~~~atc 391 (420)
T KOG2096|consen 381 YSSDGKYIATC 391 (420)
T ss_pred ecCCCcEEeee
Confidence 99 99999988
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-21 Score=210.58 Aligned_cols=243 Identities=25% Similarity=0.425 Sum_probs=203.5
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
++|...|.+++.|+ +|+|||+|+.|..|.||+..+.+.++.+.+|.+.|.+++|-.....|++++.|++|++|+++...
T Consensus 199 ~~h~keil~~avS~-Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s 277 (479)
T KOG0299|consen 199 KGHVKEILTLAVSS-DGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLS 277 (479)
T ss_pred ccccceeEEEEEcC-CCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhH
Confidence 48999999999999 99999999999999999999999999999999999999999988999999999999999999999
Q ss_pred EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeee
Q psy467 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGAS 171 (845)
Q Consensus 92 ~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~ 171 (845)
.+.++.+|...|..|....-++.+-+|+.|+++++|++.. .....+.++.+.+.|++|-. ...+++|+.+|.|.+
T Consensus 278 ~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~sidcv~~In-~~HfvsGSdnG~IaL--- 352 (479)
T KOG0299|consen 278 YVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSIDCVAFIN-DEHFVSGSDNGSIAL--- 352 (479)
T ss_pred HHHHHhCCccceeeechhcccceEEeccccceeEEEeccc-cceeeeeCCCCCeeeEEEec-ccceeeccCCceEEE---
Confidence 9999999999999999888888888888999999999954 34445677888999999985 467999999999999
Q ss_pred eccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccC
Q psy467 172 FHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIAN 251 (845)
Q Consensus 172 ~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~ 251 (845)
|++...++ +.+....... .
T Consensus 353 ----------Ws~~KKkp--------------------lf~~~~AHgv-------~------------------------ 371 (479)
T KOG0299|consen 353 ----------WSLLKKKP--------------------LFTSRLAHGV-------I------------------------ 371 (479)
T ss_pred ----------eeecccCc--------------------eeEeeccccc-------c------------------------
Confidence 99998888 4443221111 0
Q ss_pred CCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC----eEEEEecCCCCCEEE
Q psy467 252 PCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF----SLVSTTEKNSSTIRR 327 (845)
Q Consensus 252 ~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~----~~l~tl~gh~~~Vts 327 (845)
|+. .......+|++++..|... ++++|+.+|.|++|-+..+ .++..+. -.+.|++
T Consensus 372 ---------~~~------~~~~~~~Witsla~i~~sd-----L~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNs 430 (479)
T KOG0299|consen 372 ---------PEL------DPVNGNFWITSLAVIPGSD-----LLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNS 430 (479)
T ss_pred ---------CCc------cccccccceeeeEecccCc-----eEEecCCCCceEEEEecCCccccceeeecc-cccEEEE
Confidence 110 0111225788888888888 9999999999999999877 3444444 4678999
Q ss_pred EEEeCCCCEEEEEeC
Q psy467 328 LTFSEGGECLLGGDT 342 (845)
Q Consensus 328 lafSpdG~~Lasgs~ 342 (845)
++|+++|++|++|..
T Consensus 431 l~f~~sgk~ivagiG 445 (479)
T KOG0299|consen 431 LAFSNSGKRIVAGIG 445 (479)
T ss_pred EEEccCCCEEEEecc
Confidence 999999998777654
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=218.25 Aligned_cols=271 Identities=19% Similarity=0.249 Sum_probs=217.6
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC-eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~-~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg 90 (845)
.+|...-+.++|.| +|.+|.+++.||.|++|+.... +...++..+...|.+++.. +++|++|+.+++|.+|...++
T Consensus 10 yaht~G~t~i~~d~-~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~ 86 (933)
T KOG1274|consen 10 YAHTGGLTLICYDP-DGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSG 86 (933)
T ss_pred hhccCceEEEEEcC-CCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCC
Confidence 47899999999999 9999999999999999997655 4444444477788887764 559999999999999999988
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEee
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~ 170 (845)
+.-..+....-++.+++|+.+|+++|.|+.|-.|++.++.+......+++|.++|.++.|+|.+++||+.+.||.|++
T Consensus 87 ~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~i-- 164 (933)
T KOG1274|consen 87 EEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQI-- 164 (933)
T ss_pred CccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEE--
Confidence 765555556678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhcc
Q psy467 171 SFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250 (845)
Q Consensus 171 ~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~ 250 (845)
||+.++.. ..++.+-...
T Consensus 165 -----------w~~~~~~~--------------------~~tl~~v~k~------------------------------- 182 (933)
T KOG1274|consen 165 -----------WDLQDGIL--------------------SKTLTGVDKD------------------------------- 182 (933)
T ss_pred -----------EEcccchh--------------------hhhcccCCcc-------------------------------
Confidence 99998887 3333221111
Q ss_pred CCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC--CCCCEEEE
Q psy467 251 NPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK--NSSTIRRL 328 (845)
Q Consensus 251 ~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g--h~~~Vtsl 328 (845)
..+.. ...+..++|+|+|. .++..+.|+.|++|+..++.....+.. +...+.++
T Consensus 183 ------n~~~~-------------s~i~~~~aW~Pk~g-----~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~ 238 (933)
T KOG1274|consen 183 ------NEFIL-------------SRICTRLAWHPKGG-----TLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDL 238 (933)
T ss_pred ------ccccc-------------cceeeeeeecCCCC-----eEEeeccCCeEEEEccCCceeheeecccccccceEEE
Confidence 00000 11234455666644 677778899999999999999888874 34459999
Q ss_pred EEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceE
Q psy467 329 TFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLW 377 (845)
Q Consensus 329 afSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lL 377 (845)
.|||+|+|||+++.|| |.|||+++- .+ ......|++++|. +..-|
T Consensus 239 ~wsPnG~YiAAs~~~g~I~vWnv~t~---~~-~~~~~~Vc~~aw~p~~n~i 285 (933)
T KOG1274|consen 239 QWSPNGKYIAASTLDGQILVWNVDTH---ER-HEFKRAVCCEAWKPNANAI 285 (933)
T ss_pred EEcCCCcEEeeeccCCcEEEEecccc---hh-ccccceeEEEecCCCCCee
Confidence 9999999999999999 999999982 11 2334689999999 44433
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.7e-21 Score=205.56 Aligned_cols=275 Identities=14% Similarity=0.214 Sum_probs=226.3
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC--eeEEEecCCCCCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCc
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKS--NCIMSLSGHSTPVESVQFGNGEE-TLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~i~~l~~h~~~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg~ 91 (845)
.+.|++|.|+| +..+|++++.||+++||.++.. ..++.+.-...+|.+.+|.|+|. .+++++....+..||+.+.+
T Consensus 213 ~~~I~sv~FHp-~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak 291 (514)
T KOG2055|consen 213 HGGITSVQFHP-TAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK 291 (514)
T ss_pred cCCceEEEecC-CCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence 46899999999 9999999999999999998543 35666666688999999999999 88999999999999999876
Q ss_pred EEE--EEcCCC-CCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 92 VQR--TLNGHK-SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 92 ~v~--~l~~h~-~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..+ ...++. ..+.....++++++|+..+..|.|.+....+++.+.+++ ..+.|..++|+.|++.|++++.+|.|.+
T Consensus 292 ~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v 370 (514)
T KOG2055|consen 292 VTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYV 370 (514)
T ss_pred cccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEE
Confidence 443 233333 357778899999999999999999999999999999998 6788999999999999999999999999
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||++...+ +..+......
T Consensus 371 -------------~nl~~~~~--------------------~~rf~D~G~v----------------------------- 388 (514)
T KOG2055|consen 371 -------------WNLRQNSC--------------------LHRFVDDGSV----------------------------- 388 (514)
T ss_pred -------------EecCCcce--------------------EEEEeecCcc-----------------------------
Confidence 99998877 5554332111
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC------CeEEEEecCCC
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK------FSLVSTTEKNS 322 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s------~~~l~tl~gh~ 322 (845)
..++++.++++. +||+|+..|.|.|||.++ .+++.++..-.
T Consensus 389 ----~gts~~~S~ng~-----------------------------ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLt 435 (514)
T KOG2055|consen 389 ----HGTSLCISLNGS-----------------------------YLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLT 435 (514)
T ss_pred ----ceeeeeecCCCc-----------------------------eEEeccCcceEEEeccchhhccCCCCchhhhhhhh
Confidence 005566666666 999999999999999754 35677777667
Q ss_pred CCEEEEEEeCCCCEEEEEeCCC---EEEEEecCCceEEEecCCC---CCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 323 STIRRLTFSEGGECLLGGDTEG---LKVYGWEPARQYDAQPMGW---GKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 323 ~~VtslafSpdG~~Lasgs~DG---I~IWDl~tgk~l~tl~~h~---~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
..|+++.|++|++.||.++... +++-.+.+......++... +.|++++|| .+.++|++ |.+|.+
T Consensus 436 t~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL 511 (514)
T KOG2055|consen 436 TAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKL 511 (514)
T ss_pred eeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEee
Confidence 7899999999999999887644 9999998877776665433 679999999 79999999 888864
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=211.51 Aligned_cols=374 Identities=18% Similarity=0.276 Sum_probs=247.1
Q ss_pred eeeEEeccCCCcEEEEEEecCCC--CEEEEEeCCCeEEEEECCCCe---------------------eEEE---------
Q psy467 6 EKAEDFMAHGASVNCLALGKKSG--QVLATGGDDKKVNLWALGKSN---------------------CIMS--------- 53 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg--~~LaTgs~DG~I~IWdl~t~~---------------------~i~~--------- 53 (845)
-.+.++.||.+.|.+++|....+ -+||+++.|..|+||.+.-+. ....
T Consensus 182 ~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ea 261 (764)
T KOG1063|consen 182 ARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEA 261 (764)
T ss_pred eEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhh
Confidence 45678999999999999987433 488899999999999873211 1111
Q ss_pred -ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc--EEEE-----EcCCCCCeEEEEEccCCCEEEEEECCCeEE
Q psy467 54 -LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT--VQRT-----LNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125 (845)
Q Consensus 54 -l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~--~v~~-----l~~h~~~V~~lafspdg~~Lasgs~DG~I~ 125 (845)
+.||.+-|.++.|+|.+..|++++.|.++.+|...+.. -+.. +.+........-|+|+++.+++-+..|..+
T Consensus 262 ll~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~h 341 (764)
T KOG1063|consen 262 LLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFH 341 (764)
T ss_pred hhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEE
Confidence 23899999999999999999999999999999887642 2222 233345578889999999999999999999
Q ss_pred EEECCCC---ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeee-------ccCCceeEEEECCCCccCCCCCC
Q psy467 126 LWDLRRK---GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF-------HLTNTSIHVVDLSLVHPLGTPPP 195 (845)
Q Consensus 126 IWDl~t~---~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~-------~~~~~~I~vWDl~tg~~l~~~~~ 195 (845)
+|...+. .....+.+|.+.|.+++|+|.|.+|++++.|.+-+++..+ .....+++-||+..-..+..
T Consensus 342 lWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~--- 418 (764)
T KOG1063|consen 342 LWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNE--- 418 (764)
T ss_pred EEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccC---
Confidence 9984332 2344567899999999999999999999999999994443 12233444455443332220
Q ss_pred CCCcceeecCCCCeEEEEecCCCC-------------Cc-----cceeeEeeecccccc--cccccchhh--hhhccCCC
Q psy467 196 QYTSSVPFSHNTSLRKSFTKGRPG-------------GT-----KAKIDVTRIEENAES--EDQAGEEEL--FATIANPC 253 (845)
Q Consensus 196 ~~i~svs~spdg~~l~~~~~h~~~-------------~~-----~~~i~V~~i~~~~~~--~~~~~~~~l--~~~~~~~~ 253 (845)
-..+.-..+.+.+..|.....- +. ...+....+...+.. ....+.... ..+.....
T Consensus 419 --~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~ 496 (764)
T KOG1063|consen 419 --DLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAA 496 (764)
T ss_pred --CceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccC
Confidence 0000011122222222111000 00 000000000000000 000000000 00000000
Q ss_pred ceeEEEcCC-CC-------cCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC-----CeEEEEECCCCeEEEEecC
Q psy467 254 DYSAIFQPH-RS-------LNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD-----RTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 254 ~~~l~fspd-g~-------~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D-----G~I~IWDl~s~~~l~tl~g 320 (845)
.+....|. .. |....+...|...|++++.+|+|+ ++|+++.. ..|++|+..++..++.+.+
T Consensus 497 -p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gn-----liASaCKS~~~ehAvI~lw~t~~W~~~~~L~~ 570 (764)
T KOG1063|consen 497 -PCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGN-----LIASACKSSLKEHAVIRLWNTANWLQVQELEG 570 (764)
T ss_pred -chhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCC-----EEeehhhhCCccceEEEEEeccchhhhheecc
Confidence 00011111 00 223345567788999999999999 89998754 3699999999999999999
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce----EEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ----YDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~----l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
|.-.|+.++|||||++|++.+.|. +.+|....... ....+.|..-|++..|+ ++++++++ |.+|.+...
T Consensus 571 HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 571 HSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred cceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 999999999999999999999999 99998765322 23467899999999999 88877777 999987655
Q ss_pred C
Q psy467 390 G 390 (845)
Q Consensus 390 ~ 390 (845)
.
T Consensus 651 ~ 651 (764)
T KOG1063|consen 651 R 651 (764)
T ss_pred h
Confidence 3
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-20 Score=202.22 Aligned_cols=247 Identities=21% Similarity=0.307 Sum_probs=205.5
Q ss_pred CEEEEEe-CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Q psy467 29 QVLATGG-DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVD 107 (845)
Q Consensus 29 ~~LaTgs-~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~la 107 (845)
.+++++. ....|.+|.+..........--.++|.|++-+|+|.+|+.|+-.|.|++|.+.+|..+..+..|-..|+|+.
T Consensus 51 ~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~ 130 (476)
T KOG0646|consen 51 EYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLK 130 (476)
T ss_pred hheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEE
Confidence 3555543 334788998866555443334567899999999999999999999999999999999999999999999999
Q ss_pred EccCCCEEEEEECCCeEEEEECC---------CCceEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCC
Q psy467 108 FHPYGDYLCSGSLDSFIKLWDLR---------RKGCIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTN 176 (845)
Q Consensus 108 fspdg~~Lasgs~DG~I~IWDl~---------t~~~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~ 176 (845)
|+.||.+|++|+.||.|.+|++. +-++++.+..|.-+|+++...+. ..++++++.|.++++
T Consensus 131 fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~-------- 202 (476)
T KOG0646|consen 131 FSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKL-------- 202 (476)
T ss_pred EeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEE--------
Confidence 99999999999999999999873 34578889999999999998874 357999999999999
Q ss_pred ceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCcee
Q psy467 177 TSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYS 256 (845)
Q Consensus 177 ~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (845)
||+..+.. +.++.-... + .+
T Consensus 203 -----wdlS~g~L--------------------Llti~fp~s--------i---------------------------~a 222 (476)
T KOG0646|consen 203 -----WDLSLGVL--------------------LLTITFPSS--------I---------------------------KA 222 (476)
T ss_pred -----EEecccee--------------------eEEEecCCc--------c---------------------------ee
Confidence 99998887 544432221 2 56
Q ss_pred EEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC----------------eEEEEecC
Q psy467 257 AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF----------------SLVSTTEK 320 (845)
Q Consensus 257 l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~----------------~~l~tl~g 320 (845)
++.+|.+. .+.+|+.+|.|.+.++.+. ..+..+.|
T Consensus 223 v~lDpae~-----------------------------~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~G 273 (476)
T KOG0646|consen 223 VALDPAER-----------------------------VVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVG 273 (476)
T ss_pred EEEccccc-----------------------------EEEecCCcceEEeeehhcCCcccccccccccccccceeeeecc
Confidence 66666666 8999999999998887542 34566778
Q ss_pred CCC--CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 321 NSS--TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 321 h~~--~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
|.+ .|+|++++-||..|++|+.|| |+|||+.+.++++++....++|+.+.+.
T Consensus 274 h~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~ 328 (476)
T KOG0646|consen 274 HENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQIN 328 (476)
T ss_pred ccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEee
Confidence 877 999999999999999999999 9999999999999988788999999884
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=211.72 Aligned_cols=244 Identities=23% Similarity=0.382 Sum_probs=208.7
Q ss_pred cceeeee--------EEeccCCCcEEE-EEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCE
Q psy467 2 RAKVEKA--------EDFMAHGASVNC-LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72 (845)
Q Consensus 2 ~irlw~l--------~~L~gH~~~V~~-LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~ 72 (845)
++++|.- +.+.+|.+-|.+ +++-+.++-.+++|+.|+.|.+|......++..+.+|...|.|+....++.
T Consensus 36 t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~- 114 (745)
T KOG0301|consen 36 TVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT- 114 (745)
T ss_pred ceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-
Confidence 3567764 568889998888 888764556799999999999999999999999999999999999887777
Q ss_pred EEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 73 LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
+++||.|.++++|... ++...+.+|...|+++++-|++ .++||+.|.+|++|.- +++++++.+|...|+++++-+
T Consensus 115 ~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~ 189 (745)
T KOG0301|consen 115 LISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLD 189 (745)
T ss_pred eEecccccceEEecch--hhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEec
Confidence 9999999999999874 5666799999999999999988 8899999999999975 789999999999999999997
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++ .|++++.||.|++ |++ +|.. +....+|... +
T Consensus 190 ~~-~flScsNDg~Ir~-------------w~~-~ge~--------------------l~~~~ghtn~-------v----- 222 (745)
T KOG0301|consen 190 DS-HFLSCSNDGSIRL-------------WDL-DGEV--------------------LLEMHGHTNF-------V----- 222 (745)
T ss_pred CC-CeEeecCCceEEE-------------Eec-cCce--------------------eeeeeccceE-------E-----
Confidence 64 4889999999999 999 5666 6777788776 6
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
+++....++. .+++++.|++++||+..
T Consensus 223 ----------------------Ysis~~~~~~-----------------------------~Ivs~gEDrtlriW~~~-- 249 (745)
T KOG0301|consen 223 ----------------------YSISMALSDG-----------------------------LIVSTGEDRTLRIWKKD-- 249 (745)
T ss_pred ----------------------EEEEecCCCC-----------------------------eEEEecCCceEEEeecC--
Confidence 5666555555 89999999999999977
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
++.+.+.-....|+++.+-++|. |++|+.|| |+||..+.
T Consensus 250 e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 250 ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDK 289 (745)
T ss_pred ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence 77777775566899999988887 56777888 99998763
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-20 Score=190.77 Aligned_cols=257 Identities=18% Similarity=0.267 Sum_probs=206.9
Q ss_pred EEEEeCCCeEEEEECCC------------CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC
Q psy467 31 LATGGDDKKVNLWALGK------------SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 31 LaTgs~DG~I~IWdl~t------------~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~ 98 (845)
+++|+....|.=+++.- ...+..+..|.+.|++++.+ +.++|+|+.|-+|+|||+.....+..+-.
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~ 81 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLS 81 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceec
Confidence 55666665555554421 12355667899999999986 78999999999999999999999999988
Q ss_pred CCCCeEEEEEccCCC--EEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCC
Q psy467 99 HKSSITSVDFHPYGD--YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN 176 (845)
Q Consensus 99 h~~~V~~lafspdg~--~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~ 176 (845)
|.+.|+++.|.++-. .|++|+.||.|.+|+.....++.++++|.+.|+.++++|.|++.++.+.|+.++.
T Consensus 82 HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~-------- 153 (362)
T KOG0294|consen 82 HAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRT-------- 153 (362)
T ss_pred cccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeee--------
Confidence 999999999999764 8999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCcee
Q psy467 177 TSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYS 256 (845)
Q Consensus 177 ~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (845)
||+-.|+. -....-.... ..
T Consensus 154 -----WNLV~Gr~--------------------a~v~~L~~~a-----------------------------------t~ 173 (362)
T KOG0294|consen 154 -----WNLVRGRV--------------------AFVLNLKNKA-----------------------------------TL 173 (362)
T ss_pred -----ehhhcCcc--------------------ceeeccCCcc-----------------------------------ee
Confidence 99988776 2222211111 44
Q ss_pred EEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCE
Q psy467 257 AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGEC 336 (845)
Q Consensus 257 l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~ 336 (845)
+.|+|.|. +++.++.+ .|-+|.+.+.+....+.. ...+.|+.|- ++..
T Consensus 174 v~w~~~Gd-----------------------------~F~v~~~~-~i~i~q~d~A~v~~~i~~-~~r~l~~~~l-~~~~ 221 (362)
T KOG0294|consen 174 VSWSPQGD-----------------------------HFVVSGRN-KIDIYQLDNASVFREIEN-PKRILCATFL-DGSE 221 (362)
T ss_pred eEEcCCCC-----------------------------EEEEEecc-EEEEEecccHhHhhhhhc-cccceeeeec-CCce
Confidence 66666666 77777655 689999988776655543 2446666665 5678
Q ss_pred EEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc---CCceEEEE-----EEEEeeCCC
Q psy467 337 LLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT---GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 337 Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS---dg~lLaaS-----VsiW~~d~~ 389 (845)
|++|++|+ |.+||.+...++..+.+|...|-++.+- ++.+|++. +.+|.++..
T Consensus 222 L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 222 LLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred EEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 89999999 9999999999999999999999999965 45666555 999988765
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=8e-21 Score=196.40 Aligned_cols=252 Identities=21% Similarity=0.362 Sum_probs=201.6
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE---EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI---MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i---~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
+++|..|.+.|+++.|+| ...+|++|+.|++|++||....... +.++ ...+|.++.|+|.|.+|+.|..-.++++
T Consensus 165 IRTlYDH~devn~l~FHP-re~ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~rl 242 (430)
T KOG0640|consen 165 IRTLYDHVDEVNDLDFHP-RETILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLRL 242 (430)
T ss_pred EeehhhccCcccceeecc-hhheEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCCceeE
Confidence 678999999999999999 8899999999999999999654332 2233 5678999999999999999999999999
Q ss_pred EECCCCcEEEEE---cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-CC-CCeEEEEEecCCCEEEE
Q psy467 85 WNLAVPTVQRTL---NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HS-KSINSIRFSPDGQWIAS 159 (845)
Q Consensus 85 WDl~tg~~v~~l---~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~-~~V~sLafSPdg~~Las 159 (845)
||+++.++...- ..|.+.|+++.+++.++..++++.||.|++||=-+++|+.++.. |. ..|.+..|..+|+++++
T Consensus 243 Ydv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLs 322 (430)
T KOG0640|consen 243 YDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILS 322 (430)
T ss_pred EeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEee
Confidence 999998776554 35889999999999999999999999999999999999988853 43 47899999999999999
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
.+.|..+++ |.+.++.. +..+.+.... +....
T Consensus 323 SG~DS~vkL-------------WEi~t~R~--------------------l~~YtGAg~t---grq~~------------ 354 (430)
T KOG0640|consen 323 SGKDSTVKL-------------WEISTGRM--------------------LKEYTGAGTT---GRQKH------------ 354 (430)
T ss_pred cCCcceeee-------------eeecCCce--------------------EEEEecCCcc---cchhh------------
Confidence 999999999 99999998 6655543211 00000
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~ 319 (845)
.+...|+.... ..+.|| -..+.+.-||.++...+..+.
T Consensus 355 --------------rtqAvFNhtEd----------------yVl~pD------------Eas~slcsWdaRtadr~~l~s 392 (430)
T KOG0640|consen 355 --------------RTQAVFNHTED----------------YVLFPD------------EASNSLCSWDARTADRVALLS 392 (430)
T ss_pred --------------hhhhhhcCccc----------------eEEccc------------cccCceeeccccchhhhhhcc
Confidence 02233333332 111222 234678899999887665554
Q ss_pred -CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 320 -KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 320 -gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
+|++.+..+.-||.+..+.+++.|- +++|--.
T Consensus 393 lgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 393 LGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred cCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence 7999999999999999999999999 9999643
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-21 Score=195.35 Aligned_cols=248 Identities=19% Similarity=0.278 Sum_probs=203.7
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
+-+|.||.+.|++.+++. +....|+++.|=+-+|||.-+|..++.+. |..-|.+++|+.|.++|++|+.+..++|+|+
T Consensus 52 igtfeghkgavw~~~l~~-na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdl 129 (334)
T KOG0278|consen 52 IGTFEGHKGAVWSATLNK-NATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDL 129 (334)
T ss_pred EEeeeccCcceeeeecCc-hhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhc
Confidence 468999999999999988 88889999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCC-cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 88 AVP-TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 88 ~tg-~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
+.. .+...+.+|.+.|..+-|....+.|++++.|++|++||.+++..++++. ...+|+++.++++|++|.++ ..+.|
T Consensus 130 n~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia-~gssV 207 (334)
T KOG0278|consen 130 NRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIA-YGSSV 207 (334)
T ss_pred cCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEe-cCcee
Confidence 875 4567788999999999999999999999999999999999999999987 67789999999999977665 45678
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
.+ ||..+...+.... +-.+.+.+++|+...... +.... . +
T Consensus 208 ~F-------------wdaksf~~lKs~k~P~nV~SASL~P~k~~fVa--Gged~----~--~------------------ 248 (334)
T KOG0278|consen 208 KF-------------WDAKSFGLLKSYKMPCNVESASLHPKKEFFVA--GGEDF----K--V------------------ 248 (334)
T ss_pred EE-------------eccccccceeeccCccccccccccCCCceEEe--cCcce----E--E------------------
Confidence 99 9999988877765 777888888888743322 22211 0 2
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
..+.|..... .......+.++|.++.|+|||. +.++|+.||+|++|.+..++.
T Consensus 249 ---------~kfDy~TgeE--i~~~nkgh~gpVhcVrFSPdGE-----~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 249 ---------YKFDYNTGEE--IGSYNKGHFGPVHCVRFSPDGE-----LYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred ---------EEEeccCCce--eeecccCCCCceEEEEECCCCc-----eeeccCCCceEEEEEecCCCc
Confidence 1122222111 0111245678999999999999 999999999999999876543
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-19 Score=199.44 Aligned_cols=284 Identities=20% Similarity=0.288 Sum_probs=223.4
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-eEEEecCC-CCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-CIMSLSGH-STPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-~i~~l~~h-~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
+.+++.+.--...|.||||+. ..+.||.+-.+|.|.||++...= +...+.++ ...|.+++|+ ++..|++.+.+|.|
T Consensus 15 vhrcrf~d~~Ps~I~slA~s~-kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i 92 (691)
T KOG2048|consen 15 VHRCRFVDYKPSEIVSLAYSH-KSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSI 92 (691)
T ss_pred EEEEEEEeeeccceEEEEEec-cCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceE
Confidence 445566666788999999999 66779999999999999997643 33445544 6689999999 45677888899999
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE--EcCCCCCeEEEEEecCCCEEEEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT--YRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~--~~~h~~~V~sLafSPdg~~Lasg 160 (845)
.-||+.++++...+....+.|++++.+|.+..++.|+.||.+..++...+..... +....+.+.+++|+|++..++.|
T Consensus 93 ~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~G 172 (691)
T KOG2048|consen 93 TEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGG 172 (691)
T ss_pred EEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEec
Confidence 9999999999999998999999999999999999999999888888877665433 33456889999999999999999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcc-ceeeEeeeccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTK-AKIDVTRIEENAESEDQ 239 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~-~~i~V~~i~~~~~~~~~ 239 (845)
+.||.|++ ||..++.. +............ ...-|
T Consensus 173 s~Dg~Iri-------------wd~~~~~t--------------------~~~~~~~~d~l~k~~~~iV------------ 207 (691)
T KOG2048|consen 173 SIDGVIRI-------------WDVKSGQT--------------------LHIITMQLDRLSKREPTIV------------ 207 (691)
T ss_pred ccCceEEE-------------EEcCCCce--------------------EEEeeecccccccCCceEE------------
Confidence 99999999 99998887 3322221111000 01112
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~ 319 (845)
+++.+- .++ .+++|.+.|.|.+||...+.+++.+.
T Consensus 208 ---------------WSv~~L------------------------rd~------tI~sgDS~G~V~FWd~~~gTLiqS~~ 242 (691)
T KOG2048|consen 208 ---------------WSVLFL------------------------RDS------TIASGDSAGTVTFWDSIFGTLIQSHS 242 (691)
T ss_pred ---------------EEEEEe------------------------ecC------cEEEecCCceEEEEcccCcchhhhhh
Confidence 333333 333 59999999999999999999999999
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce----EEEecCCCCCeEEEEEcCCceEEEE
Q psy467 320 KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ----YDAQPMGWGKVQDLAVTGTQLWFRR 380 (845)
Q Consensus 320 gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~----l~tl~~h~~~VtsVafSdg~lLaaS 380 (845)
.|...|.+++.++++..+++++.|+ |.-|...+++. ......|...|++++..+..++..+
T Consensus 243 ~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~~l~sgG 308 (691)
T KOG2048|consen 243 CHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIENALISGG 308 (691)
T ss_pred hhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecceEEecc
Confidence 9999999999999999999999999 66666666532 2334568889999998865444444
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.1e-22 Score=223.15 Aligned_cols=252 Identities=23% Similarity=0.388 Sum_probs=224.8
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV 106 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~l 106 (845)
.+.+++.+..+-.+++|+... +..|...|.|+..-..++.+++|+.|..+-+|.+.....+..+.+|..+|.++
T Consensus 3 ~~~~~m~~~~~t~Lr~~~~~~------~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl 76 (825)
T KOG0267|consen 3 GMEFLMKTKRATKLRVWDTRE------FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESL 76 (825)
T ss_pred cccccceeeeeeccccccchh------hhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceee
Confidence 344455555666788888543 44588889999887788999999999999999998888888899999999999
Q ss_pred EEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCC
Q psy467 107 DFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL 186 (845)
Q Consensus 107 afspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t 186 (845)
.|+++..+|++|+.+|+|++||++.++.++++.+|...+.++.|+|-+.+++.|+.|+.+.+ ||.+.
T Consensus 77 ~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~i-------------wD~Rk 143 (825)
T KOG0267|consen 77 TFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKI-------------WDIRK 143 (825)
T ss_pred ecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEecccccccccee-------------hhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999 99997
Q ss_pred CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcC
Q psy467 187 VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN 266 (845)
Q Consensus 187 g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~ 266 (845)
..+ ...+.+|... + ..+.|+|+|.
T Consensus 144 ~Gc--------------------~~~~~s~~~v-------v---------------------------~~l~lsP~Gr-- 167 (825)
T KOG0267|consen 144 KGC--------------------SHTYKSHTRV-------V---------------------------DVLRLSPDGR-- 167 (825)
T ss_pred cCc--------------------eeeecCCcce-------e---------------------------EEEeecCCCc--
Confidence 777 6777776655 5 6677777777
Q ss_pred CCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-E
Q psy467 267 RSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-L 345 (845)
Q Consensus 267 ~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I 345 (845)
+++.|+.|..++|||+..|+....|..|.+.+.++.|+|..-++++|+.|+ +
T Consensus 168 ---------------------------~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv 220 (825)
T KOG0267|consen 168 ---------------------------WVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTV 220 (825)
T ss_pred ---------------------------eeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCcee
Confidence 999999999999999999999999999999999999999999999999999 9
Q ss_pred EEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 346 KVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 346 ~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
++||+++-+.+.........|.+.+|+ +++.+..+
T Consensus 221 ~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G 256 (825)
T KOG0267|consen 221 RFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSG 256 (825)
T ss_pred eeeccceeEEeeccCCccCCceeeeecCCceeeecC
Confidence 999999999888888889999999999 88888777
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=203.18 Aligned_cols=257 Identities=19% Similarity=0.252 Sum_probs=199.7
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC-----
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA----- 88 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~----- 88 (845)
-.+.|.|++-+| +|.+|+.|+..|.|++|.+.+|..+..+..|-..|+|+.|+.||.+|++|+.||.|.+|.+-
T Consensus 80 ~Pg~v~al~s~n-~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a 158 (476)
T KOG0646|consen 80 LPGPVHALASSN-LGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSA 158 (476)
T ss_pred cccceeeeecCC-CceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccc
Confidence 467899999999 99999999899999999999999999999999999999999999999999999999999873
Q ss_pred ----CCcEEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC
Q psy467 89 ----VPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 89 ----tg~~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
+-++.+.+..|.-+|+++...+. ..++++++.|.++++||+..+..+.++. ....+.+++.+|.++.+++|+.
T Consensus 159 ~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~ 237 (476)
T KOG0646|consen 159 DNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTE 237 (476)
T ss_pred ccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCC
Confidence 34677889999999999988765 3689999999999999999999888886 6778999999999999999999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
+|.|.+ .++...... ...+..=..+..+..+..+.+|...
T Consensus 238 ~G~I~~-------------~~~~~~~~~----~~~v~~k~~~~~~t~~~~~~Gh~~~----------------------- 277 (476)
T KOG0646|consen 238 EGKIFQ-------------NLLFKLSGQ----SAGVNQKGRHEENTQINVLVGHENE----------------------- 277 (476)
T ss_pred cceEEe-------------eehhcCCcc----cccccccccccccceeeeeccccCC-----------------------
Confidence 999999 444322110 0000011112222223333333321
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
..|+|++++-||. +|++|+.||.|.|||+.+.++++++....
T Consensus 278 ---------------------------------~~ITcLais~Dgt-----lLlSGd~dg~VcvWdi~S~Q~iRtl~~~k 319 (476)
T KOG0646|consen 278 ---------------------------------SAITCLAISTDGT-----LLLSGDEDGKVCVWDIYSKQCIRTLQTSK 319 (476)
T ss_pred ---------------------------------cceeEEEEecCcc-----EEEeeCCCCCEEEEecchHHHHHHHhhhc
Confidence 2456666666665 99999999999999999999999988668
Q ss_pred CCEEEEEEeCCCCEEEEEeCCC--EEEEEe
Q psy467 323 STIRRLTFSEGGECLLGGDTEG--LKVYGW 350 (845)
Q Consensus 323 ~~VtslafSpdG~~Lasgs~DG--I~IWDl 350 (845)
++|+.+.+.|--+-...+.... +-.|++
T Consensus 320 gpVtnL~i~~~~~~~~l~~~~~ps~~~~~l 349 (476)
T KOG0646|consen 320 GPVTNLQINPLERGIILFEHKQPSLPNPHL 349 (476)
T ss_pred cccceeEeeccccceecccccCccCCchHh
Confidence 8999999977533333333222 444444
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=203.11 Aligned_cols=278 Identities=20% Similarity=0.291 Sum_probs=220.3
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC---eeEEEec--CCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS---NCIMSLS--GHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~---~~i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.|..-|.+++.|. ..+.+.||+. |-|+|||+... ..+..+. .....|.++...|||+.|++|+.-.++.|||+
T Consensus 417 ~HGEvVcAvtIS~-~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL 494 (705)
T KOG0639|consen 417 AHGEVVCAVTISN-PTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL 494 (705)
T ss_pred ccCcEEEEEEecC-CcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence 5889999999987 7788999875 68999999543 2333333 24678999999999999999999999999999
Q ss_pred CCCcEE--EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 88 AVPTVQ--RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 88 ~tg~~v--~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
...... ..+......+.+++.+||.+..++++.||.|.|||+.+...++.|.+|...+.||.+++||..|.+|+-|++
T Consensus 495 AapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDnt 574 (705)
T KOG0639|consen 495 AAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNT 574 (705)
T ss_pred cCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccc
Confidence 876443 333333346778999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
|+. ||++.+..+.... ..+|.++..+|++..++.-.... . ++.+.
T Consensus 575 vRc-------------WDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens-~-------vevlh------------- 620 (705)
T KOG0639|consen 575 VRC-------------WDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENS-N-------VEVLH------------- 620 (705)
T ss_pred eee-------------hhhhhhhhhhhhhhhhhheecccCCCccceeeecccC-c-------EEEEe-------------
Confidence 999 9999998866554 67888899999998877532211 1 21111
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~ 324 (845)
..+. ..-....+..-|.++.|++.|+ ++++.+.|+.+..|.+.-|..+..... .+.
T Consensus 621 ----------------~skp--~kyqlhlheScVLSlKFa~cGk-----wfvStGkDnlLnawrtPyGasiFqskE-~Ss 676 (705)
T KOG0639|consen 621 ----------------TSKP--EKYQLHLHESCVLSLKFAYCGK-----WFVSTGKDNLLNAWRTPYGASIFQSKE-SSS 676 (705)
T ss_pred ----------------cCCc--cceeecccccEEEEEEecccCc-----eeeecCchhhhhhccCccccceeeccc-cCc
Confidence 1110 0011122344567788888888 899999999999999998888777764 678
Q ss_pred EEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 325 IRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 325 VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
|.++.+|.|.++|++|+.|. -.||.+
T Consensus 677 VlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 677 VLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ceeeeeccCceEEEecCCCcceEEEEE
Confidence 99999999999999999997 777764
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.4e-19 Score=200.75 Aligned_cols=350 Identities=14% Similarity=0.227 Sum_probs=243.9
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc
Q psy467 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~ 97 (845)
|+++.--+.--+.++.|+.+|.+.||++.+++.+.+++++...|+++.=+|--+.+|.|..+|+|.+++++.++.+.+|+
T Consensus 162 Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk 241 (910)
T KOG1539|consen 162 ITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFK 241 (910)
T ss_pred eeeEecchhheeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEE
Confidence 77776533334678899999999999999999999999999999999999988999999999999999999999999999
Q ss_pred CCCCCeEEEEEccCCCE-EEEEECCCeEEEEECCCCceEEEEc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccC
Q psy467 98 GHKSSITSVDFHPYGDY-LCSGSLDSFIKLWDLRRKGCIYTYR-GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLT 175 (845)
Q Consensus 98 ~h~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~t~~~l~~~~-~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~ 175 (845)
...+.|+.++|..||+. +++|+..|.+.+||++..+.+.... .|.+.|....|.|....+++++.|+.+++|
T Consensus 242 ~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~------ 315 (910)
T KOG1539|consen 242 QDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVW------ 315 (910)
T ss_pred ccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEE------
Confidence 44599999999999974 5677777999999999888776665 688999999999999999999999999982
Q ss_pred CceeEEEECCCCcc--CC--CCCCCCCcceeec-CCCCeEEEEecCCCCCccceee-----------------------E
Q psy467 176 NTSIHVVDLSLVHP--LG--TPPPQYTSSVPFS-HNTSLRKSFTKGRPGGTKAKID-----------------------V 227 (845)
Q Consensus 176 ~~~I~vWDl~tg~~--l~--~~~~~~i~svs~s-pdg~~l~~~~~h~~~~~~~~i~-----------------------V 227 (845)
++|...|.+ +. .-+.....++.|. .+|..+..... ... -+.+. +
T Consensus 316 -----vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~-Drt--~r~fs~~~e~~~~~l~~~~~~~~~kk~~~ 387 (910)
T KOG1539|consen 316 -----VFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQ-DRT--LRSFSVISESQSQELGQLHNKKRAKKVNV 387 (910)
T ss_pred -----EeeCCCCcchheeeccCCCCCchheeeeccCcEEEEeccc-Ccc--hhhhhhhHHHHhHhhcccccccccccccc
Confidence 234322211 00 0112223333333 22222211100 000 00000 0
Q ss_pred e-----eecccccccccccchhhhhhc---cCCCceeEEEcCCCCcC-----CCCcccccccCceeEEEcCCCCcccceE
Q psy467 228 T-----RIEENAESEDQAGEEELFATI---ANPCDYSAIFQPHRSLN-----RSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 228 ~-----~i~~~~~~~~~~~~~~l~~~~---~~~~~~~l~fspdg~~~-----~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
. .+............+..|... ......+..|+-..+.. ...........+++++.++.|+ +
T Consensus 388 ~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGN-----F 462 (910)
T KOG1539|consen 388 FSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGN-----F 462 (910)
T ss_pred cchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCc-----e
Confidence 0 000000000000000111000 00000112222111100 1111112346778999999999 8
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEe---cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC-----------------
Q psy467 295 TTSSSADRTVNFWDLEKFSLVSTT---EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA----------------- 353 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~~~l~tl---~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg----------------- 353 (845)
.+.|.+.|.|-+|++.+|-....+ ..|.++|+.++....++.+++++.+| +++||+...
T Consensus 463 ~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~ 542 (910)
T KOG1539|consen 463 VFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVY 542 (910)
T ss_pred EEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeee
Confidence 999999999999999999988888 47999999999999999999999999 999997632
Q ss_pred ------------------------ceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 354 ------------------------RQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 354 ------------------------k~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
+.++.+.+|.+.|++++|| ||++|+++ +.+|.+
T Consensus 543 hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDl 605 (910)
T KOG1539|consen 543 HRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDL 605 (910)
T ss_pred eehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEec
Confidence 1334567899999999999 99999988 899965
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-19 Score=186.44 Aligned_cols=251 Identities=18% Similarity=0.276 Sum_probs=197.8
Q ss_pred cceeeeeEE--------eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCC--
Q psy467 2 RAKVEKAED--------FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE-- 71 (845)
Q Consensus 2 ~irlw~l~~--------L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~-- 71 (845)
++|+|.++. ...|.++|.+++|+. +|..+++|+.|+.+++||+.++ .+..+..|..+|.++.|-+...
T Consensus 51 tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~ 128 (347)
T KOG0647|consen 51 TVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQ 128 (347)
T ss_pred ceEEEEEecCCcccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEEEEccCC-CeeeeeecccceeEEEEecCCCcc
Confidence 578999875 457999999999998 9999999999999999999998 4556777999999999988665
Q ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE--EcCCCCCeEEEE
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT--YRGHSKSINSIR 149 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~--~~~h~~~V~sLa 149 (845)
.|++|+.|.+|+.||.+...++.++. ....+.++..- ...++++..+..|.+|+++.+..... -....-.++|++
T Consensus 129 cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~--~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va 205 (347)
T KOG0647|consen 129 CLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVL--YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVA 205 (347)
T ss_pred eeEecccccceeecccCCCCeeeeee-ccceeeehhcc--CceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEE
Confidence 89999999999999999999999887 45567776554 45788899999999999976543221 112345789999
Q ss_pred EecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEee
Q psy467 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229 (845)
Q Consensus 150 fSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~ 229 (845)
..+|....+.|+-+|.+.+ ..+..+.... -.+|+.|.......
T Consensus 206 ~f~d~~~~alGsiEGrv~i-------------q~id~~~~~~------------------nFtFkCHR~~~~~~------ 248 (347)
T KOG0647|consen 206 CFQDKDGFALGSIEGRVAI-------------QYIDDPNPKD------------------NFTFKCHRSTNSVN------ 248 (347)
T ss_pred EEecCCceEeeeecceEEE-------------EecCCCCccC------------------ceeEEEeccCCCCC------
Confidence 9998888899999999999 6666543310 23444454321000
Q ss_pred ecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC
Q psy467 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 230 i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl 309 (845)
.....|++++|+|... .|+|.+.||+..+||-
T Consensus 249 -------------------------------------------~~VYaVNsi~FhP~hg-----tlvTaGsDGtf~FWDk 280 (347)
T KOG0647|consen 249 -------------------------------------------DDVYAVNSIAFHPVHG-----TLVTAGSDGTFSFWDK 280 (347)
T ss_pred -------------------------------------------CceEEecceEeecccc-----eEEEecCCceEEEecc
Confidence 0123455666666544 8999999999999999
Q ss_pred CCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeC
Q psy467 310 EKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 310 ~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~ 342 (845)
.....+.+...|..+|+|.+|+.+|.++|.+..
T Consensus 281 dar~kLk~s~~~~qpItcc~fn~~G~ifaYA~g 313 (347)
T KOG0647|consen 281 DARTKLKTSETHPQPITCCSFNRNGSIFAYALG 313 (347)
T ss_pred hhhhhhhccCcCCCccceeEecCCCCEEEEEee
Confidence 988889999999999999999999999987654
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.6e-20 Score=214.52 Aligned_cols=221 Identities=22% Similarity=0.343 Sum_probs=193.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEE--CCCcEEEEECCC------------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECC
Q psy467 56 GHSTPVESVQFGNGEETLSAGC--QSGSIKIWNLAV------------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121 (845)
Q Consensus 56 ~h~~~V~sLafSpdg~~LaSgs--~DGtV~VWDl~t------------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~D 121 (845)
.+...|.++..+||+..+++|+ .||.++||+.+. .+.+.++..|.+.|+|+.|+|||++||+|+.|
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD 90 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD 90 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc
Confidence 3456799999999999999999 799999998752 23456677899999999999999999999999
Q ss_pred CeEEEEECCC------------------CceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEE
Q psy467 122 SFIKLWDLRR------------------KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVD 183 (845)
Q Consensus 122 G~I~IWDl~t------------------~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWD 183 (845)
+.|.+|+... .+++..+.+|...|..++|+|++.+|++++.|++|.+ ||
T Consensus 91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsVii-------------wn 157 (942)
T KOG0973|consen 91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVII-------------WN 157 (942)
T ss_pred ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEE-------------Ec
Confidence 9999998762 1367788899999999999999999999999999999 99
Q ss_pred CCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCC
Q psy467 184 LSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHR 263 (845)
Q Consensus 184 l~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg 263 (845)
..+++. +..+.+|... | ..+.|.|-|
T Consensus 158 ~~tF~~--------------------~~vl~~H~s~-------V---------------------------KGvs~DP~G 183 (942)
T KOG0973|consen 158 AKTFEL--------------------LKVLRGHQSL-------V---------------------------KGVSWDPIG 183 (942)
T ss_pred ccccee--------------------eeeeeccccc-------c---------------------------cceEECCcc
Confidence 999987 8888999888 7 778888888
Q ss_pred CcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC------CCCEEEEEEeCCCCEE
Q psy467 264 SLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN------SSTIRRLTFSEGGECL 337 (845)
Q Consensus 264 ~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh------~~~VtslafSpdG~~L 337 (845)
+ +||+-+.|++|+||++.++...+.+.++ ......+.|||||++|
T Consensus 184 k-----------------------------y~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~l 234 (942)
T KOG0973|consen 184 K-----------------------------YFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHL 234 (942)
T ss_pred C-----------------------------eeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCee
Confidence 8 9999999999999999998888887754 2357899999999999
Q ss_pred EEEeC--CC---EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 338 LGGDT--EG---LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 338 asgs~--DG---I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
++... ++ +.|.+-++.+.-..+-+|..++..+.|+
T Consensus 235 as~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFn 274 (942)
T KOG0973|consen 235 ASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFN 274 (942)
T ss_pred cchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeC
Confidence 98643 22 9999988888888999999999999998
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-18 Score=185.37 Aligned_cols=343 Identities=17% Similarity=0.228 Sum_probs=231.7
Q ss_pred ceeee------eEEeccCCCcEEEEEEecCC-CCEEEEE--eCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEE
Q psy467 3 AKVEK------AEDFMAHGASVNCLALGKKS-GQVLATG--GDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73 (845)
Q Consensus 3 irlw~------l~~L~gH~~~V~~LafSp~d-g~~LaTg--s~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~L 73 (845)
+|+|+ ++-|-.....|.|++||+.+ |.+++.- +.+..+.+||...+......+..+..|....|+|.+..|
T Consensus 136 vriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nl 215 (626)
T KOG2106|consen 136 VRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNL 215 (626)
T ss_pred eeecccccceeeeeeccccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcE
Confidence 56777 44455677889999999854 4555544 345578999998888777777778899999999977666
Q ss_pred EEEECCCcEEEEECCCCcEEEEE---cC-CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEE
Q psy467 74 SAGCQSGSIKIWNLAVPTVQRTL---NG-HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~~v~~l---~~-h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLa 149 (845)
+..+..|.+.+|+++.+...++. .. .+..|.|++|.++|. +++|..+|.|.||+..+.+..+....|.+.|.+++
T Consensus 216 iit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~ 294 (626)
T KOG2106|consen 216 IITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLC 294 (626)
T ss_pred EEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEE
Confidence 66667899999999988766543 22 336799999999986 78999999999999988888777779999999999
Q ss_pred EecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--C--CCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--P--PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 150 fSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--~--~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
.-.+|.+| +|+.|..|.. ||-. -+.+... + ...++.++-...+-++-+- ... +
T Consensus 295 ~lr~Gtll-SGgKDRki~~-------------Wd~~-y~k~r~~elPe~~G~iRtv~e~~~di~vGTt---rN~-----i 351 (626)
T KOG2106|consen 295 MLRDGTLL-SGGKDRKIIL-------------WDDN-YRKLRETELPEQFGPIRTVAEGKGDILVGTT---RNF-----I 351 (626)
T ss_pred EecCccEe-ecCccceEEe-------------cccc-ccccccccCchhcCCeeEEecCCCcEEEeec---cce-----E
Confidence 99998755 5999999999 8832 2221111 1 1223333222111111000 000 0
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcC-CC--------------CcccccccCceeEEEcCCCCcc
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN-RS--------------GTCVPVSVSRTSLSILPQSPML 290 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~-~~--------------~~~~~~~~~I~slafSPdg~~~ 290 (845)
---.++.... +.........+.++.+|+.... .. .-......+..+++|+|.|
T Consensus 352 L~Gt~~~~f~---------~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k~~wt~~~~d~~~~~~fhpsg--- 419 (626)
T KOG2106|consen 352 LQGTLENGFT---------LTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHKLEWTKIIEDPAECADFHPSG--- 419 (626)
T ss_pred EEeeecCCce---------EEEEecccceeeEEcCCChhheeeccCcceEEEccCCceeEEEEecCceeEeeccCcc---
Confidence 0000000000 0000000011333333332211 00 0112335677899999998
Q ss_pred cceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC-ceEEEecC-CCCCeE
Q psy467 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA-RQYDAQPM-GWGKVQ 367 (845)
Q Consensus 291 ~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg-k~l~tl~~-h~~~Vt 367 (845)
.+|.|...|...+.|.++...+..-.. +.+++++.|+|+|.+||.|+.|+ |+||-+..+ ..+..... +...|+
T Consensus 420 ---~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~it 495 (626)
T KOG2106|consen 420 ---VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPIT 495 (626)
T ss_pred ---eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeE
Confidence 589999999999999998666555444 88999999999999999999999 999998865 33333322 347899
Q ss_pred EEEEc-CCceEEEE-----EEEEe
Q psy467 368 DLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 368 sVafS-dg~lLaaS-----VsiW~ 385 (845)
.+.|| |++++..- +-.|.
T Consensus 496 hLDwS~Ds~~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 496 HLDWSSDSQFLVSNSGDYEILYWK 519 (626)
T ss_pred EeeecCCCceEEeccCceEEEEEc
Confidence 99999 99988765 77784
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-18 Score=180.98 Aligned_cols=241 Identities=16% Similarity=0.229 Sum_probs=201.0
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEE
Q psy467 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKL 126 (845)
Q Consensus 49 ~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~I 126 (845)
+..+.+......|+++.|+++|.+|++++.|.++++||..++++++++..++..+..++|....+.++.++. |.+|+.
T Consensus 5 ~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIry 84 (311)
T KOG1446|consen 5 RPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRY 84 (311)
T ss_pred ccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEE
Confidence 344555656789999999999999999999999999999999999999988888999999887777777765 889999
Q ss_pred EECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCC
Q psy467 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHN 206 (845)
Q Consensus 127 WDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spd 206 (845)
.++.+.+.++-|.+|...|.+++.+|-+..+++++.|++|++ ||++..++
T Consensus 85 Lsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrL-------------WDlR~~~c----------------- 134 (311)
T KOG1446|consen 85 LSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRL-------------WDLRVKKC----------------- 134 (311)
T ss_pred EEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEe-------------eEecCCCC-----------------
Confidence 999999999999999999999999999999999999999999 99997776
Q ss_pred CCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 207 TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 207 g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
...+..... ...+|+|.|-
T Consensus 135 ---qg~l~~~~~------------------------------------pi~AfDp~GL---------------------- 153 (311)
T KOG1446|consen 135 ---QGLLNLSGR------------------------------------PIAAFDPEGL---------------------- 153 (311)
T ss_pred ---ceEEecCCC------------------------------------cceeECCCCc----------------------
Confidence 222211111 3466777776
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCC--eEEEEec---CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKF--SLVSTTE---KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP 360 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~--~~l~tl~---gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~ 360 (845)
++|++.....|++||++.. .+..++. +.....+.+.|||||++|+.++..+ +++.|.-+|....++.
T Consensus 154 -------ifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs 226 (311)
T KOG1446|consen 154 -------IFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFS 226 (311)
T ss_pred -------EEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEe
Confidence 8888888779999999864 3444443 3356789999999999999999999 9999999999988888
Q ss_pred CCCCCe---EEEEEc-CCceEEEE-----EEEEeeC
Q psy467 361 MGWGKV---QDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 361 ~h~~~V---tsVafS-dg~lLaaS-----VsiW~~d 387 (845)
.+...- -+.+|+ |++++..+ +-+|.+.
T Consensus 227 ~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~ 262 (311)
T KOG1446|consen 227 GYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLE 262 (311)
T ss_pred eccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcC
Confidence 766432 566787 99999998 9999763
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-19 Score=183.55 Aligned_cols=278 Identities=17% Similarity=0.281 Sum_probs=208.2
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe------------eE---EEecCCCCCeEEEEEcC-CCCEEE
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN------------CI---MSLSGHSTPVESVQFGN-GEETLS 74 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~------------~i---~~l~~h~~~V~sLafSp-dg~~La 74 (845)
...|.+.|+++...+..|+++++|+.||.|.+||++... ++ ..-.+|...|..+.|-| |...+.
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt 118 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT 118 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence 457999999999999999999999999999999996432 11 11246888999999999 666788
Q ss_pred EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCC---CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEe
Q psy467 75 AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG---DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 75 Sgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg---~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafS 151 (845)
+++-|.+++|||..+-+....|+ .++.|..-+|+|-. .++|+|..|-.|++-|+.+|.+-+++.+|.+.|.++.|+
T Consensus 119 ssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Ws 197 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWS 197 (397)
T ss_pred cccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEec
Confidence 88999999999999988888887 66778888999843 467888888899999999999999999999999999999
Q ss_pred cCCCE-EEEEeCCCcEEEeeeeccCCceeEEEECCCC-ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEee
Q psy467 152 PDGQW-IASGGEDGVVRIGASFHLTNTSIHVVDLSLV-HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229 (845)
Q Consensus 152 Pdg~~-Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg-~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~ 229 (845)
|...+ |++|+.||.|++ ||++.. .+ +.++..|... -
T Consensus 198 p~~e~vLatgsaDg~irl-------------WDiRrasgc--------------------f~~lD~hn~k-------~-- 235 (397)
T KOG4283|consen 198 PSSEWVLATGSADGAIRL-------------WDIRRASGC--------------------FRVLDQHNTK-------R-- 235 (397)
T ss_pred cCceeEEEecCCCceEEE-------------EEeecccce--------------------eEEeecccCc-------c--
Confidence 98776 789999999999 999864 33 4444443321 0
Q ss_pred ecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC
Q psy467 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 230 i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl 309 (845)
.........+.+.++.+||+.|+. ++++++.|..+++|+.
T Consensus 236 -----------------------------------~p~~~~n~ah~gkvngla~tSd~~-----~l~~~gtd~r~r~wn~ 275 (397)
T KOG4283|consen 236 -----------------------------------PPILKTNTAHYGKVNGLAWTSDAR-----YLASCGTDDRIRVWNM 275 (397)
T ss_pred -----------------------------------Cccccccccccceeeeeeecccch-----hhhhccCccceEEeec
Confidence 000011233456688899999998 8999999999999999
Q ss_pred CCCeEEE-Eec--CCCC---CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 310 EKFSLVS-TTE--KNSS---TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 310 ~s~~~l~-tl~--gh~~---~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
.+|+-.. .+. .|+. .-..+. +-+...++.--.++ +.++++-.+..+..+..|...|.+.++-
T Consensus 276 ~~G~ntl~~~g~~~~n~~~~~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~ 344 (397)
T KOG4283|consen 276 ESGRNTLREFGPIIHNQTTSFAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYR 344 (397)
T ss_pred ccCcccccccccccccccccceEEEe-ecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeec
Confidence 8875321 111 1111 111122 22333333333335 9999999999999999997777766665
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-18 Score=173.47 Aligned_cols=246 Identities=20% Similarity=0.331 Sum_probs=202.7
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC--ee---EEEecCCCCCeEEEEEcC----CCCEEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS--NC---IMSLSGHSTPVESVQFGN----GEETLSAGCQ 78 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~---i~~l~~h~~~V~sLafSp----dg~~LaSgs~ 78 (845)
.++-+.|.+.|.|.+||| +|+++|+|+.|.+|++.-.... +. -..+.-|.+.|..++|-. .+..|++++.
T Consensus 82 ~kr~khhkgsiyc~~ws~-~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~ga 160 (350)
T KOG0641|consen 82 CKRNKHHKGSIYCTAWSP-CGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGA 160 (350)
T ss_pred eeeccccCccEEEEEecC-ccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCC
Confidence 356678999999999999 9999999999999998765332 22 245778999999999964 3556777654
Q ss_pred -CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-------CCCCeEEEEE
Q psy467 79 -SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-------HSKSINSIRF 150 (845)
Q Consensus 79 -DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-------h~~~V~sLaf 150 (845)
|..|.+-|...|+..+.+.+|.+.|.++- +=+|-.+++|+.|.+|++||++-..++.++.. ....|.+++.
T Consensus 161 gdc~iy~tdc~~g~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v 239 (350)
T KOG0641|consen 161 GDCKIYITDCGRGQGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV 239 (350)
T ss_pred CcceEEEeecCCCCcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE
Confidence 77888889999999999999999998763 33578999999999999999998888877642 2357899999
Q ss_pred ecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 151 SPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 151 SPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
.|.|++|++|-.|....+ ||++.+.. +..+..|... |
T Consensus 240 dpsgrll~sg~~dssc~l-------------ydirg~r~--------------------iq~f~phsad-------i--- 276 (350)
T KOG0641|consen 240 DPSGRLLASGHADSSCML-------------YDIRGGRM--------------------IQRFHPHSAD-------I--- 276 (350)
T ss_pred CCCcceeeeccCCCceEE-------------EEeeCCce--------------------eeeeCCCccc-------e---
Confidence 999999999999999999 99998888 7777777666 6
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
.++.|+|... ++.+++.|..|++-|+.
T Consensus 277 ------------------------r~vrfsp~a~-----------------------------yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 277 ------------------------RCVRFSPGAH-----------------------------YLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred ------------------------eEEEeCCCce-----------------------------EEEEecccceEEEeecc
Confidence 7777777776 99999999999999986
Q ss_pred CC----eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 311 KF----SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 311 s~----~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
.. -++.....|...+..+.|+|..--+++.+.|. +.+|.+.
T Consensus 304 gdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 304 GDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred cchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 42 23444557888899999999988888889998 9999764
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-20 Score=214.14 Aligned_cols=237 Identities=22% Similarity=0.460 Sum_probs=191.6
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCC---CeeEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCcE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGK---SNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t---~~~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~tg~~ 92 (845)
.+..+.|+.-..++|||++..|.|.+||+.. .+.+..+..|...++++.|++ ...+|++|+.||+|++||++..+-
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S 168 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKS 168 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccc
Confidence 3556777765778999999999999999976 556677889999999999998 457899999999999999999988
Q ss_pred EEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEee
Q psy467 93 QRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170 (845)
Q Consensus 93 v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~ 170 (845)
..++.+....|..++|+| .+.+|+++...|.+.+||++.. ++...+.+|.++|.|+.|+|++.+||+||.|++|+|
T Consensus 169 ~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vki-- 246 (839)
T KOG0269|consen 169 KSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKI-- 246 (839)
T ss_pred cccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEE--
Confidence 888888888999999999 5688999999999999999864 567788899999999999999999999999999999
Q ss_pred eeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhcc
Q psy467 171 SFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250 (845)
Q Consensus 171 ~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~ 250 (845)
||+.+.+.. .+.++.... + +
T Consensus 247 -----------Wd~t~~~~~------------------~~~tInTia-p-------v----------------------- 266 (839)
T KOG0269|consen 247 -----------WDMTDSRAK------------------PKHTINTIA-P-------V----------------------- 266 (839)
T ss_pred -----------EeccCCCcc------------------ceeEEeecc-e-------e-----------------------
Confidence 999865541 022211100 0 2
Q ss_pred CCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe--CCCeEEEEECCCC-eEEEEecCCCCCEEE
Q psy467 251 NPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS--ADRTVNFWDLEKF-SLVSTTEKNSSTIRR 327 (845)
Q Consensus 251 ~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs--~DG~I~IWDl~s~-~~l~tl~gh~~~Vts 327 (845)
..+.|-|... . .|++++ .|..|+|||++.. -+..++..|...++.
T Consensus 267 ----~rVkWRP~~~------------------------~----hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~ 314 (839)
T KOG0269|consen 267 ----GRVKWRPARS------------------------Y----HLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTG 314 (839)
T ss_pred ----eeeeeccCcc------------------------c----hhhhhhccccceEEEEeeccccccceeeeccCccccc
Confidence 4555555544 2 677765 4778999999754 567888999999999
Q ss_pred EEEeC-CCCEEEEEeCCC-EEE
Q psy467 328 LTFSE-GGECLLGGDTEG-LKV 347 (845)
Q Consensus 328 lafSp-dG~~Lasgs~DG-I~I 347 (845)
++|.. |-..+.+++.|+ |..
T Consensus 315 i~W~~~d~~~l~s~sKD~tv~q 336 (839)
T KOG0269|consen 315 IAWDSGDRINLWSCSKDGTVLQ 336 (839)
T ss_pred eeccCCCceeeEeecCccHHHH
Confidence 99976 556778888888 443
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.4e-20 Score=186.11 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=195.7
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC---eeEEEecCCCCCeEEEEEcC--CCCEEEEEECCCcEEEEE
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS---NCIMSLSGHSTPVESVQFGN--GEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~---~~i~~l~~h~~~V~sLafSp--dg~~LaSgs~DGtV~VWD 86 (845)
..|.+.|..+...- -|..|||++.|++|+|+.+... +.+.++.+|.++|+.++|.. .|..||+++.||.|.||.
T Consensus 8 t~H~D~IHda~lDy-ygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk 86 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDY-YGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK 86 (299)
T ss_pred hhhhhhhhHhhhhh-hcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence 46888888888776 8999999999999999998653 56788999999999999976 799999999999999999
Q ss_pred CCCCcE--EEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCC---ceEEEEcCCCCCeEEEEEecC---C--
Q psy467 87 LAVPTV--QRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRK---GCIYTYRGHSKSINSIRFSPD---G-- 154 (845)
Q Consensus 87 l~tg~~--v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~---~~l~~~~~h~~~V~sLafSPd---g-- 154 (845)
-.+++- ......|...|++++|.|. |-.|++++.||.|.+.+.++. ........|.-.|++++|.|. |
T Consensus 87 e~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~ 166 (299)
T KOG1332|consen 87 EENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSL 166 (299)
T ss_pred cCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccc
Confidence 988742 3445679999999999985 468899999999999998654 123345679999999999985 4
Q ss_pred ---------CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 155 ---------QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 155 ---------~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+.|++|+.|..|++ |+..++.-. .-.++.+|.+.
T Consensus 167 ~~~~~~~~~krlvSgGcDn~Vki-------------W~~~~~~w~------------------~e~~l~~H~dw------ 209 (299)
T KOG1332|consen 167 VDQGPAAKVKRLVSGGCDNLVKI-------------WKFDSDSWK------------------LERTLEGHKDW------ 209 (299)
T ss_pred cccCcccccceeeccCCccceee-------------eecCCcchh------------------hhhhhhhcchh------
Confidence 56999999999999 988775320 02235666666
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
| ..++|.|.-.+ | ...+|+++.||+|.
T Consensus 210 -V---------------------------RDVAwaP~~gl-------------------~------~s~iAS~SqDg~vi 236 (299)
T KOG1332|consen 210 -V---------------------------RDVAWAPSVGL-------------------P------KSTIASCSQDGTVI 236 (299)
T ss_pred -h---------------------------hhhhhccccCC-------------------C------ceeeEEecCCCcEE
Confidence 5 55666665320 0 01899999999999
Q ss_pred EEECCCC--e-EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 306 FWDLEKF--S-LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 306 IWDl~s~--~-~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
||-.+.. . ....+......+..+.||..|.+|++++.|+ |.+|.-..
T Consensus 237 Iwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 237 IWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred EEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence 9976521 1 1122233456899999999999999999999 99997553
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.1e-19 Score=191.35 Aligned_cols=314 Identities=18% Similarity=0.268 Sum_probs=237.7
Q ss_pred EeccCC-CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 10 DFMAHG-ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 10 ~L~gH~-~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
.|++++ .-|.|++|.+ +|+ ++||..+|.|.||+..+.+..+....|.+.|.+++.-.+|.+|- |+.|..|..||-.
T Consensus 240 ~fek~ekk~Vl~v~F~e-ngd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~ 316 (626)
T KOG2106|consen 240 IFEKREKKFVLCVTFLE-NGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDN 316 (626)
T ss_pred ccccccceEEEEEEEcC-CCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCccceEEecccc
Confidence 455554 4799999998 776 77999999999999988888887779999999999999987655 9999999999832
Q ss_pred CCc-----------E-----------------------------EEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEE
Q psy467 89 VPT-----------V-----------------------------QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 89 tg~-----------~-----------------------------v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWD 128 (845)
-.+ . .....+|......++.+|+.+.+++++.|+.+++|+
T Consensus 317 y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~ 396 (626)
T KOG2106|consen 317 YRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN 396 (626)
T ss_pred ccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc
Confidence 000 0 011235777888999999999999999999999999
Q ss_pred CCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCC
Q psy467 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNT 207 (845)
Q Consensus 129 l~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg 207 (845)
..+++.+.. ...+..|+.|+|.| .+|.|...|...+ .|.++...+.... ..++..+.++|+|
T Consensus 397 --~~k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V-------------~d~e~~~lv~~~~d~~~ls~v~ysp~G 459 (626)
T KOG2106|consen 397 --DHKLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFV-------------LDTETQDLVTIHTDNEQLSVVRYSPDG 459 (626)
T ss_pred --CCceeEEEE-ecCceeEeeccCcc-eEEEeeccceEEE-------------EecccceeEEEEecCCceEEEEEcCCC
Confidence 455665554 56788999999999 9999999999988 8888855543322 6778899999999
Q ss_pred CeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcC-CCCcccccccCceeEEEcCC
Q psy467 208 SLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN-RSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 208 ~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~-~~~~~~~~~~~I~slafSPd 286 (845)
..++. ..|... + +....+.+++.. +-+.+. ..+|+.+.||+|
T Consensus 460 ~~lAv-gs~d~~-------i---------------------------yiy~Vs~~g~~y~r~~k~~--gs~ithLDwS~D 502 (626)
T KOG2106|consen 460 AFLAV-GSHDNH-------I---------------------------YIYRVSANGRKYSRVGKCS--GSPITHLDWSSD 502 (626)
T ss_pred CEEEE-ecCCCe-------E---------------------------EEEEECCCCcEEEEeeeec--CceeEEeeecCC
Confidence 98775 334444 4 445555555522 122222 278999999999
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCe--------------EEEEe----cCCCCCEEEEEEeCCCCEEEEEeCCC-EEE
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFS--------------LVSTT----EKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~--------------~l~tl----~gh~~~VtslafSpdG~~Lasgs~DG-I~I 347 (845)
++ ++.+-+.|-.|.+|.....+ +.--| ..+...|+.++-+.+.+++|+|.+.| |++
T Consensus 503 s~-----~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~l 577 (626)
T KOG2106|consen 503 SQ-----FLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHL 577 (626)
T ss_pred Cc-----eEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEE
Confidence 99 99999999999999543221 11111 13456788888899999999999999 999
Q ss_pred EEecCCc---eEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 348 YGWEPAR---QYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 348 WDl~tgk---~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
|...-.+ ....+.+|.+.|++++|. +.+.+.++ +..|.
T Consensus 578 f~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~ 624 (626)
T KOG2106|consen 578 FSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWR 624 (626)
T ss_pred EccccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEE
Confidence 9987543 346778999999999999 44444443 77775
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.7e-20 Score=199.25 Aligned_cols=242 Identities=19% Similarity=0.315 Sum_probs=183.9
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE------------ecCCCCCeEEEEEcCCC-CEEEEEECCC
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS------------LSGHSTPVESVQFGNGE-ETLSAGCQSG 80 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~------------l~~h~~~V~sLafSpdg-~~LaSgs~DG 80 (845)
-...|++++|++ +|+.|++.+.....+|+|-+..+.... .++|...++|.+|+|+. ..+++++.||
T Consensus 213 E~h~i~sl~ys~-Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~Dg 291 (641)
T KOG0772|consen 213 ETHQINSLQYSV-TGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDG 291 (641)
T ss_pred cccccceeeecC-CCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCC
Confidence 345899999999 888888777778999999765443322 35799999999999954 5788999999
Q ss_pred cEEEEECCCCc-EEEEEc-----CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc--eE-EEEcCCCC--CeEEEE
Q psy467 81 SIKIWNLAVPT-VQRTLN-----GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--CI-YTYRGHSK--SINSIR 149 (845)
Q Consensus 81 tV~VWDl~tg~-~v~~l~-----~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~--~l-~~~~~h~~--~V~sLa 149 (845)
++++||+...+ +...++ +..-+++.++|++||+.||+|+.||+|.+|+..... +. ..-.+|.. .|+|+.
T Consensus 292 tlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~ 371 (641)
T KOG0772|consen 292 TLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSIS 371 (641)
T ss_pred cEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEE
Confidence 99999998753 333332 234478999999999999999999999999985432 22 22245665 899999
Q ss_pred EecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEee
Q psy467 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229 (845)
Q Consensus 150 fSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~ 229 (845)
||+||++|++-+.|+++++ ||+++.+.- +..+.+-... .
T Consensus 372 FS~dg~~LlSRg~D~tLKv-------------WDLrq~kkp-------------------L~~~tgL~t~-------~-- 410 (641)
T KOG0772|consen 372 FSYDGNYLLSRGFDDTLKV-------------WDLRQFKKP-------------------LNVRTGLPTP-------F-- 410 (641)
T ss_pred eccccchhhhccCCCceee-------------eeccccccc-------------------hhhhcCCCcc-------C--
Confidence 9999999999999999999 999976650 2221111100 0
Q ss_pred ecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC------CCe
Q psy467 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA------DRT 303 (845)
Q Consensus 230 i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~------DG~ 303 (845)
..+.++|+|+.+ ++++|.+ .|.
T Consensus 411 -----------------------~~tdc~FSPd~k-----------------------------li~TGtS~~~~~~~g~ 438 (641)
T KOG0772|consen 411 -----------------------PGTDCCFSPDDK-----------------------------LILTGTSAPNGMTAGT 438 (641)
T ss_pred -----------------------CCCccccCCCce-----------------------------EEEecccccCCCCCce
Confidence 003444555544 8888753 478
Q ss_pred EEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 304 VNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 304 I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
+.+||..+...+..+.-....|..+.|+|.-+.|.+|+.|| ++||-
T Consensus 439 L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 439 LFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred EEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEEE
Confidence 99999999999999887788899999999988888898899 77764
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=187.54 Aligned_cols=249 Identities=18% Similarity=0.303 Sum_probs=210.8
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEE
Q psy467 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 49 ~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWD 128 (845)
..++.+.+|.+.|+.++-......+.+++.|.+.+||.+++|.++.++.+|.+.|++++|++.+.++++++.|++-+||.
T Consensus 139 ~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~ 218 (481)
T KOG0300|consen 139 RLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWK 218 (481)
T ss_pred eehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHH
Confidence 34567789999999999988778899999999999999999999999999999999999999999999999999999996
Q ss_pred C------CC----------------------------------CceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 129 L------RR----------------------------------KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 129 l------~t----------------------------------~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
. .. ..++..+++|.+.|.+..|-..|+.+++++.|.+..+
T Consensus 219 ~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnl 298 (481)
T KOG0300|consen 219 AAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANL 298 (481)
T ss_pred HhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecccccee
Confidence 2 10 0145667889999999999999999999999999999
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||++++.. +..+.+|... +
T Consensus 299 -------------wDVEtge~--------------------v~~LtGHd~E-------L--------------------- 317 (481)
T KOG0300|consen 299 -------------WDVETGEV--------------------VNILTGHDSE-------L--------------------- 317 (481)
T ss_pred -------------eeeccCce--------------------eccccCcchh-------c---------------------
Confidence 99999999 7788888776 5
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCCEEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSSTIRR 327 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~Vts 327 (845)
+.++-+|..+ ++++.+.|.+.++||++.. .-+..|+||...|++
T Consensus 318 ------tHcstHptQr-----------------------------LVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS 362 (481)
T KOG0300|consen 318 ------THCSTHPTQR-----------------------------LVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTS 362 (481)
T ss_pred ------cccccCCcce-----------------------------EEEEeccCceeEeccchhhcceeeeecccccceeE
Confidence 5666677776 9999999999999999854 457889999999999
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCc-eEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCCCCCcccc
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPAR-QYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDSGFSTLD 395 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk-~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~~~~~~~ 395 (845)
+.|.-|. .+++|++|. |+|||+.+-+ .+.++. -.+.++.++.+ .+..|+.- |.++.+.+..+..+.
T Consensus 363 ~vF~~dd-~vVSgSDDrTvKvWdLrNMRsplATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlP 436 (481)
T KOG0300|consen 363 VVFNTDD-RVVSGSDDRTVKVWDLRNMRSPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLP 436 (481)
T ss_pred EEEecCC-ceeecCCCceEEEeeeccccCcceeee-cCCccceeEeecCCceEEeccCCceEEEEecCCCccccCC
Confidence 9998765 577899999 9999998754 455555 45789999999 44566665 888888877766554
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-20 Score=207.76 Aligned_cols=246 Identities=23% Similarity=0.388 Sum_probs=208.0
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC--eeEEEecCCCCCeEEEEE-cCCCCEEEEEECCCcEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS--NCIMSLSGHSTPVESVQF-GNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~i~~l~~h~~~V~sLaf-Spdg~~LaSgs~DGtV~VW 85 (845)
.+++.|.+.|+.++... +++.|++++.|-+|++|+...+ -++.++..|.+.|.|+++ .++...+|+|+.|+.|.+|
T Consensus 67 asme~HsDWVNDiiL~~-~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflW 145 (735)
T KOG0308|consen 67 ASMEHHSDWVNDIILCG-NGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLW 145 (735)
T ss_pred hhhhhhHhHHhhHHhhc-CCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEE
Confidence 45778999999999998 8989999999999999999777 577888999999999999 7888899999999999999
Q ss_pred ECCCC--cEEEE--------Ec-CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC
Q psy467 86 NLAVP--TVQRT--------LN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 86 Dl~tg--~~v~~--------l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg 154 (845)
|+.++ +.+.+ +. ++...|.+++.++.|..|++|+..+.|++||.++++.+..+++|...|.++..++||
T Consensus 146 Din~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDG 225 (735)
T KOG0308|consen 146 DINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDG 225 (735)
T ss_pred EccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCC
Confidence 99987 23332 22 678899999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
+.+++++.||+|++ ||+...++ ++++..|... +
T Consensus 226 t~~ls~sSDgtIrl-------------WdLgqQrC--------------------l~T~~vH~e~-------V------- 258 (735)
T KOG0308|consen 226 TRLLSASSDGTIRL-------------WDLGQQRC--------------------LATYIVHKEG-------V------- 258 (735)
T ss_pred CeEeecCCCceEEe-------------eeccccce--------------------eeeEEeccCc-------e-------
Confidence 99999999999999 99999888 8888888887 7
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
+.+..+|+-. .+.+|+.||.|..=|+++...
T Consensus 259 --------------------WaL~~~~sf~-----------------------------~vYsG~rd~~i~~Tdl~n~~~ 289 (735)
T KOG0308|consen 259 --------------------WALQSSPSFT-----------------------------HVYSGGRDGNIYRTDLRNPAK 289 (735)
T ss_pred --------------------EEEeeCCCcc-----------------------------eEEecCCCCcEEecccCCchh
Confidence 6666666655 899999999999999988533
Q ss_pred EEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 315 VSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 315 l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
...+-....+|..+..+.+..-+-+++.|+ |+-|...
T Consensus 290 ~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~ 327 (735)
T KOG0308|consen 290 STLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLE 327 (735)
T ss_pred heEeecCCCchhhhhhccccCCceeeeccccceecCCc
Confidence 333333355777777765444445666777 8888654
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.2e-19 Score=189.19 Aligned_cols=310 Identities=22% Similarity=0.348 Sum_probs=206.3
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC---------eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS---------NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~---------~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
...+|..+.|.+.+...+|||+.|..|+||.+..+ +.+..+..|...|+++.|+|+|+.||+|+.+|.|.+
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l 91 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL 91 (434)
T ss_pred CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence 34589999999955559999999999999987432 234567889999999999999999999999999999
Q ss_pred EECC--------C--------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEE
Q psy467 85 WNLA--------V--------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148 (845)
Q Consensus 85 WDl~--------t--------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sL 148 (845)
|-.. + ....+.+.+|...|..++|+|++.++++++.|..+++||+..|..+..+..|...+..+
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgv 171 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGV 171 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccccccee
Confidence 9765 2 22345667899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCEEEEEeCCCcEEEeeeeccCC-ceeEEEE--C--------CCCccCCCCC----CCCCcceeecCCCCeEEEE
Q psy467 149 RFSPDGQWIASGGEDGVVRIGASFHLTN-TSIHVVD--L--------SLVHPLGTPP----PQYTSSVPFSHNTSLRKSF 213 (845)
Q Consensus 149 afSPdg~~Lasgs~DG~I~I~~~~~~~~-~~I~vWD--l--------~tg~~l~~~~----~~~i~svs~spdg~~l~~~ 213 (845)
+|.|-++++++-+.|...+. +...- ..++... . ..+......+ +...+.++|+|+|.++.+-
T Consensus 172 awDpl~qyv~s~s~dr~~~~---~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtP 248 (434)
T KOG1009|consen 172 AWDPLNQYVASKSSDRHPEG---FSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTP 248 (434)
T ss_pred ecchhhhhhhhhccCcccce---eeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcc
Confidence 99999999999888875554 00000 0000000 0 0011111111 3345677888999877654
Q ss_pred ecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC-------
Q psy467 214 TKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ------- 286 (845)
Q Consensus 214 ~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd------- 286 (845)
.+-...+.....+ ....|+-...................+.|+|-
T Consensus 249 ag~~~~g~~~~~n----------------------------~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~ 300 (434)
T KOG1009|consen 249 AGLFKVGGGVFRN----------------------------TSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPL 300 (434)
T ss_pred cceeeeCCceeec----------------------------eeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccc
Confidence 3322111110011 11111111000000000000111122222220
Q ss_pred C-C----cccceEEEEEeCCCeEEEEECCCCeEEEEecC-CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc
Q psy467 287 S-P----MLCFILTTSSSADRTVNFWDLEKFSLVSTTEK-NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 287 g-~----~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g-h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk 354 (845)
. . .+++.++++-...+.|+|||..+..++..... |-..++.++|++||.+|+..+.|| ..+..++..+
T Consensus 301 ~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~e 375 (434)
T KOG1009|consen 301 SSEKFLFVLPYRLVFAIATKNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWE 375 (434)
T ss_pred cccccccccccceEEEEeecceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchh
Confidence 0 0 01122344444466899999999888777664 778999999999999999999999 6666666544
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-19 Score=192.95 Aligned_cols=241 Identities=20% Similarity=0.326 Sum_probs=190.8
Q ss_pred CCCCCeEEEEEcCCC-CEEEEEECCCcEEEEECCCCc----------EEEEEcCCCCCeEEEEEccCC-CEEEEEECCCe
Q psy467 56 GHSTPVESVQFGNGE-ETLSAGCQSGSIKIWNLAVPT----------VQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSF 123 (845)
Q Consensus 56 ~h~~~V~sLafSpdg-~~LaSgs~DGtV~VWDl~tg~----------~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~ 123 (845)
.|.+.|+.+..-|.. ..+|+++..+.|.|||..... +-.++.+|.+.-..++|++.. -.|++++.|+.
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~ 201 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT 201 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence 488999999999854 566777789999999986531 223678898888899999854 47899999999
Q ss_pred EEEEECCCCc-------eEEEEcCCCCCeEEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCC
Q psy467 124 IKLWDLRRKG-------CIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP 195 (845)
Q Consensus 124 I~IWDl~t~~-------~l~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~ 195 (845)
|++||+.... ....+.+|...|..++|++ +...|++++.|+.+.| ||++++..
T Consensus 202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~i-------------wD~R~~~~------ 262 (422)
T KOG0264|consen 202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMI-------------WDTRSNTS------ 262 (422)
T ss_pred EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEE-------------EEcCCCCC------
Confidence 9999996432 3567789999999999999 5667899999999999 99996311
Q ss_pred CCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccc
Q psy467 196 QYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVS 275 (845)
Q Consensus 196 ~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~ 275 (845)
+......+|... + .+++|+|.+.
T Consensus 263 ------------~~~~~~~ah~~~-------v---------------------------n~~~fnp~~~----------- 285 (422)
T KOG0264|consen 263 ------------KPSHSVKAHSAE-------V---------------------------NCVAFNPFNE----------- 285 (422)
T ss_pred ------------CCcccccccCCc-------e---------------------------eEEEeCCCCC-----------
Confidence 003334455555 5 6666666544
Q ss_pred cCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCCEEEEEEeCC-CCEEEEEeCCC-EEEEEecC
Q psy467 276 VSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSSTIRRLTFSEG-GECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 276 ~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~VtslafSpd-G~~Lasgs~DG-I~IWDl~t 352 (845)
. +||+|+.|++|.+||+++. ++++++.+|...|.++.|||+ ...||+++.|+ +.|||+..
T Consensus 286 -------------~----ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 286 -------------F----ILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred -------------c----eEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 2 8999999999999999875 578999999999999999996 56888999999 99999874
Q ss_pred C--------------ceEEEecCCCCCeEEEEEc-CCceEEEE------EEEEeeCCC
Q psy467 353 A--------------RQYDAQPMGWGKVQDLAVT-GTQLWFRR------VGTWSHQDS 389 (845)
Q Consensus 353 g--------------k~l~tl~~h~~~VtsVafS-dg~lLaaS------VsiW~~d~~ 389 (845)
- +++..-.||...|.++.|+ ...++.+| +.||.+...
T Consensus 349 ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~~ 406 (422)
T KOG0264|consen 349 IGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAEN 406 (422)
T ss_pred cccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecccc
Confidence 2 3445667899999999999 66677777 889986544
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-19 Score=179.44 Aligned_cols=254 Identities=19% Similarity=0.287 Sum_probs=191.7
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC---cEEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEEEEE
Q psy467 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP---TVQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 54 l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg---~~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWD 128 (845)
-..|.+.|..+...-.|+.||+++.|++|+|+.+++. +++.++.+|.++|..++|.. .|..||+++.||.|.||.
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk 86 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK 86 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence 3568889999988889999999999999999999875 46788999999999999976 799999999999999999
Q ss_pred CCCCc--eEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeec
Q psy467 129 LRRKG--CIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFS 204 (845)
Q Consensus 129 l~t~~--~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~s 204 (845)
-.+++ ....+..|...|++++|.|. |-.|++++.||.|.+ .+.+.......
T Consensus 87 e~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsv-------------l~~~~~g~w~t------------ 141 (299)
T KOG1332|consen 87 EENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSV-------------LTYDSSGGWTT------------ 141 (299)
T ss_pred cCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEE-------------EEEcCCCCccc------------
Confidence 87764 34556789999999999995 668999999999999 55543311000
Q ss_pred CCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCC---cCCCCcccccccCceeE
Q psy467 205 HNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS---LNRSGTCVPVSVSRTSL 281 (845)
Q Consensus 205 pdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~---~~~~~~~~~~~~~I~sl 281 (845)
-.....|..+ + .++.|.|... ....+..
T Consensus 142 -----~ki~~aH~~G-------v---------------------------nsVswapa~~~g~~~~~~~~---------- 172 (299)
T KOG1332|consen 142 -----SKIVFAHEIG-------V---------------------------NSVSWAPASAPGSLVDQGPA---------- 172 (299)
T ss_pred -----hhhhhccccc-------c---------------------------ceeeecCcCCCccccccCcc----------
Confidence 1112234444 4 5566665521 0000000
Q ss_pred EEcCCCCcccceEEEEEeCCCeEEEEECCCC--eEEEEecCCCCCEEEEEEeCC----CCEEEEEeCCC-EEEEEecCC-
Q psy467 282 SILPQSPMLCFILTTSSSADRTVNFWDLEKF--SLVSTTEKNSSTIRRLTFSEG----GECLLGGDTEG-LKVYGWEPA- 353 (845)
Q Consensus 282 afSPdg~~~~~~lLatgs~DG~I~IWDl~s~--~~l~tl~gh~~~VtslafSpd----G~~Lasgs~DG-I~IWDl~tg- 353 (845)
.+ -+ .|++|+.|+.|+||+..++ +.-+++.+|.+.|+.++|.|. -.+||+++.|| +.||..+..
T Consensus 173 --~~-~k-----rlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~ 244 (299)
T KOG1332|consen 173 --AK-VK-----RLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEY 244 (299)
T ss_pred --cc-cc-----eeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCcc
Confidence 00 01 6999999999999998875 445568999999999999996 35899999999 999987632
Q ss_pred c--eEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 354 R--QYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 354 k--~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
+ ....+......++.++|| .|..|+++ |.+|.-+..
T Consensus 245 e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~ 288 (299)
T KOG1332|consen 245 EPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVD 288 (299)
T ss_pred CcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCCC
Confidence 1 112334456789999999 99999999 999975543
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-19 Score=191.94 Aligned_cols=255 Identities=18% Similarity=0.271 Sum_probs=201.8
Q ss_pred cceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
.+++|++ .+|.+|.+.|..|++.. ..+++++.|.+|+.|.++. ..++++.+ ...+..+.-+..++.++|
T Consensus 90 ~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~---~~~~tvgdDKtvK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~~FaT 164 (433)
T KOG0268|consen 90 EVKIWNLSQRECIRTFKAHEGLVRGICVTQ---TSFFTVGDDKTVKQWKIDG-PPLHTILG-KSVYLGIDHHRKNSVFAT 164 (433)
T ss_pred eEEEEehhhhhhhheeecccCceeeEEecc---cceEEecCCcceeeeeccC-Ccceeeec-cccccccccccccccccc
Confidence 3689986 56999999999999964 6788999999999999865 46666653 455777777777778888
Q ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg 154 (845)
++. .|.|||..-..++..+.-....|.++.|+|.. ..|++|+.|+.|.+||++++.++.... ....-+.++|+|.+
T Consensus 165 cGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPea 241 (433)
T KOG0268|consen 165 CGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEA 241 (433)
T ss_pred cCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee-eeccccceecCccc
Confidence 754 59999999999999998888899999999976 466777799999999999999887765 34456789999977
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
-.+.++++|..++. ||++.... .+....+|... |
T Consensus 242 fnF~~a~ED~nlY~-------------~DmR~l~~-------------------p~~v~~dhvsA-------V------- 275 (433)
T KOG0268|consen 242 FNFVAANEDHNLYT-------------YDMRNLSR-------------------PLNVHKDHVSA-------V------- 275 (433)
T ss_pred cceeecccccccee-------------hhhhhhcc-------------------cchhhccccee-------E-------
Confidence 77999999999999 99986554 03344445444 4
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
..+.|+|.|+ -+++||.|.+|+||.++.+.-
T Consensus 276 --------------------~dVdfsptG~-----------------------------EfvsgsyDksIRIf~~~~~~S 306 (433)
T KOG0268|consen 276 --------------------MDVDFSPTGQ-----------------------------EFVSGSYDKSIRIFPVNHGHS 306 (433)
T ss_pred --------------------EEeccCCCcc-----------------------------hhccccccceEEEeecCCCcc
Confidence 5555555555 899999999999999987754
Q ss_pred EEEecC-CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 315 VSTTEK-NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 315 l~tl~g-h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
...+-. .-..|.|+.||.|.+|+++|++|+ |++|.....+.+..+
T Consensus 307 RdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Aseklgv~ 353 (433)
T KOG0268|consen 307 RDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKLGVI 353 (433)
T ss_pred hhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhhcCCC
Confidence 333321 124699999999999999999999 999998776555443
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-18 Score=179.40 Aligned_cols=242 Identities=19% Similarity=0.291 Sum_probs=188.7
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
-.|.+++.+++|.+ ...+++|+.||.|+.+|+.+++... +..|..+|.||.+++....+++|+.|++|++||.+...
T Consensus 51 ~~~~~plL~c~F~d--~~~~~~G~~dg~vr~~Dln~~~~~~-igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~ 127 (323)
T KOG1036|consen 51 FKHGAPLLDCAFAD--ESTIVTGGLDGQVRRYDLNTGNEDQ-IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKV 127 (323)
T ss_pred eecCCceeeeeccC--CceEEEeccCceEEEEEecCCccee-eccCCCceEEEEeeccCCeEEEcccCccEEEEeccccc
Confidence 35999999999975 5679999999999999998877655 45599999999999988899999999999999999765
Q ss_pred EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE--cCCCCCeEEEEEecCCCEEEEEeCCCcEEEe
Q psy467 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY--RGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169 (845)
Q Consensus 92 ~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~--~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~ 169 (845)
.+..+. ....|.++... ++.|++|+.|..|.+||+++....... ......+.|+++-|++.=+++++-||.|.+
T Consensus 128 ~~~~~d-~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVav- 203 (323)
T KOG1036|consen 128 VVGTFD-QGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAV- 203 (323)
T ss_pred cccccc-cCceEEEEecc--CCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEE-
Confidence 666665 34478888776 778999999999999999876544322 234567899999998888899999999988
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
=.+....... ..-..|+.|...
T Consensus 204 ------------E~~d~s~~~~----------------skkyaFkCHr~~------------------------------ 225 (323)
T KOG1036|consen 204 ------------EYFDDSEEAQ----------------SKKYAFKCHRLS------------------------------ 225 (323)
T ss_pred ------------EccCCchHHh----------------hhceeEEeeecc------------------------------
Confidence 2222211100 002233333322
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLT 329 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtsla 329 (845)
..-.....+|++++|+|-.. .|+||+.||.|.+||+.+.+.+..+......|.+++
T Consensus 226 -------------------~~~~~~~yPVNai~Fhp~~~-----tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~sls 281 (323)
T KOG1036|consen 226 -------------------EKDTEIIYPVNAIAFHPIHG-----TFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLS 281 (323)
T ss_pred -------------------cCCceEEEEeceeEeccccc-----eEEecCCCceEEEccCcchhhhhhccCCCCceEEEE
Confidence 01112345677888888766 899999999999999999999999988878899999
Q ss_pred EeCCCCEEEEEeC
Q psy467 330 FSEGGECLLGGDT 342 (845)
Q Consensus 330 fSpdG~~Lasgs~ 342 (845)
|+.||..||+|+.
T Consensus 282 fs~dG~~LAia~s 294 (323)
T KOG1036|consen 282 FSMDGSLLAIASS 294 (323)
T ss_pred eccCCCeEEEEec
Confidence 9999999999875
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.2e-19 Score=192.74 Aligned_cols=403 Identities=14% Similarity=0.199 Sum_probs=269.5
Q ss_pred EEEEEeCCCe--EEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Q psy467 30 VLATGGDDKK--VNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVD 107 (845)
Q Consensus 30 ~LaTgs~DG~--I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~la 107 (845)
.+++....+. ...|+.........-...+-.-+-+.|||.|.||++--.. -|.+|--.+...++.|. |.+ |..+.
T Consensus 180 Qf~v~~d~~~~~svfwN~~~n~p~~ie~RenWTetyv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~-Hp~-Vq~id 256 (698)
T KOG2314|consen 180 QFVVQDDVKTTVSVFWNSKFNEPSLIEERENWTETYVRWSPKGTYLVTFHKQ-GIALWGGESFDRIQRFY-HPG-VQFID 256 (698)
T ss_pred eEEEEecCcceeEEEccccCCchhhhhhhhcceeeeEEecCCceEEEEEecc-ceeeecCccHHHHHhcc-CCC-ceeee
Confidence 3444433333 5567764433333223344556789999999999998544 48999988888888886 665 89999
Q ss_pred EccCCCEEEEEEC-----------CCeEEEEECCCCceEEEEcC--CCCCeEE-EEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 108 FHPYGDYLCSGSL-----------DSFIKLWDLRRKGCIYTYRG--HSKSINS-IRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 108 fspdg~~Lasgs~-----------DG~I~IWDl~t~~~l~~~~~--h~~~V~s-LafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
|||+.+||+|-+. ...++|||+.+|...+.+.. ....++. +.||.|++++|....+ .|.|
T Consensus 257 fSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisI----- 330 (698)
T KOG2314|consen 257 FSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISI----- 330 (698)
T ss_pred cCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccc-eEEE-----
Confidence 9999999998652 25799999999999988876 3333443 5899999999988775 5778
Q ss_pred cCCceeEEEECCCCccCC--CCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccC
Q psy467 174 LTNTSIHVVDLSLVHPLG--TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIAN 251 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~--~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~ 251 (845)
|+..+...+. .+....++...|+|.+.+++.+...... ....+.+-.+......... .+. +
T Consensus 331 --------yEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~-~parvtL~evPs~~~iRt~----nlf----n 393 (698)
T KOG2314|consen 331 --------YETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNN-IPARVTLMEVPSKREIRTK----NLF----N 393 (698)
T ss_pred --------EecCceeeecccccCCccccCcccCCCcceEEEEcccccC-CcceEEEEecCccceeeec----cce----e
Confidence 7776655543 3447899999999999999988765544 1111112111111110000 000 0
Q ss_pred CCceeEEEcCCCCcC--------CC--C------------------cccccccCceeEEEcCCCCcccceEEEEEeCCCe
Q psy467 252 PCDYSAIFQPHRSLN--------RS--G------------------TCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT 303 (845)
Q Consensus 252 ~~~~~l~fspdg~~~--------~~--~------------------~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~ 303 (845)
-....+-|..+|..+ .. + ........|..++|-|.|..+| .|..-....+
T Consensus 394 VsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~--vi~g~~~k~t 471 (698)
T KOG2314|consen 394 VSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFA--VISGNTVKNT 471 (698)
T ss_pred eeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEE--EEEccccccc
Confidence 001222222222211 00 0 1112345667999999999653 3333334568
Q ss_pred EEEEECCC----CeEEEEecCCCCCEEEEEEeCCCCEEEEEeC---CC-EEEEEecCCceEEEecCCCCCeEEEEEc-CC
Q psy467 304 VNFWDLEK----FSLVSTTEKNSSTIRRLTFSEGGECLLGGDT---EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GT 374 (845)
Q Consensus 304 I~IWDl~s----~~~l~tl~gh~~~VtslafSpdG~~Lasgs~---DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg 374 (845)
+.+|.+++ .+++..+.. ...+.+.|+|.|++++.+.. .| +.++|..-..+..+-.......+.+.|. .|
T Consensus 472 vsfY~~e~~~~~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtG 549 (698)
T KOG2314|consen 472 VSFYAVETNIKKPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTG 549 (698)
T ss_pred eeEEEeecCCCchhhhhhhcc--cccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccccccceECCCC
Confidence 99998873 234555553 46889999999999988754 45 9999988644444444445678899999 99
Q ss_pred ceEEEEEEEEeeCCC----------------CCccccCCCCCCCCCCCCCCccccccCCCCCCccCCccccCCCcccccC
Q psy467 375 QLWFRRVGTWSHQDS----------------GFSTLDSYSAGSPVSTMGRERDQIVPMNLSAPIGLDMEQFLPKSYQTHQ 438 (845)
Q Consensus 375 ~lLaaSVsiW~~d~~----------------~~~~~~~~~~~~p~~~~~~~~~~~vp~~~~~~~~~d~~~~~p~~~~~~~ 438 (845)
+|+++++++|.+... .+..+++|. |.++++.+++...++.|.+||+++..+++
T Consensus 550 RYvvT~ss~wrhk~d~GYri~tfqGrll~~~~i~~f~qF~-------WRPRPps~LS~e~~KkIkKnLKky~a~Fe---- 618 (698)
T KOG2314|consen 550 RYVVTSSSSWRHKVDNGYRIFTFQGRLLKEDIIDRFKQFL-------WRPRPPSLLSEEKQKKIKKNLKKYSAQFE---- 618 (698)
T ss_pred CEEEEeeehhhhccccceEEEEeecHHHHHHHHHHHHhhc-------cCCCCCcccCHHHHHHHHHHHHHHHHHHh----
Confidence 999999888865322 344667888 55555566677777788999999988887
Q ss_pred CCCcCChhHHHHHHhhchHHHHHHHHH-hhhhHHHH
Q psy467 439 GKSSMSESELMSTIFNGHDKMMAVLRN-RQRSLGLV 473 (845)
Q Consensus 439 ~~~~~~~~~~~~~~~~~h~~~~~~l~~-R~~~~~~~ 473 (845)
.++.+..+.+++++.++|+++|+--.. |.+..+.+
T Consensus 619 eqD~~e~~~AsrElvekrRqlm~~f~~yR~~~~~~~ 654 (698)
T KOG2314|consen 619 EQDRLEQSRASRELVEKRRQLMEQFTEYREKIIEEM 654 (698)
T ss_pred hhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478899999999999999999987766 55555544
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3e-19 Score=200.39 Aligned_cols=245 Identities=20% Similarity=0.292 Sum_probs=206.4
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC---CCCEEEEEECCCcEEEEECCC-C
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN---GEETLSAGCQSGSIKIWNLAV-P 90 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp---dg~~LaSgs~DGtV~VWDl~t-g 90 (845)
.-.|.|++.|| +|++||+|..-|+++||++...+....+..|...|.|+.|+. ..++||+++.|.-|.|+|+.. .
T Consensus 459 r~G~R~~~vSp-~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny 537 (1080)
T KOG1408|consen 459 RFGFRALAVSP-DGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY 537 (1080)
T ss_pred ccceEEEEECC-CcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccccc
Confidence 45799999999 999999999999999999999998999999999999999986 356899999999999999965 4
Q ss_pred cEEEEEcCCCCCeEEEEEccCC--CEEEEEECCCeEEEEECCC---CceEE--EEcCCCCCeEEEEEecCCCEEEEEeCC
Q psy467 91 TVQRTLNGHKSSITSVDFHPYG--DYLCSGSLDSFIKLWDLRR---KGCIY--TYRGHSKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg--~~Lasgs~DG~I~IWDl~t---~~~l~--~~~~h~~~V~sLafSPdg~~Lasgs~D 163 (845)
.++.++.+|...|+++.|...| ..+++++.|..|.+--.+. +.... +-......+..|+..|..+++++++.|
T Consensus 538 ~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQD 617 (1080)
T KOG1408|consen 538 DLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQD 617 (1080)
T ss_pred chhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecc
Confidence 6778899999999999999877 6889999999876533321 21111 111124568899999999999999999
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
..|+| ||+.+++. ...|++.... .+. .
T Consensus 618 rniri-------------f~i~sgKq--------------------~k~FKgs~~~--eG~--l---------------- 644 (1080)
T KOG1408|consen 618 RNIRI-------------FDIESGKQ--------------------VKSFKGSRDH--EGD--L---------------- 644 (1080)
T ss_pred cceEE-------------Eeccccce--------------------eeeecccccC--CCc--e----------------
Confidence 99999 99999998 6677664332 000 2
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSS 323 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~ 323 (845)
..+...|.|. |+++.+.|.++.++|..+++++.+..||..
T Consensus 645 -----------IKv~lDPSgi-----------------------------Y~atScsdktl~~~Df~sgEcvA~m~GHsE 684 (1080)
T KOG1408|consen 645 -----------IKVILDPSGI-----------------------------YLATSCSDKTLCFVDFVSGECVAQMTGHSE 684 (1080)
T ss_pred -----------EEEEECCCcc-----------------------------EEEEeecCCceEEEEeccchhhhhhcCcch
Confidence 4566777777 999999999999999999999999999999
Q ss_pred CEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 324 TIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 324 ~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
.|+.+.|++|-+.|++.+.|| |.||.+...
T Consensus 685 ~VTG~kF~nDCkHlISvsgDgCIFvW~lp~~ 715 (1080)
T KOG1408|consen 685 AVTGVKFLNDCKHLISVSGDGCIFVWKLPLT 715 (1080)
T ss_pred heeeeeecccchhheeecCCceEEEEECchh
Confidence 999999999999999999999 999998764
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-19 Score=202.31 Aligned_cols=260 Identities=23% Similarity=0.382 Sum_probs=203.8
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecC---CCCCeEEEEEcC-CCCEEEEEECCCcEEEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSG---HSTPVESVQFGN-GEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~---h~~~V~sLafSp-dg~~LaSgs~DGtV~VWD 86 (845)
.+..++|..++ +-..++.++.. .+.||.+... ++...+.. -...+..+.|+. +.++||+++..|.|.+||
T Consensus 39 k~~~nAIs~nr-~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWd 116 (839)
T KOG0269|consen 39 KAKANAISVNR-DINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWD 116 (839)
T ss_pred ccccceEeecC-CcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEe
Confidence 34667788888 77777777754 6788876432 22222221 123456778875 578999999999999999
Q ss_pred CCC---CcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec-CCCEEEEEe
Q psy467 87 LAV---PTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGG 161 (845)
Q Consensus 87 l~t---g~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP-dg~~Lasgs 161 (845)
+.. .+++..|..|+..+++++|++.. .+|++|+.||.|++||++..+-..++.+....|..+.|+| .+..|+++.
T Consensus 117 lnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~ 196 (839)
T KOG0269|consen 117 LNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIH 196 (839)
T ss_pred cCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEec
Confidence 987 56667888899999999999965 6889999999999999999999999998889999999999 578899999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
..|.+++ ||++.... ....+..|.+. |
T Consensus 197 dsG~lql-------------WDlRqp~r-------------------~~~k~~AH~Gp-------V-------------- 223 (839)
T KOG0269|consen 197 DSGYLQL-------------WDLRQPDR-------------------CEKKLTAHNGP-------V-------------- 223 (839)
T ss_pred CCceEEE-------------eeccCchh-------------------HHHHhhcccCc-------e--------------
Confidence 9999999 99987554 13445667666 6
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe--EEEEec
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS--LVSTTE 319 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~--~l~tl~ 319 (845)
.++.|+|++. +|||||.|+.|+|||+.+.+ .+.++.
T Consensus 224 -------------~c~nwhPnr~-----------------------------~lATGGRDK~vkiWd~t~~~~~~~~tIn 261 (839)
T KOG0269|consen 224 -------------LCLNWHPNRE-----------------------------WLATGGRDKMVKIWDMTDSRAKPKHTIN 261 (839)
T ss_pred -------------EEEeecCCCc-----------------------------eeeecCCCccEEEEeccCCCccceeEEe
Confidence 6777777666 99999999999999998653 344444
Q ss_pred CCCCCEEEEEEeCCCCE-EEEEeC--CC-EEEEEecCC-ceEEEecCCCCCeEEEEEc
Q psy467 320 KNSSTIRRLTFSEGGEC-LLGGDT--EG-LKVYGWEPA-RQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 320 gh~~~VtslafSpdG~~-Lasgs~--DG-I~IWDl~tg-k~l~tl~~h~~~VtsVafS 372 (845)
. ..+|.++.|-|+.++ ||+++. |. |+|||+... -...++..|...++.++|.
T Consensus 262 T-iapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~ 318 (839)
T KOG0269|consen 262 T-IAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWD 318 (839)
T ss_pred e-cceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceecc
Confidence 3 468999999998665 555554 34 999999764 3457888999999999998
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.1e-18 Score=176.13 Aligned_cols=250 Identities=17% Similarity=0.277 Sum_probs=184.7
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC----CCeeEEEecCCCCCeEEEEEcC--CCCEEEEEECCCcEEEE
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG----KSNCIMSLSGHSTPVESVQFGN--GEETLSAGCQSGSIKIW 85 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~----t~~~i~~l~~h~~~V~sLafSp--dg~~LaSgs~DGtV~VW 85 (845)
.+|.+-|.|+.|.+ .|+.+|+++.|++|+|||.. +..+....+.|.+.|..+.|.+ -|+.+|+++.|+++.||
T Consensus 10 s~h~DlihdVs~D~-~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iW 88 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDF-YGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIW 88 (361)
T ss_pred cCCcceeeeeeecc-cCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeee
Confidence 47999999999999 99999999999999999963 3456677889999999999976 58999999999999999
Q ss_pred ECCC---------CcEEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCC------ceEEEEc-------CC
Q psy467 86 NLAV---------PTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRK------GCIYTYR-------GH 141 (845)
Q Consensus 86 Dl~t---------g~~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~------~~l~~~~-------~h 141 (845)
.-.. -....++......|+.+.|.|. |-.+|+++.||.++||+.-.. .....+. .+
T Consensus 89 EE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~ 168 (361)
T KOG2445|consen 89 EEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKN 168 (361)
T ss_pred eecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccc
Confidence 7621 1234556667789999999994 668899999999999987542 2222332 35
Q ss_pred CCCeEEEEEecC---CCEEEEEeCC-----CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEE
Q psy467 142 SKSINSIRFSPD---GQWIASGGED-----GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSF 213 (845)
Q Consensus 142 ~~~V~sLafSPd---g~~Lasgs~D-----G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~ 213 (845)
.....|+.|+|. ..+||+|+.+ +.+.| |.......-- ..++.+
T Consensus 169 ~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~I-------------ye~~e~~rKw----------------~kva~L 219 (361)
T KOG2445|consen 169 KQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKI-------------YEYNENGRKW----------------LKVAEL 219 (361)
T ss_pred cCcceEEeeccccccCceEEEEcccCCccccceEE-------------EEecCCccee----------------eeehhc
Confidence 567789999973 4567777665 24444 5443322100 002222
Q ss_pred ecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccce
Q psy467 214 TKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFI 293 (845)
Q Consensus 214 ~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~ 293 (845)
.++ ..+|++++|.|+-.. .|.
T Consensus 220 ~d~----------------------------------------------------------~dpI~di~wAPn~Gr-~y~ 240 (361)
T KOG2445|consen 220 PDH----------------------------------------------------------TDPIRDISWAPNIGR-SYH 240 (361)
T ss_pred CCC----------------------------------------------------------CCcceeeeeccccCC-cee
Confidence 223 345555666555221 234
Q ss_pred EEEEEeCCCeEEEEECCC--------------------CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 294 LTTSSSADRTVNFWDLEK--------------------FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s--------------------~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
+||+++.|| |+||.+.. -+.+..+.+|++.|..+.|+-.|..|++.+.|| ||+|...
T Consensus 241 ~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 241 LLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred eEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 899999999 99999873 134566789999999999999999999999999 9999754
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.2e-17 Score=183.05 Aligned_cols=350 Identities=17% Similarity=0.175 Sum_probs=228.4
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEE--EecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM--SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~--~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.+....+.|++++.+| .++.++.|++||.+..++...++... .+...++.|.+++|+|++..|++|+.||.|++||.
T Consensus 105 ~~d~~gg~IWsiai~p-~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~ 183 (691)
T KOG2048|consen 105 NIDSNGGAIWSIAINP-ENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDV 183 (691)
T ss_pred EecCCCcceeEEEeCC-ccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEc
Confidence 3456678999999999 88999999999988888887776543 34556789999999999999999999999999999
Q ss_pred CCCcEEEEEc-------C-CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 88 AVPTVQRTLN-------G-HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 88 ~tg~~v~~l~-------~-h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
.++..+.... . ...-|+++.|-.++ .|++|...|+|.+||...+..++.++.|.+.|.+++..++++++++
T Consensus 184 ~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfs 262 (691)
T KOG2048|consen 184 KSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFS 262 (691)
T ss_pred CCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEE
Confidence 9987766221 1 22346777777555 7999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCcc------CCCCCCCCCcceeecCC---------------------------
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHP------LGTPPPQYTSSVPFSHN--------------------------- 206 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~------l~~~~~~~i~svs~spd--------------------------- 206 (845)
++.|+.+.. |...+.+. ....+...+++++..++
T Consensus 263 aGvd~~ii~-------------~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s~~~~~~~h~~~ 329 (691)
T KOG2048|consen 263 AGVDPKIIQ-------------YSLTTNKSEWVINSRRDLHAHDVRSMAVIENALISGGRDFTLAICSSREFKNMDHRQK 329 (691)
T ss_pred ccCCCceEE-------------EEecCCccceeeeccccCCcccceeeeeecceEEecceeeEEEEccccccCchhhhcc
Confidence 999999887 33322211 11122333333333322
Q ss_pred --------------CCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh--hccCCCceeEEEcCCCCcCCCCc
Q psy467 207 --------------TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA--TIANPCDYSAIFQPHRSLNRSGT 270 (845)
Q Consensus 207 --------------g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~--~~~~~~~~~l~fspdg~~~~~~~ 270 (845)
.+++..+..|... .|.+......... ....++. ........+.+.+|+|.+..-+.
T Consensus 330 ~~~p~~~~v~~a~~~~L~~~w~~h~v~-------lwrlGS~~~~g~~-~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st 401 (691)
T KOG2048|consen 330 NLFPASDRVSVAPENRLLVLWKAHGVD-------LWRLGSVILQGEY-NYIHLLKLFTKEKENISCAAISPDGNLIAIST 401 (691)
T ss_pred ccccccceeecCccceEEEEecccccc-------ceeccCccccccc-ChhhheeeecCCccceeeeccCCCCCEEEEee
Confidence 2222222222222 3333222111100 0011111 11122336667777777553222
Q ss_pred ccc----------------------cccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCCC--eEEEEec--CCCC
Q psy467 271 CVP----------------------VSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKF--SLVSTTE--KNSS 323 (845)
Q Consensus 271 ~~~----------------------~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~--~~l~tl~--gh~~ 323 (845)
+.. ..-....+.|+-|++ .++..+ .+..+.++++.+. +.+..+. +...
T Consensus 402 ~~~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~-----k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~ 476 (691)
T KOG2048|consen 402 VSRTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKN-----KLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCP 476 (691)
T ss_pred ccceEEEEeccCcceeEEEeccchhhhccceeeEEEecCc-----eEEEEecccceeEEEEecCcchhhhhccccccCCC
Confidence 110 012345666666666 333333 5566666666543 2222222 2356
Q ss_pred CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc---CCceEEEE----EEEEeeC
Q psy467 324 TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT---GTQLWFRR----VGTWSHQ 387 (845)
Q Consensus 324 ~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS---dg~lLaaS----VsiW~~d 387 (845)
.|+.++.|++|+|||+.+..| |.+|++++.+.......-...|++++|+ .++++.+. |.-+.+.
T Consensus 477 ~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~lvvats~nQv~efdi~ 548 (691)
T KOG2048|consen 477 SISRLVVSSDGNYIAAISTRGQIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNRLVVATSNNQVFEFDIE 548 (691)
T ss_pred cceeEEEcCCCCEEEEEeccceEEEEEcccceeecchhccCcceeeeeccccccCcEEEEecCCeEEEEecc
Confidence 799999999999999999999 9999999976554443344788999888 34444443 4444443
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.6e-18 Score=189.47 Aligned_cols=282 Identities=20% Similarity=0.293 Sum_probs=207.8
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCC--EEEEEEC--------
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE--TLSAGCQ-------- 78 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~--~LaSgs~-------- 78 (845)
..++||++.|.||...| .|.+||+|+.||+|+||.+.++.+++++. ..+.|.|++|+|.+. .||++-.
T Consensus 394 lvyrGHtg~Vr~iSvdp-~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp 471 (733)
T KOG0650|consen 394 LVYRGHTGLVRSISVDP-SGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNP 471 (733)
T ss_pred eeEeccCCeEEEEEecC-CcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCc
Confidence 45889999999999999 99999999999999999999999999988 567899999999664 3444322
Q ss_pred ------------------------CCcEEEEECCCCc----EEEEEcCCCCCeEEEEEccCCCEEEEEECC---CeEEEE
Q psy467 79 ------------------------SGSIKIWNLAVPT----VQRTLNGHKSSITSVDFHPYGDYLCSGSLD---SFIKLW 127 (845)
Q Consensus 79 ------------------------DGtV~VWDl~tg~----~v~~l~~h~~~V~~lafspdg~~Lasgs~D---G~I~IW 127 (845)
++.+..|.-...+ -++..-.|...|..+.||..|.||++...+ ..|.|+
T Consensus 472 ~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliH 551 (733)
T KOG0650|consen 472 IFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIH 551 (733)
T ss_pred cccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEE
Confidence 2223344332110 012222378889999999999999987654 468999
Q ss_pred ECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC--CCCCcceeecC
Q psy467 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP--PQYTSSVPFSH 205 (845)
Q Consensus 128 Dl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~--~~~i~svs~sp 205 (845)
++.......-|....+.|.++.|+|...+|++++. ..|++ ||+.....+..+. ..++..++.+|
T Consensus 552 QLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRi-------------YdL~kqelvKkL~tg~kwiS~msihp 617 (733)
T KOG0650|consen 552 QLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRI-------------YDLSKQELVKKLLTGSKWISSMSIHP 617 (733)
T ss_pred ecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEE-------------EehhHHHHHHHHhcCCeeeeeeeecC
Confidence 99877666667667788999999999888888876 57999 9998866654443 56777888888
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
.|..+....-.. .+ +-|..+-....-.....+...+++++|++
T Consensus 618 ~GDnli~gs~d~------k~-------------------------------~WfDldlsskPyk~lr~H~~avr~Va~H~ 660 (733)
T KOG0650|consen 618 NGDNLILGSYDK------KM-------------------------------CWFDLDLSSKPYKTLRLHEKAVRSVAFHK 660 (733)
T ss_pred CCCeEEEecCCC------ee-------------------------------EEEEcccCcchhHHhhhhhhhhhhhhhcc
Confidence 776554422111 11 11111111111122345567788999999
Q ss_pred CCCcccceEEEEEeCCCeEEEEECC------CC---eEEEEecCCCCC----EEEEEEeCCCCEEEEEeCCC-EEEE
Q psy467 286 QSPMLCFILTTSSSADRTVNFWDLE------KF---SLVSTTEKNSST----IRRLTFSEGGECLLGGDTEG-LKVY 348 (845)
Q Consensus 286 dg~~~~~~lLatgs~DG~I~IWDl~------s~---~~l~tl~gh~~~----VtslafSpdG~~Lasgs~DG-I~IW 348 (845)
.-. ++++|+.||++.||.-. .. .++..+.+|... |..+.|+|...+|++++.|| |++|
T Consensus 661 ryP-----Lfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 661 RYP-----LFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred ccc-----eeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 887 99999999999998532 11 356778888544 99999999999999999999 9998
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.9e-18 Score=180.88 Aligned_cols=246 Identities=20% Similarity=0.400 Sum_probs=192.9
Q ss_pred eccCCCcEEEEEEecC-CCCEEEEEeCCCeEEEEECC----------------CCeeEEEecCCCCCeEEEEEcCC-CCE
Q psy467 11 FMAHGASVNCLALGKK-SGQVLATGGDDKKVNLWALG----------------KSNCIMSLSGHSTPVESVQFGNG-EET 72 (845)
Q Consensus 11 L~gH~~~V~~LafSp~-dg~~LaTgs~DG~I~IWdl~----------------t~~~i~~l~~h~~~V~sLafSpd-g~~ 72 (845)
..+|.+.|+.+..++. +..+.|+-+..|.|+||++. ..+++.++.+|...=+.++|||- ...
T Consensus 147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~ 226 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR 226 (440)
T ss_pred ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc
Confidence 3468888888888773 34566677889999999973 23567888999999999999993 234
Q ss_pred EEEEECCCcEEEEECCCCcEE---EEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCC---ceEEEEcCCCCCe
Q psy467 73 LSAGCQSGSIKIWNLAVPTVQ---RTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRK---GCIYTYRGHSKSI 145 (845)
Q Consensus 73 LaSgs~DGtV~VWDl~tg~~v---~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~---~~l~~~~~h~~~V 145 (845)
|++|..-+.|++|...+|.-. ..+.+|+..|..++|+|.. ..|++|+.||+|+|||++.+ .++.+ +.|.+.|
T Consensus 227 LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sDV 305 (440)
T KOG0302|consen 227 LLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSDV 305 (440)
T ss_pred cccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCCce
Confidence 888888899999999887543 3456799999999999965 68899999999999999987 34444 7899999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+.+.|+.+-.+||+|+.||+++| ||+++.+. +..++.|+.|...
T Consensus 306 NVISWnr~~~lLasG~DdGt~~i-------------wDLR~~~~-----------------~~pVA~fk~Hk~p------ 349 (440)
T KOG0302|consen 306 NVISWNRREPLLASGGDDGTLSI-------------WDLRQFKS-----------------GQPVATFKYHKAP------ 349 (440)
T ss_pred eeEEccCCcceeeecCCCceEEE-------------EEhhhccC-----------------CCcceeEEeccCC------
Confidence 99999998889999999999999 99997665 2337888888887
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
| +++.|+|... ..+++++.|..|.
T Consensus 350 -I---------------------------tsieW~p~e~----------------------------s~iaasg~D~Qit 373 (440)
T KOG0302|consen 350 -I---------------------------TSIEWHPHED----------------------------SVIAASGEDNQIT 373 (440)
T ss_pred -e---------------------------eEEEeccccC----------------------------ceEEeccCCCcEE
Confidence 7 7788887765 1788999999999
Q ss_pred EEECCCCe----------------EEEEecCC--CCCEEEEEEeCC-CCEEEEEeCCCEEEEE
Q psy467 306 FWDLEKFS----------------LVSTTEKN--SSTIRRLTFSEG-GECLLGGDTEGLKVYG 349 (845)
Q Consensus 306 IWDl~s~~----------------~l~tl~gh--~~~VtslafSpd-G~~Lasgs~DGI~IWD 349 (845)
+||+..-. +-+.+--| +..+..+.|++. .-+|++.+.||+.||-
T Consensus 374 iWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVfk 436 (440)
T KOG0302|consen 374 IWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVFK 436 (440)
T ss_pred EEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccceeEEE
Confidence 99985311 01111123 346888999885 4478888889977775
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.4e-18 Score=189.47 Aligned_cols=288 Identities=19% Similarity=0.273 Sum_probs=205.7
Q ss_pred CCCcEEE--EEEec--CCCCEEEEEeCCCeEEEEECCCCee------EEEecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 14 HGASVNC--LALGK--KSGQVLATGGDDKKVNLWALGKSNC------IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 14 H~~~V~~--LafSp--~dg~~LaTgs~DG~I~IWdl~t~~~------i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
|.-++.- ..|++ ....+||.+.+||.|.++|...... +..+..|...|..+.|-|....|++++.|.+++
T Consensus 46 ~~~p~pPf~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r 125 (720)
T KOG0321|consen 46 DGLPVPPFADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIR 125 (720)
T ss_pred CCCCCCCccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceee
Confidence 3334444 56654 2456899999999999999865432 245567999999999999778899999999999
Q ss_pred EEECCCCcEEEE--EcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCc---------------------------
Q psy467 84 IWNLAVPTVQRT--LNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKG--------------------------- 133 (845)
Q Consensus 84 VWDl~tg~~v~~--l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~--------------------------- 133 (845)
+||+++.+++.. +.+|.+.|.+++|.|++ ..|++|+.||.|.|||++...
T Consensus 126 ~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~k 205 (720)
T KOG0321|consen 126 PWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKK 205 (720)
T ss_pred eeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhc
Confidence 999999888766 88999999999999966 578999999999999996322
Q ss_pred eEEEEcCCCCCeEE---EEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe
Q psy467 134 CIYTYRGHSKSINS---IRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 134 ~l~~~~~h~~~V~s---LafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
.+...+.+...|.+ +.+..|...||+++. |+.|++ ||++.........+..+..+..
T Consensus 206 r~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKV-------------WDLRk~~~~~r~ep~~~~~~~t------ 266 (720)
T KOG0321|consen 206 RIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKV-------------WDLRKNYTAYRQEPRGSDKYPT------ 266 (720)
T ss_pred cccccccccCceeeeeEEEEEeccceeeeccCCCcceEE-------------EeecccccccccCCCcccCccC------
Confidence 11122234455555 666778899999887 999999 9999776622211111100000
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCc
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~ 289 (845)
+. ...+.+ .++.....|.
T Consensus 267 ------~s----krs~G~---------------------------~nL~lDssGt------------------------- 284 (720)
T KOG0321|consen 267 ------HS----KRSVGQ---------------------------VNLILDSSGT------------------------- 284 (720)
T ss_pred ------cc----cceeee---------------------------EEEEecCCCC-------------------------
Confidence 00 000001 3333433344
Q ss_pred ccceEEEEEeCCCeEEEEECCCC--eEEEEecCCCC--CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce-EEEecCCC
Q psy467 290 LCFILTTSSSADRTVNFWDLEKF--SLVSTTEKNSS--TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ-YDAQPMGW 363 (845)
Q Consensus 290 ~~~~lLatgs~DG~I~IWDl~s~--~~l~tl~gh~~--~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~-l~tl~~h~ 363 (845)
+|.+.+.|+.|++||+.+. .++..+.++.. .-..-..+||+.+|++|+.|. .++|.+.+.+. ...+.+|.
T Consensus 285 ----~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght 360 (720)
T KOG0321|consen 285 ----YLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHT 360 (720)
T ss_pred ----eEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcc
Confidence 6666677999999999764 34555555422 122334689999999999999 99999988653 56778999
Q ss_pred CCeEEEEEc---CCceEEEE----EEEEee
Q psy467 364 GKVQDLAVT---GTQLWFRR----VGTWSH 386 (845)
Q Consensus 364 ~~VtsVafS---dg~lLaaS----VsiW~~ 386 (845)
-.|++++|. .+..++++ +.+|.+
T Consensus 361 ~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l 390 (720)
T KOG0321|consen 361 REVTTVRWLPSATTPVATCSDDFRVKIWRL 390 (720)
T ss_pred eEEEEEeeccccCCCceeeccCcceEEEec
Confidence 999999999 56666666 999976
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.1e-16 Score=167.87 Aligned_cols=283 Identities=32% Similarity=0.558 Sum_probs=222.8
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-eEEEecCCC-CCeEEEEE-cCCCC-EEEEEEC-CCcEEE
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-CIMSLSGHS-TPVESVQF-GNGEE-TLSAGCQ-SGSIKI 84 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-~i~~l~~h~-~~V~sLaf-Spdg~-~LaSgs~-DGtV~V 84 (845)
.+.+|...|.++.+.+ .+..++.++.|+.+.+|+...+. .+..+..+. ..+..+.+ ++++. .++..+. |+.+.+
T Consensus 60 ~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 138 (466)
T COG2319 60 LLRGHEDSITSIAFSP-DGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKL 138 (466)
T ss_pred eeeeccceEEEEEECC-CCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEE
Confidence 4678999999999999 89999999999999999998876 667776644 37788877 78887 5555444 899999
Q ss_pred EECCC-CcEEEEEcCCCCCeEEEEEccCCCEEEEEEC-CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCC-EEEEEe
Q psy467 85 WNLAV-PTVQRTLNGHKSSITSVDFHPYGDYLCSGSL-DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ-WIASGG 161 (845)
Q Consensus 85 WDl~t-g~~v~~l~~h~~~V~~lafspdg~~Lasgs~-DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~-~Lasgs 161 (845)
|+... ......+..|...|..++|+|++..+++++. |+.+++|++..+..+..+..|...+.+++|+|++. .+++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 218 (466)
T COG2319 139 WDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGS 218 (466)
T ss_pred EEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEec
Confidence 99998 7888888899999999999999998888885 99999999998889999998999999999999998 555558
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEE-EEecCCCCCccceeeEeeecccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRK-SFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~-~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
.|+.+.+ ||...+.. +. .+.+|...
T Consensus 219 ~d~~i~~-------------wd~~~~~~--------------------~~~~~~~~~~~--------------------- 244 (466)
T COG2319 219 SDGTIRL-------------WDLSTGKL--------------------LRSTLSGHSDS--------------------- 244 (466)
T ss_pred CCCcEEE-------------EECCCCcE--------------------EeeecCCCCcc---------------------
Confidence 9999999 98775444 32 23222222
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE-EEEec
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL-VSTTE 319 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~-l~tl~ 319 (845)
....|++++. ++++++.|+.+++||+..... +..+.
T Consensus 245 --------------~~~~~~~~~~-----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~ 281 (466)
T COG2319 245 --------------VVSSFSPDGS-----------------------------LLASGSSDGTIRLWDLRSSSSLLRTLS 281 (466)
T ss_pred --------------eeEeECCCCC-----------------------------EEEEecCCCcEEEeeecCCCcEEEEEe
Confidence 1003444443 788999999999999987654 55556
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec--CCCCCeEEEEEc-CCceEEEE------EEEEeeCCC
Q psy467 320 KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP--MGWGKVQDLAVT-GTQLWFRR------VGTWSHQDS 389 (845)
Q Consensus 320 gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~--~h~~~VtsVafS-dg~lLaaS------VsiW~~d~~ 389 (845)
+|...|.++.|+|++..+++++.|+ +++|+..+........ .|...+..+.|. ++..++.+ +.+|.....
T Consensus 282 ~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 361 (466)
T COG2319 282 GHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTG 361 (466)
T ss_pred cCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCC
Confidence 7889999999999989998888888 9999998887776665 787889999995 22334333 555765444
Q ss_pred C
Q psy467 390 G 390 (845)
Q Consensus 390 ~ 390 (845)
.
T Consensus 362 ~ 362 (466)
T COG2319 362 K 362 (466)
T ss_pred c
Confidence 3
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.6e-18 Score=190.05 Aligned_cols=272 Identities=16% Similarity=0.217 Sum_probs=198.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCC-CCEEEEEECCCcEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS--LSGHSTPVESVQFGNG-EETLSAGCQSGSIKI 84 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpd-g~~LaSgs~DGtV~V 84 (845)
++.+..|...|..+.|-| ....|++++.|.++++||+++.+++.. +.+|...|.+++|.+. ...|++|+.||.|.|
T Consensus 93 lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~ill 171 (720)
T KOG0321|consen 93 LKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILL 171 (720)
T ss_pred hcccccccceeEeeccCC-CceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEE
Confidence 456778999999999999 888999999999999999999888876 8899999999999994 567899999999999
Q ss_pred EECCCCc--------------------E-------EEEEcCCCCCeEE---EEEccCCCEEEEEEC-CCeEEEEECCCCc
Q psy467 85 WNLAVPT--------------------V-------QRTLNGHKSSITS---VDFHPYGDYLCSGSL-DSFIKLWDLRRKG 133 (845)
Q Consensus 85 WDl~tg~--------------------~-------v~~l~~h~~~V~~---lafspdg~~Lasgs~-DG~I~IWDl~t~~ 133 (845)
||++... . +.....+...|.. +.+..|...||+++. |+.|+|||++...
T Consensus 172 WD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~ 251 (720)
T KOG0321|consen 172 WDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNY 251 (720)
T ss_pred EEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccc
Confidence 9986322 0 0111123334444 556678889999887 9999999998654
Q ss_pred eEEEE--------cCC---CCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCccee
Q psy467 134 CIYTY--------RGH---SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202 (845)
Q Consensus 134 ~l~~~--------~~h---~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs 202 (845)
..... ..| ...+.++..+..|.+|++.+.|+.|++ |++.+...
T Consensus 252 ~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~-------------ynm~s~s~------------- 305 (720)
T KOG0321|consen 252 TAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYF-------------YNMRSLSI------------- 305 (720)
T ss_pred cccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEE-------------EeccccCc-------------
Confidence 43221 112 335777888888899999899999999 99986544
Q ss_pred ecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE
Q psy467 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282 (845)
Q Consensus 203 ~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla 282 (845)
+| ++.+.++... .+. ..-..+|++.
T Consensus 306 -sP----~~~~sg~~~~----sf~----------------------------vks~lSpd~~------------------ 330 (720)
T KOG0321|consen 306 -SP----VAEFSGKLNS----SFY----------------------------VKSELSPDDC------------------ 330 (720)
T ss_pred -Cc----hhhccCcccc----eee----------------------------eeeecCCCCc------------------
Confidence 11 2233332211 000 2223455555
Q ss_pred EcCCCCcccceEEEEEeCCCeEEEEECCCCe-EEEEecCCCCCEEEEEEeCC-CCEEEEEeCCC-EEEEEecCCc-----
Q psy467 283 ILPQSPMLCFILTTSSSADRTVNFWDLEKFS-LVSTTEKNSSTIRRLTFSEG-GECLLGGDTEG-LKVYGWEPAR----- 354 (845)
Q Consensus 283 fSPdg~~~~~~lLatgs~DG~I~IWDl~s~~-~l~tl~gh~~~VtslafSpd-G~~Lasgs~DG-I~IWDl~tgk----- 354 (845)
++++|+.|...++|.+.+.+ ....+.+|...|++++|.|. -.-++++++|. ++||++..+-
T Consensus 331 -----------~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l~e~~~ 399 (720)
T KOG0321|consen 331 -----------SLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGLEEIYA 399 (720)
T ss_pred -----------eEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCchhhccc
Confidence 99999999999999998764 45667799999999999873 22355568888 9999997642
Q ss_pred ---------eEEEecCCCCCeEEEEEc
Q psy467 355 ---------QYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 355 ---------~l~tl~~h~~~VtsVafS 372 (845)
....+++|.-.+..+.++
T Consensus 400 adk~s~v~~~~~rfk~~~p~~~nv~ss 426 (720)
T KOG0321|consen 400 ADKDSIVYEYSRRFKGHLPQVLNVNSS 426 (720)
T ss_pred cccchhhhhhhhhhhcccccccccccc
Confidence 123345666666666665
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-17 Score=180.32 Aligned_cols=280 Identities=16% Similarity=0.203 Sum_probs=206.4
Q ss_pred EEeccCCCcEEEEEEecCCC-CEEEEEeCCCeEEEEECCC----CeeEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcE
Q psy467 9 EDFMAHGASVNCLALGKKSG-QVLATGGDDKKVNLWALGK----SNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSI 82 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg-~~LaTgs~DG~I~IWdl~t----~~~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV 82 (845)
...+-|.+.|++++|+|... +++|+|..-|.|-+||+.+ ..-+..+..|..+|.+|.|+| +...+++.+.||+|
T Consensus 180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGti 259 (498)
T KOG4328|consen 180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTI 259 (498)
T ss_pred ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCcee
Confidence 45677999999999999544 6899999999999999942 234566788999999999999 55688999999999
Q ss_pred EEEECCCCcE--EEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-EEEEcCCCCCeEEEEEecC-CCEEE
Q psy467 83 KIWNLAVPTV--QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC-IYTYRGHSKSINSIRFSPD-GQWIA 158 (845)
Q Consensus 83 ~VWDl~tg~~--v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~-l~~~~~h~~~V~sLafSPd-g~~La 158 (845)
++-|++.+.. +.........+..+.|+.+...++.++.=|...+||.+++.. ...+.-|...|.+++++|- ..+||
T Consensus 260 R~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~la 339 (498)
T KOG4328|consen 260 RLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLA 339 (498)
T ss_pred eeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchhee
Confidence 9999987643 333333455677888988888888888888999999998665 5666778889999999995 45699
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+++.|++.+| ||++....-.. | +.....|.
T Consensus 340 T~s~D~T~kI-------------WD~R~l~~K~s------------p----~lst~~Hr--------------------- 369 (498)
T KOG4328|consen 340 TASLDQTAKI-------------WDLRQLRGKAS------------P----FLSTLPHR--------------------- 369 (498)
T ss_pred ecccCcceee-------------eehhhhcCCCC------------c----ceeccccc---------------------
Confidence 9999999999 99986544110 0 11111222
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC----CCeE
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE----KFSL 314 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~----s~~~ 314 (845)
..|.+..|||.+. .|+|.+.|..|+|||.. ...+
T Consensus 370 -------------------------------------rsV~sAyFSPs~g-----tl~TT~~D~~IRv~dss~~sa~~~p 407 (498)
T KOG4328|consen 370 -------------------------------------RSVNSAYFSPSGG-----TLLTTCQDNEIRVFDSSCISAKDEP 407 (498)
T ss_pred -------------------------------------ceeeeeEEcCCCC-----ceEeeccCCceEEeecccccccCCc
Confidence 2345555555555 79999999999999983 3344
Q ss_pred EEEecC---CCCC--EEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCC-CeEEE-EEcCCce-EEEE
Q psy467 315 VSTTEK---NSST--IRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWG-KVQDL-AVTGTQL-WFRR 380 (845)
Q Consensus 315 l~tl~g---h~~~--VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~-~VtsV-afSdg~l-LaaS 380 (845)
..++.. +..+ .....|.|+..++++|-.-. |-|+|-..++.+..+..... .|.++ .|++-+. ++++
T Consensus 408 ~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG 482 (498)
T KOG4328|consen 408 LGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAG 482 (498)
T ss_pred cceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceecc
Confidence 444441 1122 34568999999999999888 99999988887877655433 55554 6773333 4444
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-17 Score=174.14 Aligned_cols=233 Identities=18% Similarity=0.256 Sum_probs=172.4
Q ss_pred eEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC
Q psy467 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 61 V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~ 140 (845)
-.|+.|++.|.+||+|+.+|.|.|||+.+...-+.+.+|..+|++++||+||+.|++++.|..|.+||+..|.+++.+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir- 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR- 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence 7899999999999999999999999999999888899999999999999999999999999999999999999999987
Q ss_pred CCCCeEEEEEecCCC-EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCC
Q psy467 141 HSKSINSIRFSPDGQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPG 219 (845)
Q Consensus 141 h~~~V~sLafSPdg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~ 219 (845)
...+|+...|+|... ..++.-.+..-.+ .++...+. .+
T Consensus 105 f~spv~~~q~hp~k~n~~va~~~~~sp~v-------------i~~s~~~h----------------------~~------ 143 (405)
T KOG1273|consen 105 FDSPVWGAQWHPRKRNKCVATIMEESPVV-------------IDFSDPKH----------------------SV------ 143 (405)
T ss_pred ccCccceeeeccccCCeEEEEEecCCcEE-------------EEecCCce----------------------ee------
Confidence 788999999999433 3332222222333 33332111 10
Q ss_pred CccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe
Q psy467 220 GTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS 299 (845)
Q Consensus 220 ~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs 299 (845)
+..++++.. ...-.+..|.+.|+ ++.+|.
T Consensus 144 -------------------------------------Lp~d~d~dl---------n~sas~~~fdr~g~-----yIitGt 172 (405)
T KOG1273|consen 144 -------------------------------------LPKDDDGDL---------NSSASHGVFDRRGK-----YIITGT 172 (405)
T ss_pred -------------------------------------ccCCCcccc---------ccccccccccCCCC-----EEEEec
Confidence 111111110 00000113444444 999999
Q ss_pred CCCeEEEEECCCCeEEEEecCCC-CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC----c--eE---EEec--CCCCCe
Q psy467 300 ADRTVNFWDLEKFSLVSTTEKNS-STIRRLTFSEGGECLLGGDTEG-LKVYGWEPA----R--QY---DAQP--MGWGKV 366 (845)
Q Consensus 300 ~DG~I~IWDl~s~~~l~tl~gh~-~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg----k--~l---~tl~--~h~~~V 366 (845)
..|.+.+||..+.+++..++-.. ..|..+.|+..|++|+.-+.|. ||.|++..- + .+ ..+. ...-.=
T Consensus 173 sKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~W 252 (405)
T KOG1273|consen 173 SKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQW 252 (405)
T ss_pred CcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhh
Confidence 99999999999999998888654 7899999999999999999999 999997631 1 11 1111 011223
Q ss_pred EEEEEc-CCceEEEE------EEEEee
Q psy467 367 QDLAVT-GTQLWFRR------VGTWSH 386 (845)
Q Consensus 367 tsVafS-dg~lLaaS------VsiW~~ 386 (845)
.+++|| +|.++.++ +.+|-.
T Consensus 253 k~ccfs~dgeYv~a~s~~aHaLYIWE~ 279 (405)
T KOG1273|consen 253 KKCCFSGDGEYVCAGSARAHALYIWEK 279 (405)
T ss_pred hheeecCCccEEEeccccceeEEEEec
Confidence 467888 99999888 889943
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.6e-18 Score=182.54 Aligned_cols=243 Identities=19% Similarity=0.326 Sum_probs=184.3
Q ss_pred EEEEEec------CCCCEEEEEeCCCeEEEEECCCCe---eE------------------EEecCCCCCeEEEEEcCC-C
Q psy467 19 NCLALGK------KSGQVLATGGDDKKVNLWALGKSN---CI------------------MSLSGHSTPVESVQFGNG-E 70 (845)
Q Consensus 19 ~~LafSp------~dg~~LaTgs~DG~I~IWdl~t~~---~i------------------~~l~~h~~~V~sLafSpd-g 70 (845)
.|++|.- ..|+++|.|+.|..|.|||+.-.. +. ....+|++.|.+++|+.+ .
T Consensus 177 LC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~ 256 (463)
T KOG0270|consen 177 LCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFR 256 (463)
T ss_pred hhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccc
Confidence 5666632 146899999999999999984211 11 112369999999999875 4
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEE
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLa 149 (845)
+.||+|+.|.+|++||+.++++..++..|.+.|+++.|+|.. .+|++|+.|++|.+.|.+........-...+.|-.++
T Consensus 257 nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~ 336 (463)
T KOG0270|consen 257 NVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVA 336 (463)
T ss_pred eeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEE
Confidence 678999999999999999999999999999999999999965 6889999999999999985333322223567899999
Q ss_pred EecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC-ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeE
Q psy467 150 FSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV-HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 150 fSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg-~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
|.|. ...++++..||.++- +|+++. ++ +.++..|... |
T Consensus 337 w~~~se~~f~~~tddG~v~~-------------~D~R~~~~~--------------------vwt~~AHd~~-------I 376 (463)
T KOG0270|consen 337 WDPHSENSFFVSTDDGTVYY-------------FDIRNPGKP--------------------VWTLKAHDDE-------I 376 (463)
T ss_pred ecCCCceeEEEecCCceEEe-------------eecCCCCCc--------------------eeEEEeccCC-------c
Confidence 9995 456888889999999 999865 44 7777788777 6
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEE
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IW 307 (845)
..++++..-. +++++++.|+.|++|
T Consensus 377 ---------------------------Sgl~~n~~~p----------------------------~~l~t~s~d~~Vklw 401 (463)
T KOG0270|consen 377 ---------------------------SGLSVNIQTP----------------------------GLLSTASTDKVVKLW 401 (463)
T ss_pred ---------------------------ceEEecCCCC----------------------------cceeeccccceEEEE
Confidence 6666665544 289999999999999
Q ss_pred ECCCCeEEEEe--cCCCCCEEEEEEeCCCC-EEEEEeCCC-EEEEEecCCceE
Q psy467 308 DLEKFSLVSTT--EKNSSTIRRLTFSEGGE-CLLGGDTEG-LKVYGWEPARQY 356 (845)
Q Consensus 308 Dl~s~~~l~tl--~gh~~~VtslafSpdG~-~Lasgs~DG-I~IWDl~tgk~l 356 (845)
++.......+. .-.-+...|+++.|+-. ++|.|+..+ ++|||+.+...+
T Consensus 402 ~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 402 KFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred eecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence 98654332111 11123466777778644 567777777 999999886544
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.5e-17 Score=167.98 Aligned_cols=252 Identities=18% Similarity=0.322 Sum_probs=183.0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC----cEEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEEEEE
Q psy467 55 SGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP----TVQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 55 ~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg----~~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWD 128 (845)
.+|.+-|.++.|.+.|+.+|+|+.|++|+|||.... .+....+.|.+.|..+.|.+ -|+.+|+++.|+++.||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 468899999999999999999999999999996543 45566788999999999976 589999999999999997
Q ss_pred CC---------CCceEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC-CC
Q psy467 129 LR---------RKGCIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQ 196 (845)
Q Consensus 129 l~---------t~~~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~ 196 (845)
-. ......++......|+.+.|.|. |-.+|+++.||.++| |+......+..-. ..
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRI-------------YEA~dp~nLs~W~Lq~ 156 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRI-------------YEAPDPMNLSQWTLQH 156 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEE-------------EecCCccccccchhhh
Confidence 52 12234566677889999999994 678999999999999 7654332211000 00
Q ss_pred CCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccccccc
Q psy467 197 YTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSV 276 (845)
Q Consensus 197 ~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~ 276 (845)
.+..+ ..|-++ +. ....++.|++...
T Consensus 157 Ei~~~-~~pp~~-------~~----------------------------------~~~~CvsWn~sr~------------ 182 (361)
T KOG2445|consen 157 EIQNV-IDPPGK-------NK----------------------------------QPCFCVSWNPSRM------------ 182 (361)
T ss_pred hhhhc-cCCccc-------cc----------------------------------CcceEEeeccccc------------
Confidence 00000 000000 00 0004555554332
Q ss_pred CceeEEEcCCCCcccceEEEEEeCC-----CeEEEEECCC----CeEEEEecCCCCCEEEEEEeCC----CCEEEEEeCC
Q psy467 277 SRTSLSILPQSPMLCFILTTSSSAD-----RTVNFWDLEK----FSLVSTTEKNSSTIRRLTFSEG----GECLLGGDTE 343 (845)
Q Consensus 277 ~I~slafSPdg~~~~~~lLatgs~D-----G~I~IWDl~s----~~~l~tl~gh~~~VtslafSpd----G~~Lasgs~D 343 (845)
..+ +||+|+.+ +.+.||.... ...+.++.+|..+|++++|.|+ -..||+++.|
T Consensus 183 ---------~~p-----~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kD 248 (361)
T KOG2445|consen 183 ---------HEP-----LIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKD 248 (361)
T ss_pred ---------cCc-----eEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecC
Confidence 011 78888765 4788987644 3456678899999999999995 3579999999
Q ss_pred CEEEEEecCC--------------------ceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 344 GLKVYGWEPA--------------------RQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 344 GI~IWDl~tg--------------------k~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
||+||.+... +.+..+..|.+.|+.+.|. .|..|+.+ |+.|...
T Consensus 249 gv~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 249 GVRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred cEEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 9999998731 3456678899999999999 88888877 9999654
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=180.48 Aligned_cols=278 Identities=19% Similarity=0.270 Sum_probs=207.6
Q ss_pred cceeeeeEEec------cCC--CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC--eeEEEecCCCCCeEEEEEcCCCC
Q psy467 2 RAKVEKAEDFM------AHG--ASVNCLALGKKSGQVLATGGDDKKVNLWALGKS--NCIMSLSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 2 ~irlw~l~~L~------gH~--~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~i~~l~~h~~~V~sLafSpdg~ 71 (845)
++++|++..+. .|. -.|.++.|+..+--.+|+.+.|..|++|.-... +....-......-.|++......
T Consensus 13 ~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S~ 92 (673)
T KOG4378|consen 13 KTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQSL 92 (673)
T ss_pred ceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhcce
Confidence 46788865433 232 259999998722223334467888999975332 12111111222344555555558
Q ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCC-CCCeEEEEE
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH-SKSINSIRF 150 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h-~~~V~sLaf 150 (845)
|+++|+..+.|+|||++...+.+.+++|...|+++.++-...+||+++..|.|.|..+.++.....|... ...|.-+.|
T Consensus 93 y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~y 172 (673)
T KOG4378|consen 93 YEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRY 172 (673)
T ss_pred eeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeec
Confidence 9999999999999999977777888999999999999999999999999999999999998887788755 345668999
Q ss_pred ecCCCE-EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE-EecCCCCCccceeeEe
Q psy467 151 SPDGQW-IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS-FTKGRPGGTKAKIDVT 228 (845)
Q Consensus 151 SPdg~~-Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~-~~~h~~~~~~~~i~V~ 228 (845)
+|..++ |.+++.+|.|.+ ||+....+ +.. ...|..+
T Consensus 173 s~skr~lL~~asd~G~Vtl-------------wDv~g~sp--------------------~~~~~~~HsAP--------- 210 (673)
T KOG4378|consen 173 SPSKRFLLSIASDKGAVTL-------------WDVQGMSP--------------------IFHASEAHSAP--------- 210 (673)
T ss_pred ccccceeeEeeccCCeEEE-------------EeccCCCc--------------------ccchhhhccCC---------
Confidence 997665 667899999999 99986655 211 1223222
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEE
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWD 308 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWD 308 (845)
...++|+|.... +|++.+.|..|.+||
T Consensus 211 -------------------------------------------------~~gicfspsne~----l~vsVG~Dkki~~yD 237 (673)
T KOG4378|consen 211 -------------------------------------------------CRGICFSPSNEA----LLVSVGYDKKINIYD 237 (673)
T ss_pred -------------------------------------------------cCcceecCCccc----eEEEecccceEEEee
Confidence 233445554443 899999999999999
Q ss_pred CCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC-ceEEEecCCCCCeEEEEEcCCc
Q psy467 309 LEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA-RQYDAQPMGWGKVQDLAVTGTQ 375 (845)
Q Consensus 309 l~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg-k~l~tl~~h~~~VtsVafSdg~ 375 (845)
....+...++.. ..+.+.++|+++|.+|+.|...| |..||+..- ..+.++..|...|++++|-...
T Consensus 238 ~~s~~s~~~l~y-~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 238 IRSQASTDRLTY-SHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred cccccccceeee-cCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 998777666653 56899999999999999999999 999999864 5678899999999999998544
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.5e-17 Score=186.88 Aligned_cols=235 Identities=18% Similarity=0.234 Sum_probs=193.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc
Q psy467 55 SGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133 (845)
Q Consensus 55 ~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg-~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~ 133 (845)
..|+..-+.|+|.|+|++|++++.||.|++|+..+. +.-.++..+...|.+++.. +.+|++|+.+++|.+|.+.++.
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~ 87 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGE 87 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCCC
Confidence 358888999999999999999999999999998765 3334444366667776654 5699999999999999998876
Q ss_pred eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEE
Q psy467 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSF 213 (845)
Q Consensus 134 ~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~ 213 (845)
.-..+....-++.+++++.+|+++|.|+.|-.|++ .++..... ...+
T Consensus 88 ~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~-------------~~~~D~s~--------------------~~~l 134 (933)
T KOG1274|consen 88 EDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKL-------------LNLDDSSQ--------------------EKVL 134 (933)
T ss_pred ccceeeeeeccceEEEEecCCcEEEeecCceeEEE-------------Eeccccch--------------------heee
Confidence 65455555678999999999999999999999999 77776665 6667
Q ss_pred ecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccce
Q psy467 214 TKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFI 293 (845)
Q Consensus 214 ~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~ 293 (845)
.+|... | .++.|+|.+.
T Consensus 135 rgh~ap-------V---------------------------l~l~~~p~~~----------------------------- 151 (933)
T KOG1274|consen 135 RGHDAP-------V---------------------------LQLSYDPKGN----------------------------- 151 (933)
T ss_pred cccCCc-------e---------------------------eeeeEcCCCC-----------------------------
Confidence 778777 6 7777777777
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCC--------CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC--C
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKN--------SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM--G 362 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh--------~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~--h 362 (845)
+||+.+.||.|++||+.++.+..++.+- ...+..++|+|+|..+++...|+ |++|+..++.....+.. +
T Consensus 152 fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ 231 (933)
T KOG1274|consen 152 FLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLS 231 (933)
T ss_pred EEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeeccccc
Confidence 9999999999999999999887776532 34678899999977777777777 99999999888777754 4
Q ss_pred CCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 363 WGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 363 ~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
...+.++.|+ .|+|||++ |.+|.++
T Consensus 232 ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 232 SSKFSDLQWSPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred ccceEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence 4559999999 99999999 9999887
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.8e-17 Score=167.35 Aligned_cols=261 Identities=15% Similarity=0.249 Sum_probs=190.5
Q ss_pred cceeeeeEEec--cCC--------CcEEEEEEecCCCCEEEEEeCCCeEEEEECCC---CeeEE---------EecCCCC
Q psy467 2 RAKVEKAEDFM--AHG--------ASVNCLALGKKSGQVLATGGDDKKVNLWALGK---SNCIM---------SLSGHST 59 (845)
Q Consensus 2 ~irlw~l~~L~--gH~--------~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t---~~~i~---------~l~~h~~ 59 (845)
.||+|+++.|. .|. +.-+.++|+|+...+++..-...++++|.... |.... --..|.-
T Consensus 109 ~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v 188 (420)
T KOG2096|consen 109 SIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQV 188 (420)
T ss_pred eEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhccc
Confidence 47899987654 332 35678999996666666666667899998742 22111 1123667
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEEC---CCC----
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL---RRK---- 132 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl---~t~---- 132 (845)
.|..+-...++.+|++++.|..|.+|++. |+.+..+......-+..+.+|+|+++++++..-.|++|.+ +.|
T Consensus 189 ~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqe 267 (420)
T KOG2096|consen 189 DIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQE 267 (420)
T ss_pred ceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhh
Confidence 78888888889999999999999999999 8999988877777788899999999999999999999987 223
Q ss_pred -ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEE
Q psy467 133 -GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRK 211 (845)
Q Consensus 133 -~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~ 211 (845)
..+..+++|...|..++|+++...+++++.||++++ ||..-.-... .|.+.+.
T Consensus 268 v~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wri-------------wdtdVrY~~~-------------qDpk~Lk 321 (420)
T KOG2096|consen 268 VKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRI-------------WDTDVRYEAG-------------QDPKILK 321 (420)
T ss_pred hhhhheeccchhheeeeeeCCCcceeEEEecCCcEEE-------------eeccceEecC-------------CCchHhh
Confidence 245678899999999999999999999999999999 9976221100 0001111
Q ss_pred EEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCccc
Q psy467 212 SFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLC 291 (845)
Q Consensus 212 ~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~ 291 (845)
.... . .... ......++++|.|+
T Consensus 322 ~g~~---p---------------------------------------l~aa------------g~~p~RL~lsP~g~--- 344 (420)
T KOG2096|consen 322 EGSA---P---------------------------------------LHAA------------GSEPVRLELSPSGD--- 344 (420)
T ss_pred cCCc---c---------------------------------------hhhc------------CCCceEEEeCCCCc---
Confidence 1000 0 0000 01112455555555
Q ss_pred ceEEEEEeCCCeEEEEECCCCeEEEEec-CCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Q psy467 292 FILTTSSSADRTVNFWDLEKFSLVSTTE-KNSSTIRRLTFSEGGECLLGGDTEGLKVYG 349 (845)
Q Consensus 292 ~~lLatgs~DG~I~IWDl~s~~~l~tl~-gh~~~VtslafSpdG~~Lasgs~DGI~IWD 349 (845)
.||... ...+++|..++++...++. .|...|++++|+++|++++++++..++++.
T Consensus 345 --~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGdr~vrv~~ 400 (420)
T KOG2096|consen 345 --SLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGDRYVRVIR 400 (420)
T ss_pred --EEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecceeeeeec
Confidence 566543 4579999999998877776 488999999999999999999887777765
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-16 Score=179.00 Aligned_cols=357 Identities=17% Similarity=0.235 Sum_probs=237.3
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe----e---EEEecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN----C---IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~----~---i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
+.||++.|.++.|+| .+..|++++.|.++.+|...+.. . +..+.+....-...-|+|+++.+++-+..|..+
T Consensus 263 l~GHeDWV~sv~W~p-~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~h 341 (764)
T KOG1063|consen 263 LMGHEDWVYSVWWHP-EGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFH 341 (764)
T ss_pred hcCcccceEEEEEcc-chhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEE
Confidence 349999999999999 88889999999999999876542 1 222334456788999999999999999999999
Q ss_pred EEECCCC---cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC----ceEEEEcCCCCCeEEEEEecCCCE
Q psy467 84 IWNLAVP---TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK----GCIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 84 VWDl~tg---~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~----~~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
+|...+. .+...+.+|.+.|++++|+|.|.+|++.+.|.+-+++-.-.. ..+..-.-|...++|++|-+....
T Consensus 342 lWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~ 421 (764)
T KOG1063|consen 342 LWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQ 421 (764)
T ss_pred EEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCce
Confidence 9994332 344556899999999999999999999999999999865411 223333458888999999986666
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCC----------CccC---CC-CCCCCCcceeecCCCCeE-EEEecCCCCCc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSL----------VHPL---GT-PPPQYTSSVPFSHNTSLR-KSFTKGRPGGT 221 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t----------g~~l---~~-~~~~~i~svs~spdg~~l-~~~~~h~~~~~ 221 (845)
+++|.+...+++ |+... +.+. .. +....+..+.+|...-.. .+-.+......
T Consensus 422 FVSgAdEKVlRv-------------F~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~ 488 (764)
T KOG1063|consen 422 FVSGADEKVLRV-------------FEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVC 488 (764)
T ss_pred eeecccceeeee-------------ecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCccccccccccccee
Confidence 888888888888 55432 1000 00 001222223333221111 00000000000
Q ss_pred cce---eeEeeecccccccccccchhhhh---hc--cCCCceeEEEcCCCCcC-----------------------CCCc
Q psy467 222 KAK---IDVTRIEENAESEDQAGEEELFA---TI--ANPCDYSAIFQPHRSLN-----------------------RSGT 270 (845)
Q Consensus 222 ~~~---i~V~~i~~~~~~~~~~~~~~l~~---~~--~~~~~~~l~fspdg~~~-----------------------~~~~ 270 (845)
... ...-.+. .+...++.....+|- .+ .+-...+++.+|++.+. ....
T Consensus 489 ~et~~~~~p~~L~-ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~ 567 (764)
T KOG1063|consen 489 AETPLAAAPCELT-EPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQE 567 (764)
T ss_pred eecccccCchhcc-CCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhhe
Confidence 000 0000000 011112111111111 11 11234777778777633 2233
Q ss_pred ccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe----EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-E
Q psy467 271 CVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS----LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-L 345 (845)
Q Consensus 271 ~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~----~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I 345 (845)
...|.-.|+.++|||||+ +|++.+.|+++.+|...... .....+.|..-|.++.|+|++.++||++.|. |
T Consensus 568 L~~HsLTVT~l~FSpdg~-----~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~V 642 (764)
T KOG1063|consen 568 LEGHSLTVTRLAFSPDGR-----YLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKV 642 (764)
T ss_pred ecccceEEEEEEECCCCc-----EEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceE
Confidence 455677889999999999 99999999999999875432 1233668999999999999999999999999 9
Q ss_pred EEEEecCC--ceEEE--ecCCCCCeEEEEEc--CC----ceEEEE-----EEEEeeC
Q psy467 346 KVYGWEPA--RQYDA--QPMGWGKVQDLAVT--GT----QLWFRR-----VGTWSHQ 387 (845)
Q Consensus 346 ~IWDl~tg--k~l~t--l~~h~~~VtsVafS--dg----~lLaaS-----VsiW~~d 387 (845)
+||..... +.+.. ...+...|++++|. +. .+++++ +.+|...
T Consensus 643 kVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 643 KVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred EEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 99999887 44433 34578899999998 32 367777 7788754
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.1e-17 Score=165.74 Aligned_cols=247 Identities=18% Similarity=0.309 Sum_probs=195.3
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC---CCCEEEEEECCCcEEEEECC
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN---GEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp---dg~~LaSgs~DGtV~VWDl~ 88 (845)
.+|.-.|.++.|-|-+.-++.+++.|.+++|||..+.+....++ ..+.|++-++|| ...++|+|..+-.|++-|+.
T Consensus 98 ~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~ 176 (397)
T KOG4283|consen 98 NGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA 176 (397)
T ss_pred ccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEecc
Confidence 36888999999999787889999999999999999988888877 567799999998 34578889899999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCE-EEEEECCCeEEEEECCCC-ceEEEE--------------cCCCCCeEEEEEec
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDY-LCSGSLDSFIKLWDLRRK-GCIYTY--------------RGHSKSINSIRFSP 152 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~t~-~~l~~~--------------~~h~~~V~sLafSP 152 (845)
+|..-+++.+|.+.|.++.|+|...+ |++|+.||.|++||++.. .+...+ ..|.+.+..++|+.
T Consensus 177 SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tS 256 (397)
T KOG4283|consen 177 SGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTS 256 (397)
T ss_pred CCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecc
Confidence 99999999999999999999998775 588999999999999754 333333 24678899999999
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
|+.++++++.|..+++ |+..+|..... +-|..+ |...
T Consensus 257 d~~~l~~~gtd~r~r~-------------wn~~~G~ntl~------------~~g~~~-----~n~~------------- 293 (397)
T KOG4283|consen 257 DARYLASCGTDDRIRV-------------WNMESGRNTLR------------EFGPII-----HNQT------------- 293 (397)
T ss_pred cchhhhhccCccceEE-------------eecccCccccc------------cccccc-----cccc-------------
Confidence 9999999999999999 99988875110 000000 0000
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
..+.+.- . +-+.. .++---.++.+.++++-.+
T Consensus 294 ----------------------~~~~~~~--------------------~-~~~s~-----vfv~~p~~~~lall~~~sg 325 (397)
T KOG4283|consen 294 ----------------------TSFAVHI--------------------Q-SMDSD-----VFVLFPNDGSLALLNLLEG 325 (397)
T ss_pred ----------------------ccceEEE--------------------e-ecccc-----eEEEEecCCeEEEEEccCc
Confidence 1111110 0 01111 3444445688999999999
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
..+..+..|-..|.|.++-|+=+...+|+.|+ |..|-.
T Consensus 326 s~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 326 SFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred eEEEeeecccceeeEEeecCchhhhhccccCCccccccc
Confidence 99999999988999999999988999999999 998876
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.7e-17 Score=175.87 Aligned_cols=251 Identities=15% Similarity=0.277 Sum_probs=196.8
Q ss_pred eEEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEE--EecCCC-CCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIM--SLSGHS-TPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~--~l~~h~-~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
++.+.--..+|.+.+|.| +|. .+++++....++.||+.+.+..+ .+.++. ..+.....++++++|+..+..|.|.
T Consensus 250 lqS~~l~~fPi~~a~f~p-~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~ 328 (514)
T KOG2055|consen 250 LQSIHLEKFPIQKAEFAP-NGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIH 328 (514)
T ss_pred heeeeeccCccceeeecC-CCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEE
Confidence 455555677999999999 777 99999999999999998876543 334443 4577788899999999999999999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCe--EEEEEecCCCEEEEEe
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI--NSIRFSPDGQWIASGG 161 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V--~sLafSPdg~~Lasgs 161 (845)
+....+++.+.+++ -.+.|..++|+.|++.|++++.+|.|.+||++...+++.+.. .+.| ++++.++++.|||+|+
T Consensus 329 lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D-~G~v~gts~~~S~ng~ylA~GS 406 (514)
T KOG2055|consen 329 LLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVD-DGSVHGTSLCISLNGSYLATGS 406 (514)
T ss_pred eehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEee-cCccceeeeeecCCCceEEecc
Confidence 99999999999988 678899999999999999999999999999999999999874 3334 5677788999999999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
..|.|.| ||..+...-.. ..+ +
T Consensus 407 ~~GiVNI-------------Yd~~s~~~s~~------------------------PkP-------i-------------- 428 (514)
T KOG2055|consen 407 DSGIVNI-------------YDGNSCFASTN------------------------PKP-------I-------------- 428 (514)
T ss_pred CcceEEE-------------eccchhhccCC------------------------CCc-------h--------------
Confidence 9999999 98654322000 001 1
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe--CCCeEEEEECCCCeEEEEec
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS--ADRTVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs--~DG~I~IWDl~s~~~l~tl~ 319 (845)
.........|++++|++|++ +||.++ .+..+++-.+.+......+.
T Consensus 429 ---------------------------k~~dNLtt~Itsl~Fn~d~q-----iLAiaS~~~knalrLVHvPS~TVFsNfP 476 (514)
T KOG2055|consen 429 ---------------------------KTVDNLTTAITSLQFNHDAQ-----ILAIASRVKKNALRLVHVPSCTVFSNFP 476 (514)
T ss_pred ---------------------------hhhhhhheeeeeeeeCcchh-----hhhhhhhccccceEEEeccceeeeccCC
Confidence 01112234556666677766 666555 56789999988877766665
Q ss_pred CC---CCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 320 KN---SSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 320 gh---~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
.. -+.|+|++|||.|-+||.|..+| +.+|.+.
T Consensus 477 ~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 477 TSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred CCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 43 34699999999999999999999 9999874
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.2e-17 Score=171.83 Aligned_cols=235 Identities=20% Similarity=0.280 Sum_probs=176.6
Q ss_pred CCCCCeEEEEEcCCC--CEEEEEECCCcEEEEECCC----------------CcEEEEEcCCCCCeEEEEEccCC-CEEE
Q psy467 56 GHSTPVESVQFGNGE--ETLSAGCQSGSIKIWNLAV----------------PTVQRTLNGHKSSITSVDFHPYG-DYLC 116 (845)
Q Consensus 56 ~h~~~V~sLafSpdg--~~LaSgs~DGtV~VWDl~t----------------g~~v~~l~~h~~~V~~lafspdg-~~La 116 (845)
.|.+.++-+.-++-+ .+.++-+..|.|.||++.. .+++.++.+|...-..++|||-. ..|+
T Consensus 149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~Ll 228 (440)
T KOG0302|consen 149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLL 228 (440)
T ss_pred ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccc
Confidence 477778888777754 4566667789999999842 35677888999999999999933 3588
Q ss_pred EEECCCeEEEEECCCCceE---EEEcCCCCCeEEEEEecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC
Q psy467 117 SGSLDSFIKLWDLRRKGCI---YTYRGHSKSINSIRFSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT 192 (845)
Q Consensus 117 sgs~DG~I~IWDl~t~~~l---~~~~~h~~~V~sLafSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~ 192 (845)
+|..-+.|++|...++.-. ..+.+|...|-.++|||. ...|++|+.||+|+| ||++.+..-.
T Consensus 229 sGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrI-------------WDiRs~~~~~- 294 (440)
T KOG0302|consen 229 SGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRI-------------WDIRSGPKKA- 294 (440)
T ss_pred cCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEE-------------EEecCCCccc-
Confidence 8888899999999887543 345679999999999995 567999999999999 9999875410
Q ss_pred CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccc
Q psy467 193 PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCV 272 (845)
Q Consensus 193 ~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~ 272 (845)
....+.|... | ..+.|+.+..
T Consensus 295 -----------------~~~~kAh~sD-------V---------------------------NVISWnr~~~-------- 315 (440)
T KOG0302|consen 295 -----------------AVSTKAHNSD-------V---------------------------NVISWNRREP-------- 315 (440)
T ss_pred -----------------eeEeeccCCc-------e---------------------------eeEEccCCcc--------
Confidence 1222445444 4 5566665555
Q ss_pred ccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC---CeEEEEecCCCCCEEEEEEeCC-CCEEEEEeCCC-EEE
Q psy467 273 PVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK---FSLVSTTEKNSSTIRRLTFSEG-GECLLGGDTEG-LKV 347 (845)
Q Consensus 273 ~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s---~~~l~tl~gh~~~VtslafSpd-G~~Lasgs~DG-I~I 347 (845)
+||+|+.||+++|||+++ ++++.++.-|..+|+++.|+|. ...|++++.|. |.|
T Consensus 316 ---------------------lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~Qiti 374 (440)
T KOG0302|consen 316 ---------------------LLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITI 374 (440)
T ss_pred ---------------------eeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEE
Confidence 999999999999999976 5688999999999999999994 55677777777 999
Q ss_pred EEecCCce-----------E-----EEecCCC--CCeEEEEEc---CCceEEEE---EEEE
Q psy467 348 YGWEPARQ-----------Y-----DAQPMGW--GKVQDLAVT---GTQLWFRR---VGTW 384 (845)
Q Consensus 348 WDl~tgk~-----------l-----~tl~~h~--~~VtsVafS---dg~lLaaS---VsiW 384 (845)
||+....- + +-+-.|. ..|-.|.|+ +|-++.++ +.+|
T Consensus 375 WDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVf 435 (440)
T KOG0302|consen 375 WDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVF 435 (440)
T ss_pred EEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccceeEE
Confidence 99864211 1 1122343 458889999 66666666 5555
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.6e-17 Score=171.14 Aligned_cols=256 Identities=20% Similarity=0.336 Sum_probs=186.5
Q ss_pred cCCCcEEEEEEecC---CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCC-CEEEEEECCCcEEEEECC
Q psy467 13 AHGASVNCLALGKK---SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE-ETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 13 gH~~~V~~LafSp~---dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg-~~LaSgs~DGtV~VWDl~ 88 (845)
.|...-..++|+-+ ..-++|.||.-|.|+|.|+.++++...+.+|...|+.+.|.|+. ++|++++.|..|++|+++
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~ 166 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ 166 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence 47778888888763 23488999999999999999999999999999999999999964 789999999999999999
Q ss_pred CCcEEEEEc---CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEE----------------------------E
Q psy467 89 VPTVQRTLN---GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIY----------------------------T 137 (845)
Q Consensus 89 tg~~v~~l~---~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~----------------------------~ 137 (845)
++.++..|. +|.+.|.++.|+.+|.+|++++.|.+|++|++...+... +
T Consensus 167 ~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst 246 (385)
T KOG1034|consen 167 TDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFST 246 (385)
T ss_pred CCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccc
Confidence 999998884 699999999999999999999999999999997332110 1
Q ss_pred EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecC
Q psy467 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 138 ~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h 216 (845)
-.-|...|.|+.|- |+++++-+-++.|.. |.... ++.+....+. ......+..+.-.
T Consensus 247 ~diHrnyVDCvrw~--gd~ilSkscenaI~~-------------w~pgkl~e~~~~vkp~-------es~~Ti~~~~~~~ 304 (385)
T KOG1034|consen 247 TDIHRNYVDCVRWF--GDFILSKSCENAIVC-------------WKPGKLEESIHNVKPP-------ESATTILGEFDYP 304 (385)
T ss_pred cccccchHHHHHHH--hhheeecccCceEEE-------------EecchhhhhhhccCCC-------ccceeeeeEeccC
Confidence 12356667777776 678888888888888 76521 1110000000 0000011222211
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
... +|. ...+|.+.++ .||
T Consensus 305 ~c~-------iWf-------------------------irf~~d~~~~-----------------------------~la 323 (385)
T KOG1034|consen 305 MCD-------IWF-------------------------IRFAFDPWQK-----------------------------MLA 323 (385)
T ss_pred ccc-------eEE-------------------------EEEeecHHHH-----------------------------HHh
Confidence 111 211 1233444444 899
Q ss_pred EEeCCCeEEEEECCCCeEE--EEecC--CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 297 SSSADRTVNFWDLEKFSLV--STTEK--NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 297 tgs~DG~I~IWDl~s~~~l--~tl~g--h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
.|...|.|.+||++...+. .++.. ....|...+||.||.+|+...+|+ |.-||.-
T Consensus 324 ~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 324 LGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred hccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 9999999999999877652 12221 245799999999999999999999 8777753
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-17 Score=183.92 Aligned_cols=268 Identities=20% Similarity=0.305 Sum_probs=197.3
Q ss_pred eeeE-EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC--------CeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 6 EKAE-DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK--------SNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 6 w~l~-~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t--------~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
|.++ ++..|.+.|++++|++ ....|++++.||+|.+|+++. -+.+.++.+|.++|.|++..+++..+++|
T Consensus 284 w~ik~tl~s~~d~ir~l~~~~-sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysg 362 (577)
T KOG0642|consen 284 WNIKFTLRSHDDCIRALAFHP-SEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSG 362 (577)
T ss_pred cceeeeeecchhhhhhhhcCC-CCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEee
Confidence 5543 7889999999999999 888999999999999999932 25688999999999999999999999999
Q ss_pred ECCCcEEEEECCCC----------cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC--CCCC
Q psy467 77 CQSGSIKIWNLAVP----------TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG--HSKS 144 (845)
Q Consensus 77 s~DGtV~VWDl~tg----------~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~--h~~~ 144 (845)
+.||+|+.|++... .....+.+|.+.|+.+++|+....|++++.||++++|+.....+ .++.. ..+.
T Consensus 363 g~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~ 441 (577)
T KOG0642|consen 363 GIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGY 441 (577)
T ss_pred ccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCC
Confidence 99999999966421 23356789999999999999999999999999999999876555 33332 2233
Q ss_pred eEEEEEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccc
Q psy467 145 INSIRFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKA 223 (845)
Q Consensus 145 V~sLafSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~ 223 (845)
..++++-... ...++...-+...+ +++..... +..+.....++
T Consensus 442 Plsvd~~ss~~a~~~~s~~~~~~~~-------------~~~ev~s~--------------------~~~~~s~~~~~--- 485 (577)
T KOG0642|consen 442 PLSVDRTSSRPAHSLASFRFGYTSI-------------DDMEVVSD--------------------LLIFESSASPG--- 485 (577)
T ss_pred cceEeeccchhHhhhhhcccccccc-------------hhhhhhhh--------------------eeeccccCCCc---
Confidence 4455554322 12222222222222 33333322 22222111110
Q ss_pred eeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCe
Q psy467 224 KIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT 303 (845)
Q Consensus 224 ~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~ 303 (845)
......+..+.++|.+. +.+++..|+.
T Consensus 486 ------------------------------------------------~~~~~~in~vVs~~~~~-----~~~~~hed~~ 512 (577)
T KOG0642|consen 486 ------------------------------------------------PRRYPQINKVVSHPTAD-----ITFTAHEDRS 512 (577)
T ss_pred ------------------------------------------------ccccCccceEEecCCCC-----eeEecccCCc
Confidence 00012233444445544 8999999999
Q ss_pred EEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCC
Q psy467 304 VNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWG 364 (845)
Q Consensus 304 I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~ 364 (845)
|+++|..++++++....|...++++++.|+|-+|++++.|+ +++|.++...++.....|..
T Consensus 513 Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r~ 574 (577)
T KOG0642|consen 513 IRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHRK 574 (577)
T ss_pred eecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchheeeccccccc
Confidence 99999999999999999999999999999999999999999 99999988877776666643
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2e-17 Score=180.09 Aligned_cols=248 Identities=21% Similarity=0.334 Sum_probs=187.5
Q ss_pred ceeeeeEE---------ecc--CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEecCCCCCeEEEEEcCC
Q psy467 3 AKVEKAED---------FMA--HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSLSGHSTPVESVQFGNG 69 (845)
Q Consensus 3 irlw~l~~---------L~g--H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~~h~~~V~sLafSpd 69 (845)
+|+|++.. |.. -..-|.++.++| +|+-|++|++-.++.|||+..... ...+....-.+++++.+||
T Consensus 442 VKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~p-dgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spD 520 (705)
T KOG0639|consen 442 VKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLP-DGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 520 (705)
T ss_pred EEEeeccCCCCCCccccccccCcccceeeeEecC-CCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCc
Confidence 57888642 222 345788999999 999999999999999999975543 3344444567888999999
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEE
Q psy467 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149 (845)
Q Consensus 70 g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLa 149 (845)
.+..++++.||.|.|||+.+...++.|++|...+.||..++||..|.+|+-|.+|+.||++++..+.... ....|.++.
T Consensus 521 akvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg 599 (705)
T KOG0639|consen 521 AKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLG 599 (705)
T ss_pred cceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh-hhhhheecc
Confidence 9999999999999999999999999999999999999999999999999999999999999988776654 567899999
Q ss_pred EecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC-CCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEe
Q psy467 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL-GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVT 228 (845)
Q Consensus 150 fSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l-~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~ 228 (845)
++|.+.|+++|-+++.+.+ ......+.. -..+...+.++.|.+.|+..... +... .+++|
T Consensus 600 ~cP~~dWlavGMens~vev-------------lh~skp~kyqlhlheScVLSlKFa~cGkwfvSt-GkDn-----lLnaw 660 (705)
T KOG0639|consen 600 YCPTGDWLAVGMENSNVEV-------------LHTSKPEKYQLHLHESCVLSLKFAYCGKWFVST-GKDN-----LLNAW 660 (705)
T ss_pred cCCCccceeeecccCcEEE-------------EecCCccceeecccccEEEEEEecccCceeeec-Cchh-----hhhhc
Confidence 9999999999999999888 554433321 12235566677777777765442 1111 11121
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEE
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWD 308 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWD 308 (845)
+. +....+.-++ ...+|.++.+|.|.+ +++||+.|....+|.
T Consensus 661 rt---------------------PyGasiFqsk------------E~SsVlsCDIS~ddk-----yIVTGSGdkkATVYe 702 (705)
T KOG0639|consen 661 RT---------------------PYGASIFQSK------------ESSSVLSCDISFDDK-----YIVTGSGDKKATVYE 702 (705)
T ss_pred cC---------------------ccccceeecc------------ccCcceeeeeccCce-----EEEecCCCcceEEEE
Confidence 11 1101111111 135678888888888 999999998888886
Q ss_pred C
Q psy467 309 L 309 (845)
Q Consensus 309 l 309 (845)
+
T Consensus 703 V 703 (705)
T KOG0639|consen 703 V 703 (705)
T ss_pred E
Confidence 4
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-16 Score=164.63 Aligned_cols=265 Identities=19% Similarity=0.280 Sum_probs=199.7
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEECCCC--------ee----EEEec-CCCCCeEEEEEc-------CCCCEEEEEE
Q psy467 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKS--------NC----IMSLS-GHSTPVESVQFG-------NGEETLSAGC 77 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--------~~----i~~l~-~h~~~V~sLafS-------pdg~~LaSgs 77 (845)
...+.|+| +|..|++-+.|..+++|++... .. ...+. .....|...+|- |+.+++++.+
T Consensus 52 ~kgckWSP-DGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ss 130 (406)
T KOG2919|consen 52 LKGCKWSP-DGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSS 130 (406)
T ss_pred hccceeCC-CCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecc
Confidence 45678999 9999999999999999998421 00 01111 134567777885 6778999999
Q ss_pred CCCcEEEEECCCCcEEEEEcC--CC---CCeEEEEEccCCCEEEEEECCCeEEEEEC-CCCceEEE--E-----cCCCCC
Q psy467 78 QSGSIKIWNLAVPTVQRTLNG--HK---SSITSVDFHPYGDYLCSGSLDSFIKLWDL-RRKGCIYT--Y-----RGHSKS 144 (845)
Q Consensus 78 ~DGtV~VWDl~tg~~v~~l~~--h~---~~V~~lafspdg~~Lasgs~DG~I~IWDl-~t~~~l~~--~-----~~h~~~ 144 (845)
.+.-|.+||.-+|+....+.+ |. ....+++|+|||.+|++|. ...|+++|+ +.|..... . .+..+-
T Consensus 131 r~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~gi 209 (406)
T KOG2919|consen 131 RDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGI 209 (406)
T ss_pred ccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccccce
Confidence 999999999999998877754 22 2456899999999998775 578999999 55542211 1 123567
Q ss_pred eEEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccc
Q psy467 145 INSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKA 223 (845)
Q Consensus 145 V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~ 223 (845)
+.|++|+| +.+.++.++....+-| |.-..+.+ +..+-+|.++
T Consensus 210 isc~a~sP~~~~~~a~gsY~q~~gi-------------y~~~~~~p--------------------l~llggh~gG---- 252 (406)
T KOG2919|consen 210 ISCFAFSPMDSKTLAVGSYGQRVGI-------------YNDDGRRP--------------------LQLLGGHGGG---- 252 (406)
T ss_pred eeeeeccCCCCcceeeecccceeee-------------EecCCCCc--------------------eeeecccCCC----
Confidence 88999999 5568999999888888 77666666 6777777777
Q ss_pred eeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCC
Q psy467 224 KIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADR 302 (845)
Q Consensus 224 ~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG 302 (845)
| +.+.|.++|. .|.+|+ .|-
T Consensus 253 ---v---------------------------ThL~~~edGn-----------------------------~lfsGaRk~d 273 (406)
T KOG2919|consen 253 ---V---------------------------THLQWCEDGN-----------------------------KLFSGARKDD 273 (406)
T ss_pred ---e---------------------------eeEEeccCcC-----------------------------eecccccCCC
Confidence 6 6677777766 677766 477
Q ss_pred eEEEEECCC-CeEEEEecCCCC-CEEEEEE--eCCCCEEEEEeCCC-EEEEEecC-CceEEEecCCCCCeEEEEEcCC-c
Q psy467 303 TVNFWDLEK-FSLVSTTEKNSS-TIRRLTF--SEGGECLLGGDTEG-LKVYGWEP-ARQYDAQPMGWGKVQDLAVTGT-Q 375 (845)
Q Consensus 303 ~I~IWDl~s-~~~l~tl~gh~~-~Vtslaf--SpdG~~Lasgs~DG-I~IWDl~t-gk~l~tl~~h~~~VtsVafSdg-~ 375 (845)
.|..||++. +.++..+..|.+ .-..|.| .|+|++|++|+.+| |++||++. +..+..+..+...++.+++++- .
T Consensus 274 kIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mp 353 (406)
T KOG2919|consen 274 KILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMP 353 (406)
T ss_pred eEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccc
Confidence 899999986 456777777755 3344444 67899999999999 99999998 7778888889999999999944 4
Q ss_pred eEEEE
Q psy467 376 LWFRR 380 (845)
Q Consensus 376 lLaaS 380 (845)
+++++
T Consensus 354 ilats 358 (406)
T KOG2919|consen 354 ILATS 358 (406)
T ss_pred eeeec
Confidence 44444
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-14 Score=156.20 Aligned_cols=281 Identities=32% Similarity=0.559 Sum_probs=215.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeC-CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCC-EEEEEECCCcEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGD-DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE-TLSAGCQSGSIKIW 85 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~-~LaSgs~DGtV~VW 85 (845)
...+..|...|.+++|+| ++.++++++. |+.+++|+...+..+..+.+|...|.+++|+|++. .+++++.|+.|.+|
T Consensus 148 ~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~w 226 (466)
T COG2319 148 IRTLEGHSESVTSLAFSP-DGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLW 226 (466)
T ss_pred EEEEecCcccEEEEEECC-CCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEE
Confidence 356889999999999999 8888888885 99999999998889999999999999999999998 55555899999999
Q ss_pred ECCCCcEEE-EEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-EEEEcCCCCCeEEEEEecCCCEEEEEeCC
Q psy467 86 NLAVPTVQR-TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC-IYTYRGHSKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 86 Dl~tg~~v~-~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~-l~~~~~h~~~V~sLafSPdg~~Lasgs~D 163 (845)
|...+.... .+..|...+ ...|++++.++++++.|+.+++|++..... +..+..|...+.++.|+|++..+++++.|
T Consensus 227 d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d 305 (466)
T COG2319 227 DLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSD 305 (466)
T ss_pred ECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCC
Confidence 999888877 688888775 448999998999999999999999986664 44446688899999999988888889989
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe--cCCCCCccceeeEeeeccccccccccc
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT--KGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~--~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
+.+.+ ||..+... ..... .|... +
T Consensus 306 ~~~~~-------------~~~~~~~~--------------------~~~~~~~~~~~~-------~-------------- 331 (466)
T COG2319 306 GTVRL-------------WDLETGKL--------------------LSSLTLKGHEGP-------V-------------- 331 (466)
T ss_pred CcEEE-------------EEcCCCce--------------------EEEeeecccCCc-------e--------------
Confidence 88899 98876665 22221 22221 2
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE-eCCCeEEEEECCCCeEEEEecC
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS-SADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg-s~DG~I~IWDl~s~~~l~tl~g 320 (845)
..+.+.+++. .++.+ ..|+.+.+|+............
T Consensus 332 -------------~~~~~~~~~~-----------------------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 369 (466)
T COG2319 332 -------------SSLSFSPDGS-----------------------------LLVSGGSDDGTIRLWDLRTGKPLKTLEG 369 (466)
T ss_pred -------------EEEEECCCCC-----------------------------EEEEeecCCCcEEeeecCCCceeEEecC
Confidence 3344422212 34444 6789999999988773333333
Q ss_pred CCCCEEEEEEeCCCCEEEE-EeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 321 NSSTIRRLTFSEGGECLLG-GDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 321 h~~~VtslafSpdG~~Las-gs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
+ ..+..+.+++ ...++. +..++ +.+|+............+...+....++ ++..++.+ +..|....
T Consensus 370 ~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 370 H-SNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred C-ceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence 2 2288999998 544444 56777 9999999988776666554788888888 77777653 77786554
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-16 Score=183.09 Aligned_cols=328 Identities=17% Similarity=0.214 Sum_probs=219.8
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC----CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK----SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t----~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
.|.-.++|.++|| +++++|+|..||.|.+|.--. ....+.+..|...|.+++|+++|.+|.+|+..|.+.+|.++
T Consensus 203 ~Htf~~t~~~~sp-n~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~ 281 (792)
T KOG1963|consen 203 HHTFNITCVALSP-NERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLE 281 (792)
T ss_pred hhcccceeEEecc-ccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeec
Confidence 4677799999999 999999999999999997422 23456778899999999999999999999999999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-----------CCCCeEEEEEecCCCEE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-----------HSKSINSIRFSPDGQWI 157 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-----------h~~~V~sLafSPdg~~L 157 (845)
+++ .+-+..-.++|..+.++||+.+.+....|..|.+....+.....++.+ ..+-.+.++++|..+.+
T Consensus 282 T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~ 360 (792)
T KOG1963|consen 282 TGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSL 360 (792)
T ss_pred CCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCce
Confidence 998 555666788999999999999999999999999998866554444432 13345678899977788
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC-------------CCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-------------PQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-------------~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
+..+..|.|.+ ||+-+...+..+. ...+..++.+-.|..+++...........
T Consensus 361 vln~~~g~vQ~-------------ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~- 426 (792)
T KOG1963|consen 361 VLNGHPGHVQF-------------YDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFF- 426 (792)
T ss_pred eecCCCceEEE-------------EeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhcc-
Confidence 88889999999 7776655532221 11233344444455555443221110000
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeE---EEcCCCC--cCCCCcccccccCceeEEEcCCCCcccceEEEEEe
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSA---IFQPHRS--LNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS 299 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l---~fspdg~--~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs 299 (845)
.....+ .+.++.+ .+.+.-..+|...+...++.+..+.. .+++++
T Consensus 427 ---------------------------~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~---~~vta~ 476 (792)
T KOG1963|consen 427 ---------------------------DGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSV---RCVTAS 476 (792)
T ss_pred ---------------------------CceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccc---eeEEec
Confidence 000111 1222221 11122223444444444443332211 688999
Q ss_pred CCCeEEEEECCC----------CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecC-CceEEEecCCCCCeEE
Q psy467 300 ADRTVNFWDLEK----------FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEP-ARQYDAQPMGWGKVQD 368 (845)
Q Consensus 300 ~DG~I~IWDl~s----------~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~t-gk~l~tl~~h~~~Vts 368 (845)
.||.++||-+.. +.|...-.-|..++++++|+.||..|+++.+|.|.+||..+ .............+..
T Consensus 477 ~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s~~~~Itiwd~~~~~~l~~~~~~~~~~~~~ 556 (792)
T KOG1963|consen 477 VDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVSFDDTITIWDYDTKNELLCTEGSRNWPIAE 556 (792)
T ss_pred cCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEecCCEEEEecCCChhhhhccccccccchHh
Confidence 999999998732 23333222378899999999999988888877799999998 4444433333333333
Q ss_pred EEEc-----CCceEEEE---EEEEee
Q psy467 369 LAVT-----GTQLWFRR---VGTWSH 386 (845)
Q Consensus 369 VafS-----dg~lLaaS---VsiW~~ 386 (845)
+.+. ++.++.++ +.+|.+
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~l~~WNl 582 (792)
T KOG1963|consen 557 LLFTAQTQNDGALVHATQQRLSVWNL 582 (792)
T ss_pred HhhhcccccccceeeccCceEehHhh
Confidence 3332 55555555 777754
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.7e-16 Score=164.67 Aligned_cols=308 Identities=19% Similarity=0.292 Sum_probs=215.1
Q ss_pred EEeccCCCcEEEEEEec----CCCCEEEEEeCCCeEEEEECCCCe---eEEEec--CCCCCeEEEEEcCC----CCEEEE
Q psy467 9 EDFMAHGASVNCLALGK----KSGQVLATGGDDKKVNLWALGKSN---CIMSLS--GHSTPVESVQFGNG----EETLSA 75 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp----~dg~~LaTgs~DG~I~IWdl~t~~---~i~~l~--~h~~~V~sLafSpd----g~~LaS 75 (845)
+-.+.|..+|..++|++ +..+.+|++|.+ .+.+|...... .++.+. .|...-..++|+-+ ..++|+
T Consensus 32 ~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~ 110 (385)
T KOG1034|consen 32 HLKEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAA 110 (385)
T ss_pred ehhccCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEe
Confidence 44668899999999984 244677887765 78899875433 233332 36777888889764 347888
Q ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEc---CCCCCeEEEEEe
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSINSIRFS 151 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~---~h~~~V~sLafS 151 (845)
|+.-|.|+|.|+.+++....+.+|...|+.+.++|+. +++++++.|..|++|++++..++..+- +|...|.++.|+
T Consensus 111 ~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~ 190 (385)
T KOG1034|consen 111 GGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFS 190 (385)
T ss_pred ecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEc
Confidence 9999999999999999999999999999999999976 688999999999999999999988874 699999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 152 PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 152 Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++|.+|++++.|.++++ |++...+....+ -.++.|++++.... +.....
T Consensus 191 ~~gd~i~ScGmDhslk~-------------W~l~~~~f~~~l----E~s~~~~~~~t~~p-fpt~~~------------- 239 (385)
T KOG1034|consen 191 LDGDRIASCGMDHSLKL-------------WRLNVKEFKNKL----ELSITYSPNKTTRP-FPTPKT------------- 239 (385)
T ss_pred CCCCeeeccCCcceEEE-------------EecChhHHhhhh----hhhcccCCCCccCc-CCcccc-------------
Confidence 99999999999999999 999854431111 11233333332111 000000
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC-
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE- 310 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~- 310 (845)
.-..|+. ...|...|-|+.|--| ++++-+.++.|..|..-
T Consensus 240 -----------------------~fp~fst---------~diHrnyVDCvrw~gd-------~ilSkscenaI~~w~pgk 280 (385)
T KOG1034|consen 240 -----------------------HFPDFST---------TDIHRNYVDCVRWFGD-------FILSKSCENAIVCWKPGK 280 (385)
T ss_pred -----------------------ccccccc---------cccccchHHHHHHHhh-------heeecccCceEEEEecch
Confidence 0001110 0112233444545443 78888889999999762
Q ss_pred CC-------------eEEEEecCCCCCEEEEE--EeCCCCEEEEEeCCC-EEEEEecCCceE--EEecC--CCCCeEEEE
Q psy467 311 KF-------------SLVSTTEKNSSTIRRLT--FSEGGECLLGGDTEG-LKVYGWEPARQY--DAQPM--GWGKVQDLA 370 (845)
Q Consensus 311 s~-------------~~l~tl~gh~~~Vtsla--fSpdG~~Lasgs~DG-I~IWDl~tgk~l--~tl~~--h~~~VtsVa 370 (845)
-. ..+.++.-....|.-+. |.+-+++||.|...| |.+||++..... .++.. ....|+..+
T Consensus 281 l~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~s 360 (385)
T KOG1034|consen 281 LEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTS 360 (385)
T ss_pred hhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeee
Confidence 11 12333333344555554 456689999999999 999999986552 22222 235799999
Q ss_pred Ec-CCceEEEE---EEEEeeC
Q psy467 371 VT-GTQLWFRR---VGTWSHQ 387 (845)
Q Consensus 371 fS-dg~lLaaS---VsiW~~d 387 (845)
|| ||.+|++- ..+|..|
T Consensus 361 fS~dgs~lv~vcdd~~Vwrwd 381 (385)
T KOG1034|consen 361 FSRDGSILVLVCDDGTVWRWD 381 (385)
T ss_pred ecccCcEEEEEeCCCcEEEEE
Confidence 99 99888776 6666554
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=197.50 Aligned_cols=247 Identities=21% Similarity=0.347 Sum_probs=195.4
Q ss_pred CcEEEEEEecCCCC----EEEEEeCCCeEEEEECCCC------eeEEEecCCCCCeEEEEEcCCCC-EEEEEECCCcEEE
Q psy467 16 ASVNCLALGKKSGQ----VLATGGDDKKVNLWALGKS------NCIMSLSGHSTPVESVQFGNGEE-TLSAGCQSGSIKI 84 (845)
Q Consensus 16 ~~V~~LafSp~dg~----~LaTgs~DG~I~IWdl~t~------~~i~~l~~h~~~V~sLafSpdg~-~LaSgs~DGtV~V 84 (845)
..-+.++|++ .|. +||.|.+||.|.+||...- ..+.+...|++.|..+.|++... +||+|+.+|.|.|
T Consensus 65 ~rF~kL~W~~-~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~i 143 (1049)
T KOG0307|consen 65 NRFNKLAWGS-YGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILI 143 (1049)
T ss_pred ccceeeeecc-cCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEE
Confidence 4678899988 555 4999999999999997542 34566778999999999999654 9999999999999
Q ss_pred EECCCCcEEEEEc--CCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEEcCCCC--CeEEEEEecCCC-EEE
Q psy467 85 WNLAVPTVQRTLN--GHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK--SINSIRFSPDGQ-WIA 158 (845)
Q Consensus 85 WDl~tg~~v~~l~--~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~--~V~sLafSPdg~-~La 158 (845)
||+.+.+.-.... .....|.+++|+.. ...|++++.+|.+.|||++..+.+..+..+.+ .+..++|+|+.. .++
T Consensus 144 WDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~ 223 (1049)
T KOG0307|consen 144 WDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLL 223 (1049)
T ss_pred eccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeee
Confidence 9998754433331 24567999999874 45778899999999999998888877766544 477899999764 466
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+++.|...-+ |.+||++.-.. .+..+.+|..+ |
T Consensus 224 ~As~dd~~Pv----------iqlWDlR~ass-------------------P~k~~~~H~~G-------i----------- 256 (1049)
T KOG0307|consen 224 VASGDDSAPV----------IQLWDLRFASS-------------------PLKILEGHQRG-------I----------- 256 (1049)
T ss_pred eecCCCCCce----------eEeecccccCC-------------------chhhhcccccc-------e-----------
Confidence 6666554333 44599986443 14556677777 6
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT 318 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl 318 (845)
.++.|++.+. + +|++++.|+.|.+|+.++++.+..+
T Consensus 257 ----------------lslsWc~~D~-----------------------~-----lllSsgkD~~ii~wN~~tgEvl~~~ 292 (1049)
T KOG0307|consen 257 ----------------LSLSWCPQDP-----------------------R-----LLLSSGKDNRIICWNPNTGEVLGEL 292 (1049)
T ss_pred ----------------eeeccCCCCc-----------------------h-----hhhcccCCCCeeEecCCCceEeeec
Confidence 6777776653 1 8999999999999999999999999
Q ss_pred cCCCCCEEEEEEeCCCC-EEEEEeCCC-EEEEEecCCc
Q psy467 319 EKNSSTIRRLTFSEGGE-CLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 319 ~gh~~~VtslafSpdG~-~Lasgs~DG-I~IWDl~tgk 354 (845)
.....++..+.|+|... .+++++-|| |.||.+....
T Consensus 293 p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 293 PAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred CCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 98889999999999766 788889999 9999988653
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.9e-16 Score=166.61 Aligned_cols=286 Identities=16% Similarity=0.252 Sum_probs=213.5
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC------CCeeEEEec-CCCCCeEEEEEcCCCCEEEEEECCCc
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG------KSNCIMSLS-GHSTPVESVQFGNGEETLSAGCQSGS 81 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~------t~~~i~~l~-~h~~~V~sLafSpdg~~LaSgs~DGt 81 (845)
+.+.+|.+.|+++.||. ++++||+|+.|..+++|+++ +.+++.... .|...|.|++|....+.|++|..+++
T Consensus 50 KD~~~H~GCiNAlqFS~-N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~ 128 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSH-NDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGT 128 (609)
T ss_pred hhhhhhccccceeeecc-CCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcce
Confidence 56789999999999999 89999999999999999984 335555443 46689999999999999999999999
Q ss_pred EEEEECCCCcEEEEEcC--CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc-e--EEEEcCCCCCeEEEEEecC-CC
Q psy467 82 IKIWNLAVPTVQRTLNG--HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG-C--IYTYRGHSKSINSIRFSPD-GQ 155 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~--h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~-~--l~~~~~h~~~V~sLafSPd-g~ 155 (845)
|...|+++.+.+..+.. ..+.|..+..+|..+.|++.+.+|.|.+||.+... . +............+.|+|. ..
T Consensus 129 VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~ 208 (609)
T KOG4227|consen 129 VIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPA 208 (609)
T ss_pred eEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCce
Confidence 99999999888777752 23589999999999999999999999999998654 2 2223334556788999995 56
Q ss_pred EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC-------CCCCC--CCCcceeecCCCCeEEEEecCCCCCccceee
Q psy467 156 WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL-------GTPPP--QYTSSVPFSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 156 ~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l-------~~~~~--~~i~svs~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
+|++.+..+-+.+ ||.+..... ..++. ..-..+.|+|+|..+..+.....+
T Consensus 209 Li~~~~~~~G~~~-------------~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P------- 268 (609)
T KOG4227|consen 209 LILVNSETGGPNV-------------FDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCP------- 268 (609)
T ss_pred eEEeccccCCCCc-------------eeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCC-------
Confidence 7888888888999 998764331 01111 112467788998877766655544
Q ss_pred Ee-eecccccccccccchhhhhhccCCCceeEEEc----CCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 227 VT-RIEENAESEDQAGEEELFATIANPCDYSAIFQ----PHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 227 V~-~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fs----pdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
++ ++. .+ .+..|. |+|. .....+.+++|..|. .+++|+.+
T Consensus 269 ~~~D~~------------------S~---R~~V~k~D~N~~GY--------~N~~T~KS~~F~~D~------~v~tGSD~ 313 (609)
T KOG4227|consen 269 LYFDFI------------------SQ---RCFVLKSDHNPNGY--------CNIKTIKSMTFIDDY------TVATGSDH 313 (609)
T ss_pred EEeeee------------------cc---cceeEeccCCCCcc--------eeeeeeeeeeeecce------eeeccCcc
Confidence 21 000 00 122222 2222 223446678888876 48999999
Q ss_pred CeEEEEECCC-----------------------CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 302 RTVNFWDLEK-----------------------FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 302 G~I~IWDl~s-----------------------~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
-.|++|.+.. .+.+..+.+|...++.+.|+|...+|++.+-.. ++||.-
T Consensus 314 ~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 314 WGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred cceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhheecccc
Confidence 9999998742 123567889999999999999999999888888 999964
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-16 Score=176.92 Aligned_cols=123 Identities=25% Similarity=0.432 Sum_probs=106.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE------EEecCCCCCeEEEEEcCCCCEEEEEECCCc
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI------MSLSGHSTPVESVQFGNGEETLSAGCQSGS 81 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i------~~l~~h~~~V~sLafSpdg~~LaSgs~DGt 81 (845)
+-.+.+|.+.|+.+.|+|-...+||||+.|..|+||.+..+-.. ..+.+.+-.|.|+.|+|...-|...+..|+
T Consensus 72 i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g~ 151 (1012)
T KOG1445|consen 72 IGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHGS 151 (1012)
T ss_pred cceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCce
Confidence 45688999999999999977789999999999999999743211 223344567899999997666666667999
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~ 130 (845)
+.|||+.+++....+.+|...|.++.|+.||..|++++.|.+|+|||.+
T Consensus 152 v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPR 200 (1012)
T KOG1445|consen 152 VYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPR 200 (1012)
T ss_pred EEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCc
Confidence 9999999999999999999999999999999999999999999999986
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-17 Score=195.73 Aligned_cols=274 Identities=20% Similarity=0.314 Sum_probs=202.0
Q ss_pred EEEEEecCCCC-EEEEEe----------CCCeEEEEECCCC------eeEEEecCCCCCeEEEEEcCCCCE----EEEEE
Q psy467 19 NCLALGKKSGQ-VLATGG----------DDKKVNLWALGKS------NCIMSLSGHSTPVESVQFGNGEET----LSAGC 77 (845)
Q Consensus 19 ~~LafSp~dg~-~LaTgs----------~DG~I~IWdl~t~------~~i~~l~~h~~~V~sLafSpdg~~----LaSgs 77 (845)
-.++|+| .+. ++|+|. .+.++-||.+... +.+..+. -...-+.++|.+.+.. ||.|.
T Consensus 10 a~~awSp-~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~ 87 (1049)
T KOG0307|consen 10 ATFAWSP-ASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGL 87 (1049)
T ss_pred ceEEecC-CCchhhHHHhhhhccccccccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeeccc
Confidence 3578999 444 666652 3556677765322 1222232 3456889999987765 88888
Q ss_pred CCCcEEEEECCC---C---cEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEEE
Q psy467 78 QSGSIKIWNLAV---P---TVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINSI 148 (845)
Q Consensus 78 ~DGtV~VWDl~t---g---~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~sL 148 (845)
.||.|.+||... + ..+.+...|.+.|..+.|++... .||+|+.||.|.|||+..-+.-.++. .....|.++
T Consensus 88 edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~l 167 (1049)
T KOG0307|consen 88 EDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCL 167 (1049)
T ss_pred cCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEe
Confidence 999999999875 2 34556678999999999999764 99999999999999998654433331 245689999
Q ss_pred EEecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeE
Q psy467 149 RFSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 149 afSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
+|+.. ...|++++.+|.+.| ||++..+. +..+..+... ..+
T Consensus 168 sWNrkvqhILAS~s~sg~~~i-------------WDlr~~~p--------------------ii~ls~~~~~-----~~~ 209 (1049)
T KOG0307|consen 168 SWNRKVSHILASGSPSGRAVI-------------WDLRKKKP--------------------IIKLSDTPGR-----MHC 209 (1049)
T ss_pred ccchhhhHHhhccCCCCCcee-------------ccccCCCc--------------------ccccccCCCc-----cce
Confidence 99874 456889999999999 99998776 3332222111 112
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC---CeE
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD---RTV 304 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D---G~I 304 (845)
..+.|+|+.. . .+++++.| -.|
T Consensus 210 ---------------------------S~l~WhP~~a------------------------T----ql~~As~dd~~Pvi 234 (1049)
T KOG0307|consen 210 ---------------------------SVLAWHPDHA------------------------T----QLLVASGDDSAPVI 234 (1049)
T ss_pred ---------------------------eeeeeCCCCc------------------------e----eeeeecCCCCCcee
Confidence 4566666654 1 45555444 369
Q ss_pred EEEECCCC-eEEEEecCCCCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc--CCceEEE
Q psy467 305 NFWDLEKF-SLVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT--GTQLWFR 379 (845)
Q Consensus 305 ~IWDl~s~-~~l~tl~gh~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS--dg~lLaa 379 (845)
.+||++.- .+++++.+|...|.++.|++.+ ++|++++.|+ |.+|+.++++.+..+....+++.++.|+ +-.++++
T Consensus 235 qlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~ 314 (1049)
T KOG0307|consen 235 QLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAA 314 (1049)
T ss_pred EeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhh
Confidence 99998754 5788889999999999999965 8999999999 9999999999999999989999999999 4445555
Q ss_pred E-----EEEEeeC
Q psy467 380 R-----VGTWSHQ 387 (845)
Q Consensus 380 S-----VsiW~~d 387 (845)
+ |+|+.+.
T Consensus 315 asfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 315 ASFDGKISIYSLQ 327 (1049)
T ss_pred heeccceeeeeee
Confidence 4 7777654
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=173.76 Aligned_cols=219 Identities=20% Similarity=0.329 Sum_probs=177.2
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc
Q psy467 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~ 97 (845)
-.|++... ...|+++||..+.|+|||+....+.+.+.+|...|+++.++....|||+++..|.|.|..+.++.....|.
T Consensus 82 ~~Cv~~~s-~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~ 160 (673)
T KOG4378|consen 82 AFCVACAS-QSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFT 160 (673)
T ss_pred HHHHhhhh-cceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcccccee
Confidence 34444444 44799999999999999999877888899999999999999999999999999999999999988777776
Q ss_pred CC-CCCeEEEEEccCCCE-EEEEECCCeEEEEECCCCceEEEE-cCCCCCeEEEEEec-CCCEEEEEeCCCcEEEeeeec
Q psy467 98 GH-KSSITSVDFHPYGDY-LCSGSLDSFIKLWDLRRKGCIYTY-RGHSKSINSIRFSP-DGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 98 ~h-~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~t~~~l~~~-~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~ 173 (845)
.. ...|..+.|++..+. |.+++.+|.|.+||+....++..+ +.|..+...++|+| +..+|++.+.|..|.+
T Consensus 161 ~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~----- 235 (673)
T KOG4378|consen 161 IDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINI----- 235 (673)
T ss_pred cCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEE-----
Confidence 44 345668999998764 567899999999999877777655 56999999999999 4567889999999999
Q ss_pred cCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~ 253 (845)
||.+.... ...+..... .
T Consensus 236 --------yD~~s~~s--------------------~~~l~y~~P--------l-------------------------- 253 (673)
T KOG4378|consen 236 --------YDIRSQAS--------------------TDRLTYSHP--------L-------------------------- 253 (673)
T ss_pred --------eecccccc--------------------cceeeecCC--------c--------------------------
Confidence 99986555 111111111 1
Q ss_pred ceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCCEEEEEEeC
Q psy467 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSSTIRRLTFSE 332 (845)
Q Consensus 254 ~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~VtslafSp 332 (845)
..++|.++|. +|++|...|.|..||++.. .++.++..|...|++++|-+
T Consensus 254 -stvaf~~~G~-----------------------------~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~ 303 (673)
T KOG4378|consen 254 -STVAFSECGT-----------------------------YLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQP 303 (673)
T ss_pred -ceeeecCCce-----------------------------EEEeecCCceEEEEecccCCCCceEeeecccceeEEEeee
Confidence 4455555555 9999999999999999864 57888999999999999987
Q ss_pred CC
Q psy467 333 GG 334 (845)
Q Consensus 333 dG 334 (845)
.-
T Consensus 304 s~ 305 (673)
T KOG4378|consen 304 SP 305 (673)
T ss_pred cc
Confidence 65
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-18 Score=193.25 Aligned_cols=269 Identities=19% Similarity=0.338 Sum_probs=215.3
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
+..++.|.||..+|.|+.|.. .|.++++|+.|..++||..+++.++....||.+.|+.++.+.+..++++++.|..|++
T Consensus 180 mk~ikrLlgH~naVyca~fDr-tg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrv 258 (1113)
T KOG0644|consen 180 MKNIKRLLGHRNAVYCAIFDR-TGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRV 258 (1113)
T ss_pred HHHHHHHHhhhhheeeeeecc-ccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEE
Confidence 344567899999999999998 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE----c-CCCCCeEEEEEecCCCEEEE
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY----R-GHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~----~-~h~~~V~sLafSPdg~~Las 159 (845)
|.+.++.++..+.+|++.|++++|+|-. +.+.||++++||.+ ...+... + ....-+.++.|...+.-+++
T Consensus 259 Wrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~T 333 (1113)
T KOG0644|consen 259 WRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLT 333 (1113)
T ss_pred EecCCCchHHHHhccccceeeeccCccc----cCCCCCceEecccc-ccccccCCCCCCcccccceeeeecccccccccc
Confidence 9999999999999999999999999954 77889999999987 1111111 1 12345667777777888899
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
++.|+.-.. |.+..... +... +
T Consensus 334 gs~d~ea~n-------------~e~~~l~~--------------------------~~~~-------l------------ 355 (1113)
T KOG0644|consen 334 GSRDGEARN-------------HEFEQLAW--------------------------RSNL-------L------------ 355 (1113)
T ss_pred ccCCccccc-------------chhhHhhh--------------------------hccc-------e------------
Confidence 999888887 65542211 0000 0
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~ 319 (845)
.-+..+.+-. . +.+++-.+-.+.+|++.+|.+++.+.
T Consensus 356 ---------------if~t~ssd~~-----------------------~-----~~~~ar~~~~~~vwnl~~g~l~H~l~ 392 (1113)
T KOG0644|consen 356 ---------------IFVTRSSDLS-----------------------S-----IVVTARNDHRLCVWNLYTGQLLHNLM 392 (1113)
T ss_pred ---------------EEEecccccc-----------------------c-----cceeeeeeeEeeeeecccchhhhhhc
Confidence 0000110100 0 56666678889999999999999999
Q ss_pred CCCCCEEEEEEeCCCCE-EEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 320 KNSSTIRRLTFSEGGEC-LLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 320 gh~~~VtslafSpdG~~-Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
+|...+..+.++|-+.. ..+++.|| ..|||+-.|..++.+.-..+.+.+-+|| ||..++.+
T Consensus 393 ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~ls 456 (1113)
T KOG0644|consen 393 GHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALS 456 (1113)
T ss_pred ccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecC
Confidence 99999999999996554 45889999 9999999988776665446778888999 99999888
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.1e-16 Score=173.44 Aligned_cols=273 Identities=18% Similarity=0.288 Sum_probs=200.5
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
.|..++|-| +|..|+.+..+ .+.+||..+|..+.++++|.+.|+|++|+.||+.+|+|+.|..|.+|+-.-.. +...
T Consensus 14 ci~d~afkP-DGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG-~LkY 90 (1081)
T KOG1538|consen 14 CINDIAFKP-DGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG-ILKY 90 (1081)
T ss_pred chheeEECC-CCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc-eeee
Confidence 899999999 88777776544 79999999999999999999999999999999999999999999999976433 2333
Q ss_pred cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCC
Q psy467 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN 176 (845)
Q Consensus 97 ~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~ 176 (845)
. |...|.|+.|+|-...|++++-. ..-+|....... ...+ ....+.+.+|..||++++.|-.+|+|.+
T Consensus 91 S-H~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V-~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsi-------- 158 (1081)
T KOG1538|consen 91 S-HNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSV-SKHK-SSSRIICCSWTNDGQYLALGMFNGTISI-------- 158 (1081)
T ss_pred c-cCCeeeEeecCchHHHhhhcchh-hccccChhhhhH-Hhhh-hheeEEEeeecCCCcEEEEeccCceEEe--------
Confidence 3 89999999999999999998754 367888765432 2322 3457889999999999999999999999
Q ss_pred ceeEEEECCCCcc---CCCC--CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccC
Q psy467 177 TSIHVVDLSLVHP---LGTP--PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIAN 251 (845)
Q Consensus 177 ~~I~vWDl~tg~~---l~~~--~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~ 251 (845)
-+- +++. +..+ ....+.+++|+|... .+....+.|.+-
T Consensus 159 -----RNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg----------~G~~di~aV~DW--------------------- 201 (1081)
T KOG1538|consen 159 -----RNK-NGEEKVKIERPGGSNSPIWSICWNPSSG----------EGRNDILAVADW--------------------- 201 (1081)
T ss_pred -----ecC-CCCcceEEeCCCCCCCCceEEEecCCCC----------CCccceEEEEec---------------------
Confidence 322 2222 1111 134566777776542 111111111000
Q ss_pred CCceeEEE-cCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEE
Q psy467 252 PCDYSAIF-QPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTF 330 (845)
Q Consensus 252 ~~~~~l~f-spdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtslaf 330 (845)
. ..+.| +-+|+ ..+..........++.+-++|. ++..|+.|+.+++|- +.|-.+.++.....+|+.++.
T Consensus 202 -~-qTLSFy~LsG~--~Igk~r~L~FdP~CisYf~NGE-----y~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~ 271 (1081)
T KOG1538|consen 202 -G-QTLSFYQLSGK--QIGKDRALNFDPCCISYFTNGE-----YILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQA 271 (1081)
T ss_pred -c-ceeEEEEecce--eecccccCCCCchhheeccCCc-----EEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEE
Confidence 0 11222 12222 1112223345556788888998 899999999999996 557788888878889999999
Q ss_pred eCCCCEEEEEeCCC-EEEEEec
Q psy467 331 SEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 331 SpdG~~Lasgs~DG-I~IWDl~ 351 (845)
.|++++++.|+.|| |..|++-
T Consensus 272 ~PNsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 272 KPNSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred ccCCceEEEEEccCeeehhhhH
Confidence 99999999999999 9988853
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-16 Score=171.22 Aligned_cols=156 Identities=19% Similarity=0.382 Sum_probs=136.7
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECCCC
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~tg 90 (845)
.+|++.|.+|+|+....+.||+|+.|.+|++||+.++++..++..|...|.+++|+| ...+|++|+.|++|.+.|.+..
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~ 319 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDP 319 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCc
Confidence 379999999999987788999999999999999999999999999999999999999 4678999999999999999842
Q ss_pred cE-EEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecC-CCEEEEEeCCCcE
Q psy467 91 TV-QRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPD-GQWIASGGEDGVV 166 (845)
Q Consensus 91 ~~-v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPd-g~~Lasgs~DG~I 166 (845)
.. -..++ ..+.|..++|.|.. ..++++..||+|+-+|++.. +++++++.|.++|.++++++. ..++++++.|+.+
T Consensus 320 ~~s~~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~V 398 (463)
T KOG0270|consen 320 SNSGKEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVV 398 (463)
T ss_pred cccCceEE-eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceE
Confidence 21 12222 35678999999965 56788889999999999875 899999999999999999984 5678999999999
Q ss_pred EE
Q psy467 167 RI 168 (845)
Q Consensus 167 ~I 168 (845)
++
T Consensus 399 kl 400 (463)
T KOG0270|consen 399 KL 400 (463)
T ss_pred EE
Confidence 99
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-15 Score=160.34 Aligned_cols=289 Identities=18% Similarity=0.224 Sum_probs=194.1
Q ss_pred CCCeEEEEEcCCCC-EEEEEECCCcEEEEECCCC---------cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEE
Q psy467 58 STPVESVQFGNGEE-TLSAGCQSGSIKIWNLAVP---------TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127 (845)
Q Consensus 58 ~~~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg---------~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IW 127 (845)
..+|..+.|.++.. .|++|+.|..|++|.+..+ +....+..|...|+++.|+|+|..|++|+.+|.|.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW 92 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW 92 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence 46899999998766 9999999999999988643 1234567899999999999999999999999999999
Q ss_pred ECC--------C--------CceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCC
Q psy467 128 DLR--------R--------KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG 191 (845)
Q Consensus 128 Dl~--------t--------~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~ 191 (845)
... + ......+.+|...|..++|+||++++++++.|..+++ ||+..|....
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l-------------~Dv~~G~l~~ 159 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRL-------------WDVHAGQLLA 159 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEE-------------EEeccceeEe
Confidence 765 2 1234556779999999999999999999999999999 9999998876
Q ss_pred CCC--CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc-cCCCceeEEEcCCCCcCCC
Q psy467 192 TPP--PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI-ANPCDYSAIFQPHRSLNRS 268 (845)
Q Consensus 192 ~~~--~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~-~~~~~~~l~fspdg~~~~~ 268 (845)
... ...+..++|.|-++++......... . +..+.......... ...+.... ............|+.
T Consensus 160 ~~~dh~~yvqgvawDpl~qyv~s~s~dr~~-~-----~~~~~~~~~~~~~~-~~~m~~~~~~~~e~~s~rLfhDeT---- 228 (434)
T KOG1009|consen 160 ILDDHEHYVQGVAWDPLNQYVASKSSDRHP-E-----GFSAKLKQVIKRHG-LDIMPAKAFNEREGKSTRLFHDET---- 228 (434)
T ss_pred eccccccccceeecchhhhhhhhhccCccc-c-----eeeeeeeeeeeeee-eeEeeecccCCCCcceeeeeecCc----
Confidence 553 6778899999988887765443311 0 11100000000000 00000000 000001111111111
Q ss_pred CcccccccCceeEEEcCCCCcccceEEEEEeC----C-----CeEEEEECCC-CeEEEEecCCCCCEEEEEEeC------
Q psy467 269 GTCVPVSVSRTSLSILPQSPMLCFILTTSSSA----D-----RTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSE------ 332 (845)
Q Consensus 269 ~~~~~~~~~I~slafSPdg~~~~~~lLatgs~----D-----G~I~IWDl~s-~~~l~tl~gh~~~VtslafSp------ 332 (845)
...-...++|+|||. ++++.+. . +..++|+-.. .++...+.+...++..+.|+|
T Consensus 229 -----lksFFrRlsfTPdG~-----llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elr 298 (434)
T KOG1009|consen 229 -----LKSFFRRLSFTPDGS-----LLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELR 298 (434)
T ss_pred -----hhhhhhhcccCCCCc-----EEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEec
Confidence 112234677888887 6666432 1 2345555432 234555555555666666654
Q ss_pred ------------CCCEEEEEeCCCEEEEEecCCceEEEecC-CCCCeEEEEEc-CCceEEEE
Q psy467 333 ------------GGECLLGGDTEGLKVYGWEPARQYDAQPM-GWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 333 ------------dG~~Lasgs~DGI~IWDl~tgk~l~tl~~-h~~~VtsVafS-dg~lLaaS 380 (845)
-+-.+|.++.+.|.|||.++...+..... |...|++++|+ ||..+++|
T Consensus 299 p~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vS 360 (434)
T KOG1009|consen 299 PLSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVS 360 (434)
T ss_pred cccccccccccccceEEEEeecceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEe
Confidence 23456788888899999999888766654 88999999999 88888888
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.7e-14 Score=163.86 Aligned_cols=335 Identities=16% Similarity=0.227 Sum_probs=224.6
Q ss_pred eEEeccCCCcEEEEEEecCCC--CEEEEEeCCCeEEEEECCCCeeEEEec------------------------------
Q psy467 8 AEDFMAHGASVNCLALGKKSG--QVLATGGDDKKVNLWALGKSNCIMSLS------------------------------ 55 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg--~~LaTgs~DG~I~IWdl~t~~~i~~l~------------------------------ 55 (845)
++.|.+|..+++.+.+.|... .++++++.||.|++||...+..++++.
T Consensus 50 i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~ 129 (792)
T KOG1963|consen 50 ITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSI 129 (792)
T ss_pred hhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeeccccee
Confidence 457889999999999988544 577799999999999987665443332
Q ss_pred -------------------------------------------------------------------------CCCCCeE
Q psy467 56 -------------------------------------------------------------------------GHSTPVE 62 (845)
Q Consensus 56 -------------------------------------------------------------------------~h~~~V~ 62 (845)
.|...++
T Consensus 130 ~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t 209 (792)
T KOG1963|consen 130 LTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNIT 209 (792)
T ss_pred eeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEeeeEEEEEecccceeeccchhhhhhcccce
Confidence 1556689
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCC----CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE
Q psy467 63 SVQFGNGEETLSAGCQSGSIKIWNLAV----PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 63 sLafSpdg~~LaSgs~DGtV~VWDl~t----g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~ 138 (845)
|.++||+++++|+|..||.|.+|.--. ......+.-|...|.+++|+++|.+|++|+..|.+.+|.+.+++ .+-+
T Consensus 210 ~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfL 288 (792)
T KOG1963|consen 210 CVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFL 288 (792)
T ss_pred eEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccc
Confidence 999999999999999999999996432 13346677788999999999999999999999999999999987 3444
Q ss_pred cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC---CC----------CCCCcceeecC
Q psy467 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT---PP----------PQYTSSVPFSH 205 (845)
Q Consensus 139 ~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~---~~----------~~~i~svs~sp 205 (845)
..-.++|..+.++||+.+.+....|+.|.+ ....+...... +. ..-...+.+.|
T Consensus 289 PRLgs~I~~i~vS~ds~~~sl~~~DNqI~l-------------i~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idp 355 (792)
T KOG1963|consen 289 PRLGSPILHIVVSPDSDLYSLVLEDNQIHL-------------IKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDP 355 (792)
T ss_pred cccCCeeEEEEEcCCCCeEEEEecCceEEE-------------EeccchhhhhhccCccCCCccccccccccceeEEEcC
Confidence 456789999999999999999999999999 54433222111 11 12233455555
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
..+ ...+.+|... +..+++ ..+.....+....... ..+ ...+...+++++.+-
T Consensus 356 r~~-~~vln~~~g~-----vQ~ydl------------------~td~~i~~~~v~~~n~--~~~-~~n~~v~itav~~~~ 408 (792)
T KOG1963|consen 356 RTN-SLVLNGHPGH-----VQFYDL------------------YTDSTIYKLQVCDENY--SDG-DVNIQVGITAVARSR 408 (792)
T ss_pred CCC-ceeecCCCce-----EEEEec------------------cccceeeeEEEEeecc--cCC-cceeEEeeeeehhhc
Confidence 222 2223333332 111111 1111111111111100 000 013345667777777
Q ss_pred CCCcccceEEEEEe--------CC--CeEEEEECCCC----eEEEEe-cCCCCCEEEEEEeC-CCC-EEEEEeCCC-EEE
Q psy467 286 QSPMLCFILTTSSS--------AD--RTVNFWDLEKF----SLVSTT-EKNSSTIRRLTFSE-GGE-CLLGGDTEG-LKV 347 (845)
Q Consensus 286 dg~~~~~~lLatgs--------~D--G~I~IWDl~s~----~~l~tl-~gh~~~VtslafSp-dG~-~Lasgs~DG-I~I 347 (845)
.|. +++|+. .| -.+++|-.... .+...+ ..|...+...++.+ ... ..++++.|| ++|
T Consensus 409 ~gs-----~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~Ki 483 (792)
T KOG1963|consen 409 FGS-----WMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKI 483 (792)
T ss_pred cce-----EEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEE
Confidence 777 788764 22 35788976543 333333 36777666666654 333 788999999 999
Q ss_pred EEecCC----------ceEEEecCCCCCeEEEEEc-CCceEEEE----EEEEeeCC
Q psy467 348 YGWEPA----------RQYDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQD 388 (845)
Q Consensus 348 WDl~tg----------k~l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d~ 388 (845)
|-+... .|...-.-|..++++.+|+ ||.+|+++ +.+|..+.
T Consensus 484 W~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 484 WVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVSFDDTITIWDYDT 539 (792)
T ss_pred EEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEecCCEEEEecCCC
Confidence 998432 2322222378899999999 99999999 99998665
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-13 Score=151.87 Aligned_cols=264 Identities=13% Similarity=0.199 Sum_probs=171.3
Q ss_pred EEEEeCCCeEEEEECCC-Ce--eEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECC-CCcE--EEEEcCCCCCe
Q psy467 31 LATGGDDKKVNLWALGK-SN--CIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLA-VPTV--QRTLNGHKSSI 103 (845)
Q Consensus 31 LaTgs~DG~I~IWdl~t-~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~-tg~~--v~~l~~h~~~V 103 (845)
+++...++.|.+|++.+ ++ .+..+. +......++++|++++|++++ .++.|.+|+++ ++.. +.... ..+..
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p 82 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSP 82 (330)
T ss_pred EEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCc
Confidence 33446789999999964 33 445554 446678899999999987765 47899999997 3432 23332 33456
Q ss_pred EEEEEccCCCEEEEEEC-CCeEEEEECCCCc----eEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCc
Q psy467 104 TSVDFHPYGDYLCSGSL-DSFIKLWDLRRKG----CIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNT 177 (845)
Q Consensus 104 ~~lafspdg~~Lasgs~-DG~I~IWDl~t~~----~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~ 177 (845)
..++|+|+++++++++. ++.|.+|++.+.. .+..+. +.....+++++|+++++++++ .++.|.+
T Consensus 83 ~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v--------- 152 (330)
T PRK11028 83 THISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRL--------- 152 (330)
T ss_pred eEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEE---------
Confidence 78999999998888764 7899999996432 223232 234567789999999886555 5688999
Q ss_pred eeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeE
Q psy467 178 SIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSA 257 (845)
Q Consensus 178 ~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l 257 (845)
||+.+...+. ..... . +
T Consensus 153 ----~d~~~~g~l~--------------------~~~~~--~-------~------------------------------ 169 (330)
T PRK11028 153 ----FTLSDDGHLV--------------------AQEPA--E-------V------------------------------ 169 (330)
T ss_pred ----EEECCCCccc--------------------ccCCC--c-------e------------------------------
Confidence 9987633310 00000 0 0
Q ss_pred EEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC-CCeEEEEECCC--C--eEEEEecCC------CCCEE
Q psy467 258 IFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA-DRTVNFWDLEK--F--SLVSTTEKN------SSTIR 326 (845)
Q Consensus 258 ~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~-DG~I~IWDl~s--~--~~l~tl~gh------~~~Vt 326 (845)
.. +.+ .....++|+|||+ +++++.. ++.|.+||+.. + +.+..+..+ .....
T Consensus 170 ~~-~~g------------~~p~~~~~~pdg~-----~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 231 (330)
T PRK11028 170 TT-VEG------------AGPRHMVFHPNQQ-----YAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAA 231 (330)
T ss_pred ec-CCC------------CCCceEEECCCCC-----EEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccce
Confidence 00 000 0123445555555 6666554 89999999973 3 334444321 12344
Q ss_pred EEEEeCCCCEEEEEeC-CC-EEEEEecCCc----eEEEecCCCCCeEEEEEc-CCceEEEE------EEEEeeCC
Q psy467 327 RLTFSEGGECLLGGDT-EG-LKVYGWEPAR----QYDAQPMGWGKVQDLAVT-GTQLWFRR------VGTWSHQD 388 (845)
Q Consensus 327 slafSpdG~~Lasgs~-DG-I~IWDl~tgk----~l~tl~~h~~~VtsVafS-dg~lLaaS------VsiW~~d~ 388 (845)
.+.++|+|++|+++.. ++ |.+|+++... .+..+... ...++++|+ +|++|+++ |.+|.++.
T Consensus 232 ~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~-~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 232 DIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTE-TQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG 305 (330)
T ss_pred eEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecc-ccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence 6899999999999865 44 9999997543 22332221 356789999 99999987 89998764
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-15 Score=158.87 Aligned_cols=166 Identities=22% Similarity=0.343 Sum_probs=140.5
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC-------eeEEEecCCCCCeEEEEEcCC-CCEEEEEECCCc
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-------NCIMSLSGHSTPVESVQFGNG-EETLSAGCQSGS 81 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~-------~~i~~l~~h~~~V~sLafSpd-g~~LaSgs~DGt 81 (845)
.+.||+++|..++|+|-+...+|+|++|.+|.||++..+ +.+..+.+|...|-.++|+|. .+.|++++.|++
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 467999999999999989999999999999999998654 356778899999999999995 567899999999
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCC-CeEEEEEecCCCEEEEE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK-SINSIRFSPDGQWIASG 160 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~-~V~sLafSPdg~~Lasg 160 (845)
|.+||+.+|+.+.++. |..-|.++.|+-||.+|++++.|..|+|||.++++.+..-.+|.+ .-..+.|-.+|..+-+|
T Consensus 156 v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTG 234 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTG 234 (472)
T ss_pred EEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeec
Confidence 9999999999998888 999999999999999999999999999999999999988877765 33456677788844444
Q ss_pred e---CCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 161 G---EDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 161 s---~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
. .+.++-+ ||..+...
T Consensus 235 fsr~seRq~aL-------------wdp~nl~e 253 (472)
T KOG0303|consen 235 FSRMSERQIAL-------------WDPNNLEE 253 (472)
T ss_pred cccccccceec-------------cCcccccC
Confidence 2 2444555 88765444
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.3e-15 Score=153.26 Aligned_cols=246 Identities=22% Similarity=0.345 Sum_probs=188.0
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCC-------CeEEEEECCCC---------eeEEEec-CCCCCeEEEEEcCCCC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDD-------KKVNLWALGKS---------NCIMSLS-GHSTPVESVQFGNGEE 71 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~D-------G~I~IWdl~t~---------~~i~~l~-~h~~~V~sLafSpdg~ 71 (845)
+.|..|.+.|+.++-+|.+.++|+|+..+ ..+-||.+... +++..+. .+-+.|.|+.|.|++.
T Consensus 57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~ 136 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSD 136 (370)
T ss_pred hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCC
Confidence 45778899999999999888888887542 24779998532 2333343 3556899999999999
Q ss_pred EEEEEECCCcEEEEECCCCcE-EEEEc-----CCCCCeEEEEEcc--CCCEEEEEECCCeEEEEECCCCceEEEEc-CCC
Q psy467 72 TLSAGCQSGSIKIWNLAVPTV-QRTLN-----GHKSSITSVDFHP--YGDYLCSGSLDSFIKLWDLRRKGCIYTYR-GHS 142 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~-v~~l~-----~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWDl~t~~~l~~~~-~h~ 142 (845)
.+++-. |..|.+|+++.... +..+. .+....++-+|+| +++.+++.+ |+++..||+++..+...+. +|.
T Consensus 137 klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHg 214 (370)
T KOG1007|consen 137 KLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHG 214 (370)
T ss_pred eeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-CCcEEEEEccchhhhcchhhhhc
Confidence 999885 89999999988755 33332 2455678889998 777777664 7899999999988877775 588
Q ss_pred CCeEEEEEecCCC-EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCc
Q psy467 143 KSINSIRFSPDGQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGT 221 (845)
Q Consensus 143 ~~V~sLafSPdg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~ 221 (845)
..|..+.|.|+.+ +|++|+.||.|++ ||.+..+. .+..+.+|...
T Consensus 215 q~vrdlDfNpnkq~~lvt~gDdgyvri-------------WD~R~tk~-------------------pv~el~~HsHW-- 260 (370)
T KOG1007|consen 215 QRVRDLDFNPNKQHILVTCGDDGYVRI-------------WDTRKTKF-------------------PVQELPGHSHW-- 260 (370)
T ss_pred ceeeeccCCCCceEEEEEcCCCccEEE-------------EeccCCCc-------------------cccccCCCceE--
Confidence 8899999999865 5889999999999 99987554 16667777777
Q ss_pred cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 222 KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 222 ~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
+ +++.|+|... .++.+|+.|
T Consensus 261 -----v---------------------------W~VRfn~~hd----------------------------qLiLs~~SD 280 (370)
T KOG1007|consen 261 -----V---------------------------WAVRFNPEHD----------------------------QLILSGGSD 280 (370)
T ss_pred -----E---------------------------EEEEecCccc----------------------------eEEEecCCC
Confidence 7 7777877654 188999999
Q ss_pred CeEEEEECCC-----------------------------CeEEEEecCCCCCEEEEEEeCCCCE-EEEEeCCC-EEEEEe
Q psy467 302 RTVNFWDLEK-----------------------------FSLVSTTEKNSSTIRRLTFSEGGEC-LLGGDTEG-LKVYGW 350 (845)
Q Consensus 302 G~I~IWDl~s-----------------------------~~~l~tl~gh~~~VtslafSpdG~~-Lasgs~DG-I~IWDl 350 (845)
..|.+|...+ ...+.++..|...|.+++||.-..+ +|+-+.|| +.|=.+
T Consensus 281 s~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V 360 (370)
T KOG1007|consen 281 SAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSV 360 (370)
T ss_pred ceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecC
Confidence 9999996532 0134567789999999999986665 56778999 665443
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-14 Score=161.05 Aligned_cols=276 Identities=20% Similarity=0.247 Sum_probs=194.4
Q ss_pred eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCC--EEEEEECCCeEEEE
Q psy467 50 CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSLDSFIKLW 127 (845)
Q Consensus 50 ~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~--~Lasgs~DG~I~IW 127 (845)
+...+.+|++.|.||...|.|.+|++|+.||+|+||.+.+|.+++++. ..+.|.|++|+|.++ .||++-. ..+.|.
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~-~~~~iv 469 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVG-ECVLIV 469 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEec-CceEEe
Confidence 345678999999999999999999999999999999999999999987 566899999999764 3443332 224443
Q ss_pred ECCCC---------------------------------c----eEEEEcCCCCCeEEEEEecCCCEEEEEeCCC---cEE
Q psy467 128 DLRRK---------------------------------G----CIYTYRGHSKSINSIRFSPDGQWIASGGEDG---VVR 167 (845)
Q Consensus 128 Dl~t~---------------------------------~----~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG---~I~ 167 (845)
+..-| . -+...-.|...|..+.|+..|.||++...++ .|.
T Consensus 470 np~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~Vl 549 (733)
T KOG0650|consen 470 NPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVL 549 (733)
T ss_pred CccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEE
Confidence 32111 0 0112224778899999999999999987643 455
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCC--CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPP--PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~--~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
| +++........+. ...+..+.|+|....+.....+.-. ++++.. .++
T Consensus 550 i-------------HQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vR-------iYdL~k----------qel 599 (733)
T KOG0650|consen 550 I-------------HQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVR-------IYDLSK----------QEL 599 (733)
T ss_pred E-------------EecccccccCchhhcCCceeEEEecCCCceEEEEeccceE-------EEehhH----------HHH
Confidence 5 8887666543332 5667778888877665554332211 322211 000
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC-eEEEEecCCCCC
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF-SLVSTTEKNSST 324 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~l~tl~gh~~~ 324 (845)
....+.....|..++++|.|. -|+.|+.|+.+..||+.-. ++.+++.-|...
T Consensus 600 ----------------------vKkL~tg~kwiS~msihp~GD-----nli~gs~d~k~~WfDldlsskPyk~lr~H~~a 652 (733)
T KOG0650|consen 600 ----------------------VKKLLTGSKWISSMSIHPNGD-----NLILGSYDKKMCWFDLDLSSKPYKTLRLHEKA 652 (733)
T ss_pred ----------------------HHHHhcCCeeeeeeeecCCCC-----eEEEecCCCeeEEEEcccCcchhHHhhhhhhh
Confidence 111122234567788888887 7899999999999999754 677888899999
Q ss_pred EEEEEEeCCCCEEEEEeCCC-EEEEEe------cCC---ceEEEecCCCCC----eEEEEEc-CCceEEEE-----EEEE
Q psy467 325 IRRLTFSEGGECLLGGDTEG-LKVYGW------EPA---RQYDAQPMGWGK----VQDLAVT-GTQLWFRR-----VGTW 384 (845)
Q Consensus 325 VtslafSpdG~~Lasgs~DG-I~IWDl------~tg---k~l~tl~~h~~~----VtsVafS-dg~lLaaS-----VsiW 384 (845)
+++++|++.-.++++|+.|| +.||.- -.. -.+..+.+|... |.++.|+ .--+|+++ +.+|
T Consensus 653 vr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 653 VRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred hhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 99999999999999999999 777642 111 134677888755 9999999 45555554 5555
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=4e-14 Score=143.16 Aligned_cols=268 Identities=17% Similarity=0.203 Sum_probs=192.9
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCC----------CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGK----------SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t----------~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
..|.+-+|+| .+++|+.|+.+|.|-+..+.+ ...+...++|..+|+.++|. ..+|++|+ ||.|+=|
T Consensus 11 ~tvf~qa~sp-~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw 86 (325)
T KOG0649|consen 11 NTVFAQAISP-SKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGW 86 (325)
T ss_pred HHHHHHhhCC-cceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEe
Confidence 3567778999 999999999999999998742 23455668999999999998 35677775 6999999
Q ss_pred ECCCCcE------EEEE--cCC-----CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 86 NLAVPTV------QRTL--NGH-----KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 86 Dl~tg~~------v~~l--~~h-----~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
.++.... .... .-| -..|+++...|..+-++.++.|+.++.||+++|+..+.+++|...|.++.-..
T Consensus 87 ~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~ 166 (325)
T KOG0649|consen 87 EWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRN 166 (325)
T ss_pred eehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecc
Confidence 8864322 1111 112 24688999999888788888999999999999999999999999999999866
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
....+++|++||++++ ||.++++. +..+......
T Consensus 167 ~~~qilsG~EDGtvRv-------------Wd~kt~k~--------------------v~~ie~yk~~------------- 200 (325)
T KOG0649|consen 167 ANGQILSGAEDGTVRV-------------WDTKTQKH--------------------VSMIEPYKNP------------- 200 (325)
T ss_pred cCcceeecCCCccEEE-------------Eeccccce--------------------eEEeccccCh-------------
Confidence 5667999999999999 99999998 4443322221
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
-...|+ ....|.+++.+.| ++++|+. ..+.+|+++..
T Consensus 201 ------------------------~~lRp~-----------~g~wigala~~ed-------WlvCGgG-p~lslwhLrss 237 (325)
T KOG0649|consen 201 ------------------------NLLRPD-----------WGKWIGALAVNED-------WLVCGGG-PKLSLWHLRSS 237 (325)
T ss_pred ------------------------hhcCcc-----------cCceeEEEeccCc-------eEEecCC-CceeEEeccCC
Confidence 001111 1123445555554 8888764 56899999998
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc--CCceEEEE
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS--dg~lLaaS 380 (845)
++..++.- ...|..+.|..| .+++++... |.-|.+. |..-..........+...|+ +-++|.++
T Consensus 238 e~t~vfpi-pa~v~~v~F~~d--~vl~~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~a 304 (325)
T KOG0649|consen 238 ESTCVFPI-PARVHLVDFVDD--CVLIGGEGNHVQSYTLN-GVLQANIPVESTACYSASWQTSPIKFISIA 304 (325)
T ss_pred CceEEEec-ccceeEeeeecc--eEEEeccccceeeeeec-cEEEEeccCCccceeeecccCCceEEEEec
Confidence 88777763 456888888655 677777666 8888874 34434445555556666666 44555443
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-15 Score=161.48 Aligned_cols=255 Identities=22% Similarity=0.283 Sum_probs=184.8
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
.-|..|+++|.+|.|+|.+...+++.+.||+|++-|++.... +..+......+..+.|+.+...++.+..=|...+||
T Consensus 228 ~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD 307 (498)
T KOG4328|consen 228 YLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVID 307 (498)
T ss_pred EEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEE
Confidence 358899999999999998888999999999999999976543 333433556677888988888888888888999999
Q ss_pred CCCCcE-EEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCce----EEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 87 LAVPTV-QRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGC----IYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 87 l~tg~~-v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~----l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
++++.. ...+..|...|+.++++|.. .+|+|++.|++.+|||++.-.. +.....|...|.+..|||++..|++.
T Consensus 308 ~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT 387 (498)
T KOG4328|consen 308 LRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTT 387 (498)
T ss_pred eecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEee
Confidence 998654 56667788899999999966 5789999999999999975322 23334599999999999988889999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
+.|..|++ ||..-... .-..+.++. |...
T Consensus 388 ~~D~~IRv-------------~dss~~sa----------------~~~p~~~I~-Hn~~--------------------- 416 (498)
T KOG4328|consen 388 CQDNEIRV-------------FDSSCISA----------------KDEPLGTIP-HNNR--------------------- 416 (498)
T ss_pred ccCCceEE-------------eecccccc----------------cCCccceee-ccCc---------------------
Confidence 99999999 98741100 000011110 1100
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
.++| -.....+|.|+.. ++++|..-..|-|||-..++.+..+..
T Consensus 417 ---------------------t~Rw----------lT~fKA~W~P~~~-----li~vg~~~r~IDv~~~~~~q~v~el~~ 460 (498)
T KOG4328|consen 417 ---------------------TGRW----------LTPFKAAWDPDYN-----LIVVGRYPRPIDVFDGNGGQMVCELHD 460 (498)
T ss_pred ---------------------cccc----------ccchhheeCCCcc-----EEEEeccCcceeEEcCCCCEEeeeccC
Confidence 0000 0112234445444 999999999999999999988887654
Q ss_pred C-CCCEEE-EEEeCCCCEEEEEeCCC--EEEEEe
Q psy467 321 N-SSTIRR-LTFSEGGECLLGGDTEG--LKVYGW 350 (845)
Q Consensus 321 h-~~~Vts-lafSpdG~~Lasgs~DG--I~IWDl 350 (845)
. ...|.+ ..|+|-+..+++|+.-+ |+||--
T Consensus 461 P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~ 494 (498)
T KOG4328|consen 461 PESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTN 494 (498)
T ss_pred ccccccccceeecccccceeccCCccceEEEEec
Confidence 3 224544 47999888666666554 666643
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.8e-14 Score=152.49 Aligned_cols=277 Identities=14% Similarity=0.271 Sum_probs=195.1
Q ss_pred EecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECCCC-------cEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCe
Q psy467 53 SLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLAVP-------TVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSF 123 (845)
Q Consensus 53 ~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~tg-------~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~ 123 (845)
.+.+|+++|..++|+| +...||+|+.|.+|.||++..+ +++..+.+|...|-.+.|+|.. +.|++++.|.+
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 3468999999999999 6678999999999999998654 4567788999999999999965 68899999999
Q ss_pred EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceee
Q psy467 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 124 I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~ 203 (845)
|.+|++.+++.+.++. |...|.++.|+.||.+|++.+.|..|++ ||.++++.
T Consensus 156 v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv-------------~dpr~~~~-------------- 207 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRV-------------IDPRRGTV-------------- 207 (472)
T ss_pred EEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEE-------------EcCCCCcE--------------
Confidence 9999999999999988 9999999999999999999999999999 99999988
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
+..-.+|.+... ....|-.++.
T Consensus 208 ------v~e~~~heG~k~---------------------------------~Raifl~~g~------------------- 229 (472)
T KOG0303|consen 208 ------VSEGVAHEGAKP---------------------------------ARAIFLASGK------------------- 229 (472)
T ss_pred ------eeecccccCCCc---------------------------------ceeEEeccCc-------------------
Confidence 555555554300 3344555555
Q ss_pred cCCCCcccceEEEEEe---CCCeEEEEECCCCe---EEEEecCCCCCEEEEEEeCCCCEEEEEe-CCC-EEEEEecCCce
Q psy467 284 LPQSPMLCFILTTSSS---ADRTVNFWDLEKFS---LVSTTEKNSSTIRRLTFSEGGECLLGGD-TEG-LKVYGWEPARQ 355 (845)
Q Consensus 284 SPdg~~~~~~lLatgs---~DG~I~IWDl~s~~---~l~tl~gh~~~VtslafSpdG~~Lasgs-~DG-I~IWDl~tgk~ 355 (845)
++.||. ++..+-+||..+.+ ...++.. .+.|.--.|.+|..+|+.++ .|+ |+-|.+.....
T Consensus 230 ----------i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P 298 (472)
T KOG0303|consen 230 ----------IFTTGFSRMSERQIALWDPNNLEEPIALQELDT-SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPP 298 (472)
T ss_pred ----------eeeeccccccccceeccCcccccCcceeEEecc-CCceEEeeecCCCCEEEEEecCCcceEEEEecCCCc
Confidence 555553 56789999976643 3445554 45677788899988887655 566 99999987653
Q ss_pred E-EEecC--CCCCeEEEEEcCCceEEEE-----------------EEEEeeCCCCCccccCCCCCC-CCCCCCCCccccc
Q psy467 356 Y-DAQPM--GWGKVQDLAVTGTQLWFRR-----------------VGTWSHQDSGFSTLDSYSAGS-PVSTMGRERDQIV 414 (845)
Q Consensus 356 l-~tl~~--h~~~VtsVafSdg~lLaaS-----------------VsiW~~d~~~~~~~~~~~~~~-p~~~~~~~~~~~v 414 (845)
. .-+.. ...+=+++.|-+.+-+-++ ++......+.+.+.+-||.-+ |...+ +..+++
T Consensus 299 ~~hyln~f~S~epQRG~g~mPKRGl~Vs~cEI~rfyKl~~~~~epIsm~VPRkSdlFQeDlYPdt~~~~paL--tAEEW~ 376 (472)
T KOG0303|consen 299 FVHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLHERKCEPISMTVPRKSDLFQEDLYPDTPGPEPAL--TAEEWL 376 (472)
T ss_pred eeEEecccccCCccccccccccccccchHHHHHHHHHhhcceeeeEEEeccccchhhhhccCCCCCCCCccc--cHHHhh
Confidence 2 22221 2234455555533333333 344444455555555555321 22112 222344
Q ss_pred cCCCCCCccCCccc
Q psy467 415 PMNLSAPIGLDMEQ 428 (845)
Q Consensus 415 p~~~~~~~~~d~~~ 428 (845)
......|+.++|..
T Consensus 377 sGkda~Pilisl~~ 390 (472)
T KOG0303|consen 377 SGKDADPILISLRD 390 (472)
T ss_pred cCCCCCCeEEEccc
Confidence 44444555555533
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-15 Score=154.46 Aligned_cols=248 Identities=16% Similarity=0.252 Sum_probs=180.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-CCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
...|++|.+.|+|+.|-. + .+|.+|..-|.|.+|++.+......+. .|...|+.+.--|+ ..|.+-+.|+.+.+|+
T Consensus 7 ~fvLRp~~~~v~s~~fqa-~-~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ 83 (323)
T KOG0322|consen 7 FFVLRPHSSSVTSVLFQA-N-ERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWT 83 (323)
T ss_pred eeEeccccchheehhhcc-c-hhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEE
Confidence 345779999999999976 4 458999999999999999988887777 57888999998887 5677777999999999
Q ss_pred CCCCcEEE--------------EE-------------c--------------------------CCCCCeEEEEEcc-CC
Q psy467 87 LAVPTVQR--------------TL-------------N--------------------------GHKSSITSVDFHP-YG 112 (845)
Q Consensus 87 l~tg~~v~--------------~l-------------~--------------------------~h~~~V~~lafsp-dg 112 (845)
+.-...+. .+ . +..+.+.|..+.. ++
T Consensus 84 ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~ 163 (323)
T KOG0322|consen 84 IAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACG 163 (323)
T ss_pred ccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccccc
Confidence 86422111 00 0 0112345555433 33
Q ss_pred C--EEEEEECCCeEEEEECCCCceE----------EEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeE
Q psy467 113 D--YLCSGSLDSFIKLWDLRRKGCI----------YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIH 180 (845)
Q Consensus 113 ~--~Lasgs~DG~I~IWDl~t~~~l----------~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~ 180 (845)
. ++++|.++|.+.+||+.++..+ .....|..+|.++.+.+.-..=++|+.+..+..
T Consensus 164 s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~------------ 231 (323)
T KOG0322|consen 164 STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVM------------ 231 (323)
T ss_pred ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCcccccee------------
Confidence 3 4567889999999999987433 334468889999999876555677777777777
Q ss_pred EEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEc
Q psy467 181 VVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQ 260 (845)
Q Consensus 181 vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fs 260 (845)
|++......-.. -.... ..++....+.+.
T Consensus 232 -~Sl~~s~gslq~----------------~~e~~----------------------------------lknpGv~gvrIR 260 (323)
T KOG0322|consen 232 -YSLNHSTGSLQI----------------RKEIT----------------------------------LKNPGVSGVRIR 260 (323)
T ss_pred -eeeccccCcccc----------------cceEE----------------------------------ecCCCccceEEc
Confidence 766432110000 00000 011111344445
Q ss_pred CCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEE
Q psy467 261 PHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG 340 (845)
Q Consensus 261 pdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasg 340 (845)
||++ ++|+++.|+.|+||+.++..++..+.-|...|++++|+|+...+|++
T Consensus 261 pD~K-----------------------------IlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaa 311 (323)
T KOG0322|consen 261 PDGK-----------------------------ILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAA 311 (323)
T ss_pred cCCc-----------------------------EEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhc
Confidence 5555 99999999999999999999999999999999999999999999999
Q ss_pred eCCC-EEEEEe
Q psy467 341 DTEG-LKVYGW 350 (845)
Q Consensus 341 s~DG-I~IWDl 350 (845)
+.|+ |.+|++
T Consensus 312 skD~rISLWkL 322 (323)
T KOG0322|consen 312 SKDARISLWKL 322 (323)
T ss_pred cCCceEEeeec
Confidence 9999 999986
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.9e-15 Score=153.76 Aligned_cols=240 Identities=19% Similarity=0.287 Sum_probs=184.1
Q ss_pred CcEEEEEEe-------cCCCCEEEEEeCCCeEEEEECCCCeeEEEecC--CCC---CeEEEEEcCCCCEEEEEECCCcEE
Q psy467 16 ASVNCLALG-------KKSGQVLATGGDDKKVNLWALGKSNCIMSLSG--HST---PVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 16 ~~V~~LafS-------p~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~--h~~---~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
..|...+|= | +..++|+.+.+.-|++||.-+|+....+.+ |.+ .-.+++|+|||.+|++| ....|+
T Consensus 105 ~tvydy~wYs~M~s~qP-~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcir 182 (406)
T KOG2919|consen 105 ETVYDYCWYSRMKSDQP-STNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIR 182 (406)
T ss_pred CEEEEEEeeeccccCCC-ccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEE
Confidence 356666663 4 678999999999999999999988776653 333 45689999999999988 578999
Q ss_pred EEEC-CCCcEE---EEEc----CCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC
Q psy467 84 IWNL-AVPTVQ---RTLN----GHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 84 VWDl-~tg~~v---~~l~----~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg 154 (845)
++|+ +.|+.. .++. +..+-+.|++|+|-. +.+++|+....+-||.-..+.++..+.+|.+.|+.++|.++|
T Consensus 183 vFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edG 262 (406)
T KOG2919|consen 183 VFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDG 262 (406)
T ss_pred EeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCc
Confidence 9999 444322 1221 235678999999955 589999999999999888889999999999999999999999
Q ss_pred CEEEEEeC-CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccc
Q psy467 155 QWIASGGE-DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEEN 233 (845)
Q Consensus 155 ~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~ 233 (845)
+.|++|.. |..|.. ||++.-... +..+.+|... -
T Consensus 263 n~lfsGaRk~dkIl~-------------WDiR~~~~p-------------------v~~L~rhv~~-------T------ 297 (406)
T KOG2919|consen 263 NKLFSGARKDDKILC-------------WDIRYSRDP-------------------VYALERHVGD-------T------ 297 (406)
T ss_pred CeecccccCCCeEEE-------------Eeehhccch-------------------hhhhhhhccC-------c------
Confidence 99999874 567777 999864430 3344444332 0
Q ss_pred ccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-C
Q psy467 234 AESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-F 312 (845)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~ 312 (845)
..+..+...|++. +|++|+.||.|++||+++ +
T Consensus 298 ------------------NQRI~FDld~~~~-----------------------------~LasG~tdG~V~vwdlk~~g 330 (406)
T KOG2919|consen 298 ------------------NQRILFDLDPKGE-----------------------------ILASGDTDGSVRVWDLKDLG 330 (406)
T ss_pred ------------------cceEEEecCCCCc-----------------------------eeeccCCCccEEEEecCCCC
Confidence 0002233445555 999999999999999998 7
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEec
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~ 351 (845)
..+..+..|...|+.++++|--.++|+++.. ++|...
T Consensus 331 n~~sv~~~~sd~vNgvslnP~mpilatssGq--r~f~~~ 367 (406)
T KOG2919|consen 331 NEVSVTGNYSDTVNGVSLNPIMPILATSSGQ--RIFKYP 367 (406)
T ss_pred CcccccccccccccceecCcccceeeeccCc--eeecCC
Confidence 7788888899999999999998888888776 455443
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.9e-14 Score=163.99 Aligned_cols=232 Identities=19% Similarity=0.135 Sum_probs=161.0
Q ss_pred CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCC
Q psy467 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS---GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D---GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~ 113 (845)
+..|.+||..... .+.+..|...+.+.+|+|||+.|+.++.+ ..|.+||+.+++.... ....+....++|+|||+
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~~~g~~~~~~wSPDG~ 260 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV-ASFRGHNGAPAFSPDGS 260 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE-ecCCCccCceeECCCCC
Confidence 4689999986544 56677788899999999999999987654 4699999988754322 21223344789999999
Q ss_pred EEEEEE-CCCeEEE--EECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 114 YLCSGS-LDSFIKL--WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 114 ~Lasgs-~DG~I~I--WDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.|+.++ .+|.+.| ||+.++. ...+..+...+.+..|+|||+.|+.++ .+|...+ |++.....
T Consensus 261 ~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I-------------~~~~~~~~ 326 (429)
T PRK01742 261 RLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQV-------------YRMSASGG 326 (429)
T ss_pred EEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceE-------------EEEECCCC
Confidence 888764 6776555 5666554 455566667788999999999877655 5677777 76542211
Q ss_pred CCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCC
Q psy467 190 LGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSG 269 (845)
Q Consensus 190 l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~ 269 (845)
. ...+ .+. . .
T Consensus 327 ~-------------------~~~l-~~~-~-----------------------------------~-------------- 336 (429)
T PRK01742 327 G-------------------ASLV-GGR-G-----------------------------------Y-------------- 336 (429)
T ss_pred C-------------------eEEe-cCC-C-----------------------------------C--------------
Confidence 0 0000 000 0 1
Q ss_pred cccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEE
Q psy467 270 TCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348 (845)
Q Consensus 270 ~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IW 348 (845)
..+|+|||+ .++..+.++ +.+||+.+++.......+ ...++.|+|||++|++++.++ +.+|
T Consensus 337 ----------~~~~SpDG~-----~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l 398 (429)
T PRK01742 337 ----------SAQISADGK-----TLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVL 398 (429)
T ss_pred ----------CccCCCCCC-----EEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEE
Confidence 123455555 777776655 566999988765333322 345688999999999999888 7777
Q ss_pred Eec--CCceEEEecCCCCCeEEEEEc
Q psy467 349 GWE--PARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 349 Dl~--tgk~l~tl~~h~~~VtsVafS 372 (845)
.+. +|+....+..|.+.+..++|+
T Consensus 399 ~~~~~~G~~~~~l~~~~g~~~~p~ws 424 (429)
T PRK01742 399 QLVSADGRFKARLPGSDGQVKFPAWS 424 (429)
T ss_pred EEEECCCCceEEccCCCCCCCCcccC
Confidence 753 578888898888889999998
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=161.38 Aligned_cols=266 Identities=16% Similarity=0.194 Sum_probs=195.9
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR 139 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~ 139 (845)
.|..++|-|||..|+.+. +..+.+||...|.++.++++|+..|.|++|+.||+.+++|+.|..|.+|.-.- +-+-.+
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl-EG~LkY- 90 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL-EGILKY- 90 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccc-cceeee-
Confidence 799999999999988874 66899999999999999999999999999999999999999999999998653 223334
Q ss_pred CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCC
Q psy467 140 GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPG 219 (845)
Q Consensus 140 ~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~ 219 (845)
.|...|.||.|.|-...|++++-. ..-+ |...............+.+.+|..||.+++. ++..+
T Consensus 91 SH~D~IQCMsFNP~~h~LasCsLs-dFgl-------------WS~~qK~V~K~kss~R~~~CsWtnDGqylal--G~~nG 154 (1081)
T KOG1538|consen 91 SHNDAIQCMSFNPITHQLASCSLS-DFGL-------------WSPEQKSVSKHKSSSRIICCSWTNDGQYLAL--GMFNG 154 (1081)
T ss_pred ccCCeeeEeecCchHHHhhhcchh-hccc-------------cChhhhhHHhhhhheeEEEeeecCCCcEEEE--eccCc
Confidence 388999999999998889988764 3556 8877666555555677888999999998765 33333
Q ss_pred CccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe
Q psy467 220 GTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS 299 (845)
Q Consensus 220 ~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs 299 (845)
.+.+ +.. .++. ....-.|.|. ..+|.+++|+|.......-.+++..
T Consensus 155 ----TIsi---RNk------~gEe-----------k~~I~Rpgg~----------Nspiwsi~~~p~sg~G~~di~aV~D 200 (1081)
T KOG1538|consen 155 ----TISI---RNK------NGEE-----------KVKIERPGGS----------NSPIWSICWNPSSGEGRNDILAVAD 200 (1081)
T ss_pred ----eEEe---ecC------CCCc-----------ceEEeCCCCC----------CCCceEEEecCCCCCCccceEEEEe
Confidence 1112 110 0111 0111112222 4567777777754322122788888
Q ss_pred CCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceE
Q psy467 300 ADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLW 377 (845)
Q Consensus 300 ~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lL 377 (845)
...++.+|.+. |+.+..-..-.-...|+.+.++|.++..|+.|+ +++|.- .|-.+.++.....+|+.|+.. +++.+
T Consensus 201 W~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR-~GvrLGTvg~~D~WIWtV~~~PNsQ~v 278 (1081)
T KOG1538|consen 201 WGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTR-DGVRLGTVGEQDSWIWTVQAKPNSQYV 278 (1081)
T ss_pred ccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEee-cCeEEeeccccceeEEEEEEccCCceE
Confidence 88888888876 444433222233567899999999999999999 888864 556677777777899999999 89999
Q ss_pred EEE
Q psy467 378 FRR 380 (845)
Q Consensus 378 aaS 380 (845)
+.+
T Consensus 279 ~~G 281 (1081)
T KOG1538|consen 279 VVG 281 (1081)
T ss_pred EEE
Confidence 888
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.9e-14 Score=147.23 Aligned_cols=251 Identities=20% Similarity=0.278 Sum_probs=182.4
Q ss_pred CCCeEEEEECCCCe--e-EEEecCCCCCeEEEEEcCC-CCEEEEEECC-------CcEEEEECCCC---------cEEEE
Q psy467 36 DDKKVNLWALGKSN--C-IMSLSGHSTPVESVQFGNG-EETLSAGCQS-------GSIKIWNLAVP---------TVQRT 95 (845)
Q Consensus 36 ~DG~I~IWdl~t~~--~-i~~l~~h~~~V~sLafSpd-g~~LaSgs~D-------GtV~VWDl~tg---------~~v~~ 95 (845)
.|+.|.+.+++... . -..+..|.+.|+.++-+|- ...|+++..+ ..+.||.+... +++..
T Consensus 38 ~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~ 117 (370)
T KOG1007|consen 38 EDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVAS 117 (370)
T ss_pred CcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhc
Confidence 36778877765432 2 2456678899999999994 4556665442 34789998643 23334
Q ss_pred Ec-CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-EEEEc-----CCCCCeEEEEEec--CCCEEEEEeCCCcE
Q psy467 96 LN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC-IYTYR-----GHSKSINSIRFSP--DGQWIASGGEDGVV 166 (845)
Q Consensus 96 l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~-l~~~~-----~h~~~V~sLafSP--dg~~Lasgs~DG~I 166 (845)
+. .+-+.|.|+.|.|++..+++-. |..|.+|++..+.. +..+. .+....++-+|+| ||+.+++. .|+++
T Consensus 118 Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl 195 (370)
T KOG1007|consen 118 LDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTL 195 (370)
T ss_pred CCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcE
Confidence 43 3456899999999999988876 78899999987655 33332 2456678889999 78877775 56899
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEE-ecCCCCCccceeeEeeecccccccccccchhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSF-TKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~-~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
.. ||+++.+. ...+ ..|... +
T Consensus 196 ~~-------------~D~RT~~~--------------------~~sI~dAHgq~-------v------------------ 217 (370)
T KOG1007|consen 196 QF-------------WDLRTMKK--------------------NNSIEDAHGQR-------V------------------ 217 (370)
T ss_pred EE-------------EEccchhh--------------------hcchhhhhcce-------e------------------
Confidence 99 99998776 2221 112222 2
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-CeEEEEecCCCCC
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-FSLVSTTEKNSST 324 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~~~l~tl~gh~~~ 324 (845)
..+.|+|+.. .+|++|+.||.|+|||.+. ..++.++.+|..+
T Consensus 218 ---------rdlDfNpnkq----------------------------~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHW 260 (370)
T KOG1007|consen 218 ---------RDLDFNPNKQ----------------------------HILVTCGDDGYVRIWDTRKTKFPVQELPGHSHW 260 (370)
T ss_pred ---------eeccCCCCce----------------------------EEEEEcCCCccEEEEeccCCCccccccCCCceE
Confidence 4455666554 2899999999999999975 4679999999999
Q ss_pred EEEEEEeCC-CCEEEEEeCCC-EEEEEecCC-----------------------------ceEEEecCCCCCeEEEEEc-
Q psy467 325 IRRLTFSEG-GECLLGGDTEG-LKVYGWEPA-----------------------------RQYDAQPMGWGKVQDLAVT- 372 (845)
Q Consensus 325 VtslafSpd-G~~Lasgs~DG-I~IWDl~tg-----------------------------k~l~tl~~h~~~VtsVafS- 372 (845)
|.++.|+|. .++|.+|+.|. |.+|....- ..+.++..|.+.|.+++||
T Consensus 261 vW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSs 340 (370)
T KOG1007|consen 261 VWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSS 340 (370)
T ss_pred EEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeecc
Confidence 999999994 66788999999 999875320 1345778899999999999
Q ss_pred CCceEEEEEEE
Q psy467 373 GTQLWFRRVGT 383 (845)
Q Consensus 373 dg~lLaaSVsi 383 (845)
-.-++++|++.
T Consensus 341 adPWiFASLSY 351 (370)
T KOG1007|consen 341 ADPWIFASLSY 351 (370)
T ss_pred CCCeeEEEecc
Confidence 78889888543
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=153.26 Aligned_cols=277 Identities=15% Similarity=0.296 Sum_probs=182.2
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC--CCCEEEEEECCCcEEEEECCCCcEEEEE--cCCC-CCe
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN--GEETLSAGCQSGSIKIWNLAVPTVQRTL--NGHK-SSI 103 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp--dg~~LaSgs~DGtV~VWDl~tg~~v~~l--~~h~-~~V 103 (845)
+.+|++..+|.|++||..+++.+..++++...++.++|.. ....+.+++.||+|++||+++......+ ..+. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 5689999999999999999999999999999999999987 4678899999999999999987655544 3344 456
Q ss_pred EEEEEccCCCEEEEEE----CCCeEEEEECCCCce-EEEE-cCCCCCeEEEEEec-CCCEEEEEeCCCcEEEeeeeccCC
Q psy467 104 TSVDFHPYGDYLCSGS----LDSFIKLWDLRRKGC-IYTY-RGHSKSINSIRFSP-DGQWIASGGEDGVVRIGASFHLTN 176 (845)
Q Consensus 104 ~~lafspdg~~Lasgs----~DG~I~IWDl~t~~~-l~~~-~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~ 176 (845)
.|++....++.+++|+ .+-.|.+||++..+. +..+ ..|...|++++|+| +.+.|++|+.||.|.+
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnl-------- 192 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNL-------- 192 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEe--------
Confidence 7777776777888875 456799999998766 5554 46999999999999 5789999999999999
Q ss_pred ceeEEEECCCCccC----CCCC-CCCCcceeecCCC-CeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhcc
Q psy467 177 TSIHVVDLSLVHPL----GTPP-PQYTSSVPFSHNT-SLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250 (845)
Q Consensus 177 ~~I~vWDl~tg~~l----~~~~-~~~i~svs~spdg-~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~ 250 (845)
||+.....- ..+. ...+..+.|..++ +.+.++. |... +.+|.+....................
T Consensus 193 -----fD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clT-H~Et-----f~~~ele~~~~~~~~~~~~~~~~d~r 261 (376)
T KOG1188|consen 193 -----FDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLT-HMET-----FAIYELEDGSEETWLENPDVSADDLR 261 (376)
T ss_pred -----eecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEE-ccCc-----eeEEEccCCChhhcccCccchhhhHH
Confidence 998765331 1111 3346677777776 1233332 2221 22443332221111110000000000
Q ss_pred C--CCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC-CCeEEEEECC---C---CeEEEEecC-
Q psy467 251 N--PCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA-DRTVNFWDLE---K---FSLVSTTEK- 320 (845)
Q Consensus 251 ~--~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~-DG~I~IWDl~---s---~~~l~tl~g- 320 (845)
. .+.+.+. +.+|.+.. .++.++. -|...++-+. + .+.+..+.+
T Consensus 262 ~~~~~dY~I~-----------------------~~~~~~~~----~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~ 314 (376)
T KOG1188|consen 262 KEDNCDYVIN-----------------------EHSPGDKD----TCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGG 314 (376)
T ss_pred hhhhhhheee-----------------------cccCCCcc----eEEEeccccCceeEEEeeecccccccCccccccCC
Confidence 0 0001111 01122211 3444333 4555555433 2 344556665
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
|...|+++.|...+.++.+|++|| +.+|..+
T Consensus 315 ~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 315 HEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred cHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence 667889999999999999999999 9999863
|
|
| >PF13925 Katanin_con80: con80 domain of Katanin | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.4e-16 Score=153.82 Aligned_cols=97 Identities=27% Similarity=0.480 Sum_probs=92.3
Q ss_pred hhchHHHHHHHHHhhhhHHHHHHHHhcCChhHHHHHHHhcCCceeeeehhhhhc-----------------c--------
Q psy467 453 FNGHDKMMAVLRNRQRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDLFKSML-----------------G-------- 507 (845)
Q Consensus 453 ~~~h~~~~~~l~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~-------- 507 (845)
+++|++|+.+|.+|...|+.|+..|.++|++.+|++++.|+|.+|++|+++++. |
T Consensus 1 ~~~H~~~~~vL~~R~~~L~~v~~~W~~~~~k~ai~~~~~~~D~svlvD~L~vl~~~~~~~~~tLd~c~~lLP~i~~LL~S 80 (164)
T PF13925_consen 1 SKGHDTMISVLQSRLTNLQVVRTFWRRNDIKGAIEYAVRMNDPSVLVDVLSVLNQSLKPEKWTLDLCVDLLPLIEELLQS 80 (164)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcCCchHHHHHHHHHHHhcCcCcccHHHHHHHHHHHHHHHhC
Confidence 479999999999999999999999999999999999999999999999999833 2
Q ss_pred ------------------------------------------chhhhHHHHHhhhhhhHHHhhcccccccchhhHHHHHH
Q psy467 508 ------------------------------------------QGYKKCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDLL 545 (845)
Q Consensus 508 ------------------------------------------~~~~kc~~c~~~l~~~~~~~~~~~~~~g~~g~~~r~~~ 545 (845)
||++||..||.+|+.|..++..++.++|++|+.||||+
T Consensus 81 k~E~~i~~aL~~L~~i~~~f~~~I~~~~~~~~~~~gVDl~~EeR~~kc~~c~~~L~~i~~~l~~l~~~~g~~g~~a~el~ 160 (164)
T PF13925_consen 81 KYESYISVALEMLRSILKKFGPVIRSNLSAPSPSIGVDLSAEERMEKCQECYQQLRKIVQILKSLARRSGEVGSLARELN 160 (164)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 89999999999999999999999999999999999999
Q ss_pred HHHh
Q psy467 546 AEIE 549 (845)
Q Consensus 546 ~~~~ 549 (845)
++++
T Consensus 161 ~~l~ 164 (164)
T PF13925_consen 161 LELQ 164 (164)
T ss_pred HhcC
Confidence 9874
|
|
| >PF13925 Katanin_con80: con80 domain of Katanin | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-16 Score=156.44 Aligned_cols=67 Identities=51% Similarity=0.885 Sum_probs=64.8
Q ss_pred CCCceeehhhhHhHHHHHHHhhhcccchhHHHHHHHHHHHHHhhchhhhcccccCCCeeeeecccCC
Q psy467 779 EPDNVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDISKEE 845 (845)
Q Consensus 779 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~e~ 845 (845)
+|++.||||+|..+||+|+.||+||||+|+.+||++|+.|+++||++|+++++++++++|||++|||
T Consensus 57 ~~~~~~tLd~c~~lLP~i~~LL~Sk~E~~i~~aL~~L~~i~~~f~~~I~~~~~~~~~~~gVDl~~Ee 123 (164)
T PF13925_consen 57 LKPEKWTLDLCVDLLPLIEELLQSKYESYISVALEMLRSILKKFGPVIRSNLSAPSPSIGVDLSAEE 123 (164)
T ss_pred cCcCcccHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchHH
Confidence 7889999999999999999999999999999999999999999999999999987788999999997
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.7e-13 Score=146.13 Aligned_cols=247 Identities=11% Similarity=0.160 Sum_probs=160.3
Q ss_pred CCCcEEEEEEecCCCCEEEEEe-CCCeEEEEECC-CCee--EEEecCCCCCeEEEEEcCCCCEEEEEEC-CCcEEEEECC
Q psy467 14 HGASVNCLALGKKSGQVLATGG-DDKKVNLWALG-KSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQ-SGSIKIWNLA 88 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs-~DG~I~IWdl~-t~~~--i~~l~~h~~~V~sLafSpdg~~LaSgs~-DGtV~VWDl~ 88 (845)
+.+....++++| ++++|++++ .++.|.+|++. ++.. +.... .......++|+|++++|++++. ++.|.+|+++
T Consensus 33 ~~~~~~~l~~sp-d~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~ 110 (330)
T PRK11028 33 VPGQVQPMVISP-DKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLD 110 (330)
T ss_pred cCCCCccEEECC-CCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEEC
Confidence 446688899999 888887664 57889999986 3332 22222 3345678999999999888765 8899999997
Q ss_pred CC----cEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEE-----Ec-CCCCCeEEEEEecCCCEE
Q psy467 89 VP----TVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYT-----YR-GHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 89 tg----~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~-----~~-~h~~~V~sLafSPdg~~L 157 (845)
+. +.+..+. +.....+++++|+++++++++ .++.|.+||+.+...+.. .. ........++|+|+|+++
T Consensus 111 ~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~l 189 (330)
T PRK11028 111 KDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYA 189 (330)
T ss_pred CCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEE
Confidence 43 2233333 233467789999999886655 568999999976432211 11 123456789999999999
Q ss_pred EEEeC-CCcEEEeeeeccCCceeEEEECCCCc-cCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 158 ASGGE-DGVVRIGASFHLTNTSIHVVDLSLVH-PLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 158 asgs~-DG~I~I~~~~~~~~~~I~vWDl~tg~-~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
+++.. ++.|.+ ||+.... .+ ..+..+..
T Consensus 190 yv~~~~~~~v~v-------------~~~~~~~~~~-----------------~~~~~~~~-------------------- 219 (330)
T PRK11028 190 YCVNELNSSVDV-------------WQLKDPHGEI-----------------ECVQTLDM-------------------- 219 (330)
T ss_pred EEEecCCCEEEE-------------EEEeCCCCCE-----------------EEEEEEec--------------------
Confidence 88876 889999 9886321 10 00111100
Q ss_pred ccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCe-
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFS- 313 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~- 313 (845)
.|... ........++++|+++ +++++. .++.|.+|++....
T Consensus 220 ------------------------~p~~~--------~~~~~~~~i~~~pdg~-----~lyv~~~~~~~I~v~~i~~~~~ 262 (330)
T PRK11028 220 ------------------------MPADF--------SDTRWAADIHITPDGR-----HLYACDRTASLISVFSVSEDGS 262 (330)
T ss_pred ------------------------CCCcC--------CCCccceeEEECCCCC-----EEEEecCCCCeEEEEEEeCCCC
Confidence 01000 0000122455666666 666664 47899999986432
Q ss_pred ---EEEEecCCCCCEEEEEEeCCCCEEEEEeC-CC-EEEEEec
Q psy467 314 ---LVSTTEKNSSTIRRLTFSEGGECLLGGDT-EG-LKVYGWE 351 (845)
Q Consensus 314 ---~l~tl~gh~~~VtslafSpdG~~Lasgs~-DG-I~IWDl~ 351 (845)
.+..+.. ......+.|+|||++|+++.. ++ |.+|+++
T Consensus 263 ~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 263 VLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred eEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 2222222 124568999999999998876 55 9999885
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.8e-13 Score=138.39 Aligned_cols=228 Identities=21% Similarity=0.262 Sum_probs=175.4
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCC----------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEEC
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAV----------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~t----------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl 129 (845)
.|..-+|+|.+++|++|..+|+|.+..+.+ ...+...++|.++|..++|+ ..+|++|+ ||.|+-|..
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W 88 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEW 88 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeee
Confidence 355668999999999999999999998853 13445568899999999998 44666666 599999987
Q ss_pred CCCce------EEEEc-------CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCC
Q psy467 130 RRKGC------IYTYR-------GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQ 196 (845)
Q Consensus 130 ~t~~~------l~~~~-------~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~ 196 (845)
+.... +...+ ..-..|++|-..|..+-++.++.|+.++- ||+++|+.
T Consensus 89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~-------------~dlE~G~i------- 148 (325)
T KOG0649|consen 89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQ-------------VDLEDGRI------- 148 (325)
T ss_pred hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEE-------------EEecCCEE-------
Confidence 53221 11111 11236889999998888888889999999 99999988
Q ss_pred CCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccccccc
Q psy467 197 YTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSV 276 (845)
Q Consensus 197 ~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~ 276 (845)
...+.+|.+. + .++.-.....
T Consensus 149 -------------~r~~rGHtDY-------v---------------------------H~vv~R~~~~------------ 169 (325)
T KOG0649|consen 149 -------------QREYRGHTDY-------V---------------------------HSVVGRNANG------------ 169 (325)
T ss_pred -------------EEEEcCCcce-------e---------------------------eeeeecccCc------------
Confidence 8889999888 6 4554422222
Q ss_pred CceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC----------CCCEEEEEEeCCCCEEEEEeCCCEE
Q psy467 277 SRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN----------SSTIRRLTFSEGGECLLGGDTEGLK 346 (845)
Q Consensus 277 ~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh----------~~~VtslafSpdG~~Lasgs~DGI~ 346 (845)
.+.+|+.||++++||.++++++..+... ..+|-+++.+ ..+|++|+.-.+.
T Consensus 170 -----------------qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~--edWlvCGgGp~ls 230 (325)
T KOG0649|consen 170 -----------------QILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN--EDWLVCGGGPKLS 230 (325)
T ss_pred -----------------ceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc--CceEEecCCCcee
Confidence 5889999999999999999998887632 2356666665 4599998877799
Q ss_pred EEEecCCceEEEecCCCCCeEEEEEcCCceEEEE----EEEEeeCCC
Q psy467 347 VYGWEPARQYDAQPMGWGKVQDLAVTGTQLWFRR----VGTWSHQDS 389 (845)
Q Consensus 347 IWDl~tgk~l~tl~~h~~~VtsVafSdg~lLaaS----VsiW~~d~~ 389 (845)
+|.+...++..++. -...+..+.|-+...++++ |..|...+.
T Consensus 231 lwhLrsse~t~vfp-ipa~v~~v~F~~d~vl~~G~g~~v~~~~l~Gv 276 (325)
T KOG0649|consen 231 LWHLRSSESTCVFP-IPARVHLVDFVDDCVLIGGEGNHVQSYTLNGV 276 (325)
T ss_pred EEeccCCCceEEEe-cccceeEeeeecceEEEeccccceeeeeeccE
Confidence 99999988887775 4577888999988888887 888987655
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.1e-13 Score=141.06 Aligned_cols=267 Identities=15% Similarity=0.238 Sum_probs=190.0
Q ss_pred cEEEEEEec--CCCCEEEEEeC----CCeEEEEEC--CCCeeEEEe-cCCCCCeEEEEEcCCC-----CEEEEEECCCcE
Q psy467 17 SVNCLALGK--KSGQVLATGGD----DKKVNLWAL--GKSNCIMSL-SGHSTPVESVQFGNGE-----ETLSAGCQSGSI 82 (845)
Q Consensus 17 ~V~~LafSp--~dg~~LaTgs~----DG~I~IWdl--~t~~~i~~l-~~h~~~V~sLafSpdg-----~~LaSgs~DGtV 82 (845)
.+.++.|+. +.+.+||.|+. .+.|.|-.+ ++++.+..- ..|..+++.+.|.|+. ++||+. +..+
T Consensus 46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs--~D~L 123 (364)
T KOG0290|consen 46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATS--SDFL 123 (364)
T ss_pred ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcc--cCeE
Confidence 588899983 34678998873 456777655 344443322 3588999999999976 346655 4579
Q ss_pred EEEECCC--CcEE--EEE-----cCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCc---eEEEEcCCCCCeEEEE
Q psy467 83 KIWNLAV--PTVQ--RTL-----NGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKG---CIYTYRGHSKSINSIR 149 (845)
Q Consensus 83 ~VWDl~t--g~~v--~~l-----~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~---~l~~~~~h~~~V~sLa 149 (845)
++|.+.. .+.. ..+ ..+..++++..|+. +-+++.+++-|-+..|||++++. ....+-+|...|..++
T Consensus 124 RlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIa 203 (364)
T KOG0290|consen 124 RLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIA 203 (364)
T ss_pred EEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEE
Confidence 9999874 2211 111 23567899999987 55789999999999999998863 4566778999999999
Q ss_pred EecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC--CCCccceee
Q psy467 150 FSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR--PGGTKAKID 226 (845)
Q Consensus 150 fSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~--~~~~~~~i~ 226 (845)
|...+ +.||+++.||.+++ ||++...... +. +.... ..
T Consensus 204 f~~~s~~~FASvgaDGSvRm-------------FDLR~leHST------------------II-YE~p~~~~p------- 244 (364)
T KOG0290|consen 204 FLKGSRDVFASVGADGSVRM-------------FDLRSLEHST------------------II-YEDPSPSTP------- 244 (364)
T ss_pred eccCccceEEEecCCCcEEE-------------EEecccccce------------------EE-ecCCCCCCc-------
Confidence 99854 57999999999999 9998655410 00 00000 00
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC-CeEE
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD-RTVN 305 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D-G~I~ 305 (845)
+ ..++|++... +++|+-..| ..|.
T Consensus 245 L---------------------------lRLswnkqDp----------------------------nymATf~~dS~~V~ 269 (364)
T KOG0290|consen 245 L---------------------------LRLSWNKQDP----------------------------NYMATFAMDSNKVV 269 (364)
T ss_pred c---------------------------eeeccCcCCc----------------------------hHHhhhhcCCceEE
Confidence 1 3344444332 166665554 5799
Q ss_pred EEECCC-CeEEEEecCCCCCEEEEEEeCC-CCEEEEEeCCC-EEEEEecCCc------eEEEecCCCCCeEEEEEc--CC
Q psy467 306 FWDLEK-FSLVSTTEKNSSTIRRLTFSEG-GECLLGGDTEG-LKVYGWEPAR------QYDAQPMGWGKVQDLAVT--GT 374 (845)
Q Consensus 306 IWDl~s-~~~l~tl~gh~~~VtslafSpd-G~~Lasgs~DG-I~IWDl~tgk------~l~tl~~h~~~VtsVafS--dg 374 (845)
|.|++. ..++.++++|.+.|+.++|.|. ...|+++++|. +.+||++.-- .+-.+. -.+.|+.+.|+ .+
T Consensus 270 iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~ 348 (364)
T KOG0290|consen 270 ILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQP 348 (364)
T ss_pred EEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCC
Confidence 999986 5678999999999999999995 66889999999 9999997631 112222 45789999999 77
Q ss_pred ceEEEE
Q psy467 375 QLWFRR 380 (845)
Q Consensus 375 ~lLaaS 380 (845)
.+|++.
T Consensus 349 Dwiai~ 354 (364)
T KOG0290|consen 349 DWIAIC 354 (364)
T ss_pred CEEEEE
Confidence 788765
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-14 Score=160.65 Aligned_cols=160 Identities=25% Similarity=0.471 Sum_probs=133.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEe-cCCCCCeEEEEEcC--CCCEEEEEECCCcEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFGN--GEETLSAGCQSGSIKI 84 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l-~~h~~~V~sLafSp--dg~~LaSgs~DGtV~V 84 (845)
-++|.||++-|+|+.|+. +|.+|++|+.|-.+.|||.-..+.++.+ .+|...|.++.|-| +...+++|..|..|++
T Consensus 43 E~eL~GH~GCVN~LeWn~-dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNA-DGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhccccceecceeecC-CCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence 467999999999999999 9999999999999999999888887776 68999999999998 5568899999999999
Q ss_pred EECCC----------CcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCce-------E---EEEcCCCC
Q psy467 85 WNLAV----------PTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGC-------I---YTYRGHSK 143 (845)
Q Consensus 85 WDl~t----------g~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~-------l---~~~~~h~~ 143 (845)
+|+.. ......+..|...|..|+..|++ +.|.++++||+|+-+|++.... . ..+...--
T Consensus 122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li 201 (758)
T KOG1310|consen 122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI 201 (758)
T ss_pred EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence 99984 13345556788899999999998 7899999999999999986321 1 11112223
Q ss_pred CeEEEEEecC-CCEEEEEeCCCcEEE
Q psy467 144 SINSIRFSPD-GQWIASGGEDGVVRI 168 (845)
Q Consensus 144 ~V~sLafSPd-g~~Lasgs~DG~I~I 168 (845)
...|+..+|. ..+|++|+.|-..++
T Consensus 202 elk~ltisp~rp~~laVGgsdpfarL 227 (758)
T KOG1310|consen 202 ELKCLTISPSRPYYLAVGGSDPFARL 227 (758)
T ss_pred eeeeeeecCCCCceEEecCCCchhhh
Confidence 5678999994 567999999999999
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-13 Score=159.96 Aligned_cols=244 Identities=21% Similarity=0.258 Sum_probs=176.7
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EE----EecCCCCCeEEEEEcCCC--CEEEEEECCCcEEEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IM----SLSGHSTPVESVQFGNGE--ETLSAGCQSGSIKIW 85 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~----~l~~h~~~V~sLafSpdg--~~LaSgs~DGtV~VW 85 (845)
-...|+|++|+|.+..++|.|..+|.|.+||+..+.. .. ....|..+|..+.|..+. .-+++++.||.|..|
T Consensus 241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W 320 (555)
T KOG1587|consen 241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW 320 (555)
T ss_pred cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence 3568999999999999999999999999999976654 22 224589999999997654 449999999999999
Q ss_pred ECCCCcE-EE-----EEc------CCCCCeEEEEEccCC-CEEEEEECCCeEEEEEC---CCC-----ceEEEEcCCCCC
Q psy467 86 NLAVPTV-QR-----TLN------GHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDL---RRK-----GCIYTYRGHSKS 144 (845)
Q Consensus 86 Dl~tg~~-v~-----~l~------~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl---~t~-----~~l~~~~~h~~~ 144 (845)
+++.-.. .. ... .....+++++|.+.. ..|++|+.+|.|..-+- ... +....+..|.+.
T Consensus 321 ~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~ 400 (555)
T KOG1587|consen 321 DTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGP 400 (555)
T ss_pred eccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcc
Confidence 8864322 11 111 122458899999854 67899999999877332 221 123355668899
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECC-CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccc
Q psy467 145 INSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLS-LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKA 223 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~-tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~ 223 (845)
|.++.++|=+..++..+.|.++++ |... ...+ +..+..+...
T Consensus 401 v~~v~~nPF~~k~fls~gDW~vri-------------Ws~~~~~~P--------------------l~~~~~~~~~---- 443 (555)
T KOG1587|consen 401 VYAVSRNPFYPKNFLSVGDWTVRI-------------WSEDVIASP--------------------LLSLDSSPDY---- 443 (555)
T ss_pred eEeeecCCCccceeeeeccceeEe-------------ccccCCCCc--------------------chhhhhccce----
Confidence 999999996655444444999999 9876 3333 2222222222
Q ss_pred eeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCe
Q psy467 224 KIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT 303 (845)
Q Consensus 224 ~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~ 303 (845)
+ +.++|||... .+++++..||.
T Consensus 444 ---v---------------------------~~vaWSptrp----------------------------avF~~~d~~G~ 465 (555)
T KOG1587|consen 444 ---V---------------------------TDVAWSPTRP----------------------------AVFATVDGDGN 465 (555)
T ss_pred ---e---------------------------eeeEEcCcCc----------------------------eEEEEEcCCCc
Confidence 3 5566666554 28899999999
Q ss_pred EEEEECCCC--eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 304 VNFWDLEKF--SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 304 I~IWDl~s~--~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
|.+||+... .++.+...+....+.+.|++.|+.|++|+..| +++|++..
T Consensus 466 l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 466 LDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred eehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 999998653 45555555566778889999999999999999 99999864
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.7e-14 Score=154.58 Aligned_cols=254 Identities=18% Similarity=0.229 Sum_probs=179.4
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEE-c-------CCCCEEEEEECCCcEEE
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-G-------NGEETLSAGCQSGSIKI 84 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLaf-S-------pdg~~LaSgs~DGtV~V 84 (845)
-|...|.|+.|+. +...+.++ .|..+.+|.-.+......+.-...-|....+ - .....|+.++.||.+.+
T Consensus 12 r~~e~vc~v~w~~-~eei~~~~-dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~i 89 (737)
T KOG1524|consen 12 RNSEKVCCVDWSS-NEEIYFVS-DDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVI 89 (737)
T ss_pred ccceeEEeecccc-cceEEEec-cCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEE
Confidence 5778889999987 66655555 4556666654333322222211111111111 0 12356888889999999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
.+- .++....+..|.+.+.+-.|+|||.-|+++++||.|++|.- +|-...++.....+|.|++|.|+.+-++-+- .+
T Consensus 90 l~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~-g~ 166 (737)
T KOG1524|consen 90 LNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQ-GG 166 (737)
T ss_pred ecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEec-CC
Confidence 875 47777888999999999999999999999999999999984 4544445555677899999999877655543 35
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
.+.+ -.+..... +..+..|.+- |
T Consensus 167 h~~I-------------KpL~~n~k--------------------~i~WkAHDGi-------i----------------- 189 (737)
T KOG1524|consen 167 HISI-------------KPLAANSK--------------------IIRWRAHDGL-------V----------------- 189 (737)
T ss_pred eEEE-------------eecccccc--------------------eeEEeccCcE-------E-----------------
Confidence 6666 22222222 4445666665 5
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~ 324 (845)
.++.|++... ++++|+.|-..++||.. |..+.+-..|..+
T Consensus 190 ----------L~~~W~~~s~-----------------------------lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ 229 (737)
T KOG1524|consen 190 ----------LSLSWSTQSN-----------------------------IIASGGEDFRFKIWDAQ-GANLFTSAAEEYA 229 (737)
T ss_pred ----------EEeecCcccc-----------------------------ceeecCCceeEEeeccc-CcccccCChhccc
Confidence 6666666666 99999999999999966 6777777889999
Q ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 325 IRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 325 VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
|++++|.|+ +..+.++.+.+++ -+...+.|..++|| ||.-++++
T Consensus 230 ITSva~npd-~~~~v~S~nt~R~-----------~~p~~GSifnlsWS~DGTQ~a~g 274 (737)
T KOG1524|consen 230 ITSVAFNPE-KDYLLWSYNTARF-----------SSPRVGSIFNLSWSADGTQATCG 274 (737)
T ss_pred eeeeeeccc-cceeeeeeeeeee-----------cCCCccceEEEEEcCCCceeecc
Confidence 999999999 6677777665441 12356789999999 99888877
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.7e-13 Score=158.82 Aligned_cols=294 Identities=19% Similarity=0.242 Sum_probs=203.8
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCC---CCCeEEEEEcC--CCCEEEEEEC
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGH---STPVESVQFGN--GEETLSAGCQ 78 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h---~~~V~sLafSp--dg~~LaSgs~ 78 (845)
..|..+...+....-..+.|+| -...++++.+.-.|+|||.+.++.+..+..+ ...|+.+.+-. |..++++|+.
T Consensus 1053 ~~W~~~~~~~n~~~pk~~~~hp-f~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~ 1131 (1387)
T KOG1517|consen 1053 GNWDQKFMTGNNQPPKTLKFHP-FEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASS 1131 (1387)
T ss_pred cchHHHHHhcCCCCCceeeecC-CCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeecc
Confidence 4566666677777788899999 7888998887779999999999988777644 45788888865 5568999999
Q ss_pred CCcEEEEECC-----CCcEEEEEcCC-------CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-CCCCe
Q psy467 79 SGSIKIWNLA-----VPTVQRTLNGH-------KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKSI 145 (845)
Q Consensus 79 DGtV~VWDl~-----tg~~v~~l~~h-------~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~~~V 145 (845)
||.|+||+-- ..+.+..+.+- .+.-.-++|.....+|++++.-..|+|||.....++..+.. ....|
T Consensus 1132 dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~v 1211 (1387)
T KOG1517|consen 1132 DGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLV 1211 (1387)
T ss_pred CceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccc
Confidence 9999999642 23444433221 11224567888777788777788999999987777666543 34456
Q ss_pred EEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 146 NSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
+++.-+- .|+.+++|..||.+++ ||.+.... ...+.....|.....
T Consensus 1212 TaLS~~~~~gn~i~AGfaDGsvRv-------------yD~R~a~~-----------------ds~v~~~R~h~~~~~--- 1258 (1387)
T KOG1517|consen 1212 TALSADLVHGNIIAAGFADGSVRV-------------YDRRMAPP-----------------DSLVCVYREHNDVEP--- 1258 (1387)
T ss_pred eeecccccCCceEEEeecCCceEE-------------eecccCCc-----------------cccceeecccCCccc---
Confidence 6665443 4799999999999999 99885443 011333333332200
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
| ..+.+.+.|. ..|++|+.||.|
T Consensus 1259 --I---------------------------v~~slq~~G~----------------------------~elvSgs~~G~I 1281 (1387)
T KOG1517|consen 1259 --I---------------------------VHLSLQRQGL----------------------------GELVSGSQDGDI 1281 (1387)
T ss_pred --c---------------------------eeEEeecCCC----------------------------cceeeeccCCeE
Confidence 1 3344444443 159999999999
Q ss_pred EEEECCCCeEE--EEecCC---CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCC-------CCCeEEEEE
Q psy467 305 NFWDLEKFSLV--STTEKN---SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMG-------WGKVQDLAV 371 (845)
Q Consensus 305 ~IWDl~s~~~l--~tl~gh---~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h-------~~~VtsVaf 371 (845)
++||++..... .++..| .+..+++..+++...+|+|+. + |+||++.. +.+..++.+ .+.+.+++|
T Consensus 1282 ~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G-~~l~~~k~n~~F~~q~~gs~scL~F 1359 (1387)
T KOG1517|consen 1282 QLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSG-EQLNIIKYNPGFMGQRIGSVSCLAF 1359 (1387)
T ss_pred EEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecCh-hhhcccccCcccccCcCCCcceeee
Confidence 99999874222 222233 235999999999999999999 6 99999865 334333322 356899999
Q ss_pred cC-CceEEEE-----EEEEeeCCCC
Q psy467 372 TG-TQLWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 372 Sd-g~lLaaS-----VsiW~~d~~~ 390 (845)
++ .-++|++ |+++......
T Consensus 1360 HP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1360 HPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred cchhHhhhhccCCceEEEeecCCcC
Confidence 94 4455555 8888766543
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.5e-15 Score=161.25 Aligned_cols=227 Identities=12% Similarity=0.214 Sum_probs=190.7
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~ 137 (845)
...-..+.++.+|.+|+.|+..|.|..+|+.++++...+.. ...|.++.|..+.++||++- ...++|||- .|..++.
T Consensus 129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~-~GtElHC 205 (545)
T KOG1272|consen 129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHNEQFFAVAQ-KKYVYVYDN-NGTELHC 205 (545)
T ss_pred ccCCeeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcchHHHHhhh-hceEEEecC-CCcEEee
Confidence 44567889999999999999999999999999999988874 45689999999888887765 567999995 5788888
Q ss_pred EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC
Q psy467 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 138 ~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~ 217 (845)
++.+ ..|..+.|-|..-+|++++..|.+.- -|+.+|+. ++.+....
T Consensus 206 lk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y-------------~DVS~Gkl--------------------Va~~~t~~ 251 (545)
T KOG1272|consen 206 LKRH-IRVARLEFLPYHFLLVAASEAGFLKY-------------QDVSTGKL--------------------VASIRTGA 251 (545)
T ss_pred hhhc-CchhhhcccchhheeeecccCCceEE-------------Eeechhhh--------------------hHHHHccC
Confidence 8754 46899999998888999999999998 99999998 44443333
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS 297 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat 297 (845)
+. + ..+.-+|... .+.+
T Consensus 252 G~-------~---------------------------~vm~qNP~Na-----------------------------Vih~ 268 (545)
T KOG1272|consen 252 GR-------T---------------------------DVMKQNPYNA-----------------------------VIHL 268 (545)
T ss_pred Cc-------c---------------------------chhhcCCccc-----------------------------eEEE
Confidence 33 2 3345555555 8999
Q ss_pred EeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEcCCce
Q psy467 298 SSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVTGTQL 376 (845)
Q Consensus 298 gs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafSdg~l 376 (845)
|...|+|.+|.....+++..+..|.++|.++++.++|+|+||++.|. ++|||+..-..+.++.. ......+++|+..+
T Consensus 269 GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkgl 347 (545)
T KOG1272|consen 269 GHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKGL 347 (545)
T ss_pred cCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCccccccccccc
Confidence 99999999999999999999999999999999999999999999999 99999998777666655 56788999998888
Q ss_pred EEEE----EEEEe
Q psy467 377 WFRR----VGTWS 385 (845)
Q Consensus 377 LaaS----VsiW~ 385 (845)
||++ |.+|.
T Consensus 348 LA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 348 LALSYGDHVQIWK 360 (545)
T ss_pred eeeecCCeeeeeh
Confidence 8888 99994
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-14 Score=156.92 Aligned_cols=294 Identities=19% Similarity=0.271 Sum_probs=215.6
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEe-cCCCCCeEEEEEcC--CCCEEEEEECCCcEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFGN--GEETLSAGCQSGSIKI 84 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l-~~h~~~V~sLafSp--dg~~LaSgs~DGtV~V 84 (845)
.+.|.+|.+.|+.+.|+. .|+.|++|+.|..|.+||+..+.....+ .+|...|....|-| +...+++++.||.|++
T Consensus 135 ~~kL~~H~GcVntV~FN~-~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~ 213 (559)
T KOG1334|consen 135 QKKLNKHKGCVNTVHFNQ-RGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV 213 (559)
T ss_pred hhcccCCCCccceeeecc-cCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence 357889999999999998 9999999999999999999988877666 57988998888988 4567999999999999
Q ss_pred EECCCCcE---EEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEE---cCCCC---CeEEEEEecCC
Q psy467 85 WNLAVPTV---QRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTY---RGHSK---SINSIRFSPDG 154 (845)
Q Consensus 85 WDl~tg~~---v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~---~~h~~---~V~sLafSPdg 154 (845)
=.+..... ...+..|.++|.-++.-|+. ..|.+++.|+.+.-+|++++.....+ ..+.. ....++..|..
T Consensus 214 s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~n 293 (559)
T KOG1334|consen 214 SEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRN 293 (559)
T ss_pred eeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCC
Confidence 87754332 24556799999999999976 56899999999999999877554333 22333 56788888854
Q ss_pred -CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccc
Q psy467 155 -QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEEN 233 (845)
Q Consensus 155 -~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~ 233 (845)
..+++++.|..+++ ||.+....- .....+..+..+...
T Consensus 294 t~~faVgG~dqf~Rv-------------YD~R~~~~e--------------~~n~~~~~f~p~hl~-------------- 332 (559)
T KOG1334|consen 294 TNEFAVGGSDQFARV-------------YDQRRIDKE--------------ENNGVLDKFCPHHLV-------------- 332 (559)
T ss_pred ccccccCChhhhhhh-------------hcccchhhc--------------cccchhhhcCCcccc--------------
Confidence 47999999999999 987754330 000001111111100
Q ss_pred ccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC--
Q psy467 234 AESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-- 311 (845)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-- 311 (845)
......|++++|+.++. -|.+.-.|-.|++|.-.-
T Consensus 333 --------------------------------------~d~~v~ITgl~Ysh~~s-----ElLaSYnDe~IYLF~~~~~~ 369 (559)
T KOG1334|consen 333 --------------------------------------EDDPVNITGLVYSHDGS-----ELLASYNDEDIYLFNKSMGD 369 (559)
T ss_pred --------------------------------------ccCcccceeEEecCCcc-----ceeeeecccceEEecccccc
Confidence 01123456666665554 455666788899995322
Q ss_pred C----------eEEEE-ecCCCC--CEEEEEE-eCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCc
Q psy467 312 F----------SLVST-TEKNSS--TIRRLTF-SEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQ 375 (845)
Q Consensus 312 ~----------~~l~t-l~gh~~--~Vtslaf-SpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~ 375 (845)
| ..+.. ++||.. .|..+-| -|...|+++|++-| |.||+-.+++.+..+.+....|+|+.=+ ---
T Consensus 370 G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~P 449 (559)
T KOG1334|consen 370 GSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLP 449 (559)
T ss_pred CCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCc
Confidence 2 22333 778843 4666654 67889999999999 9999999999999888877799999988 455
Q ss_pred eEEEE-----EEEEee
Q psy467 376 LWFRR-----VGTWSH 386 (845)
Q Consensus 376 lLaaS-----VsiW~~ 386 (845)
+||+| |.||..
T Consensus 450 vLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 450 VLASSGIDHDVKIWTP 465 (559)
T ss_pred hhhccCCccceeeecC
Confidence 56655 999974
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-13 Score=156.28 Aligned_cols=219 Identities=16% Similarity=0.114 Sum_probs=153.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCC---CeEEEEECCCCee--EEEecCCCCCeEEEEEcCCCCEEEEEE-CCCc
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDD---KKVNLWALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGC-QSGS 81 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~D---G~I~IWdl~t~~~--i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGt 81 (845)
.+.+..|...|.+.+||| +|+.|+.++.+ ..|++||+.+++. +..+.+| ...++|+|||+.|+.++ .+|.
T Consensus 196 ~~~lt~~~~~v~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~ 271 (429)
T PRK01742 196 QFIVNRSSQPLMSPAWSP-DGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGV 271 (429)
T ss_pred ceEeccCCCccccceEcC-CCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCc
Confidence 356778888999999999 89988887643 4799999987754 3333333 44689999999988765 5776
Q ss_pred EEEE--ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 82 IKIW--NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 82 V~VW--Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
+.|| |+.++. ...+..+...+....|+|||+.|+.++ .+|...+|++... .....+ .+.. .+..|+|||++|
T Consensus 272 ~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~i 347 (429)
T PRK01742 272 LNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTL 347 (429)
T ss_pred EEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEE
Confidence 6555 666655 455566777788999999999877655 5778888876432 222223 3333 457899999999
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
+.++.+ .+.+ ||+.++.. .. +.... . .
T Consensus 348 a~~~~~-~i~~-------------~Dl~~g~~--------------------~~-lt~~~-~-------~---------- 374 (429)
T PRK01742 348 VMINGD-NVVK-------------QDLTSGST--------------------EV-LSSTF-L-------D---------- 374 (429)
T ss_pred EEEcCC-CEEE-------------EECCCCCe--------------------EE-ecCCC-C-------C----------
Confidence 888765 4666 88877654 11 10000 0 0
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC--CCCeEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL--EKFSLV 315 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl--~s~~~l 315 (845)
....|+|++. +|+.++.++.+.+|++ .++..+
T Consensus 375 -----------------~~~~~sPdG~-----------------------------~i~~~s~~g~~~~l~~~~~~G~~~ 408 (429)
T PRK01742 375 -----------------ESPSISPNGI-----------------------------MIIYSSTQGLGKVLQLVSADGRFK 408 (429)
T ss_pred -----------------CCceECCCCC-----------------------------EEEEEEcCCCceEEEEEECCCCce
Confidence 2233445444 8888888998888875 357788
Q ss_pred EEecCCCCCEEEEEEeCC
Q psy467 316 STTEKNSSTIRRLTFSEG 333 (845)
Q Consensus 316 ~tl~gh~~~VtslafSpd 333 (845)
..+..|.+.+...+|||-
T Consensus 409 ~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 409 ARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred EEccCCCCCCCCcccCCC
Confidence 888888888999999984
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.2e-13 Score=140.31 Aligned_cols=288 Identities=14% Similarity=0.197 Sum_probs=191.9
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC------CcEEEEEc-CCCCCeEEEEEccCCCEEEEEECCCeE
Q psy467 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV------PTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLDSFI 124 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t------g~~v~~l~-~h~~~V~~lafspdg~~Lasgs~DG~I 124 (845)
+.+.+|.++|+++.|+.++++|++|+.|..+++|+++. .+++.... .|...|.|++|.-.++++++|+.+++|
T Consensus 50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V 129 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV 129 (609)
T ss_pred hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence 34567999999999999999999999999999999864 34444443 366899999999999999999999999
Q ss_pred EEEECCCCceEEEEcC--CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc-CCCC----CCCC
Q psy467 125 KLWDLRRKGCIYTYRG--HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP-LGTP----PPQY 197 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~--h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~-l~~~----~~~~ 197 (845)
...|+++.+.+..+.. ..+.|..+..+|-.+.|++.+.++.|.+ ||.+.... .... .+..
T Consensus 130 I~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~-------------~D~Rd~~~~~~~~~~AN~~~~ 196 (609)
T KOG4227|consen 130 IKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSF-------------IDNRDRQNPISLVLPANSGKN 196 (609)
T ss_pred EeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEE-------------EeccCCCCCCceeeecCCCcc
Confidence 9999999888877752 3458999999999999999999999999 99886552 1111 1333
Q ss_pred CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccccc---
Q psy467 198 TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPV--- 274 (845)
Q Consensus 198 i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~--- 274 (845)
...+-|.|..-.+........+ .+ +|++....... + +.+.....
T Consensus 197 F~t~~F~P~~P~Li~~~~~~~G--~~---~~D~R~~~~~~--------~--------------------~~~~~~~L~~~ 243 (609)
T KOG4227|consen 197 FYTAEFHPETPALILVNSETGG--PN---VFDRRMQARPV--------Y--------------------QRSMFKGLPQE 243 (609)
T ss_pred ceeeeecCCCceeEEeccccCC--CC---ceeeccccchH--------H--------------------hhhccccCccc
Confidence 4455566555444333322222 11 22221111100 0 00000000
Q ss_pred ccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE-EEEecCCC-------CCEEEEEEeCCCCEEEEEeCCC-E
Q psy467 275 SVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL-VSTTEKNS-------STIRRLTFSEGGECLLGGDTEG-L 345 (845)
Q Consensus 275 ~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~-l~tl~gh~-------~~VtslafSpdG~~Lasgs~DG-I 345 (845)
...-.++.|+|+|+ .+++--....-.+||+.+..+ +..+. |+ ..+.+++|..|.. +++|+++= |
T Consensus 244 ~~~~M~~~~~~~G~-----Q~msiRR~~~P~~~D~~S~R~~V~k~D-~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i 316 (609)
T KOG4227|consen 244 NTEWMGSLWSPSGN-----QFMSIRRGKCPLYFDFISQRCFVLKSD-HNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGI 316 (609)
T ss_pred chhhhheeeCCCCC-----eehhhhccCCCEEeeeecccceeEecc-CCCCcceeeeeeeeeeeeccee-eeccCcccce
Confidence 11123556777776 555544444556788776443 33333 22 2577888876654 78888776 9
Q ss_pred EEEEecC----------C-------------ceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCCCCCc
Q psy467 346 KVYGWEP----------A-------------RQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDSGFS 392 (845)
Q Consensus 346 ~IWDl~t----------g-------------k~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~~~~ 392 (845)
++|.+.. | +.+..+++|.+.++.|.|+ ...+|+.+ +.+|.--..+..
T Consensus 317 ~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~~r~P~~ 392 (609)
T KOG4227|consen 317 HIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSDHRLPWS 392 (609)
T ss_pred EEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhheeccccccCCcc
Confidence 9998753 1 2346789999999999999 55555555 889975555443
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=8.5e-14 Score=150.62 Aligned_cols=199 Identities=21% Similarity=0.306 Sum_probs=149.8
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-
Q psy467 62 ESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG- 140 (845)
Q Consensus 62 ~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~- 140 (845)
.+++|+.+|..|++|+.||+++||++.+...+.....|.+.|.+++|+|||++|++.+.| ..+||+++++.++.....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 689999999999999999999999998888888888899999999999999999999999 899999999977766552
Q ss_pred -CCCCeEEEEEecCC---CE--EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe
Q psy467 141 -HSKSINSIRFSPDG---QW--IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 141 -h~~~V~sLafSPdg---~~--Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~ 214 (845)
.+..+..+.|+.|+ .+ ++.....+.|+. ||+...+.
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~-------------~~~~~w~~------------------------- 268 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRL-------------CDISLWSG------------------------- 268 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeE-------------EEeeeecc-------------------------
Confidence 33345667787765 22 222223344444 44321111
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
+ ...+..+.+.....|++++.|+||+ +
T Consensus 269 -----------------------------------------------~-~~l~~~~~~~~~~siSsl~VS~dGk-----f 295 (398)
T KOG0771|consen 269 -----------------------------------------------S-NFLRLRKKIKRFKSISSLAVSDDGK-----F 295 (398)
T ss_pred -----------------------------------------------c-cccchhhhhhccCcceeEEEcCCCc-----E
Confidence 1 1111112222234566777777777 9
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEec-CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 295 TTSSSADRTVNFWDLEKFSLVSTTE-KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~~~l~tl~-gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
++.|+.||.|.|++..+.++++-.+ .|...|+.+.|+||.+++++.+.+. ..|..+.-
T Consensus 296 ~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 296 LALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 9999999999999999988877665 6899999999999999999988887 77766543
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.4e-12 Score=145.86 Aligned_cols=233 Identities=15% Similarity=0.110 Sum_probs=153.8
Q ss_pred eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC---CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE
Q psy467 39 KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ---SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115 (845)
Q Consensus 39 ~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~---DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L 115 (845)
.|.+||.+..+. +.+..+...+.+.+|+|||+.|+..+. +..|.+|++.+++.... ....+.+..++|+|||+.|
T Consensus 180 ~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG~~L 257 (429)
T PRK03629 180 ELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKL 257 (429)
T ss_pred eEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCCCEE
Confidence 688999865543 445557778999999999999987643 45799999988764332 2233445578999999988
Q ss_pred EEE-ECCC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC-CcEEEeeeeccCCceeEEEECCCCccCC
Q psy467 116 CSG-SLDS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED-GVVRIGASFHLTNTSIHVVDLSLVHPLG 191 (845)
Q Consensus 116 asg-s~DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D-G~I~I~~~~~~~~~~I~vWDl~tg~~l~ 191 (845)
+.. +.+| .|++||+.+++... +..+...+....|+|||+.|+.++.+ +...+ +.+|+.++..
T Consensus 258 a~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~I-----------y~~d~~~g~~-- 323 (429)
T PRK03629 258 AFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQV-----------YKVNINGGAP-- 323 (429)
T ss_pred EEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceE-----------EEEECCCCCe--
Confidence 765 4444 59999998876544 44445567889999999988777653 44444 2255554432
Q ss_pred CCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcc
Q psy467 192 TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271 (845)
Q Consensus 192 ~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~ 271 (845)
..+...... . ....|
T Consensus 324 -------------------~~lt~~~~~-------~---------------------------~~~~~------------ 338 (429)
T PRK03629 324 -------------------QRITWEGSQ-------N---------------------------QDADV------------ 338 (429)
T ss_pred -------------------EEeecCCCC-------c---------------------------cCEEE------------
Confidence 111100000 0 22344
Q ss_pred cccccCceeEEEcCCCCcccceEEEEEeCC---CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC----
Q psy467 272 VPVSVSRTSLSILPQSPMLCFILTTSSSAD---RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG---- 344 (845)
Q Consensus 272 ~~~~~~I~slafSPdg~~~~~~lLatgs~D---G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG---- 344 (845)
+|||+ .++..+.+ ..|.+||+.+++... +... .......|+|||++|+.++.++
T Consensus 339 ------------SpDG~-----~Ia~~~~~~g~~~I~~~dl~~g~~~~-Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~ 399 (429)
T PRK03629 339 ------------SSDGK-----FMVMVSSNGGQQHIAKQDLATGGVQV-LTDT-FLDETPSIAPNGTMVIYSSSQGMGSV 399 (429)
T ss_pred ------------CCCCC-----EEEEEEccCCCceEEEEECCCCCeEE-eCCC-CCCCCceECCCCCEEEEEEcCCCceE
Confidence 44444 56554433 368899998886443 3321 2345678999999999988776
Q ss_pred EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 345 LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 345 I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
+.++++ +|+....+.+|.+.+...+|+
T Consensus 400 l~~~~~-~G~~~~~l~~~~~~~~~p~Ws 426 (429)
T PRK03629 400 LNLVST-DGRFKARLPATDGQVKFPAWS 426 (429)
T ss_pred EEEEEC-CCCCeEECccCCCCcCCcccC
Confidence 566666 456667788888889888887
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=143.97 Aligned_cols=297 Identities=10% Similarity=0.136 Sum_probs=198.2
Q ss_pred EEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE-ECCCcEEEEECCCCcEEEEEcCC
Q psy467 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG-CQSGSIKIWNLAVPTVQRTLNGH 99 (845)
Q Consensus 21 LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg-s~DGtV~VWDl~tg~~v~~l~~h 99 (845)
.+||| +|+++|+.+.- .+.|=|.++-+..+.+. .-+.|.-+.|..|..+++++ ..++.|.+|++...+-...+...
T Consensus 14 c~fSp-~g~yiAs~~~y-rlviRd~~tlq~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg 90 (447)
T KOG4497|consen 14 CSFSP-CGNYIASLSRY-RLVIRDSETLQLHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEG 90 (447)
T ss_pred eeECC-CCCeeeeeeee-EEEEeccchhhHHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccC
Confidence 57999 99999999866 78888887766554443 24568889999988876654 56889999999999988999888
Q ss_pred CCCeEEEEEccCCCEE-EEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCce
Q psy467 100 KSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTS 178 (845)
Q Consensus 100 ~~~V~~lafspdg~~L-asgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~ 178 (845)
...+..++|+|||+.+ .+...+-.|.+|.+.+.+....-. ....+..++|+|||++.+.++.-.....
T Consensus 91 ~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~-pK~~~kg~~f~~dg~f~ai~sRrDCkdy---------- 159 (447)
T KOG4497|consen 91 QAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPH-PKTNVKGYAFHPDGQFCAILSRRDCKDY---------- 159 (447)
T ss_pred CCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecc-cccCceeEEECCCCceeeeeecccHHHH----------
Confidence 8899999999999655 566678899999998866543322 3445688999999999887764221111
Q ss_pred eEEEECC---CCccCCCCC--CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCC
Q psy467 179 IHVVDLS---LVHPLGTPP--PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253 (845)
Q Consensus 179 I~vWDl~---tg~~l~~~~--~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~ 253 (845)
+++. .-..+.... ......+.|+|||..++.+..--..
T Consensus 160 ---v~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Ley---------------------------------- 202 (447)
T KOG4497|consen 160 ---VQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEY---------------------------------- 202 (447)
T ss_pred ---HHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhh----------------------------------
Confidence 1111 111111111 2344678888998888876543222
Q ss_pred ceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE------------------
Q psy467 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV------------------ 315 (845)
Q Consensus 254 ~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l------------------ 315 (845)
..+++. ..-++..++|+|.++ +|++|+.|+.+++.+--+++..
T Consensus 203 -kv~aYe-------------~~lG~k~v~wsP~~q-----flavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ 263 (447)
T KOG4497|consen 203 -KVYAYE-------------RGLGLKFVEWSPCNQ-----FLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLE 263 (447)
T ss_pred -eeeeee-------------eccceeEEEeccccc-----eEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhh
Confidence 001111 112345566666666 8899999988877653221111
Q ss_pred ------------------------------------------EEec------CCCCCEEEEEEeCCCCEEEEEeCCC---
Q psy467 316 ------------------------------------------STTE------KNSSTIRRLTFSEGGECLLGGDTEG--- 344 (845)
Q Consensus 316 ------------------------------------------~tl~------gh~~~VtslafSpdG~~Lasgs~DG--- 344 (845)
+.++ ...-.+.-++||+|..++++-.+.-
T Consensus 264 ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~Pna 343 (447)
T KOG4497|consen 264 KETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNA 343 (447)
T ss_pred hhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCce
Confidence 1111 0012467899999999999987765
Q ss_pred EEEEEecCCceEEEecCCCCCeEEEEEcCC--ceEEEE----EEEEeeCC
Q psy467 345 LKVYGWEPARQYDAQPMGWGKVQDLAVTGT--QLWFRR----VGTWSHQD 388 (845)
Q Consensus 345 I~IWDl~tgk~l~tl~~h~~~VtsVafSdg--~lLaaS----VsiW~~d~ 388 (845)
+-+||++.-+....+ ....+|+...|+++ ++++.. +..|...+
T Consensus 344 lW~Wdlq~l~l~avL-iQk~piraf~WdP~~prL~vctg~srLY~W~psg 392 (447)
T KOG4497|consen 344 LWLWDLQNLKLHAVL-IQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSG 392 (447)
T ss_pred EEEEechhhhhhhhh-hhccceeEEEeCCCCceEEEEcCCceEEEEcCCC
Confidence 899998876544433 35678999999933 344433 77787544
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-12 Score=152.26 Aligned_cols=261 Identities=17% Similarity=0.210 Sum_probs=178.6
Q ss_pred CeEEEEECCCCeeEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCcE--EEE----EcCCCCCeEEEEEcc
Q psy467 38 KKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLAVPTV--QRT----LNGHKSSITSVDFHP 110 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~tg~~--v~~----l~~h~~~V~~lafsp 110 (845)
+.+.||++.........-.-...|.|++|+| +..++|.|+.+|+|.+||+..+.. ... ...|..++..+.|..
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~ 301 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQ 301 (555)
T ss_pred ceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEec
Confidence 4799999977633333333578899999999 667888888999999999987654 222 235889999999987
Q ss_pred CCC--EEEEEECCCeEEEEECCCCce------EEEEc------CCCCCeEEEEEec-CCCEEEEEeCCCcEEEeeeeccC
Q psy467 111 YGD--YLCSGSLDSFIKLWDLRRKGC------IYTYR------GHSKSINSIRFSP-DGQWIASGGEDGVVRIGASFHLT 175 (845)
Q Consensus 111 dg~--~Lasgs~DG~I~IWDl~t~~~------l~~~~------~h~~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~ 175 (845)
+.. -|++++.||.|..|+++.-.. ..... .....+++++|.+ +.+.+++|+++|.|.-
T Consensus 302 ~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~------- 374 (555)
T KOG1587|consen 302 NEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYK------- 374 (555)
T ss_pred cCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEE-------
Confidence 554 499999999999998864322 11111 1234688999988 5677999999998876
Q ss_pred CceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCce
Q psy467 176 NTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDY 255 (845)
Q Consensus 176 ~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 255 (845)
-....... .. ...+.++..
T Consensus 375 ------~~r~g~~~----------------~~--~~~~~~~~~------------------------------------- 393 (555)
T KOG1587|consen 375 ------GCRKGYTP----------------AP--EVSYKGHST------------------------------------- 393 (555)
T ss_pred ------EeccCCcc----------------cc--ccccccccc-------------------------------------
Confidence 22111111 00 000011100
Q ss_pred eEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC-CCeEEEEecCCCCCEEEEEEeCCC
Q psy467 256 SAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE-KFSLVSTTEKNSSTIRRLTFSEGG 334 (845)
Q Consensus 256 ~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~-s~~~l~tl~gh~~~VtslafSpdG 334 (845)
...+.+.|+++.++|=+.. .+.+++ |.+|+||... ...++..+..+...|++++|||..
T Consensus 394 ---------------~~~h~g~v~~v~~nPF~~k----~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptr 453 (555)
T KOG1587|consen 394 ---------------FITHIGPVYAVSRNPFYPK----NFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTR 453 (555)
T ss_pred ---------------ccccCcceEeeecCCCccc----eeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcC
Confidence 1122344555555555542 444444 9999999988 777888888888889999999975
Q ss_pred C-EEEEEeCCC-EEEEEecCC--ceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 335 E-CLLGGDTEG-LKVYGWEPA--RQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 335 ~-~Lasgs~DG-I~IWDl~tg--k~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
. .++++..+| |.|||+... ..+.+...+....+.+.|+ .|+.|+++ +.+|.+
T Consensus 454 pavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l 515 (555)
T KOG1587|consen 454 PAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKL 515 (555)
T ss_pred ceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEc
Confidence 4 566777789 999999754 3445555566677788888 69999999 666654
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-12 Score=137.34 Aligned_cols=158 Identities=16% Similarity=0.250 Sum_probs=132.7
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC---CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK---SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t---~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
.|.--..+|+|.+|++ +++.+|++..+..|.||.... .+..++++.|...|+++.|+|..+.|++++.|..-.||.
T Consensus 5 ~~~~~~~pitchAwn~-drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~ 83 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNS-DRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWT 83 (361)
T ss_pred EeeeccCceeeeeecC-CCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccc
Confidence 3444557999999999 999999999999999998754 457889999999999999999999999999999999999
Q ss_pred CC-CC--cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce----EEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 87 LA-VP--TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC----IYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 87 l~-tg--~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~----l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
.. .+ ++...+..++..++++.|+|.++.|++|+....|.||-++...- .+.-+.+...|.+++|+|++-+|++
T Consensus 84 ~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaa 163 (361)
T KOG1523|consen 84 QPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAA 163 (361)
T ss_pred cCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecc
Confidence 94 33 33444555888999999999999999999999999998754321 1122346678999999999999999
Q ss_pred EeCCCcEEE
Q psy467 160 GGEDGVVRI 168 (845)
Q Consensus 160 gs~DG~I~I 168 (845)
|+.|+..++
T Consensus 164 Gs~D~k~rV 172 (361)
T KOG1523|consen 164 GSTDGKCRV 172 (361)
T ss_pred cccCcceeE
Confidence 999999999
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.5e-13 Score=138.65 Aligned_cols=236 Identities=19% Similarity=0.311 Sum_probs=171.4
Q ss_pred cCCCcEEEEEEecCC----CCEEEEEeCCCeEEEEECCCC--eeE--EEe-----cCCCCCeEEEEEcC-CCCEEEEEEC
Q psy467 13 AHGASVNCLALGKKS----GQVLATGGDDKKVNLWALGKS--NCI--MSL-----SGHSTPVESVQFGN-GEETLSAGCQ 78 (845)
Q Consensus 13 gH~~~V~~LafSp~d----g~~LaTgs~DG~I~IWdl~t~--~~i--~~l-----~~h~~~V~sLafSp-dg~~LaSgs~ 78 (845)
.|.-+++.+.|.|+. .++|||.+. .+++|.+... +.. ..+ ..+..++++..|+. +.++|.+++-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~D--~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi 171 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSSD--FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI 171 (364)
T ss_pred CCCCCccceEecCCccccCcchhhcccC--eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence 588899999999942 257777653 7999998632 211 111 23677999999987 7788999999
Q ss_pred CCcEEEEECCCCc---EEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEE-Ec--CCCCCeEEEEEe
Q psy467 79 SGSIKIWNLAVPT---VQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYT-YR--GHSKSINSIRFS 151 (845)
Q Consensus 79 DGtV~VWDl~tg~---~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~-~~--~h~~~V~sLafS 151 (845)
|-+..|||++++. ....+-.|..+|..++|...+ +.||+.+.||+|+++|++..+.-.. +. ....+...++|+
T Consensus 172 DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswn 251 (364)
T KOG0290|consen 172 DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWN 251 (364)
T ss_pred cCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccC
Confidence 9999999999863 345566799999999999866 5889999999999999987543222 22 224577888998
Q ss_pred c-CCCEEEEEeCC-CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEee
Q psy467 152 P-DGQWIASGGED-GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229 (845)
Q Consensus 152 P-dg~~Lasgs~D-G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~ 229 (845)
+ |.+++|+-..| ..|.+ .|++.... .++.+.+|... |
T Consensus 252 kqDpnymATf~~dS~~V~i-------------LDiR~P~t-------------------pva~L~~H~a~-------V-- 290 (364)
T KOG0290|consen 252 KQDPNYMATFAMDSNKVVI-------------LDIRVPCT-------------------PVARLRNHQAS-------V-- 290 (364)
T ss_pred cCCchHHhhhhcCCceEEE-------------EEecCCCc-------------------ceehhhcCccc-------c--
Confidence 8 56777776544 34666 88875332 15666677666 5
Q ss_pred ecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC
Q psy467 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 230 i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl 309 (845)
..++|.|... ..+++++.|..+.+||+
T Consensus 291 -------------------------NgIaWaPhS~----------------------------~hictaGDD~qaliWDl 317 (364)
T KOG0290|consen 291 -------------------------NGIAWAPHSS----------------------------SHICTAGDDCQALIWDL 317 (364)
T ss_pred -------------------------cceEecCCCC----------------------------ceeeecCCcceEEEEec
Confidence 5666666654 28999999999999999
Q ss_pred CCCe------EEEEecCCCCCEEEEEEeC-CCCEEEEEeCCCE
Q psy467 310 EKFS------LVSTTEKNSSTIRRLTFSE-GGECLLGGDTEGL 345 (845)
Q Consensus 310 ~s~~------~l~tl~gh~~~VtslafSp-dG~~Lasgs~DGI 345 (845)
.+.- ++..+. ..+.|+.+.|++ .+.+|+.+..+.+
T Consensus 318 ~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~kkl 359 (364)
T KOG0290|consen 318 QQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFGKKL 359 (364)
T ss_pred ccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEecCee
Confidence 7532 222222 356899999996 5789998887763
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-13 Score=152.88 Aligned_cols=245 Identities=18% Similarity=0.261 Sum_probs=180.1
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC--------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCe
Q psy467 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV--------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t--------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~ 123 (845)
.++..|.+.|+.++|.+....|++++.||++.+|+++. -+++.+|.+|.++|.|+++.+++..+++|+.||+
T Consensus 288 ~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~ 367 (577)
T KOG0642|consen 288 FTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGT 367 (577)
T ss_pred eeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCce
Confidence 45667999999999999999999999999999999932 2577899999999999999999999999999999
Q ss_pred EEEEECCCC----------ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC
Q psy467 124 IKLWDLRRK----------GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP 193 (845)
Q Consensus 124 I~IWDl~t~----------~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~ 193 (845)
|+.|++... .....+.+|...++.+++|+....|++++.||+++. |+......
T Consensus 368 I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~-------------w~~~~~~~---- 430 (577)
T KOG0642|consen 368 IRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRL-------------WEPTEESP---- 430 (577)
T ss_pred eeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEe-------------eccCCcCc----
Confidence 999966311 234567789999999999998889999999999999 98765544
Q ss_pred CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccc
Q psy467 194 PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVP 273 (845)
Q Consensus 194 ~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~ 273 (845)
.++......+.. ..+.+.....
T Consensus 431 -----------------~~f~~~~e~g~P--------------------------------lsvd~~ss~~--------- 452 (577)
T KOG0642|consen 431 -----------------CTFGEPKEHGYP--------------------------------LSVDRTSSRP--------- 452 (577)
T ss_pred -----------------cccCCccccCCc--------------------------------ceEeeccchh---------
Confidence 011111111000 1122211111
Q ss_pred cccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC-------CCCEEEEEEeCCCCEEEEEeCCC-E
Q psy467 274 VSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN-------SSTIRRLTFSEGGECLLGGDTEG-L 345 (845)
Q Consensus 274 ~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh-------~~~VtslafSpdG~~Lasgs~DG-I 345 (845)
.+.++...-+.-.+++......+..+... ...++.+.+.|.+.+.+++..|+ |
T Consensus 453 -------------------a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~I 513 (577)
T KOG0642|consen 453 -------------------AHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSI 513 (577)
T ss_pred -------------------HhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCce
Confidence 01122122222233333333333333211 23578889999999999999999 9
Q ss_pred EEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCCCC
Q psy467 346 KVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 346 ~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~~ 390 (845)
+++|..+++.+.....|...++++++. +|-+++.+ ++.|.++...
T Consensus 514 r~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~ 564 (577)
T KOG0642|consen 514 RFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKT 564 (577)
T ss_pred ecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchh
Confidence 999999999999999999999999999 77777777 8999876553
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.4e-12 Score=132.49 Aligned_cols=310 Identities=15% Similarity=0.236 Sum_probs=190.6
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~ 94 (845)
+.|.-+.|..+.-..|.....++.|.+|++...+-...+.....++.+++|||||+.|+ +..-+-.|.||.+.+.+...
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~ 128 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL 128 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE
Confidence 46777888874444555667889999999998888888888899999999999996655 45558899999998766443
Q ss_pred EEcCCCCCeEEEEEccCCCEEEEEEC------------------------------------CCeEEEEECCCCceEEEE
Q psy467 95 TLNGHKSSITSVDFHPYGDYLCSGSL------------------------------------DSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 95 ~l~~h~~~V~~lafspdg~~Lasgs~------------------------------------DG~I~IWDl~t~~~l~~~ 138 (845)
++..+..+..++|+|||++.+.++. +..+.+||.--.-.+..+
T Consensus 129 -~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aY 207 (447)
T KOG4497|consen 129 -LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAY 207 (447)
T ss_pred -ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeee
Confidence 3334456788999999998776553 123445543211122222
Q ss_pred cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC---------------------CCC
Q psy467 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP---------------------PQY 197 (845)
Q Consensus 139 ~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~---------------------~~~ 197 (845)
. ..-.+..++|+|.+++|++|+.|+.+++ .+--+-+....+- ...
T Consensus 208 e-~~lG~k~v~wsP~~qflavGsyD~~lrv-------------lnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~ 273 (447)
T KOG4497|consen 208 E-RGLGLKFVEWSPCNQFLAVGSYDQMLRV-------------LNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLL 273 (447)
T ss_pred e-eccceeEEEeccccceEEeeccchhhhh-------------hceeeeeehhhhccchhccCchhhhhhhhhcchhhhc
Confidence 2 2235777888888888888888888887 2222211111000 000
Q ss_pred CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccC
Q psy467 198 TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVS 277 (845)
Q Consensus 198 i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~ 277 (845)
..+++|.|..- ..|... . .+..+.. ....+.+..-.. .........+
T Consensus 274 ~~cLsf~p~~~-----~a~~~~-------~--------------se~~YE~----~~~pv~~~~lkp---~tD~pnPk~g 320 (447)
T KOG4497|consen 274 HHCLSFTPTDL-----EAHIWE-------E--------------SETIYEQ----QMTPVKVHKLKP---PTDFPNPKCG 320 (447)
T ss_pred ccccccCCCcc-----ccCccc-------c--------------chhhhhh----hhcceeeecccC---CCCCCCcccc
Confidence 01111111100 000000 0 0000000 001111111000 0011122456
Q ss_pred ceeEEEcCCCCcccceEEEEEeC--CCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc
Q psy467 278 RTSLSILPQSPMLCFILTTSSSA--DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 278 I~slafSPdg~~~~~~lLatgs~--DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk 354 (845)
+.-++||+|.. +++|-.. -+.+.+||+...+....+. ...+|.+..|+|....|+.+.... +++|...-..
T Consensus 321 ~g~lafs~Ds~-----y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~ 394 (447)
T KOG4497|consen 321 AGKLAFSCDST-----YAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPR 394 (447)
T ss_pred cceeeecCCce-----EEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEcCCCce
Confidence 77899999997 7776543 2579999999876654444 356899999999988888887776 8888876655
Q ss_pred eEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 355 QYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 355 ~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
++.. .+..-.|.++.|. +|..++..
T Consensus 395 ~V~v-P~~GF~i~~l~W~~~g~~i~l~ 420 (447)
T KOG4497|consen 395 VVGV-PKKGFNIQKLQWLQPGEFIVLC 420 (447)
T ss_pred EEec-CCCCceeeeEEecCCCcEEEEE
Confidence 5443 3344789999999 99887765
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.8e-13 Score=151.19 Aligned_cols=149 Identities=30% Similarity=0.506 Sum_probs=124.5
Q ss_pred CCCEEEE--EeCCCeEEEEECCCCee-----EEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECCCC-------c
Q psy467 27 SGQVLAT--GGDDKKVNLWALGKSNC-----IMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLAVP-------T 91 (845)
Q Consensus 27 dg~~LaT--gs~DG~I~IWdl~t~~~-----i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~tg-------~ 91 (845)
+...+|+ ++.-|.|-||++..... +-.+. ....|+.+.|.| |...||+++.||.|++|.+..+ .
T Consensus 590 n~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~-Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~t 668 (1012)
T KOG1445|consen 590 NNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLF-NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMT 668 (1012)
T ss_pred ccceEEEEecCCCceEEEEEcCCCCCCCcccccccc-cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCC
Confidence 4455654 45678999999864321 12222 356799999999 7789999999999999998754 3
Q ss_pred EEEEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEee
Q psy467 92 VQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170 (845)
Q Consensus 92 ~v~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~ 170 (845)
....+..|...|+.+.|+|- .+.|++++.|.+|++||+.+++....+.+|.+.|.+++|||||+.+|+.+.||++++
T Consensus 669 Pe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rV-- 746 (1012)
T KOG1445|consen 669 PEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRV-- 746 (1012)
T ss_pred cceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEE--
Confidence 45667889999999999994 468999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCceeEEEECCCCcc
Q psy467 171 SFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 171 ~~~~~~~~I~vWDl~tg~~ 189 (845)
|+-+++..
T Consensus 747 -----------y~Prs~e~ 754 (1012)
T KOG1445|consen 747 -----------YEPRSREQ 754 (1012)
T ss_pred -----------eCCCCCCC
Confidence 88877655
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.2e-12 Score=146.03 Aligned_cols=232 Identities=18% Similarity=0.146 Sum_probs=151.3
Q ss_pred CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCE
Q psy467 38 KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS---GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY 114 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D---GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~ 114 (845)
..|.+||. ++.....+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++... +....+.+.+.+|+|||+.
T Consensus 176 ~~L~~~D~-dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~ 253 (427)
T PRK02889 176 YQLQISDA-DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRT 253 (427)
T ss_pred cEEEEECC-CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCE
Confidence 36777776 345555566678889999999999999887643 459999999887543 3334455678999999998
Q ss_pred EE-EEECCCeEEEEE--CCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEEC--CCCc
Q psy467 115 LC-SGSLDSFIKLWD--LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDL--SLVH 188 (845)
Q Consensus 115 La-sgs~DG~I~IWD--l~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl--~tg~ 188 (845)
|+ +.+.+|...+|. +..+. ...+..+........|+|||++|+..+. +|...+ |.+ .++.
T Consensus 254 la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~I-------------y~~~~~~g~ 319 (427)
T PRK02889 254 LAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQI-------------YRMPASGGA 319 (427)
T ss_pred EEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEE-------------EEEECCCCc
Confidence 86 456777766654 44443 4555555555677899999998876654 455555 543 3222
Q ss_pred cCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCC
Q psy467 189 PLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268 (845)
Q Consensus 189 ~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~ 268 (845)
. ..+...... . .
T Consensus 320 ~---------------------~~lt~~g~~-------~---------------------------~------------- 331 (427)
T PRK02889 320 A---------------------QRVTFTGSY-------N---------------------------T------------- 331 (427)
T ss_pred e---------------------EEEecCCCC-------c---------------------------C-------------
Confidence 1 000000000 0 1
Q ss_pred CcccccccCceeEEEcCCCCcccceEEEEEeCCC---eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-
Q psy467 269 GTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR---TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG- 344 (845)
Q Consensus 269 ~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG---~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG- 344 (845)
..+|||||+ +++..+.++ .|.+||+.+++....... .......|+|||++|+.++.++
T Consensus 332 -----------~~~~SpDG~-----~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~--~~~~~p~~spdg~~l~~~~~~~g 393 (427)
T PRK02889 332 -----------SPRISPDGK-----LLAYISRVGGAFKLYVQDLATGQVTALTDT--TRDESPSFAPNGRYILYATQQGG 393 (427)
T ss_pred -----------ceEECCCCC-----EEEEEEccCCcEEEEEEECCCCCeEEccCC--CCccCceECCCCCEEEEEEecCC
Confidence 234555555 666655443 699999988765433322 3456789999999998877654
Q ss_pred ---EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 345 ---LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 345 ---I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
+.+.++ +++....+..+.+.+...+|+
T Consensus 394 ~~~l~~~~~-~g~~~~~l~~~~g~~~~p~ws 423 (427)
T PRK02889 394 RSVLAAVSS-DGRIKQRLSVQGGDVREPSWG 423 (427)
T ss_pred CEEEEEEEC-CCCceEEeecCCCCCCCCccC
Confidence 555555 456666666677778888887
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.1e-14 Score=151.63 Aligned_cols=282 Identities=18% Similarity=0.219 Sum_probs=218.3
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
.-..+.++. +|+.++.|+..|.|-.+|+.++++...+. -...|.++.|-.+.+++|++ ....+.|||-. |..++.+
T Consensus 131 GPY~~~ytr-nGrhlllgGrKGHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~-GtElHCl 206 (545)
T KOG1272|consen 131 GPYHLDYTR-NGRHLLLGGRKGHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNEQFFAVA-QKKYVYVYDNN-GTELHCL 206 (545)
T ss_pred CCeeeeecC-CccEEEecCCccceeeeecccceeeeeee-hhhhhhhhhhhcchHHHHhh-hhceEEEecCC-CcEEeeh
Confidence 345678888 99999999999999999999999888887 45679999999988888887 67889999965 7778888
Q ss_pred cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCC
Q psy467 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN 176 (845)
Q Consensus 97 ~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~ 176 (845)
+.| ..|..+.|.|.--+|++++..|.++.-|+.+|+.+..+....+.+..|+-+|-...+-+|...|+|.+
T Consensus 207 k~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSl-------- 277 (545)
T KOG1272|consen 207 KRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSL-------- 277 (545)
T ss_pred hhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEe--------
Confidence 744 46899999999888899999999999999999999999888899999999998889999999999999
Q ss_pred ceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCcee
Q psy467 177 TSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYS 256 (845)
Q Consensus 177 ~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (845)
|......+ +..+-.|.+. | ..
T Consensus 278 -----WSP~skeP--------------------LvKiLcH~g~-------V---------------------------~s 298 (545)
T KOG1272|consen 278 -----WSPNSKEP--------------------LVKILCHRGP-------V---------------------------SS 298 (545)
T ss_pred -----cCCCCcch--------------------HHHHHhcCCC-------c---------------------------ce
Confidence 98887776 4444445554 4 45
Q ss_pred EEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCE
Q psy467 257 AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGEC 336 (845)
Q Consensus 257 l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~ 336 (845)
+++.++|. +++|.+.|..++|||++....+.++.. ..+...+++|..| +
T Consensus 299 iAv~~~G~-----------------------------YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg-l 347 (545)
T KOG1272|consen 299 IAVDRGGR-----------------------------YMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG-L 347 (545)
T ss_pred EEECCCCc-----------------------------EEeecccccceeEeeeccccccceeec-CCCcccccccccc-c
Confidence 55555555 999999999999999999887777765 4578889998776 5
Q ss_pred EEEEeCCCEEEEE-ecCC--ceEEEecCC--CCCeEEEEEc-CCceEEEE----EEEEeeCCCCCccccCCCCCC
Q psy467 337 LLGGDTEGLKVYG-WEPA--RQYDAQPMG--WGKVQDLAVT-GTQLWFRR----VGTWSHQDSGFSTLDSYSAGS 401 (845)
Q Consensus 337 Lasgs~DGI~IWD-l~tg--k~l~tl~~h--~~~VtsVafS-dg~lLaaS----VsiW~~d~~~~~~~~~~~~~~ 401 (845)
||.+-.+.|.||. .-.+ ..-..+-.| .+.|.++.|. -...|.++ +..-.+.+..-.+++.+...|
T Consensus 348 LA~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsilVPGsGePN~Ds~e~nP 422 (545)
T KOG1272|consen 348 LALSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSILVPGSGEPNYDSLEDNP 422 (545)
T ss_pred eeeecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCceeEeccCCCCCCcchhccCc
Confidence 6666666699994 2221 111222223 3589999999 56677666 333344555545555544333
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=137.17 Aligned_cols=233 Identities=13% Similarity=0.163 Sum_probs=175.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc---EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-
Q psy467 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR- 131 (845)
Q Consensus 56 ~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~---~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t- 131 (845)
....+|+|.+|++|...+|.+.....|.||.....+ ..++++.|...|++++|+|..+.|++++.|..-++|....
T Consensus 8 ~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~ 87 (361)
T KOG1523|consen 8 RLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSG 87 (361)
T ss_pred eccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCC
Confidence 345789999999999999999999999999987654 6678889999999999999999999999999999999833
Q ss_pred C--ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe
Q psy467 132 K--GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 132 ~--~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
+ ++.-.+..++...+++.|+|.++.||+|+....|.+ |-.+..+.
T Consensus 88 ~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isV-------------cy~E~ENd-------------------- 134 (361)
T KOG1523|consen 88 GTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISV-------------CYYEQEND-------------------- 134 (361)
T ss_pred CeeccceeEEEeccceeeEeecCcCceEEeccCccEEEE-------------EEEecccc--------------------
Confidence 3 334445568889999999999999999998888888 54432221
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCc
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~ 289 (845)
. |.......++...|+++.|+|++-
T Consensus 135 ---------W---------------------------------------------WVsKhikkPirStv~sldWhpnnV- 159 (361)
T KOG1523|consen 135 ---------W---------------------------------------------WVSKHIKKPIRSTVTSLDWHPNNV- 159 (361)
T ss_pred ---------e---------------------------------------------ehhhhhCCccccceeeeeccCCcc-
Confidence 0 000000112223344555555554
Q ss_pred ccceEEEEEeCCCeEEEEECC-----C-------------CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 290 LCFILTTSSSADRTVNFWDLE-----K-------------FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 290 ~~~~lLatgs~DG~I~IWDl~-----s-------------~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
+|++|+.|+..++|..- . |+++.++....+.|..+.|+|+|..|+-.+.|. +.+-|.
T Consensus 160 ----LlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da 235 (361)
T KOG1523|consen 160 ----LLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDA 235 (361)
T ss_pred ----eecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeec
Confidence 99999999999999641 1 234444545578999999999999999999999 988887
Q ss_pred cCCc-eEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 351 EPAR-QYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 351 ~tgk-~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.... .+..+....-+..++.|- +...++++
T Consensus 236 ~~p~~~v~~~~~~~lP~ls~~~ise~~vv~ag 267 (361)
T KOG1523|consen 236 AGPSERVQSVATAQLPLLSVSWISENSVVAAG 267 (361)
T ss_pred CCCchhccchhhccCCceeeEeecCCceeecC
Confidence 6654 344554444778888887 77777666
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.1e-12 Score=145.56 Aligned_cols=234 Identities=18% Similarity=0.134 Sum_probs=153.5
Q ss_pred CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCE
Q psy467 38 KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS---GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY 114 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D---GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~ 114 (845)
..|.+||.. +...+.+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++... +....+...+.+|+|||+.
T Consensus 184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~ 261 (433)
T PRK04922 184 YALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRR 261 (433)
T ss_pred EEEEEECCC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCE
Confidence 368899985 44455566678889999999999999987743 469999998876543 3334455567899999987
Q ss_pred EE-EEECCC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 115 LC-SGSLDS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 115 La-sgs~DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
|+ +.+.+| .|++||+.+++. ..+..+.......+|+|||++|+.++. +|...+ +++|+.+++.
T Consensus 262 l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~i-----------y~~dl~~g~~- 328 (433)
T PRK04922 262 LALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQI-----------YRVAASGGSA- 328 (433)
T ss_pred EEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceE-----------EEEECCCCCe-
Confidence 75 445555 599999988764 345445555567899999998887764 444333 2266654433
Q ss_pred CCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCc
Q psy467 191 GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGT 270 (845)
Q Consensus 191 ~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~ 270 (845)
. .+..+... . ...
T Consensus 329 -------------------~-~lt~~g~~-------~---------------------------~~~------------- 341 (433)
T PRK04922 329 -------------------E-RLTFQGNY-------N---------------------------ARA------------- 341 (433)
T ss_pred -------------------E-EeecCCCC-------c---------------------------cCE-------------
Confidence 1 00000000 0 223
Q ss_pred ccccccCceeEEEcCCCCcccceEEEEEeCCC---eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC---
Q psy467 271 CVPVSVSRTSLSILPQSPMLCFILTTSSSADR---TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--- 344 (845)
Q Consensus 271 ~~~~~~~I~slafSPdg~~~~~~lLatgs~DG---~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--- 344 (845)
+|||||+ .++..+.++ .|.+||+.+++.. .+. +........|+|||++|+..+.++
T Consensus 342 -----------~~SpDG~-----~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~ 403 (433)
T PRK04922 342 -----------SVSPDGK-----KIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRG 403 (433)
T ss_pred -----------EECCCCC-----EEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCce
Confidence 4445554 565544332 6999999887755 333 223456779999999988776642
Q ss_pred -EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 345 -LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 345 -I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
|.+++.+ +.....+..+.+.+..++|+
T Consensus 404 ~L~~~~~~-g~~~~~l~~~~g~~~~p~ws 431 (433)
T PRK04922 404 VLAAVSTD-GRVRQRLVSADGEVREPAWS 431 (433)
T ss_pred EEEEEECC-CCceEEcccCCCCCCCCccC
Confidence 7777774 44556666666777778876
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.2e-13 Score=136.13 Aligned_cols=249 Identities=20% Similarity=0.255 Sum_probs=169.2
Q ss_pred eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc-CCCCCeEEEEEccCCCEEEEEECCCeEEEEE
Q psy467 50 CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 50 ~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWD 128 (845)
+...+.+|.+.|+++.|..++. |.+|...|.|.+|++.+.+....+. .+...|+.+.-.|+ ..+.+-+.|+.+.+|+
T Consensus 6 P~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ 83 (323)
T KOG0322|consen 6 PFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWT 83 (323)
T ss_pred CeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEE
Confidence 4556778999999999987765 8999999999999999998888887 57778899888887 5688889999999999
Q ss_pred CCCCceEEE--------------Ec---------------------------------------CCCCCeEEEEEec-CC
Q psy467 129 LRRKGCIYT--------------YR---------------------------------------GHSKSINSIRFSP-DG 154 (845)
Q Consensus 129 l~t~~~l~~--------------~~---------------------------------------~h~~~V~sLafSP-dg 154 (845)
+..+..+.. +. +..+.+.|..+.. ++
T Consensus 84 ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~ 163 (323)
T KOG0322|consen 84 IAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACG 163 (323)
T ss_pred ccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccccc
Confidence 865322111 00 0112333333322 12
Q ss_pred C--EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 155 Q--WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 155 ~--~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
. ++++|.++|.+.+ ||+.++..+ ..+....
T Consensus 164 s~~lllaGyEsghvv~-------------wd~S~~~~~--------------------~~~~~~~--------------- 195 (323)
T KOG0322|consen 164 STFLLLAGYESGHVVI-------------WDLSTGDKI--------------------IQLPQSS--------------- 195 (323)
T ss_pred ceEEEEEeccCCeEEE-------------EEccCCcee--------------------ecccccc---------------
Confidence 2 3455666666666 777665331 1110000
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
........+..++.++.+.+... .=++|+.+..+..|++...
T Consensus 196 ---------------------------------kv~~~~ash~qpvlsldyas~~~-----rGisgga~dkl~~~Sl~~s 237 (323)
T KOG0322|consen 196 ---------------------------------KVESPNASHKQPVLSLDYASSCD-----RGISGGADDKLVMYSLNHS 237 (323)
T ss_pred ---------------------------------ccccchhhccCcceeeeechhhc-----CCcCCCccccceeeeeccc
Confidence 00011122334455555544322 3356777778888887542
Q ss_pred --eE--EEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----E
Q psy467 313 --SL--VSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----V 381 (845)
Q Consensus 313 --~~--l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----V 381 (845)
.+ ...+.-.+-.|..+..-||++.+|+++.|+ ||||.+.+.+.+..++-|.+.|++++|+ +..++|++ +
T Consensus 238 ~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rI 317 (323)
T KOG0322|consen 238 TGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARI 317 (323)
T ss_pred cCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceE
Confidence 22 112222234688899999999999999999 9999999999999999999999999999 66777777 9
Q ss_pred EEEee
Q psy467 382 GTWSH 386 (845)
Q Consensus 382 siW~~ 386 (845)
+.|.+
T Consensus 318 SLWkL 322 (323)
T KOG0322|consen 318 SLWKL 322 (323)
T ss_pred Eeeec
Confidence 99964
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-13 Score=151.18 Aligned_cols=126 Identities=27% Similarity=0.470 Sum_probs=110.2
Q ss_pred EEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE-cCCCCCeEEEEEcc--CCCEEEEEECCCeEEEE
Q psy467 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHP--YGDYLCSGSLDSFIKLW 127 (845)
Q Consensus 51 i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l-~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IW 127 (845)
...+.||.+.|+|++|+.+|.+|++|++|-.+.|||.-..+.+..+ .+|...|.++.|-| +++.+++|..|..|+++
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf 122 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF 122 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence 4567899999999999999999999999999999999988888877 57999999999999 45688999999999999
Q ss_pred ECCC----------CceEEEEcCCCCCeEEEEEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 128 DLRR----------KGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 128 Dl~t----------~~~l~~~~~h~~~V~sLafSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
|+.. ......+..|...|..++-.|++ +.+.++++||+++- +|++....
T Consensus 123 dl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQ-------------yDiREph~ 182 (758)
T KOG1310|consen 123 DLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQ-------------YDIREPHV 182 (758)
T ss_pred ecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceee-------------ecccCCcc
Confidence 9974 23445567788999999999988 78999999999999 99986443
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.48 E-value=1e-11 Score=139.64 Aligned_cols=307 Identities=12% Similarity=0.107 Sum_probs=183.2
Q ss_pred CCEEEE-EeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEE
Q psy467 28 GQVLAT-GGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV 106 (845)
Q Consensus 28 g~~LaT-gs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~l 106 (845)
++++++ -..+|.|.+.|..+.+.+.++......-..+.|+|||+++++++.||.|.++|+.+++.+.++.... ...++
T Consensus 5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i 83 (369)
T PF02239_consen 5 GNLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGI 83 (369)
T ss_dssp GGEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEE
T ss_pred ccEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceE
Confidence 455654 4568999999999999999998655444567899999999999999999999999999999998544 46889
Q ss_pred EEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCC-------CCCeEEEEEecCCCEEEEEeC-CCcEEEeeeeccCCc
Q psy467 107 DFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGH-------SKSINSIRFSPDGQWIASGGE-DGVVRIGASFHLTNT 177 (845)
Q Consensus 107 afspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h-------~~~V~sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~ 177 (845)
++++||+++++++ .++.+.++|.++.+.+..+... ...+.++..+|....++..-. .+.|.+
T Consensus 84 ~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~v--------- 154 (369)
T PF02239_consen 84 AVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWV--------- 154 (369)
T ss_dssp EE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEE---------
T ss_pred EEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEE---------
Confidence 9999999998765 6899999999999988877532 346778888888885555444 477776
Q ss_pred eeEEEECCCCccCC--CC-CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCc
Q psy467 178 SIHVVDLSLVHPLG--TP-PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCD 254 (845)
Q Consensus 178 ~I~vWDl~tg~~l~--~~-~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~ 254 (845)
.|....+.+. .. ......+..|+|+++++..-..... .+.+.+....
T Consensus 155 ----Vdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn-----~i~viD~~~~--------------------- 204 (369)
T PF02239_consen 155 ----VDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSN-----KIAVIDTKTG--------------------- 204 (369)
T ss_dssp ----EETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGT-----EEEEEETTTT---------------------
T ss_pred ----EEeccccccceeeecccccccccccCcccceeeecccccc-----eeEEEeeccc---------------------
Confidence 6655543221 11 1344567889999987654222111 1222111110
Q ss_pred eeEEEcCCCCcCCCCcccccccCceeEEEc--CCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeC
Q psy467 255 YSAIFQPHRSLNRSGTCVPVSVSRTSLSIL--PQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE 332 (845)
Q Consensus 255 ~~l~fspdg~~~~~~~~~~~~~~I~slafS--Pdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp 332 (845)
..+..-+.++....+........-....|. ..+. ..++.-....+.+||..+++.+.++....++ ..+..+|
T Consensus 205 k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~-----~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP 278 (369)
T PF02239_consen 205 KLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGY-----FAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHP 278 (369)
T ss_dssp EEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSS-----SEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--T
T ss_pred eEEEEeeccccccccccccccCCCcceEEeeccccc-----eecccccCCccccchhhcCeEEEEEECCCCc-ceeecCC
Confidence 111111112211111111111111222232 2222 2222222346778999999999999976666 7788899
Q ss_pred CCCEEEEE---eCC-C-EEEEEecCCceEEEecCCC-CCeEEEEEc-CCceEEEE
Q psy467 333 GGECLLGG---DTE-G-LKVYGWEPARQYDAQPMGW-GKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 333 dG~~Lasg---s~D-G-I~IWDl~tgk~l~tl~~h~-~~VtsVafS-dg~lLaaS 380 (845)
++++|.+. +.+ . |.++|.++.+.+.++.... ..+..+.|+ +|+.+.+|
T Consensus 279 ~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS 333 (369)
T PF02239_consen 279 DSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVS 333 (369)
T ss_dssp T-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEE
T ss_pred CCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEE
Confidence 99999998 333 3 9999999988777775332 359999999 99988765
|
... |
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-11 Score=131.72 Aligned_cols=236 Identities=14% Similarity=0.241 Sum_probs=176.4
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC--CcEEEEECCCCc
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS--GSIKIWNLAVPT 91 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D--GtV~VWDl~tg~ 91 (845)
....+..+.|+. +...|..|+.|| .++|+.+..............|.-+-|+. .++|..+.+ ..+++.+.+.+.
T Consensus 4 ~~~ti~~~~~Nq-d~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~ 79 (391)
T KOG2110|consen 4 KKPTINFIGFNQ-DSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKT 79 (391)
T ss_pred CCcceeeeeecc-ceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCc
Confidence 345678888987 888999999987 67887765443222222334455566664 456655544 459999999888
Q ss_pred EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC---CCCCeEEEEEecCCCEEEEEe--CCCcE
Q psy467 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG---HSKSINSIRFSPDGQWIASGG--EDGVV 166 (845)
Q Consensus 92 ~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~---h~~~V~sLafSPdg~~Lasgs--~DG~I 166 (845)
.+..+. ...+|.++.++. +.|+++-.+. |+|||+++.+.++++.. +...+.++.+++.+.++|.-+ ..|.|
T Consensus 80 ~ICe~~-fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV 155 (391)
T KOG2110|consen 80 TICEIF-FPTSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDV 155 (391)
T ss_pred eEEEEe-cCCceEEEEEcc--ceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceE
Confidence 887776 566799999874 4566665544 99999999999988864 334466666666677887543 34666
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
.+ ||+.+-+. +..+..|.+. +
T Consensus 156 ~l-------------~d~~nl~~--------------------v~~I~aH~~~-------l------------------- 176 (391)
T KOG2110|consen 156 VL-------------FDTINLQP--------------------VNTINAHKGP-------L------------------- 176 (391)
T ss_pred EE-------------EEccccee--------------------eeEEEecCCc-------e-------------------
Confidence 66 99998877 7777777777 6
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCe-EEEEECCCCeEEEEecCC--CC
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT-VNFWDLEKFSLVSTTEKN--SS 323 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~-I~IWDl~s~~~l~tl~gh--~~ 323 (845)
.+++|+++|. +|||++..|+ ||||.+.+|+.+..|... ..
T Consensus 177 --------Aalafs~~G~-----------------------------llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~ 219 (391)
T KOG2110|consen 177 --------AALAFSPDGT-----------------------------LLATASEKGTVIRVFSVPEGQKLYEFRRGTYPV 219 (391)
T ss_pred --------eEEEECCCCC-----------------------------EEEEeccCceEEEEEEcCCccEeeeeeCCceee
Confidence 6777777777 9999999986 699999999999999843 34
Q ss_pred CEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 324 TIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 324 ~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
.|.+++|+|++++|++.+..+ |+||.++..
T Consensus 220 ~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 220 SIYSLSFSPDSQFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred EEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence 688999999999999999988 999998753
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.7e-11 Score=129.36 Aligned_cols=233 Identities=16% Similarity=0.223 Sum_probs=166.8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC--eEEEEECCCCceE
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS--FIKLWDLRRKGCI 135 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG--~I~IWDl~t~~~l 135 (845)
...+..+.|+.+...|..|+.|| .+++..+..............|..+-|+ ..++|..+.+. .+++++++.+..+
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~~I 81 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKTTI 81 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCceE
Confidence 44677788999999999998887 5677776554322222223335555565 44666665543 5899999888777
Q ss_pred EEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec
Q psy467 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 136 ~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~ 215 (845)
..+. ....|.++.+. .+.|+++-++ .|+| ||+++.+. +.++..
T Consensus 82 Ce~~-fpt~IL~VrmN--r~RLvV~Lee-~IyI-------------ydI~~Mkl--------------------LhTI~t 124 (391)
T KOG2110|consen 82 CEIF-FPTSILAVRMN--RKRLVVCLEE-SIYI-------------YDIKDMKL--------------------LHTIET 124 (391)
T ss_pred EEEe-cCCceEEEEEc--cceEEEEEcc-cEEE-------------Eeccccee--------------------ehhhhc
Confidence 7765 56779999987 4556666554 4888 99999888 333221
Q ss_pred CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 216 GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 216 h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
-... . ....+++++.. +. ++
T Consensus 125 ~~~n-------~--------------------------~gl~AlS~n~~----------------------n~-----yl 144 (391)
T KOG2110|consen 125 TPPN-------P--------------------------KGLCALSPNNA----------------------NC-----YL 144 (391)
T ss_pred cCCC-------c--------------------------cceEeeccCCC----------------------Cc-----eE
Confidence 1000 0 01233333321 11 44
Q ss_pred EEE--eCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC--EEEEEecCCceEEEecCCC--CCeEEE
Q psy467 296 TSS--SADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--LKVYGWEPARQYDAQPMGW--GKVQDL 369 (845)
Q Consensus 296 atg--s~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk~l~tl~~h~--~~VtsV 369 (845)
|.- ...|.|.+||+.+.+.+..+..|.+++.+++|+++|.+||++++.| ||||.+.+|+.+..|+... ..|.++
T Consensus 145 Ayp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL 224 (391)
T KOG2110|consen 145 AYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSL 224 (391)
T ss_pred EecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEE
Confidence 432 2368999999999999999999999999999999999999999999 9999999999999887544 468999
Q ss_pred EEc-CCceEEEE-----EEEEeeCCCC
Q psy467 370 AVT-GTQLWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 370 afS-dg~lLaaS-----VsiW~~d~~~ 390 (845)
+|+ ++++|+++ |-++.++...
T Consensus 225 ~Fs~ds~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 225 SFSPDSQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred EECCCCCeEEEecCCCeEEEEEecccc
Confidence 999 99999988 8888776554
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.2e-11 Score=139.06 Aligned_cols=122 Identities=17% Similarity=0.172 Sum_probs=93.1
Q ss_pred CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC---CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCE
Q psy467 38 KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ---SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY 114 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~---DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~ 114 (845)
..|.+||.. +...+.+..|...+.+.+|+|||+.|+..+. +..|.+||+.+++.. .+..+.+.+...+|+|||+.
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~ 259 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRK 259 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCE
Confidence 378888875 4555667778889999999999999988764 468999999988653 44446667788999999987
Q ss_pred EE-EEECCCe--EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC
Q psy467 115 LC-SGSLDSF--IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 115 La-sgs~DG~--I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
|+ +.+.++. |.+||+.++.. ..+..+........|+|||+.|+..+.
T Consensus 260 la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~ 309 (435)
T PRK05137 260 VVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESD 309 (435)
T ss_pred EEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEEC
Confidence 75 4555554 78889887654 445556666778999999999887663
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.6e-11 Score=141.22 Aligned_cols=151 Identities=12% Similarity=0.111 Sum_probs=107.1
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEe---CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE-ECCC--cE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGG---DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG-CQSG--SI 82 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs---~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg-s~DG--tV 82 (845)
+.+..+...+.+.+||| +|+.||..+ .+..|.+|++.+++... +......+..++|+|||+.|+.. +.+| .|
T Consensus 192 ~~lt~~~~~~~~p~wSP-DG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I 269 (429)
T PRK03629 192 FVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNL 269 (429)
T ss_pred EEeecCCCceeeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEE
Confidence 55667778899999999 898888654 24579999998775433 22233445578999999988865 3344 58
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC-C--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD-S--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D-G--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
.+||+++++... +..+...+....|+|||+.|+.++.+ + .|.++|+.++.. ..+........+..|+|||++|+.
T Consensus 270 ~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpDG~~Ia~ 347 (429)
T PRK03629 270 YVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVM 347 (429)
T ss_pred EEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEE
Confidence 999999887554 43345567889999999988777654 3 455557766544 333334445667899999999887
Q ss_pred EeCC
Q psy467 160 GGED 163 (845)
Q Consensus 160 gs~D 163 (845)
.+.+
T Consensus 348 ~~~~ 351 (429)
T PRK03629 348 VSSN 351 (429)
T ss_pred EEcc
Confidence 6644
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-11 Score=130.05 Aligned_cols=296 Identities=16% Similarity=0.177 Sum_probs=183.4
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-CCCCCeEEEEEcCC-CCEEEEEECCCcEEEEECCCC---
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNG-EETLSAGCQSGSIKIWNLAVP--- 90 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafSpd-g~~LaSgs~DGtV~VWDl~tg--- 90 (845)
-.+..++|++ .-..+|++..|-.|++|+-.. .+...++ .....|+|++|-|. +..|+.|+. +-|.+|.....
T Consensus 99 ~dlr~~aWhq-H~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~ 175 (445)
T KOG2139|consen 99 IDLRGVAWHQ-HIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNA 175 (445)
T ss_pred cceeeEeech-hhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCccccc
Confidence 3577899988 556788889999999999766 4444444 24568999999995 456777765 45999987531
Q ss_pred -cE----------EEEEcCCCCCeEEEEEccCCCEEEEEEC-CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 91 -TV----------QRTLNGHKSSITSVDFHPYGDYLCSGSL-DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 91 -~~----------v~~l~~h~~~V~~lafspdg~~Lasgs~-DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
.. +..-.+| .+|+++.|.+||..+++++. |..|.|||..++..+.-....-+.+.-+.|||||.+|+
T Consensus 176 ~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lf 254 (445)
T KOG2139|consen 176 NRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLF 254 (445)
T ss_pred ccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEE
Confidence 11 1122344 57999999999999999874 56899999999887665544567788999999999999
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCC-ccC-CCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLV-HPL-GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg-~~l-~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
++.-|+..++ |+.... ... .......+....|+|+|+.+......... ++++......
T Consensus 255 aAt~davfrl-------------w~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~-------lysl~f~~~~ 314 (445)
T KOG2139|consen 255 AATCDAVFRL-------------WQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPR-------LYSLTFDGED 314 (445)
T ss_pred Eecccceeee-------------ehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCce-------EEEEeecCCC
Confidence 9999999999 854332 221 12235678889999999977654443333 4333222111
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcC--CCCcccccccCceeEEEcCCCCcccceEEEEEeCCC--------eEEE
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLN--RSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR--------TVNF 306 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~--~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG--------~I~I 306 (845)
....+.... ..+..-.|-... ..+ .....++..+++|.|.|. +||+.-..+ .|.+
T Consensus 315 ~~~~~~~~~---------k~~lliaDL~e~ti~ag-~~l~cgeaq~lawDpsGe-----yLav~fKg~~~v~~~k~~i~~ 379 (445)
T KOG2139|consen 315 SVFLRPQSI---------KRVLLIADLQEVTICAG-QRLCCGEAQCLAWDPSGE-----YLAVIFKGQSFVLLCKLHISR 379 (445)
T ss_pred ccccCcccc---------eeeeeeccchhhhhhcC-cccccCccceeeECCCCC-----EEEEEEcCCchhhhhhhhhhh
Confidence 111100000 111111110000 000 112356778999999998 777765443 4677
Q ss_pred EECCCCeEEEEec-C--CCCCEEEEEEeC---CCCEEEEEeCCC-EEEEEe
Q psy467 307 WDLEKFSLVSTTE-K--NSSTIRRLTFSE---GGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 307 WDl~s~~~l~tl~-g--h~~~VtslafSp---dG~~Lasgs~DG-I~IWDl 350 (845)
||.+..-.+.-.. + ....-..++|+| +|.+|..+=..| +.-|++
T Consensus 380 fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl 430 (445)
T KOG2139|consen 380 FDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPL 430 (445)
T ss_pred hcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeee
Confidence 8876543332221 1 112245566665 455555554444 554444
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.3e-13 Score=143.04 Aligned_cols=156 Identities=22% Similarity=0.307 Sum_probs=123.3
Q ss_pred EEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC
Q psy467 19 NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 19 ~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~ 98 (845)
.+++|+. +|..|++|+.||++|||++.+...+.....|...|.++.|+|||+.|++.+.| ..+||+++++..+.....
T Consensus 148 k~vaf~~-~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~ 225 (398)
T KOG0771|consen 148 KVVAFNG-DGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTP 225 (398)
T ss_pred eEEEEcC-CCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCC
Confidence 7899999 99999999999999999998888888888899999999999999999999999 999999999976666542
Q ss_pred --CCCCeEEEEEccCC---CEEE--EEECCCeEEEEECCCCce-----EEEEcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 99 --HKSSITSVDFHPYG---DYLC--SGSLDSFIKLWDLRRKGC-----IYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 99 --h~~~V~~lafspdg---~~La--sgs~DG~I~IWDl~t~~~-----l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
.......+.|+.|+ .+++ ....-+.|..||+..... .++.......|.+++.++||++++.|+.||.|
T Consensus 226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcE
Confidence 23346678888877 3332 333445677776643221 12222234579999999999999999999999
Q ss_pred EEeeeeccCCceeEEEECCCCcc
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.+ ++..+.+.
T Consensus 306 ai-------------~~~~~lq~ 315 (398)
T KOG0771|consen 306 AI-------------YDAKSLQR 315 (398)
T ss_pred EE-------------EEeceeee
Confidence 99 88876665
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.3e-12 Score=140.00 Aligned_cols=162 Identities=22% Similarity=0.305 Sum_probs=132.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEE
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDF 108 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~laf 108 (845)
+.|+.++.||.+.|.+ ..++.-+.+..|.+.|.|-.|+|||.-|++++.||.|++|.-. |-...++.....+|.|++|
T Consensus 76 d~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs-GMLRStl~Q~~~~v~c~~W 153 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS-GMLRSTVVQNEESIRCARW 153 (737)
T ss_pred ceEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc-chHHHHHhhcCceeEEEEE
Confidence 5788889999999988 4567777888999999999999999999999999999999864 5444445446778999999
Q ss_pred ccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCc
Q psy467 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 109 spdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
.|+.+.++.+. .+.+.+=.+.....+..+++|.+-|.++.|++..+.+++|++|-..++ ||.....
T Consensus 154 ~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKv-------------WD~~G~~ 219 (737)
T KOG1524|consen 154 APNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKI-------------WDAQGAN 219 (737)
T ss_pred CCCCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEe-------------ecccCcc
Confidence 99887665543 356777777777778888999999999999999999999999999999 9976544
Q ss_pred cCCC-CCCCCCcceeecCC
Q psy467 189 PLGT-PPPQYTSSVPFSHN 206 (845)
Q Consensus 189 ~l~~-~~~~~i~svs~spd 206 (845)
...+ .+...+++++|.|+
T Consensus 220 Lf~S~~~ey~ITSva~npd 238 (737)
T KOG1524|consen 220 LFTSAAEEYAITSVAFNPE 238 (737)
T ss_pred cccCChhccceeeeeeccc
Confidence 4333 23566777888777
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.8e-11 Score=131.80 Aligned_cols=304 Identities=13% Similarity=0.119 Sum_probs=175.1
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWD 86 (845)
+.++....+.-..+.|+| +|+++++++.||.|.++|+.+.+.+.++... ....++++|+||+++++++ ..+.+.++|
T Consensus 29 ~~~i~~~~~~h~~~~~s~-Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-~~~~~i~~s~DG~~~~v~n~~~~~v~v~D 106 (369)
T PF02239_consen 29 VARIPTGGAPHAGLKFSP-DGRYLYVANRDGTVSVIDLATGKVVATIKVG-GNPRGIAVSPDGKYVYVANYEPGTVSVID 106 (369)
T ss_dssp EEEEE-STTEEEEEE-TT--SSEEEEEETTSEEEEEETTSSSEEEEEE-S-SEEEEEEE--TTTEEEEEEEETTEEEEEE
T ss_pred EEEEcCCCCceeEEEecC-CCCEEEEEcCCCeEEEEECCcccEEEEEecC-CCcceEEEcCCCCEEEEEecCCCceeEec
Confidence 455655444434577898 9999999999999999999999999998744 4578899999999998776 489999999
Q ss_pred CCCCcEEEEEcCC-------CCCeEEEEEccCCCEEEEEECC-CeEEEEECCCCceEE-EEcCCCCCeEEEEEecCCCEE
Q psy467 87 LAVPTVQRTLNGH-------KSSITSVDFHPYGDYLCSGSLD-SFIKLWDLRRKGCIY-TYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 87 l~tg~~v~~l~~h-------~~~V~~lafspdg~~Lasgs~D-G~I~IWDl~t~~~l~-~~~~h~~~V~sLafSPdg~~L 157 (845)
.++.+.++.+... ...+..+..+|....++..-.| +.|.+.|....+.+. .............|+|+++++
T Consensus 107 ~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~ 186 (369)
T PF02239_consen 107 AETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYF 186 (369)
T ss_dssp TTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEE
T ss_pred cccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCccccee
Confidence 9999999887532 3467788888988866666554 888888987654332 222345567889999999987
Q ss_pred EEE-eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 158 ASG-GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 158 asg-s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+++ ..++.+.+ +|..+++.......... |.......+. |...+ .+|........
T Consensus 187 ~va~~~sn~i~v-------------iD~~~~k~v~~i~~g~~------p~~~~~~~~p-hp~~g-----~vw~~~~~~~~ 241 (369)
T PF02239_consen 187 LVAANGSNKIAV-------------IDTKTGKLVALIDTGKK------PHPGPGANFP-HPGFG-----PVWATSGLGYF 241 (369)
T ss_dssp EEEEGGGTEEEE-------------EETTTTEEEEEEE-SSS------BEETTEEEEE-ETTTE-----EEEEEEBSSSS
T ss_pred eecccccceeEE-------------EeeccceEEEEeecccc------cccccccccc-CCCcc-----eEEeeccccce
Confidence 665 44556777 88777665211100000 0000000000 00000 01110000000
Q ss_pred cccccchhhhhhccCCCceeEEEcCCC-----CcCCCCcccccccCceeEEEcCCCCcccceEEEEE----eCCCeEEEE
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHR-----SLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS----SADRTVNFW 307 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg-----~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg----s~DG~I~IW 307 (845)
. ...+.-.+-. .|.... .+...+.-.-+..||+++ ++.+. ...+.|.++
T Consensus 242 ~----------------~~~ig~~~v~v~d~~~wkvv~-~I~~~G~glFi~thP~s~-----~vwvd~~~~~~~~~v~vi 299 (369)
T PF02239_consen 242 A----------------IPLIGTDPVSVHDDYAWKVVK-TIPTQGGGLFIKTHPDSR-----YVWVDTFLNPDADTVQVI 299 (369)
T ss_dssp E----------------EEEEE--TTT-STTTBTSEEE-EEE-SSSS--EE--TT-S-----EEEEE-TT-SSHT-EEEE
T ss_pred e----------------cccccCCccccchhhcCeEEE-EEECCCCcceeecCCCCc-----cEEeeccCCCCCceEEEE
Confidence 0 0000000000 000000 011112225566788888 67666 445899999
Q ss_pred ECCCCeEEEEecCC-CCCEEEEEEeCCCCEEEEEeC--CC-EEEEEecCCceEEEec
Q psy467 308 DLEKFSLVSTTEKN-SSTIRRLTFSEGGECLLGGDT--EG-LKVYGWEPARQYDAQP 360 (845)
Q Consensus 308 Dl~s~~~l~tl~gh-~~~VtslafSpdG~~Lasgs~--DG-I~IWDl~tgk~l~tl~ 360 (845)
|.++.+.+.++... ...+.++.|++||+.+..+.. ++ |.+||..+.+.+..+.
T Consensus 300 D~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 300 DKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp ECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred ECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence 99999888887632 235999999999997766544 44 9999999999988876
|
... |
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.2e-12 Score=141.37 Aligned_cols=218 Identities=19% Similarity=0.267 Sum_probs=150.0
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee----EEEecCCCCCeEEEEE-----cCCCCEEEEEECCCcEEEEEC
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC----IMSLSGHSTPVESVQF-----GNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~----i~~l~~h~~~V~sLaf-----Spdg~~LaSgs~DGtV~VWDl 87 (845)
.+....++- .|++|+..-. ..+.+|+...+.. +....-......|-+| .+++--|+.|-..|.|.+.|.
T Consensus 125 ~~~~~~~~~-~gd~lcFnvg-~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp 202 (636)
T KOG2394|consen 125 IVTNTNQSG-KGDRLCFNVG-RELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDP 202 (636)
T ss_pred ceeeccccC-CCCEEEEecC-CeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecc
Confidence 344555555 5666665433 3688888764321 1111111222334444 346667888989999999988
Q ss_pred CCCcEEEEEc----CCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCC--------------Cc--------------e
Q psy467 88 AVPTVQRTLN----GHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRR--------------KG--------------C 134 (845)
Q Consensus 88 ~tg~~v~~l~----~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t--------------~~--------------~ 134 (845)
...+..+.+. -.+..|+|+.|-|.+ ..|+++-.+|.+.+||..- +. +
T Consensus 203 ~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNP 282 (636)
T KOG2394|consen 203 INFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNP 282 (636)
T ss_pred hhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCc
Confidence 7533222121 134679999999954 5677778899999997631 11 1
Q ss_pred EEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe
Q psy467 135 IYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 135 l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~ 214 (845)
+..+.-..+.|..++|+|||++||+.+.||.++| +|..+.+. +..++
T Consensus 283 v~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRv-------------F~fdt~eL--------------------lg~mk 329 (636)
T KOG2394|consen 283 VARWHIGEGSINEFAFSPDGKYLATVSQDGFLRI-------------FDFDTQEL--------------------LGVMK 329 (636)
T ss_pred cceeEeccccccceeEcCCCceEEEEecCceEEE-------------eeccHHHH--------------------HHHHH
Confidence 1122223457889999999999999999999999 99887776 33333
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
..-++ + .+++|+|||+ +
T Consensus 330 SYFGG-------L---------------------------LCvcWSPDGK-----------------------------y 346 (636)
T KOG2394|consen 330 SYFGG-------L---------------------------LCVCWSPDGK-----------------------------Y 346 (636)
T ss_pred hhccc-------e---------------------------EEEEEcCCcc-----------------------------E
Confidence 33333 3 5666666666 9
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeC
Q psy467 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE 332 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp 332 (845)
+++|+.|.-|.||.+..++.+..-++|.++|+.++|+|
T Consensus 347 IvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 347 IVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred EEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 99999999999999999999999999999999999985
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.9e-11 Score=145.79 Aligned_cols=169 Identities=21% Similarity=0.327 Sum_probs=130.6
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC-------eeEEEecCCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-------NCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~-------~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
+..|..|+..|..++.++..+.++++|+.||+|++|+...- +...++......+.++...+.++.+|+++.||
T Consensus 1041 VAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG 1120 (1431)
T KOG1240|consen 1041 VAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDG 1120 (1431)
T ss_pred eehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCC
Confidence 56788999999999999967799999999999999997431 23344444678899999999999999999999
Q ss_pred cEEEEECCCCc-------EEEEEcCC-CCC-eEEEEEcc-CCC-EEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEE
Q psy467 81 SIKIWNLAVPT-------VQRTLNGH-KSS-ITSVDFHP-YGD-YLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINS 147 (845)
Q Consensus 81 tV~VWDl~tg~-------~v~~l~~h-~~~-V~~lafsp-dg~-~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~s 147 (845)
.|.+.+++... +.+....+ .+. |..-+|.. .+. .++.+...+.|..||++.....++++ ...+.|++
T Consensus 1121 ~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTS 1200 (1431)
T KOG1240|consen 1121 SVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTS 1200 (1431)
T ss_pred eEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeE
Confidence 99999997621 11222222 222 33334433 233 67888888999999998876665554 34678999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
++.+|.++++++|+..|.+.+ ||++-+..
T Consensus 1201 i~idp~~~WlviGts~G~l~l-------------WDLRF~~~ 1229 (1431)
T KOG1240|consen 1201 IVIDPWCNWLVIGTSRGQLVL-------------WDLRFRVP 1229 (1431)
T ss_pred EEecCCceEEEEecCCceEEE-------------EEeecCce
Confidence 999999999999999999999 99997776
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.6e-12 Score=137.40 Aligned_cols=172 Identities=22% Similarity=0.334 Sum_probs=135.5
Q ss_pred eEEeccCCCcEEEEEEecC-CCCEEEEEeCCCeEEEEECCCCeeEE--EecCCC-CCeEEEEEcCCCCEEEEEEC----C
Q psy467 8 AEDFMAHGASVNCLALGKK-SGQVLATGGDDKKVNLWALGKSNCIM--SLSGHS-TPVESVQFGNGEETLSAGCQ----S 79 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~-dg~~LaTgs~DG~I~IWdl~t~~~i~--~l~~h~-~~V~sLafSpdg~~LaSgs~----D 79 (845)
++.|++|.+.++.+.|... ....+.+++.||+|++||+....... .+..+. .+-.|++.+..++.+++|+. +
T Consensus 63 l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~ 142 (376)
T KOG1188|consen 63 LEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSD 142 (376)
T ss_pred hheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCc
Confidence 5789999999999999763 56789999999999999997655443 334444 56778888778888888864 6
Q ss_pred CcEEEEECCCCcE-EEEE-cCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCc----eEEEEcCCCCCeEEEEEec
Q psy467 80 GSIKIWNLAVPTV-QRTL-NGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKG----CIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 80 GtV~VWDl~tg~~-v~~l-~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~----~l~~~~~h~~~V~sLafSP 152 (845)
-.|.+||++..++ +..+ ..|...|++++|+|.. +.|++|+.||.|.++|+.... ++..+ .+...|.++.|..
T Consensus 143 A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~vi-N~~sSI~~igw~~ 221 (376)
T KOG1188|consen 143 ASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVI-NHGSSIHLIGWLS 221 (376)
T ss_pred eEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhh-cccceeeeeeeec
Confidence 6799999998766 4443 5799999999999965 789999999999999996432 23333 4777899999997
Q ss_pred CC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC
Q psy467 153 DG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP 193 (845)
Q Consensus 153 dg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~ 193 (845)
++ +.|.+.+..+...+ |++..+.....+
T Consensus 222 ~~ykrI~clTH~Etf~~-------------~ele~~~~~~~~ 250 (376)
T KOG1188|consen 222 KKYKRIMCLTHMETFAI-------------YELEDGSEETWL 250 (376)
T ss_pred CCcceEEEEEccCceeE-------------EEccCCChhhcc
Confidence 76 45888888899999 999988764443
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-11 Score=136.04 Aligned_cols=245 Identities=15% Similarity=0.138 Sum_probs=159.2
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE----EEcCCCCCeEEEEE-----ccCCCEEEEEECCCeEEEEECC
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR----TLNGHKSSITSVDF-----HPYGDYLCSGSLDSFIKLWDLR 130 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~----~l~~h~~~V~~laf-----spdg~~Lasgs~DG~I~IWDl~ 130 (845)
.+....++-.|++|+.. ....+.+|+...+..+. ...-.....+|-+| .+.+--++.|-.-|.|.+.|..
T Consensus 125 ~~~~~~~~~~gd~lcFn-vg~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~ 203 (636)
T KOG2394|consen 125 IVTNTNQSGKGDRLCFN-VGRELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPI 203 (636)
T ss_pred ceeeccccCCCCEEEEe-cCCeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecch
Confidence 34455555567777654 35578888887432221 11101122334455 2355567888888999999876
Q ss_pred CCceEEEEc----CCCCCeEEEEEecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecC
Q psy467 131 RKGCIYTYR----GHSKSINSIRFSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSH 205 (845)
Q Consensus 131 t~~~l~~~~----~h~~~V~sLafSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~sp 205 (845)
..+..+.+. -....++|+.|-|. ...++++-.+|.+++ ||....... .......-+
T Consensus 204 ~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyl-------------y~~~~~~~~------t~p~~~~~k 264 (636)
T KOG2394|consen 204 NFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYL-------------YDKEIVCGA------TAPSYQALK 264 (636)
T ss_pred hhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEE-------------eeccccccC------CCCcccccC
Confidence 532221111 13467999999994 456777778899999 876321110 000111111
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
++............ ..++ .....+. ...|..++|+|
T Consensus 265 ~~~~f~i~t~ksk~-----------------------------~rNP-v~~w~~~--------------~g~in~f~FS~ 300 (636)
T KOG2394|consen 265 DGDQFAILTSKSKK-----------------------------TRNP-VARWHIG--------------EGSINEFAFSP 300 (636)
T ss_pred CCCeeEEeeeeccc-----------------------------cCCc-cceeEec--------------cccccceeEcC
Confidence 22212111110000 0000 0111111 23678889999
Q ss_pred CCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCC
Q psy467 286 QSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWG 364 (845)
Q Consensus 286 dg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~ 364 (845)
||+ +||+.+.||.++|||..+.+++..++..-+...|++|||||+||++|++|- |.||.+...+.+..-.+|.+
T Consensus 301 DG~-----~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkS 375 (636)
T KOG2394|consen 301 DGK-----YLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKS 375 (636)
T ss_pred CCc-----eEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEecccccc
Confidence 998 999999999999999999888877777778899999999999999999999 99999999999999999999
Q ss_pred CeEEEEEcC
Q psy467 365 KVQDLAVTG 373 (845)
Q Consensus 365 ~VtsVafSd 373 (845)
+|+.|+|.+
T Consensus 376 WVs~VaFDp 384 (636)
T KOG2394|consen 376 WVSVVAFDP 384 (636)
T ss_pred ceeeEeecc
Confidence 999999975
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.2e-11 Score=143.18 Aligned_cols=246 Identities=19% Similarity=0.309 Sum_probs=170.8
Q ss_pred CcEEEEEEec-CCCCEEEEEeCCCeEEEEEC-----CCCeeEEEecC-------CCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 16 ASVNCLALGK-KSGQVLATGGDDKKVNLWAL-----GKSNCIMSLSG-------HSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 16 ~~V~~LafSp-~dg~~LaTgs~DG~I~IWdl-----~t~~~i~~l~~-------h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
..|+.+.+-. ++..++++|+.||.|+||+- .+.+.+..+.+ ..+.=.-+.|.....+|++++.-..|
T Consensus 1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~I 1189 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSI 1189 (1387)
T ss_pred CccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEE
Confidence 5789998854 45678999999999999974 22334433322 11111445787766677777778999
Q ss_pred EEEECCCCcEEEEEcC-CCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCc---eEEEEcCCCCC--eEEEEEecCCC
Q psy467 83 KIWNLAVPTVQRTLNG-HKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKG---CIYTYRGHSKS--INSIRFSPDGQ 155 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~-h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~---~l~~~~~h~~~--V~sLafSPdg~ 155 (845)
+|||.....++..+.. ....|+++.-+. .|+.+++|..||.|++||.+... .+..++.|+.. |..+.+.+.|-
T Consensus 1190 RIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~ 1269 (1387)
T KOG1517|consen 1190 RIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGL 1269 (1387)
T ss_pred EEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCC
Confidence 9999998888777753 334466554433 46899999999999999997543 46677778877 99999998665
Q ss_pred E-EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 156 W-IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 156 ~-Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
- |++|+.||.|++ ||++...... ......|...
T Consensus 1270 ~elvSgs~~G~I~~-------------~DlR~~~~e~------------------~~~iv~~~~y--------------- 1303 (1387)
T KOG1517|consen 1270 GELVSGSQDGDIQL-------------LDLRMSSKET------------------FLTIVAHWEY--------------- 1303 (1387)
T ss_pred cceeeeccCCeEEE-------------EecccCcccc------------------cceeeecccc---------------
Confidence 4 999999999999 9998642200 0000011000
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
.+..+++..+++.. ++|+|+. +.|+||++.. +.
T Consensus 1304 ----------------------------------------Gs~lTal~VH~hap-----iiAsGs~-q~ikIy~~~G-~~ 1336 (1387)
T KOG1517|consen 1304 ----------------------------------------GSALTALTVHEHAP-----IIASGSA-QLIKIYSLSG-EQ 1336 (1387)
T ss_pred ----------------------------------------CccceeeeeccCCC-----eeeecCc-ceEEEEecCh-hh
Confidence 00134444444444 8999988 9999999873 44
Q ss_pred EEEecC-------CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc
Q psy467 315 VSTTEK-------NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 315 l~tl~g-------h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk 354 (845)
+..+.. ..+.+.|++|+|..-.||+|+.|. |.||..+.++
T Consensus 1337 l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1337 LNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred hcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence 433332 235689999999999999999999 9999876543
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.6e-11 Score=136.41 Aligned_cols=165 Identities=16% Similarity=0.121 Sum_probs=116.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeC---CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE-EECCC--c
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGD---DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA-GCQSG--S 81 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~---DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS-gs~DG--t 81 (845)
.+.+..|...+.+.+|+| +|+.|+..+. +..|.+|++.+++... +..+.....+++|+|||+.|+. .+.+| .
T Consensus 196 ~~~lt~~~~~v~~p~wSp-Dg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~ 273 (433)
T PRK04922 196 PQTILRSAEPILSPAWSP-DGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPE 273 (433)
T ss_pred ceEeecCCCccccccCCC-CCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCce
Confidence 356777888899999999 8998888763 3469999998776543 3334455668899999998764 44555 5
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC-CCe--EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL-DSF--IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~-DG~--I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
|.+||+.+++. ..+..+.......+|+|||++|+.++. +|. |.++|+.+++... +..+.......+|+|||++++
T Consensus 274 Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia 351 (433)
T PRK04922 274 IYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNARASVSPDGKKIA 351 (433)
T ss_pred EEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCccCEEECCCCCEEE
Confidence 99999998774 445545555677899999998887764 444 7777877665433 222333455789999999988
Q ss_pred EEeCCC---cEEEeeeeccCCceeEEEECCCCcc
Q psy467 159 SGGEDG---VVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 159 sgs~DG---~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
..+.++ .|.+ ||+.+++.
T Consensus 352 ~~~~~~~~~~I~v-------------~d~~~g~~ 372 (433)
T PRK04922 352 MVHGSGGQYRIAV-------------MDLSTGSV 372 (433)
T ss_pred EEECCCCceeEEE-------------EECCCCCe
Confidence 765433 3555 88876654
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.6e-10 Score=127.54 Aligned_cols=323 Identities=11% Similarity=0.123 Sum_probs=204.3
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-----CC-----CcEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-----QS-----GSIKI 84 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-----~D-----GtV~V 84 (845)
...++..++|+ +|+++|.+. +..+.|++...+..+.+.... .+.++.|+|.+++|.+-- .+ -.+.+
T Consensus 34 ~~~~~v~~~S~-~G~lfA~~~-~~~v~i~~~~~~~~~lt~~~~--~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v 109 (566)
T KOG2315|consen 34 SRPCNVFAYSN-NGRLFAYSD-NQVVKVFEIATLKVVLCVELK--KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLV 109 (566)
T ss_pred CCcceeEEEcC-CCcEEEEEc-CCeEEEEEccCCcEEEEeccc--eeeeeeecccccccccccccccccCCCCCCCceee
Confidence 34567788888 999888876 458999999888655554433 799999999999997631 12 34779
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCC--EEEE---
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ--WIAS--- 159 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~--~Las--- 159 (845)
|+++++.....+......-++..|+.|..+.+- -..+.+++|++.+.+.+. -+-|...|..+.+||.+. .+|+
T Consensus 110 ~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~ar-lv~nev~f~~~~~f~~~~-~kl~~~~i~~f~lSpgp~~~~vAvyvP 187 (566)
T KOG2315|consen 110 YNVETGVQRSQIQKKMQNGWVPQFSIDESLAAR-LVSNEVQFYDLGSFKTIQ-HKLSVSGITMLSLSPGPEPPFVAVYVP 187 (566)
T ss_pred eeeccceehhheehhhhcCcccccccchhhhhh-hhcceEEEEecCCcccee-eeeeccceeeEEecCCCCCceEEEEcc
Confidence 999996555555433223368999998764432 234679999997643332 223677899999999632 3433
Q ss_pred --EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC-----CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 160 --GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-----PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 160 --gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-----~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
.|.-+.+++ |............ ...-..+.|.+-|.-+..+.... ++.
T Consensus 188 e~kGaPa~vri-------------~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastd------------VDk 242 (566)
T KOG2315|consen 188 EKKGAPASVRI-------------YKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTD------------VDK 242 (566)
T ss_pred CCCCCCcEEEE-------------eccccccccchhhhccccccceeEEEeccCCceEEEEEEEe------------ecC
Confidence 244456777 7766322211111 11222344444454443332111 111
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
..... -++..+ .-+.+. |. ...-.+.-.++|.++.|+|+|+.+ .++.|-.-..+.|||++ +
T Consensus 243 tn~SY--YGEq~L---------yll~t~--g~--s~~V~L~k~GPVhdv~W~~s~~EF---~VvyGfMPAkvtifnlr-~ 303 (566)
T KOG2315|consen 243 TNASY--YGEQTL---------YLLATQ--GE--SVSVPLLKEGPVHDVTWSPSGREF---AVVYGFMPAKVTIFNLR-G 303 (566)
T ss_pred CCccc--cccceE---------EEEEec--Cc--eEEEecCCCCCceEEEECCCCCEE---EEEEecccceEEEEcCC-C
Confidence 00000 011110 111111 11 000011225789999999999854 45667778899999988 5
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC----EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-------
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG----LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR------- 380 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG----I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS------- 380 (845)
.++..+. .++-+++.|+|.|++|+.++-++ |-|||+.+-+++..+.... -+-..|+ ||+++.++
T Consensus 304 ~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlr 379 (566)
T KOG2315|consen 304 KPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLR 379 (566)
T ss_pred CEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEE
Confidence 6666665 56789999999999999888764 9999999988887776543 4557899 99999888
Q ss_pred ----EEEEeeCCCCC
Q psy467 381 ----VGTWSHQDSGF 391 (845)
Q Consensus 381 ----VsiW~~d~~~~ 391 (845)
+.+|...+..+
T Consensus 380 vdNg~KiwhytG~~l 394 (566)
T KOG2315|consen 380 VDNGIKIWHYTGSLL 394 (566)
T ss_pred ecCCeEEEEecCcee
Confidence 88998877643
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=3e-13 Score=155.22 Aligned_cols=236 Identities=21% Similarity=0.290 Sum_probs=175.6
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEE
Q psy467 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 49 ~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWD 128 (845)
+.++.+.+|...|+|+.|...|.++++|++|..|+||..+++.+.....+|.+.|+.++.+.++.++++++.|..|++|.
T Consensus 181 k~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWr 260 (1113)
T KOG0644|consen 181 KNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWR 260 (1113)
T ss_pred HHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEe
Confidence 34556678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 129 l~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
+.++.++..+.+|.+.|++++|+|-. +.+.||++++ ||.+-.-....+.+ ..++++
T Consensus 261 l~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~-------------wd~r~~~~~y~prp-------~~~~~~ 316 (1113)
T KOG0644|consen 261 LPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRI-------------WDARLEPRIYVPRP-------LKFTEK 316 (1113)
T ss_pred cCCCchHHHHhccccceeeeccCccc----cCCCCCceEe-------------ccccccccccCCCC-------CCcccc
Confidence 99999999999999999999999953 7789999999 98872111000000 000000
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSP 288 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~ 288 (845)
.. + ..+.|..++.
T Consensus 317 ---------~~-------~---------------------------~s~~~~~~~~------------------------ 329 (1113)
T KOG0644|consen 317 ---------DL-------V---------------------------DSILFENNGD------------------------ 329 (1113)
T ss_pred ---------cc-------e---------------------------eeeecccccc------------------------
Confidence 00 1 2233333443
Q ss_pred cccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEecCCCCCe
Q psy467 289 MLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKV 366 (845)
Q Consensus 289 ~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~V 366 (845)
-++||+.|+.-..|...... .+...+.-+.++.|- .+.+++-.+. +++|++-+|.+...+.+|...+
T Consensus 330 -----~f~Tgs~d~ea~n~e~~~l~------~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~ 398 (1113)
T KOG0644|consen 330 -----RFLTGSRDGEARNHEFEQLA------WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEV 398 (1113)
T ss_pred -----ccccccCCcccccchhhHhh------hhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccce
Confidence 67888888888887654321 122222222233222 4556666666 9999999999999999999999
Q ss_pred EEEEEc-CCceEEEE------EEEEee
Q psy467 367 QDLAVT-GTQLWFRR------VGTWSH 386 (845)
Q Consensus 367 tsVafS-dg~lLaaS------VsiW~~ 386 (845)
..+.++ =+..++.+ ..||.+
T Consensus 399 yvLd~Hpfn~ri~msag~dgst~iwdi 425 (1113)
T KOG0644|consen 399 YVLDVHPFNPRIAMSAGYDGSTIIWDI 425 (1113)
T ss_pred eeeeecCCCcHhhhhccCCCceEeeec
Confidence 999999 33334433 677753
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6e-11 Score=136.47 Aligned_cols=164 Identities=16% Similarity=0.136 Sum_probs=112.8
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCC---CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE-EECCCcEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDD---KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA-GCQSGSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~D---G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS-gs~DGtV~V 84 (845)
+.+..+...+.+.+|+| +|+.|+..+.+ ..|.+||+.+++... +......+.+.+|+|||+.|+. .+.+|...|
T Consensus 189 ~~l~~~~~~v~~p~wSP-DG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~I 266 (427)
T PRK02889 189 QSALSSPEPIISPAWSP-DGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQI 266 (427)
T ss_pred eEeccCCCCcccceEcC-CCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceE
Confidence 55677888999999999 88888877642 469999998886543 3334456678999999998874 566777666
Q ss_pred EE--CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC-CCeEEEEEC--CCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 85 WN--LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL-DSFIKLWDL--RRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 85 WD--l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~-DG~I~IWDl--~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
|. +.++. ...+..+........|+|||+.|+..+. +|...+|.+ .++... .+..........+|+|||++|+.
T Consensus 267 y~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~ 344 (427)
T PRK02889 267 YTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFTGSYNTSPRISPDGKLLAY 344 (427)
T ss_pred EEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEecCCCCcCceEECCCCCEEEE
Confidence 65 44444 4555555555677899999998876654 455556644 444432 22222233456789999999987
Q ss_pred EeCCC---cEEEeeeeccCCceeEEEECCCCcc
Q psy467 160 GGEDG---VVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 160 gs~DG---~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.+.++ .|.+ ||+.++..
T Consensus 345 ~s~~~g~~~I~v-------------~d~~~g~~ 364 (427)
T PRK02889 345 ISRVGGAFKLYV-------------QDLATGQV 364 (427)
T ss_pred EEccCCcEEEEE-------------EECCCCCe
Confidence 76554 3555 88876654
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.3e-09 Score=119.93 Aligned_cols=296 Identities=14% Similarity=0.188 Sum_probs=179.1
Q ss_pred EEEEeCC----CeEEEEEC--CCCeeE--EEecCCCCCeEEEEEcCCCCEEEEEEC----CCcEEEEECCCC--c--EEE
Q psy467 31 LATGGDD----KKVNLWAL--GKSNCI--MSLSGHSTPVESVQFGNGEETLSAGCQ----SGSIKIWNLAVP--T--VQR 94 (845)
Q Consensus 31 LaTgs~D----G~I~IWdl--~t~~~i--~~l~~h~~~V~sLafSpdg~~LaSgs~----DGtV~VWDl~tg--~--~v~ 94 (845)
+++|+.. +.|.+|++ ++++.. .... .......++++|++++|.+... ++.|..|++... + .+.
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~ 80 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN 80 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence 4455554 68888887 444432 2222 3445677899999999999877 478999988764 2 333
Q ss_pred EEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCC-CceEEE---Ec----------CCCCCeEEEEEecCCCEEEE
Q psy467 95 TLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRR-KGCIYT---YR----------GHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 95 ~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t-~~~l~~---~~----------~h~~~V~sLafSPdg~~Las 159 (845)
...........++++|++++|+++. .+|.|.++++.. +..... +. .......++.|+|||+++++
T Consensus 81 ~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v 160 (345)
T PF10282_consen 81 SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV 160 (345)
T ss_dssp EEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred eeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence 3432344556899999999998887 589999999976 333222 21 12345789999999999887
Q ss_pred EeC-CCcEEEeeeeccCCceeEEEECCCCc--c-----CCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 160 GGE-DGVVRIGASFHLTNTSIHVVDLSLVH--P-----LGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 160 gs~-DG~I~I~~~~~~~~~~I~vWDl~tg~--~-----l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
... ...|.+ |++.... . +........+.+.|+|+++.+......... +.+..+.
T Consensus 161 ~dlG~D~v~~-------------~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~-----v~v~~~~ 222 (345)
T PF10282_consen 161 PDLGADRVYV-------------YDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNT-----VSVFDYD 222 (345)
T ss_dssp EETTTTEEEE-------------EEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTE-----EEEEEEE
T ss_pred EecCCCEEEE-------------EEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCc-----EEEEeec
Confidence 653 335666 7765543 1 122335667899999999988877655444 1121111
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC-
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE- 310 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~- 310 (845)
..... .... ..+...|.+. ........++++|||+. ++++...++.|.+|+++
T Consensus 223 ~~~g~------~~~~--------~~~~~~~~~~--------~~~~~~~~i~ispdg~~----lyvsnr~~~sI~vf~~d~ 276 (345)
T PF10282_consen 223 PSDGS------LTEI--------QTISTLPEGF--------TGENAPAEIAISPDGRF----LYVSNRGSNSISVFDLDP 276 (345)
T ss_dssp TTTTE------EEEE--------EEEESCETTS--------CSSSSEEEEEE-TTSSE----EEEEECTTTEEEEEEECT
T ss_pred ccCCc------eeEE--------EEeeeccccc--------cccCCceeEEEecCCCE----EEEEeccCCEEEEEEEec
Confidence 00000 0000 0111111110 11125678899999983 45555567899999983
Q ss_pred -CC--eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC--EEEEEec--CCceEEEec-CCCCCeEEEEE
Q psy467 311 -KF--SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--LKVYGWE--PARQYDAQP-MGWGKVQDLAV 371 (845)
Q Consensus 311 -s~--~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--I~IWDl~--tgk~l~tl~-~h~~~VtsVaf 371 (845)
++ +.+..+.......+.++++|+|++|+++..+. |.+|+++ +|.+...-. ..-....+|.|
T Consensus 277 ~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 277 ATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp TTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred CCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 23 34444544445689999999999999998766 9999875 555443322 23345666665
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.7e-10 Score=130.09 Aligned_cols=234 Identities=19% Similarity=0.167 Sum_probs=148.7
Q ss_pred CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCE
Q psy467 38 KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS---GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY 114 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D---GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~ 114 (845)
..|.++|... ...+.+..+...+.+.+|+|||++|+.++.+ ..|.+||+.+++.... ..+...+.+++|+|||+.
T Consensus 170 ~~l~~~d~~g-~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~~~~~~~~~~spDg~~ 247 (417)
T TIGR02800 170 YELQVADYDG-ANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASFPGMNGAPAFSPDGSK 247 (417)
T ss_pred ceEEEEcCCC-CCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecCCCCccceEECCCCCE
Confidence 3588888754 3445565677789999999999999987654 4799999998865433 335556778999999987
Q ss_pred EEE-EECCC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 115 LCS-GSLDS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 115 Las-gs~DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
|+. .+.++ .|++||+.++.. ..+..+........|+|||++|+.++. ++...+ +++|+.+++.
T Consensus 248 l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~i-----------y~~d~~~~~~- 314 (417)
T TIGR02800 248 LAVSLSKDGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQI-----------YMMDADGGEV- 314 (417)
T ss_pred EEEEECCCCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceE-----------EEEECCCCCE-
Confidence 764 44444 589999987654 344444444567899999998876654 332222 2277654432
Q ss_pred CCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCc
Q psy467 191 GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGT 270 (845)
Q Consensus 191 ~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~ 270 (845)
. .+..+... . ....|+|++.
T Consensus 315 -------------------~-~l~~~~~~-------~---------------------------~~~~~spdg~------ 334 (417)
T TIGR02800 315 -------------------R-RLTFRGGY-------N---------------------------ASPSWSPDGD------ 334 (417)
T ss_pred -------------------E-EeecCCCC-------c---------------------------cCeEECCCCC------
Confidence 1 11101000 1 2334445444
Q ss_pred ccccccCceeEEEcCCCCcccceEEEEEeCCC---eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC---
Q psy467 271 CVPVSVSRTSLSILPQSPMLCFILTTSSSADR---TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--- 344 (845)
Q Consensus 271 ~~~~~~~I~slafSPdg~~~~~~lLatgs~DG---~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--- 344 (845)
+++.++.++ .|.+||+.++... .+... .......|+|||++|+.++.++
T Consensus 335 -----------------------~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~ 389 (417)
T TIGR02800 335 -----------------------LIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAPNGRMILYATTRGGRG 389 (417)
T ss_pred -----------------------EEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECCCCCEEEEEEeCCCcE
Confidence 777776665 7999999876543 23222 2345678999999988877654
Q ss_pred -EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 345 -LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 345 -I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
+.+.+. .++....+..+.+.+..++|+
T Consensus 390 ~l~~~~~-~g~~~~~~~~~~g~~~~~~ws 417 (417)
T TIGR02800 390 VLGLVST-DGRFRARLPLGNGDVREPAWS 417 (417)
T ss_pred EEEEEEC-CCceeeECCCCCCCcCCCCCC
Confidence 444443 345555565555666666664
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.2e-10 Score=130.07 Aligned_cols=276 Identities=14% Similarity=0.162 Sum_probs=190.6
Q ss_pred cCCCcEEEEEEecCCCCEE-EEEeCCCeEEEEECCCCeeEEEecCC--CCCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy467 13 AHGASVNCLALGKKSGQVL-ATGGDDKKVNLWALGKSNCIMSLSGH--STPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~L-aTgs~DG~I~IWdl~t~~~i~~l~~h--~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t 89 (845)
+|...-+.|..+| +|+|+ |||...-.|++||+....+. +..| ...|.-.-.+.|-..++.-..|.+|-+...-
T Consensus 49 e~p~ast~ik~s~-DGqY~lAtG~YKP~ikvydlanLSLK--FERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~- 124 (703)
T KOG2321|consen 49 EMPTASTRIKVSP-DGQYLLATGTYKPQIKVYDLANLSLK--FERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY- 124 (703)
T ss_pred CCccccceeEecC-CCcEEEEecccCCceEEEEcccceee--eeecccccceeEEEeccchhhheEeecCceeeehhhc-
Confidence 4788899999999 77765 56667779999999765433 3333 3455555556665666666678887765543
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~ 169 (845)
|. -..+. -......++++.-.--|+.++....|+-++++.|..+..+....+.++++..++...+|++|+.+|.|.+
T Consensus 125 G~-hy~~R-IP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEf- 201 (703)
T KOG2321|consen 125 GR-HYRTR-IPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEF- 201 (703)
T ss_pred Ce-eeeee-cCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEE-
Confidence 22 11111 1223456666654444556666677999999999999999988899999999999999999999999999
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
||.++... +..+..... |
T Consensus 202 ------------wDpR~ksr--------------------v~~l~~~~~--------v---------------------- 219 (703)
T KOG2321|consen 202 ------------WDPRDKSR--------------------VGTLDAASS--------V---------------------- 219 (703)
T ss_pred ------------ecchhhhh--------------------heeeecccc--------c----------------------
Confidence 99998776 332221111 0
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec-CCCCCEEEE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE-KNSSTIRRL 328 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~-gh~~~Vtsl 328 (845)
.-.|.+ .....|+++.|+.+|- .+++|..+|.|.|||++..+++..-. +...+|..+
T Consensus 220 --------~s~pg~---------~~~~svTal~F~d~gL-----~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l 277 (703)
T KOG2321|consen 220 --------NSHPGG---------DAAPSVTALKFRDDGL-----HVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKL 277 (703)
T ss_pred --------CCCccc---------cccCcceEEEecCCce-----eEEeeccCCcEEEEEcccCCceeecccCCccceeee
Confidence 000110 0113456666666654 89999999999999999988775544 235689999
Q ss_pred EEeCC--CCEEEEEeCCCEEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 329 TFSEG--GECLLGGDTEGLKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 329 afSpd--G~~Lasgs~DGI~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.|-+. +..|++....-++|||-.+|+....+... ..++++++- ++.+++++
T Consensus 278 ~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt-~~lND~C~~p~sGm~f~A 331 (703)
T KOG2321|consen 278 DWQDTDQQNKVVSMDKRILKIWDECTGKPMASIEPT-SDLNDFCFVPGSGMFFTA 331 (703)
T ss_pred cccccCCCceEEecchHHhhhcccccCCceeecccc-CCcCceeeecCCceEEEe
Confidence 99775 44455544333999999999988877644 449999998 66666655
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.6e-10 Score=131.61 Aligned_cols=152 Identities=14% Similarity=0.077 Sum_probs=113.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeC---CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEE-EEECCCc--
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGD---DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS-AGCQSGS-- 81 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~---DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGt-- 81 (845)
.+.+..|...|.+.+|+| +|+.|+..+. +..|.+||+.+++.. .+..+...+.+.+|+|||+.|+ +.+.++.
T Consensus 194 ~~~lt~~~~~v~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~ 271 (435)
T PRK05137 194 VRYLTDGSSLVLTPRFSP-NRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTD 271 (435)
T ss_pred cEEEecCCCCeEeeEECC-CCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCce
Confidence 467888889999999999 8888887753 468999999887653 4555667788999999999876 4445554
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC-CC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL-DS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~-DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
|.+||+.++.. ..+..+........|+|||+.|+..+. +| .|++||+..+.. ..+..+...+....|+|||++|+
T Consensus 272 Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~~~~~~~~SpdG~~ia 349 (435)
T PRK05137 272 IYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RRISFGGGRYSTPVWSPRGDLIA 349 (435)
T ss_pred EEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EEeecCCCcccCeEECCCCCEEE
Confidence 77889987765 445556666778999999998887763 33 688889876544 34433455567789999999998
Q ss_pred EEeCC
Q psy467 159 SGGED 163 (845)
Q Consensus 159 sgs~D 163 (845)
....+
T Consensus 350 ~~~~~ 354 (435)
T PRK05137 350 FTKQG 354 (435)
T ss_pred EEEcC
Confidence 77643
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.9e-10 Score=128.98 Aligned_cols=233 Identities=15% Similarity=0.099 Sum_probs=146.5
Q ss_pred eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE
Q psy467 39 KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS---GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115 (845)
Q Consensus 39 ~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D---GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L 115 (845)
.|.++|.+.++ .+.+..+...+...+|+|||+.|+..+.+ ..|.+||+.+++... +....+.+...+|+|||+.|
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~l 257 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKL 257 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEE
Confidence 47777876544 45555677889999999999999877643 369999999886543 33334455678999999988
Q ss_pred EE-EECCC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECCCCccCC
Q psy467 116 CS-GSLDS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLSLVHPLG 191 (845)
Q Consensus 116 as-gs~DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l~ 191 (845)
+. .+.+| .|++||+.++... .+..+........|+|||+.++..+. +|...+ +.+|+.+++.
T Consensus 258 a~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~i-----------y~~d~~~g~~-- 323 (430)
T PRK00178 258 AFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQI-----------YKVNVNGGRA-- 323 (430)
T ss_pred EEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceE-----------EEEECCCCCE--
Confidence 64 44454 6888899877643 45445555667899999998776653 333222 2267665543
Q ss_pred CCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcc
Q psy467 192 TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271 (845)
Q Consensus 192 ~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~ 271 (845)
.. +...... . ....
T Consensus 324 ------------------~~-lt~~~~~-------~---------------------------~~~~------------- 337 (430)
T PRK00178 324 ------------------ER-VTFVGNY-------N---------------------------ARPR------------- 337 (430)
T ss_pred ------------------EE-eecCCCC-------c---------------------------cceE-------------
Confidence 10 0000000 0 2233
Q ss_pred cccccCceeEEEcCCCCcccceEEEEEeC-CC--eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC----
Q psy467 272 VPVSVSRTSLSILPQSPMLCFILTTSSSA-DR--TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG---- 344 (845)
Q Consensus 272 ~~~~~~I~slafSPdg~~~~~~lLatgs~-DG--~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG---- 344 (845)
|+|||+ .++..+. ++ .|.+||+.+++....... .......|+|||++|+.++.++
T Consensus 338 -----------~Spdg~-----~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~--~~~~~p~~spdg~~i~~~~~~~g~~~ 399 (430)
T PRK00178 338 -----------LSADGK-----TLVMVHRQDGNFHVAAQDLQRGSVRILTDT--SLDESPSVAPNGTMLIYATRQQGRGV 399 (430)
T ss_pred -----------ECCCCC-----EEEEEEccCCceEEEEEECCCCCEEEccCC--CCCCCceECCCCCEEEEEEecCCceE
Confidence 444444 5555443 33 588999988765332222 2233568999999998776543
Q ss_pred EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 345 LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 345 I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
|.+++++ +.....+..+.+.+...+|+
T Consensus 400 l~~~~~~-g~~~~~l~~~~g~~~~p~ws 426 (430)
T PRK00178 400 LMLVSIN-GRVRLPLPTAQGEVREPSWS 426 (430)
T ss_pred EEEEECC-CCceEECcCCCCCcCCCccC
Confidence 6666664 34444555556667777776
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.6e-10 Score=126.87 Aligned_cols=311 Identities=13% Similarity=0.179 Sum_probs=196.1
Q ss_pred EEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC-----------CCcEEEEEC
Q psy467 19 NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ-----------SGSIKIWNL 87 (845)
Q Consensus 19 ~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~-----------DGtV~VWDl 87 (845)
+-+.||| -|.||+|-...| |.+|--++...++++. |. .|.-+.|||+.+||++-+. ...++|||+
T Consensus 214 tyv~wSP-~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI 289 (698)
T KOG2314|consen 214 TYVRWSP-KGTYLVTFHKQG-IALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDI 289 (698)
T ss_pred eeEEecC-CceEEEEEeccc-eeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEc
Confidence 5589999 999999998876 8899877777777776 55 4899999999999999653 257999999
Q ss_pred CCCcEEEEEcCCCC--Ce-EEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 88 AVPTVQRTLNGHKS--SI-TSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 88 ~tg~~v~~l~~h~~--~V-~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
.+|...+.|....+ .+ .-+.||.|++++|.-.. ..|.||+.....++-.-.-.-..|....|+|.++.||-=...-
T Consensus 290 ~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~ 368 (698)
T KOG2314|consen 290 ATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPET 368 (698)
T ss_pred cccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccc
Confidence 99998888865222 22 24689999999988776 4699999876544433233456788999999988887543210
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCc--ceeecCCCCeEEEE-ecCCCC---CccceeeEeeecccccccc
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTS--SVPFSHNTSLRKSF-TKGRPG---GTKAKIDVTRIEENAESED 238 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~--svs~spdg~~l~~~-~~h~~~---~~~~~i~V~~i~~~~~~~~ 238 (845)
......+.+..+.+++.+....-..+. .+-|..+|.+++.- ..|... +....++|..+.......+
T Consensus 369 --------~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve 440 (698)
T KOG2314|consen 369 --------NNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVE 440 (698)
T ss_pred --------cCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCce
Confidence 001122333666666665554444444 34566777776543 334433 2233455555544333222
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcC--------C----------CCcccc-----cccCceeEEEcCCCCcccceEE
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLN--------R----------SGTCVP-----VSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~--------~----------~~~~~~-----~~~~I~slafSPdg~~~~~~lL 295 (845)
.-.- ......++|.|.|... . ...... .....+.+.|+|.|++.+ ..
T Consensus 441 ~vel--------ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvv--va 510 (698)
T KOG2314|consen 441 VVEL--------KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVV--VA 510 (698)
T ss_pred eeec--------chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEE--EE
Confidence 2111 1122566777776521 0 000000 023446899999999422 22
Q ss_pred EEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC-------CEEEEEecC
Q psy467 296 TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-------GLKVYGWEP 352 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D-------GI~IWDl~t 352 (845)
+-+|..|.+.++|+....+..+-.......+.+.|.|.|+|+++++.- |-+||++..
T Consensus 511 ~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqG 574 (698)
T KOG2314|consen 511 ALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQG 574 (698)
T ss_pred EecccccceEEEecchhhhhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEeec
Confidence 223567899999998533332222222356889999999999998752 266777653
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-10 Score=119.00 Aligned_cols=157 Identities=17% Similarity=0.349 Sum_probs=111.4
Q ss_pred EEEEEecCCCCEEEEEeC----------CCeEEEEECC-CCeeEEEecC-CCCCeEEEEEcCCCCEEEEE--ECCCcEEE
Q psy467 19 NCLALGKKSGQVLATGGD----------DKKVNLWALG-KSNCIMSLSG-HSTPVESVQFGNGEETLSAG--CQSGSIKI 84 (845)
Q Consensus 19 ~~LafSp~dg~~LaTgs~----------DG~I~IWdl~-t~~~i~~l~~-h~~~V~sLafSpdg~~LaSg--s~DGtV~V 84 (845)
..+.|++ .|++|++-.. -|...+|.+. .......+.- ..++|.+++|+|+|+.||+. ..++.|.+
T Consensus 9 ~~~~W~~-~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~l 87 (194)
T PF08662_consen 9 AKLHWQP-SGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTL 87 (194)
T ss_pred EEEEecc-cCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence 4678998 8887775432 1335555552 2233444432 34579999999999987654 35679999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC---CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD---SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D---G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
||++ ++.+..+. ...+..+.|+|+|++|++++.+ |.|.+||+++.+.+.... | ..+..++|+|||++|+++.
T Consensus 88 yd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~ 162 (194)
T PF08662_consen 88 YDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-H-SDATDVEWSPDGRYLATAT 162 (194)
T ss_pred EcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-c-CcEEEEEEcCCCCEEEEEE
Confidence 9997 66777764 5677899999999999998744 679999999888887765 3 3478999999999999987
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.....++ +..+.+|+.. |+.
T Consensus 163 t~~r~~~-------dng~~Iw~~~-G~~ 182 (194)
T PF08662_consen 163 TSPRLRV-------DNGFKIWSFQ-GRL 182 (194)
T ss_pred eccceec-------cccEEEEEec-CeE
Confidence 5332222 2333448875 444
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-09 Score=120.50 Aligned_cols=322 Identities=14% Similarity=0.152 Sum_probs=211.0
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC--------------
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS-------------- 79 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D-------------- 79 (845)
-.-++..++||| .|.+|++.... .|.+|.-..+..+.++. | ..|..+.|+|.++||.+-+..
T Consensus 31 ~~~p~~~~~~SP-~G~~l~~~~~~-~V~~~~g~~~~~l~~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~ 106 (561)
T COG5354 31 ENWPVAYVSESP-LGTYLFSEHAA-GVECWGGPSKAKLVRFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTS 106 (561)
T ss_pred cCcchhheeecC-cchheehhhcc-ceEEccccchhheeeee-c-CCceecccCcccceeeeeccCCccChhhccCCccc
Confidence 345788999999 99999988766 48999987777565555 3 469999999999999996543
Q ss_pred -CcEEEEECCCCcEEEEEcCCCCC--eE-EEEEccCCCEEEEEECCCeEEEEECCCCce-EEEEcC-CCCCeEEEEEecC
Q psy467 80 -GSIKIWNLAVPTVQRTLNGHKSS--IT-SVDFHPYGDYLCSGSLDSFIKLWDLRRKGC-IYTYRG-HSKSINSIRFSPD 153 (845)
Q Consensus 80 -GtV~VWDl~tg~~v~~l~~h~~~--V~-~lafspdg~~Lasgs~DG~I~IWDl~t~~~-l~~~~~-h~~~V~sLafSPd 153 (845)
+.+.+||+.+|..+..+.....+ .+ -+.|+-+.+++|-. ....++|+++ ++.. ...++. ....|....|+|.
T Consensus 107 ~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~ 184 (561)
T COG5354 107 KNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPE 184 (561)
T ss_pred cCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhccccceeeEEecCC
Confidence 35999999999999998766555 55 67899888877655 3456999997 3322 111221 2356888899996
Q ss_pred CC--EEEE-----EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC--CCCCcceeecCCCCeEEEEec-CCCCCccc
Q psy467 154 GQ--WIAS-----GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP--PQYTSSVPFSHNTSLRKSFTK-GRPGGTKA 223 (845)
Q Consensus 154 g~--~Las-----gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~--~~~i~svs~spdg~~l~~~~~-h~~~~~~~ 223 (845)
++ .|+. .+.++.+++ |.+..+..+.+.. ...-..+.|.+.|+++..+.. |... ...
T Consensus 185 ~n~~~la~~tPEk~~kpa~~~i-------------~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ks-nKs 250 (561)
T COG5354 185 GNHDELAYWTPEKLNKPAMVRI-------------LSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKS-NKS 250 (561)
T ss_pred CCCceEEEEccccCCCCcEEEE-------------EEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeec-ccc
Confidence 43 3443 345667777 8888666544433 333445667777876655432 2211 000
Q ss_pred eeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccc-ccccCceeEEEcCCCCcccceEEEEEeCCC
Q psy467 224 KIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCV-PVSVSRTSLSILPQSPMLCFILTTSSSADR 302 (845)
Q Consensus 224 ~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~-~~~~~I~slafSPdg~~~~~~lLatgs~DG 302 (845)
-+ ++..+ ..+.+. ++ .-... ...++|..++|.|+++.+ -+++|-.+.
T Consensus 251 yf---------------gesnL---------yl~~~~--e~---~i~V~~~~~~pVhdf~W~p~S~~F---~vi~g~~pa 298 (561)
T COG5354 251 YF---------------GESNL---------YLLRIT--ER---SIPVEKDLKDPVHDFTWEPLSSRF---AVISGYMPA 298 (561)
T ss_pred ee---------------ccceE---------EEEeec--cc---ccceeccccccceeeeecccCCce---eEEeccccc
Confidence 00 00000 111111 11 00111 335788999999998843 355566888
Q ss_pred eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC----EEEEEecCCceE-EEecCCCCCeEEEEEc-CCce
Q psy467 303 TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG----LKVYGWEPARQY-DAQPMGWGKVQDLAVT-GTQL 376 (845)
Q Consensus 303 ~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG----I~IWDl~tgk~l-~tl~~h~~~VtsVafS-dg~l 376 (845)
.+.++|++.. ....+. ...=+.+.|||.+++++.++-|. +-+||....... ..+.+ ...+-+.|+ |+++
T Consensus 299 ~~s~~~lr~N-l~~~~P--e~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~--~n~s~~~wspd~qF 373 (561)
T COG5354 299 SVSVFDLRGN-LRFYFP--EQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG--LNTSYCDWSPDGQF 373 (561)
T ss_pred ceeecccccc-eEEecC--CcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeec--CCceEeeccCCceE
Confidence 9999999866 443333 34567788999999999988765 999997664333 24443 334456789 8888
Q ss_pred EEEE-----------EEEEeeCCCCCc
Q psy467 377 WFRR-----------VGTWSHQDSGFS 392 (845)
Q Consensus 377 LaaS-----------VsiW~~d~~~~~ 392 (845)
+.+. +.+|.+.+....
T Consensus 374 ~~~~~ts~k~~~Dn~i~l~~v~g~~~f 400 (561)
T COG5354 374 YDTDTTSEKLRVDNSIKLWDVYGAKVF 400 (561)
T ss_pred EEecCCCcccccCcceEEEEecCchhh
Confidence 8777 889988666554
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-10 Score=124.63 Aligned_cols=228 Identities=16% Similarity=0.211 Sum_probs=169.5
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe----eEEEecCCCCCeEEEEEcCCCC-EEEEEECC
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN----CIMSLSGHSTPVESVQFGNGEE-TLSAGCQS 79 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~----~i~~l~~h~~~V~sLafSpdg~-~LaSgs~D 79 (845)
+|.+.......++|..++.. + ..|++|-.+|.+.+|..+.+. .+..+..+ ..+..+.-++... .+++|+..
T Consensus 95 ~~~~~~~~l~~~~I~gl~~~--d-g~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke 170 (412)
T KOG3881|consen 95 LDDAKTVSLGTKSIKGLKLA--D-GTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKE 170 (412)
T ss_pred cccccccccccccccchhhc--C-CEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchh
Confidence 46667777778888888885 3 467788889999999987432 23333323 5577777777544 45568888
Q ss_pred --CcEEEEECCCCcEEEEEcCCC---------CCeEEEEEccC--CCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCe
Q psy467 80 --GSIKIWNLAVPTVQRTLNGHK---------SSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSI 145 (845)
Q Consensus 80 --GtV~VWDl~tg~~v~~l~~h~---------~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V 145 (845)
..+.+||++..+++.+-+.-. -.++++.|.+. ...|++++.-+.+++||.+.+ +++..+.-...++
T Consensus 171 ~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~i 250 (412)
T KOG3881|consen 171 NINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPI 250 (412)
T ss_pred cccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcc
Confidence 889999999886666544222 24678889887 789999999999999999865 5777887788899
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE-EecCCCCCccce
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS-FTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~-~~~h~~~~~~~~ 224 (845)
+++...|+++++++|..-|.+.. +|++.++. +.. +.+-.+.
T Consensus 251 s~~~l~p~gn~Iy~gn~~g~l~~-------------FD~r~~kl--------------------~g~~~kg~tGs----- 292 (412)
T KOG3881|consen 251 SSTGLTPSGNFIYTGNTKGQLAK-------------FDLRGGKL--------------------LGCGLKGITGS----- 292 (412)
T ss_pred eeeeecCCCcEEEEecccchhhe-------------ecccCcee--------------------eccccCCccCC-----
Confidence 99999999999999999999999 99998887 333 3443333
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ ..+..+|.+. ++++++-|..|
T Consensus 293 --i---------------------------rsih~hp~~~-----------------------------~las~GLDRyv 314 (412)
T KOG3881|consen 293 --I---------------------------RSIHCHPTHP-----------------------------VLASCGLDRYV 314 (412)
T ss_pred --c---------------------------ceEEEcCCCc-----------------------------eEEeeccceeE
Confidence 3 5555566555 99999999999
Q ss_pred EEEECCCCeEEEEecCCCCCEEEEEEeCC
Q psy467 305 NFWDLEKFSLVSTTEKNSSTIRRLTFSEG 333 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh~~~VtslafSpd 333 (845)
+|+|+.+.+++....- ....+++.+.++
T Consensus 315 RIhD~ktrkll~kvYv-Ks~lt~il~~~~ 342 (412)
T KOG3881|consen 315 RIHDIKTRKLLHKVYV-KSRLTFILLRDD 342 (412)
T ss_pred EEeecccchhhhhhhh-hccccEEEecCC
Confidence 9999999777655442 234566655443
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.7e-11 Score=131.12 Aligned_cols=267 Identities=15% Similarity=0.248 Sum_probs=186.4
Q ss_pred eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE-cCCCCCeEEEEEccC--CCEEEEEECCCeEEE
Q psy467 50 CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPY--GDYLCSGSLDSFIKL 126 (845)
Q Consensus 50 ~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l-~~h~~~V~~lafspd--g~~Lasgs~DG~I~I 126 (845)
+...+..|.+.|+.+.|+..|..|++|+.|..|.+||+..+.....+ .+|...|....|-|. ...+++++.||.+++
T Consensus 134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~ 213 (559)
T KOG1334|consen 134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV 213 (559)
T ss_pred hhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence 34567789999999999999999999999999999999998877766 579888988889884 368999999999998
Q ss_pred EECCC-CceE--EEEcCCCCCeEEEEEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCccee
Q psy467 127 WDLRR-KGCI--YTYRGHSKSINSIRFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202 (845)
Q Consensus 127 WDl~t-~~~l--~~~~~h~~~V~sLafSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs 202 (845)
=.+.. +.+. ..+..|.++|..++.-|+. .-|.+++.|+.+.- +|++++..-..
T Consensus 214 s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~-------------~Dlr~~~pa~~---------- 270 (559)
T KOG1334|consen 214 SEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFH-------------IDLRQDVPAEK---------- 270 (559)
T ss_pred eeeccccceecceecccccCccceeeecCCCCCcccccccccceee-------------eeeccCCccce----------
Confidence 87743 3332 3445699999999999965 45899999999998 89887766110
Q ss_pred ecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE
Q psy467 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282 (845)
Q Consensus 203 ~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla 282 (845)
+.+-..+.. ..+.. ..++..|...
T Consensus 271 -------~~cr~~~~~----~~v~L---------------------------~~Ia~~P~nt------------------ 294 (559)
T KOG1334|consen 271 -------FVCREADEK----ERVGL---------------------------YTIAVDPRNT------------------ 294 (559)
T ss_pred -------eeeeccCCc----cceee---------------------------eeEecCCCCc------------------
Confidence 111111110 01112 4445555443
Q ss_pred EcCCCCcccceEEEEEeCCCeEEEEECCCCe------EEEEecC------CCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 283 ILPQSPMLCFILTTSSSADRTVNFWDLEKFS------LVSTTEK------NSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 283 fSPdg~~~~~~lLatgs~DG~I~IWDl~s~~------~l~tl~g------h~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
+.+++|+.|..+++||.+.-. .+..+.. ....|++++|+.++.-|.++-.|- |+++.
T Consensus 295 ----------~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~ 364 (559)
T KOG1334|consen 295 ----------NEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFN 364 (559)
T ss_pred ----------cccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEec
Confidence 289999999999999986532 1222222 234699999998877666666665 99985
Q ss_pred ecC--C----------ceEEE-ecCCCC--CeEEEEEc--CCceEEEE-----EEEEee-----------CCCCCccccC
Q psy467 350 WEP--A----------RQYDA-QPMGWG--KVQDLAVT--GTQLWFRR-----VGTWSH-----------QDSGFSTLDS 396 (845)
Q Consensus 350 l~t--g----------k~l~t-l~~h~~--~VtsVafS--dg~lLaaS-----VsiW~~-----------d~~~~~~~~~ 396 (845)
-.. | ..+.. +++|.. .|-.+-|- ...+++.+ +.+|.. |.....-+.|
T Consensus 365 ~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEp 444 (559)
T KOG1334|consen 365 KSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEP 444 (559)
T ss_pred cccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCC
Confidence 432 2 22333 788874 58888888 35666655 999954 2223445566
Q ss_pred CCCCCCCCC
Q psy467 397 YSAGSPVST 405 (845)
Q Consensus 397 ~~~~~p~~~ 405 (845)
.|.-|-.++
T Consensus 445 HP~~PvLAs 453 (559)
T KOG1334|consen 445 HPHLPVLAS 453 (559)
T ss_pred CCCCchhhc
Confidence 665554444
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.2e-10 Score=117.35 Aligned_cols=197 Identities=19% Similarity=0.275 Sum_probs=133.7
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--------------EEEecCCCCCeEEEEEcCCCCEEEEEEC-C
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--------------IMSLSGHSTPVESVQFGNGEETLSAGCQ-S 79 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--------------i~~l~~h~~~V~sLafSpdg~~LaSgs~-D 79 (845)
...|+|++|-|..+..|++|+..| |.||....... +..-.+| .+|++++|++||..+++++- |
T Consensus 140 QrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gs 217 (445)
T KOG2139|consen 140 QRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGS 217 (445)
T ss_pred hcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCc
Confidence 457999999998888999998765 99998642111 1222345 68999999999999999876 6
Q ss_pred CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
..|.|||.+++..+.......+.+.-+.|+||+.+|++++-|+..++|+..............+.|...+|+|+|.+|+.
T Consensus 218 ssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf 297 (445)
T KOG2139|consen 218 SSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLF 297 (445)
T ss_pred ceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEE
Confidence 78999999998876665445677899999999999999999999999965433333333334568999999999998765
Q ss_pred EeCCCcEEEe-eeeccCCc----------eeEEEECCCCccC--CCCCCCCCcceeecCCCCeEEEEe
Q psy467 160 GGEDGVVRIG-ASFHLTNT----------SIHVVDLSLVHPL--GTPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 160 gs~DG~I~I~-~~~~~~~~----------~I~vWDl~tg~~l--~~~~~~~i~svs~spdg~~l~~~~ 214 (845)
++.. .-.++ ..|..... ...+-|+..-... ...--..+.+++|.|.|.+++..-
T Consensus 298 ~~sg-sp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~f 364 (445)
T KOG2139|consen 298 ACSG-SPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIF 364 (445)
T ss_pred EEcC-CceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEE
Confidence 5442 22331 11111111 1111222111000 011145677889999998887654
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.7e-09 Score=125.23 Aligned_cols=233 Identities=17% Similarity=0.137 Sum_probs=144.8
Q ss_pred eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE
Q psy467 39 KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS---GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115 (845)
Q Consensus 39 ~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D---GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L 115 (845)
.|.++|....+ .+.+..+...+.+..|+|||+.|+..+.+ ..|.+||+.+++... +....+.....+|+|||+.|
T Consensus 199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~L 276 (448)
T PRK04792 199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKL 276 (448)
T ss_pred EEEEEeCCCCC-ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEE
Confidence 57777865443 34555677889999999999999876543 358899998876533 32223334578999999987
Q ss_pred EE-EECCCe--EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECCCCccCC
Q psy467 116 CS-GSLDSF--IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLSLVHPLG 191 (845)
Q Consensus 116 as-gs~DG~--I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l~ 191 (845)
+. .+.+|. |.+||+.+++. ..+..+.......+|+|||++|+..+. ++...+ +++|+.+++.
T Consensus 277 a~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~I-----------y~~dl~~g~~-- 342 (448)
T PRK04792 277 ALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQI-----------YRVNLASGKV-- 342 (448)
T ss_pred EEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceE-----------EEEECCCCCE--
Confidence 65 455664 88889887654 344445555678899999998876653 343333 2366665443
Q ss_pred CCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcc
Q psy467 192 TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271 (845)
Q Consensus 192 ~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~ 271 (845)
.. +...... . ...
T Consensus 343 ------------------~~-Lt~~g~~-------~---------------------------~~~-------------- 355 (448)
T PRK04792 343 ------------------SR-LTFEGEQ-------N---------------------------LGG-------------- 355 (448)
T ss_pred ------------------EE-EecCCCC-------C---------------------------cCe--------------
Confidence 11 1000000 0 122
Q ss_pred cccccCceeEEEcCCCCcccceEEEEEeC-CC--eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC----
Q psy467 272 VPVSVSRTSLSILPQSPMLCFILTTSSSA-DR--TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG---- 344 (845)
Q Consensus 272 ~~~~~~I~slafSPdg~~~~~~lLatgs~-DG--~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG---- 344 (845)
+|+|||+ +++..+. ++ .|.++|+.+++... +... .......|+|||+.|+..+.++
T Consensus 356 ----------~~SpDG~-----~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~ 418 (448)
T PRK04792 356 ----------SITPDGR-----SMIMVNRTNGKFNIARQDLETGAMQV-LTST-RLDESPSVAPNGTMVIYSTTYQGKQV 418 (448)
T ss_pred ----------eECCCCC-----EEEEEEecCCceEEEEEECCCCCeEE-ccCC-CCCCCceECCCCCEEEEEEecCCceE
Confidence 4445554 4444433 34 46667888776533 3222 1223458999999988766543
Q ss_pred EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 345 LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 345 I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
+.+++. +|+....+..+.+.+...+|+
T Consensus 419 l~~~~~-~G~~~~~l~~~~g~~~~p~Ws 445 (448)
T PRK04792 419 LAAVSI-DGRFKARLPAGQGEVKSPAWS 445 (448)
T ss_pred EEEEEC-CCCceEECcCCCCCcCCCccC
Confidence 666676 566666676666777778876
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.3e-09 Score=112.95 Aligned_cols=234 Identities=16% Similarity=0.214 Sum_probs=155.8
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCC--eEEEEEcCCCCEEEE-EEC------CCcEEEEEC
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP--VESVQFGNGEETLSA-GCQ------SGSIKIWNL 87 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~--V~sLafSpdg~~LaS-gs~------DGtV~VWDl 87 (845)
...+++|+. |...+++|.++| .+||+.+--+....-+.+... +.-+-| -.++||. |+. -+.|.|||=
T Consensus 7 ~~lsvs~NQ-D~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWDD 82 (346)
T KOG2111|consen 7 KTLSVSFNQ-DHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWDD 82 (346)
T ss_pred ceeEEEEcc-CCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEec
Confidence 455699987 888888888776 899998653332222222222 222222 2345543 322 257999997
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC-CCceEEEEcCCC--CCeEEEEEecCCCEEEE-EeCC
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR-RKGCIYTYRGHS--KSINSIRFSPDGQWIAS-GGED 163 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~-t~~~l~~~~~h~--~~V~sLafSPdg~~Las-gs~D 163 (845)
...+++.++. ...+|.++.+.++ .|++.- ++.|.+|... +.+.++.+.... ..+.+++-..+..+||. |-.-
T Consensus 83 ~k~~~i~el~-f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~ 158 (346)
T KOG2111|consen 83 LKERCIIELS-FNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKT 158 (346)
T ss_pred ccCcEEEEEE-eccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCcc
Confidence 7778888887 6788999999865 455554 5789999987 445555554322 22333332223333333 2345
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
|.|++ -|+...+.- .-..+..|... |
T Consensus 159 GqvQi-------------~dL~~~~~~------------------~p~~I~AH~s~-------I---------------- 184 (346)
T KOG2111|consen 159 GQVQI-------------VDLASTKPN------------------APSIINAHDSD-------I---------------- 184 (346)
T ss_pred ceEEE-------------EEhhhcCcC------------------CceEEEcccCc-------e----------------
Confidence 66666 777654430 01334555555 5
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCe-EEEEECCCCeEEEEecC--
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT-VNFWDLEKFSLVSTTEK-- 320 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~-I~IWDl~s~~~l~tl~g-- 320 (845)
.+++.+.+|. ++||+|..|+ |+|||..+|+++.++..
T Consensus 185 -----------acv~Ln~~Gt-----------------------------~vATaStkGTLIRIFdt~~g~~l~E~RRG~ 224 (346)
T KOG2111|consen 185 -----------ACVALNLQGT-----------------------------LVATASTKGTLIRIFDTEDGTLLQELRRGV 224 (346)
T ss_pred -----------eEEEEcCCcc-----------------------------EEEEeccCcEEEEEEEcCCCcEeeeeecCC
Confidence 6666666666 9999999997 79999999999999884
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
....|.+++|||++.+||++++.| ++||.+..
T Consensus 225 d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 225 DRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred chheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 245799999999999999999999 99999875
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.1e-10 Score=119.90 Aligned_cols=259 Identities=15% Similarity=0.173 Sum_probs=180.8
Q ss_pred CCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEEEe------cCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 15 GASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSL------SGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 15 ~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l------~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
...|.+++|.-+... .+...+.+..+..+.+....+...+ .....+|..++.. ...|++|-.+|.+.+|..
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~~~ 132 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNLQVRHD 132 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCCcEEEEec
Confidence 456888888753223 3333336667777777665554433 3345667666654 346778888999999999
Q ss_pred CCCc----EEEEEcCCCCCeEEEEEccCCCE-EEEEECC--CeEEEEECCCCceEEEEcCCC---------CCeEEEEEe
Q psy467 88 AVPT----VQRTLNGHKSSITSVDFHPYGDY-LCSGSLD--SFIKLWDLRRKGCIYTYRGHS---------KSINSIRFS 151 (845)
Q Consensus 88 ~tg~----~v~~l~~h~~~V~~lafspdg~~-Lasgs~D--G~I~IWDl~t~~~l~~~~~h~---------~~V~sLafS 151 (845)
+.+. ....+..+ ..+..+.-++...+ +++|+.. ..+.+||+.+.+.+.+-+.-. -.++++.|-
T Consensus 133 k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl 211 (412)
T KOG3881|consen 133 KSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFL 211 (412)
T ss_pred cCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceec
Confidence 8543 23334333 34666666665554 5568888 789999999886665544321 134577888
Q ss_pred cC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEee
Q psy467 152 PD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229 (845)
Q Consensus 152 Pd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~ 229 (845)
+. ...||+++.-+.+++ ||.+.+.. .+..+.-.... +
T Consensus 212 ~g~~~~~fat~T~~hqvR~-------------YDt~~qRR-------------------PV~~fd~~E~~-------i-- 250 (412)
T KOG3881|consen 212 EGSPNYKFATITRYHQVRL-------------YDTRHQRR-------------------PVAQFDFLENP-------I-- 250 (412)
T ss_pred CCCCCceEEEEecceeEEE-------------ecCcccCc-------------------ceeEeccccCc-------c--
Confidence 76 788999999999999 99986554 13333332322 3
Q ss_pred ecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC
Q psy467 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 230 i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl 309 (845)
.++...|.+. ++.+|...|.+..||+
T Consensus 251 -------------------------s~~~l~p~gn-----------------------------~Iy~gn~~g~l~~FD~ 276 (412)
T KOG3881|consen 251 -------------------------SSTGLTPSGN-----------------------------FIYTGNTKGQLAKFDL 276 (412)
T ss_pred -------------------------eeeeecCCCc-----------------------------EEEEecccchhheecc
Confidence 4444555555 8999999999999999
Q ss_pred CCCeEEEE-ecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 310 EKFSLVST-TEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 310 ~s~~~l~t-l~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
+.++.... +.+..+.|+++..+|.+++||+++-|. |||+|+++.+++.... -...++.+.+.
T Consensus 277 r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvY-vKs~lt~il~~ 340 (412)
T KOG3881|consen 277 RGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVY-VKSRLTFILLR 340 (412)
T ss_pred cCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhh-hhccccEEEec
Confidence 99998777 888899999999999999999999999 9999999976654332 12345555554
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.2e-09 Score=112.33 Aligned_cols=154 Identities=20% Similarity=0.299 Sum_probs=102.8
Q ss_pred EEEEEccCCCEEEEEEC----------CCeEEEEECCC-CceEEEEcC-CCCCeEEEEEecCCCEEEEEe--CCCcEEEe
Q psy467 104 TSVDFHPYGDYLCSGSL----------DSFIKLWDLRR-KGCIYTYRG-HSKSINSIRFSPDGQWIASGG--EDGVVRIG 169 (845)
Q Consensus 104 ~~lafspdg~~Lasgs~----------DG~I~IWDl~t-~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs--~DG~I~I~ 169 (845)
..+.|+++|++|++-.. -|...+|.++. +.....+.- ..++|.+++|+|+|+.|++.. .++.+.+
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~l- 87 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTL- 87 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEE-
Confidence 46789999988765332 13345555522 233333332 345799999999999876553 5667888
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
||++ ++. +..+. ... +
T Consensus 88 ------------yd~~-~~~--------------------i~~~~--~~~-------~---------------------- 103 (194)
T PF08662_consen 88 ------------YDVK-GKK--------------------IFSFG--TQP-------R---------------------- 103 (194)
T ss_pred ------------EcCc-ccE--------------------eEeec--CCC-------c----------------------
Confidence 9986 333 33321 111 1
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC---CCeEEEEECCCCeEEEEecCCCCCEE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA---DRTVNFWDLEKFSLVSTTEKNSSTIR 326 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~---DG~I~IWDl~s~~~l~tl~gh~~~Vt 326 (845)
..+.|+|+|+ +|++++. .|.|.+||+++.+.+.+... ..++
T Consensus 104 -----n~i~wsP~G~-----------------------------~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~--~~~t 147 (194)
T PF08662_consen 104 -----NTISWSPDGR-----------------------------FLVLAGFGNLNGDLEFWDVRKKKKISTFEH--SDAT 147 (194)
T ss_pred -----eEEEECCCCC-----------------------------EEEEEEccCCCcEEEEEECCCCEEeecccc--CcEE
Confidence 3455555555 7887764 46799999999998877763 3579
Q ss_pred EEEEeCCCCEEEEEeC------CC-EEEEEecCCceEEEe
Q psy467 327 RLTFSEGGECLLGGDT------EG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 327 slafSpdG~~Lasgs~------DG-I~IWDl~tgk~l~tl 359 (845)
.++|||||++|++++. |+ ++||++. |+++...
T Consensus 148 ~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~ 186 (194)
T PF08662_consen 148 DVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYKK 186 (194)
T ss_pred EEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEec
Confidence 9999999999998864 44 9999985 5665443
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.3e-09 Score=122.08 Aligned_cols=152 Identities=13% Similarity=0.046 Sum_probs=106.6
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCC---CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE-EECCC--c
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDD---KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA-GCQSG--S 81 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~D---G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS-gs~DG--t 81 (845)
.+.+..|...+...+|+| +|+.|+..+.+ ..|.+|++.+++... +......+...+|+|||+.|+. .+.+| .
T Consensus 191 ~~~l~~~~~~~~~p~wSp-DG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~ 268 (430)
T PRK00178 191 AVTLLQSREPILSPRWSP-DGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPE 268 (430)
T ss_pred ceEEecCCCceeeeeECC-CCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCce
Confidence 355667788899999999 88888776543 369999998876543 3334445567899999998875 44444 5
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC-CC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL-DS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~-DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
|.+||+.+++.. .+..+........|+|||+.|+..+. +| .|+++|+.+++..... ..........|+|||++++
T Consensus 269 Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt-~~~~~~~~~~~Spdg~~i~ 346 (430)
T PRK00178 269 IYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVT-FVGNYNARPRLSADGKTLV 346 (430)
T ss_pred EEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee-cCCCCccceEECCCCCEEE
Confidence 888899987644 45545555677899999998876653 33 5888888777643322 1222344578999999988
Q ss_pred EEeCC
Q psy467 159 SGGED 163 (845)
Q Consensus 159 sgs~D 163 (845)
..+.+
T Consensus 347 ~~~~~ 351 (430)
T PRK00178 347 MVHRQ 351 (430)
T ss_pred EEEcc
Confidence 77643
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.5e-09 Score=120.96 Aligned_cols=157 Identities=17% Similarity=0.147 Sum_probs=113.5
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCC---CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE-ECCC--c
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDD---KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG-CQSG--S 81 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~D---G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg-s~DG--t 81 (845)
.+.+..+...+.+.+|+| +|++||.+..+ ..|++|++.+++... +..+...+.+++|+|||+.|+.. +.++ .
T Consensus 182 ~~~l~~~~~~~~~p~~Sp-dg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~ 259 (417)
T TIGR02800 182 PQTITRSREPILSPAWSP-DGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPD 259 (417)
T ss_pred CEEeecCCCceecccCCC-CCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCcc
Confidence 355667777899999999 89999887643 479999998876543 33455667789999999987654 3343 5
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC-C--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD-S--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D-G--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
|.+||+.++.. ..+..+........|+|||+.|+.++.. + .|.++|+.+++.. .+..+...+..+.|+|+|++++
T Consensus 260 i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~i~ 337 (417)
T TIGR02800 260 IYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGDLIA 337 (417)
T ss_pred EEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCCEEE
Confidence 88999987754 3444455555677999999988776543 3 6888888766543 3443455677889999999998
Q ss_pred EEeCCC---cEEE
Q psy467 159 SGGEDG---VVRI 168 (845)
Q Consensus 159 sgs~DG---~I~I 168 (845)
.++.++ .|.+
T Consensus 338 ~~~~~~~~~~i~~ 350 (417)
T TIGR02800 338 FVHREGGGFNIAV 350 (417)
T ss_pred EEEccCCceEEEE
Confidence 887765 4555
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.9e-09 Score=118.11 Aligned_cols=237 Identities=14% Similarity=0.098 Sum_probs=140.0
Q ss_pred CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEE---EEECC--CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCC
Q psy467 38 KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS---AGCQS--GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~La---Sgs~D--GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg 112 (845)
+.|.+.|.+.++ .+.+......+.+-+|+|||+.++ +...+ ..|.+.++.+++..... ...+.....+|+|||
T Consensus 165 ~~l~~~d~dG~~-~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt-~~~g~~~~p~wSPDG 242 (428)
T PRK01029 165 GELWSVDYDGQN-LRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL-ALQGNQLMPTFSPRK 242 (428)
T ss_pred ceEEEEcCCCCC-ceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEee-cCCCCccceEECCCC
Confidence 367777775544 444555666778889999997532 33333 35888898877643332 244455678999999
Q ss_pred CEEEEEEC-CC----eEEEEECCCC---ceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEE
Q psy467 113 DYLCSGSL-DS----FIKLWDLRRK---GCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVD 183 (845)
Q Consensus 113 ~~Lasgs~-DG----~I~IWDl~t~---~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWD 183 (845)
+.|+..+. +| .+..|++..+ ................+|+|||+.|+..+ .+|...+ ++++
T Consensus 243 ~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~l-----------y~~~ 311 (428)
T PRK01029 243 KLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRI-----------YIMQ 311 (428)
T ss_pred CEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceE-----------EEEE
Confidence 98876553 22 3444777642 32223322223446789999999887665 4565555 1133
Q ss_pred CCCC-ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCC
Q psy467 184 LSLV-HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPH 262 (845)
Q Consensus 184 l~tg-~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspd 262 (845)
+... .. ...+..+..
T Consensus 312 ~~~~g~~--------------------~~~lt~~~~-------------------------------------------- 327 (428)
T PRK01029 312 IDPEGQS--------------------PRLLTKKYR-------------------------------------------- 327 (428)
T ss_pred Ccccccc--------------------eEEeccCCC--------------------------------------------
Confidence 3211 11 011111000
Q ss_pred CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC---CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEE
Q psy467 263 RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD---RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG 339 (845)
Q Consensus 263 g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D---G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Las 339 (845)
.+...+|||||+ .|+..+.+ ..|.+||+.+++...... ....+....|+|||++|+.
T Consensus 328 --------------~~~~p~wSPDG~-----~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~-~~~~~~~p~wSpDG~~L~f 387 (428)
T PRK01029 328 --------------NSSCPAWSPDGK-----KIAFCSVIKGVRQICVYDLATGRDYQLTT-SPENKESPSWAIDSLHLVY 387 (428)
T ss_pred --------------CccceeECCCCC-----EEEEEEcCCCCcEEEEEECCCCCeEEccC-CCCCccceEECCCCCEEEE
Confidence 112344555555 55554432 479999999887654333 2345778999999998875
Q ss_pred EeC-CC---EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 340 GDT-EG---LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 340 gs~-DG---I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
... ++ |.+|++.+++..... ...+.+...+|+
T Consensus 388 ~~~~~g~~~L~~vdl~~g~~~~Lt-~~~g~~~~p~Ws 423 (428)
T PRK01029 388 SAGNSNESELYLISLITKKTRKIV-IGSGEKRFPSWG 423 (428)
T ss_pred EECCCCCceEEEEECCCCCEEEee-cCCCcccCceec
Confidence 543 22 888898887654433 344556777777
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-09 Score=131.12 Aligned_cols=224 Identities=15% Similarity=0.180 Sum_probs=153.5
Q ss_pred EECCCCeeEEEecCCCCCeEEEEEcCCC-CEEEEEECCCcEEEEECCCC-------cEEEEEcCCCCCeEEEEEccCCCE
Q psy467 43 WALGKSNCIMSLSGHSTPVESVQFGNGE-ETLSAGCQSGSIKIWNLAVP-------TVQRTLNGHKSSITSVDFHPYGDY 114 (845)
Q Consensus 43 Wdl~t~~~i~~l~~h~~~V~sLafSpdg-~~LaSgs~DGtV~VWDl~tg-------~~v~~l~~h~~~V~~lafspdg~~ 114 (845)
|+. .|..+..+..|...|..++.++.. .++++|+.||+|++||...- +...++......+.++.+.+.++.
T Consensus 1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCc-cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 664 577888888899999999998755 99999999999999998641 223344445678999999999999
Q ss_pred EEEEECCCeEEEEECCCC--c-----eEEEEcCC-CCCeEEE-EEec-CCC-EEEEEeCCCcEEEeeeeccCCceeEEEE
Q psy467 115 LCSGSLDSFIKLWDLRRK--G-----CIYTYRGH-SKSINSI-RFSP-DGQ-WIASGGEDGVVRIGASFHLTNTSIHVVD 183 (845)
Q Consensus 115 Lasgs~DG~I~IWDl~t~--~-----~l~~~~~h-~~~V~sL-afSP-dg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWD 183 (845)
+|+++.||.|++.++... . +.+....+ .+.+.+| +|.. ++. .++.+..-+.+.. ||
T Consensus 1113 ~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~-------------~D 1179 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVS-------------WD 1179 (1431)
T ss_pred EEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEE-------------ec
Confidence 999999999999998752 1 11111211 2233333 3332 222 5666666667777 99
Q ss_pred CCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCC
Q psy467 184 LSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHR 263 (845)
Q Consensus 184 l~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg 263 (845)
+++..... . +...+.
T Consensus 1180 ~r~~~~~w--------------------~--------------------------------------------lk~~~~- 1194 (1431)
T KOG1240|consen 1180 TRMRHDAW--------------------R--------------------------------------------LKNQLR- 1194 (1431)
T ss_pred chhhhhHH--------------------h--------------------------------------------hhcCcc-
Confidence 88655511 1 111110
Q ss_pred CcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec-CCCCCEEEEEEeCC---CCEEEE
Q psy467 264 SLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE-KNSSTIRRLTFSEG---GECLLG 339 (845)
Q Consensus 264 ~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~-gh~~~VtslafSpd---G~~Las 339 (845)
.+.|++++.+|.+. +++.|+..|.+.+||++=+.++..+. ++..+++.++.+|- ..+.++
T Consensus 1195 -----------hG~vTSi~idp~~~-----WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs 1258 (1431)
T KOG1240|consen 1195 -----------HGLVTSIVIDPWCN-----WLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVS 1258 (1431)
T ss_pred -----------ccceeEEEecCCce-----EEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEE
Confidence 12344444455444 99999999999999999888887776 34578888888774 346665
Q ss_pred EeC--CC-EEEEEecCCceEEEecC
Q psy467 340 GDT--EG-LKVYGWEPARQYDAQPM 361 (845)
Q Consensus 340 gs~--DG-I~IWDl~tgk~l~tl~~ 361 (845)
++. .+ |.+|++.+|.+..++..
T Consensus 1259 ~~~~~~nevs~wn~~~g~~~~vl~~ 1283 (1431)
T KOG1240|consen 1259 AGSSSNNEVSTWNMETGLRQTVLWA 1283 (1431)
T ss_pred ecccCCCceeeeecccCcceEEEEc
Confidence 555 44 99999999976666543
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.6e-09 Score=121.65 Aligned_cols=150 Identities=14% Similarity=0.112 Sum_probs=101.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeC-CC--eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE-EECCCc--E
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGD-DK--KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA-GCQSGS--I 82 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~-DG--~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS-gs~DGt--V 82 (845)
+.+..+...+.+..||| +|+.|+..+. ++ .|.+||+.+++... +..........+|+|||+.|+. .+.+|. |
T Consensus 211 ~~l~~~~~~~~~p~wSP-DG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~I 288 (448)
T PRK04792 211 QMLLRSPEPLMSPAWSP-DGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEI 288 (448)
T ss_pred eEeecCCCcccCceECC-CCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEE
Confidence 34555666788999999 8888887643 32 68889998776433 3322334457899999998875 455664 7
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC-CC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL-DS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~-DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
.+||+.+++. ..+..+.......+|+|||+.|+..+. ++ .|.++|+.+++... +..........+|+|||++|+.
T Consensus 289 y~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~~~~~~~~SpDG~~l~~ 366 (448)
T PRK04792 289 YVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGEQNLGGSITPDGRSMIM 366 (448)
T ss_pred EEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCCCCcCeeECCCCCEEEE
Confidence 8889887764 444445556678899999998876653 33 57777887766433 2212223345789999999877
Q ss_pred EeC
Q psy467 160 GGE 162 (845)
Q Consensus 160 gs~ 162 (845)
.+.
T Consensus 367 ~~~ 369 (448)
T PRK04792 367 VNR 369 (448)
T ss_pred EEe
Confidence 654
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.9e-08 Score=111.11 Aligned_cols=265 Identities=15% Similarity=0.192 Sum_probs=166.9
Q ss_pred EEEEECC----CcEEEEEC--CCCcEE--EEEcCCCCCeEEEEEccCCCEEEEEEC----CCeEEEEECCCC--c--eEE
Q psy467 73 LSAGCQS----GSIKIWNL--AVPTVQ--RTLNGHKSSITSVDFHPYGDYLCSGSL----DSFIKLWDLRRK--G--CIY 136 (845)
Q Consensus 73 LaSgs~D----GtV~VWDl--~tg~~v--~~l~~h~~~V~~lafspdg~~Lasgs~----DG~I~IWDl~t~--~--~l~ 136 (845)
+++|+.. +.|.+|++ ++++.. ..+. .......++++|++++|+++.. +|.|..|++... . .+.
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~ 80 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN 80 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence 4455554 68998888 444432 2222 3345677899999999998877 468999988654 3 333
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCC-ccCC---------------CCCCCCCc
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLV-HPLG---------------TPPPQYTS 199 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg-~~l~---------------~~~~~~i~ 199 (845)
...........++++|++++|+++. .+|.+.+ +++... .... ........
T Consensus 81 ~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v-------------~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H 147 (345)
T PF10282_consen 81 SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSV-------------FPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPH 147 (345)
T ss_dssp EEEESSSCEEEEEECTTSSEEEEEETTTTEEEE-------------EEECTTSEEEEEEEEEESEEEESSTTTTSSTCEE
T ss_pred eeccCCCCcEEEEEecCCCEEEEEEccCCeEEE-------------EEccCCcccceeeeecccCCCCCcccccccccce
Confidence 3433455677899999999988886 4788888 665542 1110 01134556
Q ss_pred ceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCC-cCC-CCcccccccC
Q psy467 200 SVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS-LNR-SGTCVPVSVS 277 (845)
Q Consensus 200 svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~-~~~-~~~~~~~~~~ 277 (845)
++.++|+++.+......... | ..+.+..... +.. .....+....
T Consensus 148 ~v~~~pdg~~v~v~dlG~D~-------v---------------------------~~~~~~~~~~~l~~~~~~~~~~G~G 193 (345)
T PF10282_consen 148 QVVFSPDGRFVYVPDLGADR-------V---------------------------YVYDIDDDTGKLTPVDSIKVPPGSG 193 (345)
T ss_dssp EEEE-TTSSEEEEEETTTTE-------E---------------------------EEEEE-TTS-TEEEEEEEECSTTSS
T ss_pred eEEECCCCCEEEEEecCCCE-------E---------------------------EEEEEeCCCceEEEeeccccccCCC
Confidence 88999999988776544433 3 2222222221 000 0001122345
Q ss_pred ceeEEEcCCCCcccceEEEEEeCCCeEEEEECC--CCe--EEEEecCC------CCCEEEEEEeCCCCEEEEEeCCC--E
Q psy467 278 RTSLSILPQSPMLCFILTTSSSADRTVNFWDLE--KFS--LVSTTEKN------SSTIRRLTFSEGGECLLGGDTEG--L 345 (845)
Q Consensus 278 I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~--s~~--~l~tl~gh------~~~VtslafSpdG~~Lasgs~DG--I 345 (845)
.+.++|+|+++. +.++...++.|.+|++. ++. .+..+... ......++++|||++|+++.... |
T Consensus 194 PRh~~f~pdg~~----~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI 269 (345)
T PF10282_consen 194 PRHLAFSPDGKY----AYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSI 269 (345)
T ss_dssp EEEEEE-TTSSE----EEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEE
T ss_pred CcEEEEcCCcCE----EEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEE
Confidence 678899999883 45566678899999988 443 33333311 22688999999999999987665 9
Q ss_pred EEEEec--CCc--eEEEecCCCCCeEEEEEc-CCceEEEE------EEEEeeCCC
Q psy467 346 KVYGWE--PAR--QYDAQPMGWGKVQDLAVT-GTQLWFRR------VGTWSHQDS 389 (845)
Q Consensus 346 ~IWDl~--tgk--~l~tl~~h~~~VtsVafS-dg~lLaaS------VsiW~~d~~ 389 (845)
.+|+++ +++ .+..+.......++++++ +|++|+++ |.+|.+|..
T Consensus 270 ~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~ 324 (345)
T PF10282_consen 270 SVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPD 324 (345)
T ss_dssp EEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETT
T ss_pred EEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCC
Confidence 999994 343 334455455668999999 99999988 888877633
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-08 Score=106.62 Aligned_cols=151 Identities=19% Similarity=0.363 Sum_probs=119.2
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC-CCeeEEEecCC--CCCeEEEEEcCCCCEEEE-EECCCcEEEEECCC
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALG-KSNCIMSLSGH--STPVESVQFGNGEETLSA-GCQSGSIKIWNLAV 89 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~-t~~~i~~l~~h--~~~V~sLafSpdg~~LaS-gs~DGtV~VWDl~t 89 (845)
...+|.++.+.+ +.+++.- .+.|.||... +.+.++.+... .....+++-+.+..+||. |-.-|+|+|-|+..
T Consensus 93 f~~~I~~V~l~r---~riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~ 168 (346)
T KOG2111|consen 93 FNSEIKAVKLRR---DRIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLAS 168 (346)
T ss_pred eccceeeEEEcC---CeEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhh
Confidence 567899999966 5666665 4589999986 55666655432 233444443334455555 44579999999987
Q ss_pred CcE--EEEEcCCCCCeEEEEEccCCCEEEEEECCCe-EEEEECCCCceEEEEcC--CCCCeEEEEEecCCCEEEEEeCCC
Q psy467 90 PTV--QRTLNGHKSSITSVDFHPYGDYLCSGSLDSF-IKLWDLRRKGCIYTYRG--HSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 90 g~~--v~~l~~h~~~V~~lafspdg~~Lasgs~DG~-I~IWDl~t~~~l~~~~~--h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
.+. ...+..|...|.|++.+.+|..+||+|..|+ |+|||..+|..+..++. ....|.||+|||+..+|++++..|
T Consensus 169 ~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKg 248 (346)
T KOG2111|consen 169 TKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKG 248 (346)
T ss_pred cCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCC
Confidence 655 4677889999999999999999999999997 79999999999999874 345799999999999999999999
Q ss_pred cEEE
Q psy467 165 VVRI 168 (845)
Q Consensus 165 ~I~I 168 (845)
++++
T Consensus 249 TlHi 252 (346)
T KOG2111|consen 249 TLHI 252 (346)
T ss_pred eEEE
Confidence 9999
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.6e-08 Score=106.43 Aligned_cols=275 Identities=10% Similarity=0.048 Sum_probs=159.0
Q ss_pred CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC----------CCcEEEEECCCCcEEEEEcCCCC------
Q psy467 38 KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ----------SGSIKIWNLAVPTVQRTLNGHKS------ 101 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~----------DGtV~VWDl~tg~~v~~l~~h~~------ 101 (845)
++|.+.|..+++.+..+..-..+- .+ ++||++.|+++.. +..|.+||..+++.+..+.....
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 799999999999988887443333 34 9999998877765 78999999999999988874222
Q ss_pred -CeEEEEEccCCCEEEEEE-C-CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCC--
Q psy467 102 -SITSVDFHPYGDYLCSGS-L-DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN-- 176 (845)
Q Consensus 102 -~V~~lafspdg~~Lasgs-~-DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~-- 176 (845)
.-..++++|||+++++.. . +..|.+.|+.+++.+..+.- .+...-+..+.+..+ + -+.||..... .+...+
T Consensus 105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v-p~~~~vy~t~e~~~~-~-~~~Dg~~~~v-~~d~~g~~ 180 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV-PDCYHIFPTANDTFF-M-HCRDGSLAKV-GYGTKGNP 180 (352)
T ss_pred CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC-CCCcEEEEecCCccE-E-EeecCceEEE-EecCCCce
Confidence 234789999999998776 3 68999999999999888764 222222222222221 1 1223332220 000000
Q ss_pred --ceeEEEECCCCccCCCCCCCCCcceeecC-CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCC
Q psy467 177 --TSIHVVDLSLVHPLGTPPPQYTSSVPFSH-NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253 (845)
Q Consensus 177 --~~I~vWDl~tg~~l~~~~~~~i~svs~sp-dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~ 253 (845)
....+++... ..+ ..+- .+.+ +|+.+..-.. +. |..++........ ...+.......
T Consensus 181 ~~~~~~vf~~~~-~~v------~~rP-~~~~~dg~~~~vs~e--G~-------V~~id~~~~~~~~---~~~~~~~~~~~ 240 (352)
T TIGR02658 181 KIKPTEVFHPED-EYL------INHP-AYSNKSGRLVWPTYT--GK-------IFQIDLSSGDAKF---LPAIEAFTEAE 240 (352)
T ss_pred EEeeeeeecCCc-ccc------ccCC-ceEcCCCcEEEEecC--Ce-------EEEEecCCCccee---cceeeeccccc
Confidence 0011111110 000 0000 2233 5554433211 22 2112110000000 00000000000
Q ss_pred ceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe----------CCCeEEEEECCCCeEEEEecCCCC
Q psy467 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS----------ADRTVNFWDLEKFSLVSTTEKNSS 323 (845)
Q Consensus 254 ~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs----------~DG~I~IWDl~s~~~l~tl~gh~~ 323 (845)
..-.|.|.+ ..-++++++++ .+.+.. ..+.|.++|..+++.+..+.. ..
T Consensus 241 -~~~~wrP~g--------------~q~ia~~~dg~-----~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~ 299 (352)
T TIGR02658 241 -KADGWRPGG--------------WQQVAYHRARD-----RIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GH 299 (352)
T ss_pred -cccccCCCc--------------ceeEEEcCCCC-----EEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CC
Confidence 000122322 23488999888 444421 125899999999999998874 45
Q ss_pred CEEEEEEeCCCC-EEEEEeC-CC-EEEEEecCCceEEEe
Q psy467 324 TIRRLTFSEGGE-CLLGGDT-EG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 324 ~VtslafSpdG~-~Lasgs~-DG-I~IWDl~tgk~l~tl 359 (845)
.+..++++|||+ .|++... ++ |.++|..+++.+.++
T Consensus 300 ~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 300 EIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred ceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 799999999999 7777764 55 999999999999887
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.4e-09 Score=123.43 Aligned_cols=286 Identities=14% Similarity=0.145 Sum_probs=192.7
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe---------------eEEEecCCCCCeEEEEEcCCCCEEEEEEC
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN---------------CIMSLSGHSTPVESVQFGNGEETLSAGCQ 78 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~---------------~i~~l~~h~~~V~sLafSpdg~~LaSgs~ 78 (845)
......|+.|+. ...++|+||.||.+++-.+.+.. .-+++.||+..|..+.|+.+.+.|-+...
T Consensus 13 nnvkL~c~~WNk-e~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt 91 (1189)
T KOG2041|consen 13 NNVKLHCAEWNK-ESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT 91 (1189)
T ss_pred CCceEEEEEEcc-cCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence 345688999998 88899999999999999875421 23567899999999999999999999999
Q ss_pred CCcEEEEECCCCcEEEEE--cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCE
Q psy467 79 SGSIKIWNLAVPTVQRTL--NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 79 DGtV~VWDl~tg~~v~~l--~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
+|.|.||-+-.|.....+ ...++-|.+++|+.||..++....||.|.+=.+.. ..+..-.-.......+.|++|.+.
T Consensus 92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdG-NRIwgKeLkg~~l~hv~ws~D~~~ 170 (1189)
T KOG2041|consen 92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDG-NRIWGKELKGQLLAHVLWSEDLEQ 170 (1189)
T ss_pred CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecc-ceecchhcchheccceeecccHHH
Confidence 999999999877544333 22456789999999999999999999998887763 333322222334557899999988
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
++.+-.+|.+.+ ||....-....... ......+.... ....+
T Consensus 171 ~Lf~~ange~hl-------------ydnqgnF~~Kl~~~-------------c~Vn~tg~~s~---~~~ki--------- 212 (1189)
T KOG2041|consen 171 ALFKKANGETHL-------------YDNQGNFERKLEKD-------------CEVNGTGIFSN---FPTKI--------- 212 (1189)
T ss_pred HHhhhcCCcEEE-------------ecccccHHHhhhhc-------------eEEeeeeeecC---CCccc---------
Confidence 888888888888 88653221000000 00000000000 00001
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~ 316 (845)
..+.|..... ...-||.. .|+++..+|.+.|..-.+...-.
T Consensus 213 ------------------a~i~w~~g~~----------------~~v~pdrP-----~lavcy~nGr~QiMR~eND~~Pv 253 (1189)
T KOG2041|consen 213 ------------------AEIEWNTGPY----------------QPVPPDRP-----RLAVCYANGRMQIMRSENDPEPV 253 (1189)
T ss_pred ------------------cceeeccCcc----------------ccCCCCCC-----EEEEEEcCceehhhhhcCCCCCe
Confidence 1222221110 01123444 88999999998887544332222
Q ss_pred EecCCCCCEEEEEEeCCCCEEEEEeCCC----------EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 317 TTEKNSSTIRRLTFSEGGECLLGGDTEG----------LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 317 tl~gh~~~VtslafSpdG~~Lasgs~DG----------I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.+.. ...+....|+++|.+||+++.+. |++|. .-|+.+.+++.....|++++|- .|-.||.+
T Consensus 254 v~dt-gm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G~i~gtlkvpg~~It~lsWEg~gLriA~A 326 (1189)
T KOG2041|consen 254 VVDT-GMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-PYGHIVGTLKVPGSCITGLSWEGTGLRIAIA 326 (1189)
T ss_pred EEec-ccEeecceecCCCcEEEEccCcccccCccccceEEEec-cchhheEEEecCCceeeeeEEcCCceEEEEE
Confidence 2221 25688999999999999987642 44433 3467888999889999999999 77777776
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.9e-09 Score=116.19 Aligned_cols=187 Identities=19% Similarity=0.235 Sum_probs=147.6
Q ss_pred CCCCEEEEEECCCcEEEEECCCCcEEEEEcC---CCCCeEEEEEc------c--------------CCCEEEEEECCCeE
Q psy467 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNG---HKSSITSVDFH------P--------------YGDYLCSGSLDSFI 124 (845)
Q Consensus 68 pdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~---h~~~V~~lafs------p--------------dg~~Lasgs~DG~I 124 (845)
|...++|....||.+++|+...+++...|.. -.+..++..|. | +...++-|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 4567899999999999999999988777742 23445555552 1 23467778899999
Q ss_pred EEEECCCCceEEEEc--CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCccee
Q psy467 125 KLWDLRRKGCIYTYR--GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~--~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs 202 (845)
.+|++..++....+. .|.+.|.++.++.+-..|.+++.|+.+.. |+...+..
T Consensus 83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~-------------~~~~~~~~------------- 136 (541)
T KOG4547|consen 83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVY-------------ILEKEKVI------------- 136 (541)
T ss_pred EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEE-------------Eeccccee-------------
Confidence 999999999888876 58899999999998889999999999999 99887776
Q ss_pred ecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE
Q psy467 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282 (845)
Q Consensus 203 ~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla 282 (845)
+..+...... + .+++++||+.
T Consensus 137 -------~~~~~~~~~~-------~---------------------------~sl~is~D~~------------------ 157 (541)
T KOG4547|consen 137 -------IRIWKEQKPL-------V---------------------------SSLCISPDGK------------------ 157 (541)
T ss_pred -------eeeeccCCCc-------c---------------------------ceEEEcCCCC------------------
Confidence 5555444333 3 5566666655
Q ss_pred EcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCC-----CCEEEEEeCCC--EEEEEecC
Q psy467 283 ILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEG-----GECLLGGDTEG--LKVYGWEP 352 (845)
Q Consensus 283 fSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpd-----G~~Lasgs~DG--I~IWDl~t 352 (845)
.+++++ +.|++||+++++.+.+|.||.++|+++.|..+ |.++.++..-. +.+|-.+.
T Consensus 158 -----------~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 158 -----------ILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred -----------EEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 888875 68999999999999999999999999999887 77777654433 88898765
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.6e-08 Score=116.32 Aligned_cols=166 Identities=17% Similarity=0.098 Sum_probs=105.5
Q ss_pred EEeccCCCcEEEEEEecCCCCE---EEEEeCCC--eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC-CC--
Q psy467 9 EDFMAHGASVNCLALGKKSGQV---LATGGDDK--KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ-SG-- 80 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~---LaTgs~DG--~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~-DG-- 80 (845)
+.|..+...+.+-+||| +|+. +++...+| .|.+.++.+++... +....+.....+|||||+.|+..+. +|
T Consensus 178 ~~lt~~~~~~~sP~wSP-DG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~ 255 (428)
T PRK01029 178 RPLTQEHSLSITPTWMH-IGSGFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMPTFSPRKKLLAFISDRYGNP 255 (428)
T ss_pred eEcccCCCCcccceEcc-CCCceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccceEECCCCCEEEEEECCCCCc
Confidence 45666667778889999 7764 23444444 57777887765433 3334455667899999999887653 22
Q ss_pred --cEEEEECCCC---cEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEE--ECCC-CceEEEEcCCCCCeEEEEEe
Q psy467 81 --SIKIWNLAVP---TVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLW--DLRR-KGCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 81 --tV~VWDl~tg---~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IW--Dl~t-~~~l~~~~~h~~~V~sLafS 151 (845)
.+.+|++..+ ........+.......+|+|||+.|+..+ .+|...+| ++.. +.....+..+...+....|+
T Consensus 256 di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wS 335 (428)
T PRK01029 256 DLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWS 335 (428)
T ss_pred ceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeEC
Confidence 3445777653 33333333333456789999999887665 45654444 5432 23344455455567789999
Q ss_pred cCCCEEEEEeCC-C--cEEEeeeeccCCceeEEEECCCCcc
Q psy467 152 PDGQWIASGGED-G--VVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 152 Pdg~~Lasgs~D-G--~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
|||++|+..+.+ | .|.+ ||+.+++.
T Consensus 336 PDG~~Laf~~~~~g~~~I~v-------------~dl~~g~~ 363 (428)
T PRK01029 336 PDGKKIAFCSVIKGVRQICV-------------YDLATGRD 363 (428)
T ss_pred CCCCEEEEEEcCCCCcEEEE-------------EECCCCCe
Confidence 999998876543 2 3444 88877665
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.3e-07 Score=100.05 Aligned_cols=290 Identities=12% Similarity=0.158 Sum_probs=179.3
Q ss_pred CCeEEEEECCCCe--e-EEEecCCCCCeEEEEEcCCCCEEEEEEC---CCcEEEEECCC--CcEE--EEEcCCCCCeEEE
Q psy467 37 DKKVNLWALGKSN--C-IMSLSGHSTPVESVQFGNGEETLSAGCQ---SGSIKIWNLAV--PTVQ--RTLNGHKSSITSV 106 (845)
Q Consensus 37 DG~I~IWdl~t~~--~-i~~l~~h~~~V~sLafSpdg~~LaSgs~---DGtV~VWDl~t--g~~v--~~l~~h~~~V~~l 106 (845)
+.-|++|++.+.. . ...+-.+...++-|+|+|+++.|.++.. +|.|..|.++. |+.. ........+-+.+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 4569999987322 1 1122346778899999999999988765 47788887774 4432 2222223344789
Q ss_pred EEccCCCEEEEEEC-CCeEEEEECCC-CceEE--EEcCCCCC----------eEEEEEecCCCEEEEEeC-CCcEEEeee
Q psy467 107 DFHPYGDYLCSGSL-DSFIKLWDLRR-KGCIY--TYRGHSKS----------INSIRFSPDGQWIASGGE-DGVVRIGAS 171 (845)
Q Consensus 107 afspdg~~Lasgs~-DG~I~IWDl~t-~~~l~--~~~~h~~~----------V~sLafSPdg~~Lasgs~-DG~I~I~~~ 171 (845)
+++++|++++++.. .|.|.++-+++ |.... ....|.+. +....+.|++++|++.+- ...|.+
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~--- 171 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFL--- 171 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEE---
Confidence 99999999988764 57899999865 33211 12224444 788999999999988753 225666
Q ss_pred eccCCceeEEEECCCCccCCC-----CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 172 FHLTNTSIHVVDLSLVHPLGT-----PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 172 ~~~~~~~I~vWDl~tg~~l~~-----~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
|++..|+.... .+....+.+.|+|++++...+..-... +.++...... ++.+.+
T Consensus 172 ----------y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~st-----V~v~~y~~~~------g~~~~l 230 (346)
T COG2706 172 ----------YDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNST-----VDVLEYNPAV------GKFEEL 230 (346)
T ss_pred ----------EEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCE-----EEEEEEcCCC------ceEEEe
Confidence 88887665322 235678899999999988776544333 2232222110 000000
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCC--CeE--EEEecCC
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEK--FSL--VSTTEKN 321 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s--~~~--l~tl~gh 321 (845)
..+..-|.+. .-..+..++.+++||+ +|.++. ....|.+|.+.. +++ +.....+
T Consensus 231 --------Q~i~tlP~dF--------~g~~~~aaIhis~dGr-----FLYasNRg~dsI~~f~V~~~~g~L~~~~~~~te 289 (346)
T COG2706 231 --------QTIDTLPEDF--------TGTNWAAAIHISPDGR-----FLYASNRGHDSIAVFSVDPDGGKLELVGITPTE 289 (346)
T ss_pred --------eeeccCcccc--------CCCCceeEEEECCCCC-----EEEEecCCCCeEEEEEEcCCCCEEEEEEEeccC
Confidence 1111112211 2234567888999999 555543 345788887653 332 2333345
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCC--EEEEEec--CCceEEEec-CCCCCeEEEEE
Q psy467 322 SSTIRRLTFSEGGECLLGGDTEG--LKVYGWE--PARQYDAQP-MGWGKVQDLAV 371 (845)
Q Consensus 322 ~~~VtslafSpdG~~Lasgs~DG--I~IWDl~--tgk~l~tl~-~h~~~VtsVaf 371 (845)
...-+...|+++|++|+++..++ |.+|..+ +|++..... .......+|.|
T Consensus 290 g~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f 344 (346)
T COG2706 290 GQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKF 344 (346)
T ss_pred CcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEE
Confidence 55678999999999999999988 9998776 454433322 23344555555
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.2e-08 Score=117.49 Aligned_cols=369 Identities=15% Similarity=0.172 Sum_probs=226.5
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCC------------CCEEEEEECCCc
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG------------EETLSAGCQSGS 81 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpd------------g~~LaSgs~DGt 81 (845)
|...-.++.|+| +.++|.|+.. .|.+-|..+-+.+..+..|...|+.+.|.|- .-.||++...|.
T Consensus 14 ~~sN~~A~Dw~~--~GLiAygshs-lV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~Gr 90 (1062)
T KOG1912|consen 14 SRSNRNAADWSP--SGLIAYGSHS-LVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGR 90 (1062)
T ss_pred CcccccccccCc--cceEEEecCc-eEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCc
Confidence 344567889998 4477777754 7889999999999999999999999999872 124677777899
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEcc---CC-CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec-CCCE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHP---YG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP-DGQW 156 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafsp---dg-~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP-dg~~ 156 (845)
|.+||...+..+..+..|..++..++|-+ +. ..|++-.....|.+|+..+|+....+........|+.+.| |.+.
T Consensus 91 Iil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh 170 (1062)
T KOG1912|consen 91 IILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRH 170 (1062)
T ss_pred EEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcce
Confidence 99999999999999998999999999976 33 4666777778999999999999999887777778899988 6666
Q ss_pred EEEEeCCCcEEEeeee-------------------------------------------------------------ccC
Q psy467 157 IASGGEDGVVRIGASF-------------------------------------------------------------HLT 175 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~-------------------------------------------------------------~~~ 175 (845)
+...+..|.+.+.... -.-
T Consensus 171 ~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~ 250 (1062)
T KOG1912|consen 171 FCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITF 250 (1062)
T ss_pred EEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEe
Confidence 6666666665551111 011
Q ss_pred CceeEEEECCCCccCCCCC--CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc--------------
Q psy467 176 NTSIHVVDLSLVHPLGTPP--PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ-------------- 239 (845)
Q Consensus 176 ~~~I~vWDl~tg~~l~~~~--~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~-------------- 239 (845)
+..+.++|++-..++...+ ...+.-+.+-|+++.-..+..|..+ .+.+|.-...+.....
T Consensus 251 prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG----~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~ 326 (1062)
T KOG1912|consen 251 PRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNG----RLTIRVRKEEPTEFKKPNASLSMDLGEQVH 326 (1062)
T ss_pred ccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCC----eEEEEEeeccCccccccchhhccccccceE
Confidence 2234444444333332222 3344455556666555555555544 1222211111110000
Q ss_pred ----------------------------ccchhhhhhccC--CCceeE-------EEcCCCC--cCCCCcc------ccc
Q psy467 240 ----------------------------AGEEELFATIAN--PCDYSA-------IFQPHRS--LNRSGTC------VPV 274 (845)
Q Consensus 240 ----------------------------~~~~~l~~~~~~--~~~~~l-------~fspdg~--~~~~~~~------~~~ 274 (845)
.+...+|....+ +..... .|+-++. ....... -.+
T Consensus 327 ~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h 406 (1062)
T KOG1912|consen 327 VVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSH 406 (1062)
T ss_pred EEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCC
Confidence 001111110000 000000 0000000 0000000 001
Q ss_pred ccCceeEE-----------EcCCCCccc--ceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEe
Q psy467 275 SVSRTSLS-----------ILPQSPMLC--FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGD 341 (845)
Q Consensus 275 ~~~I~sla-----------fSPdg~~~~--~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs 341 (845)
..+.++.. -.|.|+... ..++|.|...|+|.++|+.++..-..+..|.+.|.++.|--..+++-.+.
T Consensus 407 ~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~sslvSfsy 486 (1062)
T KOG1912|consen 407 SSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNSSLVSFSY 486 (1062)
T ss_pred CCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhhhcccccceeeeeeccceeEEEeee
Confidence 11111111 112222111 24889999999999999999998888999999999999987766654332
Q ss_pred C---------CC-EEEEEecCCceE--EEec-CCCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 342 T---------EG-LKVYGWEPARQY--DAQP-MGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 342 ~---------DG-I~IWDl~tgk~l--~tl~-~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
. -+ +.|-|+.+|... +.+. ....+|+.+..| -++|+++- +-+|.+...
T Consensus 487 s~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~ 553 (1062)
T KOG1912|consen 487 SHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTL 553 (1062)
T ss_pred ccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceEEEEecccchHHHhhccc
Confidence 1 12 677888887533 3233 356789999999 99999988 677866444
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.8e-09 Score=111.32 Aligned_cols=257 Identities=18% Similarity=0.286 Sum_probs=172.2
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-----eEEEecCC------------CCCeEEEEEcCCCC--EEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-----CIMSLSGH------------STPVESVQFGNGEE--TLSA 75 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-----~i~~l~~h------------~~~V~sLafSpdg~--~LaS 75 (845)
.+-|.++.|.. .|++||||..+|.|.++.-.... ....++.| ...|..+.|.++++ .++.
T Consensus 25 adiis~vef~~-~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 25 ADIISAVEFDH-YGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred hcceeeEEeec-ccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 35789999998 99999999999999999754322 23334444 24688999998654 5666
Q ss_pred EECCCcEEEEECCCCcEE-----------------------------------EEE-cCCCCCeEEEEEccCCCEEEEEE
Q psy467 76 GCQSGSIKIWNLAVPTVQ-----------------------------------RTL-NGHKSSITSVDFHPYGDYLCSGS 119 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v-----------------------------------~~l-~~h~~~V~~lafspdg~~Lasgs 119 (845)
.+.|.+|++|.+...... +.+ .+|...|.+|.++.|+..++++.
T Consensus 104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD 183 (433)
T KOG1354|consen 104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD 183 (433)
T ss_pred ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc
Confidence 678999999987532110 111 25777899999999998888875
Q ss_pred CCCeEEEEECCCCce---EEEEcCC-----CCCeEEEEEecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 120 LDSFIKLWDLRRKGC---IYTYRGH-----SKSINSIRFSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 120 ~DG~I~IWDl~t~~~---l~~~~~h-----~~~V~sLafSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
|=.|.+|+++--.. +..++.+ ..-|++..|+|. .++++-.+..|+|++ .|++....-
T Consensus 184 -dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrL-------------cDmR~~aLC 249 (433)
T KOG1354|consen 184 -DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRL-------------CDMRQSALC 249 (433)
T ss_pred -ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEE-------------eechhhhhh
Confidence 66799999853222 2233333 235788899994 677888888999999 999854431
Q ss_pred CCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCc
Q psy467 191 GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGT 270 (845)
Q Consensus 191 ~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~ 270 (845)
... -..+.....+ ... .-
T Consensus 250 d~h----------------sKlfEepedp------------------------------------------~~r----sf 267 (433)
T KOG1354|consen 250 DAH----------------SKLFEEPEDP------------------------------------------SSR----SF 267 (433)
T ss_pred cch----------------hhhhccccCC------------------------------------------cch----hh
Confidence 000 0011111111 000 00
Q ss_pred ccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC-CCCeEEEEecCCC------------CCE---EEEEEeCCC
Q psy467 271 CVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL-EKFSLVSTTEKNS------------STI---RRLTFSEGG 334 (845)
Q Consensus 271 ~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl-~s~~~l~tl~gh~------------~~V---tslafSpdG 334 (845)
.-.....|..+.|+.+|+ ++++-.. -+|++||+ ...+++.+++.|. ..| ..++|+-++
T Consensus 268 fseiIsSISDvKFs~sGr-----yilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~ 341 (433)
T KOG1354|consen 268 FSEIISSISDVKFSHSGR-----YILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGND 341 (433)
T ss_pred HHHHhhhhhceEEccCCc-----EEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCc
Confidence 011234556677777777 8877543 58999999 4566777777653 222 468899999
Q ss_pred CEEEEEeCCC-EEEEEecCCc
Q psy467 335 ECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 335 ~~Lasgs~DG-I~IWDl~tgk 354 (845)
.++++|+... +++|+...|.
T Consensus 342 ~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 342 SYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred ceEecccccceEEEecCCCCc
Confidence 9999999999 9999977654
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.6e-08 Score=108.66 Aligned_cols=312 Identities=12% Similarity=0.156 Sum_probs=203.1
Q ss_pred CcEEEEEEecCCCCEEEEEeCCC---------------eEEEEECCCCeeEEEecCCCCC--eE-EEEEcCCCCEEEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDK---------------KVNLWALGKSNCIMSLSGHSTP--VE-SVQFGNGEETLSAGC 77 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG---------------~I~IWdl~t~~~i~~l~~h~~~--V~-sLafSpdg~~LaSgs 77 (845)
..|.-+.||| ++.||.+-+..+ .+.+||+.++..+..+.....+ .+ -+.|+-+..++|-.
T Consensus 72 ~~V~~~~fSP-~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv- 149 (561)
T COG5354 72 PDVKYLDFSP-NEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV- 149 (561)
T ss_pred CCceecccCc-ccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-
Confidence 3588899999 999999976433 4999999999999998876666 55 78899988877655
Q ss_pred CCCcEEEEECCCCcEE-EEEcCC-CCCeEEEEEccCC--CEEEE-----EECCCeEEEEECCCCceEEEEcCCCCCeEEE
Q psy467 78 QSGSIKIWNLAVPTVQ-RTLNGH-KSSITSVDFHPYG--DYLCS-----GSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148 (845)
Q Consensus 78 ~DGtV~VWDl~tg~~v-~~l~~h-~~~V~~lafspdg--~~Las-----gs~DG~I~IWDl~t~~~l~~~~~h~~~V~sL 148 (845)
....+.|+++ ++... .-+... ...|....|+|.+ ..|+. .+.++++++|.+..+..+.+..-....=..+
T Consensus 150 v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qL 228 (561)
T COG5354 150 VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQL 228 (561)
T ss_pred ccCeEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEE
Confidence 4567999997 33221 111111 2458888999964 34443 4577899999998777766544444444678
Q ss_pred EEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC-CCCCCCcceeecCCCCeEEEEecCCCCCccceeeE
Q psy467 149 RFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT-PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 149 afSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~-~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
.|.+.|+++++--.... .. ..-.+....++++++....+-.. ...+.+.+++|.|.++....+.|.... .+.+
T Consensus 229 kW~~~g~~ll~l~~t~~-ks-nKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa----~~s~ 302 (561)
T COG5354 229 KWQVLGKYLLVLVMTHT-KS-NKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPA----SVSV 302 (561)
T ss_pred EEecCCceEEEEEEEee-ec-ccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEeccccc----ceee
Confidence 99999998765432111 11 11122344566688774433222 236778899999999888877654332 0111
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEE-cCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC---Ce
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIF-QPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD---RT 303 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~f-spdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D---G~ 303 (845)
+++. ..+.+ -|. ...+.+.|+|.++ +++.++-| |.
T Consensus 303 ~~lr-----------------------~Nl~~~~Pe-------------~~rNT~~fsp~~r-----~il~agF~nl~gn 341 (561)
T COG5354 303 FDLR-----------------------GNLRFYFPE-------------QKRNTIFFSPHER-----YILFAGFDNLQGN 341 (561)
T ss_pred cccc-----------------------cceEEecCC-------------cccccccccCccc-----EEEEecCCccccc
Confidence 1110 11111 121 2235667777777 66665544 78
Q ss_pred EEEEECCCCeEEE-EecCCCCCEEEEEEeCCCCEEEEEeC------CC-EEEEEecCCceEEEecCCCCCeEEEEEc-CC
Q psy467 304 VNFWDLEKFSLVS-TTEKNSSTIRRLTFSEGGECLLGGDT------EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GT 374 (845)
Q Consensus 304 I~IWDl~s~~~l~-tl~gh~~~VtslafSpdG~~Lasgs~------DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg 374 (845)
|.+||......+. .+.+. ..+-+.|+|||+++.++.. |. |.|||+...... ..+.+.|. .+
T Consensus 342 i~i~~~~~rf~~~~~~~~~--n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~f--------el~~~~W~p~~ 411 (561)
T COG5354 342 IEIFDPAGRFKVAGAFNGL--NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKVF--------ELTNITWDPSG 411 (561)
T ss_pred eEEeccCCceEEEEEeecC--CceEeeccCCceEEEecCCCcccccCcceEEEEecCchhh--------hhhhccccCCc
Confidence 9999987664443 66653 4566789999999887643 45 999998654322 56677888 78
Q ss_pred ceEEEEEEEEeeC
Q psy467 375 QLWFRRVGTWSHQ 387 (845)
Q Consensus 375 ~lLaaSVsiW~~d 387 (845)
++..++-+.|.+.
T Consensus 412 ~~~ttsSs~~~h~ 424 (561)
T COG5354 412 QYVTTSSSCPKHK 424 (561)
T ss_pred ccceeeccCCCCc
Confidence 9988888888653
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.6e-08 Score=111.81 Aligned_cols=299 Identities=11% Similarity=0.106 Sum_probs=186.6
Q ss_pred cEEEEEEecCCCCEEEEEe-----C-----CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGG-----D-----DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs-----~-----DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
.+.++.||| .|.+|.|-- . .-.+.+|+++++.....+......-++..|+.|..+.| --..+.|.+|+
T Consensus 75 ~~~~L~fSP-~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~a-rlv~nev~f~~ 152 (566)
T KOG2315|consen 75 KTYDLLFSP-KGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAA-RLVSNEVQFYD 152 (566)
T ss_pred eeeeeeecc-cccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhhhh-hhhcceEEEEe
Confidence 788999999 899888741 1 23477999998655544443333337899999876433 33467899999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCC--CEEEE-----EECCCeEEEEECCCCceE-----EEEcCCCCCeEEEEEecCC
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYG--DYLCS-----GSLDSFIKLWDLRRKGCI-----YTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg--~~Las-----gs~DG~I~IWDl~t~~~l-----~~~~~h~~~V~sLafSPdg 154 (845)
..+.+.... .-|...|+.+.++|.+ ..+|+ .+.-+.|+||.......- ++|. ...-..+.|.+-|
T Consensus 153 ~~~f~~~~~-kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFF--kadkvqm~WN~~g 229 (566)
T KOG2315|consen 153 LGSFKTIQH-KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFF--KADKVQMKWNKLG 229 (566)
T ss_pred cCCccceee-eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhcccc--ccceeEEEeccCC
Confidence 987443322 2257779999999974 34443 345568999988632211 1221 1223457888866
Q ss_pred CEE-EE--EeCCCcEEEeeeeccCCceeEEEECCCCccCCC-CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 155 QWI-AS--GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT-PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 155 ~~L-as--gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~-~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
.-| +. ...|.+ ....+....++++++......-. .....+.++.|+++++......|....
T Consensus 230 t~LLvLastdVDkt----n~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPA----------- 294 (566)
T KOG2315|consen 230 TALLVLASTDVDKT----NASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPA----------- 294 (566)
T ss_pred ceEEEEEEEeecCC----CccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccc-----------
Confidence 532 22 222331 11233455667788874444333 337889999999999988777665443
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC---CCeEEEE
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA---DRTVNFW 307 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~---DG~I~IW 307 (845)
..-.|..++..+ ..-..++.+++-|+|.|+ +++.++- .|.|-||
T Consensus 295 ------------------------kvtifnlr~~~v----~df~egpRN~~~fnp~g~-----ii~lAGFGNL~G~mEvw 341 (566)
T KOG2315|consen 295 ------------------------KVTIFNLRGKPV----FDFPEGPRNTAFFNPHGN-----IILLAGFGNLPGDMEVW 341 (566)
T ss_pred ------------------------eEEEEcCCCCEe----EeCCCCCccceEECCCCC-----EEEEeecCCCCCceEEE
Confidence 222233333210 001135567888888888 5554443 4899999
Q ss_pred ECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeC------C-CEEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 308 DLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDT------E-GLKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 308 Dl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~------D-GI~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
|+.+.+++..+... ..+-+.|+|||+++++++. | |++||++.. ..+....-.. ....+.|-
T Consensus 342 Dv~n~K~i~~~~a~--~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG-~~l~~~~f~s-EL~qv~W~ 409 (566)
T KOG2315|consen 342 DVPNRKLIAKFKAA--NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTG-SLLHEKMFKS-ELLQVEWR 409 (566)
T ss_pred eccchhhccccccC--CceEEEEcCCCcEEEEEeccccEEecCCeEEEEecC-ceeehhhhhH-hHhheeee
Confidence 99999998888753 5677899999999998874 3 499999854 4443221111 45566665
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.4e-08 Score=110.72 Aligned_cols=158 Identities=16% Similarity=0.223 Sum_probs=136.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecC---CCCCeEEEEEc--------------------CCCCEEEEEECCCcEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSG---HSTPVESVQFG--------------------NGEETLSAGCQSGSIK 83 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~---h~~~V~sLafS--------------------pdg~~LaSgs~DGtV~ 83 (845)
.+.++|....||.+++|+..+++....+.. -.+..++..|. .+...++-|...|.|.
T Consensus 4 ~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~ 83 (541)
T KOG4547|consen 4 ALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVL 83 (541)
T ss_pred hhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEE
Confidence 678999999999999999998887776643 23445555552 2345677788899999
Q ss_pred EEECCCCcEEEEEc--CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 84 IWNLAVPTVQRTLN--GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 84 VWDl~tg~~v~~l~--~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
++++..|+....+. .|.+.|.++.++.+-..|.+++.|+.+..|+......++.++.....+.+++.+|||..+++++
T Consensus 84 ~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as 163 (541)
T KOG4547|consen 84 LYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS 163 (541)
T ss_pred EEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc
Confidence 99999999888775 6899999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCC
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPG 219 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~ 219 (845)
+.|.+ ||+++++. +..|.+|...
T Consensus 164 --~~ik~-------------~~~~~kev--------------------v~~ftgh~s~ 186 (541)
T KOG4547|consen 164 --RQIKV-------------LDIETKEV--------------------VITFTGHGSP 186 (541)
T ss_pred --ceEEE-------------EEccCceE--------------------EEEecCCCcc
Confidence 57999 99999999 9999999988
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.9e-07 Score=102.69 Aligned_cols=181 Identities=15% Similarity=0.170 Sum_probs=141.9
Q ss_pred EecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC-cEEEEECCCCcEEEEEcCCCC
Q psy467 23 LGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLAVPTVQRTLNGHKS 101 (845)
Q Consensus 23 fSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG-tV~VWDl~tg~~v~~l~~h~~ 101 (845)
|++.+|++++..+. |...|.+...+-.++ -+|...|.-..+..+++-++.|..|| .+-|+|.++++. +.+...-+
T Consensus 327 fa~~~Gd~ia~VSR-GkaFi~~~~~~~~iq--v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg 402 (668)
T COG4946 327 FAVVNGDYIALVSR-GKAFIMRPWDGYSIQ--VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLG 402 (668)
T ss_pred hccCCCcEEEEEec-CcEEEECCCCCeeEE--cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCcc
Confidence 44557889988875 566666654443333 34777799999998888999999999 899999997764 45555778
Q ss_pred CeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEE
Q psy467 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHV 181 (845)
Q Consensus 102 ~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~v 181 (845)
.|.++..+++|++++++.....|.+.|+.++.....-+...+-|+.++|+|+++++|-+--+|.+.- .|++
T Consensus 403 ~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq---------~Ikl 473 (668)
T COG4946 403 NIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQ---------SIKL 473 (668)
T ss_pred ceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeee---------eEEE
Confidence 8999999999999999999999999999998876665666788999999999999998877765433 5566
Q ss_pred EECCCCccCCCCC-CCCCcceeecCCCCeEEEEecC
Q psy467 182 VDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 182 WDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h 216 (845)
+|+.+++...... ...-.+-+|.|+++++..+...
T Consensus 474 ydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs~R 509 (668)
T COG4946 474 YDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLSAR 509 (668)
T ss_pred EecCCCeEEEecCCcccccCcccCCCCcEEEEEecc
Confidence 9999887754433 4455677899999998877653
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.5e-08 Score=109.09 Aligned_cols=239 Identities=14% Similarity=0.157 Sum_probs=154.3
Q ss_pred CCCCeEEEEEcCCCCEE-EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE
Q psy467 57 HSTPVESVQFGNGEETL-SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI 135 (845)
Q Consensus 57 h~~~V~sLafSpdg~~L-aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l 135 (845)
|....+.|..+|||+|+ |+|...-.|++||+.+-.+...-......|...-.+.|-..++.-..|.+|-+...- | .-
T Consensus 50 ~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~-G-~h 127 (703)
T KOG2321|consen 50 MPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY-G-RH 127 (703)
T ss_pred CccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhc-C-ee
Confidence 67788999999999986 556668899999998654332222123345555555555566666677777655422 2 11
Q ss_pred EEEcCCCCCeEEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe
Q psy467 136 YTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 136 ~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~ 214 (845)
..++ -...-..|+++. ...+++ ++....|+- +++..|.- +..+.
T Consensus 128 y~~R-IP~~GRDm~y~~~scDly~-~gsg~evYR-------------lNLEqGrf--------------------L~P~~ 172 (703)
T KOG2321|consen 128 YRTR-IPKFGRDMKYHKPSCDLYL-VGSGSEVYR-------------LNLEQGRF--------------------LNPFE 172 (703)
T ss_pred eeee-cCcCCccccccCCCccEEE-eecCcceEE-------------EEcccccc--------------------ccccc
Confidence 1221 112234555553 334444 444445666 78887776 33333
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
..... + +++..++... +
T Consensus 173 ~~~~~-------l---------------------------N~v~in~~hg-----------------------------L 189 (703)
T KOG2321|consen 173 TDSGE-------L---------------------------NVVSINEEHG-----------------------------L 189 (703)
T ss_pred ccccc-------c---------------------------eeeeecCccc-----------------------------e
Confidence 33222 3 5555555555 9
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEecC------CCC-----CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe-cC
Q psy467 295 TTSSSADRTVNFWDLEKFSLVSTTEK------NSS-----TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ-PM 361 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~~~l~tl~g------h~~-----~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl-~~ 361 (845)
|++|+.+|.|.+||.+....+.++.. |.+ .|+++.|+.+|-.+++|+.+| +.|||+.+.+.+..- .+
T Consensus 190 la~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~ 269 (703)
T KOG2321|consen 190 LACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHG 269 (703)
T ss_pred EEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccC
Confidence 99999999999999998877666652 222 499999999999999999999 999999998776433 23
Q ss_pred CCCCeEEEEEc--CCceEEEE-----EEEEee-CCCCCcccc
Q psy467 362 GWGKVQDLAVT--GTQLWFRR-----VGTWSH-QDSGFSTLD 395 (845)
Q Consensus 362 h~~~VtsVafS--dg~lLaaS-----VsiW~~-d~~~~~~~~ 395 (845)
..-+|..+.|. +++--++| +.+|.- +++++....
T Consensus 270 ~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiE 311 (703)
T KOG2321|consen 270 YELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASIE 311 (703)
T ss_pred CccceeeecccccCCCceEEecchHHhhhcccccCCceeecc
Confidence 34578899997 44444444 899953 455554433
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.4e-09 Score=122.52 Aligned_cols=151 Identities=22% Similarity=0.263 Sum_probs=121.2
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCC----CeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST----PVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~----~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg 90 (845)
.+.|....+.- ....++.++.++.+.+||...+.....+..... ...-+.++++.-++++|+.-+.|.+|+....
T Consensus 87 s~wi~g~~l~~-e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~d 165 (967)
T KOG0974|consen 87 SDWIFGAKLFE-ENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHED 165 (967)
T ss_pred cccccccchhh-hcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEecccc
Confidence 34444445544 556788888888999999987776666553222 1223345677789999999999999999754
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEE-EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIY-TYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~-~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+.-..+.+|++.|..+.|+-||+++++.+.|.++++|++.+.+... ..-+|...++.++|.|+ .+++++.|.+.++
T Consensus 166 n~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrv 242 (967)
T KOG0974|consen 166 NKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRV 242 (967)
T ss_pred CCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEE
Confidence 4444688999999999999999999999999999999999988766 56679999999999987 8999999999999
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.4e-06 Score=93.96 Aligned_cols=259 Identities=11% Similarity=0.124 Sum_probs=166.8
Q ss_pred CCcEEEEECCCCc----EEEEEcCCCCCeEEEEEccCCCEEEEEECC---CeEEEEECCC--Cce--EEEEcCCCCCeEE
Q psy467 79 SGSIKIWNLAVPT----VQRTLNGHKSSITSVDFHPYGDYLCSGSLD---SFIKLWDLRR--KGC--IYTYRGHSKSINS 147 (845)
Q Consensus 79 DGtV~VWDl~tg~----~v~~l~~h~~~V~~lafspdg~~Lasgs~D---G~I~IWDl~t--~~~--l~~~~~h~~~V~s 147 (845)
+..|.+|++++.. .+..+ ...+..+-++|+|++++|+++..+ |.|..|.+.. |+. +........+.+.
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v-~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~y 93 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLV-AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCY 93 (346)
T ss_pred CCceEEEEEeCcccccchhhhc-cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeE
Confidence 5679999998432 12222 356678899999999999887654 6777777754 433 2222223344588
Q ss_pred EEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECCC-CccCCC--------------CCCCCCcceeecCCCCeEE
Q psy467 148 IRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLSL-VHPLGT--------------PPPQYTSSVPFSHNTSLRK 211 (845)
Q Consensus 148 LafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~~--------------~~~~~i~svs~spdg~~l~ 211 (845)
++++++|++++++.. .|.|.+ +-+.. |..... -....+....++|+++++.
T Consensus 94 vsvd~~g~~vf~AnY~~g~v~v-------------~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~ 160 (346)
T COG2706 94 VSVDEDGRFVFVANYHSGSVSV-------------YPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLV 160 (346)
T ss_pred EEECCCCCEEEEEEccCceEEE-------------EEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEE
Confidence 999999999887764 567777 55533 221111 0023366788999999888
Q ss_pred EEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCC-CcccccccCceeEEEcCCCCcc
Q psy467 212 SFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS-GTCVPVSVSRTSLSILPQSPML 290 (845)
Q Consensus 212 ~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~-~~~~~~~~~I~slafSPdg~~~ 290 (845)
...-..+. | ....+. +|.+... .....-..+-+.++|+|+++.
T Consensus 161 v~DLG~Dr-------i---------------------------~~y~~~-dg~L~~~~~~~v~~G~GPRHi~FHpn~k~- 204 (346)
T COG2706 161 VPDLGTDR-------I---------------------------FLYDLD-DGKLTPADPAEVKPGAGPRHIVFHPNGKY- 204 (346)
T ss_pred EeecCCce-------E---------------------------EEEEcc-cCccccccccccCCCCCcceEEEcCCCcE-
Confidence 76655544 3 233333 3332211 111233456678999999983
Q ss_pred cceEEEEEeCCCeEEEEECCCC-eEEEEecC---------CCCCEEEEEEeCCCCEEEEEeCCC--EEEEEecCC-ceE-
Q psy467 291 CFILTTSSSADRTVNFWDLEKF-SLVSTTEK---------NSSTIRRLTFSEGGECLLGGDTEG--LKVYGWEPA-RQY- 356 (845)
Q Consensus 291 ~~~lLatgs~DG~I~IWDl~s~-~~l~tl~g---------h~~~VtslafSpdG~~Lasgs~DG--I~IWDl~tg-k~l- 356 (845)
..+++--+++|.+|..+.. ..+..++. ...+..++..++||++|.++.... |.+|.++.. ..+
T Consensus 205 ---aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~ 281 (346)
T COG2706 205 ---AYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLE 281 (346)
T ss_pred ---EEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEE
Confidence 3445556899999998773 22222221 245688999999999999987655 888888753 222
Q ss_pred --EEecCCCCCeEEEEEc-CCceEEEE------EEEEeeCCCC
Q psy467 357 --DAQPMGWGKVQDLAVT-GTQLWFRR------VGTWSHQDSG 390 (845)
Q Consensus 357 --~tl~~h~~~VtsVafS-dg~lLaaS------VsiW~~d~~~ 390 (845)
.....+....++..|+ +|++|+++ +.++..+...
T Consensus 282 ~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~T 324 (346)
T COG2706 282 LVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKET 324 (346)
T ss_pred EEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCC
Confidence 3334455668999999 88888887 8888776553
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.1e-08 Score=104.39 Aligned_cols=244 Identities=19% Similarity=0.311 Sum_probs=156.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc-----EEEEEcCCC------------CCeEEEEEccCC--CEEEE
Q psy467 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT-----VQRTLNGHK------------SSITSVDFHPYG--DYLCS 117 (845)
Q Consensus 57 h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~-----~v~~l~~h~------------~~V~~lafspdg--~~Las 117 (845)
..+-|.++.|...|.+||+|..+|.|.++.-.... ....++.|. ..|..+.|.+++ ..++.
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 35678999999999999999999999999754322 334455554 357889999876 46778
Q ss_pred EECCCeEEEEECCCCceEE-----------------------------------EE-cCCCCCeEEEEEecCCCEEEEEe
Q psy467 118 GSLDSFIKLWDLRRKGCIY-----------------------------------TY-RGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 118 gs~DG~I~IWDl~t~~~l~-----------------------------------~~-~~h~~~V~sLafSPdg~~Lasgs 161 (845)
.+.|.+|++|.+....... .+ .+|.-.|+++.++.|+..++++
T Consensus 104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA- 182 (433)
T KOG1354|consen 104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA- 182 (433)
T ss_pred ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-
Confidence 8899999999885322110 11 1455667777777777766665
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
.|=.|.+ |++.-... .++|
T Consensus 183 DdLRINL-------------Wnlei~d~----------------------------------sFnI-------------- 201 (433)
T KOG1354|consen 183 DDLRINL-------------WNLEIIDQ----------------------------------SFNI-------------- 201 (433)
T ss_pred cceeeee-------------ccccccCC----------------------------------ceeE--------------
Confidence 3445556 77652221 0001
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE----EE
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV----ST 317 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l----~t 317 (845)
+..-|... -....-|++..|+|..- ++++-.++.|+|++-|++...+- ..
T Consensus 202 ---------------VDIKP~nm-------EeLteVITsaEFhp~~c----n~f~YSSSKGtIrLcDmR~~aLCd~hsKl 255 (433)
T KOG1354|consen 202 ---------------VDIKPANM-------EELTEVITSAEFHPHHC----NVFVYSSSKGTIRLCDMRQSALCDAHSKL 255 (433)
T ss_pred ---------------EEccccCH-------HHHHHHHhhhccCHhHc----cEEEEecCCCcEEEeechhhhhhcchhhh
Confidence 11112111 11122334445555432 28888899999999999853211 01
Q ss_pred ec------------CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEec-CCceEEEecCCC------------CCe---EEE
Q psy467 318 TE------------KNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE-PARQYDAQPMGW------------GKV---QDL 369 (845)
Q Consensus 318 l~------------gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~-tgk~l~tl~~h~------------~~V---tsV 369 (845)
+. .--..|..+.|+++|++|++-+.-.|+|||+. ..+.+.++..|. +.| ..+
T Consensus 256 fEepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec 335 (433)
T KOG1354|consen 256 FEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFEC 335 (433)
T ss_pred hccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEE
Confidence 11 11246899999999999999887779999995 456667776664 222 457
Q ss_pred EEc-CCceEEEE-----EEEEeeCC
Q psy467 370 AVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 370 afS-dg~lLaaS-----VsiW~~d~ 388 (845)
+|+ ++..++++ +.++..+.
T Consensus 336 ~~sg~~~~v~TGsy~n~frvf~~~~ 360 (433)
T KOG1354|consen 336 SWSGNDSYVMTGSYNNVFRVFNLAR 360 (433)
T ss_pred EEcCCcceEecccccceEEEecCCC
Confidence 889 77788777 67776443
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.7e-06 Score=97.86 Aligned_cols=285 Identities=13% Similarity=0.046 Sum_probs=167.2
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV 106 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~l 106 (845)
.+..+++++.+|.|.-+|..+|+.+....-.......... ++..++.++.+|.+..+|..+|+.+...... ..+.+.
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~ 140 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLS-SEVLSP 140 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccC-ceeecC
Confidence 3567888888999999999999988776544322222222 4677888889999999999999988776532 222221
Q ss_pred EEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeE-----EEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEE
Q psy467 107 DFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN-----SIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHV 181 (845)
Q Consensus 107 afspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~-----sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~v 181 (845)
-.. .+..++.++.+|.|..||.++++.+..+......+. +.... +..++.+..+|.+..
T Consensus 141 p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~a------------- 204 (377)
T TIGR03300 141 PLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVA------------- 204 (377)
T ss_pred CEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--CCEEEEECCCCEEEE-------------
Confidence 111 345777788899999999999998888764332211 11122 346677777788877
Q ss_pred EECCCCccCCCCCCC---C---C---cceeecC--CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhcc
Q psy467 182 VDLSLVHPLGTPPPQ---Y---T---SSVPFSH--NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250 (845)
Q Consensus 182 WDl~tg~~l~~~~~~---~---i---~svs~sp--dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~ 250 (845)
+|..+|+.+...... . . ..+.-+| .+..+.. .....
T Consensus 205 ld~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~-~~~~g-------------------------------- 251 (377)
T TIGR03300 205 LDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYA-VSYQG-------------------------------- 251 (377)
T ss_pred EEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEE-EEcCC--------------------------------
Confidence 888777653221100 0 0 0000000 0011111 00010
Q ss_pred CCCceeEEEcCC-CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC-CCCEEEE
Q psy467 251 NPCDYSAIFQPH-RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN-SSTIRRL 328 (845)
Q Consensus 251 ~~~~~~l~fspd-g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh-~~~Vtsl 328 (845)
...++.+. |...-... ......++. ++. .+++++.||.+..+|..+++.+...... .....+.
T Consensus 252 ----~l~a~d~~tG~~~W~~~----~~~~~~p~~--~~~-----~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp 316 (377)
T TIGR03300 252 ----RVAALDLRSGRVLWKRD----ASSYQGPAV--DDN-----RLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAP 316 (377)
T ss_pred ----EEEEEECCCCcEEEeec----cCCccCceE--eCC-----EEEEECCCCeEEEEECCCCcEEEccccccCCccccC
Confidence 11112111 11000000 000111222 223 6777788999999999999887766321 1122222
Q ss_pred EEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCC-eEEEEEcCCceEEEE
Q psy467 329 TFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGK-VQDLAVTGTQLWFRR 380 (845)
Q Consensus 329 afSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~-VtsVafSdg~lLaaS 380 (845)
.. .+..|++++.+| |+++|..+|+.+..+..+... ....++.++++++++
T Consensus 317 ~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~~ 368 (377)
T TIGR03300 317 AV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQT 368 (377)
T ss_pred EE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEEe
Confidence 22 466889999999 999999999999888876643 344455577766665
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.5e-07 Score=112.27 Aligned_cols=258 Identities=13% Similarity=0.139 Sum_probs=160.8
Q ss_pred EEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC--------------CCCCeEEEEEcCCCCEEEEEEC-CCcEE
Q psy467 19 NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG--------------HSTPVESVQFGNGEETLSAGCQ-SGSIK 83 (845)
Q Consensus 19 ~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~--------------h~~~V~sLafSpdg~~LaSgs~-DGtV~ 83 (845)
..+++++.+++++++-..++.|++||.. +..+..+.+ +-.....++++++++.|+++.. .+.|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir 649 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR 649 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence 3678887567777777888899999975 444443332 1123578999998887666554 57799
Q ss_pred EEECCCCcEEEEEcCC-----------------CCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEEcCC----
Q psy467 84 IWNLAVPTVQRTLNGH-----------------KSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGH---- 141 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h-----------------~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h---- 141 (845)
++|..++. +.++.+. -..-..++|+|+ +..+++.+.++.|++||..++... .+.+.
T Consensus 650 ~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~ 727 (1057)
T PLN02919 650 EIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYER 727 (1057)
T ss_pred EEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccc
Confidence 99998764 4433210 012357999994 555666677889999999776542 22110
Q ss_pred -----------CCCeEEEEEecCCCEEE-EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe
Q psy467 142 -----------SKSINSIRFSPDGQWIA-SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 142 -----------~~~V~sLafSPdg~~La-sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
-.....++++|++++|+ +-+.++.|++ ||+.++..
T Consensus 728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv-------------~D~~tg~~-------------------- 774 (1057)
T PLN02919 728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRA-------------LDLKTGGS-------------------- 774 (1057)
T ss_pred cCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEE-------------EECCCCcE--------------------
Confidence 12456799999998554 4456688888 99876543
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEc-CCCCcCCCCcccccccCceeEEEcCCCC
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQ-PHRSLNRSGTCVPVSVSRTSLSILPQSP 288 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fs-pdg~~~~~~~~~~~~~~I~slafSPdg~ 288 (845)
.....+.... . . ....|. .++. + ..........++++++|+
T Consensus 775 ~~~~gg~~~~-~-----~---------------------------~l~~fG~~dG~----g-~~~~l~~P~Gvavd~dG~ 816 (1057)
T PLN02919 775 RLLAGGDPTF-S-----D---------------------------NLFKFGDHDGV----G-SEVLLQHPLGVLCAKDGQ 816 (1057)
T ss_pred EEEEeccccc-C-----c---------------------------ccccccCCCCc----h-hhhhccCCceeeEeCCCc
Confidence 1110000000 0 0 000000 0000 0 000111224567777776
Q ss_pred cccceEEEEEeCCCeEEEEECCCCeEEEEec-------------CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc
Q psy467 289 MLCFILTTSSSADRTVNFWDLEKFSLVSTTE-------------KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 289 ~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~-------------gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk 354 (845)
++++.+.++.|++||..++....... ++-.....++++++|+++++.+.++ |++||+.+++
T Consensus 817 -----LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 817 -----IYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGE 891 (1057)
T ss_pred -----EEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 88888899999999998876553321 1112567899999999887777777 9999998876
Q ss_pred e
Q psy467 355 Q 355 (845)
Q Consensus 355 ~ 355 (845)
.
T Consensus 892 ~ 892 (1057)
T PLN02919 892 A 892 (1057)
T ss_pred c
Confidence 4
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=2e-07 Score=97.60 Aligned_cols=273 Identities=15% Similarity=0.153 Sum_probs=181.6
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEe------------CCCeEEEEECCCCeeEE--Ee-cCCCCCeEEEEEcC---CCC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGG------------DDKKVNLWALGKSNCIM--SL-SGHSTPVESVQFGN---GEE 71 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs------------~DG~I~IWdl~t~~~i~--~l-~~h~~~V~sLafSp---dg~ 71 (845)
.|+.-.-++.|++-.+ ++||+|+ ..|.+.+|++.+.+... ++ ...+..+..+.|.- +|.
T Consensus 9 ~l~~~~~~~C~l~~~~---~vLa~GTY~Lde~d~~smvR~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~ 85 (339)
T KOG0280|consen 9 ELEADPVPICCLCHTR---NVLAAGTYLLDEGDYPSMVRSGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGD 85 (339)
T ss_pred eeccCCCCcccccccc---ceEEEeeEEecCCCCchheeccceEEEeecccccCccceeeeecccccceeeeeeccCCcc
Confidence 3444555666666655 4777774 34678899987665433 11 22355677888864 455
Q ss_pred -EEEEEECCCcEEEEECCCCcEEEEEcCCC------CCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE--EEEcCCC
Q psy467 72 -TLSAGCQSGSIKIWNLAVPTVQRTLNGHK------SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI--YTYRGHS 142 (845)
Q Consensus 72 -~LaSgs~DGtV~VWDl~tg~~v~~l~~h~------~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l--~~~~~h~ 142 (845)
.++-+-..|.|.++..........+.+-. ....++.|++.+..++++..+|.+.+-+....... +.++.|.
T Consensus 86 ~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He 165 (339)
T KOG0280|consen 86 FNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHE 165 (339)
T ss_pred ceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccc
Confidence 45566678999999876554444443221 12457889999999999999999986665555443 4788999
Q ss_pred CCeEEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCc
Q psy467 143 KSINSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGT 221 (845)
Q Consensus 143 ~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~ 221 (845)
-+.+-..|+- +.+.+.+|+.|+.+.. ||++..+. .. ......|..+
T Consensus 166 ~E~Wta~f~~~~pnlvytGgDD~~l~~-------------~D~R~p~~-----------~i-------~~n~kvH~~G-- 212 (339)
T KOG0280|consen 166 FEAWTAKFSDKEPNLVYTGGDDGSLSC-------------WDIRIPKT-----------FI-------WHNSKVHTSG-- 212 (339)
T ss_pred eeeeeeecccCCCceEEecCCCceEEE-------------EEecCCcc-----------ee-------eecceeeecc--
Confidence 9999999986 4578999999999999 99983222 00 1112223333
Q ss_pred cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 222 KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 222 ~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
| .++.-+|... . ++++|+.|
T Consensus 213 -----V---------------------------~SI~ss~~~~-----------------------~-----~I~TGsYD 232 (339)
T KOG0280|consen 213 -----V---------------------------VSIYSSPPKP-----------------------T-----YIATGSYD 232 (339)
T ss_pred -----e---------------------------EEEecCCCCC-----------------------c-----eEEEeccc
Confidence 3 3333333321 1 89999999
Q ss_pred CeEEEEECCC-CeEEEEecCCCCCEEEEEEeCC--CCEEEEEeCCCEEEEEecCC--c---eEEEecCCCCCeEEEEEc-
Q psy467 302 RTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEG--GECLLGGDTEGLKVYGWEPA--R---QYDAQPMGWGKVQDLAVT- 372 (845)
Q Consensus 302 G~I~IWDl~s-~~~l~tl~gh~~~VtslafSpd--G~~Lasgs~DGI~IWDl~tg--k---~l~tl~~h~~~VtsVafS- 372 (845)
-.|++||.++ ++++..-.- .+.|..+.++|. ++.|+++-.+|.+|-+.+.+ + .+...+.|.+-...-.|.
T Consensus 233 e~i~~~DtRnm~kPl~~~~v-~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~ 311 (339)
T KOG0280|consen 233 ECIRVLDTRNMGKPLFKAKV-GGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDS 311 (339)
T ss_pred cceeeeehhcccCccccCcc-ccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeeeccccccceeecccccc
Confidence 9999999984 566554442 478999999994 56778888888888887654 2 334556677767776775
Q ss_pred CCceEEE
Q psy467 373 GTQLWFR 379 (845)
Q Consensus 373 dg~lLaa 379 (845)
...++|+
T Consensus 312 ~~~~lAT 318 (339)
T KOG0280|consen 312 KDSFLAT 318 (339)
T ss_pred ccceeee
Confidence 3344444
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.92 E-value=3e-06 Score=105.59 Aligned_cols=189 Identities=12% Similarity=0.173 Sum_probs=122.8
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEE----ECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC--
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLW----ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA-- 88 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IW----dl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~-- 88 (845)
.+.|.++.|.+ +...++.+..+|.|.+. +..+.. +.....-...|.+++||||+..|+..+.+++|.+-.-.
T Consensus 75 ~~~ivs~~yl~-d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd 152 (928)
T PF04762_consen 75 NDKIVSFQYLA-DSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFD 152 (928)
T ss_pred CCcEEEEEecc-CCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccce
Confidence 46899999999 77778888889999999 543322 22222345789999999999999999989888776431
Q ss_pred -------------C--------CcEEEEEcC------------------------CCCCeEEEEEccCCCEEEEEEC---
Q psy467 89 -------------V--------PTVQRTLNG------------------------HKSSITSVDFHPYGDYLCSGSL--- 120 (845)
Q Consensus 89 -------------t--------g~~v~~l~~------------------------h~~~V~~lafspdg~~Lasgs~--- 120 (845)
. |+.-..|+| +...-..|+|-.||.+||+.+.
T Consensus 153 ~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~ 232 (928)
T PF04762_consen 153 PISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPE 232 (928)
T ss_pred EEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcC
Confidence 0 111111111 1223457889999999998774
Q ss_pred C---CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC---CCcEEEeeeeccCCceeEEEECCCCccCCCCC
Q psy467 121 D---SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE---DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP 194 (845)
Q Consensus 121 D---G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~---DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~ 194 (845)
. ..|+||+-+ |....+-..-.+--.+++|.|.|+++|+... ...|.+ |..+.-.-.-++++. ...
T Consensus 233 ~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvF---fErNGLrhgeF~l~~-----~~~ 303 (928)
T PF04762_consen 233 TGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVF---FERNGLRHGEFTLRF-----DPE 303 (928)
T ss_pred CCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEE---EecCCcEeeeEecCC-----CCC
Confidence 3 479999965 6655555544444567899999999988764 223344 111111111122221 112
Q ss_pred CCCCcceeecCCCCeEEEEe
Q psy467 195 PQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 195 ~~~i~svs~spdg~~l~~~~ 214 (845)
...+..+.|+.++..++...
T Consensus 304 ~~~v~~l~Wn~ds~iLAv~~ 323 (928)
T PF04762_consen 304 EEKVIELAWNSDSEILAVWL 323 (928)
T ss_pred CceeeEEEECCCCCEEEEEe
Confidence 44678999999999988865
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.2e-06 Score=100.44 Aligned_cols=120 Identities=13% Similarity=0.040 Sum_probs=78.9
Q ss_pred eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCE-EEEEEC---CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCE
Q psy467 39 KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET-LSAGCQ---SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY 114 (845)
Q Consensus 39 ~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~-LaSgs~---DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~ 114 (845)
.|.+=|.+..+ .+.+.... .+....|+|||+. ++..+. +..|.++|+.+++...... ..+......|+|||+.
T Consensus 170 ~l~~~d~dg~~-~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~ 246 (419)
T PRK04043 170 NIVLADYTLTY-QKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSK 246 (419)
T ss_pred eEEEECCCCCc-eeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCE
Confidence 45555554333 44344333 7888999999985 554443 3569999998887554443 4555667889999987
Q ss_pred EEEE-EC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC
Q psy467 115 LCSG-SL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 115 Lasg-s~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
++.. +. +..|.++|+.++.. ..+..+........|+|||+.|+..+.
T Consensus 247 la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sd 296 (419)
T PRK04043 247 LLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSD 296 (419)
T ss_pred EEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEEC
Confidence 7643 33 35688889877654 344434433445689999998776654
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.9e-09 Score=115.47 Aligned_cols=168 Identities=18% Similarity=0.338 Sum_probs=132.0
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC-------CCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG-------KSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ 78 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~-------t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~ 78 (845)
-+++.|.||...|.+++--. +.+-+++++.|.+|++|.+. +..+..+++.|+.+|.++.|-.+.++++++
T Consensus 726 irL~nf~GH~~~iRai~Aid-NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc-- 802 (1034)
T KOG4190|consen 726 IRLCNFTGHQEKIRAIAAID-NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC-- 802 (1034)
T ss_pred eeeecccCcHHHhHHHHhcc-cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--
Confidence 34678999999999998876 78889999999999999984 234677889999999999999998888876
Q ss_pred CCcEEEEECCCCcEEEEEc--CCCCCeEEEEEccC--CCEEEE-EECCCeEEEEECCCCceEEEEc-----CCCCCeEEE
Q psy467 79 SGSIKIWNLAVPTVQRTLN--GHKSSITSVDFHPY--GDYLCS-GSLDSFIKLWDLRRKGCIYTYR-----GHSKSINSI 148 (845)
Q Consensus 79 DGtV~VWDl~tg~~v~~l~--~h~~~V~~lafspd--g~~Las-gs~DG~I~IWDl~t~~~l~~~~-----~h~~~V~sL 148 (845)
||.|.+||.--++.+..+. ...+.+..+..-++ ...+.. ++...+|+++|.+.......++ +.+.-+.++
T Consensus 803 D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~i 882 (1034)
T KOG4190|consen 803 DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAI 882 (1034)
T ss_pred cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEE
Confidence 8999999998777665432 12233334444343 334444 4678899999999877665554 234568999
Q ss_pred EEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 149 RFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 149 afSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
+..+.|++++++-.+|.+.+ .|.++|+.
T Consensus 883 aVa~~GN~lAa~LSnGci~~-------------LDaR~G~v 910 (1034)
T KOG4190|consen 883 AVADKGNKLAAALSNGCIAI-------------LDARNGKV 910 (1034)
T ss_pred EeccCcchhhHHhcCCcEEE-------------EecCCCce
Confidence 99999999999999999999 99999987
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.5e-08 Score=105.01 Aligned_cols=252 Identities=15% Similarity=0.247 Sum_probs=179.5
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEEC-CCCeeEEEec-CCCCCeEEEEEcCCCCEEEEEECCCc
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLS-GHSTPVESVQFGNGEETLSAGCQSGS 81 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl-~t~~~i~~l~-~h~~~V~sLafSpdg~~LaSgs~DGt 81 (845)
+-|-++.++||.+.|++...-| ...-+++.+.|.+++||-- +.++.-..+. .-..+++++.+.++...|++|-..|+
T Consensus 13 kp~ll~~~eG~~d~vn~~~l~~-~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngt 91 (404)
T KOG1409|consen 13 KPELLSKIEGSQDDVNAAILIP-KEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGT 91 (404)
T ss_pred chhhhhhhcCchhhhhhheecc-CCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecce
Confidence 4566788999999999999988 6677999999999999954 3444333332 23578999999999999999999999
Q ss_pred EEEEECCC----CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 82 IKIWNLAV----PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 82 V~VWDl~t----g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
+.-+.+.. ....+....|...+..+-|+-.-.++++.+.|..+.---.+.+..+..+.- .....++.+.-. +.
T Consensus 92 vtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~-~~~~t~~~~d~~--~~ 168 (404)
T KOG1409|consen 92 VTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNF-ETPASALQFDAL--YA 168 (404)
T ss_pred EEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEe-eccCCCCceeeE--EE
Confidence 99887653 344455567999999999998889999999988765444444443332220 111112222211 44
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
..|...|.+.+ ..+....+ ..+..+.+|... +
T Consensus 169 fvGd~~gqvt~-------------lr~~~~~~------------------~~i~~~~~h~~~-------~---------- 200 (404)
T KOG1409|consen 169 FVGDHSGQITM-------------LKLEQNGC------------------QLITTFNGHTGE-------V---------- 200 (404)
T ss_pred EecccccceEE-------------EEEeecCC------------------ceEEEEcCcccc-------e----------
Confidence 44555555555 22221111 125556666666 5
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe-EEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS-LVS 316 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~-~l~ 316 (845)
.++.|.+... +|.+|..|..+.+||+--++ ...
T Consensus 201 -----------------~~l~Wd~~~~-----------------------------~LfSg~~d~~vi~wdigg~~g~~~ 234 (404)
T KOG1409|consen 201 -----------------TCLKWDPGQR-----------------------------LLFSGASDHSVIMWDIGGRKGTAY 234 (404)
T ss_pred -----------------EEEEEcCCCc-----------------------------EEEeccccCceEEEeccCCcceee
Confidence 6677777666 99999999999999997554 456
Q ss_pred EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 317 TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 317 tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
.+.+|...|..++.-+.-+.|++++.|| |.+|+++..
T Consensus 235 el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 235 ELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVK 272 (404)
T ss_pred eeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccce
Confidence 7789999999999988889999999999 999998753
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.5e-06 Score=94.92 Aligned_cols=245 Identities=11% Similarity=0.093 Sum_probs=149.7
Q ss_pred CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC----------CCeEEEEECCCCceEEEEcCCC-------
Q psy467 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL----------DSFIKLWDLRRKGCIYTYRGHS------- 142 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~----------DG~I~IWDl~t~~~l~~~~~h~------- 142 (845)
++|.+.|..+++.+..+.....+- .+ ++||++.|+++.. +..|.+||+.+.+.+..+....
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 899999999999999887554443 34 9999998877665 6889999999999998886422
Q ss_pred CCeEEEEEecCCCEEEEEe-C-CCcEEEeeeeccCCceeEEEECCCCccCCCCCC-CCCcceeecCCCCeEEEEecCCCC
Q psy467 143 KSINSIRFSPDGQWIASGG-E-DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP-QYTSSVPFSHNTSLRKSFTKGRPG 219 (845)
Q Consensus 143 ~~V~sLafSPdg~~Lasgs-~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~-~~i~svs~spdg~~l~~~~~h~~~ 219 (845)
.....++++|||++|++.. . +..+.+ .|+.+++.+..... ....-...+.+...+.+..+....
T Consensus 105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~V-------------vD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~ 171 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQFSPSPAVGV-------------VDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAK 171 (352)
T ss_pred CccceEEECCCCCEEEEecCCCCCEEEE-------------EECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEE
Confidence 2234789999999988765 3 678888 99999988654432 211122222222222221111000
Q ss_pred CccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC-CCCcccceEEEEE
Q psy467 220 GTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP-QSPMLCFILTTSS 298 (845)
Q Consensus 220 ~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP-dg~~~~~~lLatg 298 (845)
+ .+ +..+... ......|..+.... ...+ .|++ +|+ ++.+.
T Consensus 172 -------v-~~-------d~~g~~~--------~~~~~vf~~~~~~v-------~~rP----~~~~~dg~-----~~~vs 212 (352)
T TIGR02658 172 -------V-GY-------GTKGNPK--------IKPTEVFHPEDEYL-------INHP----AYSNKSGR-----LVWPT 212 (352)
T ss_pred -------E-Ee-------cCCCceE--------EeeeeeecCCcccc-------ccCC----ceEcCCCc-----EEEEe
Confidence 0 00 0000000 00111122211100 0001 3445 666 56555
Q ss_pred eCCCeEEEEECCC-----CeEEEEecC-------CCCCEEEEEEeCCCCEEEEEe----------CCC-EEEEEecCCce
Q psy467 299 SADRTVNFWDLEK-----FSLVSTTEK-------NSSTIRRLTFSEGGECLLGGD----------TEG-LKVYGWEPARQ 355 (845)
Q Consensus 299 s~DG~I~IWDl~s-----~~~l~tl~g-------h~~~VtslafSpdG~~Lasgs----------~DG-I~IWDl~tgk~ 355 (845)
.. |.|.+.|+.. .+.+..+.. ..+.+.-++++++|+.++++. ..+ |.++|..+++.
T Consensus 213 ~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kv 291 (352)
T TIGR02658 213 YT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKR 291 (352)
T ss_pred cC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeE
Confidence 55 9999999643 233333221 223445599999999988853 113 99999999999
Q ss_pred EEEecCCCCCeEEEEEc-CCc-eEEEE
Q psy467 356 YDAQPMGWGKVQDLAVT-GTQ-LWFRR 380 (845)
Q Consensus 356 l~tl~~h~~~VtsVafS-dg~-lLaaS 380 (845)
+..+.. ...+..++++ |++ ++.++
T Consensus 292 i~~i~v-G~~~~~iavS~Dgkp~lyvt 317 (352)
T TIGR02658 292 LRKIEL-GHEIDSINVSQDAKPLLYAL 317 (352)
T ss_pred EEEEeC-CCceeeEEECCCCCeEEEEe
Confidence 988875 3589999999 999 77666
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=8e-09 Score=127.32 Aligned_cols=160 Identities=17% Similarity=0.324 Sum_probs=135.1
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t 89 (845)
++.|-..|.++.=+| ...+.+||+.||.+++|....+..+..+. .-...|+.+.|+.+|+.+..+..||.+.+|.+.
T Consensus 2204 ~k~~v~~v~r~~sHp-~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~- 2281 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHP-SDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS- 2281 (2439)
T ss_pred eecccCceeeecCCC-CCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-
Confidence 445667899999999 77899999999999999998888776664 234889999999999999999999999999997
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEE---CCCeEEEEECCC---CceEEEEcCCCCCeEEEEEecCCCEEEEEeCC
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGS---LDSFIKLWDLRR---KGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs---~DG~I~IWDl~t---~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D 163 (845)
.+.....+.|.....++.|-. ..+++++ .++.+.+||..- ..++. ++|.+.++++++.|..+.|++|+.+
T Consensus 2282 pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~ 2357 (2439)
T KOG1064|consen 2282 PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRK 2357 (2439)
T ss_pred CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCc
Confidence 677778888999999999875 5677664 567899999742 23344 7899999999999999999999999
Q ss_pred CcEEEeeeeccCCceeEEEECCCCcc
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
|.|.+ ||++..+.
T Consensus 2358 G~v~l-------------~D~rqrql 2370 (2439)
T KOG1064|consen 2358 GEVCL-------------FDIRQRQL 2370 (2439)
T ss_pred CcEEE-------------eehHHHHH
Confidence 99999 99997776
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.3e-08 Score=125.66 Aligned_cols=218 Identities=17% Similarity=0.226 Sum_probs=162.7
Q ss_pred EeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc-CCCCCeEEEEEccCC
Q psy467 34 GGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYG 112 (845)
Q Consensus 34 gs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~-~h~~~V~~lafspdg 112 (845)
...++...-|....+.. .+..+-..|.++.=+|...+.++|+.||.|++|.+..++.+..+. .....|+.+.|+.+|
T Consensus 2186 ~n~~~~~~tq~~~~~~~--~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qG 2263 (2439)
T KOG1064|consen 2186 SNLPWLGSTQTSRGASV--MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQG 2263 (2439)
T ss_pred ccCCccccceeccccee--EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccC
Confidence 33444444454432222 233356678888889988999999999999999999998887764 234789999999999
Q ss_pred CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe---CCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG---EDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 113 ~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs---~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
+.+..+..||.+.+|.+. .++....+.|+.....+.|-. ..+++++ .++.+.+ ||.--...
T Consensus 2264 nk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~l-------------wDtl~~~~ 2327 (2439)
T KOG1064|consen 2264 NKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCL-------------WDTLLPPM 2327 (2439)
T ss_pred CceeeeccCCceeecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccc-------------hhcccCcc
Confidence 999999999999999987 677788889999999999884 5666654 4566777 88642211
Q ss_pred CCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCC
Q psy467 190 LGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSG 269 (845)
Q Consensus 190 l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~ 269 (845)
..++. ..|..+ + +++++-|..+
T Consensus 2328 -----------------~s~v~--~~H~~g-------a---------------------------T~l~~~P~~q----- 2349 (2439)
T KOG1064|consen 2328 -----------------NSLVH--TCHDGG-------A---------------------------TVLAYAPKHQ----- 2349 (2439)
T ss_pred -----------------cceee--eecCCC-------c---------------------------eEEEEcCcce-----
Confidence 01122 334444 3 5555555555
Q ss_pred cccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEE
Q psy467 270 TCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348 (845)
Q Consensus 270 ~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IW 348 (845)
+|++|+.+|.|++||++..+++++++. +. ...++++|+..| |+||
T Consensus 2350 ------------------------llisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw 2395 (2439)
T KOG1064|consen 2350 ------------------------LLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIW 2395 (2439)
T ss_pred ------------------------EEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEE
Confidence 999999999999999999888887775 34 567899999999 9999
Q ss_pred EecCCceEEEecC
Q psy467 349 GWEPARQYDAQPM 361 (845)
Q Consensus 349 Dl~tgk~l~tl~~ 361 (845)
++..-..+.++..
T Consensus 2396 ~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2396 RLSEFGLLHTFPS 2408 (2439)
T ss_pred EccccchhhcCch
Confidence 9998877777764
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.7e-08 Score=119.95 Aligned_cols=139 Identities=20% Similarity=0.310 Sum_probs=121.9
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE-EEcCCCCCeEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR-TLNGHKSSITS 105 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~-~l~~h~~~V~~ 105 (845)
+.-++++|+.-+.|.+|+....+....+.+|.+.|..+.|+-||.++++.+.|.++++|++++.+... ..-+|...|..
T Consensus 144 ~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~ 223 (967)
T KOG0974|consen 144 EELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWA 223 (967)
T ss_pred cEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEE
Confidence 55688899999999999987444444689999999999999999999999999999999999987765 55679999999
Q ss_pred EEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC-CCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 106 VDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-KSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 106 lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~-~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
++|+|+ .+++++.|.+.++|+.+ +..+..+..|. ..++.++..++...+++++.|+.+++
T Consensus 224 ~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~ 284 (967)
T KOG0974|consen 224 CCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKL 284 (967)
T ss_pred EEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhh
Confidence 999998 89999999999999765 55666777765 46899999999899999999999999
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.3e-05 Score=97.91 Aligned_cols=281 Identities=15% Similarity=0.185 Sum_probs=171.1
Q ss_pred CcEEEEEEecCCCCEEEEEe-CCC--eEEEEECCCCe---eEEEec-----CCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 16 ASVNCLALGKKSGQVLATGG-DDK--KVNLWALGKSN---CIMSLS-----GHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs-~DG--~I~IWdl~t~~---~i~~l~-----~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
..+...+|...+...+++.+ ... .|.+....... .+..+. ...+.|.++.+-++...++.+..+|.|.+
T Consensus 22 ~~~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~ 101 (928)
T PF04762_consen 22 LPITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALASGDIIL 101 (928)
T ss_pred cccceEEEecCCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECCceEEE
Confidence 46788888874444433333 222 34444333222 333332 24578999999999999999999999999
Q ss_pred E----ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE------------------------E
Q psy467 85 W----NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI------------------------Y 136 (845)
Q Consensus 85 W----Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l------------------------~ 136 (845)
. +..+.. +.....-...|.+++||||+..|+..+.++++.+.+-. ..++ .
T Consensus 102 ~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~-fd~i~E~~l~~~~~~~~~~VsVGWGkKeT 179 (928)
T PF04762_consen 102 VREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRD-FDPISEVPLDSDDFGESKHVSVGWGKKET 179 (928)
T ss_pred EEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEecc-ceEEEEeecCccccCCCceeeeccCcccC
Confidence 9 555432 22223345679999999999999999999988877531 1111 1
Q ss_pred EEcC------------------------CCCCeEEEEEecCCCEEEEEeC---CCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 137 TYRG------------------------HSKSINSIRFSPDGQWIASGGE---DGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 137 ~~~~------------------------h~~~V~sLafSPdg~~Lasgs~---DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.|++ ....-..++|..||.++|+.+. +|.. ..+++|+-+ |..
T Consensus 180 QF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~----------R~iRVy~Re-G~L 248 (928)
T PF04762_consen 180 QFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSR----------RVIRVYSRE-GEL 248 (928)
T ss_pred ccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCce----------eEEEEECCC-ceE
Confidence 1111 1223456889999999998874 2312 224559876 443
Q ss_pred CCC--CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCC
Q psy467 190 LGT--PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNR 267 (845)
Q Consensus 190 l~~--~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~ 267 (845)
... ....--..++|.|.|++++....+... . ..+-|-.+|- .+
T Consensus 249 ~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~-----~-----------------------------~VvFfErNGL-rh 293 (928)
T PF04762_consen 249 QSTSEPVDGLEGALSWRPSGNLIASSQRLPDR-----H-----------------------------DVVFFERNGL-RH 293 (928)
T ss_pred EeccccCCCccCCccCCCCCCEEEEEEEcCCC-----c-----------------------------EEEEEecCCc-Ee
Confidence 222 124445689999999999987754333 1 1223333332 11
Q ss_pred CCccc---ccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe--EEEEecC-CCCCEEEEEEeCC-CCEEEEE
Q psy467 268 SGTCV---PVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS--LVSTTEK-NSSTIRRLTFSEG-GECLLGG 340 (845)
Q Consensus 268 ~~~~~---~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~--~l~tl~g-h~~~VtslafSpd-G~~Lasg 340 (845)
..-.+ .....|..++|++|+. +||....|. |.+|-..+.. +.+.+.- ....+..+.|+|. ...|...
T Consensus 294 geF~l~~~~~~~~v~~l~Wn~ds~-----iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~ 367 (928)
T PF04762_consen 294 GEFTLRFDPEEEKVIELAWNSDSE-----ILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVL 367 (928)
T ss_pred eeEecCCCCCCceeeEEEECCCCC-----EEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEE
Confidence 11111 2245678999999999 788876555 9999987753 3444442 2334556999995 4456666
Q ss_pred eCCC-EEEEEe
Q psy467 341 DTEG-LKVYGW 350 (845)
Q Consensus 341 s~DG-I~IWDl 350 (845)
+.++ +..+++
T Consensus 368 t~~g~~~~~~~ 378 (928)
T PF04762_consen 368 TSNGQYEIYDF 378 (928)
T ss_pred ecCCcEEEEEE
Confidence 6645 544443
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.9e-07 Score=103.35 Aligned_cols=157 Identities=16% Similarity=0.219 Sum_probs=112.2
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEe--cCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL--SGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l--~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
++|.||.+.|.-+.|+. +.+.|-|...+|.|.+|-+-.+.-...+ ....+-|.+++|+.||..++....||.|.|=.
T Consensus 65 QtLeGH~~sV~vvTWNe-~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGs 143 (1189)
T KOG2041|consen 65 QTLEGHNASVMVVTWNE-NNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGS 143 (1189)
T ss_pred hhhccCcceEEEEEecc-ccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEe
Confidence 57999999999999998 7888999999999999998666433222 23467799999999999999999999999988
Q ss_pred CCCCcEE-EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-------ceEEEE----cCCCCCeEEEEEe---
Q psy467 87 LAVPTVQ-RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-------GCIYTY----RGHSKSINSIRFS--- 151 (845)
Q Consensus 87 l~tg~~v-~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-------~~l~~~----~~h~~~V~sLafS--- 151 (845)
++.++.. +.++ ......+.|++|.+.++.+-.+|.++++|.... .+.... ......|-.+.|.
T Consensus 144 vdGNRIwgKeLk--g~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~ 221 (1189)
T KOG2041|consen 144 VDGNRIWGKELK--GQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGP 221 (1189)
T ss_pred eccceecchhcc--hheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCc
Confidence 8754322 1222 223457889999998888888999999997532 111111 1122234445553
Q ss_pred -----cCCCEEEEEeCCCcEEE
Q psy467 152 -----PDGQWIASGGEDGVVRI 168 (845)
Q Consensus 152 -----Pdg~~Lasgs~DG~I~I 168 (845)
||...|+++..+|.+.+
T Consensus 222 ~~~v~pdrP~lavcy~nGr~Qi 243 (1189)
T KOG2041|consen 222 YQPVPPDRPRLAVCYANGRMQI 243 (1189)
T ss_pred cccCCCCCCEEEEEEcCceehh
Confidence 35556777777666666
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.4e-07 Score=95.59 Aligned_cols=159 Identities=17% Similarity=0.249 Sum_probs=118.5
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC----CCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALG----KSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~----t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t 89 (845)
...+++++.+++ ....|++|-.+|++.-+.+. .....+....|...|..+-|+-..+++++.+.|..+.---.+.
T Consensus 67 mP~~~~~~~y~~-e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~ 145 (404)
T KOG1409|consen 67 MPSPCSAMEYVS-ESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTES 145 (404)
T ss_pred CCCCceEeeeec-cceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeecc
Confidence 457899999998 88899999999999888763 3455666778999999999999999999999988776555555
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEEC--CCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL--RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl--~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
+..+.... .....+++.+.-. +.+.|...|.|....+ ..-..+.++.+|.+.+.+++|.+....|.+|..|..+.
T Consensus 146 ~~~lg~Y~-~~~~~t~~~~d~~--~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi 222 (404)
T KOG1409|consen 146 GNRLGGYN-FETPASALQFDAL--YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVI 222 (404)
T ss_pred CCcccceE-eeccCCCCceeeE--EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceE
Confidence 54432221 0111122222211 5667777777766655 34567889999999999999999999999999999999
Q ss_pred EeeeeccCCceeEEEECCCCcc
Q psy467 168 IGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
+ ||+...+-
T Consensus 223 ~-------------wdigg~~g 231 (404)
T KOG1409|consen 223 M-------------WDIGGRKG 231 (404)
T ss_pred E-------------EeccCCcc
Confidence 9 99875443
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.1e-06 Score=92.21 Aligned_cols=161 Identities=20% Similarity=0.272 Sum_probs=122.9
Q ss_pred CcEEEEEEec--CCCC-EEEEEeCCCeEEEEECCCCeeEEEecCCC------CCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 16 ASVNCLALGK--KSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHS------TPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 16 ~~V~~LafSp--~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l~~h~------~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
+.+..|.|+. .+|. .++-+...|.|.++..........+.+-. ....++.|++.+..++++..+|.+.+-+
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~ 149 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVY 149 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEe
Confidence 4466677753 3556 66677888999999876555444444321 1245778999999999999999999766
Q ss_pred CCCCcEE--EEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECC-CCceEEE-EcCCCCCeEEEEEec-CCCEEEEE
Q psy467 87 LAVPTVQ--RTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLR-RKGCIYT-YRGHSKSINSIRFSP-DGQWIASG 160 (845)
Q Consensus 87 l~tg~~v--~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~-t~~~l~~-~~~h~~~V~sLafSP-dg~~Lasg 160 (845)
....... +.++.|.-+++...|+-.. +.+++|+.|+.+..||++ .++.+.. .+.|...|.++.-+| .+.++++|
T Consensus 150 ~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TG 229 (339)
T KOG0280|consen 150 ETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATG 229 (339)
T ss_pred cceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEe
Confidence 6655444 4788999999999998644 688999999999999998 4455544 456888999998887 67899999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCC-Ccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSL-VHP 189 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~t-g~~ 189 (845)
+.|..|++ ||.++ +++
T Consensus 230 sYDe~i~~-------------~DtRnm~kP 246 (339)
T KOG0280|consen 230 SYDECIRV-------------LDTRNMGKP 246 (339)
T ss_pred ccccceee-------------eehhcccCc
Confidence 99999999 99995 444
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=8.4e-09 Score=119.58 Aligned_cols=160 Identities=20% Similarity=0.278 Sum_probs=124.9
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC--cEEE
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG--SIKI 84 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG--tV~V 84 (845)
..+.|+.|...-+|++|+- +.+.|++|+..|.|++|++.+|......++|..+|+.+.-+.||..+++.+.-. -..+
T Consensus 1093 ~w~~frd~~~~fTc~afs~-~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSG-GTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred cchhhhccccceeeEEeec-CCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHH
Confidence 3567889999999999998 889999999999999999999999999999999999999999999877765533 4789
Q ss_pred EECCC-CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc-C---CCCCeEEEEEecCCCEEEE
Q psy467 85 WNLAV-PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-G---HSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 85 WDl~t-g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-~---h~~~V~sLafSPdg~~Las 159 (845)
|++.+ +...+++. .-.++.|+.....-+.|+......+||+.++..+.++- + .+..-++..|+|+..+++
T Consensus 1172 W~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl- 1246 (1516)
T KOG1832|consen 1172 WDASSTGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL- 1246 (1516)
T ss_pred hccccccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe-
Confidence 99865 45555554 34578888765545566666778999999998776632 1 223347788999888765
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.||. + ||++....
T Consensus 1247 --ndGv--L-------------WDvR~~~a 1259 (1516)
T KOG1832|consen 1247 --NDGV--L-------------WDVRIPEA 1259 (1516)
T ss_pred --eCce--e-------------eeeccHHH
Confidence 4553 4 99987655
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.1e-05 Score=84.85 Aligned_cols=108 Identities=11% Similarity=0.089 Sum_probs=85.2
Q ss_pred ccCceeEEEcCCCCcccceEEEEEeCCC-eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 275 SVSRTSLSILPQSPMLCFILTTSSSADR-TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 275 ~~~I~slafSPdg~~~~~~lLatgs~DG-~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
...|.-..+..+++ -++.|..|| .+-|||..+++. ..+...-+.|.++..+++|++++++.... |.+.|+++
T Consensus 359 ~~~VrY~r~~~~~e-----~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididn 432 (668)
T COG4946 359 KGGVRYRRIQVDPE-----GDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDN 432 (668)
T ss_pred CCceEEEEEccCCc-----ceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecC
Confidence 34455556666666 678888888 899999997754 45555578899999999999999998888 99999999
Q ss_pred CceEEEecCCCCCeEEEEEc-CCceEEEE---------EEEEeeCC
Q psy467 353 ARQYDAQPMGWGKVQDLAVT-GTQLWFRR---------VGTWSHQD 388 (845)
Q Consensus 353 gk~l~tl~~h~~~VtsVafS-dg~lLaaS---------VsiW~~d~ 388 (845)
|.....-+...+-|++.+|| +++++|-+ +.++.+++
T Consensus 433 gnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~ 478 (668)
T COG4946 433 GNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDG 478 (668)
T ss_pred CCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCC
Confidence 98665556677889999999 99999988 55665554
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=9e-06 Score=93.42 Aligned_cols=196 Identities=9% Similarity=-0.067 Sum_probs=122.8
Q ss_pred EeccCCCcEEEEEEecCCCCE-EEEEeC---CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC---CCcE
Q psy467 10 DFMAHGASVNCLALGKKSGQV-LATGGD---DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ---SGSI 82 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~-LaTgs~---DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~---DGtV 82 (845)
.+... +.+....|+| +|+. ++..+. +..|.++|+.+++...... ..+......|+|||+.|+.... +..|
T Consensus 183 ~~~~~-~~~~~p~wSp-DG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~I 259 (419)
T PRK04043 183 VIVKG-GLNIFPKWAN-KEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDI 259 (419)
T ss_pred EEccC-CCeEeEEECC-CCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEE
Confidence 34433 3678899999 7773 664433 3569999998876554433 5556677889999988765432 3568
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC-CC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL-DS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~-DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
.++|+.+++. ..+..+........|+|||+.|+..+. .+ .|.++|+.+++..+.... .. ....|+|||++++.
T Consensus 260 y~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~--~~~~~SPDG~~Ia~ 335 (419)
T PRK04043 260 YLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GK--NNSSVSTYKNYIVY 335 (419)
T ss_pred EEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CC--cCceECCCCCEEEE
Confidence 8889887764 444434433445689999998876653 23 688889887765433221 11 12489999999887
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecC
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h 216 (845)
......- .+......+++.|+.++...............|+|||+.+......
T Consensus 336 ~~~~~~~----~~~~~~~~I~v~d~~~g~~~~LT~~~~~~~p~~SPDG~~I~f~~~~ 388 (419)
T PRK04043 336 SSRETNN----EFGKNTFNLYLISTNSDYIRRLTANGVNQFPRFSSDGGSIMFIKYL 388 (419)
T ss_pred EEcCCCc----ccCCCCcEEEEEECCCCCeEECCCCCCcCCeEECCCCCEEEEEEcc
Confidence 7653210 0000112345588877764322222233468899999987765443
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.7e-07 Score=100.15 Aligned_cols=272 Identities=14% Similarity=0.108 Sum_probs=182.3
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC---CeeEEEecCCCCCeEEEEEcCCCCEEEEEEC-CCcEEEEECC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK---SNCIMSLSGHSTPVESVQFGNGEETLSAGCQ-SGSIKIWNLA 88 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t---~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~-DGtV~VWDl~ 88 (845)
-|.+.|+.+.-.. .+++.+++.||.++.|.-.. -+.+..+..|...|.+++.+-++..+.+++. |..++++|++
T Consensus 7 mhrd~i~hv~~tk--a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvE 84 (558)
T KOG0882|consen 7 MHRDVITHVFPTK--AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVE 84 (558)
T ss_pred cccceeeeEeeeh--hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEee
Confidence 4888888887754 68999999999999998533 2345556778899999999999999999888 9999999999
Q ss_pred CCcEEEEEcC--CCCCeEEEEEccCC--CEEEEE-ECCCeEEEEECCCCc--eEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 89 VPTVQRTLNG--HKSSITSVDFHPYG--DYLCSG-SLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 89 tg~~v~~l~~--h~~~V~~lafspdg--~~Lasg-s~DG~I~IWDl~t~~--~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
+-..+.-++. ..+.+.+ ..++.. ..++++ -.+|.|.++|-.... ....-+-|..+|.++.+.+.+..+++..
T Consensus 85 n~DminmiKL~~lPg~a~w-v~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD 163 (558)
T KOG0882|consen 85 NFDMINMIKLVDLPGFAEW-VTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSID 163 (558)
T ss_pred ccchhhhcccccCCCceEE-ecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeecc
Confidence 8765544432 2222222 222221 134333 357889999976543 2333445899999999999999999988
Q ss_pred CCCcEEEeeeeccCCceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
..|.|.- |.... .+. |.++....++.... +
T Consensus 164 ~~gmVEy-------------Ws~e~~~qf---------------Pr~~l~~~~K~eTd--------L------------- 194 (558)
T KOG0882|consen 164 ISGMVEY-------------WSAEGPFQF---------------PRTNLNFELKHETD--------L------------- 194 (558)
T ss_pred ccceeEe-------------ecCCCcccC---------------ccccccccccccch--------h-------------
Confidence 8899998 87763 111 01110111110000 0
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
---+.. .....++.|+|+|. .+.+-+.|..|+++++++++.++.+..
T Consensus 195 -----------------y~f~K~-----------Kt~pts~Efsp~g~-----qistl~~DrkVR~F~~KtGklvqeiDE 241 (558)
T KOG0882|consen 195 -----------------YGFPKA-----------KTEPTSFEFSPDGA-----QISTLNPDRKVRGFVFKTGKLVQEIDE 241 (558)
T ss_pred -----------------hccccc-----------ccCccceEEccccC-----cccccCcccEEEEEEeccchhhhhhhc
Confidence 000111 12334556666665 788888999999999998876554431
Q ss_pred --------------------------------CC-CCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecCCCCCeE
Q psy467 321 --------------------------------NS-STIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMGWGKVQ 367 (845)
Q Consensus 321 --------------------------------h~-~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~h~~~Vt 367 (845)
|. ..-+.++|...|++|+.|+-=||++.+++++.+.+.+... ..|+
T Consensus 242 ~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~gikvin~~tn~v~ri~gk~-e~ir 320 (558)
T KOG0882|consen 242 VLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILGIKVINLDTNTVVRILGKD-EAIR 320 (558)
T ss_pred cchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeecceeEEEEEeecCeEEEEeccc-hhhh
Confidence 11 2346678999999999999999999999999988877533 3444
Q ss_pred EEE
Q psy467 368 DLA 370 (845)
Q Consensus 368 sVa 370 (845)
-+.
T Consensus 321 ~~~ 323 (558)
T KOG0882|consen 321 FTR 323 (558)
T ss_pred hhh
Confidence 333
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.2e-05 Score=84.12 Aligned_cols=138 Identities=12% Similarity=0.062 Sum_probs=96.2
Q ss_pred CCCeEEEEECCCCeeEEEecCC--CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCC
Q psy467 36 DDKKVNLWALGKSNCIMSLSGH--STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113 (845)
Q Consensus 36 ~DG~I~IWdl~t~~~i~~l~~h--~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~ 113 (845)
.+|+|..||..+|+.+....-- .....+. ..+++..+++++.++.|..||..+|+.+..+.. ...+.... ..++.
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~ 77 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGG 77 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETT
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eeccc
Confidence 3689999999999999887531 1222211 233567788888999999999999999988874 33222222 22455
Q ss_pred EEEEEECCCeEEEEECCCCceEEEE-cCCC---CCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 114 YLCSGSLDSFIKLWDLRRKGCIYTY-RGHS---KSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 114 ~Lasgs~DG~I~IWDl~t~~~l~~~-~~h~---~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.+++++.++.|..+|..+|+.+... .... ..........++..++++..++.+.. +|.++|+.
T Consensus 78 ~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~-------------~d~~tG~~ 144 (238)
T PF13360_consen 78 RVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVA-------------LDPKTGKL 144 (238)
T ss_dssp EEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEE-------------EETTTTEE
T ss_pred ccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEE-------------EecCCCcE
Confidence 7777778899999999999999884 3221 11222333334788888888899999 99999988
|
... |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.9e-05 Score=80.09 Aligned_cols=225 Identities=13% Similarity=0.067 Sum_probs=139.8
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEc-CCCCEEEEEECCCcEEEEECCCCcEEEEEcC
Q psy467 20 CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafS-pdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~ 98 (845)
+++|.+.++.++++.-..+.|..|+..++.... +.... ...+++. +++ .|+.+.. +.+.++|..+++.......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g-~l~v~~~-~~~~~~d~~~g~~~~~~~~ 78 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDG-RLYVADS-GGIAVVDPDTGKVTVLADL 78 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTS-EEEEEET-TCEEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCC-EEEEEEc-CceEEEecCCCcEEEEeec
Confidence 578887677788887788999999998876543 22122 7778888 565 4555544 4556669998865443332
Q ss_pred -----CCCCeEEEEEccCCCEEEEEECC--------CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE-eCCC
Q psy467 99 -----HKSSITSVDFHPYGDYLCSGSLD--------SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG-GEDG 164 (845)
Q Consensus 99 -----h~~~V~~lafspdg~~Lasgs~D--------G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg-s~DG 164 (845)
.....+.+++.++|++.++.... |.|..++.. ++...... .-...+.|+|+||++.|+.+ +..+
T Consensus 79 ~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~ds~~~ 156 (246)
T PF08450_consen 79 PDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVADSFNG 156 (246)
T ss_dssp ETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEETTTT
T ss_pred cCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECCcchheeecccccc
Confidence 33457899999999977765543 567777876 55433333 34567899999999977644 4566
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
.|.. +++..... .+...
T Consensus 157 ~i~~-------------~~~~~~~~-------------------~~~~~------------------------------- 173 (246)
T PF08450_consen 157 RIWR-------------FDLDADGG-------------------ELSNR------------------------------- 173 (246)
T ss_dssp EEEE-------------EEEETTTC-------------------CEEEE-------------------------------
T ss_pred eeEE-------------Eecccccc-------------------ceeee-------------------------------
Confidence 6666 66642221 00000
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~ 324 (845)
.+....... ....-.+++..+|+ +.++....+.|.++|.+ ++.+..+......
T Consensus 174 -----------~~~~~~~~~----------~g~pDG~~vD~~G~-----l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~ 226 (246)
T PF08450_consen 174 -----------RVFIDFPGG----------PGYPDGLAVDSDGN-----LWVADWGGGRIVVFDPD-GKLLREIELPVPR 226 (246)
T ss_dssp -----------EEEEE-SSS----------SCEEEEEEEBTTS------EEEEEETTTEEEEEETT-SCEEEEEE-SSSS
T ss_pred -----------eeEEEcCCC----------CcCCCcceEcCCCC-----EEEEEcCCCEEEEECCC-ccEEEEEcCCCCC
Confidence 000000000 01123345555554 77777788999999988 8888887765568
Q ss_pred EEEEEEe-CCCCEEEEEe
Q psy467 325 IRRLTFS-EGGECLLGGD 341 (845)
Q Consensus 325 VtslafS-pdG~~Lasgs 341 (845)
+++++|. ++.+.|+..+
T Consensus 227 ~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 227 PTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEEEESTTSSEEEEEE
T ss_pred EEEEEEECCCCCEEEEEe
Confidence 9999994 6766666544
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.61 E-value=2e-05 Score=89.12 Aligned_cols=147 Identities=15% Similarity=0.105 Sum_probs=96.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeE--
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSIT-- 104 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~-- 104 (845)
++..+++++.+|.+..+|..+|+.+...... ..+.+.-.. .+..++.++.+|.|..||.++|+.+..+......+.
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~ 181 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLS-SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLR 181 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccC-ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeec
Confidence 3567788888999999999999988766532 222221111 345677778899999999999998887764332111
Q ss_pred ---EEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCC----C---eEEEEEec--CCCEEEEEeCCCcEEEeeee
Q psy467 105 ---SVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK----S---INSIRFSP--DGQWIASGGEDGVVRIGASF 172 (845)
Q Consensus 105 ---~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~----~---V~sLafSP--dg~~Lasgs~DG~I~I~~~~ 172 (845)
..... +..++.+..+|.+..+|.++++.+........ . ...+.-+| .+..+++++.+|.+..
T Consensus 182 ~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a---- 255 (377)
T TIGR03300 182 GSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAA---- 255 (377)
T ss_pred CCCCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEE----
Confidence 11121 34678888899999999999988765432110 0 00111111 2557777888888888
Q ss_pred ccCCceeEEEECCCCccC
Q psy467 173 HLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 173 ~~~~~~I~vWDl~tg~~l 190 (845)
||..+++.+
T Consensus 256 ---------~d~~tG~~~ 264 (377)
T TIGR03300 256 ---------LDLRSGRVL 264 (377)
T ss_pred ---------EECCCCcEE
Confidence 888777653
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.60 E-value=3e-05 Score=83.82 Aligned_cols=144 Identities=13% Similarity=0.082 Sum_probs=106.7
Q ss_pred cEEEEEEecCCCCEEEEEeCCCe-EEEEECCCCeeEEEecCCCCCe--EEEEEcCCCCEEEEEEC-----CCcEEEEECC
Q psy467 17 SVNCLALGKKSGQVLATGGDDKK-VNLWALGKSNCIMSLSGHSTPV--ESVQFGNGEETLSAGCQ-----SGSIKIWNLA 88 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~-I~IWdl~t~~~i~~l~~h~~~V--~sLafSpdg~~LaSgs~-----DGtV~VWDl~ 88 (845)
....++.+|..+..++.+-.-|+ ..+||..+++....+....+.- -.-+||+||++|++.-. .|.|-|||..
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 34467888867778888877774 6789999998887775433222 13579999999998643 5889999999
Q ss_pred -CCcEEEEEcCCCCCeEEEEEccCCCEEEEEE------------------CCCeEEEEECCCCceEEEEc----CCCCCe
Q psy467 89 -VPTVQRTLNGHKSSITSVDFHPYGDYLCSGS------------------LDSFIKLWDLRRKGCIYTYR----GHSKSI 145 (845)
Q Consensus 89 -tg~~v~~l~~h~~~V~~lafspdg~~Lasgs------------------~DG~I~IWDl~t~~~l~~~~----~h~~~V 145 (845)
+.+.+..+..|.-.-..+.+.|||+.|+++. ++.++.+.|..+|+.+.... .|...|
T Consensus 86 ~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSi 165 (305)
T PF07433_consen 86 RGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSI 165 (305)
T ss_pred CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccce
Confidence 6678888887777778899999998777652 23457777888888776643 367788
Q ss_pred EEEEEecCCCEEEEE
Q psy467 146 NSIRFSPDGQWIASG 160 (845)
Q Consensus 146 ~sLafSPdg~~Lasg 160 (845)
..+++.++|..++..
T Consensus 166 RHLa~~~~G~V~~a~ 180 (305)
T PF07433_consen 166 RHLAVDGDGTVAFAM 180 (305)
T ss_pred eeEEecCCCcEEEEE
Confidence 999998887655443
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.60 E-value=8.2e-05 Score=78.99 Aligned_cols=223 Identities=12% Similarity=0.072 Sum_probs=131.5
Q ss_pred EEEEEcC-CCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEc-cCCCEEEEEECCCeEEEEECCCCceEEEEc
Q psy467 62 ESVQFGN-GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFH-PYGDYLCSGSLDSFIKLWDLRRKGCIYTYR 139 (845)
Q Consensus 62 ~sLafSp-dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafs-pdg~~Lasgs~DG~I~IWDl~t~~~l~~~~ 139 (845)
.+++|.+ ++.++++-...+.|..|+..++.... +.... ...+++. ++ ..|+.+...+ +.++|..+++......
T Consensus 3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~-g~l~v~~~~~-~~~~d~~~g~~~~~~~ 77 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPD-GRLYVADSGG-IAVVDPDTGKVTVLAD 77 (246)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTT-SEEEEEETTC-EEEEETTTTEEEEEEE
T ss_pred cceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccC-CEEEEEEcCc-eEEEecCCCcEEEEee
Confidence 4678998 66666666678999999999876543 33222 6677887 55 4566666555 5566998876543333
Q ss_pred C-----CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe
Q psy467 140 G-----HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 140 ~-----h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~ 214 (845)
. .....+.++++++|++.++......... ...+.++.++.. ++. .....
T Consensus 78 ~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~-----~~~g~v~~~~~~-~~~--------------------~~~~~ 131 (246)
T PF08450_consen 78 LPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASG-----IDPGSVYRIDPD-GKV--------------------TVVAD 131 (246)
T ss_dssp EETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTC-----GGSEEEEEEETT-SEE--------------------EEEEE
T ss_pred ccCCCcccCCCceEEEcCCCCEEEEecCCCcccc-----ccccceEEECCC-CeE--------------------EEEec
Confidence 2 3346788999999996666543311000 000112224433 221 11111
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
. ....+.++|+||++. +
T Consensus 132 ~-----------------------------------------------------------~~~pNGi~~s~dg~~----l 148 (246)
T PF08450_consen 132 G-----------------------------------------------------------LGFPNGIAFSPDGKT----L 148 (246)
T ss_dssp E-----------------------------------------------------------ESSEEEEEEETTSSE----E
T ss_pred C-----------------------------------------------------------cccccceEECCcchh----e
Confidence 0 011234555555552 4
Q ss_pred EEEEeCCCeEEEEECCC--C-----eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCe
Q psy467 295 TTSSSADRTVNFWDLEK--F-----SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKV 366 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s--~-----~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~V 366 (845)
+++-+..+.|..|++.. . +.+..+....+..-.++++.+|++.++....+ |.+++-+ |+.+..+......+
T Consensus 149 yv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~ 227 (246)
T PF08450_consen 149 YVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRP 227 (246)
T ss_dssp EEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSE
T ss_pred eecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCE
Confidence 45667788999999853 2 11222233233478899999998777766666 9999977 88888887766799
Q ss_pred EEEEEc--CCceEEE
Q psy467 367 QDLAVT--GTQLWFR 379 (845)
Q Consensus 367 tsVafS--dg~lLaa 379 (845)
++++|. +.+.|.+
T Consensus 228 t~~~fgg~~~~~L~v 242 (246)
T PF08450_consen 228 TNCAFGGPDGKTLYV 242 (246)
T ss_dssp EEEEEESTTSSEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 999996 5454443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.2e-07 Score=105.49 Aligned_cols=211 Identities=20% Similarity=0.277 Sum_probs=144.9
Q ss_pred EEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-------CceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 93 QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-------KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 93 v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-------~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
+..+.+|...|..++--.+.+-+++++.|++|++|.++. ..|..++..|..+|.++.|-.+-++++++ ||.
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~g 805 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGG 805 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCc
Confidence 456778999999888777888999999999999999852 34788899999999999999888877664 678
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
+++ ||.--+..+.+ .......+. +
T Consensus 806 iHl-------------WDPFigr~Laq--------------------~~dapk~~a-----~------------------ 829 (1034)
T KOG4190|consen 806 IHL-------------WDPFIGRLLAQ--------------------MEDAPKEGA-----G------------------ 829 (1034)
T ss_pred cee-------------ecccccchhHh--------------------hhcCcccCC-----C------------------
Confidence 999 99876666211 111000000 0
Q ss_pred hhhccCCCceeEEEcC--CCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec----
Q psy467 246 FATIANPCDYSAIFQP--HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE---- 319 (845)
Q Consensus 246 ~~~~~~~~~~~l~fsp--dg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~---- 319 (845)
..+..-+ +.. .+++.++...+|+++|.+.++-...++
T Consensus 830 ---------~~ikcl~nv~~~----------------------------iliAgcsaeSTVKl~DaRsce~~~E~kVcna 872 (1034)
T KOG4190|consen 830 ---------GNIKCLENVDRH----------------------------ILIAGCSAESTVKLFDARSCEWTCELKVCNA 872 (1034)
T ss_pred ---------ceeEecccCcch----------------------------heeeeccchhhheeeecccccceeeEEeccC
Confidence 1111111 222 044445788999999999887665554
Q ss_pred -CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEcCCceEEEE-----EEE-E-eeCCCC
Q psy467 320 -KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVTGTQLWFRR-----VGT-W-SHQDSG 390 (845)
Q Consensus 320 -gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafSdg~lLaaS-----Vsi-W-~~d~~~ 390 (845)
+.+..+.+++..+.|++++++-.+| |.+.|..+|+.+.......-....++--..+.++.+ +.+ | ..++..
T Consensus 873 ~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldgim 952 (1034)
T KOG4190|consen 873 PGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDGIM 952 (1034)
T ss_pred CCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCCee
Confidence 3356789999999999999999999 999999999988776654444433333333444433 566 7 445554
Q ss_pred CccccCCC
Q psy467 391 FSTLDSYS 398 (845)
Q Consensus 391 ~~~~~~~~ 398 (845)
.-+.+|-|
T Consensus 953 h~q~kppp 960 (1034)
T KOG4190|consen 953 HLQDKPPP 960 (1034)
T ss_pred eeccCCCC
Confidence 44444444
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=98.56 E-value=0.0001 Score=76.62 Aligned_cols=138 Identities=17% Similarity=0.173 Sum_probs=100.8
Q ss_pred EEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCC
Q psy467 22 ALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS 101 (845)
Q Consensus 22 afSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~ 101 (845)
...++..++++.|+..+.+.--|..+|+.+..-. -...|.+-+.- -|++++.|+..|.+.+.+..+|.+...+.....
T Consensus 17 VV~~dskT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~ 94 (354)
T KOG4649|consen 17 VVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILET 94 (354)
T ss_pred EEecCCceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhh
Confidence 3444466889999999999999999998876543 23344443333 477899999999999999999988877763322
Q ss_pred CeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec-CCCEEEEEe
Q psy467 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGG 161 (845)
Q Consensus 102 ~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP-dg~~Lasgs 161 (845)
-=......+++..+..|+.|++.+..|.++..++.+.+...+...+-+..| ++.+.++..
T Consensus 95 vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t 155 (354)
T KOG4649|consen 95 VKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAIT 155 (354)
T ss_pred hccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEec
Confidence 112234567899999999999999999999999999876655555566666 444444433
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.3e-05 Score=83.28 Aligned_cols=228 Identities=13% Similarity=0.060 Sum_probs=142.6
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEE-EEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v-~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~ 146 (845)
.-.+||.|+..|...+|...+.+.. .....|...|+-+.=..+ .-.+..++.|.++++.++.-+..........-.+.
T Consensus 83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~n 162 (344)
T KOG4532|consen 83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQN 162 (344)
T ss_pred cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeecccccee
Confidence 3468999999999999999876433 233334443332221112 22466778888888888864433322221223378
Q ss_pred EEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE-EecCCCCCcccee
Q psy467 147 SIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS-FTKGRPGGTKAKI 225 (845)
Q Consensus 147 sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~-~~~h~~~~~~~~i 225 (845)
++++++|++++++.+....|.. |.+..... ++.. .......
T Consensus 163 s~~~snd~~~~~~Vgds~~Vf~-------------y~id~~se-------------------y~~~~~~a~t~D------ 204 (344)
T KOG4532|consen 163 SLHYSNDPSWGSSVGDSRRVFR-------------YAIDDESE-------------------YIENIYEAPTSD------ 204 (344)
T ss_pred eeEEcCCCceEEEecCCCcceE-------------EEeCCccc-------------------eeeeeEecccCC------
Confidence 8999999999999999888888 77654332 0111 0000000
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
...+..|+.... .+|++..||++.
T Consensus 205 ---------------------------~gF~~S~s~~~~-----------------------------~FAv~~Qdg~~~ 228 (344)
T KOG4532|consen 205 ---------------------------HGFYNSFSENDL-----------------------------QFAVVFQDGTCA 228 (344)
T ss_pred ---------------------------CceeeeeccCcc-----------------------------eEEEEecCCcEE
Confidence 004455555555 899999999999
Q ss_pred EEECCCCeEE-E----EecCCCCCEEEEEEeCCCC--EEEEEeCCC-EEEEEecCCceEEEe-------cCCC-CCeEEE
Q psy467 306 FWDLEKFSLV-S----TTEKNSSTIRRLTFSEGGE--CLLGGDTEG-LKVYGWEPARQYDAQ-------PMGW-GKVQDL 369 (845)
Q Consensus 306 IWDl~s~~~l-~----tl~gh~~~VtslafSpdG~--~Lasgs~DG-I~IWDl~tgk~l~tl-------~~h~-~~VtsV 369 (845)
|||++..... . +-..|.+.+..+.|++.|. +|+..-.-+ +.+.|+.+++-.+.+ ..|. ..|..-
T Consensus 229 I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt 308 (344)
T KOG4532|consen 229 IYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGT 308 (344)
T ss_pred EEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccc
Confidence 9999875322 2 2235889999999998664 344443344 999999987654433 2233 348888
Q ss_pred EEc-CCceEEEE----EEEEeeCCCC
Q psy467 370 AVT-GTQLWFRR----VGTWSHQDSG 390 (845)
Q Consensus 370 afS-dg~lLaaS----VsiW~~d~~~ 390 (845)
.|+ ++.-+.++ +.-|.++.+.
T Consensus 309 ~f~~~n~s~~v~~e~~~ae~ni~srs 334 (344)
T KOG4532|consen 309 NFNNENESNDVKNELQGAEYNILSRS 334 (344)
T ss_pred cccCCCcccccccchhhheeeccccc
Confidence 888 55555444 6667655443
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=9.2e-07 Score=96.26 Aligned_cols=107 Identities=12% Similarity=0.128 Sum_probs=72.8
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCc----EEEEEcCCCCCeEEEEEccCCCEEEEEECC---CeEEEEECCCC
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPT----VQRTLNGHKSSITSVDFHPYGDYLCSGSLD---SFIKLWDLRRK 132 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~----~v~~l~~h~~~V~~lafspdg~~Lasgs~D---G~I~IWDl~t~ 132 (845)
.+..+..++++++||++..+....+++..... .+.... -...-+.+.|..+......+..- ..+.+|....+
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~ 142 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSG 142 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeeccccc
Confidence 34555678889999999888887777776433 222222 22233455665555555555444 45556655543
Q ss_pred ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 133 ~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+...+-+|-..+..++|+||+++++++..|..|++
T Consensus 143 -~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRv 177 (390)
T KOG3914|consen 143 -RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRV 177 (390)
T ss_pred -CcchhhhhhhhhheeeecCCCCEEEEecCCceEEE
Confidence 33445579999999999999999999999999999
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.4e-05 Score=98.00 Aligned_cols=156 Identities=16% Similarity=0.167 Sum_probs=104.2
Q ss_pred EEEEEEecCCCCEEEEEe-CCCeEEEEECCCCeeEEEecCC-----------------CCCeEEEEEcC-CCCEEEEEEC
Q psy467 18 VNCLALGKKSGQVLATGG-DDKKVNLWALGKSNCIMSLSGH-----------------STPVESVQFGN-GEETLSAGCQ 78 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs-~DG~I~IWdl~t~~~i~~l~~h-----------------~~~V~sLafSp-dg~~LaSgs~ 78 (845)
-..+++++ +++.|+++. .++.|+++|..++. +.++.+- -..-..++|+| ++..+++.+.
T Consensus 626 P~GIavd~-~gn~LYVaDt~n~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~ 703 (1057)
T PLN02919 626 PQGLAYNA-KKNLLYVADTENHALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAG 703 (1057)
T ss_pred CcEEEEeC-CCCEEEEEeCCCceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECC
Confidence 57889988 666555554 45689999987654 3333210 12346899999 5556667677
Q ss_pred CCcEEEEECCCCcEEEEEcCC---------------CCCeEEEEEccCCCEEE-EEECCCeEEEEECCCCceEEEEc---
Q psy467 79 SGSIKIWNLAVPTVQRTLNGH---------------KSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYR--- 139 (845)
Q Consensus 79 DGtV~VWDl~tg~~v~~l~~h---------------~~~V~~lafspdg~~La-sgs~DG~I~IWDl~t~~~l~~~~--- 139 (845)
++.|++||..++... .+.+. -.....++++|+++.|+ +-+.++.|++||+.++.......
T Consensus 704 ~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~ 782 (1057)
T PLN02919 704 QHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDP 782 (1057)
T ss_pred CCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEeccc
Confidence 899999999876543 22111 12345799999998555 44567899999998765321110
Q ss_pred ----------CC--------CCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 140 ----------GH--------SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 140 ----------~h--------~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.. -....+++++++|+.+++-..++.|++ ||..++..
T Consensus 783 ~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrv-------------iD~~tg~v 837 (1057)
T PLN02919 783 TFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKK-------------LDPATKRV 837 (1057)
T ss_pred ccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEE-------------EECCCCeE
Confidence 00 113468899999988888888889999 99877654
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.9e-05 Score=80.80 Aligned_cols=245 Identities=12% Similarity=0.008 Sum_probs=154.1
Q ss_pred EEEEEecC----CCCEEEEEeCCCeEEEEECCCCee-EEEecCCCCCeEEEEEcCC-CCEEEEEECCCcEEEEECCCCcE
Q psy467 19 NCLALGKK----SGQVLATGGDDKKVNLWALGKSNC-IMSLSGHSTPVESVQFGNG-EETLSAGCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 19 ~~LafSp~----dg~~LaTgs~DG~I~IWdl~t~~~-i~~l~~h~~~V~sLafSpd-g~~LaSgs~DGtV~VWDl~tg~~ 92 (845)
+.|.|-|. .-.+||.||..|...+|...+.+. ......|...|+-+.=..+ .-.+..++.|.++++.+++.+..
T Consensus 71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~ 150 (344)
T KOG4532|consen 71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSN 150 (344)
T ss_pred ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcc
Confidence 34555551 235899999999999999976543 3334445554443322222 23456677888888888875543
Q ss_pred EEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceE-E-EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe
Q psy467 93 QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCI-Y-TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169 (845)
Q Consensus 93 v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l-~-~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~ 169 (845)
...+....-.+.++++++|++++++.+....|..|.+... +.+ . ........=.+..|+.....+|++..||++.|
T Consensus 151 ~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I- 229 (344)
T KOG4532|consen 151 KFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAI- 229 (344)
T ss_pred cceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEE-
Confidence 3322211123788999999999999999999999998643 222 2 22233444567889998889999999999999
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
||++.... .........+
T Consensus 230 ------------~DVR~~~t--------------------pm~~~sstrp------------------------------ 247 (344)
T KOG4532|consen 230 ------------YDVRNMAT--------------------PMAEISSTRP------------------------------ 247 (344)
T ss_pred ------------EEeccccc--------------------chhhhcccCC------------------------------
Confidence 99987554 1111000000
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec-------CCC
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE-------KNS 322 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~-------gh~ 322 (845)
.+.+.++.+.|++.|..- +|...-.-+.+.+.|+++++..+.+. .|.
T Consensus 248 -----------------------~hnGa~R~c~Fsl~g~lD---LLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~ 301 (344)
T KOG4532|consen 248 -----------------------HHNGAFRVCRFSLYGLLD---LLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHN 301 (344)
T ss_pred -----------------------CCCCceEEEEecCCCcce---EEEEecCcceEEEEEcccCceeeEEecCcccccccc
Confidence 011223334444333211 56666667889999999886554433 233
Q ss_pred -CCEEEEEEeCCCCEEEEEeCCCEEEEEecC
Q psy467 323 -STIRRLTFSEGGECLLGGDTEGLKVYGWEP 352 (845)
Q Consensus 323 -~~VtslafSpdG~~Lasgs~DGI~IWDl~t 352 (845)
..|..-+|+.++.-+.+.+++.+.=|++..
T Consensus 302 tq~ifgt~f~~~n~s~~v~~e~~~ae~ni~s 332 (344)
T KOG4532|consen 302 TQHIFGTNFNNENESNDVKNELQGAEYNILS 332 (344)
T ss_pred ccccccccccCCCcccccccchhhheeeccc
Confidence 338888888888888887777655566554
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.8e-05 Score=78.70 Aligned_cols=103 Identities=14% Similarity=0.123 Sum_probs=65.4
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCC--cEEEEEcCC---CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE
Q psy467 64 VQFGNGEETLSAGCQSGSIKIWNLAVP--TVQRTLNGH---KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 64 LafSpdg~~LaSgs~DGtV~VWDl~tg--~~v~~l~~h---~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~ 138 (845)
++.+.+|+.||.. .|..|.|-..++. ..+.+.+.. ...=+-++|+||+..||.+...|+|+++|+.. ..+..+
T Consensus 3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I 80 (282)
T PF15492_consen 3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVI 80 (282)
T ss_pred eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEc
Confidence 5667888888876 6777777766543 233333222 22346799999999999999999999999964 444444
Q ss_pred cC-------CCCCeEEEEEecCC------CEEEEEeCCCcEEE
Q psy467 139 RG-------HSKSINSIRFSPDG------QWIASGGEDGVVRI 168 (845)
Q Consensus 139 ~~-------h~~~V~sLafSPdg------~~Lasgs~DG~I~I 168 (845)
.. ....|..|.|.+.. ..|++...+|.++-
T Consensus 81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~S 123 (282)
T PF15492_consen 81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRS 123 (282)
T ss_pred CcccccCCccccceeeeEeeccccccccceeEEEEeccceeee
Confidence 32 12345556664421 13445555565555
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.9e-06 Score=89.00 Aligned_cols=160 Identities=15% Similarity=0.217 Sum_probs=100.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE-EEecCCCCCeEEEEEcCCCCEEEEEE-----CCCc
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI-MSLSGHSTPVESVQFGNGEETLSAGC-----QSGS 81 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i-~~l~~h~~~V~sLafSpdg~~LaSgs-----~DGt 81 (845)
++.+..|++.-.+-+.+- .++-+++++.||.+.+++.+.-..+ +++......-.+.+....++.|.++. .-+.
T Consensus 82 ~~~~a~~sep~p~~~~s~-~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~ 160 (319)
T KOG4714|consen 82 FKVLAKNSEIDPNDACTM-TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDN 160 (319)
T ss_pred eeeeeccCCCCCcccccc-cCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccc
Confidence 344445555444444443 5678999999999999997641111 11111111112223333455554432 1344
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCce-EEEEcCCCCCeEEEEEec-CCCEEE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGC-IYTYRGHSKSINSIRFSP-DGQWIA 158 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~-l~~~~~h~~~V~sLafSP-dg~~La 158 (845)
.+.|+++..+....-......|++++-+|.. +.+++|+.||.+.+||.+.... ...++.|..+++.+-|+| ++..|+
T Consensus 161 ~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lf 240 (319)
T KOG4714|consen 161 FYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLF 240 (319)
T ss_pred eeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchhee
Confidence 5566665332221111122348999999955 5678889999999999987643 345678999999999999 677899
Q ss_pred EEeCCCcEEE
Q psy467 159 SGGEDGVVRI 168 (845)
Q Consensus 159 sgs~DG~I~I 168 (845)
++++||.+..
T Consensus 241 t~sedGslw~ 250 (319)
T KOG4714|consen 241 TCSEDGSLWH 250 (319)
T ss_pred EecCCCcEEE
Confidence 9999999999
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00028 Score=76.52 Aligned_cols=101 Identities=15% Similarity=0.175 Sum_probs=77.1
Q ss_pred CeEEEEEcC-CCCEEEEEECCCc-EEEEECCCCcEEEEEcCCCCCeE--EEEEccCCCEEEEEEC-----CCeEEEEECC
Q psy467 60 PVESVQFGN-GEETLSAGCQSGS-IKIWNLAVPTVQRTLNGHKSSIT--SVDFHPYGDYLCSGSL-----DSFIKLWDLR 130 (845)
Q Consensus 60 ~V~sLafSp-dg~~LaSgs~DGt-V~VWDl~tg~~v~~l~~h~~~V~--~lafspdg~~Lasgs~-----DG~I~IWDl~ 130 (845)
....++.+| ....++.+-.-|+ ..+||..+++....+....+.-. .-.|++||++|++.-. .|.|-|||..
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 345678888 5556666666554 78999999998887764443321 4689999999998643 4789999998
Q ss_pred -CCceEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 131 -RKGCIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 131 -t~~~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
+.+.+..+..+.-....+.+.|||+.|+++
T Consensus 86 ~~~~ri~E~~s~GIGPHel~l~pDG~tLvVA 116 (305)
T PF07433_consen 86 RGYRRIGEFPSHGIGPHELLLMPDGETLVVA 116 (305)
T ss_pred CCcEEEeEecCCCcChhhEEEcCCCCEEEEE
Confidence 667788888887778889999999887776
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.0001 Score=84.01 Aligned_cols=248 Identities=14% Similarity=0.050 Sum_probs=150.9
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEE-EEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEE-
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES-VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITS- 105 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~s-LafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~- 105 (845)
+..++.++.+|.+.-+|.++|+.+.+..... .+.+ ... .+..++.++.+|.|..+|.++|+.+.........+..
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~ 196 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAG-EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLR 196 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCC-ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCccccc
Confidence 4567778889999999999999888776432 2221 111 2456777778999999999999998887632111100
Q ss_pred EEEcc--CCCEEEEEECCCeEEEEECCCCceEEEEcCCCC-------CeEEEEEec--CCCEEEEEeCCCcEEEeeeecc
Q psy467 106 VDFHP--YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK-------SINSIRFSP--DGQWIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 106 lafsp--dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~-------~V~sLafSP--dg~~Lasgs~DG~I~I~~~~~~ 174 (845)
..-+| .+..++.++.+|.+..+|..+++.+........ ....+.-+| .+..+++++.+|.+..
T Consensus 197 ~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~a------ 270 (394)
T PRK11138 197 GESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVA------ 270 (394)
T ss_pred CCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEE------
Confidence 00111 134577788899999999999987766532110 011111222 2456666777888888
Q ss_pred CCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCc
Q psy467 175 TNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCD 254 (845)
Q Consensus 175 ~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~ 254 (845)
+|..+|+. +-... ... .
T Consensus 271 -------ld~~tG~~--------------------~W~~~--~~~-------~--------------------------- 287 (394)
T PRK11138 271 -------LDLRSGQI--------------------VWKRE--YGS-------V--------------------------- 287 (394)
T ss_pred -------EECCCCCE--------------------EEeec--CCC-------c---------------------------
Confidence 88888776 11100 000 0
Q ss_pred eeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC-CCEEEEEEeCC
Q psy467 255 YSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS-STIRRLTFSEG 333 (845)
Q Consensus 255 ~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~-~~VtslafSpd 333 (845)
..+.. .+. .++.++.+|.+..+|..+++.+.....-. ....+... .
T Consensus 288 ~~~~~--~~~-----------------------------~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~ 334 (394)
T PRK11138 288 NDFAV--DGG-----------------------------RIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--Y 334 (394)
T ss_pred cCcEE--ECC-----------------------------EEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--E
Confidence 00001 111 56667789999999999998766543211 11222222 2
Q ss_pred CCEEEEEeCCC-EEEEEecCCceEEEecCCCCCe-EEEEEcCCceEEEE
Q psy467 334 GECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKV-QDLAVTGTQLWFRR 380 (845)
Q Consensus 334 G~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~V-tsVafSdg~lLaaS 380 (845)
+..|+.++.+| |.++|..+|+.+.........+ ....+.++++++.+
T Consensus 335 ~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t 383 (394)
T PRK11138 335 NGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVVADDKLLIQA 383 (394)
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEEECCEEEEEe
Confidence 55788889999 9999999999887765443333 33444566666655
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.3e-06 Score=89.00 Aligned_cols=76 Identities=17% Similarity=0.355 Sum_probs=57.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc-----EEEEEcCCC------------CCeEEEEEccCC--CEEEE
Q psy467 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT-----VQRTLNGHK------------SSITSVDFHPYG--DYLCS 117 (845)
Q Consensus 57 h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~-----~v~~l~~h~------------~~V~~lafspdg--~~Las 117 (845)
....|+++.|...|.||++|...|.|.++.-+... ....|++|. ..|..+.|..++ ..++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 35679999999999999999999999999865432 223355554 247788887755 46777
Q ss_pred EECCCeEEEEECCCC
Q psy467 118 GSLDSFIKLWDLRRK 132 (845)
Q Consensus 118 gs~DG~I~IWDl~t~ 132 (845)
.+.|.+|++|.+...
T Consensus 105 stNdktiKlWKiyek 119 (460)
T COG5170 105 STNDKTIKLWKIYEK 119 (460)
T ss_pred ecCCceeeeeeeecc
Confidence 888999999998643
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.7e-07 Score=94.97 Aligned_cols=147 Identities=27% Similarity=0.365 Sum_probs=117.3
Q ss_pred EEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-----cEEEEEcCCCCCeEEE
Q psy467 32 ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-----TVQRTLNGHKSSITSV 106 (845)
Q Consensus 32 aTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg-----~~v~~l~~h~~~V~~l 106 (845)
++.+.+..|-+-|+++|-. ..+. ..+.|.++.|...++.+..|+..|.|...|++.+ .+...+. |...|+++
T Consensus 228 fs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtsl 304 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSL 304 (425)
T ss_pred ecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhh
Confidence 4555666788889887643 2333 5678999999998999999999999999999864 3445555 88999999
Q ss_pred EEcc-CCCEEEEEECCCeEEEEECCCCce---EEEEcCCCCCeEE--EEEecCCCEEEEEeCCCcEEEeeeeccCCceeE
Q psy467 107 DFHP-YGDYLCSGSLDSFIKLWDLRRKGC---IYTYRGHSKSINS--IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIH 180 (845)
Q Consensus 107 afsp-dg~~Lasgs~DG~I~IWDl~t~~~---l~~~~~h~~~V~s--LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~ 180 (845)
..-. ++.+|++.+.+|.|++||.+.-++ +.++.+|...-.- +-..+....+++++.|...+|
T Consensus 305 q~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRi------------ 372 (425)
T KOG2695|consen 305 QILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRI------------ 372 (425)
T ss_pred hhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEE------------
Confidence 8877 788999999999999999987777 8888888654332 344556778889999999999
Q ss_pred EEECCCCccCCCCC
Q psy467 181 VVDLSLVHPLGTPP 194 (845)
Q Consensus 181 vWDl~tg~~l~~~~ 194 (845)
|.++.++.+...+
T Consensus 373 -Wsl~~ghLl~tip 385 (425)
T KOG2695|consen 373 -WSLDSGHLLCTIP 385 (425)
T ss_pred -EecccCceeeccC
Confidence 9999999876655
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.5e-06 Score=100.01 Aligned_cols=143 Identities=24% Similarity=0.379 Sum_probs=110.2
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t 89 (845)
+.||+.+|+.+.|+|+....+|+++.|-.+..||+.+.. .+..+..-...-..++|+-....+.+.+..+.|.+||.+.
T Consensus 110 lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~ 189 (1081)
T KOG0309|consen 110 LHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRK 189 (1081)
T ss_pred EecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccC
Confidence 679999999999999999999999999999999997653 3444444455667899997555555566788999999987
Q ss_pred C-cEEEEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCce--EEEEcCCCCCeEEEEEecCC
Q psy467 90 P-TVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGC--IYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 90 g-~~v~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~--l~~~~~h~~~V~sLafSPdg 154 (845)
| .++..+++|...|..++|..- ...+.+.+.||+|+.||...... .+.. ....+|+--++-|-|
T Consensus 190 gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~v-tt~~piw~~r~~Pfg 257 (1081)
T KOG0309|consen 190 GSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTV-TTNFPIWRGRYLPFG 257 (1081)
T ss_pred CCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceec-cccCcceeccccccC
Confidence 6 677888999999999998753 35688999999999999864332 2222 245567777777744
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.34 E-value=0.00021 Score=74.78 Aligned_cols=114 Identities=12% Similarity=0.119 Sum_probs=81.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE-cCCC---CC
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL-NGHK---SS 102 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l-~~h~---~~ 102 (845)
++..+++++.++.|..||..+|+.+.+... ...+.... ..++..+++++.++.|..+|..+|+.+... .... ..
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~ 112 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGV 112 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCST
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeecccccccccc
Confidence 456677778999999999999999888774 22222212 224566777778899999999999998884 3221 11
Q ss_pred eEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC
Q psy467 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142 (845)
Q Consensus 103 V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~ 142 (845)
........++..++++..++.|..+|+++|+.+.......
T Consensus 113 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 113 RSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGE 152 (238)
T ss_dssp B--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESST
T ss_pred ccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCC
Confidence 2223333347889999999999999999999998886543
|
... |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.1e-05 Score=89.07 Aligned_cols=255 Identities=13% Similarity=0.109 Sum_probs=159.4
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCC------------CEEEEEECCCeEE
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG------------DYLCSGSLDSFIK 125 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg------------~~Lasgs~DG~I~ 125 (845)
...-.++.|+|.| .||.|+ ...|.+.|..+-+.++.+..|...|+.+.|.|-. -.||++...|.|.
T Consensus 15 ~sN~~A~Dw~~~G-LiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIi 92 (1062)
T KOG1912|consen 15 RSNRNAADWSPSG-LIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRII 92 (1062)
T ss_pred cccccccccCccc-eEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEE
Confidence 3346778899876 566664 6689999999999999999999999999998731 2567788889999
Q ss_pred EEECCCCceEEEEcCCCCCeEEEEEec---CC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC--CCCCc
Q psy467 126 LWDLRRKGCIYTYRGHSKSINSIRFSP---DG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP--PQYTS 199 (845)
Q Consensus 126 IWDl~t~~~l~~~~~h~~~V~sLafSP---dg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~--~~~i~ 199 (845)
+||...+..+..+..+..++..++|-+ +. .+|++-.....+.+ |+..+|+.+.... .....
T Consensus 93 l~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvL-------------wntdtG~k~Wk~~ys~~iLs 159 (1062)
T KOG1912|consen 93 LVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVL-------------WNTDTGEKFWKYDYSHEILS 159 (1062)
T ss_pred EEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEE-------------EEccCCceeeccccCCccee
Confidence 999999988888988999999999987 33 45666666778888 9888887754432 22233
Q ss_pred ceeecCCCCeEEEEecCCCCCccceeeEeeecccccc-cccccchhhhhhccCCCceeEEEcCCCC-cC------CCC--
Q psy467 200 SVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES-EDQAGEEELFATIANPCDYSAIFQPHRS-LN------RSG-- 269 (845)
Q Consensus 200 svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~-~~~~~~~~l~~~~~~~~~~~l~fspdg~-~~------~~~-- 269 (845)
++.+.|=...-.++.+..+. +......... .+..+ ..+.+..+.. .. ..+
T Consensus 160 ~f~~DPfd~rh~~~l~s~g~-------vl~~~~l~~sep~~pg-------------k~~qI~sd~Sdl~~lere~at~ns 219 (1062)
T KOG1912|consen 160 CFRVDPFDSRHFCVLGSKGF-------VLSCKDLGLSEPDVPG-------------KEFQITSDHSDLAHLERETATGNS 219 (1062)
T ss_pred eeeeCCCCcceEEEEccCce-------EEEEeccCCCCCCCCc-------------eeEEEecCccchhhhhhhhhcccc
Confidence 34444422222222221111 1000000000 00000 1111111100 00 000
Q ss_pred --cccc---cccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCC--CEEEEEeC
Q psy467 270 --TCVP---VSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG--ECLLGGDT 342 (845)
Q Consensus 270 --~~~~---~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG--~~Lasgs~ 342 (845)
.+.. ...-...++|+|.-+. .++.. ....+.++|++-..++.+..-..+.+.-+.|-|++ ..|++.-.
T Consensus 220 ~ts~~~sa~fity~a~faf~p~~rn----~lfi~-~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~ 294 (1062)
T KOG1912|consen 220 TTSTPASAYFITYCAQFAFSPHWRN----ILFIT-FPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHS 294 (1062)
T ss_pred ccCCCcchhHHHHHHhhhcChhhhc----eEEEE-eccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEec
Confidence 0000 0001235678888663 34333 46679999999888888877666777777777764 57999999
Q ss_pred CC-EEEEEecC
Q psy467 343 EG-LKVYGWEP 352 (845)
Q Consensus 343 DG-I~IWDl~t 352 (845)
|| +.||-.+.
T Consensus 295 nG~ltirvrk~ 305 (1062)
T KOG1912|consen 295 NGRLTIRVRKE 305 (1062)
T ss_pred CCeEEEEEeec
Confidence 99 98887654
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.3e-06 Score=96.31 Aligned_cols=151 Identities=22% Similarity=0.383 Sum_probs=114.2
Q ss_pred EEEEEEecC-CCCEEEEEeCCCeEEEEECCC---CeeEEEecCCCCCeEEEEEcCC-CCEEEEEECCCcEEEEECCCC-c
Q psy467 18 VNCLALGKK-SGQVLATGGDDKKVNLWALGK---SNCIMSLSGHSTPVESVQFGNG-EETLSAGCQSGSIKIWNLAVP-T 91 (845)
Q Consensus 18 V~~LafSp~-dg~~LaTgs~DG~I~IWdl~t---~~~i~~l~~h~~~V~sLafSpd-g~~LaSgs~DGtV~VWDl~tg-~ 91 (845)
|-.+.|+|. ...+-++......-.+|++.. ...-..+.+|...|+.+.|+|. ...+++++-|..|..||+++. .
T Consensus 70 vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~ 149 (1081)
T KOG0309|consen 70 VADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR 149 (1081)
T ss_pred hcceecccCCCCceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCc
Confidence 556677663 234555555566777999853 2344567889999999999985 457899999999999999885 4
Q ss_pred EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEec-CCCEEEEEeCCCcEEE
Q psy467 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168 (845)
Q Consensus 92 ~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I 168 (845)
.+..+..-......++|+-....+++.+....|.+||.+.| .++..+++|...|..++|.. ....+.+++.||+|++
T Consensus 150 p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkf 228 (1081)
T KOG0309|consen 150 PFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKF 228 (1081)
T ss_pred ceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceee
Confidence 45555444455678999876666667777888999999865 57888899988999998875 2345788999999999
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.6e-05 Score=83.97 Aligned_cols=254 Identities=21% Similarity=0.341 Sum_probs=160.5
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-----eEEEecCCC------------CCeEEEEEcCCCC--EEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-----CIMSLSGHS------------TPVESVQFGNGEE--TLSA 75 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-----~i~~l~~h~------------~~V~sLafSpdg~--~LaS 75 (845)
...|+++.|.. .|.||++|...|.|.+|.-+... ....+++|. ..|..+.|..++. .++.
T Consensus 26 ad~ItaVefd~-tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 26 ADKITAVEFDE-TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred cceeeEEEecc-ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 45799999988 99999999999999999764322 233455553 4578888876543 4555
Q ss_pred EECCCcEEEEECCCCc-------------------E------------------E-----EEE-cCCCCCeEEEEEccCC
Q psy467 76 GCQSGSIKIWNLAVPT-------------------V------------------Q-----RTL-NGHKSSITSVDFHPYG 112 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~-------------------~------------------v-----~~l-~~h~~~V~~lafspdg 112 (845)
.+.|.+|++|.+.... + + +.. ..|...+.++.|+.|.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 6689999999875320 0 0 001 2456667889999888
Q ss_pred CEEEEEECCCeEEEEECCCCc---eEEEEcCCC-----CCeEEEEEecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEE
Q psy467 113 DYLCSGSLDSFIKLWDLRRKG---CIYTYRGHS-----KSINSIRFSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVD 183 (845)
Q Consensus 113 ~~Lasgs~DG~I~IWDl~t~~---~l~~~~~h~-----~~V~sLafSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWD 183 (845)
..++++. |=.|.+|++.-.. .+..++.|. .-|++..|+|. .+.+.-.+..|.|++ -|
T Consensus 185 et~lSaD-dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl-------------~D 250 (460)
T COG5170 185 ETLLSAD-DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKL-------------ND 250 (460)
T ss_pred heeeecc-ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEe-------------hh
Confidence 8777764 6679999886332 233344443 35788899994 456666777899999 88
Q ss_pred CCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCC
Q psy467 184 LSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHR 263 (845)
Q Consensus 184 l~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg 263 (845)
++....-... ...+.....+ + ...|
T Consensus 251 lRq~alcdn~----------------~klfe~~~D~-------v----------------------------~~~f---- 275 (460)
T COG5170 251 LRQSALCDNS----------------KKLFELTIDG-------V----------------------------DVDF---- 275 (460)
T ss_pred hhhhhhccCc----------------hhhhhhccCc-------c----------------------------cchh----
Confidence 8754430000 0000000000 0 0000
Q ss_pred CcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-CeEEEEecCCC------------CCE---EE
Q psy467 264 SLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-FSLVSTTEKNS------------STI---RR 327 (845)
Q Consensus 264 ~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~~~l~tl~gh~------------~~V---ts 327 (845)
.......|..+.|+++|+ ++++-+. -+|+|||++. ..++.++.-|. ..| ..
T Consensus 276 -------f~eivsSISD~kFs~ngr-----yIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFe 342 (460)
T COG5170 276 -------FEEIVSSISDFKFSDNGR-----YILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFE 342 (460)
T ss_pred -------HHHHhhhhcceEEcCCCc-----EEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEE
Confidence 011234456667777776 7776543 5899999975 45777775442 233 35
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
+.||-|.+.+.+|+... .-+|-..
T Consensus 343 isfSgd~~~v~sgsy~NNfgiyp~~ 367 (460)
T COG5170 343 ISFSGDDKHVLSGSYSNNFGIYPTD 367 (460)
T ss_pred EEecCCcccccccccccceeeeccc
Confidence 77888999999999877 6666543
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.8e-05 Score=83.06 Aligned_cols=269 Identities=13% Similarity=0.130 Sum_probs=148.7
Q ss_pred EEEEECCCCeeEEEecCCCCCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCC-CEEEE
Q psy467 40 VNLWALGKSNCIMSLSGHSTPVESVQFGNGEE-TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG-DYLCS 117 (845)
Q Consensus 40 I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg-~~Las 117 (845)
+++.+..+.+....+.+|...|..++|||..+ ++..++.+..|.|.|+++..++..+..+ ..+++++|.-|. ++++.
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa 253 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA 253 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence 34444444444455567888999999999777 6888899999999999999998888877 779999998866 67888
Q ss_pred EECCCeEEEEECCCCc-eEEEEcC--CCCCeEEEEE------ecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCc
Q psy467 118 GSLDSFIKLWDLRRKG-CIYTYRG--HSKSINSIRF------SPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 118 gs~DG~I~IWDl~t~~-~l~~~~~--h~~~V~sLaf------SPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
|...|.|.+||++..+ .+..+.+ ...+|..++. .+.|.+++....+ +.. |+.....
T Consensus 254 Gl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f-------------~ei~~s~ 318 (463)
T KOG1645|consen 254 GLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQF-------------YEIVFSA 318 (463)
T ss_pred eccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhh-------------hhhhccc
Confidence 8899999999998643 2222221 1233443333 2234444444433 333 5443221
Q ss_pred c--CCCCC---CCCCcceeecCCCC-eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCC
Q psy467 189 P--LGTPP---PQYTSSVPFSHNTS-LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPH 262 (845)
Q Consensus 189 ~--l~~~~---~~~i~svs~spdg~-~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspd 262 (845)
. ..... +....++...+..+ .+.++...........+-+ .+. +.+ ....+...
T Consensus 319 ~~~p~vlele~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~-~~d------~~d--------------G~pVc~~r 377 (463)
T KOG1645|consen 319 ECLPCVLELEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILG-RID------FRD--------------GFPVCGKR 377 (463)
T ss_pred cCCCcccccCCCcceeeeeecCccceEEEEecCCCCCccceeeee-eec------ccc--------------Cceeeeec
Confidence 1 11011 22222333333222 2222222111100000000 000 000 00000000
Q ss_pred CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeC--CCCEEEEE
Q psy467 263 RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE--GGECLLGG 340 (845)
Q Consensus 263 g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp--dG~~Lasg 340 (845)
.. ..+........-..+.-.++.+. ++.+|...+.+.+||..+++.++++.- ..+|.+++... .+.+|++-
T Consensus 378 ~~--~~Gs~~~kl~t~~ai~~~~~nn~----iv~~gd~tn~lil~D~~s~evvQ~l~~-~epv~Dicp~~~n~~syLa~L 450 (463)
T KOG1645|consen 378 RT--YFGSKQTKLSTTQAIRAVEDNNY----IVVVGDSTNELILQDPHSFEVVQTLAL-SEPVLDICPNDTNGSSYLALL 450 (463)
T ss_pred cc--ccCCcccccccccceeccccccE----EEEecCCcceeEEeccchhheeeeccc-CcceeecceeecCCcchhhhe
Confidence 00 00000000011112222344441 566777778999999999999999885 47888888765 36688888
Q ss_pred eCCCEEEEEecC
Q psy467 341 DTEGLKVYGWEP 352 (845)
Q Consensus 341 s~DGI~IWDl~t 352 (845)
++|.++||.++.
T Consensus 451 Td~~v~Iyk~es 462 (463)
T KOG1645|consen 451 TDDRVHIYKNES 462 (463)
T ss_pred ecceEEEEecCC
Confidence 888888887653
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.30 E-value=6.4e-06 Score=89.81 Aligned_cols=158 Identities=15% Similarity=0.222 Sum_probs=112.6
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe----eEEEecCCCCCeEEEEEcCCCCEEEEEE---CCCcEEEEECCC
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSN----CIMSLSGHSTPVESVQFGNGEETLSAGC---QSGSIKIWNLAV 89 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~----~i~~l~~h~~~V~sLafSpdg~~LaSgs---~DGtV~VWDl~t 89 (845)
.+..+..++ ++++||++..+....+++..... .+.... -...-+++.|..+...+..+. +...+.+|....
T Consensus 64 a~~~~~~s~-~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~ 141 (390)
T KOG3914|consen 64 APALVLTSD-SGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS 141 (390)
T ss_pred cccccccCC-CceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccc
Confidence 344555666 89999999888887777764332 222222 223334455555445444443 445566666665
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE-cCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+.+. .+-+|-.-++.++|+||+++++++..|..|++-....-..+..+ -+|..-|..++.-+ +..|++++.|+++++
T Consensus 142 ~~~~-~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-~~~LlS~sGD~tlr~ 219 (390)
T KOG3914|consen 142 GRCE-PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-NYLLLSGSGDKTLRL 219 (390)
T ss_pred cCcc-hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeecc-CceeeecCCCCcEEE
Confidence 4443 34469999999999999999999999999999887655555554 46999999999986 456899999999999
Q ss_pred eeeeccCCceeEEEECCCCccCC
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLG 191 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~ 191 (845)
||+.+|+.+.
T Consensus 220 -------------Wd~~sgk~L~ 229 (390)
T KOG3914|consen 220 -------------WDITSGKLLD 229 (390)
T ss_pred -------------EecccCCccc
Confidence 9999999943
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.00053 Score=72.53 Aligned_cols=239 Identities=14% Similarity=0.178 Sum_probs=138.0
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCC--eeEEEe---cCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE
Q psy467 20 CLALGKKSGQVLATGGDDKKVNLWALGKS--NCIMSL---SGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~i~~l---~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~ 94 (845)
.++.+. +|++||+-- |..|.|=...+. ..+... +.....=+-++||||+..||.+...|+|+++|+.. ..+.
T Consensus 2 ~~~~~~-~Gk~lAi~q-d~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf 78 (282)
T PF15492_consen 2 HLALSS-DGKLLAILQ-DQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELF 78 (282)
T ss_pred ceeecC-CCcEEEEEe-ccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeE
Confidence 356666 899888775 456666654321 222222 22233457899999999999999999999999974 4444
Q ss_pred EEcC-------CCCCeEEEEEccCC------CEEEEEECCCeEEEEECCC-----CceEEEEc--C-CCCCeEEEEEecC
Q psy467 95 TLNG-------HKSSITSVDFHPYG------DYLCSGSLDSFIKLWDLRR-----KGCIYTYR--G-HSKSINSIRFSPD 153 (845)
Q Consensus 95 ~l~~-------h~~~V~~lafspdg------~~Lasgs~DG~I~IWDl~t-----~~~l~~~~--~-h~~~V~sLafSPd 153 (845)
.+.. ....|..+.|.+.. ..|++-..+|.++-|-+.. .+..+++. . +...|.++.++|.
T Consensus 79 ~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~ 158 (282)
T PF15492_consen 79 VIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPK 158 (282)
T ss_pred EcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCC
Confidence 4432 12456677776532 2566777888888776532 22333332 2 4668999999999
Q ss_pred CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCC-C-ccceeeEeeec
Q psy467 154 GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPG-G-TKAKIDVTRIE 231 (845)
Q Consensus 154 g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~-~-~~~~i~V~~i~ 231 (845)
.++|++||....=.- ........+..|.+-++.+- ...+...... . ...+...+.+
T Consensus 159 h~LLlVgG~~~~~~~--~s~a~~~GLtaWRiL~~~Py-------------------yk~v~~~~~~~~~~~~~~~~~~~- 216 (282)
T PF15492_consen 159 HRLLLVGGCEQNQDG--MSKASSCGLTAWRILSDSPY-------------------YKQVTSSEDDITASSKRRGLLRI- 216 (282)
T ss_pred CCEEEEeccCCCCCc--cccccccCceEEEEcCCCCc-------------------EEEccccCccccccccccceeec-
Confidence 898887764321100 01112334445666555441 1111110000 0 0000000000
Q ss_pred ccccccccccchhhhhhccCCCceeE-EEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSA-IFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l-~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
..+ .|+-.+ .....|..+..||||. +||+...+|.|.+|++.
T Consensus 217 -----------------------~~~~~fs~~~---------~~~d~i~kmSlSPdg~-----~La~ih~sG~lsLW~iP 259 (282)
T PF15492_consen 217 -----------------------PSFKFFSRQG---------QEQDGIFKMSLSPDGS-----LLACIHFSGSLSLWEIP 259 (282)
T ss_pred -----------------------cceeeeeccc---------cCCCceEEEEECCCCC-----EEEEEEcCCeEEEEecC
Confidence 011 111111 1235678888899998 99999999999999999
Q ss_pred CCeEEEEecC
Q psy467 311 KFSLVSTTEK 320 (845)
Q Consensus 311 s~~~l~tl~g 320 (845)
+-.+...+..
T Consensus 260 sL~~~~~W~~ 269 (282)
T PF15492_consen 260 SLRLQRSWKQ 269 (282)
T ss_pred cchhhcccch
Confidence 8777666553
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.3e-05 Score=94.50 Aligned_cols=190 Identities=22% Similarity=0.249 Sum_probs=134.1
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sL 148 (845)
++..++.|+....+..+|+.+.+..+......+.|+-++. +++++++|...|+|.+-|.++.+.++++.+|.+.|.++
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf 223 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF 223 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeee
Confidence 3556777878888999999988777766545545666654 57899999999999999999999999999999999876
Q ss_pred EEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEe
Q psy467 149 RFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVT 228 (845)
Q Consensus 149 afSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~ 228 (845)
... |+.|+++|..+.... -..+.=+.|||++..+.+.. +.-+.++
T Consensus 224 Dv~--GNlLitCG~S~R~~~----l~~D~FvkVYDLRmmral~P--------------------I~~~~~P--------- 268 (1118)
T KOG1275|consen 224 DVQ--GNLLITCGYSMRRYN----LAMDPFVKVYDLRMMRALSP--------------------IQFPYGP--------- 268 (1118)
T ss_pred ecc--CCeEEEeeccccccc----ccccchhhhhhhhhhhccCC--------------------cccccCc---------
Confidence 665 999999986543311 01122345599987766221 1111111
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEE
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWD 308 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWD 308 (845)
.-+.|.|.-. ..+++++..|...+-|
T Consensus 269 --------------------------~flrf~Psl~----------------------------t~~~V~S~sGq~q~vd 294 (1118)
T KOG1275|consen 269 --------------------------QFLRFHPSLT----------------------------TRLAVTSQSGQFQFVD 294 (1118)
T ss_pred --------------------------hhhhhccccc----------------------------ceEEEEecccceeecc
Confidence 2344555433 1677888889999998
Q ss_pred CCCC----eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 309 LEKF----SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 309 l~s~----~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
..+. .-+..+......+..+++|++|+.||.|..+| |.+|.
T Consensus 295 ~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 295 TATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred ccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 4332 11223333345599999999999999999999 99997
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.8e-05 Score=93.52 Aligned_cols=137 Identities=20% Similarity=0.303 Sum_probs=107.3
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV 106 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~l 106 (845)
++..++.|+-...+..+|+.+.+..+...-....|.-|+. +++++.+|...|+|.+-|..+.+.++++..|.+.|.++
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf 223 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF 223 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeee
Confidence 4456777777778889999888887777655556766665 57899999999999999999999999999999999876
Q ss_pred EEccCCCEEEEEEC---------CCeEEEEECCCCceEEEEcCCCCCeEEEEEecC-CCEEEEEeCCCcEEE
Q psy467 107 DFHPYGDYLCSGSL---------DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD-GQWIASGGEDGVVRI 168 (845)
Q Consensus 107 afspdg~~Lasgs~---------DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd-g~~Lasgs~DG~I~I 168 (845)
..+ |+.|++++. |..|+|||++..+.+.-+.-+.+ ..-+.|+|. ...+++++..|...+
T Consensus 224 Dv~--GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~-P~flrf~Psl~t~~~V~S~sGq~q~ 292 (1118)
T KOG1275|consen 224 DVQ--GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYG-PQFLRFHPSLTTRLAVTSQSGQFQF 292 (1118)
T ss_pred ecc--CCeEEEeecccccccccccchhhhhhhhhhhccCCcccccC-chhhhhcccccceEEEEecccceee
Confidence 664 889998875 45689999998776655543333 255778884 456888888888888
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.22 E-value=0.002 Score=79.14 Aligned_cols=236 Identities=14% Similarity=0.167 Sum_probs=145.7
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC----C--
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR----R-- 131 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~----t-- 131 (845)
...|.++.|..+++.++.+..+|.|.+-|.++.... ....-...|.+++|+||+..++..+..+++.+.+-. .
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~ 146 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEK 146 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhcc
Confidence 468999999999999999999999999998876432 223345679999999999999998888887665431 0
Q ss_pred -----------------CceEEEEcCC---------------------CCCeEEEEEecCCCEEEEEeC----C-CcEEE
Q psy467 132 -----------------KGCIYTYRGH---------------------SKSINSIRFSPDGQWIASGGE----D-GVVRI 168 (845)
Q Consensus 132 -----------------~~~l~~~~~h---------------------~~~V~sLafSPdg~~Lasgs~----D-G~I~I 168 (845)
|+.-..|++. ...=..+.|.-||.++|+... + ..|++
T Consensus 147 ~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV 226 (1265)
T KOG1920|consen 147 PLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRV 226 (1265)
T ss_pred ccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEE
Confidence 1111122211 111234889999999988431 2 45666
Q ss_pred eeeeccCCceeEEEECCCCccCC--CCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLG--TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~--~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
||.. |.... ......-.+++|.|.|..++++......+
T Consensus 227 -------------~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~-------------------------- 266 (1265)
T KOG1920|consen 227 -------------YDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDS-------------------------- 266 (1265)
T ss_pred -------------eccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCC--------------------------
Confidence 9987 44321 12245567899999999998876554431
Q ss_pred hhccCCCceeEEEcCCCCcCCCCccc--cc-ccCceeEEEcCCCCcccceEEEE---EeCCCeEEEEECCCCe--EEEEe
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCV--PV-SVSRTSLSILPQSPMLCFILTTS---SSADRTVNFWDLEKFS--LVSTT 318 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~--~~-~~~I~slafSPdg~~~~~~lLat---gs~DG~I~IWDl~s~~--~l~tl 318 (845)
..+-|-++|- .+..-.+ +. ...+..++|+.++. +|++ ......|++|-+.+.. +.+.+
T Consensus 267 --------~IvffErNGL-~hg~f~l~~p~de~~ve~L~Wns~sd-----iLAv~~~~~e~~~v~lwt~~NyhWYLKq~l 332 (1265)
T KOG1920|consen 267 --------DIVFFERNGL-RHGEFVLPFPLDEKEVEELAWNSNSD-----ILAVVTSNLENSLVQLWTTGNYHWYLKQEL 332 (1265)
T ss_pred --------cEEEEecCCc-cccccccCCcccccchheeeecCCCC-----ceeeeecccccceEEEEEecCeEEEEEEEE
Confidence 1233444443 1111111 11 22388999999998 6665 4445569999987743 33333
Q ss_pred cCCCCCEEEEEEeCC-CCEEEEEeCCC-EEEEEe
Q psy467 319 EKNSSTIRRLTFSEG-GECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 319 ~gh~~~VtslafSpd-G~~Lasgs~DG-I~IWDl 350 (845)
.-..... +.|+|. ...|.+-..+| ..++++
T Consensus 333 ~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v~~~ 364 (1265)
T KOG1920|consen 333 QFSQKAL--LMWDPVTEKTLHVLRESGQRLVRDF 364 (1265)
T ss_pred ecccccc--ccccCCCceeEEEEecCCcEEEEEE
Confidence 3222222 788884 22343333555 444443
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.22 E-value=8e-07 Score=103.65 Aligned_cols=124 Identities=25% Similarity=0.399 Sum_probs=99.5
Q ss_pred eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC--eEEEE
Q psy467 50 CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS--FIKLW 127 (845)
Q Consensus 50 ~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG--~I~IW 127 (845)
..+++..|+..-+|++|+-+.+.|+.|+..|.|+++++.+|.......+|...|+.+.-+.||..+++.+.-. -..+|
T Consensus 1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHh
Confidence 4556677889999999999999999999999999999999999999999999999999999998877765433 46799
Q ss_pred ECCC-CceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 128 DLRR-KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 128 Dl~t-~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
++.+ +...++|. .-.++.|+.....-+.|+......+ ||+.++..+
T Consensus 1173 ~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~-------------YDvqT~~~l 1219 (1516)
T KOG1832|consen 1173 DASSTGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALL-------------YDVQTCSPL 1219 (1516)
T ss_pred ccccccCcccccc----ccceeehhhhHHHHHhcccccceEE-------------EecccCcHH
Confidence 9853 45555554 3457888876555555665566777 999998873
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00049 Score=78.47 Aligned_cols=146 Identities=12% Similarity=0.003 Sum_probs=94.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCC-CeE------EEEEcC--CCCEEEEEECCCcEEEEECCCCcEEEEEcC
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHST-PVE------SVQFGN--GEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~-~V~------sLafSp--dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~ 98 (845)
+..+++++.+|.+.-+|..+|+.+........ ... .+.-.| ++..++.++.+|.+..+|.++|+.+.+...
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~ 148 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKV 148 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccccC
Confidence 45777888889999999999998877643220 000 000011 356677788899999999999998887764
Q ss_pred CCCCeEE-EEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEE-EEEec--CCCEEEEEeCCCcEEEeeeecc
Q psy467 99 HKSSITS-VDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS-IRFSP--DGQWIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 99 h~~~V~~-lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~s-LafSP--dg~~Lasgs~DG~I~I~~~~~~ 174 (845)
.. .+.+ ... .+..+++++.+|.|..+|..+|+.+..+......+.. ..-+| .+..++.++.+|.+..
T Consensus 149 ~~-~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a------ 219 (394)
T PRK11138 149 AG-EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSA------ 219 (394)
T ss_pred CC-ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEE------
Confidence 32 2221 112 2456777888999999999999999887643111100 00111 1335666777788877
Q ss_pred CCceeEEEECCCCcc
Q psy467 175 TNTSIHVVDLSLVHP 189 (845)
Q Consensus 175 ~~~~I~vWDl~tg~~ 189 (845)
+|..+|+.
T Consensus 220 -------~d~~~G~~ 227 (394)
T PRK11138 220 -------VLMEQGQL 227 (394)
T ss_pred -------EEccCChh
Confidence 88888776
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.1e-05 Score=92.08 Aligned_cols=170 Identities=21% Similarity=0.289 Sum_probs=127.5
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~ 94 (845)
...++|++++ +..|+.|+.+|.|++++... .. .+...|... .-+|.++++|+.||+|.|-.+.+.+...
T Consensus 39 ~D~is~~av~---~~~~~~GtH~g~v~~~~~~~-~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~ 107 (846)
T KOG2066|consen 39 NDAISCCAVH---DKFFALGTHRGAVYLTTCQG-NP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEIT 107 (846)
T ss_pred hhHHHHHHhh---cceeeeccccceEEEEecCC-cc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccce
Confidence 3568888885 48999999999999999753 33 434445444 6689999999999999999999988777
Q ss_pred EEcCCCCCeEEEEEccC-----CCEEEEEECCCeEEEEECCC--CceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 95 TLNGHKSSITSVDFHPY-----GDYLCSGSLDSFIKLWDLRR--KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 95 ~l~~h~~~V~~lafspd-----g~~Lasgs~DG~I~IWDl~t--~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
++. ...++.+++++|+ .+.+++|+..| +.++.-+- .+.-..+....++|.++.|. |+++|-++.+| |+
T Consensus 108 ~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~ 182 (846)
T KOG2066|consen 108 QYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG-VK 182 (846)
T ss_pred eEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-cE
Confidence 776 5568999999998 46899999988 77775421 11112355577899999998 88999888776 78
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCC--------CCCcceeecCCCCeEEEE
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPP--------QYTSSVPFSHNTSLRKSF 213 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~--------~~i~svs~spdg~~l~~~ 213 (845)
+ ||+.+++.+...++ .....+.|.++.+++.-+
T Consensus 183 v-------------yd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW 223 (846)
T KOG2066|consen 183 V-------------YDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGW 223 (846)
T ss_pred E-------------EeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEec
Confidence 8 99999887766542 223466777777665543
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.3e-05 Score=88.02 Aligned_cols=114 Identities=15% Similarity=0.205 Sum_probs=91.2
Q ss_pred CCCcEEEEEEecCCCCEEEEEe----CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy467 14 HGASVNCLALGKKSGQVLATGG----DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs----~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t 89 (845)
..+.-+-..|+| ...++|+++ ..|.|.||- ++|++.+... ..-.+++++|+|..-.|+.|-.-|.+.+|...+
T Consensus 14 sdavsti~SWHP-sePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~ 90 (1416)
T KOG3617|consen 14 SDAVSTISSWHP-SEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNT 90 (1416)
T ss_pred ccccccccccCC-CCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCC
Confidence 334444567999 888999886 457888885 4566544332 223466799999988899998899999999988
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~ 130 (845)
.+.-.....|..+|..+.||++|..++++..-|.|.+|...
T Consensus 91 ~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 91 TETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 77666667899999999999999999999999999999875
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.1e-05 Score=59.99 Aligned_cols=39 Identities=26% Similarity=0.788 Sum_probs=36.9
Q ss_pred CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 48 SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 48 ~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
++++.++.+|...|++|+|+|++.+|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 367889999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00022 Score=84.29 Aligned_cols=206 Identities=17% Similarity=0.211 Sum_probs=135.9
Q ss_pred EEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC-eEEEEEccCCCEEEEEECCC-----eEEEEECCC------C
Q psy467 65 QFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS-ITSVDFHPYGDYLCSGSLDS-----FIKLWDLRR------K 132 (845)
Q Consensus 65 afSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~-V~~lafspdg~~Lasgs~DG-----~I~IWDl~t------~ 132 (845)
+|++.+..+|.|+.+|.|.+.+-. .+.+..++.+... |+.+....+..+|++.+.|+ .|++||++. .
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP 108 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP 108 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence 467888999999999999887753 3445777777766 55544444446888877665 489999853 2
Q ss_pred ceEE--EEcC-----CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecC
Q psy467 133 GCIY--TYRG-----HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSH 205 (845)
Q Consensus 133 ~~l~--~~~~-----h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~sp 205 (845)
.++. .+.. ...++.+++.+.+-+.+|+|-.+|.|.. +. |..
T Consensus 109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~-------------~~---GDi---------------- 156 (933)
T KOG2114|consen 109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVIC-------------YK---GDI---------------- 156 (933)
T ss_pred ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEE-------------Ec---Ccc----------------
Confidence 3441 1211 2457889999999899999999999888 32 221
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
+. ..+ ....++..+. .+|+.+++..
T Consensus 157 ----~R-----Drg-----------------------------------sr~~~~~~~~-----------~pITgL~~~~ 181 (933)
T KOG2114|consen 157 ----LR-----DRG-----------------------------------SRQDYSHRGK-----------EPITGLALRS 181 (933)
T ss_pred ----hh-----ccc-----------------------------------cceeeeccCC-----------CCceeeEEec
Confidence 00 000 1222333333 5777888877
Q ss_pred CCCcccceEEEEEeCCCeEEEEECCCCeE-EEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEec-CCC
Q psy467 286 QSPMLCFILTTSSSADRTVNFWDLEKFSL-VSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQP-MGW 363 (845)
Q Consensus 286 dg~~~~~~lLatgs~DG~I~IWDl~s~~~-l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~-~h~ 363 (845)
+++. .+.++ .-..|.+|.+....+ ...+..|+..++|..|++....+++++...+.+|+.+..+.-.++. +|.
T Consensus 182 d~~s----~lFv~-Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY~sd~~~~cfaf~~g~k 256 (933)
T KOG2114|consen 182 DGKS----VLFVA-TTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFYDSDGRGPCFAFEVGEK 256 (933)
T ss_pred CCce----eEEEE-ecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCceEEEEcCCCcceeeeecCCCe
Confidence 7773 22222 245799999985543 5557788889999999986665777777779999987655444554 443
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.4e-05 Score=59.37 Aligned_cols=37 Identities=30% Similarity=0.637 Sum_probs=35.1
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEE
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWA 44 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWd 44 (845)
.+++|.+|.+.|++|+|+| ++.+|++++.|+.|++||
T Consensus 3 ~~~~~~~h~~~i~~i~~~~-~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSSSINSIAWSP-DGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSSSEEEEEEET-TSSEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCcEEEEEEec-ccccceeeCCCCEEEEEC
Confidence 4688999999999999999 899999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.6e-05 Score=85.24 Aligned_cols=163 Identities=14% Similarity=0.209 Sum_probs=111.2
Q ss_pred EEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCC
Q psy467 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP 195 (845)
Q Consensus 116 asgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~ 195 (845)
++.+.+..|-+-|++++.. +.|. ..+.|.++.|...++++..|+.+|.|.. +|++.+..
T Consensus 228 fs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~-------------iDLR~rnq------ 286 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFV-------------IDLRCRNQ------ 286 (425)
T ss_pred ecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecccCCcEEE-------------EEeeeccc------
Confidence 5556677788999987643 3333 5677899999988999999999999999 99987633
Q ss_pred CCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccc
Q psy467 196 QYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVS 275 (845)
Q Consensus 196 ~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~ 275 (845)
-++.....+ -|..
T Consensus 287 ---------G~~~~a~rl-yh~S--------------------------------------------------------- 299 (425)
T KOG2695|consen 287 ---------GNGWCAQRL-YHDS--------------------------------------------------------- 299 (425)
T ss_pred ---------CCCcceEEE-EcCc---------------------------------------------------------
Confidence 000001111 1111
Q ss_pred cCceeEEEcC-CCCcccceEEEEEeCCCeEEEEECCCCeE---EEEecCCCCCEE--EEEEeCCCCEEEEEeCCC-EEEE
Q psy467 276 VSRTSLSILP-QSPMLCFILTTSSSADRTVNFWDLEKFSL---VSTTEKNSSTIR--RLTFSEGGECLLGGDTEG-LKVY 348 (845)
Q Consensus 276 ~~I~slafSP-dg~~~~~~lLatgs~DG~I~IWDl~s~~~---l~tl~gh~~~Vt--slafSpdG~~Lasgs~DG-I~IW 348 (845)
.|+++..-. +++ +|++.+.+|.|.+||++--++ +.++.||...-. -+-..+....++++++|. .+||
T Consensus 300 -svtslq~Lq~s~q-----~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiW 373 (425)
T KOG2695|consen 300 -SVTSLQILQFSQQ-----KLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIW 373 (425)
T ss_pred -chhhhhhhccccc-----eEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEE
Confidence 122222211 222 788889999999999987777 888888843322 223455677888899999 9999
Q ss_pred EecCCceEEEecCCCC----CeEEEEEc
Q psy467 349 GWEPARQYDAQPMGWG----KVQDLAVT 372 (845)
Q Consensus 349 Dl~tgk~l~tl~~h~~----~VtsVafS 372 (845)
.++.|+++.+++.... .+.+++|.
T Consensus 374 sl~~ghLl~tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 374 SLDSGHLLCTIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred ecccCceeeccCCCCccccccccceehh
Confidence 9999999998875443 35556665
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.0039 Score=70.17 Aligned_cols=95 Identities=8% Similarity=0.098 Sum_probs=63.9
Q ss_pred ecCCCCEEEEEe---------CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE
Q psy467 24 GKKSGQVLATGG---------DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 24 Sp~dg~~LaTgs---------~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~ 94 (845)
|| |+++++... ..+.+.|||+.+++...... ....+....|||+|+.+|... ++.|.+++..++...+
T Consensus 1 S~-d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~-~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~ 77 (353)
T PF00930_consen 1 SP-DGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTP-PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQ 77 (353)
T ss_dssp -T-TSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS--EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEE
T ss_pred CC-CCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcC-CccccccceeecCCCeeEEEe-cCceEEEECCCCCeEE
Confidence 46 777777642 34678999999876554333 367889999999999999884 7899999998774443
Q ss_pred EEcCC-----------------CCCeEEEEEccCCCEEEEEECC
Q psy467 95 TLNGH-----------------KSSITSVDFHPYGDYLCSGSLD 121 (845)
Q Consensus 95 ~l~~h-----------------~~~V~~lafspdg~~Lasgs~D 121 (845)
.-... -+.-..+.||||+++|+....|
T Consensus 78 lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d 121 (353)
T PF00930_consen 78 LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFD 121 (353)
T ss_dssp SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE
T ss_pred eccccceeEEcCccceeccccccccccceEECCCCCEEEEEEEC
Confidence 22111 1123568899999999876543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.02 E-value=6.6e-05 Score=77.93 Aligned_cols=163 Identities=17% Similarity=0.230 Sum_probs=92.5
Q ss_pred ccCCC-cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE------------EEecCCCCCeEEEEEcCCCCEEEEEEC
Q psy467 12 MAHGA-SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI------------MSLSGHSTPVESVQFGNGEETLSAGCQ 78 (845)
Q Consensus 12 ~gH~~-~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i------------~~l~~h~~~V~sLafSpdg~~LaSgs~ 78 (845)
.+|.+ .|+.+.++. ...|+++..++.+.......+.+. +.+..|..+-.+-+.+-.++.++++..
T Consensus 32 ~~~~d~~~~~~~~v~--~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~ 109 (319)
T KOG4714|consen 32 MQHADVKLSKVSLSA--EYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYA 109 (319)
T ss_pred ccccceEEEEeechh--hheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCC
Confidence 34443 366777763 567888888877776665444333 233333333333333445677999999
Q ss_pred CCcEEEEECCCCcEE-EEEcCCCCCeEEEEEccCCCEEEEEE-----CCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 79 SGSIKIWNLAVPTVQ-RTLNGHKSSITSVDFHPYGDYLCSGS-----LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 79 DGtV~VWDl~tg~~v-~~l~~h~~~V~~lafspdg~~Lasgs-----~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
||.+.+.+.+.-..+ ..+......-.+.+....++.+.++. .-+..+.|+++..+.+..-+.....|.+++-+|
T Consensus 110 dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp 189 (319)
T KOG4714|consen 110 DGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHP 189 (319)
T ss_pred CceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccccccchhhhCCc
Confidence 999999998752111 11111111112223333444444433 223466777654433322222233489999999
Q ss_pred C-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 153 D-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 153 d-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
. .+.+++|+.||.+.+ ||.++...
T Consensus 190 ~qq~~v~cgt~dg~~~l-------------~d~rn~~~ 214 (319)
T KOG4714|consen 190 AQQHLVCCGTDDGIVGL-------------WDARNVAM 214 (319)
T ss_pred ccccEEEEecCCCeEEE-------------EEcccccc
Confidence 5 456778889999999 99987643
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.001 Score=77.57 Aligned_cols=135 Identities=18% Similarity=0.205 Sum_probs=96.4
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE--
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV-- 92 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~-- 92 (845)
..|.=-+++. ++++++.|+.-|.+++|+-..+.....-. +....+..+..|++..++|+|+..|.|.++.+.....
T Consensus 34 ~~v~lTc~ds-t~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~ 112 (726)
T KOG3621|consen 34 ARVKLTCVDA-TEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRD 112 (726)
T ss_pred ceEEEEEeec-CCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCc
Confidence 3344344444 88999999999999999976655433222 3445566677888888999999999999998876421
Q ss_pred ---EEEE-cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc----eEEEEcCCCCCeEEEEEe
Q psy467 93 ---QRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG----CIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 93 ---v~~l-~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~----~l~~~~~h~~~V~sLafS 151 (845)
+... +.|...|++++|++++..+++|...|.|.+-.+.+.. ..+.+....+.|..+...
T Consensus 113 ~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~ 179 (726)
T KOG3621|consen 113 LDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL 179 (726)
T ss_pred ceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc
Confidence 1111 2367889999999999999999999999988887621 122233345667777666
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.0014 Score=77.18 Aligned_cols=266 Identities=14% Similarity=0.132 Sum_probs=143.5
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCC-------------CCCeE-------EEEE--------c-----CCCCEEEEE
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGH-------------STPVE-------SVQF--------G-----NGEETLSAG 76 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h-------------~~~V~-------sLaf--------S-----pdg~~LaSg 76 (845)
.+.+|+..|.++|+-+.+++.++.+.-. +..|. .+.| | .||+||+.-
T Consensus 68 ~f~SgG~sG~~~v~G~PSmr~l~~ipvf~~~~~~G~G~~~esk~~l~~~~~~~~~~~gD~HHp~~s~t~g~ydGr~~fin 147 (635)
T PRK02888 68 GFWSGGHSGEVRILGLPSMRELMRIPVFNRDSATGWGITNESKKVLGEGARGGKYLNGDTHHPHMSFTDGTYDGRYLFIN 147 (635)
T ss_pred EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHhhccccCCcccCCCcCCCcccccCCccceeEEEEe
Confidence 4667889999999999998887765310 00111 0111 1 267777776
Q ss_pred EC-CCcEEEEECCCCcEEEEEcC-CCCCeEEEE-------------------EccCCCEEEE-EECCCeEEEEECCCCce
Q psy467 77 CQ-SGSIKIWNLAVPTVQRTLNG-HKSSITSVD-------------------FHPYGDYLCS-GSLDSFIKLWDLRRKGC 134 (845)
Q Consensus 77 s~-DGtV~VWDl~tg~~v~~l~~-h~~~V~~la-------------------fspdg~~Las-gs~DG~I~IWDl~t~~~ 134 (845)
.. ...|...+++..++-+.+.- ....+..++ +.|||+.+.. .-..+.+.+.|..+.+.
T Consensus 148 dk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvID~etmeV 227 (635)
T PRK02888 148 DKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAVDAETMEV 227 (635)
T ss_pred cCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEEECccceE
Confidence 54 45677777766554333321 112222223 3445544422 22345677888888777
Q ss_pred EEEEcCCCCCeEEEEEecCCCEEEEEeC---CCc-EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeE
Q psy467 135 IYTYRGHSKSINSIRFSPDGQWIASGGE---DGV-VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR 210 (845)
Q Consensus 135 l~~~~~h~~~V~sLafSPdg~~Lasgs~---DG~-I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l 210 (845)
..++.- .+....++++++|+++++.+. .|. +.. .-......+.+++..... .+.++|+..
T Consensus 228 ~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~e--m~a~e~d~~vvfni~~ie-------------a~vkdGK~~ 291 (635)
T PRK02888 228 AWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAE--MMAAERDWVVVFNIARIE-------------EAVKAGKFK 291 (635)
T ss_pred EEEEEe-CCCcccceECCCCCEEEEeccCcccCcceee--eccccCceEEEEchHHHH-------------HhhhCCCEE
Confidence 777653 335567899999999888763 222 222 000011112222222111 223344422
Q ss_pred EEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcc
Q psy467 211 KSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPML 290 (845)
Q Consensus 211 ~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~ 290 (845)
.. .+ . .+.+.+..... +.....+ ..+++......++++|||+.
T Consensus 292 ~V-~g--n-----~V~VID~~t~~----------------~~~~~v~------------~yIPVGKsPHGV~vSPDGky- 334 (635)
T PRK02888 292 TI-GG--S-----KVPVVDGRKAA----------------NAGSALT------------RYVPVPKNPHGVNTSPDGKY- 334 (635)
T ss_pred EE-CC--C-----EEEEEECCccc----------------cCCcceE------------EEEECCCCccceEECCCCCE-
Confidence 21 10 0 01110000000 0000111 12233446678899999984
Q ss_pred cceEEEEEeCCCeEEEEECCCCeE------------EEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 291 CFILTTSSSADRTVNFWDLEKFSL------------VSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 291 ~~~lLatgs~DG~I~IWDl~s~~~------------l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
+++++..+++|.|+|+.+.+. +.+..- ...-...+|+++|....+-..|. |..|+++.
T Consensus 335 ---lyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 335 ---FIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred ---EEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 566666799999999987542 333332 23346788999998888888888 99999986
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0026 Score=69.87 Aligned_cols=253 Identities=15% Similarity=0.110 Sum_probs=143.7
Q ss_pred EEEEecCCCCEEEEEe----------CCCeEEEEECCCCeeEEEecCC---C----CCeEEEEEcCCCCEEEEEEC--CC
Q psy467 20 CLALGKKSGQVLATGG----------DDKKVNLWALGKSNCIMSLSGH---S----TPVESVQFGNGEETLSAGCQ--SG 80 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs----------~DG~I~IWdl~t~~~i~~l~~h---~----~~V~sLafSpdg~~LaSgs~--DG 80 (845)
.+..+| +++.+++++ ..-.|.+||..+......+.-. . .....++++.|+++++...- ..
T Consensus 40 ~~~~sp-dgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~ 118 (342)
T PF06433_consen 40 NVALSP-DGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPAT 118 (342)
T ss_dssp EEEE-T-TSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSE
T ss_pred ceeECC-CCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCC
Confidence 356788 888888764 2336999999998776644211 1 22345678899998887543 56
Q ss_pred cEEEEECCCCcEEEEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECC-CCceEEEEc----CCCCC-eEEEEEecC
Q psy467 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLR-RKGCIYTYR----GHSKS-INSIRFSPD 153 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~-t~~~l~~~~----~h~~~-V~sLafSPd 153 (845)
.|.|.|+..++.+..+.. .+ +..+ -|. ++-|.+-|.||.+.-..+. .|+...+.. ....+ +..-++...
T Consensus 119 SVtVVDl~~~kvv~ei~~-PG-C~~i--yP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~ 194 (342)
T PF06433_consen 119 SVTVVDLAAKKVVGEIDT-PG-CWLI--YPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRD 194 (342)
T ss_dssp EEEEEETTTTEEEEEEEG-TS-EEEE--EEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETT
T ss_pred eEEEEECCCCceeeeecC-CC-EEEE--EecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECC
Confidence 799999999999888862 22 2222 232 2468888999999999887 455543221 11122 223344545
Q ss_pred CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccc
Q psy467 154 GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEEN 233 (845)
Q Consensus 154 g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~ 233 (845)
+..++-.+.+|.|+- -|+..... +.... |++...
T Consensus 195 ~~~~~F~Sy~G~v~~-------------~dlsg~~~------------------~~~~~---------------~~~~t~ 228 (342)
T PF06433_consen 195 GGRLYFVSYEGNVYS-------------ADLSGDSA------------------KFGKP---------------WSLLTD 228 (342)
T ss_dssp TTEEEEEBTTSEEEE-------------EEETTSSE------------------EEEEE---------------EESS-H
T ss_pred CCeEEEEecCCEEEE-------------EeccCCcc------------------cccCc---------------ccccCc
Confidence 555555667777776 66554332 00111 111000
Q ss_pred ccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE--eCCC-------eE
Q psy467 234 AESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS--SADR-------TV 304 (845)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg--s~DG-------~I 304 (845)
.+ ..-.|-|.|. .-+++++..+. +++.. +.++ .|
T Consensus 229 ~e-------------------~~~~WrPGG~--------------Q~~A~~~~~~r----lyvLMh~g~~gsHKdpgteV 271 (342)
T PF06433_consen 229 AE-------------------KADGWRPGGW--------------QLIAYHAASGR----LYVLMHQGGEGSHKDPGTEV 271 (342)
T ss_dssp HH-------------------HHTTEEE-SS--------------S-EEEETTTTE----EEEEEEE--TT-TTS-EEEE
T ss_pred cc-------------------cccCcCCcce--------------eeeeeccccCe----EEEEecCCCCCCccCCceEE
Confidence 00 0001333332 23344433321 11111 1122 58
Q ss_pred EEEECCCCeEEEEecCCCCCEEEEEEeCCCC-EEEEEe-CCC-EEEEEecCCceEEEecC
Q psy467 305 NFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE-CLLGGD-TEG-LKVYGWEPARQYDAQPM 361 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh~~~VtslafSpdG~-~Lasgs-~DG-I~IWDl~tgk~l~tl~~ 361 (845)
.+||+.+++.+.++.. ..++.+|..+.+.+ .|++.+ .++ +.+||..+|+.+.++..
T Consensus 272 Wv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 272 WVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 8999999999999884 24688999999876 555544 467 99999999999988864
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=97.99 E-value=6.3e-05 Score=83.06 Aligned_cols=169 Identities=19% Similarity=0.227 Sum_probs=120.7
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeC-CCeEEEEECCCCeeEEEec--CCCCCeEEEEEcCC-C-CEEEEE-ECCCc
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGD-DKKVNLWALGKSNCIMSLS--GHSTPVESVQFGNG-E-ETLSAG-CQSGS 81 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~--~h~~~V~sLafSpd-g-~~LaSg-s~DGt 81 (845)
++.+..|-+.|.+++.+- +|.++.|.+. |..++++|+++-..+.-++ .-.+.+.++ .++. . ..|+++ ..+|.
T Consensus 46 VKhFraHL~~I~sl~~S~-dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~ 123 (558)
T KOG0882|consen 46 VKHFRAHLGVILSLAVSY-DGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGK 123 (558)
T ss_pred hhhhHHHHHHHHhhhccc-cceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEe-cCCCCeeeeEEeecccCCC
Confidence 345778888999999988 9999999777 9999999997755442222 122222221 1221 1 133333 34789
Q ss_pred EEEEECCCCc--EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC------CceEEEEc---------CCCCC
Q psy467 82 IKIWNLAVPT--VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR------KGCIYTYR---------GHSKS 144 (845)
Q Consensus 82 V~VWDl~tg~--~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t------~~~l~~~~---------~h~~~ 144 (845)
+.++|-.... ....-.-|..+|.++.+++.+..+++....|.|.-|.... .+....++ .....
T Consensus 124 i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~ 203 (558)
T KOG0882|consen 124 IFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTE 203 (558)
T ss_pred cEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccC
Confidence 9999976543 2233345899999999999999999999999999998862 11222222 23456
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCC
Q psy467 145 INSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG 191 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~ 191 (845)
..++.|+|+|..+.+-+.|..|++ ++..+++..+
T Consensus 204 pts~Efsp~g~qistl~~DrkVR~-------------F~~KtGklvq 237 (558)
T KOG0882|consen 204 PTSFEFSPDGAQISTLNPDRKVRG-------------FVFKTGKLVQ 237 (558)
T ss_pred ccceEEccccCcccccCcccEEEE-------------EEeccchhhh
Confidence 789999999999999999999999 9999988743
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0047 Score=72.61 Aligned_cols=148 Identities=10% Similarity=0.146 Sum_probs=94.6
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCCCC--eEEEEEcC--CCCEEEEEE---------CCCcEEEEECCCCcEEEE
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTP--VESVQFGN--GEETLSAGC---------QSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~--V~sLafSp--dg~~LaSgs---------~DGtV~VWDl~tg~~v~~ 95 (845)
..++.++.+|.|.-+|..+|+.+.+....... -..+.-+| .+..++.++ .+|.|..+|..+|+.+..
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~ 190 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR 190 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence 67788888999999999999998877643221 01111112 124455554 367899999999998887
Q ss_pred EcCCCCC--------------------e-EEEEEccCCCEEEEEECCC------------------eEEEEECCCCceEE
Q psy467 96 LNGHKSS--------------------I-TSVDFHPYGDYLCSGSLDS------------------FIKLWDLRRKGCIY 136 (845)
Q Consensus 96 l~~h~~~--------------------V-~~lafspdg~~Lasgs~DG------------------~I~IWDl~t~~~l~ 136 (845)
+...... + ...++.+.+..++.++.++ .|.-+|..+++.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W 270 (488)
T cd00216 191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKW 270 (488)
T ss_pred eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEE
Confidence 7532110 1 1234444566777777665 79999999999998
Q ss_pred EEcCCCCCeEE------EEEe----cCCC---EEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 137 TYRGHSKSINS------IRFS----PDGQ---WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 137 ~~~~h~~~V~s------LafS----Pdg~---~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.+......... ..+. -++. .+++++.+|.+.. .|..+|+.
T Consensus 271 ~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~a-------------ld~~tG~~ 323 (488)
T cd00216 271 FYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYV-------------LDRTTGKL 323 (488)
T ss_pred EeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEE-------------EECCCCcE
Confidence 87532111111 1111 1333 5777778888888 99999887
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0046 Score=64.61 Aligned_cols=105 Identities=10% Similarity=-0.005 Sum_probs=73.7
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVD 107 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~la 107 (845)
|++++.|+..|.+++.+..+|.....+.....-=......+++..+..|+.|++....|..+..++...+...+...+-+
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~ 142 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPV 142 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccce
Confidence 56788999999999999999988777653332222234567899999999999999999999988888764444334445
Q ss_pred EccCCCEEEEEECCCeEEEEECCCC
Q psy467 108 FHPYGDYLCSGSLDSFIKLWDLRRK 132 (845)
Q Consensus 108 fspdg~~Lasgs~DG~I~IWDl~t~ 132 (845)
..|-...|+.+...|.+.--..++.
T Consensus 143 i~~g~~sly~a~t~G~vlavt~~~~ 167 (354)
T KOG4649|consen 143 IAPGDGSLYAAITAGAVLAVTKNPY 167 (354)
T ss_pred ecCCCceEEEEeccceEEEEccCCC
Confidence 5563334555555666555555443
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0011 Score=78.63 Aligned_cols=148 Identities=14% Similarity=0.155 Sum_probs=98.7
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCC-eEEEEEcCCCCEEEEEECCC-----cEEEEECCCC
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP-VESVQFGNGEETLSAGCQSG-----SIKIWNLAVP 90 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~-V~sLafSpdg~~LaSgs~DG-----tV~VWDl~tg 90 (845)
.|+| |++ ++..+|.|+.+|.|.+.+- .-+.++.++.+... |..+....+.++|++.+.|+ .|+||+++.-
T Consensus 27 ~isc--~~s-~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~ 102 (933)
T KOG2114|consen 27 AISC--CSS-STGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKV 102 (933)
T ss_pred ceeE--EcC-CCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEeccccc
Confidence 4544 455 7788999999999988874 34555777777776 55544444447888877654 4899998632
Q ss_pred ------cEE--EEEc-----CCCCCeEEEEEccCCCEEEEEECCCeEEEEEC--C--CCceEEEEcCCCCCeEEEEEecC
Q psy467 91 ------TVQ--RTLN-----GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL--R--RKGCIYTYRGHSKSINSIRFSPD 153 (845)
Q Consensus 91 ------~~v--~~l~-----~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl--~--t~~~l~~~~~h~~~V~sLafSPd 153 (845)
.++ ..+. ....++.+++.+.+-+.+|+|-.+|.|..+.= . .+....-......+|+++++..+
T Consensus 103 ~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d 182 (933)
T KOG2114|consen 103 DKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSD 182 (933)
T ss_pred CCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecC
Confidence 233 1222 23567899999999999999999999998842 1 12222222335678999999988
Q ss_pred CCEEEEEeCCCcEEE
Q psy467 154 GQWIASGGEDGVVRI 168 (845)
Q Consensus 154 g~~Lasgs~DG~I~I 168 (845)
++.++-+.....|.+
T Consensus 183 ~~s~lFv~Tt~~V~~ 197 (933)
T KOG2114|consen 183 GKSVLFVATTEQVML 197 (933)
T ss_pred CceeEEEEecceeEE
Confidence 876332233346777
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0002 Score=84.24 Aligned_cols=152 Identities=17% Similarity=0.265 Sum_probs=112.7
Q ss_pred EeccCCCcEEEEEEecC------------CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCC-----CCE
Q psy467 10 DFMAHGASVNCLALGKK------------SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG-----EET 72 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~------------dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpd-----g~~ 72 (845)
.|-.|.+.|.-..+.-. .|.++++|+.||+|.|-.+.+.+...++. ...++.+++++|+ .+.
T Consensus 53 ~~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~ 131 (846)
T KOG2066|consen 53 ALGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQ 131 (846)
T ss_pred eeccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhh
Confidence 35567777777666541 49999999999999999998888887776 5678999999997 567
Q ss_pred EEEEECCCcEEEEECCC--CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCe-----
Q psy467 73 LSAGCQSGSIKIWNLAV--PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI----- 145 (845)
Q Consensus 73 LaSgs~DGtV~VWDl~t--g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V----- 145 (845)
+++|+..| +.++.-.- .+....+....++|.++.|. |+++|-++.+| |++||+.+++.+..+......+
T Consensus 132 fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~f 207 (846)
T KOG2066|consen 132 FVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELF 207 (846)
T ss_pred eeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccC
Confidence 89998888 77765332 11122455678899999997 78999998887 8999999888877765433333
Q ss_pred -EEEEEecCCCEEEEEeCCCcEEE
Q psy467 146 -NSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 146 -~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..+.|.++. .|+.|=. .+|.+
T Consensus 208 pphl~W~~~~-~LVIGW~-d~v~i 229 (846)
T KOG2066|consen 208 PPHLHWQDED-RLVIGWG-DSVKI 229 (846)
T ss_pred CCceEecCCC-eEEEecC-CeEEE
Confidence 357787654 4555543 46777
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0014 Score=80.35 Aligned_cols=235 Identities=16% Similarity=0.145 Sum_probs=135.2
Q ss_pred CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCcee
Q psy467 100 KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSI 179 (845)
Q Consensus 100 ~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I 179 (845)
...|.++.|..+...++.+...|.|.+-|..+.... ....-...|.+++|+||+.+++..+.++++.+ .-
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~---------mT 137 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLF---------MT 137 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEE---------Ee
Confidence 357999999999999999999999999988765432 22334678999999999999999988888777 00
Q ss_pred EEEECCCCccCCC--CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeE
Q psy467 180 HVVDLSLVHPLGT--PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSA 257 (845)
Q Consensus 180 ~vWDl~tg~~l~~--~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l 257 (845)
.-|+.-..+.+.. ........+.|-.... .|.+..+ ...
T Consensus 138 ~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeT---qfrgs~g------------------------------------r~~ 178 (1265)
T KOG1920|consen 138 KDFEPIAEKPLDADDERKSKFVNVGWGRKET---QFRGSEG------------------------------------RQA 178 (1265)
T ss_pred ccccchhccccccccccccccceecccccce---eeecchh------------------------------------hhc
Confidence 0122222222100 0000011111110000 0000000 000
Q ss_pred EEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE-----EeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeC
Q psy467 258 IFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS-----SSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE 332 (845)
Q Consensus 258 ~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat-----gs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp 332 (845)
+..+.... ...........-+.+.|-.||+ ++|+ ......|+|||.+ |.+-.+-....+.=.+++|-|
T Consensus 179 ~~~~~~~e-k~~~~~~~~~~~~~IsWRgDg~-----~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkP 251 (1265)
T KOG1920|consen 179 ARQKIEKE-KALEQIEQDDHKTSISWRGDGE-----YFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKP 251 (1265)
T ss_pred cccccccc-ccccchhhccCCceEEEccCCc-----EEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecC
Confidence 00000000 0000011233446788888888 6666 3333799999987 554444333344557899999
Q ss_pred CCCEEEEEeC---CC-EEEEEecC---CceEEEecCCCCCeEEEEEc-CCceEEEE--------EEEEeeCCCC
Q psy467 333 GGECLLGGDT---EG-LKVYGWEP---ARQYDAQPMGWGKVQDLAVT-GTQLWFRR--------VGTWSHQDSG 390 (845)
Q Consensus 333 dG~~Lasgs~---DG-I~IWDl~t---gk~l~tl~~h~~~VtsVafS-dg~lLaaS--------VsiW~~d~~~ 390 (845)
.|..+++-.. |+ |.+|.-+. |...-.+......|..++|+ ++..|++- |.+|...+..
T Consensus 252 sgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 252 SGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred CCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence 9999998644 33 88876432 22222233344459999999 88888882 8899876553
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0016 Score=76.70 Aligned_cols=140 Identities=16% Similarity=0.169 Sum_probs=79.3
Q ss_pred CCCEEEEEeC-CCeEEEEECCCCeeEEEec-CCCCCeEEEEE-------------------cCCCCEEEEEE-CCCcEEE
Q psy467 27 SGQVLATGGD-DKKVNLWALGKSNCIMSLS-GHSTPVESVQF-------------------GNGEETLSAGC-QSGSIKI 84 (845)
Q Consensus 27 dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~-~h~~~V~sLaf-------------------Spdg~~LaSgs-~DGtV~V 84 (845)
+|++|+.-.. +..|-..++...++-+.+. .....+..++| ++||+.+...+ ..+.+.+
T Consensus 140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv 219 (635)
T PRK02888 140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA 219 (635)
T ss_pred ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence 5677777653 5566666665544433322 11222222332 34554443222 2466788
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC----------------------------------------CCeE
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL----------------------------------------DSFI 124 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~----------------------------------------DG~I 124 (845)
.|.++.+...++.... ....++++++|+++++.+. ++.|
T Consensus 220 ID~etmeV~~qV~Vdg-npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V 298 (635)
T PRK02888 220 VDAETMEVAWQVMVDG-NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKV 298 (635)
T ss_pred EECccceEEEEEEeCC-CcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEE
Confidence 8888887777765332 4466788888888877652 2346
Q ss_pred EEEECCC----C-ceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 125 KLWDLRR----K-GCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 125 ~IWDl~t----~-~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
.+.|..+ + ..+..+. -......++++|||+++++++ .+.++.+
T Consensus 299 ~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSV 347 (635)
T PRK02888 299 PVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTV 347 (635)
T ss_pred EEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEE
Confidence 6666655 2 2233332 344567777888887766554 3667777
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00052 Score=80.69 Aligned_cols=71 Identities=15% Similarity=0.281 Sum_probs=63.8
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
.+++++|+| ..-.||.|-.-|.+.+|...+.+.......|..+|..+.||++|+.++++..-|.|.+|..+
T Consensus 61 hatSLCWHp-e~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 61 HATSLCWHP-EEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ehhhhccCh-HHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 366799999 88889999999999999988877777777899999999999999999999999999999876
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00076 Score=77.61 Aligned_cols=113 Identities=15% Similarity=0.195 Sum_probs=83.1
Q ss_pred CcEEEEEEecCCCCEEEEE----eCCCe----EEEEECCCCeeE----EEecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 16 ASVNCLALGKKSGQVLATG----GDDKK----VNLWALGKSNCI----MSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTg----s~DG~----I~IWdl~t~~~i----~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
....++.||..+...+.|. +.+|. -.+|++...+.. .++ .....|.|++++|+.+.|+.|+.||.|.
T Consensus 206 ~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsi-pL~s~v~~ca~sp~E~kLvlGC~DgSii 284 (545)
T PF11768_consen 206 NDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSI-PLPSQVICCARSPSEDKLVLGCEDGSII 284 (545)
T ss_pred CCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEE-ecCCcceEEecCcccceEEEEecCCeEE
Confidence 3446778877555555554 23443 356766544321 222 3778999999999999999999999999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t 131 (845)
+||...+..... ...-..+.++|||+|..+++|+..|.+.+||+.-
T Consensus 285 LyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 285 LYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred EEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 999987633322 2445578999999999999999999999999853
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.014 Score=62.88 Aligned_cols=134 Identities=13% Similarity=0.157 Sum_probs=85.2
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE------------
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR------------ 94 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~------------ 94 (845)
.++.|+.|+.+| +.+++.........+. +...|..+...++-+.|++-+ |+.+.++++..-....
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~ 82 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRS 82 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccccc
Confidence 578899999998 8999983333222222 233499999999888777764 6999999997644333
Q ss_pred ---EEcCCCCCeEEEE--EccCCCEEEEEECCCeEEEEECCCC-----ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 95 ---TLNGHKSSITSVD--FHPYGDYLCSGSLDSFIKLWDLRRK-----GCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 95 ---~l~~h~~~V~~la--fspdg~~Lasgs~DG~I~IWDl~t~-----~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
.+. ....+...+ -...+...++......|.+|..... ...+.+. ....+.+++|. ++.++.|..++
T Consensus 83 ~~~~~~-~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~~~ 158 (275)
T PF00780_consen 83 LPTKLP-ETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTSKG 158 (275)
T ss_pred cccccc-ccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeCCc
Confidence 111 223344444 1123333444444558888887542 3445554 45778999999 66788877665
Q ss_pred cEEE
Q psy467 165 VVRI 168 (845)
Q Consensus 165 ~I~I 168 (845)
..+
T Consensus 159 -f~~ 161 (275)
T PF00780_consen 159 -FYL 161 (275)
T ss_pred -eEE
Confidence 555
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00063 Score=74.55 Aligned_cols=93 Identities=24% Similarity=0.310 Sum_probs=77.6
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC-CEEEE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIAS 159 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg-~~Las 159 (845)
|++.+..+.+....+..+...|..++|+|..+ ++..++.+..|+|.|+++..++..+..+ ..+++++|+-|. +++.+
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa 253 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA 253 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence 56666655555566677888899999999877 7888999999999999999999888877 789999999864 56888
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
|...|.|.+ ||++...
T Consensus 254 Gl~nG~Vlv-------------yD~R~~~ 269 (463)
T KOG1645|consen 254 GLQNGMVLV-------------YDMRQPE 269 (463)
T ss_pred eccCceEEE-------------EEccCCC
Confidence 889999999 9998654
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0074 Score=68.81 Aligned_cols=293 Identities=14% Similarity=0.215 Sum_probs=137.3
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-------
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV------- 89 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t------- 89 (845)
.|+++.|++ ...-|++|...|.|.||.....+... ......-..+.+.+- ...++.-.+-|+..
T Consensus 3 ~v~~vs~a~-~t~Elav~~~~GeVv~~k~~~n~~~~--~~~~~~~~~~~~~~~------~~~~~~~~l~di~~r~~~~~~ 73 (395)
T PF08596_consen 3 SVTHVSFAP-ETLELAVGLESGEVVLFKFGKNQNYG--NREQPPDLDYNFRRF------SLNNSPGKLTDISDRAPPSLK 73 (395)
T ss_dssp -EEEEEEET-TTTEEEEEETTS-EEEEEEEE--------------------S--------GGGSS-SEEE-GGG--TT-S
T ss_pred eEEEEEecC-CCceEEEEccCCcEEEEEcccCCCCC--ccCCCcccCcccccc------cccCCCcceEEehhhCCcccc
Confidence 589999999 66679999999999999875433222 001111111222110 00111222233321
Q ss_pred --CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc--C------CCCCeEEEEEec-----CC
Q psy467 90 --PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR--G------HSKSINSIRFSP-----DG 154 (845)
Q Consensus 90 --g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~--~------h~~~V~sLafSP-----dg 154 (845)
..+...+....++|++++.+.-| ++++|..+|.+.|.|++....+..-. . ....++++.|+. |+
T Consensus 74 ~gf~P~~l~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ 152 (395)
T PF08596_consen 74 EGFLPLTLLDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDG 152 (395)
T ss_dssp EEEEEEEEE---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSS
T ss_pred cccCchhheeccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCc
Confidence 12344455568899999998555 99999999999999998877776532 1 234577888863 33
Q ss_pred ---CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 155 ---QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 155 ---~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
-.+++|...|.+.+ |.+.- ..++.+...+.+.........+.+
T Consensus 153 ySSi~L~vGTn~G~v~~-------------fkIlp-----------------~~~g~f~v~~~~~~~~~~~~i~~I---- 198 (395)
T PF08596_consen 153 YSSICLLVGTNSGNVLT-------------FKILP-----------------SSNGRFSVQFAGATTNHDSPILSI---- 198 (395)
T ss_dssp SEEEEEEEEETTSEEEE-------------EEEEE------------------GGG-EEEEEEEEE--SS----EE----
T ss_pred ccceEEEEEeCCCCEEE-------------EEEec-----------------CCCCceEEEEeeccccCCCceEEE----
Confidence 36788888888888 54420 001111111111100000000001
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCC-CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPH-RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspd-g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
..++.+ +. .+......... .++ |.. ..+++++ ..+..++++...
T Consensus 199 -------------------------~~i~~~~G~-----~a~At~~~~~~--l~~-g~~-i~g~vVv-vSe~~irv~~~~ 243 (395)
T PF08596_consen 199 -------------------------IPINADTGE-----SALATISAMQG--LSK-GIS-IPGYVVV-VSESDIRVFKPP 243 (395)
T ss_dssp -------------------------EEEETTT-------B-B-BHHHHHG--GGG-T-----EEEEE-E-SSEEEEE-TT
T ss_pred -------------------------EEEECCCCC-----cccCchhHhhc--ccc-CCC-cCcEEEE-EcccceEEEeCC
Confidence 111111 11 00000000000 000 000 0013333 347789999998
Q ss_pred CCeEEEEecCCCCCEEEEEEe-----CCCCEEEEEeCCC-EEEEEecCCceEEEecCCC----CCeEEEEEc-CCceEEE
Q psy467 311 KFSLVSTTEKNSSTIRRLTFS-----EGGECLLGGDTEG-LKVYGWEPARQYDAQPMGW----GKVQDLAVT-GTQLWFR 379 (845)
Q Consensus 311 s~~~l~tl~gh~~~VtslafS-----pdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~----~~VtsVafS-dg~lLaa 379 (845)
+.+..+......-.+..+++- ..+..|++-..+| |++|.+..-+.+..+.-.. ..+...+++ +|+.+..
T Consensus 244 ~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~~~ 323 (395)
T PF08596_consen 244 KSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDIFYW 323 (395)
T ss_dssp ---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-EEEE
T ss_pred CCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEECCCCCEEEE
Confidence 887766655332334445553 3677888999999 9999999888776665432 345667778 8887766
Q ss_pred E-------EEEEeeCC
Q psy467 380 R-------VGTWSHQD 388 (845)
Q Consensus 380 S-------VsiW~~d~ 388 (845)
. +++|....
T Consensus 324 ~gpsE~~l~sv~~~~~ 339 (395)
T PF08596_consen 324 TGPSEIQLFSVWGEGR 339 (395)
T ss_dssp -SSSEEEEEEEES---
T ss_pred eCcccEEEEEEEccCC
Confidence 6 66775433
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.018 Score=66.69 Aligned_cols=75 Identities=12% Similarity=0.214 Sum_probs=62.8
Q ss_pred cccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 272 VPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 272 ~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
++....+.+.+++|+.. .++.|+.||.|.+||...+.... ....-..+.++|+|+|.++++|+..| +.+||+
T Consensus 256 ipL~s~v~~ca~sp~E~-----kLvlGC~DgSiiLyD~~~~~t~~--~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ 328 (545)
T PF11768_consen 256 IPLPSQVICCARSPSED-----KLVLGCEDGSIILYDTTRGVTLL--AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDM 328 (545)
T ss_pred EecCCcceEEecCcccc-----eEEEEecCCeEEEEEcCCCeeee--eeecccceEEEEcCCCcEEEEEcCCceEEEEEe
Confidence 35567889999999999 89999999999999998764332 23345689999999999999999999 999998
Q ss_pred cCC
Q psy467 351 EPA 353 (845)
Q Consensus 351 ~tg 353 (845)
.-+
T Consensus 329 ALs 331 (545)
T PF11768_consen 329 ALS 331 (545)
T ss_pred ecC
Confidence 754
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0093 Score=68.67 Aligned_cols=126 Identities=21% Similarity=0.171 Sum_probs=81.5
Q ss_pred EEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE---CC-CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE
Q psy467 40 VNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC---QS-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115 (845)
Q Consensus 40 I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs---~D-GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L 115 (845)
+.+=|.+ +.....+......+..-+|+|++..++..+ .. ..+.++++++++....+. ..+.-...+|+|||+.|
T Consensus 175 l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l 252 (425)
T COG0823 175 LALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKL 252 (425)
T ss_pred EEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEE
Confidence 4444433 555566665667788889999998766543 22 469999999886555544 33334467899999877
Q ss_pred EE-EECCCe--EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 116 CS-GSLDSF--IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 116 as-gs~DG~--I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
+. ...||. |.++|+..+. +..+....+.-..-.|+|||++++-.+ ..|.-.+
T Consensus 253 ~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I 308 (425)
T COG0823 253 AFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQI 308 (425)
T ss_pred EEEECCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcce
Confidence 54 445664 6667877665 334544444344678999999877654 4444444
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.1 Score=59.50 Aligned_cols=261 Identities=15% Similarity=0.172 Sum_probs=160.4
Q ss_pred cEEEEEEecCCCCEEEEEe-CCCeEEEEECCCCeeEEEe-cCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEE
Q psy467 17 SVNCLALGKKSGQVLATGG-DDKKVNLWALGKSNCIMSL-SGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs-~DG~I~IWdl~t~~~i~~l-~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v 93 (845)
....++..+ .+..+.... ....+...+.. ....... ..-...-..++.++.+..+. +...++.|.+.|..+.+..
T Consensus 32 ~~~~v~~~~-~g~~~~v~~~~~~~~~~~~~~-~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~ 109 (381)
T COG3391 32 GPGGVAVNP-DGTQVYVANSGSNDVSVIDAT-SNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVL 109 (381)
T ss_pred CCceeEEcC-ccCEEEEEeecCceeeecccc-cceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCccccee
Confidence 455667777 664444332 22245555544 2222221 11113455778888888544 4445689999998888877
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEEC---CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEe
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGSL---DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIG 169 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs~---DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~ 169 (845)
....... .-..++++++++.++++.. ++.+.+.|..+++.+........+ ..++++|+|+.++... .++.+.+
T Consensus 110 ~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~v- 186 (381)
T COG3391 110 GSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSV- 186 (381)
T ss_pred eEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEE-
Confidence 7765333 5578999999988877665 688999999988888875544444 8899999999766655 6778888
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
.|...... . ...... .
T Consensus 187 ------------i~~~~~~v--------------------~---~~~~~~-------~---------------------- 202 (381)
T COG3391 187 ------------IDTSGNSV--------------------V---RGSVGS-------L---------------------- 202 (381)
T ss_pred ------------EeCCCcce--------------------e---cccccc-------c----------------------
Confidence 77544333 0 000000 0
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC--CCeEEEEECCCCeEEEEecCCCC-CEE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA--DRTVNFWDLEKFSLVSTTEKNSS-TIR 326 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~--DG~I~IWDl~s~~~l~tl~gh~~-~Vt 326 (845)
.........++++|+|.. ..++... ++.+...|..++.....-..-.. ...
T Consensus 203 ----------------------~~~~~~P~~i~v~~~g~~----~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~ 256 (381)
T COG3391 203 ----------------------VGVGTGPAGIAVDPDGNR----VYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPR 256 (381)
T ss_pred ----------------------cccCCCCceEEECCCCCE----EEEEeccCCCceEEEEeCCCceEEEeccccccCCCC
Confidence 000011123344444442 2233222 36899999998877665221112 567
Q ss_pred EEEEeCCCCEEEEEeCC-C-EEEEEecCCceEEEecCCCC---CeEEEEEc
Q psy467 327 RLTFSEGGECLLGGDTE-G-LKVYGWEPARQYDAQPMGWG---KVQDLAVT 372 (845)
Q Consensus 327 slafSpdG~~Lasgs~D-G-I~IWDl~tgk~l~tl~~h~~---~VtsVafS 372 (845)
.+.++|+|+++.+.... + +.+.|..+......+..... .+..+++.
T Consensus 257 ~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~ 307 (381)
T COG3391 257 GVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAIS 307 (381)
T ss_pred ceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceeccce
Confidence 78999999999988655 4 99999988877766554332 34455544
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.025 Score=60.32 Aligned_cols=200 Identities=8% Similarity=0.121 Sum_probs=112.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCC-CCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGH-STPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h-~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
.+.+.+-...+..|+|+|+++.++++....+.|...+. +|+.++++.-. .+....|++..++.++++.-.++.+.+++
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~ 92 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFT 92 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence 46788888889999999966778888888999988886 57787776533 35688999988887777665689999998
Q ss_pred CCCCc------EEEEEc-----CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC---CceEEEE--------cCCCCC
Q psy467 87 LAVPT------VQRTLN-----GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR---KGCIYTY--------RGHSKS 144 (845)
Q Consensus 87 l~tg~------~v~~l~-----~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t---~~~l~~~--------~~h~~~ 144 (845)
+.... ....+. .++..+-.++|.+.++.|+++-...-..+|.+.. ...+... ......
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 172 (248)
T PF06977_consen 93 IDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRD 172 (248)
T ss_dssp E----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS-
T ss_pred EeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecc
Confidence 84321 112221 2445689999999888888777776666666643 2111111 113346
Q ss_pred eEEEEEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEE
Q psy467 145 INSIRFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRK 211 (845)
Q Consensus 145 V~sLafSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~ 211 (845)
+.+++++|.. ++++....+..+.. +......+..+++..+..--...-.+.-.+++.++|++..
T Consensus 173 ~S~l~~~p~t~~lliLS~es~~l~~---~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI 237 (248)
T PF06977_consen 173 LSGLSYDPRTGHLLILSDESRLLLE---LDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI 237 (248)
T ss_dssp --EEEEETTTTEEEEEETTTTEEEE---E-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE
T ss_pred ccceEEcCCCCeEEEEECCCCeEEE---ECCCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE
Confidence 7899999965 45555555666655 3334444455555554221111124466888999887543
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.13 Score=61.04 Aligned_cols=149 Identities=11% Similarity=0.105 Sum_probs=93.5
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCCCC-eEEEEEcC--CCCEEEEEEC------CCcEEEEECCCCcEEEEEcCC
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTP-VESVQFGN--GEETLSAGCQ------SGSIKIWNLAVPTVQRTLNGH 99 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~-V~sLafSp--dg~~LaSgs~------DGtV~VWDl~tg~~v~~l~~h 99 (845)
..++.++.|+.+.-.|..+|+.+......... -..+.-+| .+..++++.. +|.|.-+|.++|+.+..+..-
T Consensus 121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~ 200 (527)
T TIGR03075 121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTV 200 (527)
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCc
Confidence 45777888999999999999998766421110 00111122 1234555432 689999999999988776421
Q ss_pred CC-------------------------------CeE-EEEEccCCCEEEEEECC-----C-----------eEEEEECCC
Q psy467 100 KS-------------------------------SIT-SVDFHPYGDYLCSGSLD-----S-----------FIKLWDLRR 131 (845)
Q Consensus 100 ~~-------------------------------~V~-~lafspdg~~Lasgs~D-----G-----------~I~IWDl~t 131 (845)
.. .+. .+++.+...+++.+..+ + +|.-.|+++
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~T 280 (527)
T TIGR03075 201 PGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDT 280 (527)
T ss_pred CCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcccc
Confidence 11 111 23556656666655421 2 688889999
Q ss_pred CceEEEEcCCCCCeEEE---------EEecCCC---EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 132 KGCIYTYRGHSKSINSI---------RFSPDGQ---WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 132 ~~~l~~~~~h~~~V~sL---------afSPdg~---~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
|+....++.....++.. .+..+|+ .++.+..+|.+++ .|..+|+.+
T Consensus 281 G~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~v-------------lDr~tG~~i 338 (527)
T TIGR03075 281 GKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYV-------------LDRTNGKLL 338 (527)
T ss_pred CCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEE-------------EECCCCcee
Confidence 99988886543333322 2223555 6677888888888 999998875
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.044 Score=64.55 Aligned_cols=112 Identities=7% Similarity=0.075 Sum_probs=73.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCC------CeE--EEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCC
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHST------PVE--SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGH 99 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~------~V~--sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h 99 (845)
+..+++++.++.+.-.|..+++.+.++..... .+. .+... ++..++.++.+|.|.-+|.++|+.+..+...
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~ 139 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN 139 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence 34566777789999999999998877653322 010 01111 2267888888999999999999999887643
Q ss_pred CCC--eEEEEEcc--CCCEEEEEE---------CCCeEEEEECCCCceEEEEcC
Q psy467 100 KSS--ITSVDFHP--YGDYLCSGS---------LDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 100 ~~~--V~~lafsp--dg~~Lasgs---------~DG~I~IWDl~t~~~l~~~~~ 140 (845)
... -..+.-+| .+..++.++ .+|.+..+|..+++.+..+..
T Consensus 140 ~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~ 193 (488)
T cd00216 140 DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYT 193 (488)
T ss_pred CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeec
Confidence 221 00111111 124555554 368899999999999888754
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.027 Score=65.11 Aligned_cols=144 Identities=17% Similarity=0.154 Sum_probs=84.1
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
+.+-...-....+.++| +|++++++ .||...|+.......... +.-...+|.+. +.+|+-...++|.|+.--
T Consensus 26 k~lg~~~~~p~~ls~np-ngr~v~V~-g~geY~iyt~~~~r~k~~-----G~g~~~vw~~~-n~yAv~~~~~~I~I~kn~ 97 (443)
T PF04053_consen 26 KELGSCEIYPQSLSHNP-NGRFVLVC-GDGEYEIYTALAWRNKAF-----GSGLSFVWSSR-NRYAVLESSSTIKIYKNF 97 (443)
T ss_dssp EEEEE-SS--SEEEE-T-TSSEEEEE-ETTEEEEEETTTTEEEEE-----EE-SEEEE-TS-SEEEEE-TTS-EEEEETT
T ss_pred ccCCCCCcCCeeEEECC-CCCEEEEE-cCCEEEEEEccCCccccc-----CceeEEEEecC-ccEEEEECCCeEEEEEcC
Confidence 44444555688999999 99999884 577888888554444332 23445788884 456777678889996332
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+......+.. ...+..|-. |..|+..+.+ .|.+||+.+++.++.+... .|..+.|+++|.+++..+.+ .+.+
T Consensus 98 ~~~~~k~i~~-~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~i 169 (443)
T PF04053_consen 98 KNEVVKSIKL-PFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYI 169 (443)
T ss_dssp EE-TT------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEE
T ss_pred ccccceEEcC-CcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEE
Confidence 2332233432 122444332 7777776654 8999999999999999733 38999999999999998876 5666
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.07 Score=61.39 Aligned_cols=83 Identities=13% Similarity=0.104 Sum_probs=56.1
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCC-CCCeEEEEE
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMG-WGKVQDLAV 371 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h-~~~VtsVaf 371 (845)
..+....++.+.+.+-...+. +. ..+++..+++||+|++||.-..+| +.+...+-.+.+..+... ......+.|
T Consensus 192 ~~i~~~~g~~i~~i~~~~~~~---i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~W 267 (410)
T PF04841_consen 192 VEILLANGETIYIIDENSFKQ---ID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAW 267 (410)
T ss_pred eEEEEecCCEEEEEEcccccc---cc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEE
Confidence 344444556666555433222 22 246899999999999999999999 888877666666666554 467889999
Q ss_pred cCCceEEEE
Q psy467 372 TGTQLWFRR 380 (845)
Q Consensus 372 Sdg~lLaaS 380 (845)
..+.-++.+
T Consensus 268 CG~dav~l~ 276 (410)
T PF04841_consen 268 CGNDAVVLS 276 (410)
T ss_pred ECCCcEEEE
Confidence 944444444
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.14 Score=57.44 Aligned_cols=138 Identities=12% Similarity=0.023 Sum_probs=75.0
Q ss_pred EEecCCCCEEEEEe-CCC--eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC
Q psy467 22 ALGKKSGQVLATGG-DDK--KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 22 afSp~dg~~LaTgs-~DG--~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~ 98 (845)
+|.+ +|+.|+.++ .|| .+.+.|+.+++..+.-.+.........++++++.++-......|.-.|+++.+....+..
T Consensus 42 ~ft~-dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~ 120 (386)
T PF14583_consen 42 CFTD-DGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEV 120 (386)
T ss_dssp -B-T-TS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred CcCC-CCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEEC
Confidence 4455 676655554 455 566778888876664443323333566788888887766677899999999876555555
Q ss_pred CCCCeEEEEEc--cCCCEEEEEE---C-------------------CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC
Q psy467 99 HKSSITSVDFH--PYGDYLCSGS---L-------------------DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 99 h~~~V~~lafs--pdg~~Lasgs---~-------------------DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg 154 (845)
....+-...|. .|+..++-.- . ...|.-.|+.+|+....+. ...-+..+.|+|..
T Consensus 121 p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~d 199 (386)
T PF14583_consen 121 PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPTD 199 (386)
T ss_dssp -TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE-ESS-EEEEEEETTE
T ss_pred CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe-cCccccCcccCCCC
Confidence 55555555664 3555544321 1 2346666778776655544 45567889999955
Q ss_pred CEEEEEe
Q psy467 155 QWIASGG 161 (845)
Q Consensus 155 ~~Lasgs 161 (845)
..+++=|
T Consensus 200 p~li~fC 206 (386)
T PF14583_consen 200 PTLIMFC 206 (386)
T ss_dssp EEEEEEE
T ss_pred CCEEEEe
Confidence 4444433
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.014 Score=67.15 Aligned_cols=149 Identities=19% Similarity=0.165 Sum_probs=96.4
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEE---eCC-CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCc--E
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATG---GDD-KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGS--I 82 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTg---s~D-G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGt--V 82 (845)
.+..-...+..-+|+| ++..++.. ... ..+.++++.+++....+. ....-...+|+|||+.|+.+. .||. |
T Consensus 187 ~l~~~~~~~~~p~ws~-~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~i 264 (425)
T COG0823 187 KLTDSGSLILTPAWSP-DGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDI 264 (425)
T ss_pred EecccCcceeccccCc-CCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccE
Confidence 3444455677788998 67665544 222 469999998877655554 333445568999999887654 4555 5
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
.+.|+.++. ...+....+.-..-.|+|||++++..+ ..| .|.+++.+.+.. ..+....+.-..-.|+|||++++.
T Consensus 265 y~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~ 342 (425)
T COG0823 265 YLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVF 342 (425)
T ss_pred EEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEE
Confidence 666777665 333543444444678999999887665 344 467777765544 444333333347889999999887
Q ss_pred EeC
Q psy467 160 GGE 162 (845)
Q Consensus 160 gs~ 162 (845)
.+.
T Consensus 343 ~~~ 345 (425)
T COG0823 343 ESS 345 (425)
T ss_pred Eec
Confidence 764
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.097 Score=57.76 Aligned_cols=143 Identities=11% Similarity=0.035 Sum_probs=84.2
Q ss_pred EEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC--
Q psy467 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG-- 98 (845)
Q Consensus 21 LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~-- 98 (845)
-.|.+..+.++.+--..+.|.-|+..+++.. .+. +...+.++..-..+..|+++ +..+.+++.+++..+..+..
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~-~~~-~p~~~~~~~~~d~~g~Lv~~--~~g~~~~~~~~~~~~t~~~~~~ 105 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETGKKR-VFP-SPGGFSSGALIDAGGRLIAC--EHGVRLLDPDTGGKITLLAEPE 105 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcCceE-EEE-CCCCcccceeecCCCeEEEE--ccccEEEeccCCceeEEecccc
Confidence 3566634446666667778888888755432 222 23334555554455556655 34567777776665333321
Q ss_pred ---CCCCeEEEEEccCCCEEEEEEC-----------CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC-
Q psy467 99 ---HKSSITSVDFHPYGDYLCSGSL-----------DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED- 163 (845)
Q Consensus 99 ---h~~~V~~lafspdg~~Lasgs~-----------DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D- 163 (845)
.....+.....|+|.+.++... -|.|+.+|. .+..+..+..+-..-+.|+||||++.|+.+...
T Consensus 106 ~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~ 184 (307)
T COG3386 106 DGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPA 184 (307)
T ss_pred CCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCC
Confidence 1234567888899876655333 133444443 456666665555566789999999888777553
Q ss_pred CcEEE
Q psy467 164 GVVRI 168 (845)
Q Consensus 164 G~I~I 168 (845)
+.|.-
T Consensus 185 ~~i~r 189 (307)
T COG3386 185 NRIHR 189 (307)
T ss_pred CeEEE
Confidence 55555
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.18 Score=57.81 Aligned_cols=100 Identities=12% Similarity=0.203 Sum_probs=64.4
Q ss_pred eEEEEEcCCCCEEEEE-ECCC----cEEEEECCCCcEEEEE-cCCCCCeEEEEEccCCCEEEEEECCC-----------e
Q psy467 61 VESVQFGNGEETLSAG-CQSG----SIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDS-----------F 123 (845)
Q Consensus 61 V~sLafSpdg~~LaSg-s~DG----tV~VWDl~tg~~v~~l-~~h~~~V~~lafspdg~~Lasgs~DG-----------~ 123 (845)
+....++|++++||.+ +..| .|+++|+++|+.+... ... ....+.|.++++.|+....+. .
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 3467889999998865 3334 5999999999766532 211 123499999988776655332 3
Q ss_pred EEEEECCCCce--EEEEcCCCCC--eEEEEEecCCCEEEEEeC
Q psy467 124 IKLWDLRRKGC--IYTYRGHSKS--INSIRFSPDGQWIASGGE 162 (845)
Q Consensus 124 I~IWDl~t~~~--l~~~~~h~~~--V~sLafSPdg~~Lasgs~ 162 (845)
|+.|.+.+... ...+...... ...+..++|+++++....
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~ 246 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSS 246 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEE
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEE
Confidence 88888876542 2334333332 567889999998776543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.14 Score=58.44 Aligned_cols=147 Identities=16% Similarity=0.208 Sum_probs=105.1
Q ss_pred EEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC---CCcEEEEECCCCcEEE
Q psy467 19 NCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ---SGSIKIWNLAVPTVQR 94 (845)
Q Consensus 19 ~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~---DGtV~VWDl~tg~~v~ 94 (845)
.++++++ .+. ..++...++.|.+.|..+.........-. ....++++++++.+..+.. ++++.+.|..+++...
T Consensus 77 ~~i~v~~-~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~ 154 (381)
T COG3391 77 AGVAVNP-AGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTA 154 (381)
T ss_pred cceeeCC-CCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEE
Confidence 4667777 555 55555566899999987777766654322 6778999999988777655 6889999999998888
Q ss_pred EEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEE-E---EcCCCCCeEEEEEecCCCEEEEEeCC---CcE
Q psy467 95 TLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIY-T---YRGHSKSINSIRFSPDGQWIASGGED---GVV 166 (845)
Q Consensus 95 ~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~-~---~~~h~~~V~sLafSPdg~~Lasgs~D---G~I 166 (845)
.......+ ..+++.|+|+.++++. .++.|.+.|........ . ..........+.++|+|+.+.+.... +.+
T Consensus 155 ~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v 233 (381)
T COG3391 155 TIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNV 233 (381)
T ss_pred EEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceE
Confidence 87655455 8899999999776665 78899999977655543 1 01122345678999999876655433 366
Q ss_pred EE
Q psy467 167 RI 168 (845)
Q Consensus 167 ~I 168 (845)
..
T Consensus 234 ~~ 235 (381)
T COG3391 234 LK 235 (381)
T ss_pred EE
Confidence 66
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.29 Score=56.40 Aligned_cols=65 Identities=15% Similarity=0.311 Sum_probs=46.3
Q ss_pred EEEecCCCCEEEEEeCC----------C-eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 21 LALGKKSGQVLATGGDD----------K-KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 21 LafSp~dg~~LaTgs~D----------G-~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
++.+| .|..+|....+ . .|.||+. .|+.+.++.-..+.|.++.|+.+. .|++...||.++++|+.
T Consensus 34 va~a~-~gGpIAi~~d~~k~~~~~~~~p~~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 34 VAVAP-YGGPIAIIRDESKLVPVGSAKPNSIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEcC-CCceEEEEecCcccccccCCCCcEEEEECC-CCCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCC
Confidence 45556 55566665443 1 5889986 466776665555899999999865 45566689999999997
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.047 Score=64.21 Aligned_cols=112 Identities=16% Similarity=0.262 Sum_probs=85.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE-cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-
Q psy467 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC- 134 (845)
Q Consensus 57 h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l-~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~- 134 (845)
|...|.--+++..+++++.|+..|.|.+++-..+.....- .+..+.+..+..+++..++|.|+..|.|.++-+....+
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~ 111 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR 111 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence 4455666667778999999999999999998876544332 23445566677888888889999999999998865322
Q ss_pred --E--EEE-cCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 135 --I--YTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 135 --l--~~~-~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+ ... +.|...|++++|++|+..+++|...|+|..
T Consensus 112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~ 150 (726)
T KOG3621|consen 112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVL 150 (726)
T ss_pred cceeeccccccCCceEEEEEecccccEEeecCCCceEEE
Confidence 1 111 236789999999999999999999999988
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.02 Score=66.15 Aligned_cols=225 Identities=12% Similarity=0.172 Sum_probs=107.7
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCC-----------ceEEEecCC
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA-----------RQYDAQPMG 362 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tg-----------k~l~tl~~h 362 (845)
+|...+.+ .|.+||+.+++.+..+... +|..+.||++|.+++..+.+.+.|++.+.. ..+..+..-
T Consensus 119 LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e~~f~~~~E~ 195 (443)
T PF04053_consen 119 LLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVEDAFELIHEI 195 (443)
T ss_dssp SEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE
T ss_pred EEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCchhceEEEEEe
Confidence 56665544 8999999999999999853 489999999999999999999777776543 133444333
Q ss_pred CCCeEEEEEcCCceEEEE---EEEEeeCCCCCccccCCCCCC-CCCCCCCCccccccCCCCC---CccCCcccc------
Q psy467 363 WGKVQDLAVTGTQLWFRR---VGTWSHQDSGFSTLDSYSAGS-PVSTMGRERDQIVPMNLSA---PIGLDMEQF------ 429 (845)
Q Consensus 363 ~~~VtsVafSdg~lLaaS---VsiW~~d~~~~~~~~~~~~~~-p~~~~~~~~~~~vp~~~~~---~~~~d~~~~------ 429 (845)
...|.+.+|.++-++.++ +.-+. . .....+..+..+- ...-++ ....+.=..+.. ...+|+..+
T Consensus 196 ~~~IkSg~W~~d~fiYtT~~~lkYl~-~-Ge~~~i~~ld~~~yllgy~~-~~~~ly~~Dr~~~v~~~~ld~~~~~fk~av 272 (443)
T PF04053_consen 196 SERIKSGCWVEDCFIYTTSNHLKYLV-N-GETGIIAHLDKPLYLLGYLP-KENRLYLIDRDGNVISYELDLSELEFKTAV 272 (443)
T ss_dssp -S--SEEEEETTEEEEE-TTEEEEEE-T-TEEEEEEE-SS--EEEEEET-TTTEEEEE-TT--EEEEE--HHHHHHHHHH
T ss_pred cceeEEEEEEcCEEEEEcCCeEEEEE-c-CCcceEEEcCCceEEEEEEc-cCCEEEEEECCCCEEEEEECHHHHHHHHHH
Confidence 578999999955666666 44422 2 1122222222110 000000 011111111110 111221110
Q ss_pred CCCcccccCCCCcCCh-hHHHHHH-hhchHHHHHHHHHhh-h---------hHHHHHHHHhcCChhHHHHHHHhcCCcee
Q psy467 430 LPKSYQTHQGKSSMSE-SELMSTI-FNGHDKMMAVLRNRQ-R---------SLGLVYMAVNNKNMEAGIDTALSMNDGTV 497 (845)
Q Consensus 430 ~p~~~~~~~~~~~~~~-~~~~~~~-~~~h~~~~~~l~~R~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (845)
+..+.. .-..+-. +.++..+ .+.++.+...|++.. . --.++.-++.-||++.|.+.|-+.+++..
T Consensus 273 ~~~d~~---~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~D~~~rFeLAl~lg~L~~A~~~a~~~~~~~~ 349 (443)
T PF04053_consen 273 LRGDFE---EVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFVTDPDHRFELALQLGNLDIALEIAKELDDPEK 349 (443)
T ss_dssp HTT-HH---H-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS-HHHHHHHHHHCT-HHHHHHHCCCCSTHHH
T ss_pred HcCChh---hhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhcCChHHHhHHHHhcCCHHHHHHHHHhcCcHHH
Confidence 111100 0001111 2222111 134667777777743 1 33566777888888888888877776553
Q ss_pred eeehhhhhcc-chhhhHHHHHhhhhhhHHHh
Q psy467 498 MIDLFKSMLG-QGYKKCVKVYNALMPVKSVL 527 (845)
Q Consensus 498 ~~~~~~~~~~-~~~~kc~~c~~~l~~~~~~~ 527 (845)
--=|...-|. -.++--..||....+...++
T Consensus 350 W~~Lg~~AL~~g~~~lAe~c~~k~~d~~~L~ 380 (443)
T PF04053_consen 350 WKQLGDEALRQGNIELAEECYQKAKDFSGLL 380 (443)
T ss_dssp HHHHHHHHHHTTBHHHHHHHHHHCT-HHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHhhcCccccH
Confidence 2223333222 34566777888777777764
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.13 E-value=9.5e-05 Score=84.82 Aligned_cols=153 Identities=20% Similarity=0.318 Sum_probs=108.4
Q ss_pred CCCcEEEEEEecCCC-CEEEEEeCCCeEEEEECCCCee--EEEecCCCCCeEEEEEcC-CCCEEEEEEC----CCcEEEE
Q psy467 14 HGASVNCLALGKKSG-QVLATGGDDKKVNLWALGKSNC--IMSLSGHSTPVESVQFGN-GEETLSAGCQ----SGSIKIW 85 (845)
Q Consensus 14 H~~~V~~LafSp~dg-~~LaTgs~DG~I~IWdl~t~~~--i~~l~~h~~~V~sLafSp-dg~~LaSgs~----DGtV~VW 85 (845)
-...+.|++++-+.. .++++|..+|.|.+-....... .....+|...+++++|++ |.+.||+|-. |..+.||
T Consensus 55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 445688888876333 5888999999999988754322 234567888999999998 6677887743 6779999
Q ss_pred ECCCC--cEE--EEEcC-CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec-CCCEEEE
Q psy467 86 NLAVP--TVQ--RTLNG-HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIAS 159 (845)
Q Consensus 86 Dl~tg--~~v--~~l~~-h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP-dg~~Las 159 (845)
|+.++ .+. ..|.+ .......++|..+.+.+.+|.....++++|++.. +.....-.+..+..+..+| .++++++
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs-~~~~~svnTk~vqG~tVdp~~~nY~cs 213 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQS-LDSVSSVNTKYVQGITVDPFSPNYFCS 213 (783)
T ss_pred ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhh-hhhhhhhhhhhcccceecCCCCCceec
Confidence 99876 221 12222 3344668899988889999999889999999832 2222222344567788888 7888877
Q ss_pred EeCCCcEEE
Q psy467 160 GGEDGVVRI 168 (845)
Q Consensus 160 gs~DG~I~I 168 (845)
-. ||.|.+
T Consensus 214 ~~-dg~iAi 221 (783)
T KOG1008|consen 214 NS-DGDIAI 221 (783)
T ss_pred cc-cCceee
Confidence 65 899999
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0022 Score=74.03 Aligned_cols=93 Identities=11% Similarity=0.162 Sum_probs=78.2
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeE-EEEEcCCCCEEEEEECCCcEEEEECCCCcEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE-SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~-sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
...|.-+.|+| .-+++|++..+|.|.+..+. ...+.++.-|...++ +++|.|||+.||.|-.||+|++.|++++..+
T Consensus 20 ~~~i~~~ewnP-~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l 97 (665)
T KOG4640|consen 20 PINIKRIEWNP-KMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL 97 (665)
T ss_pred ccceEEEEEcC-ccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence 45688899999 89999999999999999987 777888887777777 9999999999999999999999999998777
Q ss_pred EEEc-CCCCCeEEEEEc
Q psy467 94 RTLN-GHKSSITSVDFH 109 (845)
Q Consensus 94 ~~l~-~h~~~V~~lafs 109 (845)
..+. .-...|.++-|.
T Consensus 98 ~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 98 VSFLFSVETDISKGIWD 114 (665)
T ss_pred eccccccccchheeecc
Confidence 6631 234456666665
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0026 Score=73.53 Aligned_cols=94 Identities=17% Similarity=0.276 Sum_probs=80.1
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeE-EEEEccCCCEEEEEECCCeEEEEECCCCceEE
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSIT-SVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIY 136 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~-~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~ 136 (845)
...|.-+.|+|.-..+|.+..+|.|.+..+. .+.+.++.-+..+++ +++|.|||+.|++|-.||+|++.|+.++..+.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 4568889999999999999999999999998 777888887777777 99999999999999999999999999988777
Q ss_pred EEc-CCCCCeEEEEEec
Q psy467 137 TYR-GHSKSINSIRFSP 152 (845)
Q Consensus 137 ~~~-~h~~~V~sLafSP 152 (845)
.+. .....|.++-|++
T Consensus 99 ~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 99 SFLFSVETDISKGIWDR 115 (665)
T ss_pred ccccccccchheeeccc
Confidence 632 2445677777763
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.71 Score=52.88 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=72.7
Q ss_pred cEEEEEEecCCCCEEEEE-eCCC----eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC-----------
Q psy467 17 SVNCLALGKKSGQVLATG-GDDK----KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG----------- 80 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTg-s~DG----~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG----------- 80 (845)
.+...++|| +|+++|.+ +..| .|+++|+.+++.+...-... .-..+.|.++++.|+....+.
T Consensus 125 ~~~~~~~Sp-dg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 125 SLGGFSVSP-DGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EEEEEEETT-TSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred EeeeeeECC-CCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 344678899 89988866 3333 59999999998765331111 122399999988877665433
Q ss_pred cEEEEECCCCcE--EEEEcCCCCC--eEEEEEccCCCEEEEEECC----CeEEEEECCCC
Q psy467 81 SIKIWNLAVPTV--QRTLNGHKSS--ITSVDFHPYGDYLCSGSLD----SFIKLWDLRRK 132 (845)
Q Consensus 81 tV~VWDl~tg~~--v~~l~~h~~~--V~~lafspdg~~Lasgs~D----G~I~IWDl~t~ 132 (845)
.|..|.+.+... ...+...... ...+..++|+++++..... ..+.+.|+..+
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 378888877632 2444433332 5678899999988764432 34777888764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.1 Score=58.65 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=62.0
Q ss_pred cCCCCEEEEEE---------CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE
Q psy467 67 GNGEETLSAGC---------QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137 (845)
Q Consensus 67 Spdg~~LaSgs---------~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~ 137 (845)
|||+++++... ..+.+.++|+.+++...... ....+....|+|+|+.++... ++.|.+++..++...+.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~-~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~l 78 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTP-PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQL 78 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS--EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEES
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcC-CccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEe
Confidence 57888877643 24679999999876444333 356788999999999998876 57899999877643322
Q ss_pred EcCC-----------------CCCeEEEEEecCCCEEEEEe
Q psy467 138 YRGH-----------------SKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 138 ~~~h-----------------~~~V~sLafSPdg~~Lasgs 161 (845)
-... -+.-..+.|||||++||...
T Consensus 79 T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~ 119 (353)
T PF00930_consen 79 TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLR 119 (353)
T ss_dssp ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEE
T ss_pred ccccceeEEcCccceeccccccccccceEECCCCCEEEEEE
Confidence 1111 11235688999999988764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.079 Score=49.14 Aligned_cols=102 Identities=18% Similarity=0.266 Sum_probs=72.9
Q ss_pred cEEEEEEecCC---CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE
Q psy467 17 SVNCLALGKKS---GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 17 ~V~~LafSp~d---g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
.|++|+++.-+ .+.|++|+.|..|++|+-+ +.+..+. ..+.|.+++-... ..++.+..+|+|-+|+-. ..+
T Consensus 1 ~V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~Rl 74 (111)
T PF14783_consen 1 NVTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRS--QRL 74 (111)
T ss_pred CeeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCc--cee
Confidence 37788876533 3689999999999999854 6677776 4567888877765 678889999999999863 445
Q ss_pred EEEcCCCCCeEEEEEcc-C--C-CEEEEEECCCeEE
Q psy467 94 RTLNGHKSSITSVDFHP-Y--G-DYLCSGSLDSFIK 125 (845)
Q Consensus 94 ~~l~~h~~~V~~lafsp-d--g-~~Lasgs~DG~I~ 125 (845)
..++. +..+.++++.. + | ..|++|-.+|.|-
T Consensus 75 WRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 75 WRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 55553 33466666554 2 2 3688888888764
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.29 Score=52.39 Aligned_cols=116 Identities=15% Similarity=0.211 Sum_probs=71.9
Q ss_pred EEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEEEEcCC-CCCeEEEEEccCCCEEEEEECCCeEEEEEC
Q psy467 52 MSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~~l~~h-~~~V~~lafspdg~~Lasgs~DG~I~IWDl 129 (845)
+.+.+-...+..|+|+|+.+.|+ +....+.|...+.+ |+.++++.-. .+..-.|++..++.++++.-.++.+.++++
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~ 93 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI 93 (248)
T ss_dssp EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence 34556666799999999866554 45557788888864 7888777533 356889999888877766656899999988
Q ss_pred CCCc------eEEEEc-----CCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 130 RRKG------CIYTYR-----GHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 130 ~t~~------~l~~~~-----~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.... ....+. .++..+-.++|++.++.|+++-+..-..+
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l 143 (248)
T PF06977_consen 94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRL 143 (248)
T ss_dssp ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEE
T ss_pred eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhh
Confidence 4321 112221 24556899999998888777766655566
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.00074 Score=77.76 Aligned_cols=156 Identities=19% Similarity=0.295 Sum_probs=104.8
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEe----CCCeEEEEECCCC--eeE--EEecC-CCCCeEEEEEcCCCCEEEEEECCC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGG----DDKKVNLWALGKS--NCI--MSLSG-HSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs----~DG~I~IWdl~t~--~~i--~~l~~-h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
...+|....++++|++-|.+.||.|- .|..+.|||+.++ .+. ..+.+ ......+++|-.+.+.+.+|....
T Consensus 97 ~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr 176 (783)
T KOG1008|consen 97 VTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSR 176 (783)
T ss_pred ecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccc
Confidence 34567789999999997778888874 3567999999776 221 12222 345567899998999999999999
Q ss_pred cEEEEECCCC-cEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEEC-CCC-ceEEEEcC----CCCCeEEEEEec
Q psy467 81 SIKIWNLAVP-TVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDL-RRK-GCIYTYRG----HSKSINSIRFSP 152 (845)
Q Consensus 81 tV~VWDl~tg-~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl-~t~-~~l~~~~~----h~~~V~sLafSP 152 (845)
.+.++|++.. .....+ .+..+..+...| ..+++++.. ||.|.+||. +.- .++..+.. ....+..++|+|
T Consensus 177 ~~~ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycP 253 (783)
T KOG1008|consen 177 SVHIFDLRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCP 253 (783)
T ss_pred hhhhhhhhhhhhhhhhh--hhhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEecc
Confidence 9999999832 222222 344577788888 667777665 999999994 221 22222221 223588999999
Q ss_pred CC-CEEEEEe-CCCcEEE
Q psy467 153 DG-QWIASGG-EDGVVRI 168 (845)
Q Consensus 153 dg-~~Lasgs-~DG~I~I 168 (845)
.. ..+++.. ..++|+.
T Consensus 254 trtglla~l~RdS~tIrl 271 (783)
T KOG1008|consen 254 TRTGLLAVLSRDSITIRL 271 (783)
T ss_pred CCcchhhhhccCcceEEE
Confidence 43 2344444 4467777
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=96.76 E-value=2 Score=51.26 Aligned_cols=111 Identities=8% Similarity=0.068 Sum_probs=71.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCC-CCeE---E-------EEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHS-TPVE---S-------VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~-~~V~---s-------LafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
+..+++++.++.|.-.|..+|+.+.++.... ..+. + +++ .+..++.++.++.|.-.|.++|+.+...
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 3567777778899999999999888765321 1111 1 122 2356777888999999999999998776
Q ss_pred cCCCCC-eEEEEEcc--CCCEEEEEE------CCCeEEEEECCCCceEEEEcC
Q psy467 97 NGHKSS-ITSVDFHP--YGDYLCSGS------LDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 97 ~~h~~~-V~~lafsp--dg~~Lasgs------~DG~I~IWDl~t~~~l~~~~~ 140 (845)
...... -..+.-+| .+..++++. .+|.|..+|.++|+.+..+..
T Consensus 147 ~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~ 199 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYT 199 (527)
T ss_pred ccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccC
Confidence 531110 00111122 123455543 268999999999999887653
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.022 Score=69.58 Aligned_cols=140 Identities=16% Similarity=0.225 Sum_probs=98.4
Q ss_pred CCCEEEEE-eCCCeEEEEECCCCeeEEEecCCCCC-eEEEEEcC-----CCCEEEEEECCCcEEEEECCCC--cEEEE-E
Q psy467 27 SGQVLATG-GDDKKVNLWALGKSNCIMSLSGHSTP-VESVQFGN-----GEETLSAGCQSGSIKIWNLAVP--TVQRT-L 96 (845)
Q Consensus 27 dg~~LaTg-s~DG~I~IWdl~t~~~i~~l~~h~~~-V~sLafSp-----dg~~LaSgs~DGtV~VWDl~tg--~~v~~-l 96 (845)
+.++|+.. .....|+-.|++.|+.+..+..|... |..++-.. +....+.|-.++.+..||.+-. +++.. .
T Consensus 492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~ 571 (794)
T PF08553_consen 492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQS 571 (794)
T ss_pred ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccc
Confidence 33444443 34568889999999999999887654 55554321 1334566778999999999753 23321 1
Q ss_pred --cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 97 --NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 97 --~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
-......+|++-+.+| +||+|+.+|.|++||--..+....+.+...+|.+|+.+.||+|+++.+.. .+.+
T Consensus 572 k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t-yLlL 643 (794)
T PF08553_consen 572 KQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKT-YLLL 643 (794)
T ss_pred cccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecc-eEEE
Confidence 1234567888888777 89999999999999954333344455678899999999999998887765 4555
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.19 Score=60.49 Aligned_cols=143 Identities=14% Similarity=0.085 Sum_probs=82.4
Q ss_pred CCCeEEEEEcCCCCEEEEEE------CCC--cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC--------
Q psy467 58 STPVESVQFGNGEETLSAGC------QSG--SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD-------- 121 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs------~DG--tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D-------- 121 (845)
...+...+++|+|+.++... .|+ .|.+++.. +.......+ ...+.-.|+|||+.+++....
T Consensus 349 ~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~ 425 (591)
T PRK13616 349 MGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIR 425 (591)
T ss_pred ccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-CcceeeecC--CCCCCceECCCCCceEEEecCcceEEEec
Confidence 34678999999999987765 244 45555542 222222232 237888999998877776432
Q ss_pred ----CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCC
Q psy467 122 ----SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY 197 (845)
Q Consensus 122 ----G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~ 197 (845)
+.+.+.++..+.... ...+.|..+.|||||..++... +|.|.+........+...+ .....+..-....
T Consensus 426 ~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l---~~~~~l~~~l~~~ 498 (591)
T PRK13616 426 DPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYAL---TNPREVGPGLGDT 498 (591)
T ss_pred cCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceee---cccEEeecccCCc
Confidence 233333444333222 2356799999999999988766 4777773333333332222 1111111111223
Q ss_pred CcceeecCCCCeE
Q psy467 198 TSSVPFSHNTSLR 210 (845)
Q Consensus 198 i~svs~spdg~~l 210 (845)
..++.|..++.++
T Consensus 499 ~~~l~W~~~~~L~ 511 (591)
T PRK13616 499 AVSLDWRTGDSLV 511 (591)
T ss_pred cccceEecCCEEE
Confidence 4678888888855
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.26 Score=55.45 Aligned_cols=268 Identities=11% Similarity=0.023 Sum_probs=116.9
Q ss_pred ECCCCeeEEEecCCCCCeEEE-----EEcCCCCEEEEEEC-C--CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE
Q psy467 44 ALGKSNCIMSLSGHSTPVESV-----QFGNGEETLSAGCQ-S--GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115 (845)
Q Consensus 44 dl~t~~~i~~l~~h~~~V~sL-----afSpdg~~LaSgs~-D--GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L 115 (845)
|..+|..+.++.........+ +|.+||+.|+.++. + ..+.+.|+.+++..+.-.+.........++++++.+
T Consensus 16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~ 95 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRAL 95 (386)
T ss_dssp -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEE
T ss_pred CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeE
Confidence 567777777776544433333 56778987766655 4 457777899887655444322223356677888888
Q ss_pred EEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEe--cCCCEEEEEeCCCcEEE----eeee-----ccCCceeEEEEC
Q psy467 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS--PDGQWIASGGEDGVVRI----GASF-----HLTNTSIHVVDL 184 (845)
Q Consensus 116 asgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafS--Pdg~~Lasgs~DG~I~I----~~~~-----~~~~~~I~vWDl 184 (845)
+-...+..|.-.|+.+.+....+.....-+-...|. .|+..++-.-....-.. |..| ......|...|+
T Consensus 96 ~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl 175 (386)
T PF14583_consen 96 YYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDL 175 (386)
T ss_dssp EEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEET
T ss_pred EEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEEC
Confidence 766667789999999987665565555555445664 34555433211110000 1111 223456667788
Q ss_pred CCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCC
Q psy467 185 SLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHR 263 (845)
Q Consensus 185 ~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg 263 (845)
.+|+.-..+. ..+...+.++|..-.+..+.. .++.....-.||-+.........-
T Consensus 176 ~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCH-EGpw~~Vd~RiW~i~~dg~~~~~v----------------------- 231 (386)
T PF14583_consen 176 KTGERKVVFEDTDWLGHVQFSPTDPTLIMFCH-EGPWDLVDQRIWTINTDGSNVKKV----------------------- 231 (386)
T ss_dssp TT--EEEEEEESS-EEEEEEETTEEEEEEEEE--S-TTTSS-SEEEEETTS---EES-----------------------
T ss_pred CCCceeEEEecCccccCcccCCCCCCEEEEec-cCCcceeceEEEEEEcCCCcceee-----------------------
Confidence 8877633322 556677778876655555432 222111111133222111100000
Q ss_pred CcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC
Q psy467 264 SLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343 (845)
Q Consensus 264 ~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D 343 (845)
........+..=-|.|||..+.+.....++.+..|.-+|+.+++....... .+...+.-++||++++--+.|
T Consensus 232 ------~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~--p~~~H~~ss~Dg~L~vGDG~d 303 (386)
T PF14583_consen 232 ------HRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEM--PWCSHFMSSPDGKLFVGDGGD 303 (386)
T ss_dssp ------S---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE---SEEEEEE-TTSSEEEEEE--
T ss_pred ------ecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeC--CceeeeEEcCCCCEEEecCCC
Confidence 000001223344567777643211111122344677788888765433222 246677778999988754443
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0059 Score=42.44 Aligned_cols=39 Identities=33% Similarity=0.717 Sum_probs=34.5
Q ss_pred CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 48 SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 48 ~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
++.+..+..|...|.++.|++++..+++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 355667778899999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.66 Score=57.37 Aligned_cols=111 Identities=9% Similarity=0.141 Sum_probs=75.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCC--------eEEEEEcC----------------CCCEEEEEECCCcEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP--------VESVQFGN----------------GEETLSAGCQSGSIK 83 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~--------V~sLafSp----------------dg~~LaSgs~DGtV~ 83 (845)
+..|++++.++.|.-.|..+|+.+.++...... ...+++.. .+..|+.++.|+.|.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 456777788889999999999998887643211 12233321 344788888999999
Q ss_pred EEECCCCcEEEEEcCCCCCeE-------------EEEEcc--CCCEEEEEEC----------CCeEEEEECCCCceEEEE
Q psy467 84 IWNLAVPTVQRTLNGHKSSIT-------------SVDFHP--YGDYLCSGSL----------DSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~-------------~lafsp--dg~~Lasgs~----------DG~I~IWDl~t~~~l~~~ 138 (845)
-.|.++|+.+..+.. .+.|. .+.-.| .+..+++|+. +|.|+-+|+++|+.+..+
T Consensus 274 ALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 274 ALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 999999999987742 22221 111112 2345666643 688999999999999887
Q ss_pred c
Q psy467 139 R 139 (845)
Q Consensus 139 ~ 139 (845)
.
T Consensus 353 ~ 353 (764)
T TIGR03074 353 D 353 (764)
T ss_pred e
Confidence 6
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.76 Score=50.87 Aligned_cols=125 Identities=15% Similarity=0.165 Sum_probs=77.2
Q ss_pred eEEEEECCCCeeEEEecC-CCCCeEEEE---EcCC----CCEEEEEEC----------CCcEEEEECCCC----cEEEEE
Q psy467 39 KVNLWALGKSNCIMSLSG-HSTPVESVQ---FGNG----EETLSAGCQ----------SGSIKIWNLAVP----TVQRTL 96 (845)
Q Consensus 39 ~I~IWdl~t~~~i~~l~~-h~~~V~sLa---fSpd----g~~LaSgs~----------DGtV~VWDl~tg----~~v~~l 96 (845)
.|++.|..+.+.+.++.- ....+.+++ +..+ ..+|++|+. .|.|.++++... ..+..+
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i 82 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI 82 (321)
T ss_dssp EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence 578888877777655532 233444443 3332 467887753 288999999884 122222
Q ss_pred --cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc-eEEEEc-CCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 97 --NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG-CIYTYR-GHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 97 --~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~-~l~~~~-~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
....++|++++-. +.+|+++. ++.|.+|++...+ ....-. .....+.++... ++++++|+....+.+
T Consensus 83 ~~~~~~g~V~ai~~~--~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~ 153 (321)
T PF03178_consen 83 HSTEVKGPVTAICSF--NGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSL 153 (321)
T ss_dssp EEEEESS-EEEEEEE--TTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEE
T ss_pred EEEeecCcceEhhhh--CCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEE
Confidence 2256789888766 33455544 5789999998776 433222 223356666555 679999998888887
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.056 Score=66.11 Aligned_cols=57 Identities=11% Similarity=0.062 Sum_probs=46.2
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEe
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl 350 (845)
+||+|+.+|.|++||--.......+.+-..+|.+|..+.||+||++.+...+.|++.
T Consensus 590 ~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t 646 (794)
T PF08553_consen 590 YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDT 646 (794)
T ss_pred eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEE
Confidence 699999999999999543333344556688999999999999999888877777775
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.41 E-value=1 Score=49.68 Aligned_cols=97 Identities=8% Similarity=0.124 Sum_probs=65.8
Q ss_pred eeEEEcCCCCcccceEEEEEeCCCeEEEEECCC--C----eE-EEEecCCCCCEEEEEEeCCCCEEEEEeCCC--EEEEE
Q psy467 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEK--F----SL-VSTTEKNSSTIRRLTFSEGGECLLGGDTEG--LKVYG 349 (845)
Q Consensus 279 ~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s--~----~~-l~tl~gh~~~VtslafSpdG~~Lasgs~DG--I~IWD 349 (845)
+.++||||++. ++++=+..+.|+-|++.. + +. ...+....+..-.++...+|.+-+++..+| |.+|+
T Consensus 166 NGla~SpDg~t----ly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~ 241 (307)
T COG3386 166 NGLAFSPDGKT----LYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN 241 (307)
T ss_pred CceEECCCCCE----EEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence 45677777762 455555568888887752 1 11 122222345666788888888776555554 99999
Q ss_pred ecCCceEEEecCCCCCeEEEEEc--CCceEEEE
Q psy467 350 WEPARQYDAQPMGWGKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 350 l~tgk~l~tl~~h~~~VtsVafS--dg~lLaaS 380 (845)
.+ |+++..+......+++++|- +.+.|.++
T Consensus 242 pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iT 273 (307)
T COG3386 242 PD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYIT 273 (307)
T ss_pred CC-CcEEEEEECCCCCCccceEeCCCcCEEEEE
Confidence 88 99999998888999999999 44555444
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.009 Score=41.45 Aligned_cols=39 Identities=51% Similarity=0.836 Sum_probs=34.0
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEE
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWD 128 (845)
++....+..|...|.++.|++++..+++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345666777888999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=96.31 E-value=4.5 Score=50.05 Aligned_cols=151 Identities=13% Similarity=0.054 Sum_probs=85.2
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec--CCCCCeEEEEEcCCC------CEEEEEECCCcEEEEEC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS--GHSTPVESVQFGNGE------ETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~--~h~~~V~sLafSpdg------~~LaSgs~DGtV~VWDl 87 (845)
+.+++.+.+. +...++.++.++.+...++..+. ++... .....|.|+.++|-| ++++.|.++..+.+.-.
T Consensus 488 ~~~ti~~~~~-n~sqVvvA~~~~~l~y~~i~~~~-l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~ 565 (1096)
T KOG1897|consen 488 GKITIGVVSA-NASQVVVAGGGLALFYLEIEDGG-LREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTF 565 (1096)
T ss_pred CceEEEEEee-cceEEEEecCccEEEEEEeeccc-eeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEE
Confidence 4455555555 55567777777777777776555 22222 235689999999732 27888888766655433
Q ss_pred -CCCcEEEEE--cC--CCCCeEEEEEccCCCEEEEEECCCeEEEEEC--CCCceEEEE--cCCCCCeEEEEEecCCCEEE
Q psy467 88 -AVPTVQRTL--NG--HKSSITSVDFHPYGDYLCSGSLDSFIKLWDL--RRKGCIYTY--RGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 88 -~tg~~v~~l--~~--h~~~V~~lafspdg~~Lasgs~DG~I~IWDl--~t~~~l~~~--~~h~~~V~sLafSPdg~~La 158 (845)
.+...+... .+ -...|....|-.|..+|.++..||.+.-+.+ .++..-..- .-...++.--.|+..++.-+
T Consensus 566 ~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~v 645 (1096)
T KOG1897|consen 566 LPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAV 645 (1096)
T ss_pred CCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEE
Confidence 333333222 11 1234555566667889999999999876644 444322111 12344555556665554434
Q ss_pred EEeCCCcEEE
Q psy467 159 SGGEDGVVRI 168 (845)
Q Consensus 159 sgs~DG~I~I 168 (845)
.+..|.-..+
T Consensus 646 fa~sdrP~vi 655 (1096)
T KOG1897|consen 646 FALSDRPTVI 655 (1096)
T ss_pred EEeCCCCEEE
Confidence 4444444444
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.26 Score=45.75 Aligned_cols=101 Identities=14% Similarity=0.233 Sum_probs=72.7
Q ss_pred eEEEEEcC---CC-CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEE
Q psy467 61 VESVQFGN---GE-ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIY 136 (845)
Q Consensus 61 V~sLafSp---dg-~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~ 136 (845)
|++|++.. || +.|++|+.|..|++|+-+ ..+..+. ....|++++-... ..|+.+..+|+|-+|+- ...+.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~RlW 75 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRLW 75 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeC--cceee
Confidence 66777654 22 589999999999999865 5677776 4556788877665 57999999999999985 34566
Q ss_pred EEcCCCCCeEEEEEec---CC-CEEEEEeCCCcEEE
Q psy467 137 TYRGHSKSINSIRFSP---DG-QWIASGGEDGVVRI 168 (845)
Q Consensus 137 ~~~~h~~~V~sLafSP---dg-~~Lasgs~DG~I~I 168 (845)
..+... .+.++++.. || .-|++|-.+|.|-+
T Consensus 76 RiKSK~-~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 76 RIKSKN-QVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred eeccCC-CeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 666433 466766654 23 25888888887754
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.78 Score=50.85 Aligned_cols=111 Identities=15% Similarity=0.145 Sum_probs=68.2
Q ss_pred EEEEEecCCCCEEEEEe--CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC-CCcEEEE
Q psy467 19 NCLALGKKSGQVLATGG--DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA-VPTVQRT 95 (845)
Q Consensus 19 ~~LafSp~dg~~LaTgs--~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~-tg~~v~~ 95 (845)
..++++. +++++++.. --..|.|-|+..++.+..+.- .+ +..+-=+. ..-+.+-|.||.+.-..++ .|+...+
T Consensus 98 ~~~~ls~-dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~-PG-C~~iyP~~-~~~F~~lC~DGsl~~v~Ld~~Gk~~~~ 173 (342)
T PF06433_consen 98 NMFALSA-DGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT-PG-CWLIYPSG-NRGFSMLCGDGSLLTVTLDADGKEAQK 173 (342)
T ss_dssp GGEEE-T-TSSEEEEEEESSSEEEEEEETTTTEEEEEEEG-TS-EEEEEEEE-TTEEEEEETTSCEEEEEETSTSSEEEE
T ss_pred cceEEcc-CCcEEEEEccCCCCeEEEEECCCCceeeeecC-CC-EEEEEecC-CCceEEEecCCceEEEEECCCCCEeEe
Confidence 3456777 777777754 334788889988888887762 22 22222222 2457788899999999988 4554422
Q ss_pred E----cCCCCCe-EEEEEccCCCEEEEEECCCeEEEEECCCCc
Q psy467 96 L----NGHKSSI-TSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133 (845)
Q Consensus 96 l----~~h~~~V-~~lafspdg~~Lasgs~DG~I~IWDl~t~~ 133 (845)
. .....++ ..-++...+..++-.+.+|.|+-.|+....
T Consensus 174 ~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~ 216 (342)
T PF06433_consen 174 STKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDS 216 (342)
T ss_dssp EEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSS
T ss_pred eccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCc
Confidence 2 1222222 233455556666668889999999987554
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=96.21 E-value=5 Score=49.64 Aligned_cols=323 Identities=13% Similarity=0.122 Sum_probs=162.6
Q ss_pred CCcEEEEEEecC--CCC---EEEEEeCCCeEEEE-ECCCCeeEEEe--cC--CCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 15 GASVNCLALGKK--SGQ---VLATGGDDKKVNLW-ALGKSNCIMSL--SG--HSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 15 ~~~V~~LafSp~--dg~---~LaTgs~DG~I~IW-dl~t~~~i~~l--~~--h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
...|.|+.++|. +.+ ++|+|..+..+.+. -..+...+... .+ -...|.-.+|-.|..+|.++..||.+.-
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~ 609 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLY 609 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEE
Confidence 468999999973 223 88888776654433 33333333222 11 1234555566667889999999999887
Q ss_pred EECC--CCcEE--EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEE-EEecC--CCEE
Q psy467 85 WNLA--VPTVQ--RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI-RFSPD--GQWI 157 (845)
Q Consensus 85 WDl~--tg~~v--~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sL-afSPd--g~~L 157 (845)
+.++ ++..- +...-...++.--.|+..++.-+.+..|.-..+|.-+ ++.+.+--.- ..+..+ .|+.+ +..+
T Consensus 610 fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n-~kLv~spls~-kev~~~c~f~s~a~~d~l 687 (1096)
T KOG1897|consen 610 FVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSN-GKLVYSPLSL-KEVNHMCPFNSDAYPDSL 687 (1096)
T ss_pred EEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecC-CcEEEeccch-HHhhhhcccccccCCceE
Confidence 6554 44322 1112244566666777665544444556656666644 3333321111 111111 22221 2334
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCcc---CCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP---LGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~---l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
+.+.. +.+.+ .-+..-+. ...+-....+.+++.+.............. ..
T Consensus 688 ~~~~~-~~l~i-------------~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~-------------~~ 740 (1096)
T KOG1897|consen 688 ASANG-GALTI-------------GTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIES-------------SA 740 (1096)
T ss_pred EEecC-CceEE-------------EEecchhhcceeeecCCCChhheEecccceEEEEEeccccc-------------ch
Confidence 44433 45555 22222111 111113445556665544333333221111 00
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe----------CCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS----------ADRTV 304 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs----------~DG~I 304 (845)
...........+....+..-..++.+.... ......+.+..|..|.+. ++++|. ..|.|
T Consensus 741 ~~~~ee~~~s~l~vlD~nTf~vl~~hef~~-------~E~~~Si~s~~~~~d~~t----~~vVGT~~v~Pde~ep~~GRI 809 (1096)
T KOG1897|consen 741 EYYGEEYEVSFLRVLDQNTFEVLSSHEFER-------NETALSIISCKFTDDPNT----YYVVGTGLVYPDENEPVNGRI 809 (1096)
T ss_pred hhcCCcceEEEEEEecCCceeEEeeccccc-------cceeeeeeeeeecCCCce----EEEEEEEeeccCCCCcccceE
Confidence 000000000011111111112222222221 122334556667777332 666664 24788
Q ss_pred EEEECCCCeEEEEecCC--CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 305 NFWDLEKFSLVSTTEKN--SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh--~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.+|....+..+.....+ .+.+.++.-- +|++||.- +. |++|+|.+.+.++.-..|..++..+... .|..|+++
T Consensus 810 ivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA~I--n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~Vg 886 (1096)
T KOG1897|consen 810 IVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLAGI--NQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVG 886 (1096)
T ss_pred EEEEEecCCceeeeeeeeeccceeehhhh-CCeEEEec--CcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEe
Confidence 88887764433333322 3455555432 56666543 34 9999999998888777888999999998 88889888
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.097 Score=62.86 Aligned_cols=144 Identities=12% Similarity=0.122 Sum_probs=85.9
Q ss_pred CcEEEEEEecCCCCEEEEEe------CCC--eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC--------
Q psy467 16 ASVNCLALGKKSGQVLATGG------DDK--KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS-------- 79 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs------~DG--~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D-------- 79 (845)
..+.+.+++| +|+.+|... .|+ .|.+++.. +.. ..+.. ......-.|+|+|..|++....
T Consensus 350 ~~vsspaiSp-dG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~ 425 (591)
T PRK13616 350 GNITSAALSR-SGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIR 425 (591)
T ss_pred cCcccceECC-CCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeec-CCCCCCceECCCCCceEEEecCcceEEEec
Confidence 4678999999 888777654 244 45555542 222 33321 2247888999999888777533
Q ss_pred ----CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEE---EECCCCce-E---EEEc-CCCCCeEE
Q psy467 80 ----GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL---WDLRRKGC-I---YTYR-GHSKSINS 147 (845)
Q Consensus 80 ----GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~I---WDl~t~~~-l---~~~~-~h~~~V~s 147 (845)
+.+.+.+++.+.... ...+.|..+.|+|||..++... +|.|.+ -....|.. + ..+. .....+.+
T Consensus 426 ~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~ 501 (591)
T PRK13616 426 DPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVS 501 (591)
T ss_pred cCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCcccc
Confidence 233333444333222 2356799999999999887765 477777 33334431 1 1122 22334688
Q ss_pred EEEecCCCEEEEEeCCCcEEE
Q psy467 148 IRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I 168 (845)
+.|..++.++ ++..++...+
T Consensus 502 l~W~~~~~L~-V~~~~~~~~v 521 (591)
T PRK13616 502 LDWRTGDSLV-VGRSDPEHPV 521 (591)
T ss_pred ceEecCCEEE-EEecCCCCce
Confidence 9999988754 5555554445
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.22 Score=56.95 Aligned_cols=192 Identities=17% Similarity=0.121 Sum_probs=108.7
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEe--cC------CCCCeEEEEEcC-----CC--
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL--SG------HSTPVESVQFGN-----GE-- 70 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l--~~------h~~~V~sLafSp-----dg-- 70 (845)
....-+....+.|++++.| +=-++|.|..+|.+.|.|+.....+..- .. ....|+++.|+- |+
T Consensus 77 ~P~~l~~~~~g~vtal~~S--~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~yS 154 (395)
T PF08596_consen 77 LPLTLLDAKQGPVTALKNS--DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYS 154 (395)
T ss_dssp EEEEEE---S-SEEEEEE---BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSE
T ss_pred CchhheeccCCcEeEEecC--CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCccc
Confidence 3445566778999999997 4568999999999999999888777652 22 345788999973 32
Q ss_pred -CEEEEEECCCcEEEEECC--C-CcEE----EEEcCCCCCeEEEE-EccC-----------------C---CEEEEEECC
Q psy467 71 -ETLSAGCQSGSIKIWNLA--V-PTVQ----RTLNGHKSSITSVD-FHPY-----------------G---DYLCSGSLD 121 (845)
Q Consensus 71 -~~LaSgs~DGtV~VWDl~--t-g~~v----~~l~~h~~~V~~la-fspd-----------------g---~~Lasgs~D 121 (845)
-.|++|+..|.+.+|.+. . +... .....+.++|..|. ++.+ + +.+++...+
T Consensus 155 Si~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe 234 (395)
T PF08596_consen 155 SICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSE 234 (395)
T ss_dssp EEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-S
T ss_pred ceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcc
Confidence 368889999999999874 1 2211 22224556665554 3221 1 124444557
Q ss_pred CeEEEEECCCCceEEEEcCCCCCeEEEEEe-----cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC--
Q psy467 122 SFIKLWDLRRKGCIYTYRGHSKSINSIRFS-----PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-- 194 (845)
Q Consensus 122 G~I~IWDl~t~~~l~~~~~h~~~V~sLafS-----Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-- 194 (845)
..++++...+.+..++..........+.+- ..+..|++-..+|.+++ |.+..-+.+....
T Consensus 235 ~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i-------------~SLP~Lkei~~~~l~ 301 (395)
T PF08596_consen 235 SDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRI-------------YSLPSLKEIKSVSLP 301 (395)
T ss_dssp SEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEE-------------EETTT--EEEEEE-S
T ss_pred cceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEE-------------EECCCchHhhcccCC
Confidence 789999998777766655222233344452 24667888889999999 8887766543322
Q ss_pred ----CCCCcceeecCCCCeEEE
Q psy467 195 ----PQYTSSVPFSHNTSLRKS 212 (845)
Q Consensus 195 ----~~~i~svs~spdg~~l~~ 212 (845)
........++++|..+..
T Consensus 302 ~~~d~~~~~~ssis~~Gdi~~~ 323 (395)
T PF08596_consen 302 PPLDSRRLSSSSISRNGDIFYW 323 (395)
T ss_dssp S---HHHHTT-EE-TTS-EEEE
T ss_pred CccccccccccEECCCCCEEEE
Confidence 223456777888885543
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.95 Score=56.00 Aligned_cols=70 Identities=9% Similarity=0.034 Sum_probs=52.0
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC--------eEEEEEcc----------------CCCEEEEEECCCeEE
Q psy467 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS--------ITSVDFHP----------------YGDYLCSGSLDSFIK 125 (845)
Q Consensus 70 g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~--------V~~lafsp----------------dg~~Lasgs~DG~I~ 125 (845)
+..|+.++.++.|.-.|..+|+.+.++...... +..+++.. ++..++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 567777888899999999999999887632211 12233321 345788899999999
Q ss_pred EEECCCCceEEEEc
Q psy467 126 LWDLRRKGCIYTYR 139 (845)
Q Consensus 126 IWDl~t~~~l~~~~ 139 (845)
-.|.++|+.+..+.
T Consensus 274 ALDA~TGk~~W~fg 287 (764)
T TIGR03074 274 ALDADTGKLCEDFG 287 (764)
T ss_pred EEECCCCCEEEEec
Confidence 99999999998774
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.047 Score=66.84 Aligned_cols=97 Identities=15% Similarity=0.277 Sum_probs=73.7
Q ss_pred CCCEEEEEECCCcEEEEECCCCc-EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPT-VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~-~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~s 147 (845)
.+..++.|+..|.|...|+...- +...=....++|++++|+.+|..++.|-.+|.|.+||+..++.++.+..+..+..+
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 45678899999999998887531 11111234578999999999999999999999999999999999888777666555
Q ss_pred E---EEecCCCEEEEEeCCCc
Q psy467 148 I---RFSPDGQWIASGGEDGV 165 (845)
Q Consensus 148 L---afSPdg~~Lasgs~DG~ 165 (845)
+ .+..++..++++...|.
T Consensus 178 vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCc
Confidence 4 34445556778777775
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.082 Score=60.46 Aligned_cols=136 Identities=17% Similarity=0.287 Sum_probs=97.2
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCC--E-----EEEEECCCcEEEEECCCCc--EEEEEcCC-
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE--T-----LSAGCQSGSIKIWNLAVPT--VQRTLNGH- 99 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~--~-----LaSgs~DGtV~VWDl~tg~--~v~~l~~h- 99 (845)
+|.++.....++--|++.|+.+..+.-|.. |.-+.+.|+.+ . -+.|-.++.|.-||.+-.. .+...++|
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kq 426 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQ 426 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccc
Confidence 344455566788889999999999987776 88888888643 2 2346678899999987432 22222222
Q ss_pred ---CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 100 ---KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 100 ---~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.....|++-..+| ++++|+.+|.|++||--.......+.+...+|..+..+.||++|++.+.. .+.+
T Consensus 427 y~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~t-yLlL 496 (644)
T KOG2395|consen 427 YSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKT-YLLL 496 (644)
T ss_pred cccccccceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEeccc-EEEE
Confidence 3346677766666 89999999999999974334445567788899999999999998877654 4555
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.96 E-value=3 Score=44.88 Aligned_cols=151 Identities=12% Similarity=0.172 Sum_probs=97.2
Q ss_pred CeEEEEEcCCC-CEEEEEECCCc-EEEEECCCCcEEEEEcCCCCC--eEEEEEccCCCEEEEEECC-----CeEEEEECC
Q psy467 60 PVESVQFGNGE-ETLSAGCQSGS-IKIWNLAVPTVQRTLNGHKSS--ITSVDFHPYGDYLCSGSLD-----SFIKLWDLR 130 (845)
Q Consensus 60 ~V~sLafSpdg-~~LaSgs~DGt-V~VWDl~tg~~v~~l~~h~~~--V~~lafspdg~~Lasgs~D-----G~I~IWDl~ 130 (845)
.-..|+|+|.. .-++.+-.-|+ ..++|....+...++...++. --.=.|||||.+|+..-.| |.|-|||.+
T Consensus 69 R~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r 148 (366)
T COG3490 69 RGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR 148 (366)
T ss_pred ccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence 44567788844 34555555555 568898887766655432221 1123699999999876544 789999997
Q ss_pred CC-ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe-------eeeccCCceeEEEECCCCccCCCCC------CC
Q psy467 131 RK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG-------ASFHLTNTSIHVVDLSLVHPLGTPP------PQ 196 (845)
Q Consensus 131 t~-~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~-------~~~~~~~~~I~vWDl~tg~~l~~~~------~~ 196 (845)
.+ +.+..+..|.-....+.|.+||+.++.+. |-|..- -..+.....+.+.|..+|..+.... ..
T Consensus 149 ~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~l 226 (366)
T COG3490 149 EGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQL 226 (366)
T ss_pred cccceecccccCCcCcceeEEecCCcEEEEeC--CceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhc
Confidence 53 44566777877888999999999988764 334431 0123344456667877887765432 33
Q ss_pred CCcceeecCCCCeEEE
Q psy467 197 YTSSVPFSHNTSLRKS 212 (845)
Q Consensus 197 ~i~svs~spdg~~l~~ 212 (845)
.++.+...+||....-
T Consensus 227 SiRHld~g~dgtvwfg 242 (366)
T COG3490 227 SIRHLDIGRDGTVWFG 242 (366)
T ss_pred ceeeeeeCCCCcEEEE
Confidence 4667777777775543
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=95.91 E-value=1.9 Score=46.31 Aligned_cols=63 Identities=24% Similarity=0.324 Sum_probs=44.8
Q ss_pred CCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc
Q psy467 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133 (845)
Q Consensus 68 pdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~ 133 (845)
..++.|+.|+.+| |.++++........+. +...|..+...++-+.|++-+ |+.+.++++..-.
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~ 67 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLE 67 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhc
Confidence 3578899998888 9999994333233332 233499999999877776665 5999999986543
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=95.84 E-value=2.8 Score=48.23 Aligned_cols=89 Identities=17% Similarity=0.277 Sum_probs=59.7
Q ss_pred EEEEecCCCCEEEEEeCCCeEEE---EECC-----CCeeEEEecC---CC--CCeEEEEEcC-----------CCCEEEE
Q psy467 20 CLALGKKSGQVLATGGDDKKVNL---WALG-----KSNCIMSLSG---HS--TPVESVQFGN-----------GEETLSA 75 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~I---Wdl~-----t~~~i~~l~~---h~--~~V~sLafSp-----------dg~~LaS 75 (845)
+++.+| ++++||.+..+..+.+ |+.. .+.......+ +. ..|+++.|-| |...++.
T Consensus 6 ~isls~-~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~V 84 (415)
T PF14655_consen 6 SISLSP-DGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAV 84 (415)
T ss_pred eEEecC-CCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEE
Confidence 467888 9999999988776655 6431 1222222221 21 4677776643 4578999
Q ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP 110 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp 110 (845)
|..+|.|++|.. +|..+..-.-|..+|..+.+..
T Consensus 85 G~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~~ 118 (415)
T PF14655_consen 85 GTSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCRS 118 (415)
T ss_pred EecccEEEEEec-cchHHHHHhcCccceEEEEecc
Confidence 999999999997 4666655555788888887754
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=95.62 E-value=1.8 Score=45.28 Aligned_cols=47 Identities=15% Similarity=0.045 Sum_probs=37.9
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeC-CCCEEEEE
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE-GGECLLGG 340 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp-dG~~Lasg 340 (845)
+.++.-+.++|...|..+|+.+.++.-....|+++||-- +-..+++.
T Consensus 225 L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGkn~d~~yvT 272 (310)
T KOG4499|consen 225 LYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGKNLDILYVT 272 (310)
T ss_pred EEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCCCccEEEEE
Confidence 778888889999999999999999987788899999953 33344433
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=95.62 E-value=4.1 Score=43.84 Aligned_cols=123 Identities=9% Similarity=0.029 Sum_probs=78.0
Q ss_pred eEEEecC-CCCCeEEEEEcCCCCEEEEEECCC--cEEEEECCCCcEEEEEcCC-CCCeEEEEEccCCCEEEEEECCCeEE
Q psy467 50 CIMSLSG-HSTPVESVQFGNGEETLSAGCQSG--SIKIWNLAVPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLDSFIK 125 (845)
Q Consensus 50 ~i~~l~~-h~~~V~sLafSpdg~~LaSgs~DG--tV~VWDl~tg~~v~~l~~h-~~~V~~lafspdg~~Lasgs~DG~I~ 125 (845)
.+.++.. ...-...+.|..++.++-+.+.-| .|+.+|+.+++......-. .---..++... ++...-.=.++...
T Consensus 35 vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d~l~qLTWk~~~~f 113 (264)
T PF05096_consen 35 VVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-DKLYQLTWKEGTGF 113 (264)
T ss_dssp EEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-TEEEEEESSSSEEE
T ss_pred EEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-CEEEEEEecCCeEE
Confidence 4445442 234567888877888777777765 6999999999877665422 22233455542 23334445678999
Q ss_pred EEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 126 IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
+||..+.+.+.++. ..+.=+.++ .|++.|+.......+++ +|..+.+.
T Consensus 114 ~yd~~tl~~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~-------------~dP~~f~~ 161 (264)
T PF05096_consen 114 VYDPNTLKKIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYF-------------LDPETFKE 161 (264)
T ss_dssp EEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEE-------------E-TTT-SE
T ss_pred EEccccceEEEEEe-cCCcceEEE--cCCCEEEEECCccceEE-------------ECCcccce
Confidence 99999999888886 345667777 45777777766778888 88877665
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.18 Score=57.79 Aligned_cols=57 Identities=11% Similarity=0.091 Sum_probs=45.8
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEe
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl 350 (845)
++|+|+.+|.|++||--...-...+.+-..+|..+..+.||++|++.+...+.+.++
T Consensus 443 ~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~t 499 (644)
T KOG2395|consen 443 YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLLLIDT 499 (644)
T ss_pred eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecccEEEEEEE
Confidence 799999999999999733333445667788999999999999998887776656554
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.59 E-value=2 Score=46.45 Aligned_cols=196 Identities=9% Similarity=0.131 Sum_probs=118.4
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC-CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG-HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t 89 (845)
+.|-.+.|.+++|+| +.+.|++......-.||=..+|+.+.++.- .-..-..|.+..++.+.++--.++.+.++.+..
T Consensus 81 i~g~~~nvS~LTynp-~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~ 159 (316)
T COG3204 81 ILGETANVSSLTYNP-DTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDA 159 (316)
T ss_pred cccccccccceeeCC-CcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcC
Confidence 556667799999999 555555555556666777678888887642 123456788888888888877789999988876
Q ss_pred CcEEEEEc---------CC-CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc-e--EEEEcCC-------CCCeEEEE
Q psy467 90 PTVQRTLN---------GH-KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG-C--IYTYRGH-------SKSINSIR 149 (845)
Q Consensus 90 g~~v~~l~---------~h-~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~-~--l~~~~~h-------~~~V~sLa 149 (845)
+..+..+. .+ +.....++|.|.+..|+.+-+..-+.||.+.... . ......+ -..|.++.
T Consensus 160 ~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~ 239 (316)
T COG3204 160 DTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLE 239 (316)
T ss_pred CccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccce
Confidence 53332221 12 4567889999999888888887777777765322 1 1111111 12467788
Q ss_pred EecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeE
Q psy467 150 FSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR 210 (845)
Q Consensus 150 fSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l 210 (845)
|++. +.+++.+.+++.+.- +......+....+..|..--.....+.-.++..++|.+.
T Consensus 240 ~~~~~~~LLVLS~ESr~l~E---vd~~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lY 298 (316)
T COG3204 240 FNAITNSLLVLSDESRRLLE---VDLSGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLY 298 (316)
T ss_pred ecCCCCcEEEEecCCceEEE---EecCCCeeeeEEeccCCCCCcccCCCcceeEECCCCCEE
Confidence 8874 445555555555544 222222233344433332111123444566666666543
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=95.53 E-value=3.1 Score=47.85 Aligned_cols=89 Identities=13% Similarity=0.247 Sum_probs=59.7
Q ss_pred EEEEcCCCCEEEEEECCCcEEE---EECC-----CCcEEEEEcC---CC--CCeEEEEEcc-----------CCCEEEEE
Q psy467 63 SVQFGNGEETLSAGCQSGSIKI---WNLA-----VPTVQRTLNG---HK--SSITSVDFHP-----------YGDYLCSG 118 (845)
Q Consensus 63 sLafSpdg~~LaSgs~DGtV~V---WDl~-----tg~~v~~l~~---h~--~~V~~lafsp-----------dg~~Lasg 118 (845)
.++.+|+++.||.+..+..+.+ |+.. .+.......+ +. ..|+++.|-| |...+++|
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG 85 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG 85 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence 4678899999999977666555 5431 1122222211 11 4577666544 35689999
Q ss_pred ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 119 s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
..+|.|++|.. +|..+..-.-|..+|..+.+..
T Consensus 86 ~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~~ 118 (415)
T PF14655_consen 86 TSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCRS 118 (415)
T ss_pred ecccEEEEEec-cchHHHHHhcCccceEEEEecc
Confidence 99999999996 5777666666888999888754
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.016 Score=69.25 Aligned_cols=124 Identities=15% Similarity=0.204 Sum_probs=82.5
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC--CCee-----EEEecCCCCCeEEEEEcC---CCCEEEEEECCC
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG--KSNC-----IMSLSGHSTPVESVQFGN---GEETLSAGCQSG 80 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~--t~~~-----i~~l~~h~~~V~sLafSp---dg~~LaSgs~DG 80 (845)
++|..+.|-.++|-..+-..++ -.-|.+.||+++ .|+. ++........+.-+.|.| +.-++..+-.++
T Consensus 128 ~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~ 205 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGG 205 (1283)
T ss_pred HhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCC
Confidence 4677888888888553322232 334678899874 3332 233333455566677766 567788888889
Q ss_pred cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
.|++.++..... ..+.+|...+..++|...|-.++.+ .||||+.++.+
T Consensus 206 ~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~-------------------------------lSpDGtv~a~a 253 (1283)
T KOG1916|consen 206 EIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLAS-------------------------------LSPDGTVFAWA 253 (1283)
T ss_pred ceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhhee-------------------------------eCCCCcEEEEe
Confidence 999888765433 4455688888888877655222221 78999999999
Q ss_pred eCCCcEEE
Q psy467 161 GEDGVVRI 168 (845)
Q Consensus 161 s~DG~I~I 168 (845)
+.||.+.+
T Consensus 254 ~~dG~v~f 261 (1283)
T KOG1916|consen 254 ISDGSVGF 261 (1283)
T ss_pred ecCCccce
Confidence 99999988
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.93 Score=54.48 Aligned_cols=136 Identities=13% Similarity=0.140 Sum_probs=71.3
Q ss_pred CCCEEEEEeCCC------eEEEEECCCCeeEE--EecCCCCCeEEEEEcCCCCEEEEEECC------CcEEEEECCCCcE
Q psy467 27 SGQVLATGGDDK------KVNLWALGKSNCIM--SLSGHSTPVESVQFGNGEETLSAGCQS------GSIKIWNLAVPTV 92 (845)
Q Consensus 27 dg~~LaTgs~DG------~I~IWdl~t~~~i~--~l~~h~~~V~sLafSpdg~~LaSgs~D------GtV~VWDl~tg~~ 92 (845)
.+.+++.||.++ .+..+|..++.-.. .+. +...-.+++.. ++...++|+.+ .++..||..+++-
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W 361 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQW 361 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCce
Confidence 466778887763 57788877653222 222 22233444444 45677788887 3577888887763
Q ss_pred EEEEcCCCCCeEEEEE-ccCCCEEEEEECCCe-----EEEEECCCCceEEEEcCCCCCeEEEE-EecCCCEEEEEeCCCc
Q psy467 93 QRTLNGHKSSITSVDF-HPYGDYLCSGSLDSF-----IKLWDLRRKGCIYTYRGHSKSINSIR-FSPDGQWIASGGEDGV 165 (845)
Q Consensus 93 v~~l~~h~~~V~~laf-spdg~~Lasgs~DG~-----I~IWDl~t~~~l~~~~~h~~~V~sLa-fSPdg~~Lasgs~DG~ 165 (845)
.. +..-...=..+.. .-+|...++|+.||. |-.||..+.+.-..-. ......+.. ..-+|...++||.++.
T Consensus 362 ~~-~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~-m~~~r~~~gv~~~~g~iYi~GG~~~~ 439 (571)
T KOG4441|consen 362 TP-VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAP-MLTRRSGHGVAVLGGKLYIIGGGDGS 439 (571)
T ss_pred ec-cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCC-CCcceeeeEEEEECCEEEEEcCcCCC
Confidence 33 2211111111111 225777888998864 6777776543221111 111112111 1225777777776665
Q ss_pred E
Q psy467 166 V 166 (845)
Q Consensus 166 I 166 (845)
-
T Consensus 440 ~ 440 (571)
T KOG4441|consen 440 S 440 (571)
T ss_pred c
Confidence 4
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=1.1 Score=53.84 Aligned_cols=67 Identities=9% Similarity=0.072 Sum_probs=39.2
Q ss_pred EEEEEeCC------CeEEEEECCC---CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC---EEEEEecCCceEEEecC
Q psy467 294 LTTSSSAD------RTVNFWDLEK---FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG---LKVYGWEPARQYDAQPM 361 (845)
Q Consensus 294 lLatgs~D------G~I~IWDl~s---~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG---I~IWDl~tgk~l~tl~~ 361 (845)
+.+.|+.+ ..+..||..+ +..+..+.........+++ +|+..++|+.++ +..||..+.+-...-..
T Consensus 466 IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~ 543 (557)
T PHA02713 466 IYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHICHQ 543 (557)
T ss_pred EEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccccccchhhh
Confidence 56666643 2467899875 3444444433233333333 778888998887 77777777654433333
Q ss_pred C
Q psy467 362 G 362 (845)
Q Consensus 362 h 362 (845)
|
T Consensus 544 ~ 544 (557)
T PHA02713 544 H 544 (557)
T ss_pred c
Confidence 3
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.32 E-value=5.3 Score=43.32 Aligned_cols=115 Identities=13% Similarity=0.166 Sum_probs=85.3
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC
Q psy467 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG-HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132 (845)
Q Consensus 54 l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~-h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~ 132 (845)
+.+-...|.++.|+|+.+.|++......-.||=..+|+.+.++.- .-.....|.+..+|++.++--.++.+.++.+...
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 345556699999999999999998888888888888999988752 1233457888888888887778888888877654
Q ss_pred ceEEEE----------cCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 133 GCIYTY----------RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 133 ~~l~~~----------~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..+... ...+...-.++|+|....|..+-+-.-+.|
T Consensus 161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I 206 (316)
T COG3204 161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGI 206 (316)
T ss_pred ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEE
Confidence 322211 112556788999998888887777666777
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.9 Score=50.28 Aligned_cols=149 Identities=15% Similarity=0.163 Sum_probs=91.1
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-eEEEec-CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-CIMSLS-GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV- 89 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-~i~~l~-~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t- 89 (845)
...++|++++--. +. |+++. .+.|.+|++...+ ....-. .....+.++... +++++.|..-..|.++..+.
T Consensus 86 ~~~g~V~ai~~~~--~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~ 159 (321)
T PF03178_consen 86 EVKGPVTAICSFN--GR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEE 159 (321)
T ss_dssp EESS-EEEEEEET--TE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETT
T ss_pred eecCcceEhhhhC--CE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEcc
Confidence 3578899999863 44 44444 3689999997777 433322 123356666655 56999999888888886543
Q ss_pred CcEEEEEc--CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-------Cc----eEEEEcCCCCCeEEE---EEec-
Q psy467 90 PTVQRTLN--GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-------KG----CIYTYRGHSKSINSI---RFSP- 152 (845)
Q Consensus 90 g~~v~~l~--~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-------~~----~l~~~~~h~~~V~sL---afSP- 152 (845)
+..+..+. .....++++.|-++++.+++++.+|.|.++.... +. ....+. ....|+++ ++.|
T Consensus 160 ~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~-lg~~v~~~~~~~l~~~ 238 (321)
T PF03178_consen 160 NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFH-LGDIVNSFRRGSLIPR 238 (321)
T ss_dssp TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE--SS-EEEEEE--SS--
T ss_pred CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEE-CCCccceEEEEEeeec
Confidence 33233332 2345688888986767999999999999998752 22 223333 34557777 4444
Q ss_pred -CC------CEEEEEeCCCcEEE
Q psy467 153 -DG------QWIASGGEDGVVRI 168 (845)
Q Consensus 153 -dg------~~Lasgs~DG~I~I 168 (845)
.+ ..++.++.+|.|..
T Consensus 239 ~~~~~~~~~~~i~~~T~~G~Ig~ 261 (321)
T PF03178_consen 239 SGSSESPNRPQILYGTVDGSIGV 261 (321)
T ss_dssp SSSS-TTEEEEEEEEETTS-EEE
T ss_pred CCCCcccccceEEEEecCCEEEE
Confidence 12 24778888998885
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.055 Score=66.27 Aligned_cols=101 Identities=19% Similarity=0.314 Sum_probs=74.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCC-eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITS 105 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~-~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~ 105 (845)
-+..++.|+..|.+-..|.... .....=..-..+|++++|+.+|..++.|-.+|.|.+||+..++..+.+..|..+.+.
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 3456888888888888887432 111222334689999999999999999999999999999999998888766665554
Q ss_pred E---EEccCCCEEEEEECCCeEEEEEC
Q psy467 106 V---DFHPYGDYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 106 l---afspdg~~Lasgs~DG~I~IWDl 129 (845)
+ .+..++..++++...|. +|.+
T Consensus 178 vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 4 44445667788877776 4544
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=95.04 E-value=3.8 Score=42.97 Aligned_cols=46 Identities=7% Similarity=0.028 Sum_probs=38.0
Q ss_pred EEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 327 RLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 327 slafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
.++...+|.+.++.-..+ |.-.|..+|+.+..+.-....|++++|-
T Consensus 216 Gm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 216 GMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred cceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEec
Confidence 345566777766666666 8899999999999999889999999998
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=9.4 Score=47.08 Aligned_cols=100 Identities=7% Similarity=-0.003 Sum_probs=60.9
Q ss_pred CCeEEEEEcCCCCEEEEEEC-----CCcEEEEECCCCcEEEE-EcCCCCCeEEEEEccCCCEEEEEECC------CeEEE
Q psy467 59 TPVESVQFGNGEETLSAGCQ-----SGSIKIWNLAVPTVQRT-LNGHKSSITSVDFHPYGDYLCSGSLD------SFIKL 126 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~-----DGtV~VWDl~tg~~v~~-l~~h~~~V~~lafspdg~~Lasgs~D------G~I~I 126 (845)
-.+..+.|+||+++|+.+.. ...|++-|+.+|..+.. +. ... ..++|++|++.|+.+..+ ..|+.
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~-~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~ 203 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLD-NVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWR 203 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcccc-Ccc--eEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence 34777899999999887644 24588999988864322 22 111 459999999877665432 36888
Q ss_pred EECCCC--ceEEEEcCCCCCeE-EEEEecCCCEEEEEe
Q psy467 127 WDLRRK--GCIYTYRGHSKSIN-SIRFSPDGQWIASGG 161 (845)
Q Consensus 127 WDl~t~--~~l~~~~~h~~~V~-sLafSPdg~~Lasgs 161 (845)
+++.++ +-...+........ .+..+.|+++++..+
T Consensus 204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~ 241 (686)
T PRK10115 204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHL 241 (686)
T ss_pred EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEE
Confidence 888877 33333333333333 223333777665443
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=94.59 E-value=11 Score=43.28 Aligned_cols=134 Identities=11% Similarity=0.124 Sum_probs=68.7
Q ss_pred CCCEEEEEe-CCCeEEEEECC----CCeeEEEecC---CC----CCeEEEEEcCCCCEEEEEEC------CCcEEEEECC
Q psy467 27 SGQVLATGG-DDKKVNLWALG----KSNCIMSLSG---HS----TPVESVQFGNGEETLSAGCQ------SGSIKIWNLA 88 (845)
Q Consensus 27 dg~~LaTgs-~DG~I~IWdl~----t~~~i~~l~~---h~----~~V~sLafSpdg~~LaSgs~------DGtV~VWDl~ 88 (845)
..++|+..+ ..+.|.|.|+. ..+..+.+.. +. ..-..+..-|+|+.++++-. -|.+.+.|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 466777776 67789999986 3455555542 11 11222333468888877532 3568889988
Q ss_pred CCcEEEEEcCCC---CCeEEEEEccCCCEEEEEEC--------------------CCeEEEEECCCCceEEEEcCCCC--
Q psy467 89 VPTVQRTLNGHK---SSITSVDFHPYGDYLCSGSL--------------------DSFIKLWDLRRKGCIYTYRGHSK-- 143 (845)
Q Consensus 89 tg~~v~~l~~h~---~~V~~lafspdg~~Lasgs~--------------------DG~I~IWDl~t~~~l~~~~~h~~-- 143 (845)
+.+......... .--..+.|.|..+.+++... ..++.+||+.+.+.++++.-...
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~ 245 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ 245 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence 888777765432 23456778888888887642 35799999999999999875432
Q ss_pred CeEEEEEecC--CCEEEEE
Q psy467 144 SINSIRFSPD--GQWIASG 160 (845)
Q Consensus 144 ~V~sLafSPd--g~~Lasg 160 (845)
.+..+.|..+ ..+-+++
T Consensus 246 ~pLEvRflH~P~~~~gFvg 264 (461)
T PF05694_consen 246 MPLEVRFLHDPDANYGFVG 264 (461)
T ss_dssp EEEEEEE-SSTT--EEEEE
T ss_pred ceEEEEecCCCCccceEEE
Confidence 3556777554 4443333
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=94.47 E-value=17 Score=44.88 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=68.8
Q ss_pred CcEEEEEEecCCCCEEEEEeC-----CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC------CcEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGD-----DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS------GSIKI 84 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~-----DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D------GtV~V 84 (845)
-.+..+.+|| +|++||.+.. ...|++-|+.++..+...-... -..++|++|++.|+....+ ..|..
T Consensus 127 ~~l~~~~~Sp-dg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~ 203 (686)
T PRK10115 127 YTLGGMAITP-DNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--EPSFVWANDSWTFYYVRKHPVTLLPYQVWR 203 (686)
T ss_pred EEEeEEEECC-CCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--ceEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence 3577789999 8998887633 2368889998876432221111 1569999999877665442 36888
Q ss_pred EECCCC--cEEEEEcCCCCCeE-EEEEccCCCEEEEEEC---CCeEEEEEC
Q psy467 85 WNLAVP--TVQRTLNGHKSSIT-SVDFHPYGDYLCSGSL---DSFIKLWDL 129 (845)
Q Consensus 85 WDl~tg--~~v~~l~~h~~~V~-~lafspdg~~Lasgs~---DG~I~IWDl 129 (845)
+++.++ +....+........ .+..+.++++++..+. ++.+.+|+.
T Consensus 204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 888887 33344443333333 3333447887665443 356888885
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=94.09 E-value=11 Score=41.47 Aligned_cols=144 Identities=16% Similarity=0.219 Sum_probs=69.8
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec---CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC-CCcE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS---GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA-VPTV 92 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~---~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~-tg~~ 92 (845)
...++.|.. ...+++| ..+ +.+...+.|+.-..+. .-......+....++..++ ++..|.| |... .|+.
T Consensus 63 ~l~~I~f~~--~~g~ivG-~~g-~ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l-~~~~G~i--y~T~DgG~t 135 (302)
T PF14870_consen 63 HLNSISFDG--NEGWIVG-EPG-LLLHTTDGGKTWERVPLSSKLPGSPFGITALGDGSAEL-AGDRGAI--YRTTDGGKT 135 (302)
T ss_dssp EEEEEEEET--TEEEEEE-ETT-EEEEESSTTSS-EE----TT-SS-EEEEEEEETTEEEE-EETT--E--EEESSTTSS
T ss_pred eEEEEEecC--CceEEEc-CCc-eEEEecCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEE-EcCCCcE--EEeCCCCCC
Confidence 466777754 3444444 444 4444444454433332 1122333444433443333 3344543 3333 3332
Q ss_pred E-EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 93 Q-RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 93 v-~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
- .....-.+.+..+..++||++++++.......-||-....-...-+.....|..|.|.|++.+.+++ ..|.+++
T Consensus 136 W~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~ 211 (302)
T PF14870_consen 136 WQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQF 211 (302)
T ss_dssp EEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEE
T ss_pred eeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEE
Confidence 2 2234455678889999999988888766666788865332222233356789999999998766544 8888887
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=94.07 E-value=8.5 Score=41.44 Aligned_cols=154 Identities=11% Similarity=0.028 Sum_probs=96.2
Q ss_pred cEEEEEEecCCCCEEEEEeCCC--eEEEEECCCCeeEEEecCC-CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDK--KVNLWALGKSNCIMSLSGH-STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG--~I~IWdl~t~~~i~~l~~h-~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
-...+.|.. +|.++-+.|.-| .|+.+|+.+++......-. .---..++...| ....-.-.++...+||..+.+.+
T Consensus 46 FTQGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l~qLTWk~~~~f~yd~~tl~~~ 123 (264)
T PF05096_consen 46 FTQGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KLYQLTWKEGTGFVYDPNTLKKI 123 (264)
T ss_dssp EEEEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EEEEEESSSSEEEEEETTTTEEE
T ss_pred cCccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EEEEEEecCCeEEEEccccceEE
Confidence 466788866 778888887766 7999999999877654321 222234444433 33333446899999999999999
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCC-----CCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH-----SKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h-----~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.++. ..+.-+.++ .|++.|+.......|+++|..+.+....+.-. -..++-+.|. +|...|-.-....|..
T Consensus 124 ~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~ 199 (264)
T PF05096_consen 124 GTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVR 199 (264)
T ss_dssp EEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEE
Confidence 8886 345566776 56777888777889999999888777766432 1245566666 4554444444444544
Q ss_pred eeeeccCCceeEEEECCCCcc
Q psy467 169 GASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.|..+|+.
T Consensus 200 -------------Idp~tG~V 207 (264)
T PF05096_consen 200 -------------IDPETGKV 207 (264)
T ss_dssp -------------EETTT-BE
T ss_pred -------------EeCCCCeE
Confidence 68777776
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.15 Score=52.82 Aligned_cols=104 Identities=17% Similarity=0.223 Sum_probs=65.5
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeE-EEecCCCCCeEEEE-EcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCC-CCe
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCI-MSLSGHSTPVESVQ-FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK-SSI 103 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i-~~l~~h~~~V~sLa-fSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~-~~V 103 (845)
.+.-+++|+.+|.|.+|+...-... .....-...|.++- --.++.+..+++.+|.|+.|++.-++.+.....|. .++
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~ 148 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG 148 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence 4567889999999999987521111 11111222333332 22355688899999999999999888888777777 444
Q ss_pred EEEEEccCCCEEEEE--ECCCeEEEEECC
Q psy467 104 TSVDFHPYGDYLCSG--SLDSFIKLWDLR 130 (845)
Q Consensus 104 ~~lafspdg~~Lasg--s~DG~I~IWDl~ 130 (845)
.....+..++.++.+ |.|..++.|++.
T Consensus 149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 149 EELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred ceeEEecCCceEEeeccccchhhhhcchh
Confidence 444444455555555 555556666554
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=93.88 E-value=3.5 Score=44.19 Aligned_cols=145 Identities=12% Similarity=0.116 Sum_probs=89.0
Q ss_pred cEEEEEEecCCCCEEEEEe---CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE-CCCCcE
Q psy467 17 SVNCLALGKKSGQVLATGG---DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN-LAVPTV 92 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs---~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD-l~tg~~ 92 (845)
.+.+.++++ +++.+|... ....+.++... .....+. ....+..-.|++++...+....+...+++. ..++..
T Consensus 25 ~~~s~AvS~-dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~ 100 (253)
T PF10647_consen 25 DVTSPAVSP-DGSRVAAVSEGDGGRSLYVGPAG--GPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTG 100 (253)
T ss_pred cccceEECC-CCCeEEEEEEcCCCCEEEEEcCC--Ccceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcc
Confidence 689999999 777666554 33345555543 3232221 233788889999987777666666667774 333322
Q ss_pred E-EEEcC--CCCCeEEEEEccCCCEEEEEE---CCCeEEEEECC---CC------ceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 93 Q-RTLNG--HKSSITSVDFHPYGDYLCSGS---LDSFIKLWDLR---RK------GCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 93 v-~~l~~--h~~~V~~lafspdg~~Lasgs---~DG~I~IWDl~---t~------~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
. ..+.. ....|..+.++|||..++... .++.|.+--+. .+ ............+..++|.+++.++
T Consensus 101 ~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~ 180 (253)
T PF10647_consen 101 EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLV 180 (253)
T ss_pred eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEE
Confidence 2 22221 122899999999999887655 34677776553 22 1112222334678999999998877
Q ss_pred EEEeCCCc
Q psy467 158 ASGGEDGV 165 (845)
Q Consensus 158 asgs~DG~ 165 (845)
+.+...+.
T Consensus 181 V~~~~~~~ 188 (253)
T PF10647_consen 181 VLGRSAGG 188 (253)
T ss_pred EEeCCCCC
Confidence 76655443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=93.88 E-value=18 Score=42.88 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=73.7
Q ss_pred cCCCcEEEEEEecC----CCCEEEEEeCCCeEEEEECC-----CCeeEEEecCC---CC--CeEEEEEcCCCCEEEEEEC
Q psy467 13 AHGASVNCLALGKK----SGQVLATGGDDKKVNLWALG-----KSNCIMSLSGH---ST--PVESVQFGNGEETLSAGCQ 78 (845)
Q Consensus 13 gH~~~V~~LafSp~----dg~~LaTgs~DG~I~IWdl~-----t~~~i~~l~~h---~~--~V~sLafSpdg~~LaSgs~ 78 (845)
|.-..|..+.|.|. ...+||+-. ...|.||.+. ..+.+..-..+ .- --..+.|+|....|++-..
T Consensus 54 GqFEhV~GlsW~P~~~~~~paLLAVQH-kkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~ 132 (671)
T PF15390_consen 54 GQFEHVHGLSWAPPCTADTPALLAVQH-KKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTA 132 (671)
T ss_pred eccceeeeeeecCcccCCCCceEEEec-cceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEec
Confidence 34467999999983 234666655 5689999874 22333222111 11 1245679999988887765
Q ss_pred CCcEEEEECCCC--cEEEEEcCCCCCeEEEEEccCCCEEEEEEC-CCeEEEEECCC
Q psy467 79 SGSIKIWNLAVP--TVQRTLNGHKSSITSVDFHPYGDYLCSGSL-DSFIKLWDLRR 131 (845)
Q Consensus 79 DGtV~VWDl~tg--~~v~~l~~h~~~V~~lafspdg~~Lasgs~-DG~I~IWDl~t 131 (845)
...-.+.++... +....++ ..+-|.|.+|.+||+.|+++-. .=.-++||-..
T Consensus 133 ~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 133 RDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 555456666433 3334454 5678999999999988876543 33467888643
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=93.87 E-value=13 Score=41.43 Aligned_cols=103 Identities=13% Similarity=0.137 Sum_probs=57.2
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee---EEEe----cCCCCCeEEEEEcCC---CCEEEEEEC-C------
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC---IMSL----SGHSTPVESVQFGNG---EETLSAGCQ-S------ 79 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~---i~~l----~~h~~~V~sLafSpd---g~~LaSgs~-D------ 79 (845)
.-++|+|.| +|+++++ ...|.|++++ .++.. +..+ .........++++|+ ..+|..... .
T Consensus 3 ~P~~~a~~p-dG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~ 79 (331)
T PF07995_consen 3 NPRSMAFLP-DGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD 79 (331)
T ss_dssp SEEEEEEET-TSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred CceEEEEeC-CCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence 357899999 7887665 5699999999 44443 3333 224557899999994 234333322 1
Q ss_pred --CcEEEEECCCC-------cEE-EEEcC---CCCCeEEEEEccCCCEEEEEECCC
Q psy467 80 --GSIKIWNLAVP-------TVQ-RTLNG---HKSSITSVDFHPYGDYLCSGSLDS 122 (845)
Q Consensus 80 --GtV~VWDl~tg-------~~v-~~l~~---h~~~V~~lafspdg~~Lasgs~DG 122 (845)
..|.-|....+ +.+ ..+.. .......|.|.|||.+.++.+..+
T Consensus 80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~ 135 (331)
T PF07995_consen 80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG 135 (331)
T ss_dssp EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence 24555555433 111 12222 233456799999996666655443
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.82 E-value=2.1 Score=45.98 Aligned_cols=143 Identities=13% Similarity=0.064 Sum_probs=92.2
Q ss_pred EEEEEEecCCCCEEEEEeCCCe-EEEEECCCCeeEEEecCCCCC--eEEEEEcCCCCEEEEEEC-----CCcEEEEECCC
Q psy467 18 VNCLALGKKSGQVLATGGDDKK-VNLWALGKSNCIMSLSGHSTP--VESVQFGNGEETLSAGCQ-----SGSIKIWNLAV 89 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~-I~IWdl~t~~~i~~l~~h~~~--V~sLafSpdg~~LaSgs~-----DGtV~VWDl~t 89 (845)
-..|+|+|....-++.+-.-|+ ..++|..+.....++...++. --.=.|||||.+|...-. -|.|-|||.+.
T Consensus 70 ~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~ 149 (366)
T COG3490 70 GHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDARE 149 (366)
T ss_pred cCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccc
Confidence 3456777766667777766665 567888777665554321111 112258999999987644 37899999985
Q ss_pred C-cEEEEEcCCCCCeEEEEEccCCCEEEEEEC------------------CCeEEEEECCCCceEEEEc----CCCCCeE
Q psy467 90 P-TVQRTLNGHKSSITSVDFHPYGDYLCSGSL------------------DSFIKLWDLRRKGCIYTYR----GHSKSIN 146 (845)
Q Consensus 90 g-~~v~~l~~h~~~V~~lafspdg~~Lasgs~------------------DG~I~IWDl~t~~~l~~~~----~h~~~V~ 146 (845)
+ +.+..+..|.-.-..+.|.+||+.++.+.. .-++.+.|..++..+.+.. .+.-.|.
T Consensus 150 ~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiR 229 (366)
T COG3490 150 GFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIR 229 (366)
T ss_pred ccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhccee
Confidence 4 556677778777788999999998887642 1234555555565554332 2345677
Q ss_pred EEEEecCCCEEEEE
Q psy467 147 SIRFSPDGQWIASG 160 (845)
Q Consensus 147 sLafSPdg~~Lasg 160 (845)
.++..+||..++.+
T Consensus 230 Hld~g~dgtvwfgc 243 (366)
T COG3490 230 HLDIGRDGTVWFGC 243 (366)
T ss_pred eeeeCCCCcEEEEE
Confidence 77777777655443
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.69 E-value=2.4 Score=50.82 Aligned_cols=91 Identities=13% Similarity=0.110 Sum_probs=44.1
Q ss_pred CCCEEEEEeCC------CeEEEEECCCCeeE--EEecCCCCCeEEEEEcCCCCEEEEEECCC-----cEEEEECCCCcEE
Q psy467 27 SGQVLATGGDD------KKVNLWALGKSNCI--MSLSGHSTPVESVQFGNGEETLSAGCQSG-----SIKIWNLAVPTVQ 93 (845)
Q Consensus 27 dg~~LaTgs~D------G~I~IWdl~t~~~i--~~l~~h~~~V~sLafSpdg~~LaSgs~DG-----tV~VWDl~tg~~v 93 (845)
++.+++.||.+ ..+..||..+..-. ..+....... +++ .-++...+.|+.++ ++..||..+++-.
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~-~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~ 380 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLA-VIDDTIYAIGGQNGTNVERTIECYTMGDDKWK 380 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEE-EECCEEEEECCcCCCCCCceEEEEECCCCeEE
Confidence 55677777753 24667777654321 1111111111 122 22566777777653 4888998876432
Q ss_pred E--EEcCCCCCeEEEEEccCCCEEEEEECC
Q psy467 94 R--TLNGHKSSITSVDFHPYGDYLCSGSLD 121 (845)
Q Consensus 94 ~--~l~~h~~~V~~lafspdg~~Lasgs~D 121 (845)
. .+.........+. -+|...+.|+.+
T Consensus 381 ~~~~mp~~r~~~~~~~--~~g~IYviGG~~ 408 (557)
T PHA02713 381 MLPDMPIALSSYGMCV--LDQYIYIIGGRT 408 (557)
T ss_pred ECCCCCcccccccEEE--ECCEEEEEeCCC
Confidence 2 1111111111222 256666777755
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=93.31 E-value=13 Score=42.74 Aligned_cols=121 Identities=16% Similarity=0.102 Sum_probs=56.4
Q ss_pred CCCEEEEEE-CCCcEEEEECCC----CcEEEEEcC---CC----CCeEEEEEccCCCEEEEE--EC----CCeEEEEECC
Q psy467 69 GEETLSAGC-QSGSIKIWNLAV----PTVQRTLNG---HK----SSITSVDFHPYGDYLCSG--SL----DSFIKLWDLR 130 (845)
Q Consensus 69 dg~~LaSgs-~DGtV~VWDl~t----g~~v~~l~~---h~----~~V~~lafspdg~~Lasg--s~----DG~I~IWDl~ 130 (845)
+.++|+..+ .++.|.|.|+.+ .+..+.+.. +. ..-..+..-|+|+.++++ +. -|-+.++|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 456777776 578999999984 355555542 11 122334445788888774 22 2468889988
Q ss_pred CCceEEEEcCCC---CCeEEEEEecCCCEEEEEeCCCcEEEeeee-------ccCCceeEEEECCCCcc
Q psy467 131 RKGCIYTYRGHS---KSINSIRFSPDGQWIASGGEDGVVRIGASF-------HLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 131 t~~~l~~~~~h~---~~V~sLafSPdg~~Lasgs~DG~I~I~~~~-------~~~~~~I~vWDl~tg~~ 189 (845)
+.+.+....... .--..+-|.|..+.+++.....--.+...| ..-...+++||+.+.+.
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~ 234 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKL 234 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEE
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcE
Confidence 888877776432 233567788988888886532110000000 01234677799998888
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.25 Score=38.76 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=29.8
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC 50 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~ 50 (845)
...|.+++|+| ..++||.|..+|.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P-~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCP-TMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECC-CCCEEEEEECCCeEEEEEC-CCcC
Confidence 45799999999 9999999999999999998 4443
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=93.00 E-value=4.1 Score=46.15 Aligned_cols=141 Identities=9% Similarity=0.042 Sum_probs=79.3
Q ss_pred CcEEEEEEecCCCCEEEEEe-----------CCC-eEEEEECCC--Ce--eEEEecCCCCCeEEEEEcCCCCEEEEEECC
Q psy467 16 ASVNCLALGKKSGQVLATGG-----------DDK-KVNLWALGK--SN--CIMSLSGHSTPVESVQFGNGEETLSAGCQS 79 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs-----------~DG-~I~IWdl~t--~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs~D 79 (845)
....+|+|.+ +|+++++-. ..+ .|.+++-.+ ++ ....+...-.....+++.+++ .++ ++..
T Consensus 14 ~~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~ 90 (367)
T TIGR02604 14 RNPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPP 90 (367)
T ss_pred CCCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCC
Confidence 5677899998 888777642 223 677776432 32 223443334456889999988 444 4344
Q ss_pred CcEEEE-ECCCC-----cE--E-EEEcC----CCCCeEEEEEccCCCEEEEEECC-------------------CeEEEE
Q psy467 80 GSIKIW-NLAVP-----TV--Q-RTLNG----HKSSITSVDFHPYGDYLCSGSLD-------------------SFIKLW 127 (845)
Q Consensus 80 GtV~VW-Dl~tg-----~~--v-~~l~~----h~~~V~~lafspdg~~Lasgs~D-------------------G~I~IW 127 (845)
.|..| |.... +. + ..+.. +......++|.|||.+.++.+.. |.|.-+
T Consensus 91 -~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~ 169 (367)
T TIGR02604 91 -DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRY 169 (367)
T ss_pred -eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEE
Confidence 44433 54321 21 1 12322 12346789999999866554421 345555
Q ss_pred ECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 128 Dl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
+...++. ..+...-.....++|+++|+++++-.
T Consensus 170 ~pdg~~~-e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 170 NPDGGKL-RVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred ecCCCeE-EEEecCcCCCccceECCCCCEEEEcc
Confidence 5554333 22322233457889999888766543
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=92.72 E-value=16 Score=39.11 Aligned_cols=149 Identities=15% Similarity=0.075 Sum_probs=83.6
Q ss_pred CeEEEEEcCCCCEEEEEE---CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEE-CCCCceE
Q psy467 60 PVESVQFGNGEETLSAGC---QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD-LRRKGCI 135 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs---~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWD-l~t~~~l 135 (845)
.+.+.+++++++.+|... ....+.++... .....+. ....+....|++++...+....+....++. ..++...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--Ccceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 688999999999887765 23445555543 3333322 223678889999987766666666666663 3333222
Q ss_pred -EEEcC--CCCCeEEEEEecCCCEEEEEe---CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe
Q psy467 136 -YTYRG--HSKSINSIRFSPDGQWIASGG---EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 136 -~~~~~--h~~~V~sLafSPdg~~Lasgs---~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
..... ....|..+++||||..++... .++.+.+........+.- .-+.....+.......+..+.|.+++.+
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~--~~l~~~~~~~~~~~~~v~~v~W~~~~~L 179 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVP--RRLTGPRRVAPPLLSDVTDVAWSDDSTL 179 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCc--ceeccceEecccccCcceeeeecCCCEE
Confidence 11211 122899999999999887765 356777711111111100 0000000001111346678899988886
Q ss_pred EEEE
Q psy467 210 RKSF 213 (845)
Q Consensus 210 l~~~ 213 (845)
+..-
T Consensus 180 ~V~~ 183 (253)
T PF10647_consen 180 VVLG 183 (253)
T ss_pred EEEe
Confidence 5543
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=92.40 E-value=7.4 Score=45.84 Aligned_cols=86 Identities=10% Similarity=-0.001 Sum_probs=49.7
Q ss_pred EEEEEeCCCeEEEEECCCC--eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC--EEEEEecCCceE----EEecCCCCC
Q psy467 294 LTTSSSADRTVNFWDLEKF--SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--LKVYGWEPARQY----DAQPMGWGK 365 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~--~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk~l----~tl~~h~~~ 365 (845)
+|++-..+..-.+++++.. .....+. ..+-|.|.||.+||+.|+++-... -+|||-...... ..+-.-.+.
T Consensus 126 iL~VLT~~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qKtL~~CsfcPVFdv~~~ 204 (671)
T PF15390_consen 126 ILTVLTARDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQKTLHRCSFCPVFDVGGY 204 (671)
T ss_pred eEEEEecCceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecCchhhhhhCCcceeecCCCc
Confidence 5665554444456666433 2233343 467899999999999999887777 667764322111 111123356
Q ss_pred eEEEEEc-CCceEEEE
Q psy467 366 VQDLAVT-GTQLWFRR 380 (845)
Q Consensus 366 VtsVafS-dg~lLaaS 380 (845)
|.++.-. |.+.-+++
T Consensus 205 Icsi~AT~dsqVAvaT 220 (671)
T PF15390_consen 205 ICSIEATVDSQVAVAT 220 (671)
T ss_pred eEEEEEeccceEEEEe
Confidence 7777666 44444443
|
|
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=92.38 E-value=20 Score=39.33 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=54.2
Q ss_pred EEEeCCCeEEEEECCCCeEEEEecC--CCCCEEEEEEeC------CCCEEEEEeCCC-EEEEEecCCceEEEecCCCC--
Q psy467 296 TSSSADRTVNFWDLEKFSLVSTTEK--NSSTIRRLTFSE------GGECLLGGDTEG-LKVYGWEPARQYDAQPMGWG-- 364 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~~l~tl~g--h~~~VtslafSp------dG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~-- 364 (845)
+.|..-|.|-+||+. ++.++++.. .-..-+.|+..| .|.+|+---.|| |..||..+++.+..+....+
T Consensus 216 v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~p 294 (336)
T TIGR03118 216 VAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHP 294 (336)
T ss_pred ccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCe
Confidence 345556899999987 677777742 223456666655 577888777889 99999999998887765443
Q ss_pred ----CeEEEEEc
Q psy467 365 ----KVQDLAVT 372 (845)
Q Consensus 365 ----~VtsVafS 372 (845)
.++.++|.
T Consensus 295 i~i~GLWgL~fG 306 (336)
T TIGR03118 295 VKVDGLWSLTFG 306 (336)
T ss_pred EEecCeEEeeeC
Confidence 46777776
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=92.29 E-value=6.5 Score=47.32 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=58.7
Q ss_pred CCCEEEEEECC------CcEEEEECCCCcEEEEEcC-CCCCeEEEEEccCCCEEEEEECC-C-----eEEEEECCCCceE
Q psy467 69 GEETLSAGCQS------GSIKIWNLAVPTVQRTLNG-HKSSITSVDFHPYGDYLCSGSLD-S-----FIKLWDLRRKGCI 135 (845)
Q Consensus 69 dg~~LaSgs~D------GtV~VWDl~tg~~v~~l~~-h~~~V~~lafspdg~~Lasgs~D-G-----~I~IWDl~t~~~l 135 (845)
.+..++.|+.+ ..+..+|..++.......- ....-.++++. ++...++|+.| | ++..||..+++-.
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~ 362 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT 362 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence 45566777766 3577888887743332221 22223344444 45677888888 3 5778888766532
Q ss_pred E--EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC
Q psy467 136 Y--TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV 187 (845)
Q Consensus 136 ~--~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg 187 (845)
. .+...........+ +|...|+||.||.-.+ ..+..||..+.
T Consensus 363 ~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l--------~svE~YDp~~~ 406 (571)
T KOG4441|consen 363 PVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSL--------NSVECYDPVTN 406 (571)
T ss_pred ccCCccCccccceeEEE--CCEEEEEecccccccc--------ccEEEecCCCC
Confidence 2 11111111111111 5778888888876555 24444665543
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.35 Score=37.93 Aligned_cols=34 Identities=12% Similarity=0.263 Sum_probs=30.1
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~ 92 (845)
...|.+++|+|..++||.++.+|.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 457999999999999999999999999999 4543
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=91.27 E-value=6.3 Score=46.86 Aligned_cols=104 Identities=10% Similarity=0.043 Sum_probs=51.4
Q ss_pred CCCEEEEEeCCC------eEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCcEE
Q psy467 27 SGQVLATGGDDK------KVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS-----GSIKIWNLAVPTVQ 93 (845)
Q Consensus 27 dg~~LaTgs~DG------~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D-----GtV~VWDl~tg~~v 93 (845)
++.+++.||.++ .+..||..+.+-... +.........+. -++...+.|+.+ ..+..||..+++-.
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 371 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGESKWR 371 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCCcee
Confidence 456667776542 467778765543221 111111222222 256677777764 35778888766432
Q ss_pred EEEcC-CCCCeEEEEEccCCCEEEEEECC------CeEEEEECCCCc
Q psy467 94 RTLNG-HKSSITSVDFHPYGDYLCSGSLD------SFIKLWDLRRKG 133 (845)
Q Consensus 94 ~~l~~-h~~~V~~lafspdg~~Lasgs~D------G~I~IWDl~t~~ 133 (845)
..-.. +...-.+++ .-+++..+.|+.+ ..+..||..+++
T Consensus 372 ~~~~lp~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~ 417 (534)
T PHA03098 372 EEPPLIFPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNK 417 (534)
T ss_pred eCCCcCcCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCe
Confidence 21110 111111222 2345666666632 357888887654
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.65 Score=48.33 Aligned_cols=99 Identities=14% Similarity=0.236 Sum_probs=60.9
Q ss_pred CCEEEEEECCCcEEEEECCCCcEE-EEEcCCCCCeEE-EEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC-CCeE
Q psy467 70 EETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITS-VDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-KSIN 146 (845)
Q Consensus 70 g~~LaSgs~DGtV~VWDl~tg~~v-~~l~~h~~~V~~-lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~-~~V~ 146 (845)
+..+++|+.+|.|.+|++...... ..+......|-+ +.-..++.+.++++.||.|+.|++.-.+.+.....|. .++.
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e 149 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGE 149 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcc
Confidence 456889999999999998732111 111112222322 2333355688999999999999998777766665565 3444
Q ss_pred EEEEecCCCEEEEE--eCCCcEEE
Q psy467 147 SIRFSPDGQWIASG--GEDGVVRI 168 (845)
Q Consensus 147 sLafSPdg~~Lasg--s~DG~I~I 168 (845)
.+..+..+.+++.+ +.|..++.
T Consensus 150 ~~ivv~sd~~i~~a~~S~d~~~k~ 173 (238)
T KOG2444|consen 150 ELIVVGSDEFLKIADTSHDRVLKK 173 (238)
T ss_pred eeEEecCCceEEeeccccchhhhh
Confidence 44444445555555 55555555
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=90.64 E-value=9.4 Score=42.69 Aligned_cols=147 Identities=12% Similarity=0.070 Sum_probs=84.0
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEE-EECCCCeeEEEe-cCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNL-WALGKSNCIMSL-SGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~I-Wdl~t~~~i~~l-~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~ 92 (845)
.+.+.++.+.+ ++.+++++. .|.+.. ++ ..++.-... ..-...++++.+.++++.++++ ..|.+.+=..+.|..
T Consensus 172 ~g~~~~i~~~~-~g~~v~~g~-~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~s 247 (334)
T PRK13684 172 AGVVRNLRRSP-DGKYVAVSS-RGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLES 247 (334)
T ss_pred cceEEEEEECC-CCeEEEEeC-CceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCc
Confidence 45789999988 776666554 454432 22 222222222 2345678999999998877766 567664323444443
Q ss_pred EEEEcCC----CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc---CCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 93 QRTLNGH----KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 93 v~~l~~h----~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~---~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
-...... ...+..+.+.+++..++ ++.+|.|. .....++.-.... ........+.|..+++.++ ++..|.
T Consensus 248 W~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~ 324 (334)
T PRK13684 248 WSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGV 324 (334)
T ss_pred cccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCce
Confidence 3322211 23477889998776554 55567554 3344333322221 2223577788876666655 456677
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
|..
T Consensus 325 il~ 327 (334)
T PRK13684 325 LLR 327 (334)
T ss_pred EEE
Confidence 766
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=90.07 E-value=1.4 Score=54.84 Aligned_cols=147 Identities=9% Similarity=0.017 Sum_probs=92.0
Q ss_pred EeccCCC-cEEEEEEecCCCCEEEEEe--CCCeEEEEECCCCeeE-----EEec------CCCCCeEEEEEcCCC-CEEE
Q psy467 10 DFMAHGA-SVNCLALGKKSGQVLATGG--DDKKVNLWALGKSNCI-----MSLS------GHSTPVESVQFGNGE-ETLS 74 (845)
Q Consensus 10 ~L~gH~~-~V~~LafSp~dg~~LaTgs--~DG~I~IWdl~t~~~i-----~~l~------~h~~~V~sLafSpdg-~~La 74 (845)
++.-|.. .|..+..++ |+...++.. .+-.|..||+.+-..- .-+. ....-..++.|+|.- ...+
T Consensus 94 t~~v~k~~pi~~~v~~~-D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~a 172 (1405)
T KOG3630|consen 94 TFKVEKEIPIVIFVCFH-DATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSA 172 (1405)
T ss_pred ceeeeccccceEEEecc-CCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhh
Confidence 3444433 566666666 565555433 3337888998643221 1111 123446688898843 2355
Q ss_pred EEECCCcEEEEECCCCcE-EEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC----CCCCeEEEE
Q psy467 75 AGCQSGSIKIWNLAVPTV-QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG----HSKSINSIR 149 (845)
Q Consensus 75 Sgs~DGtV~VWDl~tg~~-v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~----h~~~V~sLa 149 (845)
.+..|+.|++..+..... +..+. ....++|++|+|.|+.+++|-..|++.-|... .+....+.+ ....|.|++
T Consensus 173 v~l~dlsl~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~ 250 (1405)
T KOG3630|consen 173 VDLSDLSLRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVT 250 (1405)
T ss_pred hhccccchhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEE
Confidence 666789998887764322 23333 45678999999999999999999999988764 343333322 246799999
Q ss_pred EecCCCEEEE
Q psy467 150 FSPDGQWIAS 159 (845)
Q Consensus 150 fSPdg~~Las 159 (845)
|-....++++
T Consensus 251 Wl~t~eflvv 260 (1405)
T KOG3630|consen 251 WLSTQEFLVV 260 (1405)
T ss_pred EecceeEEEE
Confidence 9865555543
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.74 E-value=34 Score=37.31 Aligned_cols=138 Identities=9% Similarity=0.035 Sum_probs=88.7
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCC--CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC--
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGH--STPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-- 90 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h--~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg-- 90 (845)
.+-+..+.++ ++++..+..+.-++|.|+.+......+..- .+.-.++ .-.|++...+..|.-+.+.|+.+.
T Consensus 86 ~~l~~Dv~vs---e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv--~vsGn~aYVadlddgfLivdvsdpss 160 (370)
T COG5276 86 RDLFADVRVS---EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGV--YVSGNYAYVADLDDGFLIVDVSDPSS 160 (370)
T ss_pred hhhhheeEec---ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEE--EecCCEEEEeeccCcEEEEECCCCCC
Confidence 3455666774 478888888888999999776544333221 1333444 445888888887777778888764
Q ss_pred -cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc---eEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 91 -TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG---CIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 91 -~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~---~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
...............++.+ |++-..+..|+-+.+.|+.... .+.... ....+.++..+++..+++..
T Consensus 161 P~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n-~g~g~~sv~vsdnr~y~vvy 231 (370)
T COG5276 161 PQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYN-TGPGTYSVSVSDNRAYLVVY 231 (370)
T ss_pred ceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEe-cCCceEEEEecCCeeEEEEc
Confidence 3344444444445667776 7788888899999999997543 333332 33367777777665555443
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=89.67 E-value=4.7 Score=46.50 Aligned_cols=137 Identities=16% Similarity=0.201 Sum_probs=88.6
Q ss_pred CCCEEE-EEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCC--------CEEEEEECCCcEEEEECCC-CcEEEEE
Q psy467 27 SGQVLA-TGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE--------ETLSAGCQSGSIKIWNLAV-PTVQRTL 96 (845)
Q Consensus 27 dg~~La-Tgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg--------~~LaSgs~DGtV~VWDl~t-g~~v~~l 96 (845)
+..++. .|+....++--|++-|+.+..+.-|..- -+.|.|+. +.|+ |-.+..|.-.|.+- |..+...
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlv-GlS~~svFrIDPR~~gNKi~v~ 554 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLV-GLSDYSVFRIDPRARGNKIKVV 554 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEE-eecccceEEecccccCCceeee
Confidence 445544 4555567888889999999999877765 57788743 2343 44455555556543 3222222
Q ss_pred cC----CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 97 NG----HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 97 ~~----h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.. ......+..-. .+.++|+++..|.|++||--..+....+.+....|..+..+.+|+++++.|.. .+.+
T Consensus 555 esKdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL 628 (776)
T COG5167 555 ESKDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLL 628 (776)
T ss_pred eehhccccccccccccc-cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEE
Confidence 10 11223333333 34599999999999999975444445566677889999999999998887764 5555
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=89.63 E-value=13 Score=38.81 Aligned_cols=135 Identities=15% Similarity=0.218 Sum_probs=78.7
Q ss_pred CEEEEEeCCCeEEEEECC--CCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC---C---cEEEE-ECCCC----cEEE-
Q psy467 29 QVLATGGDDKKVNLWALG--KSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS---G---SIKIW-NLAVP----TVQR- 94 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~--t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D---G---tV~VW-Dl~tg----~~v~- 94 (845)
+.|+.+...+.|.+|++. ......++.. -+.|..+.++..|+||++--.+ . .+++| |++.. .++.
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 566555666789999987 3445566663 4789999999999999996432 2 56665 33321 2222
Q ss_pred EEcCC---------------------CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-E-----EEEc----CC--
Q psy467 95 TLNGH---------------------KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC-I-----YTYR----GH-- 141 (845)
Q Consensus 95 ~l~~h---------------------~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~-l-----~~~~----~h-- 141 (845)
.+-+| ..++.+++..|-..-|++|+ ++.+.+|.+..... . ..|. .|
T Consensus 108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~~~~~~~~~lDFe~~l~~~~~ 186 (215)
T PF14761_consen 108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQTIQSEKFSFLDFERSLIDHID 186 (215)
T ss_pred EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEEEEecccccEEechhhhhheec
Confidence 22221 23566777777544455555 45788888754322 1 1111 11
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 142 SKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 142 ~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.-.+..+++. +.++|..+.. .+++
T Consensus 187 ~~~p~~v~ic--~~yiA~~s~~-ev~V 210 (215)
T PF14761_consen 187 NFKPTQVAIC--EGYIAVMSDL-EVLV 210 (215)
T ss_pred CceEEEEEEE--eeEEEEecCC-EEEE
Confidence 1124556666 6778777654 4555
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=89.55 E-value=16 Score=44.37 Aligned_cols=84 Identities=15% Similarity=0.188 Sum_probs=52.3
Q ss_pred CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE----cCCCCCeEEEEEecCCC
Q psy467 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY----RGHSKSINSIRFSPDGQ 155 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~----~~h~~~V~sLafSPdg~ 155 (845)
-.|+|++.. |+.+..+....+.+-.+.|+.+. .|++...+|++++|++- |..+... ......|..+.+..+|-
T Consensus 64 ~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~-ge~ie~~svg~e~~~~~I~ec~~f~~GV 140 (829)
T KOG2280|consen 64 PYIRIFNIS-GQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLL-GEFIESNSVGFESQMSDIVECRFFHNGV 140 (829)
T ss_pred eeEEEEecc-ccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecc-hhhhcccccccccccCceeEEEEecCce
Confidence 457888875 66666655444578899999765 56677889999999985 3333331 22233455555555554
Q ss_pred EEEEEeCCCcEEE
Q psy467 156 WIASGGEDGVVRI 168 (845)
Q Consensus 156 ~Lasgs~DG~I~I 168 (845)
.+. ..+|.+.+
T Consensus 141 avl--t~~g~v~~ 151 (829)
T KOG2280|consen 141 AVL--TVSGQVIL 151 (829)
T ss_pred EEE--ecCCcEEE
Confidence 333 34455555
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=89.34 E-value=10 Score=45.83 Aligned_cols=107 Identities=12% Similarity=0.217 Sum_probs=70.3
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc-CCCCCeEEEEEc--cCCCEEEEEECCCeEEEEECC------
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN-GHKSSITSVDFH--PYGDYLCSGSLDSFIKLWDLR------ 130 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~-~h~~~V~~lafs--pdg~~Lasgs~DG~I~IWDl~------ 130 (845)
...-+.-+.-++.-++-+....+.|||...+.....-. ...+.|.+++|. |+++.+++.|....|.+|--.
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~ 110 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN 110 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence 34444444444444444445679999999876443322 356789999986 588899999999999998542
Q ss_pred ---CCceEEEE--cCCC-CCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 131 ---RKGCIYTY--RGHS-KSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 131 ---t~~~l~~~--~~h~-~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+...++.+ ..++ .+|.+..|.++|.+++.++ +.+.+
T Consensus 111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv 152 (631)
T PF12234_consen 111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFV 152 (631)
T ss_pred CCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEE
Confidence 11233333 2333 5789999999987665544 46777
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=89.20 E-value=9.6 Score=46.01 Aligned_cols=116 Identities=9% Similarity=0.144 Sum_probs=74.1
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-CCCCCeEEEEEc--CCCCEEEEEECCCcEEEEEC
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFG--NGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafS--pdg~~LaSgs~DGtV~VWDl 87 (845)
+...-....-+.-|. .+...++-+....+.|||...+.....-. ...+.|.++.|. |+++.+++.+-.+.|.++.-
T Consensus 25 ~~T~i~~~~li~gss-~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q 103 (631)
T PF12234_consen 25 FETGISNPSLISGSS-IKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ 103 (631)
T ss_pred EecCCCCcceEeecc-cCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence 333333444444444 44444444445579999998876443322 357889999996 58888888889999999854
Q ss_pred C---------CCcEEEEE--cCCC-CCeEEEEEccCCCEEEEEECCCeEEEEEC
Q psy467 88 A---------VPTVQRTL--NGHK-SSITSVDFHPYGDYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 88 ~---------tg~~v~~l--~~h~-~~V~~lafspdg~~Lasgs~DG~I~IWDl 129 (845)
. +...++.+ ..++ .+|.+..|.++|..++.+ ++.+.|+|-
T Consensus 104 ~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk 155 (631)
T PF12234_consen 104 LRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK 155 (631)
T ss_pred cchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence 2 11233333 2333 578999999999655544 356888764
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=89.16 E-value=48 Score=38.18 Aligned_cols=103 Identities=13% Similarity=0.198 Sum_probs=72.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE----EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC-C
Q psy467 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ----RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR-R 131 (845)
Q Consensus 57 h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v----~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~-t 131 (845)
..++|.++.||+|.+.||+--.+.+|.+++....+.. .+-+.....|....|+.+ .-+|..+..| +-+|-+. .
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pe 142 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPE 142 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchh
Confidence 4669999999999999999999999999998433222 122233455888999866 4566655555 5556543 2
Q ss_pred CceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 132 ~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
.+.++..+.+...|.-..|.++.+.++.++
T Consensus 143 krslRlVks~~~nvnWy~yc~et~v~LL~t 172 (657)
T KOG2377|consen 143 KRSLRLVKSHNLNVNWYMYCPETAVILLST 172 (657)
T ss_pred hhhhhhhhhcccCccEEEEccccceEeeec
Confidence 344556667788888899999887654443
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=88.78 E-value=13 Score=45.00 Aligned_cols=85 Identities=12% Similarity=0.216 Sum_probs=52.2
Q ss_pred CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE----cCCCCCeEEEEEccCCC
Q psy467 38 KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL----NGHKSSITSVDFHPYGD 113 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l----~~h~~~V~~lafspdg~ 113 (845)
-.|+|++. +|..+.++......+..+.|+.+.. |++...+|++.++++- |..+... ......|..+.|..+|
T Consensus 64 ~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~-ge~ie~~svg~e~~~~~I~ec~~f~~G- 139 (829)
T KOG2280|consen 64 PYIRIFNI-SGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLL-GEFIESNSVGFESQMSDIVECRFFHNG- 139 (829)
T ss_pred eeEEEEec-cccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecc-hhhhcccccccccccCceeEEEEecCc-
Confidence 35888886 4666665554455888999997765 5556699999999986 3333331 2223345556666566
Q ss_pred EEEEEECCCeEEEE
Q psy467 114 YLCSGSLDSFIKLW 127 (845)
Q Consensus 114 ~Lasgs~DG~I~IW 127 (845)
+++-..+|.+.+-
T Consensus 140 -Vavlt~~g~v~~i 152 (829)
T KOG2280|consen 140 -VAVLTVSGQVILI 152 (829)
T ss_pred -eEEEecCCcEEEE
Confidence 3333344554443
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=87.68 E-value=17 Score=41.16 Aligned_cols=101 Identities=21% Similarity=0.222 Sum_probs=57.2
Q ss_pred CCeEEEEEcCCCCEEEEEE-----------CCC-cEEEEECCC--Cc--EEEEEcCCCCCeEEEEEccCCCEEEEEECCC
Q psy467 59 TPVESVQFGNGEETLSAGC-----------QSG-SIKIWNLAV--PT--VQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs-----------~DG-tV~VWDl~t--g~--~v~~l~~h~~~V~~lafspdg~~Lasgs~DG 122 (845)
.....|+|.++|+.+++-. ..+ .|.+++-.+ |+ ....+.......+.+++.+++ |++++...
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~~ 91 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPPD 91 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCCe
Confidence 4567889999998777653 223 677776543 22 233443333456789999888 44444444
Q ss_pred eEEEEECCCC-----c--eE-EEEcC----CCCCeEEEEEecCCCEEEEEe
Q psy467 123 FIKLWDLRRK-----G--CI-YTYRG----HSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 123 ~I~IWDl~t~-----~--~l-~~~~~----h~~~V~sLafSPdg~~Lasgs 161 (845)
..++.|.... + .+ ..+.. +......++|.|||.+.++.+
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 3334454311 1 12 12222 134477899999988766554
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=87.00 E-value=10 Score=45.03 Aligned_cols=105 Identities=13% Similarity=0.098 Sum_probs=51.5
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCeeEE--EecCCCCCeEEEEEcCCCCEEEEEECC------CcEEEEECCCCcEE
Q psy467 27 SGQVLATGGDD-----KKVNLWALGKSNCIM--SLSGHSTPVESVQFGNGEETLSAGCQS------GSIKIWNLAVPTVQ 93 (845)
Q Consensus 27 dg~~LaTgs~D-----G~I~IWdl~t~~~i~--~l~~h~~~V~sLafSpdg~~LaSgs~D------GtV~VWDl~tg~~v 93 (845)
++.+++.||.+ ..+..||..+.+-.. .+...... .+++ .-++...+.|+.+ ..+..||..+++-.
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~-~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~ 419 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN-PCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWS 419 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCcc-ceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeee
Confidence 56777778765 246778876543211 11111111 1122 2256666666632 45888998876433
Q ss_pred EEEcCCCC-CeEEEEEccCCCEEEEEECC--------CeEEEEECCCCce
Q psy467 94 RTLNGHKS-SITSVDFHPYGDYLCSGSLD--------SFIKLWDLRRKGC 134 (845)
Q Consensus 94 ~~l~~h~~-~V~~lafspdg~~Lasgs~D--------G~I~IWDl~t~~~ 134 (845)
..-..... .-.++. ..++..++.|+.+ ..+.+||..+++-
T Consensus 420 ~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 468 (534)
T PHA03098 420 KGSPLPISHYGGCAI-YHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKW 468 (534)
T ss_pred ecCCCCccccCceEE-EECCEEEEECCccCCCCCcccceEEEecCCCCce
Confidence 21110111 111222 2345566666543 2378888876543
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=86.68 E-value=2.3 Score=32.73 Aligned_cols=32 Identities=19% Similarity=0.370 Sum_probs=28.1
Q ss_pred CcEEEEEEecCCC--CEEEEEeCCCeEEEEECCC
Q psy467 16 ASVNCLALGKKSG--QVLATGGDDKKVNLWALGK 47 (845)
Q Consensus 16 ~~V~~LafSp~dg--~~LaTgs~DG~I~IWdl~t 47 (845)
++|.++.|||..+ ++|+.+...|.|.|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 5799999998666 7999999999999999874
|
It contains a characteristic DLL sequence motif. |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=86.64 E-value=5.6 Score=49.92 Aligned_cols=143 Identities=13% Similarity=0.093 Sum_probs=87.4
Q ss_pred CCeEEEEEcCCCCEEEEEEC--CCcEEEEECCCCcEEE-----EEcC------CCCCeEEEEEccCC-CEEEEEECCCeE
Q psy467 59 TPVESVQFGNGEETLSAGCQ--SGSIKIWNLAVPTVQR-----TLNG------HKSSITSVDFHPYG-DYLCSGSLDSFI 124 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~--DGtV~VWDl~tg~~v~-----~l~~------h~~~V~~lafspdg-~~Lasgs~DG~I 124 (845)
-+|..+...+|+...++... +-.|..+|+++...-. -+.. ......++.|+|.= ...++...|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 35666666777766554433 3478899987532111 1111 12335678888853 245667788889
Q ss_pred EEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC--ccCCCCC---CCCCc
Q psy467 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV--HPLGTPP---PQYTS 199 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg--~~l~~~~---~~~i~ 199 (845)
.+..+........--......+|++|+|.|+.+++|-..|++.- |...-. ..+..++ ...+.
T Consensus 181 ~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQ-------------y~P~leik~~ip~Pp~~e~yrvl 247 (1405)
T KOG3630|consen 181 RVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQ-------------YEPSLEIKSEIPEPPVEENYRVL 247 (1405)
T ss_pred hhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEE-------------eecccceeecccCCCcCCCccee
Confidence 88877543222221234567899999999999999999999888 544322 2222222 35566
Q ss_pred ceeecCCCCeEEEEe
Q psy467 200 SVPFSHNTSLRKSFT 214 (845)
Q Consensus 200 svs~spdg~~l~~~~ 214 (845)
+++|-.....+..+.
T Consensus 248 ~v~Wl~t~eflvvy~ 262 (1405)
T KOG3630|consen 248 SVTWLSTQEFLVVYG 262 (1405)
T ss_pred EEEEecceeEEEEec
Confidence 777766666555543
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=86.49 E-value=31 Score=40.66 Aligned_cols=104 Identities=9% Similarity=-0.048 Sum_probs=51.8
Q ss_pred CCCEEEEEeCCC-----eEEEEECCCCeeEE--EecCCCCCeEEEEEcCCCCEEEEEECC--CcEEEEECCCCcEEEEEc
Q psy467 27 SGQVLATGGDDK-----KVNLWALGKSNCIM--SLSGHSTPVESVQFGNGEETLSAGCQS--GSIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 27 dg~~LaTgs~DG-----~I~IWdl~t~~~i~--~l~~h~~~V~sLafSpdg~~LaSgs~D--GtV~VWDl~tg~~v~~l~ 97 (845)
++.++++||.++ .+..||..+.+-.. .+........ ++ .-++...+.|+.+ ..+..||..+++-.. +.
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~-~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~-~~ 347 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYAS-GV-PANNKLYVVGGLPNPTSVERWFHGDAAWVN-MP 347 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcce-EE-EECCEEEEECCcCCCCceEEEECCCCeEEE-CC
Confidence 456667777543 46678876644222 1211111111 22 2356666777653 457888877654322 22
Q ss_pred CCCCCe-EEEEEccCCCEEEEEECCC---eEEEEECCCCc
Q psy467 98 GHKSSI-TSVDFHPYGDYLCSGSLDS---FIKLWDLRRKG 133 (845)
Q Consensus 98 ~h~~~V-~~lafspdg~~Lasgs~DG---~I~IWDl~t~~ 133 (845)
.-..+. ......-+|+..+.|+.++ .+..||.++.+
T Consensus 348 ~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~ 387 (480)
T PHA02790 348 SLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQ 387 (480)
T ss_pred CCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCE
Confidence 111111 1111223566667777553 46677776543
|
|
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=86.46 E-value=20 Score=37.30 Aligned_cols=97 Identities=7% Similarity=0.025 Sum_probs=57.5
Q ss_pred CCCEEEEEEC--CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEE-EECCCeEEEEECCCCceEEEEcCCCCCe
Q psy467 69 GEETLSAGCQ--SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCS-GSLDSFIKLWDLRRKGCIYTYRGHSKSI 145 (845)
Q Consensus 69 dg~~LaSgs~--DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Las-gs~DG~I~IWDl~t~~~l~~~~~h~~~V 145 (845)
+|.++.+.+. ...|++||+.+|+.+.+-+-....+..=-...-++++.. .-.+|.-..+|.++.+++..+. ..+.=
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~-y~GeG 133 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS-YEGEG 133 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc-cCCcc
Confidence 4556666555 356999999999887665422222222111222344433 3467888899998888877765 44555
Q ss_pred EEEEEecCCCEEEEEeCCCcEEE
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+.++-. +.-|+.++...+++.
T Consensus 134 WgLt~d--~~~LimsdGsatL~f 154 (262)
T COG3823 134 WGLTSD--DKNLIMSDGSATLQF 154 (262)
T ss_pred eeeecC--CcceEeeCCceEEEe
Confidence 666544 555666655555655
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=86.31 E-value=35 Score=42.30 Aligned_cols=92 Identities=18% Similarity=0.238 Sum_probs=50.9
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECC-CCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALG-KSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~-t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~ 94 (845)
-.|..+.++| +|.+||..|..|.. |-.+. .......+.+-...|.|=.+.=+..+ .
T Consensus 85 f~v~~i~~n~-~g~~lal~G~~~v~-V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~---------------------~ 141 (717)
T PF10168_consen 85 FEVHQISLNP-TGSLLALVGPRGVV-VLELPRRWGKNGEFEDGKKEINCRTVPVDERF---------------------F 141 (717)
T ss_pred eeEEEEEECC-CCCEEEEEcCCcEE-EEEeccccCccccccCCCcceeEEEEEechhh---------------------c
Confidence 3688888888 88888888876543 33332 11111112222222322222111111 1
Q ss_pred EEcCCCCCeEEEEEccC---CCEEEEEECCCeEEEEECCC
Q psy467 95 TLNGHKSSITSVDFHPY---GDYLCSGSLDSFIKLWDLRR 131 (845)
Q Consensus 95 ~l~~h~~~V~~lafspd---g~~Lasgs~DG~I~IWDl~t 131 (845)
...+...|..+.|+|. +..|++-+.|+++++||+..
T Consensus 142 -~~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 142 -TSNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred -cCCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCC
Confidence 1123446778888885 47888888888999998864
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=86.01 E-value=10 Score=43.89 Aligned_cols=58 Identities=10% Similarity=0.118 Sum_probs=47.3
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEec
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~ 351 (845)
++|+++..|.|++||--...-...+.+....|..+..+.+|++|++.+...+.+-|+.
T Consensus 575 yIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yllL~d~~ 632 (776)
T COG5167 575 YIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNYLLLTDVP 632 (776)
T ss_pred eEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecceEEEEecc
Confidence 8999999999999996544444456666778999999999999998888777777754
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=85.82 E-value=49 Score=41.02 Aligned_cols=26 Identities=31% Similarity=0.534 Sum_probs=21.1
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 143 KSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 143 ~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
-.|..+.++|+|.+++..|..|.+.+
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~ 110 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVL 110 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEE
Confidence 46888999999999999988765544
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=85.70 E-value=62 Score=35.68 Aligned_cols=113 Identities=12% Similarity=0.227 Sum_probs=66.6
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECC------CC-eeEEEecC-----CCCCeEEEEEcCCCCE------------
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALG------KS-NCIMSLSG-----HSTPVESVQFGNGEET------------ 72 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~------t~-~~i~~l~~-----h~~~V~sLafSpdg~~------------ 72 (845)
.-+.|+++| .+.+.++....+...+||.. .. ..+.++.. .....+.+.|+....+
T Consensus 24 N~WGia~~p-~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~ 102 (336)
T TIGR03118 24 NAWGLSYRP-GGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR 102 (336)
T ss_pred ccceeEecC-CCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence 457899999 77777777777899999985 12 22333332 2346788888754333
Q ss_pred EEEEECCCcEEEEECCCCcE-----EEEEcC-CCCCe-EEEEEcc--CCCEEEEEE-CCCeEEEEECC
Q psy467 73 LSAGCQSGSIKIWNLAVPTV-----QRTLNG-HKSSI-TSVDFHP--YGDYLCSGS-LDSFIKLWDLR 130 (845)
Q Consensus 73 LaSgs~DGtV~VWDl~tg~~-----v~~l~~-h~~~V-~~lafsp--dg~~Lasgs-~DG~I~IWDl~ 130 (845)
++.++.||+|.-|...-+.. ...+.. ..+.| ..+++.. .+.+|+.+. ..++|-++|-.
T Consensus 103 Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~ 170 (336)
T TIGR03118 103 FLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGS 170 (336)
T ss_pred EEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCc
Confidence 56677899999998643221 122221 11222 2344443 345555543 56778888743
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2 | Back alignment and domain information |
|---|
Probab=85.58 E-value=62 Score=35.62 Aligned_cols=58 Identities=12% Similarity=0.072 Sum_probs=39.9
Q ss_pred CCEEEEEeCCCeEEEEECCC--CeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECC
Q psy467 28 GQVLATGGDDKKVNLWALGK--SNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLA 88 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t--~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~ 88 (845)
+++|+.|+++|...+. +.. .+..+.+ +...|+++...+..+.|++-+ ....++++++.
T Consensus 13 ~~~lL~GTe~Gly~~~-~~~~~~~~~kl~--~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~ 73 (302)
T smart00036 13 GKWLLVGTEEGLYVLN-ISDQPGTLEKLI--GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLS 73 (302)
T ss_pred CcEEEEEeCCceEEEE-cccCCCCeEEec--CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHH
Confidence 3689999999855444 543 2333333 466899999998877776654 33459999984
|
Unpublished observations. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=85.30 E-value=25 Score=34.02 Aligned_cols=98 Identities=16% Similarity=0.127 Sum_probs=66.8
Q ss_pred EEEEEeCCCeEEEEECCCC--------eEEEEecCCCCCEEEEEEeC-----CCCEEEEEeCCCEEEEEecCCceEEEec
Q psy467 294 LTTSSSADRTVNFWDLEKF--------SLVSTTEKNSSTIRRLTFSE-----GGECLLGGDTEGLKVYGWEPARQYDAQP 360 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~--------~~l~tl~gh~~~VtslafSp-----dG~~Lasgs~DGI~IWDl~tgk~l~tl~ 360 (845)
.|++++.-|+|.|++.... ..+..+. -...|++++-.+ +...|+.|+...+..||++...-+..-.
T Consensus 12 cL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d~Fyke 90 (136)
T PF14781_consen 12 CLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSDLFYKE 90 (136)
T ss_pred eEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCchhhhhh
Confidence 6888888999999987643 2333443 245677776544 4668999999889999998875443222
Q ss_pred CCCCCeEEEEEc-----CCceEEEE--EEEEeeCCCCCcc
Q psy467 361 MGWGKVQDLAVT-----GTQLWFRR--VGTWSHQDSGFST 393 (845)
Q Consensus 361 ~h~~~VtsVafS-----dg~lLaaS--VsiW~~d~~~~~~ 393 (845)
-.+.|+++.+- +..++.++ .++|..|...-+.
T Consensus 91 -~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~ 129 (136)
T PF14781_consen 91 -VPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEI 129 (136)
T ss_pred -CccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEE
Confidence 23677777774 56677776 7888777665443
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=85.08 E-value=69 Score=35.72 Aligned_cols=103 Identities=20% Similarity=0.277 Sum_probs=57.9
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE---EEEE----cCCCCCeEEEEEccC---CCEEEEEEC-C-------
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV---QRTL----NGHKSSITSVDFHPY---GDYLCSGSL-D------- 121 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~---v~~l----~~h~~~V~~lafspd---g~~Lasgs~-D------- 121 (845)
..+.|+|.|||+.+++ ...|.|++++ ..+.. +..+ .........++++|+ +.+|++... .
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 4578999999987775 4699999999 44443 3333 123456789999994 344444332 1
Q ss_pred -CeEEEEECCCC-------ceE-EEEcC---CCCCeEEEEEecCCCEEEEEeCCC
Q psy467 122 -SFIKLWDLRRK-------GCI-YTYRG---HSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 122 -G~I~IWDl~t~-------~~l-~~~~~---h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
..|.-|....+ +.+ ..+.. ....-..|+|.|||.+.++.+..+
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~ 135 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG 135 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence 23444544333 111 12121 233456799999997666665544
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.36 E-value=76 Score=34.80 Aligned_cols=113 Identities=19% Similarity=0.222 Sum_probs=74.6
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC--CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc--
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG--HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG-- 133 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~--h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~-- 133 (845)
.+-+..+.++ +++...+..+.-++|.|+.+...-..+.. ..+-..++.. .|++..++..|.-+.+.|+.+..
T Consensus 86 ~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP 161 (370)
T COG5276 86 RDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSP 161 (370)
T ss_pred hhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCc
Confidence 4456666676 46777777888899999987643332221 1133344444 58899998867667888886543
Q ss_pred -eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 134 -CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 134 -~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
....+......-+.++.| |++-..+..|+-+.+ -|+.....
T Consensus 162 ~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~i-------------vDVSnp~s 203 (370)
T COG5276 162 QLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTI-------------VDVSNPHS 203 (370)
T ss_pred eeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEE-------------EEccCCCC
Confidence 334444445555677777 788888888888888 88876543
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=82.90 E-value=30 Score=42.44 Aligned_cols=139 Identities=14% Similarity=0.161 Sum_probs=87.0
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEE------Eec----------------CCCCCeEEEEEcC--CCCEEEEEECCCcEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIM------SLS----------------GHSTPVESVQFGN--GEETLSAGCQSGSIK 83 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~------~l~----------------~h~~~V~sLafSp--dg~~LaSgs~DGtV~ 83 (845)
++++++|. .+.|.||+........ .+. .....|+.|.... +...|+.+.+||.|.
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~ 127 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL 127 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence 56777765 5699999975322211 110 0122355555443 456788999999999
Q ss_pred EEECCC-------C----c---------EEEEEcCCCCCeEEEEEc--cCCCEEEEEECCCeEEEEECCCC--ce-EEEE
Q psy467 84 IWNLAV-------P----T---------VQRTLNGHKSSITSVDFH--PYGDYLCSGSLDSFIKLWDLRRK--GC-IYTY 138 (845)
Q Consensus 84 VWDl~t-------g----~---------~v~~l~~h~~~V~~lafs--pdg~~Lasgs~DG~I~IWDl~t~--~~-l~~~ 138 (845)
+|.+++ . + +...+. ....++.++++ ...++||+++....|.||-.... +. ...-
T Consensus 128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s 206 (717)
T PF08728_consen 128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPS 206 (717)
T ss_pred EEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccc
Confidence 997631 0 0 111222 34578999998 77788898888888888755321 11 1111
Q ss_pred cCCCCCeEEEEEecCC---C---EEEEEeCCCcEEE
Q psy467 139 RGHSKSINSIRFSPDG---Q---WIASGGEDGVVRI 168 (845)
Q Consensus 139 ~~h~~~V~sLafSPdg---~---~Lasgs~DG~I~I 168 (845)
..+...|-+|+|-++. . ++++++-.|.+.+
T Consensus 207 ~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~ 242 (717)
T PF08728_consen 207 HQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWT 242 (717)
T ss_pred cccccCCCeeEeecCCCCCccceEEEEEeccCcEEE
Confidence 1255678899997743 2 7888888999988
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=82.34 E-value=89 Score=35.98 Aligned_cols=151 Identities=11% Similarity=0.079 Sum_probs=0.0
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc---
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT--- 91 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~--- 91 (845)
.+....+..++ +|.+++.+..-..++-|+-....-...-......+..+.|.+++..++++ .+--.+|....++
T Consensus 238 ~Gsf~~v~~~~-dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g--~~G~l~~S~d~G~~~~ 314 (398)
T PLN00033 238 TGTFSTVNRSP-DGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT--RGGGLYVSKGTGLTEE 314 (398)
T ss_pred ccceeeEEEcC-CCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe--CCceEEEecCCCCccc
Q ss_pred --EEEEEcCCCCC--eEEEEEccCCCEEEEEECCCeEEEEEC-CCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 92 --VQRTLNGHKSS--ITSVDFHPYGDYLCSGSLDSFIKLWDL-RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 92 --~v~~l~~h~~~--V~~lafspdg~~Lasgs~DG~I~IWDl-~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
........... +..+.|.+++..+++|...-.++--|- .+.+....-..-...+..+.|.++++.+++| .+|.|
T Consensus 315 ~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~i 393 (398)
T PLN00033 315 DFDFEEADIKSRGFGILDVGYRSKKEAWAAGGSGILLRSTDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVL 393 (398)
T ss_pred ccceeecccCCCCcceEEEEEcCCCcEEEEECCCcEEEeCCCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEE
Q ss_pred EEeeeeccCCceeEEE
Q psy467 167 RIGASFHLTNTSIHVV 182 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vW 182 (845)
.- |
T Consensus 394 l~-------------~ 396 (398)
T PLN00033 394 LR-------------Y 396 (398)
T ss_pred EE-------------e
|
|
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=82.02 E-value=79 Score=35.14 Aligned_cols=143 Identities=13% Similarity=0.190 Sum_probs=83.1
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCe------EEEEECCC--C--eeE-----EEecCCC--------CCeEEEEEcCCCC
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKK------VNLWALGK--S--NCI-----MSLSGHS--------TPVESVQFGNGEE 71 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~------I~IWdl~t--~--~~i-----~~l~~h~--------~~V~sLafSpdg~ 71 (845)
-+.+..|.+.+ ++..+++.+.+|. +..+++.. + ..+ ..+.... ....+|++.+++.
T Consensus 19 ~GGlSgl~~~~-~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~ 97 (326)
T PF13449_consen 19 FGGLSGLDYDP-DDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS 97 (326)
T ss_pred cCcEeeEEEeC-CCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence 36789999997 4445555566666 55555432 1 111 1111111 1455888877888
Q ss_pred EEEEEECC------CcEEEEECCCCcEEEEEc---------------CCCCCeEEEEEccCCCEEEEEEC-----CC--e
Q psy467 72 TLSAGCQS------GSIKIWNLAVPTVQRTLN---------------GHKSSITSVDFHPYGDYLCSGSL-----DS--F 123 (845)
Q Consensus 72 ~LaSgs~D------GtV~VWDl~tg~~v~~l~---------------~h~~~V~~lafspdg~~Lasgs~-----DG--~ 123 (845)
++++.-.+ ..|..++.. |+....+. .......+++++|+|+.|+++.. |+ .
T Consensus 98 ~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~ 176 (326)
T PF13449_consen 98 FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRA 176 (326)
T ss_pred EEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccc
Confidence 87776556 778888876 66554441 12345789999999997766542 22 1
Q ss_pred -------EEE--EECCC-CceE----EEEcC-----CCCCeEEEEEecCCCEEEE
Q psy467 124 -------IKL--WDLRR-KGCI----YTYRG-----HSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 124 -------I~I--WDl~t-~~~l----~~~~~-----h~~~V~sLafSPdg~~Las 159 (845)
+++ ||..+ +... ..+.. ....+..+.+-+++++|+.
T Consensus 177 ~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 177 NPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred ccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 444 45443 2222 22221 3456778888888775543
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=81.76 E-value=94 Score=34.74 Aligned_cols=85 Identities=14% Similarity=0.166 Sum_probs=48.2
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecC----CCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecC---CCCCe
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEK----NSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPM---GWGKV 366 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~g----h~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~---h~~~V 366 (845)
++++| ..|.+++=..+.+........ ....+.++.+.+++..++++ .+|..+...+.++....... -....
T Consensus 228 ~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~~S~d~G~tW~~~~~~~~~~~~~ 305 (334)
T PRK13684 228 LWMLA-RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLLVSKDGGKTWEKDPVGEEVPSNF 305 (334)
T ss_pred EEEEe-cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEEEc-CCCeEEEeCCCCCCCeECCcCCCCCcce
Confidence 55554 456664323444433222111 12357889999988766555 55644456666666555432 22457
Q ss_pred EEEEEc-CCceEEEE
Q psy467 367 QDLAVT-GTQLWFRR 380 (845)
Q Consensus 367 tsVafS-dg~lLaaS 380 (845)
..+.|. +++.++++
T Consensus 306 ~~~~~~~~~~~~~~G 320 (334)
T PRK13684 306 YKIVFLDPEKGFVLG 320 (334)
T ss_pred EEEEEeCCCceEEEC
Confidence 788877 77777766
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=81.39 E-value=0.22 Score=56.66 Aligned_cols=147 Identities=14% Similarity=0.170 Sum_probs=99.8
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE-EECCCcEEEEECCCCcEEEEE
Q psy467 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA-GCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS-gs~DGtV~VWDl~tg~~v~~l 96 (845)
-....|-+.+++ ++.++.+..+..||-. ++...... .+.....++|..++..++. +-..+.+.+||+.+......-
T Consensus 37 pi~~~w~~e~~n-lavaca~tiv~~YD~a-gq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE 113 (615)
T KOG2247|consen 37 PIIHRWRPEGHN-LAVACANTIVIYYDKA-GQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLE 113 (615)
T ss_pred cceeeEecCCCc-eehhhhhhHHHhhhhh-cceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHh
Confidence 334566674445 8888888888889853 44444343 3455677889888876554 446789999999864221111
Q ss_pred cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 97 ~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.+....-.-+.|++....++.+...|.+.+++..+.+.+...-.|...+.+++|.+.+. .+.++.|..+.+
T Consensus 114 ~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dcd~~L~v 184 (615)
T KOG2247|consen 114 SGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDCDNTLSV 184 (615)
T ss_pred ccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCcHHHHHH
Confidence 11122222378999889999999999999999987776666655888999999998664 555555555544
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=81.12 E-value=1.1e+02 Score=35.32 Aligned_cols=139 Identities=9% Similarity=0.225 Sum_probs=86.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCe-----eEEEecCCCCCeEEEEEcC-----CCCEEEEEECCCcEEEEECCC-------
Q psy467 27 SGQVLATGGDDKKVNLWALGKSN-----CIMSLSGHSTPVESVQFGN-----GEETLSAGCQSGSIKIWNLAV------- 89 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~-----~i~~l~~h~~~V~sLafSp-----dg~~LaSgs~DGtV~VWDl~t------- 89 (845)
+.+.+++|+..|.++||+..... .+.. ..-..+|..++.-. +...||+ -.-..+.||.+..
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE-~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~ 113 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLE-TQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEH 113 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEE-EecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCccc
Confidence 55799999999999999985433 2222 22457888887642 2234554 4677888887721
Q ss_pred Cc--EEEEEcCCC--CCeEEEEEccC-----CCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 90 PT--VQRTLNGHK--SSITSVDFHPY-----GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 90 g~--~v~~l~~h~--~~V~~lafspd-----g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
+. .+..+..|. .....+++-|- ..++++-+.||.+.+++-+.-.....+.. ---.-.+.|.+....|+++
T Consensus 114 g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~ 192 (418)
T PF14727_consen 114 GNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTA 192 (418)
T ss_pred CcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEe
Confidence 11 111121122 22334444332 25788899999999999765443333332 3334567888888889999
Q ss_pred eCCCcEEE
Q psy467 161 GEDGVVRI 168 (845)
Q Consensus 161 s~DG~I~I 168 (845)
+.+..+..
T Consensus 193 sss~~l~~ 200 (418)
T PF14727_consen 193 SSSWTLEC 200 (418)
T ss_pred cCceeEEE
Confidence 88877777
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=80.86 E-value=1.5 Score=53.40 Aligned_cols=95 Identities=13% Similarity=0.190 Sum_probs=55.2
Q ss_pred CcEEEEEEecC--CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE
Q psy467 16 ASVNCLALGKK--SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 16 ~~V~~LafSp~--dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
..+.-+.|+|- +.-++..+..++.|++.++..... ..+.+|...+..++|-..|-.++.+
T Consensus 181 s~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~----------------- 242 (1283)
T KOG1916|consen 181 SDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLAS----------------- 242 (1283)
T ss_pred CCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhhee-----------------
Confidence 34455555541 445566666777777766543322 3345587777777765443222111
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEEC-----CCCceEEEEcCCC
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL-----RRKGCIYTYRGHS 142 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl-----~t~~~l~~~~~h~ 142 (845)
.+|||+.|++++.||.++.|.+ ....|++.++.|.
T Consensus 243 --------------lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd 282 (1283)
T KOG1916|consen 243 --------------LSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHD 282 (1283)
T ss_pred --------------eCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCC
Confidence 6777777777777777766654 2334555666665
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.29 E-value=27 Score=40.09 Aligned_cols=61 Identities=15% Similarity=0.063 Sum_probs=39.4
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCce
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQ 355 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~ 355 (845)
-+++-+.+|++.++.....+.+-. ..--..+..+++||++.+|++-...+++++.+++...
T Consensus 330 gF~~l~~~G~L~~f~st~~~~lL~-~~~~~~~~~~~~Sp~~~~Ll~e~~gki~~~~l~Nr~P 390 (733)
T COG4590 330 GFYSLYRNGTLQSFYSTSEKLLLF-ERAYQAPQLVAMSPNQAYLLSEDQGKIRLAQLENRNP 390 (733)
T ss_pred eEEEEcCCCceeeeecccCcceeh-hhhhcCcceeeeCcccchheeecCCceEEEEecCCCC
Confidence 455555666666665444333221 1112356788999999999987777799999887543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 845 | ||||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 1e-21 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 5e-17 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 1e-08 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 5e-17 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 7e-07 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 5e-17 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 7e-07 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 2e-16 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 2e-04 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 2e-16 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 8e-07 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 2e-16 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 2e-04 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 2e-16 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 1e-06 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 3e-16 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 3e-04 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 3e-16 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 3e-04 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 3e-16 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 3e-04 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 3e-16 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 3e-04 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 3e-16 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 3e-04 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 3e-16 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 3e-04 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 3e-16 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 3e-04 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 3e-16 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 3e-04 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 3e-16 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 3e-04 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 4e-16 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 2e-04 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 4e-16 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 3e-04 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 4e-16 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 2e-04 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 4e-16 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 4e-04 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 4e-16 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 3e-04 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 6e-16 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 7e-04 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 6e-16 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 7e-16 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 2e-15 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 3e-14 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 4e-14 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 2e-13 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 5e-12 | ||
| 3izb_a | 319 | Localization Of The Small Subunit Ribosomal Protein | 1e-12 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 1e-12 | ||
| 1trj_A | 314 | Homology Model Of Yeast Rack1 Protein Fitted Into 1 | 1e-12 | ||
| 3jyv_R | 313 | Structure Of The 40s Rrna And Proteins And PE TRNA | 1e-12 | ||
| 3rfg_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 1e-12 | ||
| 3rfh_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 2e-12 | ||
| 3frx_A | 319 | Crystal Structure Of The Yeast Orthologue Of Rack1, | 2e-12 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 3e-12 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 3e-12 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 2e-11 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 7e-11 | ||
| 3iz6_a | 380 | Localization Of The Small Subunit Ribosomal Protein | 7e-11 | ||
| 3iz6_a | 380 | Localization Of The Small Subunit Ribosomal Protein | 2e-04 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 8e-11 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 1e-10 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 1e-10 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 1e-10 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 2e-10 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 2e-10 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 2e-10 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 9e-05 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 4e-10 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 1e-09 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 2e-09 | ||
| 4gga_A | 420 | Structural Analysis Of Human Cdc20 Supports Multi-S | 7e-09 | ||
| 4ggd_A | 431 | Structural Analysis Of Human Cdc20 Supports Multisi | 7e-09 | ||
| 3zwl_B | 369 | Structure Of Eukaryotic Translation Initiation Fact | 2e-08 | ||
| 1gxr_A | 337 | Wd40 Region Of Human Groucho/tle1 Length = 337 | 3e-08 | ||
| 4ggc_A | 318 | Structural Analysis Of Human Cdc20 Supports Multi-S | 3e-08 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 8e-08 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 8e-08 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 8e-08 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 9e-08 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 2e-07 | ||
| 4aez_A | 401 | Crystal Structure Of Mitotic Checkpoint Complex Len | 1e-06 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 1e-06 | ||
| 4a11_B | 408 | Structure Of The Hsddb1-Hscsa Complex Length = 408 | 2e-06 | ||
| 2hes_X | 330 | Cytosolic Iron-sulphur Assembly Protein- 1 Length = | 5e-06 | ||
| 1r5m_A | 425 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-05 | ||
| 3acp_A | 417 | Crystal Structure Of Yeast Rpn14, A Chaperone Of Th | 4e-05 | ||
| 3vl1_A | 420 | Crystal Structure Of Yeast Rpn14 Length = 420 | 5e-05 | ||
| 4e5z_B | 436 | Damaged Dna Induced Uv-Damaged Dna-Binding Protein | 2e-04 | ||
| 4e54_B | 435 | Damaged Dna Induced Uv-Damaged Dna-Binding Protein | 2e-04 | ||
| 3ei4_B | 436 | Structure Of The Hsddb1-Hsddb2 Complex Length = 436 | 2e-04 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 3e-04 | ||
| 4g56_B | 357 | Crystal Structure Of Full Length Prmt5/mep50 Comple | 8e-04 | ||
| 4a08_B | 382 | Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Dup | 9e-04 |
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314 | Back alignment and structure |
|
| >pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313 | Back alignment and structure |
|
| >pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319 | Back alignment and structure |
|
| >pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319 | Back alignment and structure |
|
| >pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380 | Back alignment and structure |
|
| >pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420 | Back alignment and structure |
|
| >pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431 | Back alignment and structure |
|
| >pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369 | Back alignment and structure |
|
| >pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337 | Back alignment and structure |
|
| >pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408 | Back alignment and structure |
|
| >pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330 | Back alignment and structure |
|
| >pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425 | Back alignment and structure |
|
| >pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s Reg Particle Of The Proteasome Length = 417 | Back alignment and structure |
|
| >pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14 Length = 420 | Back alignment and structure |
|
| >pdb|4E5Z|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna Repair Length = 436 | Back alignment and structure |
|
| >pdb|4E54|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna Repair Length = 435 | Back alignment and structure |
|
| >pdb|3EI4|B Chain B, Structure Of The Hsddb1-Hsddb2 Complex Length = 436 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|4G56|B Chain B, Crystal Structure Of Full Length Prmt5/mep50 Complexes From Xenopus Laevis Length = 357 | Back alignment and structure |
|
| >pdb|4A08|B Chain B, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex ( Purine At D-1 Position) At 3.0 A Resolution (Cpd 1) Length = 382 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 845 | |||
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.98 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.98 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.98 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.98 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.98 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.98 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.98 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.98 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.97 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.97 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.97 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.97 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.97 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.97 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.97 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.97 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.97 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.97 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.97 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.97 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.97 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.97 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.97 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.97 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.97 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.96 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.96 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.96 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.96 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.96 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.96 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.96 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.96 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.95 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.95 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.95 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.95 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.95 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.95 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.95 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.95 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.95 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.93 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.93 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.93 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.92 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.92 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.92 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.91 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.9 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.9 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.9 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.89 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.89 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.88 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.88 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.88 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.88 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.88 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.87 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.87 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.86 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.86 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.85 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.85 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.84 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.84 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.84 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.82 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.82 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.82 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.82 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.81 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.79 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.79 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.78 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.77 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.76 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.75 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.74 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.73 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.73 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.73 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.73 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.72 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.72 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.71 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.71 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.71 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.69 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.68 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.67 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.67 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.65 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.64 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.63 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.62 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.61 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.59 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.59 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.58 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.58 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.58 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.57 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.55 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.55 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.54 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.53 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.51 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.51 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.51 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.49 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.48 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.47 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.46 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.44 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.43 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.42 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.41 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.41 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.41 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.4 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.4 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.39 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.35 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.35 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.34 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.32 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.29 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.25 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.25 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.24 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.23 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.22 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.19 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.19 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.12 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.12 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.1 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.08 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.08 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.07 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.07 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.06 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.04 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.02 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.99 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.94 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.93 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.82 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.82 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.81 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.8 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.79 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.78 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.76 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.76 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.76 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.75 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.73 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.65 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.63 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.62 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.6 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.54 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.51 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.5 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.48 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.47 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.41 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.41 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.4 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.38 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.35 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.27 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.24 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.24 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.24 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.22 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.22 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.22 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.2 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.19 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.14 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.14 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.13 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.12 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.09 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.04 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.03 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.02 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.01 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.01 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.01 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.92 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.91 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.89 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.85 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.85 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.85 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.81 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.79 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.71 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.67 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.66 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.66 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.64 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.55 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.42 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.37 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.37 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.36 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.34 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.33 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 97.27 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.22 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.16 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 97.16 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.15 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.14 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.09 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.04 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.04 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 96.99 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 96.94 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 96.93 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 96.9 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.9 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 96.84 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 96.83 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 96.8 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 96.67 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 96.5 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 96.48 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 96.43 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 95.94 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 95.84 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 95.8 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 95.73 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 95.73 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 95.7 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 95.64 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 95.61 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 95.54 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 95.43 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 95.36 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 95.21 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 94.92 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 94.85 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 94.84 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 94.76 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 94.54 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 94.46 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 94.19 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 94.18 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 94.04 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 93.97 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 93.87 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 93.81 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 93.75 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 93.69 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 93.6 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 93.34 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 91.29 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 90.56 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 88.01 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 83.08 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 81.37 |
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=371.50 Aligned_cols=302 Identities=22% Similarity=0.379 Sum_probs=268.2
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
...+.+|.+.|++++|+| ++.+|++|+.||+|+|||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 101 ~~~l~gh~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp SCEEECCSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred eEeecccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 356889999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
.+++++..+.+|...|.+++|+|++++|++|+.|+.|++||++++.++..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ ||+.++.. ...+.+|... +
T Consensus 260 v-------------wd~~~~~~--------------------~~~~~~h~~~-------v-------------------- 279 (410)
T 1vyh_C 260 V-------------WVVATKEC--------------------KAELREHRHV-------V-------------------- 279 (410)
T ss_dssp E-------------EETTTCCE--------------------EEEECCCSSC-------E--------------------
T ss_pred E-------------EECCCCce--------------------eeEecCCCce-------E--------------------
Confidence 9 99998877 6667777766 6
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts 327 (845)
.++.|+|++..... .............++. +|++|+.|+.|++||+.++.++.++.+|...|++
T Consensus 280 -------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~-----~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~ 343 (410)
T 1vyh_C 280 -------ECISWAPESSYSSI----SEATGSETKKSGKPGP-----FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343 (410)
T ss_dssp -------EEEEECCSCGGGGG----GGCCSCC-------CC-----EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred -------EEEEEcCcccccch----hhhccccccccCCCCC-----EEEEEeCCCeEEEEECCCCceEEEEECCCCcEEE
Confidence 77888877542100 0000111122233455 8999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
++|+|+|++|++|+.|+ |++||+.+++++..+.+|...|++++|+ ++.+|+++ |.+|..
T Consensus 344 v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 99999999999999999 9999999999999999999999999999 88888777 999964
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=348.95 Aligned_cols=288 Identities=22% Similarity=0.325 Sum_probs=254.5
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
+...++|.+|.+.|++++|+| ++++|++|+.||+|++||+.++..+..+..|..+|.+++|+|++++|++|+.|++|++
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred ceeEEeecCCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 344568999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEec-CCCEEEEEeC
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGE 162 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSP-dg~~Lasgs~ 162 (845)
||+.+++.+..+.+|...|.+++|+|++++|++|+.||+|++||++++ .....+.+|...|.+++|+| ++.+|++|+.
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999877 45677889999999999999 6789999999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe-cCCCCCccceeeEeeeccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT-KGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~-~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
|+.|++ ||+.++.. ...+. ++... +
T Consensus 162 D~~v~i-------------wd~~~~~~--------------------~~~~~~~~~~~-------v-------------- 187 (304)
T 2ynn_A 162 DRTVKV-------------WSLGQSTP--------------------NFTLTTGQERG-------V-------------- 187 (304)
T ss_dssp TSEEEE-------------EETTCSSC--------------------SEEEECCCTTC-------E--------------
T ss_pred CCeEEE-------------EECCCCCc--------------------cceeccCCcCc-------E--------------
Confidence 999999 99987655 22222 22222 3
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN 321 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh 321 (845)
..+.|+|. +++. +|++|+.|+.|++||+++++++.++.+|
T Consensus 188 -------------~~~~~~~~----------------------~~~~-----~l~s~s~D~~i~iWd~~~~~~~~~~~~h 227 (304)
T 2ynn_A 188 -------------NYVDYYPL----------------------PDKP-----YMITASDDLTIKIWDYQTKSCVATLEGH 227 (304)
T ss_dssp -------------EEEEECCS----------------------TTCC-----EEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred -------------EEEEEEEc----------------------CCCC-----EEEEEcCCCeEEEEeCCCCccceeeCCC
Confidence 44455442 1233 8999999999999999999999999999
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCc--eEEEE----EEEEeeC
Q psy467 322 SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQ--LWFRR----VGTWSHQ 387 (845)
Q Consensus 322 ~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~--lLaaS----VsiW~~d 387 (845)
...|.+++|+|++++|++|+.|+ |+|||+.+++++..+..|...+++++|+ ++. +++++ +.+|.+.
T Consensus 228 ~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC
T ss_pred CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEec
Confidence 99999999999999999999999 9999999999999999999999999998 553 46666 6777654
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=350.82 Aligned_cols=283 Identities=19% Similarity=0.312 Sum_probs=256.7
Q ss_pred eEEeccCCCcEEEEEEecC---CCCEEEEEeCCCeEEEEECCCCee--EEEecCCCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 8 AEDFMAHGASVNCLALGKK---SGQVLATGGDDKKVNLWALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~---dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
.+.+.+|.+.|++++|+|+ ++.+|++|+.|++|+||++.+++. ...+.+|...|.+++|++++.++++++.|++|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 3677899999999999873 467999999999999999977654 45689999999999999999999999999999
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
++||+.+++.+..+..|...+.+++|+|++++|++++.||.|++||+++++....+..+...|.+++|+|++++|++++.
T Consensus 105 ~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 105 RLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC
Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
||.|++ ||+++++. +..+.+|... |
T Consensus 185 dg~i~i-------------wd~~~~~~--------------------~~~~~~h~~~-------v--------------- 209 (321)
T 3ow8_A 185 DGIINI-------------FDIATGKL--------------------LHTLEGHAMP-------I--------------- 209 (321)
T ss_dssp TSCEEE-------------EETTTTEE--------------------EEEECCCSSC-------C---------------
T ss_pred CCeEEE-------------EECCCCcE--------------------EEEEcccCCc-------e---------------
Confidence 999999 99998877 6666666555 4
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
.+++|+|++. +|++|+.|+.|++||+++++++.++.+|.
T Consensus 210 ------------~~l~~spd~~-----------------------------~l~s~s~dg~i~iwd~~~~~~~~~~~~h~ 248 (321)
T 3ow8_A 210 ------------RSLTFSPDSQ-----------------------------LLVTASDDGYIKIYDVQHANLAGTLSGHA 248 (321)
T ss_dssp ------------CEEEECTTSC-----------------------------EEEEECTTSCEEEEETTTCCEEEEECCCS
T ss_pred ------------eEEEEcCCCC-----------------------------EEEEEcCCCeEEEEECCCcceeEEEcCCC
Confidence 5566666655 99999999999999999999999999999
Q ss_pred CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 323 STIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 323 ~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
..|.+++|+|+|++|++++.|+ |+|||+.+++++.++.+|.+.|++++|+ ++++|+++ |.+|..
T Consensus 249 ~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 249 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 9999999999999999999999 9999999999999999999999999999 88888776 899963
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=346.22 Aligned_cols=282 Identities=21% Similarity=0.306 Sum_probs=256.5
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
...++|.+|.+.|++++|+| ++++|++|+.||+|++||..+++.+..+..|...|.+++|+|++++|++|+.|+.|++|
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred hhheeecCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 44678999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCC----cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 86 NLAVP----TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 86 Dl~tg----~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
++.++ .....+.+|.+.|.++.|++++ .+++++.|+.|++||+.+++++..+.+|...|.+++|+|+++++++|+
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 99875 4567788999999999999887 489999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
.|+.|++ ||++++.. +..+.+|... |
T Consensus 204 ~d~~v~~-------------wd~~~~~~--------------------~~~~~~h~~~-------v-------------- 229 (340)
T 1got_B 204 CDASAKL-------------WDVREGMC--------------------RQTFTGHESD-------I-------------- 229 (340)
T ss_dssp TTSCEEE-------------EETTTCSE--------------------EEEECCCSSC-------E--------------
T ss_pred CCCcEEE-------------EECCCCee--------------------EEEEcCCcCC-------E--------------
Confidence 9999999 99998777 6666666655 5
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC-
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK- 320 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g- 320 (845)
.+++|+|++. +|++|+.||.|++||+++++.+..+..
T Consensus 230 -------------~~v~~~p~~~-----------------------------~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 267 (340)
T 1got_B 230 -------------NAICFFPNGN-----------------------------AFATGSDDATCRLFDLRADQELMTYSHD 267 (340)
T ss_dssp -------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTTTEEEEEECCT
T ss_pred -------------EEEEEcCCCC-----------------------------EEEEEcCCCcEEEEECCCCcEEEEEccC
Confidence 6666666666 999999999999999999988877763
Q ss_pred -CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 321 -NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 321 -h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
+...|++++|+|+|++|++|+.|+ |++||+.+++.+..+.+|.+.|++++|+ +|++|+++ |.+|.
T Consensus 268 ~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 268 NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 335799999999999999999999 9999999999999999999999999999 88888877 88883
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=340.79 Aligned_cols=283 Identities=18% Similarity=0.281 Sum_probs=256.0
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
...++|.+|.+.|+|++|+| ++++||+|+.||+|+|||..+++....+..|...|.+++|+|++.+|++|+.|+.+++|
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEEEecCCCCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 34678999999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCC------cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec--CCCEE
Q psy467 86 NLAVP------TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP--DGQWI 157 (845)
Q Consensus 86 Dl~tg------~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP--dg~~L 157 (845)
++... .....+..|...|.+++|+|++..|++++.|++|++||+++++++..+.+|...|.+++|+| ++++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 98643 34566778999999999999999999999999999999999999999999999999999988 57899
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
++|+.||.|++ ||+++++. +..+.+|... |
T Consensus 214 ~sgs~Dg~v~~-------------wd~~~~~~--------------------~~~~~~h~~~-------v---------- 243 (354)
T 2pbi_B 214 VSGGCDKKAMV-------------WDMRSGQC--------------------VQAFETHESD-------V---------- 243 (354)
T ss_dssp EEEETTSCEEE-------------EETTTCCE--------------------EEEECCCSSC-------E----------
T ss_pred EEEeCCCeEEE-------------EECCCCcE--------------------EEEecCCCCC-------e----------
Confidence 99999999999 99998877 6666666665 5
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t 317 (845)
.+++|+|++. +|++|+.|+.|++||+++++.+..
T Consensus 244 -----------------~~v~~~p~~~-----------------------------~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 244 -----------------NSVRYYPSGD-----------------------------AFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp -----------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTTTEEEEE
T ss_pred -----------------EEEEEeCCCC-----------------------------EEEEEeCCCeEEEEECCCCcEEEE
Confidence 6666666666 999999999999999999988877
Q ss_pred ecCC--CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 318 TEKN--SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 318 l~gh--~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
+..+ ...+++++|+|+|++|++|+.|+ |++||+.+++.+..+.+|.+.|++++|+ +|++|+++ |.+|.
T Consensus 278 ~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 278 YSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 7643 34789999999999999999999 9999999999999999999999999999 89988887 88883
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-37 Score=328.93 Aligned_cols=283 Identities=21% Similarity=0.421 Sum_probs=251.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
..++.+|.+.|++++|+| ++++|++|+.||.|++|+..+++....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 16 ~~~~~gh~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEcccCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 457899999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
.+++.+..+.+|...|.+++|+|++++|++|+.||.|++||+++++++..+..|...|.+++|+|++++|++++.||.|+
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 174 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec-CCCCCccceeeEeeecccccccccccchhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK-GRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~-h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
+ ||+++++. +..+.. +... +
T Consensus 175 ~-------------wd~~~~~~--------------------~~~~~~~~~~~-------~------------------- 195 (312)
T 4ery_A 175 I-------------WDTASGQC--------------------LKTLIDDDNPP-------V------------------- 195 (312)
T ss_dssp E-------------EETTTCCE--------------------EEEECCSSCCC-------E-------------------
T ss_pred E-------------EECCCCce--------------------eeEEeccCCCc-------e-------------------
Confidence 9 99988766 333221 1111 2
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEE
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vt 326 (845)
..++|+|++. +|++++.|+.|++||+.+++++..+.+|...+.
T Consensus 196 --------~~~~~~~~~~-----------------------------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 238 (312)
T 4ery_A 196 --------SFVKFSPNGK-----------------------------YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 238 (312)
T ss_dssp --------EEEEECTTSS-----------------------------EEEEEETTTEEEEEETTTTEEEEEECSSCCSSS
T ss_pred --------EEEEECCCCC-----------------------------EEEEEcCCCeEEEEECCCCcEEEEEEecCCceE
Confidence 3444555544 999999999999999999999999998866433
Q ss_pred E--EEE-eCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-------EEEEeeC
Q psy467 327 R--LTF-SEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-------VGTWSHQ 387 (845)
Q Consensus 327 s--laf-SpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-------VsiW~~d 387 (845)
+ ..+ .+++.+|++|+.|+ |++||+.+++.+..+.+|...|.+++|+ ++.+++++ |.+|..+
T Consensus 239 ~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 239 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 2 234 46899999999999 9999999999999999999999999999 88887765 8899754
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=367.51 Aligned_cols=348 Identities=17% Similarity=0.237 Sum_probs=277.0
Q ss_pred EEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 9 EDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
..+.+|.+.|++++|+| ++. .|++|+.|++|++||..+++....+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 141 ~~l~gh~~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp BCCCCCSSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ceecCCCCCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 56889999999999999 665 7999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEc-------CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-----------------------
Q psy467 88 AVPTVQRTLN-------GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT----------------------- 137 (845)
Q Consensus 88 ~tg~~v~~l~-------~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~----------------------- 137 (845)
.+++.+..+. +|.+.|.+++|+|++++|++++.|++|++||+.+++++..
T Consensus 220 ~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 220 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEE
T ss_pred CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEE
Confidence 9999988884 7999999999999999999999999999999988765443
Q ss_pred --------------------EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC---C
Q psy467 138 --------------------YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP---P 194 (845)
Q Consensus 138 --------------------~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~---~ 194 (845)
+.+|...|.+++|+|+|++|++++.|+.|++ ||+.++...... +
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~-------------Wd~~~~~~~~~~~~~h 366 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINS-------------WDISTGISNRVFPDVH 366 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE-------------EETTTCCEEECSSCSC
T ss_pred EeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEE-------------EECCCCceeeecccCC
Confidence 3468889999999999999999999999999 999988764432 4
Q ss_pred CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCC-------
Q psy467 195 PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNR------- 267 (845)
Q Consensus 195 ~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~------- 267 (845)
...+.++++++++.++.. . .+..+.+|.+......... .... ........++++|++....
T Consensus 367 ~~~v~~~~~s~~~~l~s~-s------~d~~v~~w~~~~~~~~~~~----~~~~-~~~~~~~~~~~s~dg~~~~~~~~~~v 434 (611)
T 1nr0_A 367 ATMITGIKTTSKGDLFTV-S------WDDHLKVVPAGGSGVDSSK----AVAN-KLSSQPLGLAVSADGDIAVAACYKHI 434 (611)
T ss_dssp SSCEEEEEECTTSCEEEE-E------TTTEEEEECSSSSSSCTTS----CCEE-ECSSCEEEEEECTTSSCEEEEESSEE
T ss_pred cceEEEEEECCCCcEEEE-E------cCCceEEeecCCccccccc----eeee-ecCCCCcEEEEeCCCcEEEEEeCceE
Confidence 567788899987754432 1 1122334443321110000 0000 0011125567777763210
Q ss_pred ----CC--cccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE--EEEecCCCCCEEEEEEeCCCCEEEE
Q psy467 268 ----SG--TCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL--VSTTEKNSSTIRRLTFSEGGECLLG 339 (845)
Q Consensus 268 ----~~--~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~--l~tl~gh~~~VtslafSpdG~~Las 339 (845)
.+ ....+...+.+++|+|||+ +|++|+.|+.|++||+.++.. +.. .+|...|++++|||||++|++
T Consensus 435 ~~~~~~~~~~~~~~~~v~~va~spdg~-----~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las 508 (611)
T 1nr0_A 435 AIYSHGKLTEVPISYNSSCVALSNDKQ-----FVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVA 508 (611)
T ss_dssp EEEETTEEEEEECSSCEEEEEECTTSC-----EEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEE
T ss_pred EEEeCCceeeeecCCCceEEEEeCCCC-----EEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEE
Confidence 00 1112346688999999999 999999999999999987654 334 679999999999999999999
Q ss_pred EeCCC-EEEEEecC-CceEEE--ecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 340 GDTEG-LKVYGWEP-ARQYDA--QPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 340 gs~DG-I~IWDl~t-gk~l~t--l~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
++.|+ |++|++.+ ++++.. +..|...|++++|+ ||++|+++ |.+|.++.
T Consensus 509 ~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 509 TDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp EETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred EcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 99999 99999988 665543 34599999999999 99999887 99998764
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=329.06 Aligned_cols=283 Identities=23% Similarity=0.368 Sum_probs=250.4
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-----CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCc
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-----SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGS 81 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-----~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGt 81 (845)
...+|.+|.+.|++++|+|+++++|++|+.|++|++|++.. +..+..+.+|...|.+++|+|++++|++|+.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 35689999999999999995568999999999999999853 3457788999999999999999999999999999
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC------CC
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD------GQ 155 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd------g~ 155 (845)
|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|+.|++||++ +.++..+.+|...|.+++|+|. +.
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CC
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999996 5678888899999999999984 45
Q ss_pred EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 156 WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 156 ~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
.+++++.|+.|++ ||+.+++. ...+.+|... |
T Consensus 168 ~l~s~~~d~~i~~-------------wd~~~~~~--------------------~~~~~~h~~~-------v-------- 199 (319)
T 3frx_A 168 TIISAGNDKMVKA-------------WNLNQFQI--------------------EADFIGHNSN-------I-------- 199 (319)
T ss_dssp EEEEEETTSCEEE-------------EETTTTEE--------------------EEEECCCCSC-------E--------
T ss_pred EEEEEeCCCEEEE-------------EECCcchh--------------------heeecCCCCc-------E--------
Confidence 8999999999999 99987766 5666666665 5
Q ss_pred ccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l 315 (845)
.+++|+|++. +|++|+.||.|++||+.+++++
T Consensus 200 -------------------~~~~~sp~g~-----------------------------~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 200 -------------------NTLTASPDGT-----------------------------LIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp -------------------EEEEECTTSS-----------------------------EEEEEETTCEEEEEETTTTEEE
T ss_pred -------------------EEEEEcCCCC-----------------------------EEEEEeCCCeEEEEECCCCcEE
Confidence 6666666666 9999999999999999999999
Q ss_pred EEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecC--------CCCCeEEEEEc-CCceEEEE-----E
Q psy467 316 STTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPM--------GWGKVQDLAVT-GTQLWFRR-----V 381 (845)
Q Consensus 316 ~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~--------h~~~VtsVafS-dg~lLaaS-----V 381 (845)
..+..+ ..|.+++|+|++.+|++++.+++++|+++.+..+..+.. |...+.+++|+ ||++|+++ |
T Consensus 232 ~~~~~~-~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i 310 (319)
T 3frx_A 232 YTLSAQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVI 310 (319)
T ss_dssp EEEECC-SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEecCC-CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceE
Confidence 998864 689999999999999999988899999998877766543 35679999999 99999888 9
Q ss_pred EEEeeC
Q psy467 382 GTWSHQ 387 (845)
Q Consensus 382 siW~~d 387 (845)
.+|.+.
T Consensus 311 ~vWd~~ 316 (319)
T 3frx_A 311 RVWQVM 316 (319)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999764
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=331.92 Aligned_cols=294 Identities=21% Similarity=0.340 Sum_probs=242.9
Q ss_pred CcceeeeeEEeccCCC-cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEE---EecCCCCCeEEEEEcCCCCEEEEE
Q psy467 1 MRAKVEKAEDFMAHGA-SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM---SLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 1 ~~irlw~l~~L~gH~~-~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~---~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
|+-.+..++++.+|.+ .|++++|+| +|++||+|+.|++|+||++.++.... ...+|...|.+++|+|++++|++|
T Consensus 1 ~~~~~~~~~~~~~h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 79 (345)
T 3fm0_A 1 MKDSLVLLGRVPAHPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA 79 (345)
T ss_dssp ---CEEEEEEECCSTTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE
T ss_pred CCccEEEeeeecCCCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE
Confidence 4556677899999998 999999999 99999999999999999998876432 236899999999999999999999
Q ss_pred ECCCcEEEEECCCC--cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC---ceEEEEcCCCCCeEEEEEe
Q psy467 77 CQSGSIKIWNLAVP--TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK---GCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 77 s~DGtV~VWDl~tg--~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~---~~l~~~~~h~~~V~sLafS 151 (845)
+.|++|++||+.++ +.+..+.+|...|.+++|+|++++|++|+.|+.|++||+.++ .++..+..|...|.+++|+
T Consensus 80 s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp ETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred ECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 99999999999876 457788999999999999999999999999999999999865 3466788899999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 152 PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 152 Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
|++++|++++.|+.|++ ||..++.. .....+.+|... |
T Consensus 160 p~~~~l~s~s~d~~i~~-------------w~~~~~~~------------------~~~~~~~~h~~~-------v---- 197 (345)
T 3fm0_A 160 PSQELLASASYDDTVKL-------------YREEEDDW------------------VCCATLEGHEST-------V---- 197 (345)
T ss_dssp SSSSCEEEEETTSCEEE-------------EEEETTEE------------------EEEEEECCCSSC-------E----
T ss_pred CCCCEEEEEeCCCcEEE-------------EEecCCCE------------------EEEEEecCCCCc-------e----
Confidence 99999999999999999 99876543 003344555544 4
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
.+++|+|++. +|++|+.|+.|++||...
T Consensus 198 -----------------------~~l~~sp~g~-----------------------------~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 198 -----------------------WSLAFDPSGQ-----------------------------RLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp -----------------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEEEEC
T ss_pred -----------------------EEEEECCCCC-----------------------------EEEEEeCCCeEEEecccc
Confidence 5555555555 999999999999999622
Q ss_pred ---------------CeEEEEecC-CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce---------EEEecCCCCC
Q psy467 312 ---------------FSLVSTTEK-NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ---------YDAQPMGWGK 365 (845)
Q Consensus 312 ---------------~~~l~tl~g-h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~---------l~tl~~h~~~ 365 (845)
++++.++.+ |...|.+++|+|++..|++++.|+ |++|+...+.. .....+|...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~ 305 (345)
T 3fm0_A 226 PGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQD 305 (345)
T ss_dssp TTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSC
T ss_pred CCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCc
Confidence 245566665 888999999999999999999999 99999976531 1234679999
Q ss_pred eEEEEEc-CC-ceEEEE-----EEEEeeCCC
Q psy467 366 VQDLAVT-GT-QLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 366 VtsVafS-dg-~lLaaS-----VsiW~~d~~ 389 (845)
|++++|+ ++ .+|+++ |.+|.....
T Consensus 306 V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 306 VNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred EeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 9999999 55 466665 999987543
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-37 Score=342.52 Aligned_cols=285 Identities=20% Similarity=0.314 Sum_probs=251.0
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
..++|.+|.+.|++++|+| ++++|++|+.||+|+|||..+++....+..|...|.+++|+|++++|++|+.|+.|++||
T Consensus 58 ~~~~l~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFN 136 (380)
T ss_dssp EEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEE
T ss_pred EeecccccccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence 4578999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCc-------EEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEE-----cCCCCCeEEEEEec-
Q psy467 87 LAVPT-------VQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTY-----RGHSKSINSIRFSP- 152 (845)
Q Consensus 87 l~tg~-------~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~-----~~h~~~V~sLafSP- 152 (845)
+.+.. ....+.+|.+.|.++.|+|++ ..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS
T ss_pred CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC
Confidence 97532 345677899999999999974 57999999999999999999998887 57889999999987
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC-ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV-HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg-~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++++|++|+.|+.|++ ||++.. .. +..+.+|... |
T Consensus 217 ~~~~l~sgs~D~~v~~-------------wd~~~~~~~--------------------~~~~~~h~~~-------v---- 252 (380)
T 3iz6_a 217 NANMFISGSCDTTVRL-------------WDLRITSRA--------------------VRTYHGHEGD-------I---- 252 (380)
T ss_dssp SCCEEEEEETTSCEEE-------------EETTTTCCC--------------------CEEECCCSSC-------C----
T ss_pred CCCEEEEEECCCeEEE-------------EECCCCCcc--------------------eEEECCcCCC-------e----
Confidence 8899999999999999 999743 33 4555566555 4
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
.+++|+|++. +|++|+.||.|++||+++
T Consensus 253 -----------------------~~v~~~p~~~-----------------------------~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 253 -----------------------NSVKFFPDGQ-----------------------------RFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp -----------------------CEEEECTTSS-----------------------------EEEEECSSSCEEEEETTT
T ss_pred -----------------------EEEEEecCCC-----------------------------eEEEEcCCCeEEEEECCC
Confidence 5566666655 999999999999999999
Q ss_pred CeEEEEecCCC-------CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe----cCCCCCeEEEEEc-CCceEE
Q psy467 312 FSLVSTTEKNS-------STIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ----PMGWGKVQDLAVT-GTQLWF 378 (845)
Q Consensus 312 ~~~l~tl~gh~-------~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl----~~h~~~VtsVafS-dg~lLa 378 (845)
++++..+..+. ..|++++|+|+|++|++|+.|| |++||+.+++.+..+ .+|.+.|++++|+ +|++|+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 360 (380)
T 3iz6_a 281 GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALC 360 (380)
T ss_dssp TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEE
T ss_pred CcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEE
Confidence 99998887543 2489999999999999999999 999999999888777 6799999999999 999998
Q ss_pred EE-----EEEEeeCC
Q psy467 379 RR-----VGTWSHQD 388 (845)
Q Consensus 379 aS-----VsiW~~d~ 388 (845)
++ |.+|...+
T Consensus 361 sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 361 TGSWDKNLKIWAFSG 375 (380)
T ss_dssp EECTTSCEEEEECCS
T ss_pred EeeCCCCEEEEecCC
Confidence 88 99998654
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-36 Score=327.07 Aligned_cols=285 Identities=21% Similarity=0.349 Sum_probs=237.6
Q ss_pred eeeeeEEeccCCCcEEEEEE-----ecCCCCEEEEEeCCCeEEEEECCC-------CeeEEEecCCCCCeEEEEEcCCCC
Q psy467 4 KVEKAEDFMAHGASVNCLAL-----GKKSGQVLATGGDDKKVNLWALGK-------SNCIMSLSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~Laf-----Sp~dg~~LaTgs~DG~I~IWdl~t-------~~~i~~l~~h~~~V~sLafSpdg~ 71 (845)
.+.....|.+|.+.|++++| ++.++++|++|+.|++|++||+.+ +.....+.+|...|.+++|+|++.
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 44567789999999999999 655889999999999999999864 345678899999999999999999
Q ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc---CCCCCeEEE
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSINSI 148 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~---~h~~~V~sL 148 (845)
+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.. ....... .|...|.++
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeee
Confidence 999999999999999999999999999999999999999999999999999999999974 4444433 688899999
Q ss_pred EEecCC----------CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCC
Q psy467 149 RFSPDG----------QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRP 218 (845)
Q Consensus 149 afSPdg----------~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~ 218 (845)
+|+|++ .+|++++.||.|++ ||.. ... ...+.+|..
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i-------------wd~~-~~~--------------------~~~~~~h~~ 214 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKV-------------WNTN-FQI--------------------RYTFKAHES 214 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEE-------------EETT-TEE--------------------EEEEECCSS
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEE-------------EcCC-Cce--------------------eEEEcCccc
Confidence 999987 78999999999999 9942 333 445555655
Q ss_pred CCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE
Q psy467 219 GGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS 298 (845)
Q Consensus 219 ~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg 298 (845)
. | .+++|+|++. +|++|
T Consensus 215 ~-------v---------------------------~~~~~s~~g~-----------------------------~l~sg 231 (343)
T 2xzm_R 215 N-------V---------------------------NHLSISPNGK-----------------------------YIATG 231 (343)
T ss_dssp C-------E---------------------------EEEEECTTSS-----------------------------EEEEE
T ss_pred c-------c---------------------------eEEEECCCCC-----------------------------EEEEE
Confidence 5 5 5566666665 99999
Q ss_pred eCCCeEEEEECCC-CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEE--Eec-----------CCCC
Q psy467 299 SADRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYD--AQP-----------MGWG 364 (845)
Q Consensus 299 s~DG~I~IWDl~s-~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~--tl~-----------~h~~ 364 (845)
+.||.|++||+.. ......+. +...|.+++|+|++++|+++++++|++|++.+++... .+. +|..
T Consensus 232 s~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (343)
T 2xzm_R 232 GKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNP 310 (343)
T ss_dssp ETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCC
T ss_pred cCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCC
Confidence 9999999999943 44444443 4567999999999999987766569999998876543 443 6788
Q ss_pred CeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 365 KVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 365 ~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
.|++++|+ +|++|+++ |.+|..+
T Consensus 311 ~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 311 QCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp CEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred ceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 89999999 88888887 9999753
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-36 Score=326.45 Aligned_cols=253 Identities=23% Similarity=0.406 Sum_probs=235.6
Q ss_pred cceeeee--------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEE
Q psy467 2 RAKVEKA--------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73 (845)
Q Consensus 2 ~irlw~l--------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~L 73 (845)
++++|++ ..+.+|...|.+++|++ ++.++++++.|++|++||+.+++.+..+..|...+.+++|+|++++|
T Consensus 59 ~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l 137 (321)
T 3ow8_A 59 LVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 137 (321)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEE
T ss_pred CEEEEECCCCCeeeeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEE
Confidence 4688874 35889999999999999 89999999999999999999999999999999999999999999999
Q ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC
Q psy467 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd 153 (845)
++|+.+|.|++|++++++....+..|...|.+++|+|++++|++|+.||.|++||+++++.+..+.+|...|.+++|+|+
T Consensus 138 ~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 217 (321)
T 3ow8_A 138 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 217 (321)
T ss_dssp EEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTT
T ss_pred EEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCC
Confidence 99999999999999999999999989999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccc
Q psy467 154 GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEEN 233 (845)
Q Consensus 154 g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~ 233 (845)
+++|++++.|+.|++ ||++++.. +..+.+|... |
T Consensus 218 ~~~l~s~s~dg~i~i-------------wd~~~~~~--------------------~~~~~~h~~~-------v------ 251 (321)
T 3ow8_A 218 SQLLVTASDDGYIKI-------------YDVQHANL--------------------AGTLSGHASW-------V------ 251 (321)
T ss_dssp SCEEEEECTTSCEEE-------------EETTTCCE--------------------EEEECCCSSC-------E------
T ss_pred CCEEEEEcCCCeEEE-------------EECCCcce--------------------eEEEcCCCCc-------e------
Confidence 999999999999999 99988776 6666666666 5
Q ss_pred ccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe
Q psy467 234 AESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS 313 (845)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~ 313 (845)
.+++|+|++. +|++++.|+.|++||+.+++
T Consensus 252 ---------------------~~~~~sp~~~-----------------------------~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 252 ---------------------LNVAFCPDDT-----------------------------HFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp ---------------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTTTE
T ss_pred ---------------------EEEEECCCCC-----------------------------EEEEEeCCCcEEEEeCCCCE
Confidence 6666666666 99999999999999999999
Q ss_pred EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 314 LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 314 ~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
++.++.+|...|.+++|+|+|++|++++.|+ |+|||..
T Consensus 282 ~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 282 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999 9999963
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=354.48 Aligned_cols=346 Identities=14% Similarity=0.186 Sum_probs=272.5
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-------CCCCCeEEEEEcC
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-------GHSTPVESVQFGN 68 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-------~h~~~V~sLafSp 68 (845)
++++|+ ++.+.+|.+.|++++|+| +|++||+|+.|++|++||+.+++.+..+. +|...|.+++|+|
T Consensus 171 ~v~lwd~~~~~~~~~l~~H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp 249 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP 249 (611)
T ss_dssp CEEEEETTTBEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT
T ss_pred eEEEEECCCCeEeeeeccccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC
Confidence 467776 467899999999999999 99999999999999999999999988884 7999999999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEE-------------------------------------------EEcCCCCCeEE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQR-------------------------------------------TLNGHKSSITS 105 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~-------------------------------------------~l~~h~~~V~~ 105 (845)
++++|++++.|++|++||+.+++.+. .+.+|...|.+
T Consensus 250 dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~ 329 (611)
T 1nr0_A 250 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITA 329 (611)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEE
Confidence 99999999999999999999876544 33578899999
Q ss_pred EEEccCCCEEEEEECCCeEEEEECCCCceEEEE-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEEC
Q psy467 106 VDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDL 184 (845)
Q Consensus 106 lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl 184 (845)
++|+|++++|++++.|+.|++||+.++.+...+ ..|...|.+++|++++ .+++++.|+.+++ |++
T Consensus 330 l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~-------------w~~ 395 (611)
T 1nr0_A 330 LSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKV-------------VPA 395 (611)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEE-------------ECS
T ss_pred EEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEE-------------eec
Confidence 999999999999999999999999998887665 5688999999999765 6889999999999 988
Q ss_pred CCCccCCCC-----CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEE
Q psy467 185 SLVHPLGTP-----PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIF 259 (845)
Q Consensus 185 ~tg~~l~~~-----~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~f 259 (845)
..+...... .......+++++++..+..... ..+.++.... . ..........+++|
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~-------~~v~~~~~~~---~---------~~~~~~~~v~~va~ 456 (611)
T 1nr0_A 396 GGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY-------KHIAIYSHGK---L---------TEVPISYNSSCVAL 456 (611)
T ss_dssp SSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEES-------SEEEEEETTE---E---------EEEECSSCEEEEEE
T ss_pred CCccccccceeeeecCCCCcEEEEeCCCcEEEEEeC-------ceEEEEeCCc---e---------eeeecCCCceEEEE
Confidence 765542211 1234456778888865544321 1122322100 0 00001122367788
Q ss_pred cCCCCcCCC--------------C-----cccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-CeEEEE--
Q psy467 260 QPHRSLNRS--------------G-----TCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-FSLVST-- 317 (845)
Q Consensus 260 spdg~~~~~--------------~-----~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~~~l~t-- 317 (845)
+|++..... + ....+...|++++|+|||+ +|++++.|+.|++||+.+ ++++..
T Consensus 457 spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~-----~las~s~d~~v~~w~~~~~~~~~~~~~ 531 (611)
T 1nr0_A 457 SNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGA-----FLVATDQSRKVIPYSVANNFELAHTNS 531 (611)
T ss_dssp CTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSS-----EEEEEETTSCEEEEEGGGTTEESCCCC
T ss_pred eCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCC-----EEEEEcCCCCEEEEEcCCCCceeeeee
Confidence 888764311 1 1123567799999999999 999999999999999987 666544
Q ss_pred ecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc-eE-EEecCC-CCCeEEEEEc-CCceEEEE----EEEEee
Q psy467 318 TEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR-QY-DAQPMG-WGKVQDLAVT-GTQLWFRR----VGTWSH 386 (845)
Q Consensus 318 l~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk-~l-~tl~~h-~~~VtsVafS-dg~lLaaS----VsiW~~ 386 (845)
+.+|...|++++|+|||++||+|+.|+ |+||+++++. .+ ..+.+| ...|++++|+ +++++.++ |.+|.+
T Consensus 532 ~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 532 WTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 609 (611)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred eeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCEEEEecCCCCEEEEec
Confidence 334999999999999999999999999 9999999875 33 667789 8999999999 88833444 999975
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=329.89 Aligned_cols=285 Identities=24% Similarity=0.397 Sum_probs=241.4
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCC------------------CeEEEEEcCCCCE
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST------------------PVESVQFGNGEET 72 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~------------------~V~sLafSpdg~~ 72 (845)
..+|.+.|.|++|+| +|++||+|+ ++.+++|++.+++.+..+..|.. .|.+++|+|++++
T Consensus 60 ~~~h~~~V~~v~fsp-dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 60 SLDHTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp EEECSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred ecCCCCEEEEEEECC-CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 347999999999999 999999986 67999999999998888876542 3999999999999
Q ss_pred EEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 73 LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+. +...+.+++|+|
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~ 216 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSP 216 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECS
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999888776 566799999999
Q ss_pred -CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 153 -DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 153 -dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++++|++++.|+.|++ ||++++.. +..+......
T Consensus 217 ~~~~~l~~~s~d~~v~i-------------wd~~~~~~--------------------~~~~~~~~~~------------ 251 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRV-------------WDSETGFL--------------------VERLDSENES------------ 251 (393)
T ss_dssp TTCCEEEEEETTSCEEE-------------EETTTCCE--------------------EEEEC-----------------
T ss_pred CCCCEEEEEcCCCcEEE-------------EECCCCcE--------------------EEeecccccC------------
Confidence 8999999999999999 99988776 3332110000
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
...+...|.+++|+|+++ +|++|+.|+.|++||+.+
T Consensus 252 ---------------------------------------~~~h~~~v~~v~~~~~g~-----~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 252 ---------------------------------------GTGHKDSVYSVVFTRDGQ-----SVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp ----------------------------------------CCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEEC--
T ss_pred ---------------------------------------CCCCCCCEEEEEECCCCC-----EEEEEeCCCEEEEEECCC
Confidence 001223456666666666 999999999999999975
Q ss_pred ------------CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEcC-----
Q psy467 312 ------------FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVTG----- 373 (845)
Q Consensus 312 ------------~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafSd----- 373 (845)
+.+...+.+|...|.+++|+|++++|++|+.|+ |++||+.+++.+..+.+|.+.|.+++|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~ 367 (393)
T 1erj_A 288 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLG 367 (393)
T ss_dssp -------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTC
T ss_pred CCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcC
Confidence 345667889999999999999999999999999 99999999999999999999999999983
Q ss_pred --CceEEEE-----EEEEeeC
Q psy467 374 --TQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 374 --g~lLaaS-----VsiW~~d 387 (845)
+.+|+++ |.+|...
T Consensus 368 p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 368 PEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp TTCEEEEEEETTSEEEEEEEE
T ss_pred CCCCEEEEECCCCcEEECccc
Confidence 5667766 9999764
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=343.22 Aligned_cols=319 Identities=28% Similarity=0.419 Sum_probs=270.4
Q ss_pred ceeee-----eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE
Q psy467 3 AKVEK-----AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77 (845)
Q Consensus 3 irlw~-----l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs 77 (845)
+++|+ ++.+.+|...|++++|+| ++++|++++.|+.|++|+. +++.+..+.+|...|.+++|+|++++|++++
T Consensus 245 i~~w~~~~~~~~~~~~~~~~v~~v~~~~-d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~ 322 (577)
T 2ymu_A 245 VKLWNRNGQLLQTLTGHSSSVNGVAFRP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASAS 322 (577)
T ss_dssp EEEECTTSCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEe
Confidence 56675 568899999999999999 9999999999999999996 5677888999999999999999999999999
Q ss_pred CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 78 ~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
.|+.|++||... ..+..+.+|...|.+++|+|++++|++++.||.|++||. +++.+..+..|...|.+++|+|++++|
T Consensus 323 ~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l 400 (577)
T 2ymu_A 323 DDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI 400 (577)
T ss_dssp TTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred CCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 999999999864 556778889999999999999999999999999999995 578888999999999999999999999
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC--CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT--PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~--~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
++++.|+.|++ ||.. ++.+.. .+...+..++|+|+++.+...... ..+.+|+
T Consensus 401 ~~~~~d~~v~~-------------~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------~~v~~w~------ 454 (577)
T 2ymu_A 401 ASASDDKTVKL-------------WNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDD------KTVKLWN------ 454 (577)
T ss_dssp EEEETTSEEEE-------------ECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETT------SEEEEEE------
T ss_pred EEEeCCCEEEE-------------EeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCC------CEEEEEE------
Confidence 99999999999 8854 333222 235667788999999877653221 1222322
Q ss_pred ccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l 315 (845)
.++.. ......+...|++++|+||++ +|++++.|+.|++||. +++++
T Consensus 455 -------------------------~~~~~--~~~~~~~~~~v~~~~~spd~~-----~las~~~d~~i~iw~~-~~~~~ 501 (577)
T 2ymu_A 455 -------------------------RNGQL--LQTLTGHSSSVRGVAFSPDGQ-----TIASASDDKTVKLWNR-NGQLL 501 (577)
T ss_dssp -------------------------TTSCE--EEEEECCSSCEEEEEECTTSC-----EEEEEETTSEEEEEET-TSCEE
T ss_pred -------------------------CCCCE--EEEEcCCCCCEEEEEEcCCCC-----EEEEEeCCCEEEEEcC-CCCEE
Confidence 11110 001122346789999999999 9999999999999995 67889
Q ss_pred EEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 316 STTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 316 ~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
..+.+|...|++++|+|+|++||+++.|+ |+|||. +++++..+.+|.+.|++++|+ ||++|+++ |.+|.
T Consensus 502 ~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 502 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999999999999999999 999995 678999999999999999999 89888876 88884
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=332.88 Aligned_cols=290 Identities=18% Similarity=0.202 Sum_probs=227.1
Q ss_pred eeeeeE--EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-----------CeeEEEecCCCCCeEEEEEcCCC
Q psy467 4 KVEKAE--DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-----------SNCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 4 rlw~l~--~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-----------~~~i~~l~~h~~~V~sLafSpdg 70 (845)
|.|.+. ....|...|.+++|+| +|++|++++ |+++++||... .........|...|.+++|+|++
T Consensus 17 r~w~~~~~~~~~~~~~v~~~~fs~-dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 94 (344)
T 4gqb_B 17 REWNLPPNAPACMERQLEAARYRS-DGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER 94 (344)
T ss_dssp ------CCSCSSCCSEEEEEEECT-TSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT
T ss_pred cccCCCCCCcccccCCEEEEEECC-CCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC
Confidence 455543 2456888999999999 999999887 66788886310 01111122356789999999985
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEE----EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeE
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRT----LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~----l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~ 146 (845)
.|++|+.||+|+|||+.+++.+.. ..+|...|++++|+|++++|++|+.||+|++||+++++++..+.+|...|.
T Consensus 95 -~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 95 -GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp -EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred -eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 788999999999999998865433 457999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 147 SIRFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 147 sLafSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+++|++++ .+|++++.|+.|++ ||+++++. +..+..+...
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~i-------------wd~~~~~~--------------------~~~~~~~~~~------ 214 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILL-------------WDTRCPKP--------------------ASQIGCSAPG------ 214 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEE-------------EETTSSSC--------------------EEECC----C------
T ss_pred EEEecCCCCCceeeecccccccc-------------ccccccce--------------------eeeeecceee------
Confidence 99999987 47899999999999 99998877 3333211111
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
..+.+++|+|++.. +|++|+.||.|+
T Consensus 215 --------------------------------------------------~~~~~~~~~p~~~~----~l~sg~~dg~v~ 240 (344)
T 4gqb_B 215 --------------------------------------------------YLPTSLAWHPQQSE----VFVFGDENGTVS 240 (344)
T ss_dssp --------------------------------------------------CCEEEEEECSSCTT----EEEEEETTSEEE
T ss_pred --------------------------------------------------ccceeeeecCCCCc----ceEEeccCCcEE
Confidence 11234444443221 899999999999
Q ss_pred EEECCCCeEEEEecCCCCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCce-EEEE-
Q psy467 306 FWDLEKFSLVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQL-WFRR- 380 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~l-LaaS- 380 (845)
+||+++++++.++.+|...|++++|+|+| ++||+|+.|+ |+|||+.+++++ .+.+|.+.|++++|+ +++. ++++
T Consensus 241 ~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 241 LVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp EEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 99999999999999999999999999998 5899999999 999999998765 568899999999999 7764 4443
Q ss_pred ----EEEEeeCCCC
Q psy467 381 ----VGTWSHQDSG 390 (845)
Q Consensus 381 ----VsiW~~d~~~ 390 (845)
|.+|.++.++
T Consensus 320 ~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 320 WDHQVVHHVVPTEP 333 (344)
T ss_dssp TTSCEEEEECCC--
T ss_pred CCCeEEEEECCCCC
Confidence 9999876543
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-35 Score=318.70 Aligned_cols=286 Identities=19% Similarity=0.278 Sum_probs=231.5
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC--eeEEEe-cC-CCCCeEEEEEcCCCCEEEEEECCCc
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS--NCIMSL-SG-HSTPVESVQFGNGEETLSAGCQSGS 81 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~i~~l-~~-h~~~V~sLafSpdg~~LaSgs~DGt 81 (845)
..+++|.+|.+.|++++|++ + +||+|+.|++|++|++..+ .....+ .+ |...|.+++|+|++++|++|+.|++
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~-~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQ-G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp EEEEEEECCSSCEEEEEEET-T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccceeeccCCCceeeeccCC-C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 45788999999999999998 4 9999999999999999764 455556 44 9999999999999999999999999
Q ss_pred EEEEECCC-------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC----CceEEEEcCCCCCeEEEEE
Q psy467 82 IKIWNLAV-------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR----KGCIYTYRGHSKSINSIRF 150 (845)
Q Consensus 82 V~VWDl~t-------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t----~~~l~~~~~h~~~V~sLaf 150 (845)
|++||+.. .+.+..+.+|...|.+++|+|++++|++|+.|++|++||++. .+++..+.+|...|.+++|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99999853 356778899999999999999999999999999999999943 2567788899999999999
Q ss_pred ecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 151 SPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 151 SPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
+|++++|++++.|+.|++ ||..++.. ..+..+.+|... |
T Consensus 162 ~p~~~~l~s~s~D~~i~i-------------W~~~~~~~------------------~~~~~~~~h~~~-------v--- 200 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRI-------------WKDYDDDW------------------ECVAVLNGHEGT-------V--- 200 (330)
T ss_dssp CSSSSEEEEEETTSCEEE-------------EEEETTEE------------------EEEEEECCCSSC-------E---
T ss_pred CCCCCEEEEEcCCCeEEE-------------EECCCCCe------------------eEEEEccCCCCc-------E---
Confidence 999999999999999999 99765421 115566666666 5
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
.++.|+|++. +. +|++|+.|+.|++||+.
T Consensus 201 ------------------------~~~~~~~~~~----------------------~~-----~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 201 ------------------------WSSDFDKTEG----------------------VF-----RLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp ------------------------EEEEECCSSS----------------------SC-----EEEEEETTSCEEEEEEE
T ss_pred ------------------------EEEEecCCCC----------------------ee-----EEEEEeCCCeEEEEEec
Confidence 6666666621 22 89999999999999987
Q ss_pred CC--------eEEEEecC-CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc--eEEE-ecCCCC-CeEEEEEc---C
Q psy467 311 KF--------SLVSTTEK-NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR--QYDA-QPMGWG-KVQDLAVT---G 373 (845)
Q Consensus 311 s~--------~~l~tl~g-h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk--~l~t-l~~h~~-~VtsVafS---d 373 (845)
.+ .+...+.+ |...|.+++|++++ +|++++.|+ |+||+..+++ .+.. +.+|.. .|++++|+ +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~ 308 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNG 308 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC----
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCC
Confidence 54 45566665 89999999999765 889999999 9999998874 3333 367877 89999999 3
Q ss_pred CceEEEE-----EEEEeeC
Q psy467 374 TQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 374 g~lLaaS-----VsiW~~d 387 (845)
+++|+++ |.+|..+
T Consensus 309 ~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 309 KTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp -CCEEEEETTSEEEEEEC-
T ss_pred ceEEEEecCCCcEEEEEec
Confidence 6777766 9999764
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=335.44 Aligned_cols=252 Identities=22% Similarity=0.423 Sum_probs=235.6
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
++++|+ .+.+.+|.+.|.+++|+| ++++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++++|++
T Consensus 131 ~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s 209 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 209 (410)
T ss_dssp CEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEE
T ss_pred eEEEEECCCCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 467887 468999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC--
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD-- 153 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd-- 153 (845)
|+.|++|++||+.++.++..+.+|...|.+++|+|++.+|++|+.|+.|++||+.++++...+..|...|.+++|+|+
T Consensus 210 ~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 289 (410)
T 1vyh_C 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESS 289 (410)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCG
T ss_pred EeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred ------------------CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec
Q psy467 154 ------------------GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 154 ------------------g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~ 215 (845)
+.+|++|+.|+.|++ ||++++.. +..+.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i-------------wd~~~~~~--------------------~~~~~~ 336 (410)
T 1vyh_C 290 YSSISEATGSETKKSGKPGPFLLSGSRDKTIKM-------------WDVSTGMC--------------------LMTLVG 336 (410)
T ss_dssp GGGGGGCCSCC-------CCEEEEEETTSEEEE-------------EETTTTEE--------------------EEEEEC
T ss_pred ccchhhhccccccccCCCCCEEEEEeCCCeEEE-------------EECCCCce--------------------EEEEEC
Confidence 678999999999999 99998887 777777
Q ss_pred CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 216 GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 216 h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
|... | .+++|+|++. +|
T Consensus 337 h~~~-------v---------------------------~~v~~~~~g~-----------------------------~l 353 (410)
T 1vyh_C 337 HDNW-------V---------------------------RGVLFHSGGK-----------------------------FI 353 (410)
T ss_dssp CSSC-------E---------------------------EEEEECSSSS-----------------------------CE
T ss_pred CCCc-------E---------------------------EEEEEcCCCC-----------------------------EE
Confidence 7666 5 6666777666 89
Q ss_pred EEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 296 TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
++|+.|+.|++||+.+++++.++.+|...|++++|+|++.+|++|+.|+ |+||++
T Consensus 354 ~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 354 LSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 9999999999999999999999999999999999999999999999999 999986
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-36 Score=330.09 Aligned_cols=288 Identities=15% Similarity=0.185 Sum_probs=226.9
Q ss_pred eeeee--EEeccCCCcEEEEEEecCCCCEEEEEeC------CCeEEEEECCCCeeE----EEecCCCCCeEEEEEcCCCC
Q psy467 4 KVEKA--EDFMAHGASVNCLALGKKSGQVLATGGD------DKKVNLWALGKSNCI----MSLSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 4 rlw~l--~~L~gH~~~V~~LafSp~dg~~LaTgs~------DG~I~IWdl~t~~~i----~~l~~h~~~V~sLafSpdg~ 71 (845)
+.|.+ ....+|.+.|++++||| +|++||+|+. |+.|++|+..++... ....+|...|.+++|+|++.
T Consensus 29 ~~w~~p~~~p~~H~~~V~~v~fSp-DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~ 107 (357)
T 4g56_B 29 SAWGRPVTAPACMEVQIGAVRYRR-DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG 107 (357)
T ss_dssp -----------CCCSEEEEEEECS-SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE
T ss_pred cccCCCCCCcccccCCEEEEEECC-CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC
Confidence 45554 34567999999999999 9999999997 788999998766532 33456889999999999975
Q ss_pred EEEEEECCCcEEEEECCCCcEEE----EEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEE
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQR----TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~----~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~s 147 (845)
+++++.||+|+|||+.+++... ...+|...|.+++|+|++++|++|+.||.|++||+++++++..+.+|...|.+
T Consensus 108 -~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 186 (357)
T 4g56_B 108 -ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNC 186 (357)
T ss_dssp -EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred -EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 5567789999999999876543 34579999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCC-EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceee
Q psy467 148 IRFSPDGQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 148 LafSPdg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
++|++++. ++++++.||.|++ ||+++++.. ..+..+.
T Consensus 187 v~~s~~~~~~~~s~~~dg~v~~-------------wd~~~~~~~--------------------~~~~~~~--------- 224 (357)
T 4g56_B 187 VAACPGKDTIFLSCGEDGRILL-------------WDTRKPKPA--------------------TRIDFCA--------- 224 (357)
T ss_dssp EEECTTCSSCEEEEETTSCEEE-------------CCTTSSSCB--------------------CBCCCTT---------
T ss_pred EEEccCCCceeeeeccCCceEE-------------EECCCCcee--------------------eeeeecc---------
Confidence 99999875 7899999999999 999887762 1111100
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEE
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNF 306 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~I 306 (845)
....+++++|+|++.. +|++|+.|+.|++
T Consensus 225 -----------------------------------------------~~~~v~~v~~sp~~~~----~la~g~~d~~i~~ 253 (357)
T 4g56_B 225 -----------------------------------------------SDTIPTSVTWHPEKDD----TFACGDETGNVSL 253 (357)
T ss_dssp -----------------------------------------------CCSCEEEEEECTTSTT----EEEEEESSSCEEE
T ss_pred -----------------------------------------------ccccccchhhhhcccc----eEEEeecccceeE
Confidence 0112344445544321 8999999999999
Q ss_pred EECCCCeEEEEecCCCCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc--CCceEEEE--
Q psy467 307 WDLEKFSLVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT--GTQLWFRR-- 380 (845)
Q Consensus 307 WDl~s~~~l~tl~gh~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS--dg~lLaaS-- 380 (845)
||+++++++.++.+|...|++++|+|++ ++||+|+.|+ |+|||+++++++..+ +|.+.|++++|+ ++++|+++
T Consensus 254 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 254 VNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGW 332 (357)
T ss_dssp EESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEET
T ss_pred EECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcC
Confidence 9999999999999999999999999987 6899999999 999999999887665 799999999999 67877766
Q ss_pred ---EEEEeeC
Q psy467 381 ---VGTWSHQ 387 (845)
Q Consensus 381 ---VsiW~~d 387 (845)
|.+|.+.
T Consensus 333 Dg~v~iW~~~ 342 (357)
T 4g56_B 333 DHKVLHHHLP 342 (357)
T ss_dssp TSCEEEEECC
T ss_pred CCeEEEEECC
Confidence 9999864
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=310.51 Aligned_cols=286 Identities=17% Similarity=0.261 Sum_probs=253.7
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
...+...|.+|.+.|++++|+| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|+
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIK 99 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred cccccEEEEEeeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 3456678999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC-----CeEEEEECCCCc-----------eEEEEcCCCC--Ce
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD-----SFIKLWDLRRKG-----------CIYTYRGHSK--SI 145 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D-----G~I~IWDl~t~~-----------~l~~~~~h~~--~V 145 (845)
+||+.+++.+..+. +...|.+++|+|++++|++++.+ |.|.+||+.... .+..+..|.. .+
T Consensus 100 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 100 LWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 99999999999888 88899999999999999999999 999999997553 3344455555 89
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
.+++|+|++++|++++.||.|++ ||+.+ +.. +..+..|...
T Consensus 179 ~~~~~~~~~~~l~~~~~dg~i~i-------------~d~~~~~~~--------------------~~~~~~~~~~----- 220 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHKDGKISK-------------YDVSNNYEY--------------------VDSIDLHEKS----- 220 (369)
T ss_dssp EEEEECGGGCEEEEEETTSEEEE-------------EETTTTTEE--------------------EEEEECCSSC-----
T ss_pred eEEEEcCCCCEEEEEcCCCEEEE-------------EECCCCcEe--------------------EEEEecCCCc-----
Confidence 99999999999999999999999 99987 444 5555555544
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ ..++|+|++. +|++++.|+.|
T Consensus 221 --v---------------------------~~~~~~~~~~-----------------------------~l~~~~~d~~i 242 (369)
T 3zwl_B 221 --I---------------------------SDMQFSPDLT-----------------------------YFITSSRDTNS 242 (369)
T ss_dssp --E---------------------------EEEEECTTSS-----------------------------EEEEEETTSEE
T ss_pred --e---------------------------eEEEECCCCC-----------------------------EEEEecCCceE
Confidence 4 5556666555 99999999999
Q ss_pred EEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC---------------EEEEEecCCceEEEecCCCCCeEEE
Q psy467 305 NFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG---------------LKVYGWEPARQYDAQPMGWGKVQDL 369 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG---------------I~IWDl~tgk~l~tl~~h~~~VtsV 369 (845)
++||+.+++.+..+. +...+.+++|+|+++++++++.++ +++||+.+++.+..+.+|...|+++
T Consensus 243 ~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~ 321 (369)
T 3zwl_B 243 FLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTV 321 (369)
T ss_dssp EEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEE
Confidence 999999999998888 678899999999999999998764 8999999999999999999999999
Q ss_pred EEc-CCceEEEE-----EEEEeeCC
Q psy467 370 AVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 370 afS-dg~lLaaS-----VsiW~~d~ 388 (845)
+|+ ++++|+++ |.+|.++.
T Consensus 322 ~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 322 AISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp EECTTSSEEEEEETTSEEEEEEECH
T ss_pred EECCCCCEEEEEcCCCeEEEEECcc
Confidence 999 88888887 99998754
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=332.69 Aligned_cols=328 Identities=27% Similarity=0.419 Sum_probs=275.3
Q ss_pred ceeee-----eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE
Q psy467 3 AKVEK-----AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77 (845)
Q Consensus 3 irlw~-----l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs 77 (845)
+++|+ ++.+.+|.+.|.+++|+| ++.+|++++.|+.|++|+. +++.+..+.+|...|.+++|+|+++.|++++
T Consensus 204 v~~w~~~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~ 281 (577)
T 2ymu_A 204 VKLWNRNGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASAS 281 (577)
T ss_dssp EEEECTTSCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCCEEEEEECC-CCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEe
Confidence 45664 578899999999999999 9999999999999999996 5678888999999999999999999999999
Q ss_pred CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 78 ~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
.|+.|++||.. ++.+..+.+|...|.+++|+|++++|++++.|+.|++||+. +..+..+..|...+.+++|+|++++|
T Consensus 282 ~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 282 DDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp TTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEE
Confidence 99999999975 67788899999999999999999999999999999999986 45667788899999999999999999
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
++++.|+.+++ ||.. ++.+..+ +...+.+++|+|+++.+..... +..+.+|+
T Consensus 360 ~~~~~dg~v~~-------------~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~------d~~v~~~~------ 413 (577)
T 2ymu_A 360 ASASDDKTVKL-------------WNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASD------DKTVKLWN------ 413 (577)
T ss_dssp EEEETTSEEEE-------------EETT-CCEEEEEECCSSCEEEEEECTTSSCEEEEET------TSEEEEEC------
T ss_pred EEEeCCCEEEE-------------EcCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeC------CCEEEEEe------
Confidence 99999999999 8854 3333222 3566788999999988765321 11222321
Q ss_pred ccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l 315 (845)
.++.. ......+...|++++|+||++ +|++++.|+.|++||. +++.+
T Consensus 414 -------------------------~~~~~--~~~~~~~~~~v~~~~~s~d~~-----~l~~~~~d~~v~~w~~-~~~~~ 460 (577)
T 2ymu_A 414 -------------------------RNGQL--LQTLTGHSSSVWGVAFSPDDQ-----TIASASDDKTVKLWNR-NGQLL 460 (577)
T ss_dssp -------------------------TTCCE--EEEEECCSSCEEEEEECTTSS-----EEEEEETTSEEEEEET-TSCEE
T ss_pred -------------------------CCCCE--EEEecCCCCCeEEEEECCCCC-----EEEEEcCCCEEEEEEC-CCCEE
Confidence 11110 001122346788999999998 9999999999999996 46788
Q ss_pred EEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 316 STTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 316 ~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
..+.+|...|++++|+|+|++|++++.|+ |++||. +++++..+.+|...|++++|+ +|++|+++ |.+|..++
T Consensus 461 ~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 461 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 89999999999999999999999999999 999994 678999999999999999999 99998887 99998666
Q ss_pred CCCccc
Q psy467 389 SGFSTL 394 (845)
Q Consensus 389 ~~~~~~ 394 (845)
+.+..+
T Consensus 540 ~~~~~~ 545 (577)
T 2ymu_A 540 QLLQTL 545 (577)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 554444
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=315.60 Aligned_cols=317 Identities=16% Similarity=0.224 Sum_probs=261.6
Q ss_pred ccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEEC----CCCe------eEEEecC----------CCCCeEEEEEcCCC
Q psy467 12 MAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWAL----GKSN------CIMSLSG----------HSTPVESVQFGNGE 70 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl----~t~~------~i~~l~~----------h~~~V~sLafSpdg 70 (845)
..|.+.|++++|+| +++ +||+|+.||.|++|++ .+++ ....+.. |...|.+++|+|++
T Consensus 42 ~~~~~~v~~~~~s~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 42 IVKLDNIVSSTWNP-LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEECSCCSEEEECS-SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeccCceEEEEECC-CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 34669999999999 888 9999999999999999 8887 4555554 67899999999999
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCC------
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS------ 144 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~------ 144 (845)
++|++++.||.|++|| .+++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+..+...
T Consensus 121 ~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 121 NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------
T ss_pred CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceee
Confidence 9999999999999999 668889999999999999999999999999999999999999999999998877776
Q ss_pred ---------eEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--CCCCCcceeecCCCCeEEEE
Q psy467 145 ---------INSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--PPQYTSSVPFSHNTSLRKSF 213 (845)
Q Consensus 145 ---------V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--~~~~i~svs~spdg~~l~~~ 213 (845)
+.+++|++++ .+++++.||.|++ ||+.+++.+... +...+..++|+|+++.+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~-------------~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFV-------------YQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp ------CCCBSCCEEEETT-EEEEECGGGCEEE-------------EETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred ccccCCcceeeEEEEcCCC-EEEEEcCCCeEEE-------------EEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 9999999975 5888999999999 999988765443 35678899999999877654
Q ss_pred ecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccce
Q psy467 214 TKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFI 293 (845)
Q Consensus 214 ~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~ 293 (845)
.. . ..+.+|++.... ....+ ..+...+.+++|+|++
T Consensus 266 ~~-d-----~~i~i~d~~~~~--------------------~~~~~------------~~~~~~i~~~~~~~~~------ 301 (425)
T 1r5m_A 266 SD-D-----GTLRIWHGGNGN--------------------SQNCF------------YGHSQSIVSASWVGDD------ 301 (425)
T ss_dssp ET-T-----SCEEEECSSSBS--------------------CSEEE------------CCCSSCEEEEEEETTT------
T ss_pred cC-C-----CEEEEEECCCCc--------------------cceEe------------cCCCccEEEEEECCCC------
Confidence 31 1 123333322110 00111 1234578899999987
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc------------------
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR------------------ 354 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk------------------ 354 (845)
++++++.|+.|++||+.+++++..+..|...|.+++|+|+|++|++++.|+ |++||+.+++
T Consensus 302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLP 381 (425)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEE
T ss_pred EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCccc
Confidence 588999999999999999999999999999999999999999999999999 9999999888
Q ss_pred --eEEEecCCCC--CeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 355 --QYDAQPMGWG--KVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 355 --~l~tl~~h~~--~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
.+..+..|.. .|++++|+ ++++|+++ |.+|.+++
T Consensus 382 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 382 IPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp CCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred chhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 8899999976 99999999 88888777 89997653
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-34 Score=312.11 Aligned_cols=252 Identities=23% Similarity=0.393 Sum_probs=224.2
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCCeEEEEEcCCCC
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~V~sLafSpdg~ 71 (845)
++++|+ +..+..|...|.+++|+| ++++|++|+.|+.|++|++.+. .....+.+|...|.++.|++++.
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 156 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ 156 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE
T ss_pred cEEEEECCCCCcceEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc
Confidence 467886 467889999999999999 9999999999999999999765 45677889999999999998764
Q ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEe
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafS 151 (845)
+++++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++|+.||.|++||++++.++..+.+|...|.+++|+
T Consensus 157 -l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~ 235 (340)
T 1got_B 157 -IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF 235 (340)
T ss_dssp -EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC
T ss_pred -EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 152 PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 152 Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
|++++|++++.||.|++ ||+++++. +..+..+..
T Consensus 236 p~~~~l~s~s~d~~v~i-------------wd~~~~~~--------------------~~~~~~~~~------------- 269 (340)
T 1got_B 236 PNGNAFATGSDDATCRL-------------FDLRADQE--------------------LMTYSHDNI------------- 269 (340)
T ss_dssp TTSSEEEEEETTSCEEE-------------EETTTTEE--------------------EEEECCTTC-------------
T ss_pred CCCCEEEEEcCCCcEEE-------------EECCCCcE--------------------EEEEccCCc-------------
Confidence 99999999999999999 99987765 333221100
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
...|++++|+|+|+ +|++|+.|+.|++||+.+
T Consensus 270 -------------------------------------------~~~v~~~~~s~~g~-----~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 270 -------------------------------------------ICGITSVSFSKSGR-----LLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp -------------------------------------------CSCEEEEEECTTSS-----EEEEEETTSEEEEEETTT
T ss_pred -------------------------------------------ccceEEEEECCCCC-----EEEEECCCCeEEEEEccc
Confidence 11344555555555 999999999999999999
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
++.+..+.+|.+.|++++|+|+|.+|++|+.|+ |+|||
T Consensus 302 ~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999999999 99996
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=317.17 Aligned_cols=282 Identities=17% Similarity=0.192 Sum_probs=246.7
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe------eEEEecCCCCCeEEEEEcCC----C---CE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN------CIMSLSGHSTPVESVQFGNG----E---ET 72 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~------~i~~l~~h~~~V~sLafSpd----g---~~ 72 (845)
...+.+.+|.+.|++++|+| ++|++|+.||.|++|++.+++ .+..+.+|...|.+++|+|+ + ++
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 34567899999999999987 799999999999999999887 78888999999999999999 9 99
Q ss_pred EEEEECCCcEEEEECCCCcE-----EEEEcCC-----CCCeEEEEEc----cCCCE-EEEEECCCeEEEEECCC------
Q psy467 73 LSAGCQSGSIKIWNLAVPTV-----QRTLNGH-----KSSITSVDFH----PYGDY-LCSGSLDSFIKLWDLRR------ 131 (845)
Q Consensus 73 LaSgs~DGtV~VWDl~tg~~-----v~~l~~h-----~~~V~~lafs----pdg~~-Lasgs~DG~I~IWDl~t------ 131 (845)
|++++.||.|++||+.+++. ...+..| ...|.+++|+ |++++ |++++.||.|++||+.+
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999999998886 8888888 5899999999 99999 99999999999999988
Q ss_pred CceEE-----EE-------cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCc
Q psy467 132 KGCIY-----TY-------RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTS 199 (845)
Q Consensus 132 ~~~l~-----~~-------~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~ 199 (845)
++.+. .+ ..|...|.+++|+|++ ++++++.||.|++ ||+++++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i-------------~d~~~~~~---------- 219 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQI-------------SELSTLRP---------- 219 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEE-------------EETTTTEE----------
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEE-------------EECCCCce----------
Confidence 66655 66 4488899999999999 9999999999999 99988776
Q ss_pred ceeecCCCCeEEEEec---C---CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccc
Q psy467 200 SVPFSHNTSLRKSFTK---G---RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVP 273 (845)
Q Consensus 200 svs~spdg~~l~~~~~---h---~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~ 273 (845)
+..+.. | ... + .+++|+|++.
T Consensus 220 ----------~~~~~~~~~h~~~~~~-------i---------------------------~~i~~~~~~~--------- 246 (397)
T 1sq9_A 220 ----------LYNFESQHSMINNSNS-------I---------------------------RSVKFSPQGS--------- 246 (397)
T ss_dssp ----------EEEEECCC---CCCCC-------E---------------------------EEEEECSSTT---------
T ss_pred ----------eEEEeccccccccCCc-------c---------------------------ceEEECCCCC---------
Confidence 555554 4 333 3 4555555554
Q ss_pred cccCceeEEEcCCCCcccceEEEEEeCC---CeEEEEECCCCeEEEEecC-------------CCCCEEEEEEeCCCCEE
Q psy467 274 VSVSRTSLSILPQSPMLCFILTTSSSAD---RTVNFWDLEKFSLVSTTEK-------------NSSTIRRLTFSEGGECL 337 (845)
Q Consensus 274 ~~~~I~slafSPdg~~~~~~lLatgs~D---G~I~IWDl~s~~~l~tl~g-------------h~~~VtslafSpdG~~L 337 (845)
+|++++.| +.|++||+.+++++..+.+ |...|.+++|+|++++|
T Consensus 247 --------------------~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 306 (397)
T 1sq9_A 247 --------------------LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL 306 (397)
T ss_dssp --------------------EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE
T ss_pred --------------------EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE
Confidence 99999999 9999999999999999998 99999999999999999
Q ss_pred EEEeCCC-EEEEEecCCceEEEec------CC---------------CCCeEEEEEc-CC----------ceEEEE----
Q psy467 338 LGGDTEG-LKVYGWEPARQYDAQP------MG---------------WGKVQDLAVT-GT----------QLWFRR---- 380 (845)
Q Consensus 338 asgs~DG-I~IWDl~tgk~l~tl~------~h---------------~~~VtsVafS-dg----------~lLaaS---- 380 (845)
++++.|+ |++||+.+++.+..+. +| ...|++++|+ ++ ++|+++
T Consensus 307 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg 386 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR 386 (397)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT
T ss_pred EEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC
Confidence 9999999 9999999999999998 88 8999999999 76 577766
Q ss_pred -EEEEeeC
Q psy467 381 -VGTWSHQ 387 (845)
Q Consensus 381 -VsiW~~d 387 (845)
|.+|.++
T Consensus 387 ~i~iw~~~ 394 (397)
T 1sq9_A 387 SIRWFREA 394 (397)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEcC
Confidence 9999764
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-33 Score=298.91 Aligned_cols=282 Identities=24% Similarity=0.343 Sum_probs=242.7
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC-----eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-----NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~-----~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
..+|+||.+.|++|+|+|+++++||||+.||+|+|||+.+. .+...+.+|...|.+++|+|++++|++++.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 45799999999999999966899999999999999998654 3567889999999999999999999999999999
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE-EEEcCCCCCeEEEEEecCC--CEEEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI-YTYRGHSKSINSIRFSPDG--QWIAS 159 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l-~~~~~h~~~V~sLafSPdg--~~Las 159 (845)
++|+............+...+..+.+++++++|++++.|+.+++||+...... ....+|...+.+++|++++ .++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 99999999888888888899999999999999999999999999999765443 3456788999999999864 57889
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
++.|+.|++ ||+.+++. +..+.+|... |
T Consensus 191 ~~~d~~i~i-------------~d~~~~~~--------------------~~~~~~h~~~-------v------------ 218 (340)
T 4aow_A 191 CGWDKLVKV-------------WNLANCKL--------------------KTNHIGHTGY-------L------------ 218 (340)
T ss_dssp EETTSCEEE-------------EETTTTEE--------------------EEEECCCSSC-------E------------
T ss_pred EcCCCEEEE-------------EECCCCce--------------------eeEecCCCCc-------E------------
Confidence 999999999 99998877 6666666655 5
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~ 319 (845)
.+++|+|++. +|++|+.||.|++||+.+.+++..+.
T Consensus 219 ---------------~~~~~s~~~~-----------------------------~l~s~s~Dg~i~iwd~~~~~~~~~~~ 254 (340)
T 4aow_A 219 ---------------NTVTVSPDGS-----------------------------LCASGGKDGQAMLWDLNEGKHLYTLD 254 (340)
T ss_dssp ---------------EEEEECTTSS-----------------------------EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ---------------EEEEECCCCC-----------------------------EEEEEeCCCeEEEEEeccCceeeeec
Confidence 5666666665 99999999999999999999999888
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe---------cCCCCCeEEEEEc-CCceEEEE-----EEE
Q psy467 320 KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ---------PMGWGKVQDLAVT-GTQLWFRR-----VGT 383 (845)
Q Consensus 320 gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl---------~~h~~~VtsVafS-dg~lLaaS-----Vsi 383 (845)
.+ ..|.+++|+|++.+++++ .|+ |++||++++..+..+ .+|...|++++|+ +|++|+++ |.+
T Consensus 255 ~~-~~v~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~i 332 (340)
T 4aow_A 255 GG-DIINALCFSPNRYWLCAA-TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 332 (340)
T ss_dssp CS-SCEEEEEECSSSSEEEEE-ETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CC-ceEEeeecCCCCceeecc-CCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 64 679999999998766555 567 999999988766554 3678899999999 99998887 999
Q ss_pred EeeC
Q psy467 384 WSHQ 387 (845)
Q Consensus 384 W~~d 387 (845)
|.+.
T Consensus 333 W~~~ 336 (340)
T 4aow_A 333 WQVT 336 (340)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 9754
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=315.42 Aligned_cols=244 Identities=22% Similarity=0.247 Sum_probs=209.8
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE----ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS----LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~----l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
.|...|.+++|+| + ..|++|+.||+|+|||+.+++.+.. +.+|...|++++|+|++++|++|+.|++|++||+.
T Consensus 80 ~~~~~v~~~~~s~-d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 80 QTEAGVADLTWVG-E-RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EESSCEEEEEEET-T-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ccCCCEEEEEEeC-C-CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 3567899999999 5 4788999999999999998875443 45899999999999999999999999999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEEEEEec-CCCEEEEEeCCC
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINSIRFSP-DGQWIASGGEDG 164 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~sLafSP-dg~~Lasgs~DG 164 (845)
+++++..+.+|...|.+++|++++ .+|++++.|++|++||++++++...+. .+...+.+++|+| ++++|++|+.||
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 999999999999999999999988 478999999999999999999888774 3556789999999 467899999999
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
.|++ ||+++++. +..+.+|... |
T Consensus 238 ~v~~-------------wd~~~~~~--------------------~~~~~~h~~~-------v----------------- 260 (344)
T 4gqb_B 238 TVSL-------------VDTKSTSC--------------------VLSSAVHSQC-------V----------------- 260 (344)
T ss_dssp EEEE-------------EESCC--C--------------------CEEEECCSSC-------E-----------------
T ss_pred cEEE-------------EECCCCcE--------------------EEEEcCCCCC-------E-----------------
Confidence 9999 99998887 6777777766 6
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~ 324 (845)
.+++|+|++. + +|++|+.|+.|+|||+.+++++ .+.+|.+.
T Consensus 261 ----------~~v~fsp~g~-----------------------~-----~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~ 301 (344)
T 4gqb_B 261 ----------TGLVFSPHSV-----------------------P-----FLASLSEDCSLAVLDSSLSELF-RSQAHRDF 301 (344)
T ss_dssp ----------EEEEECSSSS-----------------------C-----CEEEEETTSCEEEECTTCCEEE-EECCCSSC
T ss_pred ----------EEEEEccCCC-----------------------e-----EEEEEeCCCeEEEEECCCCcEE-EEcCCCCC
Confidence 6666776653 1 7999999999999999988765 57899999
Q ss_pred EEEEEEeCCCC-EEEEEeCCC-EEEEEecCCc
Q psy467 325 IRRLTFSEGGE-CLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 325 VtslafSpdG~-~Lasgs~DG-I~IWDl~tgk 354 (845)
|++++|+|+|+ +|++++.|+ |++|++.+..
T Consensus 302 V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 302 VRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99999999986 677999999 9999998754
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=300.40 Aligned_cols=278 Identities=18% Similarity=0.288 Sum_probs=239.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee---EEEec--CCCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC---IMSLS--GHSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~---i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
.....+|.+.|++++|+| ++++|++++ ||.|++|++.+++. +..+. +|...|.+++|+|++++|++++.||.|
T Consensus 44 ~~~~~~h~~~v~~~~~~~-~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 121 (337)
T 1gxr_A 44 QINTLNHGEVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL 121 (337)
T ss_dssp EEEEECCSSCCCEEEECS-SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE
T ss_pred cceeccCCCceEEEEEec-CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcE
Confidence 344558999999999999 999999998 99999999987653 33333 799999999999999999999999999
Q ss_pred EEEECCCCc--EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 83 KIWNLAVPT--VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 83 ~VWDl~tg~--~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
++||+.+++ ....+..|...|.+++|+|++++|++++.||.|++||+++++.+..+..|...+.+++|+|++++|+++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 201 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEE
Confidence 999999887 667778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
+.||.|++ ||+++++. +..+. +... +
T Consensus 202 ~~dg~i~~-------------~d~~~~~~--------------------~~~~~-~~~~-------v------------- 227 (337)
T 1gxr_A 202 GLDNTVRS-------------WDLREGRQ--------------------LQQHD-FTSQ-------I------------- 227 (337)
T ss_dssp ETTSEEEE-------------EETTTTEE--------------------EEEEE-CSSC-------E-------------
T ss_pred ecCCcEEE-------------EECCCCce--------------------Eeeec-CCCc-------e-------------
Confidence 99999999 99988766 33322 1122 2
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
..++|+|++. ++++++.|+.|++||+.+++.. .+..
T Consensus 228 --------------~~~~~s~~~~-----------------------------~l~~~~~~~~i~~~~~~~~~~~-~~~~ 263 (337)
T 1gxr_A 228 --------------FSLGYCPTGE-----------------------------WLAVGMESSNVEVLHVNKPDKY-QLHL 263 (337)
T ss_dssp --------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTSSCEE-EECC
T ss_pred --------------EEEEECCCCC-----------------------------EEEEEcCCCcEEEEECCCCCeE-EEcC
Confidence 4455555554 9999999999999999988754 6778
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
|...|.+++|+|++++|++++.|+ |++|++.+++.+... .|...|.+++|+ ++++|+++ +.+|.+
T Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999999999999999999999999 999999999887543 488999999999 88888877 889964
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=338.96 Aligned_cols=283 Identities=25% Similarity=0.367 Sum_probs=244.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-----CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-----SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-----~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
...+.+|.+.|+|++|+|+++++|++|+.|++|++|++.+ +.....+.+|...|.+++|+|++++|++|+.||+|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 4578999999999999996678999999999999999865 34567889999999999999999999999999999
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE---cCCCCCeEEEEEecCC--CEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY---RGHSKSINSIRFSPDG--QWI 157 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~---~~h~~~V~sLafSPdg--~~L 157 (845)
++||+.++..+..+.+|...|.+++|+|++++|++|+.|++|++||+......... .+|...|.+++|+|++ ..+
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 99999999999999999999999999999999999999999999998654333222 3588889999999986 689
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
++++.|+.|++ ||+++++. ...+.+|... |
T Consensus 535 ~s~s~d~~v~v-------------wd~~~~~~--------------------~~~~~~h~~~-------v---------- 564 (694)
T 3dm0_A 535 VSASWDKTVKV-------------WNLSNCKL--------------------RSTLAGHTGY-------V---------- 564 (694)
T ss_dssp EEEETTSCEEE-------------EETTTCCE--------------------EEEECCCSSC-------E----------
T ss_pred EEEeCCCeEEE-------------EECCCCcE--------------------EEEEcCCCCC-------E----------
Confidence 99999999999 99987776 6666666665 5
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t 317 (845)
.+++|+|++. +|++|+.||.|++||+.+++++..
T Consensus 565 -----------------~~v~~spdg~-----------------------------~l~sg~~Dg~i~iwd~~~~~~~~~ 598 (694)
T 3dm0_A 565 -----------------STVAVSPDGS-----------------------------LCASGGKDGVVLLWDLAEGKKLYS 598 (694)
T ss_dssp -----------------EEEEECTTSS-----------------------------EEEEEETTSBCEEEETTTTEEEEC
T ss_pred -----------------EEEEEeCCCC-----------------------------EEEEEeCCCeEEEEECCCCceEEE
Confidence 6666666666 999999999999999999999888
Q ss_pred ecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecCCC-------------------CCeEEEEEc-CCceE
Q psy467 318 TEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMGW-------------------GKVQDLAVT-GTQLW 377 (845)
Q Consensus 318 l~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~h~-------------------~~VtsVafS-dg~lL 377 (845)
+.. ...|.+++|+|++.+|++++.++|+|||+.+++++..+..+. ..+++++|+ +|++|
T Consensus 599 ~~~-~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l 677 (694)
T 3dm0_A 599 LEA-NSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL 677 (694)
T ss_dssp CBC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEE
T ss_pred ecC-CCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEE
Confidence 775 467999999999999998887779999999998887765432 137899999 99999
Q ss_pred EEE-----EEEEeeC
Q psy467 378 FRR-----VGTWSHQ 387 (845)
Q Consensus 378 aaS-----VsiW~~d 387 (845)
+++ |.+|.+.
T Consensus 678 ~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 678 FSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEETTSEEEEEEC-
T ss_pred EEEcCCCeEEEEecc
Confidence 888 9999764
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-34 Score=361.20 Aligned_cols=365 Identities=21% Similarity=0.323 Sum_probs=295.6
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC--CCCEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN--GEETL 73 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp--dg~~L 73 (845)
++++|+ +.++.+|.+.|.+++|+| ++++||+++.||.|++||+.+++.+..+.+|...|.+++|+| ++.++
T Consensus 638 ~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 716 (1249)
T 3sfz_A 638 TLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLL 716 (1249)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEE
T ss_pred eEEEEECCCCCEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEE
Confidence 467787 467899999999999999 999999999999999999999999999999999999999999 55689
Q ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-------------------
Q psy467 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC------------------- 134 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~------------------- 134 (845)
++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.++..
T Consensus 717 ~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1249)
T 3sfz_A 717 ATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPED 796 (1249)
T ss_dssp EEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------C
T ss_pred EEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999865432
Q ss_pred ------------------------------------------------------------------------------EE
Q psy467 135 ------------------------------------------------------------------------------IY 136 (845)
Q Consensus 135 ------------------------------------------------------------------------------l~ 136 (845)
+.
T Consensus 797 ~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~ 876 (1249)
T 3sfz_A 797 VEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVA 876 (1249)
T ss_dssp CCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEE
T ss_pred ccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceee
Confidence 22
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeee--------------------------------------------
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF-------------------------------------------- 172 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~-------------------------------------------- 172 (845)
.+.+|...|.+++|+|+|++|++++.||.+++|+.-
T Consensus 877 ~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1249)
T 3sfz_A 877 DCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQI 956 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCE
T ss_pred ecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceE
Confidence 234566778889999999999999999999987621
Q ss_pred ----------------------ccCCceeEEEECCCCccCCCC--CCCCCcceeecCCCCeEEEEecCCCCCccceeeEe
Q psy467 173 ----------------------HLTNTSIHVVDLSLVHPLGTP--PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVT 228 (845)
Q Consensus 173 ----------------------~~~~~~I~vWDl~tg~~l~~~--~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~ 228 (845)
...++.+.+||+.++...... +...+.+++|+|+++.+.+.. .++.+.+|
T Consensus 957 ~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~------~dg~i~vw 1030 (1249)
T 3sfz_A 957 DYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSS------EDSVIQVW 1030 (1249)
T ss_dssp EEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEEC------SSSBEEEE
T ss_pred EEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEc------CCCEEEEE
Confidence 124467888888887765443 366788999999998877632 22345566
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCCCCcC-------------CCCc----ccccccCceeEEEcCCCCccc
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN-------------RSGT----CVPVSVSRTSLSILPQSPMLC 291 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~-------------~~~~----~~~~~~~I~slafSPdg~~~~ 291 (845)
++........ .........+.|++++... ..+. ...+...|.+++|+|+++
T Consensus 1031 d~~~~~~~~~---------~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~--- 1098 (1249)
T 3sfz_A 1031 NWQTGDYVFL---------QAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDAT--- 1098 (1249)
T ss_dssp ETTTTEEECC---------BCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSS---
T ss_pred ECCCCceEEE---------ecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCC---
Confidence 5544322111 1112223556666654421 1111 223567889999999999
Q ss_pred ceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe---------cC
Q psy467 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ---------PM 361 (845)
Q Consensus 292 ~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl---------~~ 361 (845)
++++++.||.|++||+.+++++..+.+|.+.|++++|+|+|++|++|+.|| |++||+.+++.+..+ ..
T Consensus 1099 --~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 1176 (1249)
T 3sfz_A 1099 --KFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTAT 1176 (1249)
T ss_dssp --SCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------
T ss_pred --EEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccc
Confidence 899999999999999999999999999999999999999999999999999 999999999877665 67
Q ss_pred CCCCeEEEEEc-CCceEEEE---EEEEeeC
Q psy467 362 GWGKVQDLAVT-GTQLWFRR---VGTWSHQ 387 (845)
Q Consensus 362 h~~~VtsVafS-dg~lLaaS---VsiW~~d 387 (845)
|.+.|++++|+ +|++++++ +.+|...
T Consensus 1177 ~~~~v~~l~fs~dg~~l~s~~g~v~vwd~~ 1206 (1249)
T 3sfz_A 1177 HGGWVTDVCFSPDSKTLVSAGGYLKWWNVA 1206 (1249)
T ss_dssp CCSCCCEEEECTTSSCEEEESSSEEEBCSS
T ss_pred cCceEEEEEECCCCCEEEECCCeEEEEECC
Confidence 88999999999 99999887 9999764
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-33 Score=295.30 Aligned_cols=279 Identities=16% Similarity=0.210 Sum_probs=243.8
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
...+.+.+|.+.|++++| + ++++|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.||.|++|
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 456789999999999999 7 89999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCC---cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec-CCCEEEEEe
Q psy467 86 NLAVP---TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGG 161 (845)
Q Consensus 86 Dl~tg---~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP-dg~~Lasgs 161 (845)
++... +.+..+..|...|.+++| +++++++++.||.|++|| .+..+..+..|...+.+++|+| +++++++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 162 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTAS 162 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEE
T ss_pred EeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEE
Confidence 98764 567788889999999999 577999999999999999 6788888999999999999998 899999999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec-CCCCCccceeeEeeecccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK-GRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~-h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
.||.+++ ||.. +. ...+.. +..
T Consensus 163 ~d~~i~i-------------~d~~--~~--------------------~~~~~~~~~~---------------------- 185 (313)
T 3odt_A 163 ADKTIKL-------------WQND--KV--------------------IKTFSGIHND---------------------- 185 (313)
T ss_dssp TTSCEEE-------------EETT--EE--------------------EEEECSSCSS----------------------
T ss_pred CCCCEEE-------------EecC--ce--------------------EEEEeccCcc----------------------
Confidence 9999999 9832 22 233322 222
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
.+.+++|+|++ .+++++.||.|++||+++++++..+.+
T Consensus 186 ------------------------------------~i~~~~~~~~~------~~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 186 ------------------------------------VVRHLAVVDDG------HFISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp ------------------------------------CEEEEEEEETT------EEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ------------------------------------cEEEEEEcCCC------eEEEccCCCeEEEEECCchhhhhhhhc
Confidence 23444444444 378899999999999999999999999
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE----EEEEeeCCCC
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQDSG 390 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d~~~ 390 (845)
|...|++++|+|+| .|++++.|+ |++||+.+++.+..+..|...|++++|+ ++++++++ |.+|..+...
T Consensus 224 ~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 224 HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGG
T ss_pred CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCc
Confidence 99999999999999 588999999 9999999999999999999999999999 88877766 9999876543
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=302.62 Aligned_cols=254 Identities=18% Similarity=0.352 Sum_probs=227.8
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
++++|+ ++.+.+|...|.+++|+| ++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 114 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLS 114 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred cEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEE
Confidence 467887 467889999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred EECCCcEEEEECCCC-cEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEc-CCCCCeEEEEEec
Q psy467 76 GCQSGSIKIWNLAVP-TVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYR-GHSKSINSIRFSP 152 (845)
Q Consensus 76 gs~DGtV~VWDl~tg-~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~-~h~~~V~sLafSP 152 (845)
|+.|++|++||++++ .....+.+|...|.+++|+| ++.+|++|+.|+.|++||++++.....+. .+...+..++|+|
T Consensus 115 gs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 194 (304)
T 2ynn_A 115 GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYP 194 (304)
T ss_dssp EETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECC
T ss_pred ECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEE
Confidence 999999999999987 55677889999999999999 67899999999999999998877666554 4567899999987
Q ss_pred --CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 153 --DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 153 --dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
++.+|++++.|+.|++ ||++++++ +..+.+|... +
T Consensus 195 ~~~~~~l~s~s~D~~i~i-------------Wd~~~~~~--------------------~~~~~~h~~~-------v--- 231 (304)
T 2ynn_A 195 LPDKPYMITASDDLTIKI-------------WDYQTKSC--------------------VATLEGHMSN-------V--- 231 (304)
T ss_dssp STTCCEEEEEETTSEEEE-------------EETTTTEE--------------------EEEEECCSSC-------E---
T ss_pred cCCCCEEEEEcCCCeEEE-------------EeCCCCcc--------------------ceeeCCCCCC-------E---
Confidence 7789999999999999 99998887 7778888776 6
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
..++|+|++. +|++|+.||.|++||+.
T Consensus 232 ------------------------~~~~~~p~~~-----------------------------~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 232 ------------------------SFAVFHPTLP-----------------------------IIISGSEDGTLKIWNSS 258 (304)
T ss_dssp ------------------------EEEEECSSSS-----------------------------EEEEEETTSCEEEEETT
T ss_pred ------------------------EEEEECCCCC-----------------------------EEEEEcCCCeEEEEECC
Confidence 6677777776 99999999999999999
Q ss_pred CCeEEEEecCCCCCEEEEEEeCCCC--EEEEEeCCCEEEEEecC
Q psy467 311 KFSLVSTTEKNSSTIRRLTFSEGGE--CLLGGDTEGLKVYGWEP 352 (845)
Q Consensus 311 s~~~l~tl~gh~~~VtslafSpdG~--~Lasgs~DGI~IWDl~t 352 (845)
+++++.++..|...+.+++|+|++. ++++|+.||+.+|++..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 259 TYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp TCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred CCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 9999999999999999999999875 68999988888888764
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=306.60 Aligned_cols=298 Identities=15% Similarity=0.182 Sum_probs=239.8
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe--eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.+..|.+.|++++|+| ++++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus 3 ~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EEESCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred eecccCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 3556999999999999 99999999999999999999887 88899999999999999999999999999999999999
Q ss_pred CCCcEEEEE--cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce---EEE-EcCCCCCeEEEEEecCCCEEEEEe
Q psy467 88 AVPTVQRTL--NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC---IYT-YRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 88 ~tg~~v~~l--~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~---l~~-~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
.+++....+ ..|...|.+++|+|++++|++++.||.|++||++.+.. ... ...|...|.+++|+|++++|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 988755443 66889999999999999999999999999999987762 333 356889999999999999999999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
.||.|++ ||+............. .. .-.+.+..+..+..|
T Consensus 162 ~dg~i~~-------------~d~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~------------------------- 201 (372)
T 1k8k_C 162 CDFKCRI-------------FSAYIKEVEERPAPTP-WG-SKMPFGELMFESSSS------------------------- 201 (372)
T ss_dssp TTSCEEE-------------EECCCTTTSCCCCCBT-TB-SCCCTTCEEEECCCC-------------------------
T ss_pred CCCCEEE-------------EEcccccccccccccc-cc-cccchhhheEecCCC-------------------------
Confidence 9999999 9987544311100000 00 000011112222222
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN 321 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh 321 (845)
...+.+++|+|+++ +|++++.|+.|++||+++++++..+..|
T Consensus 202 ---------------------------------~~~v~~~~~~~~~~-----~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 202 ---------------------------------CGWVHGVCFSANGS-----RVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp ---------------------------------SSCEEEEEECSSSS-----EEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred ---------------------------------CCeEEEEEECCCCC-----EEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 23456666666666 9999999999999999999999999999
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC--Cce--------------------------------E------EEe-
Q psy467 322 SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP--ARQ--------------------------------Y------DAQ- 359 (845)
Q Consensus 322 ~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t--gk~--------------------------------l------~tl- 359 (845)
...|.+++|+|++++|++| .|+ |++|++.+ ++. . ..+
T Consensus 244 ~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (372)
T 1k8k_C 244 TLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD 322 (372)
T ss_dssp SCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCS
T ss_pred CCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccc
Confidence 9999999999999999888 777 99999988 421 0 223
Q ss_pred cCCCCCeEEEEEc--CC---ceEEEE-----EEEEeeC
Q psy467 360 PMGWGKVQDLAVT--GT---QLWFRR-----VGTWSHQ 387 (845)
Q Consensus 360 ~~h~~~VtsVafS--dg---~lLaaS-----VsiW~~d 387 (845)
.+|.+.|++++|+ +| .+|+++ |.+|.++
T Consensus 323 ~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 323 SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp SSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 4899999999977 55 777777 9999763
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=302.54 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=220.9
Q ss_pred cceeeee-----------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCC
Q psy467 2 RAKVEKA-----------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~l-----------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg 70 (845)
++++|++ +.|.+|...|.+++|+| ++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++
T Consensus 41 ~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~ 119 (319)
T 3frx_A 41 TLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA 119 (319)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred cEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC
Confidence 4677864 46889999999999999 99999999999999999999999999999999999999999999
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccC------CCEEEEEECCCeEEEEECCCCceEEEEcCCCCC
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPY------GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS 144 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspd------g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~ 144 (845)
.+|++|+.|++|++||+. +..+..+.+|...|.+++|+|. +..|++++.|+.|++||+++.+....+.+|...
T Consensus 120 ~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~ 198 (319)
T 3frx_A 120 SMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN 198 (319)
T ss_dssp CEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC
T ss_pred CEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCc
Confidence 999999999999999997 5677888899999999999985 448999999999999999999999999999999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 145 INSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
|.+++|+|++++|++++.||.|++ ||+.+++. +..+..+ ..
T Consensus 199 v~~~~~sp~g~~l~s~~~dg~i~i-------------wd~~~~~~--------------------~~~~~~~-~~----- 239 (319)
T 3frx_A 199 INTLTASPDGTLIASAGKDGEIML-------------WNLAAKKA--------------------MYTLSAQ-DE----- 239 (319)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEE-------------EETTTTEE--------------------EEEEECC-SC-----
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEE-------------EECCCCcE--------------------EEEecCC-Cc-----
Confidence 999999999999999999999999 99998776 4444332 12
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ ..++|+|++. ++++++. +.+
T Consensus 240 --v---------------------------~~~~~sp~~~-----------------------------~la~~~~-~~i 260 (319)
T 3frx_A 240 --V---------------------------FSLAFSPNRY-----------------------------WLAAATA-TGI 260 (319)
T ss_dssp --E---------------------------EEEEECSSSS-----------------------------EEEEEET-TEE
T ss_pred --E---------------------------EEEEEcCCCC-----------------------------EEEEEcC-CCc
Confidence 3 4555555555 8888765 569
Q ss_pred EEEECCCCeEEEEecC--------CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 305 NFWDLEKFSLVSTTEK--------NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~g--------h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
++|++.....+..+.. |...+.+++|+|||++|++|+.|+ |+|||+.++
T Consensus 261 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 261 KVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 9999998887777653 356799999999999999999999 999999764
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-33 Score=337.41 Aligned_cols=289 Identities=22% Similarity=0.328 Sum_probs=256.7
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
++...+.|.+|.+.|++++|+| ++++||+|+.||.|+|||+.+++.+..+.+|...|.+++|+|++++|++|+.||.|+
T Consensus 2 ~l~~~~~~~~h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 2 KLDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp CCCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred CcccceeeecCCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 3445678999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEec-CCCEEEEEe
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGG 161 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSP-dg~~Lasgs 161 (845)
+||+.+++.+..+.+|...|++++|+|++++|++++.||.|++||+.++ .....+.+|...|.+++|+| +++.|++++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 9999999999999999999999999999999999999999999999886 67788888999999999999 889999999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC-CCCccceeeEeeecccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR-PGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~-~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
.||.|++ ||+.++.. ...+..+. .. +
T Consensus 161 ~dg~v~v-------------wd~~~~~~--------------------~~~~~~~~~~~-------v------------- 187 (814)
T 3mkq_A 161 LDRTVKV-------------WSLGQSTP--------------------NFTLTTGQERG-------V------------- 187 (814)
T ss_dssp TTSEEEE-------------EETTCSSC--------------------SEEEECCCTTC-------C-------------
T ss_pred CCCeEEE-------------EECCCCcc--------------------eeEEecCCCCC-------E-------------
Confidence 9999999 99987665 33332222 22 2
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
..++|+|.. ++. ++++++.||.|++||+.+++++..+.+
T Consensus 188 --------------~~~~~~~~~----------------------~~~-----~l~~~~~dg~i~~~d~~~~~~~~~~~~ 226 (814)
T 3mkq_A 188 --------------NYVDYYPLP----------------------DKP-----YMITASDDLTIKIWDYQTKSCVATLEG 226 (814)
T ss_dssp --------------CEEEECCST----------------------TCC-----EEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred --------------EEEEEEECC----------------------CCC-----EEEEEeCCCEEEEEECCCCcEEEEEcC
Confidence 445555510 344 999999999999999999999999999
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCc--eEEEE----EEEEeeC
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQ--LWFRR----VGTWSHQ 387 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~--lLaaS----VsiW~~d 387 (845)
|...|++++|+|+|++|++++.|| |++||+.+++.+..+..|...|++++|+ +++ +++++ +.+|...
T Consensus 227 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 227 HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence 999999999999999999999999 9999999999999999999999999999 766 45555 7777653
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=315.93 Aligned_cols=298 Identities=15% Similarity=0.132 Sum_probs=253.7
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
.+++++|+| ++++|++++.||.|++||+.+++....+..| ..+....|++++++|++|+.||.|++||+.+++....+
T Consensus 58 ~~~~~~~s~-~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 58 AGKGNTFEK-VGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CCTTCEEEE-EETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred cccceeeee-cCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec
Confidence 355899999 9999999999999999999887776666655 44555578999999999999999999999999988888
Q ss_pred cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCC
Q psy467 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN 176 (845)
Q Consensus 97 ~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~ 176 (845)
.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i-------- 207 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL-------- 207 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE--------
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE--------
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCcee
Q psy467 177 TSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYS 256 (845)
Q Consensus 177 ~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (845)
||+++++. +..+..+.... -.+ ..
T Consensus 208 -----wd~~~~~~--------------------~~~~~~~~~~~----~~v---------------------------~~ 231 (420)
T 3vl1_A 208 -----WECGTGTT--------------------IHTFNRKENPH----DGV---------------------------NS 231 (420)
T ss_dssp -----EETTTTEE--------------------EEEECBTTBTT----CCE---------------------------EE
T ss_pred -----eECCCCce--------------------eEEeecCCCCC----CCc---------------------------cE
Confidence 99998887 55555432210 003 56
Q ss_pred EEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec-CCCCCEEEEEEeCCCC
Q psy467 257 AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE-KNSSTIRRLTFSEGGE 335 (845)
Q Consensus 257 l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~-gh~~~VtslafSpdG~ 335 (845)
+.+.+.+.. .........+.+++|+|+++ +|++|+.||.|++||+++++.+..+. .|...|++++|+|+++
T Consensus 232 ~~~~~~~~~---~~~~~~~~~v~~~~~s~~~~-----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (420)
T 3vl1_A 232 IALFVGTDR---QLHEISTSKKNNLEFGTYGK-----YVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNA 303 (420)
T ss_dssp EEEEECCCS---SCGGGCCCCCCTTCSSCTTE-----EEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCT
T ss_pred EEEecCCcc---eeeecccCcccceEEcCCCC-----EEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCC
Confidence 667665541 12223356788999999998 99999999999999999998877775 4788999999999999
Q ss_pred -EEEEEeCCC-EEEEEecCCce-EEEecC-CCCCeEEEEEcCCceEEEE-----EEEEeeCC
Q psy467 336 -CLLGGDTEG-LKVYGWEPARQ-YDAQPM-GWGKVQDLAVTGTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 336 -~Lasgs~DG-I~IWDl~tgk~-l~tl~~-h~~~VtsVafSdg~lLaaS-----VsiW~~d~ 388 (845)
+|++|+.|| |++||+.+++. +..+.. |...|+++.|.++++|+++ |.+|.+..
T Consensus 304 ~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 304 NYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp TEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred CEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 999999999 99999998754 677766 6778999977788888887 99998754
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-33 Score=306.37 Aligned_cols=277 Identities=19% Similarity=0.305 Sum_probs=217.1
Q ss_pred cceeeeeE---------EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC--eeEEEecCCCCCeEEEEEcCCC
Q psy467 2 RAKVEKAE---------DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS--NCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~l~---------~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~i~~l~~h~~~V~sLafSpdg 70 (845)
++++|++. ...+|.+.|.+++|+| ++++||+|+.|++|+||++..+ +.+..+.+|...|.+++|+|++
T Consensus 39 ~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 117 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG 117 (345)
T ss_dssp CEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS
T ss_pred eEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC
Confidence 47888753 2368999999999999 9999999999999999998766 4678899999999999999999
Q ss_pred CEEEEEECCCcEEEEECCCC---cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCCe
Q psy467 71 ETLSAGCQSGSIKIWNLAVP---TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSI 145 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg---~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~V 145 (845)
++|++|+.|++|++||+.++ ..+..+.+|...|.+++|+|++++|++++.|+.|++||++++. +...+.+|...|
T Consensus 118 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v 197 (345)
T 3fm0_A 118 NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTV 197 (345)
T ss_dssp SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCce
Confidence 99999999999999999876 3466788899999999999999999999999999999998775 457788999999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
.+++|+|+|++|++++.|+.|++ ||.......... ......+....+..+.+
T Consensus 198 ~~l~~sp~g~~l~s~s~D~~v~i-------------W~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---------- 249 (345)
T 3fm0_A 198 WSLAFDPSGQRLASCSDDRTVRI-------------WRQYLPGNEQGV-----ACSGSDPSWKCICTLSG---------- 249 (345)
T ss_dssp EEEEECTTSSEEEEEETTSCEEE-------------EEEECTTCTTCC-----CCC---CEEEEEEEECS----------
T ss_pred EEEEECCCCCEEEEEeCCCeEEE-------------eccccCCCCccc-----eeeccCCccceeEEecC----------
Confidence 99999999999999999999999 986433220000 00000000000111110
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
.+...|.+++|+|++. .|++++.|+.|+
T Consensus 250 -----------------------------------------------~h~~~v~~v~~~~~~~-----~l~s~~~d~~i~ 277 (345)
T 3fm0_A 250 -----------------------------------------------FHSRTIYDIAWCQLTG-----ALATACGDDAIR 277 (345)
T ss_dssp -----------------------------------------------SCSSCEEEEEECTTTC-----CEEEEETTSCEE
T ss_pred -----------------------------------------------CCCCcEEEEEEecCCC-----EEEEEeCCCeEE
Confidence 0224566777777777 899999999999
Q ss_pred EEECCCCe---------EEEEecCCCCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 306 FWDLEKFS---------LVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 306 IWDl~s~~---------~l~tl~gh~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
+|+..... ......+|...|++++|+|++ .+||+|+.|| |++|++.+++....+
T Consensus 278 vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 278 VFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp EEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 99986542 223346899999999999998 5999999999 999999987765443
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=308.61 Aligned_cols=284 Identities=13% Similarity=0.171 Sum_probs=233.4
Q ss_pred eeEEeccCCCcEEEEEEecCCC-CEEEEEeCCCeEEEEECCCCeeEEEec--CCCCCeEEEEEcC-CCCEEEEEECCCcE
Q psy467 7 KAEDFMAHGASVNCLALGKKSG-QVLATGGDDKKVNLWALGKSNCIMSLS--GHSTPVESVQFGN-GEETLSAGCQSGSI 82 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg-~~LaTgs~DG~I~IWdl~t~~~i~~l~--~h~~~V~sLafSp-dg~~LaSgs~DGtV 82 (845)
..+.+.+|.+.|++++|+| ++ ++|++|+.||.|+|||+.+++....+. +|...|.+++|+| ++++|++++.|+.|
T Consensus 65 ~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHP-THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEECCCSSCEEEEEECS-SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred eEEeccCCCCCEEEEEECC-CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 3568899999999999999 77 999999999999999999888777765 6999999999999 78999999999999
Q ss_pred EEEECCCCcEEEEEcCC---CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCC-EEE
Q psy467 83 KIWNLAVPTVQRTLNGH---KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ-WIA 158 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h---~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~-~La 158 (845)
++||+.+ ..+..+..+ ...|.+++|+|++++|++++.||.|++||+ +++.+..+..|...|.+++|+|+++ +|+
T Consensus 144 ~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 144 TLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp EEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred EEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 9999996 555555433 478999999999999999999999999999 5788899999999999999999998 999
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+++.|+.|++ ||+++++.. +..+..+ +|... +
T Consensus 222 s~~~d~~i~i-------------wd~~~~~~~----------------~~~~~~~-~~~~~-------v----------- 253 (383)
T 3ei3_B 222 TSSVDATVKL-------------WDLRNIKDK----------------NSYIAEM-PHEKP-------V----------- 253 (383)
T ss_dssp EEETTSEEEE-------------EEGGGCCST----------------TCEEEEE-ECSSC-------E-----------
T ss_pred EEeCCCEEEE-------------EeCCCCCcc----------------cceEEEe-cCCCc-------e-----------
Confidence 9999999999 999874430 1113322 33333 3
Q ss_pred cccchhhhhhccCCCceeEEEcC-CCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE
Q psy467 239 QAGEEELFATIANPCDYSAIFQP-HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fsp-dg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t 317 (845)
.+++|+| ++. +|++++.|+.|++||+++++.+..
T Consensus 254 ----------------~~~~~s~~~~~-----------------------------~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 254 ----------------NAAYFNPTDST-----------------------------KLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp ----------------EEEEECTTTSC-----------------------------EEEEEESSSEEEEEETTBTTSCSE
T ss_pred ----------------EEEEEcCCCCC-----------------------------EEEEEcCCCcEEEEECCCCccccc
Confidence 4455555 444 999999999999999998877666
Q ss_pred ecCCC-----------------CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC--CCCCeEEEEEc-CCce
Q psy467 318 TEKNS-----------------STIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM--GWGKVQDLAVT-GTQL 376 (845)
Q Consensus 318 l~gh~-----------------~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~--h~~~VtsVafS-dg~l 376 (845)
+.+|. +.+..++|+|+|++ +++.|+ |+|||+.+++++..+.+ |...+..++|+ ++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~ 366 (383)
T 3ei3_B 289 IIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDV 366 (383)
T ss_dssp EEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSE
T ss_pred cccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccE
Confidence 65442 33445666666666 667888 99999999999999987 45778888999 9999
Q ss_pred EEEE----EEEEeeCC
Q psy467 377 WFRR----VGTWSHQD 388 (845)
Q Consensus 377 LaaS----VsiW~~d~ 388 (845)
|+++ |.+|.++.
T Consensus 367 l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 367 LASGMGFNILIWNRED 382 (383)
T ss_dssp EEEEETTEEEEEECC-
T ss_pred EEEecCCcEEEEecCC
Confidence 8887 99997653
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-34 Score=308.33 Aligned_cols=308 Identities=17% Similarity=0.234 Sum_probs=246.5
Q ss_pred EeccCCCcEEEEEEecC---CCCEEEEEeCCCeEEEEECCCCeeEEEecC-----CCCCeEEEEEcCC----CCEEEEEE
Q psy467 10 DFMAHGASVNCLALGKK---SGQVLATGGDDKKVNLWALGKSNCIMSLSG-----HSTPVESVQFGNG----EETLSAGC 77 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~---dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-----h~~~V~sLafSpd----g~~LaSgs 77 (845)
...+|.+.|++++|+|. ....+++++.++.|++|++.+++.+..+.. |...|.+++|+|+ +.+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999983 345666666677999999998877766653 5678999999998 67999999
Q ss_pred CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEE---cCCCCCeEEEEEecC
Q psy467 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTY---RGHSKSINSIRFSPD 153 (845)
Q Consensus 78 ~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~---~~h~~~V~sLafSPd 153 (845)
.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++.+..+ ..|...|.+++|+|+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 999999999999999999999999999999999 8999999999999999999999999888 679999999999999
Q ss_pred CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccc
Q psy467 154 GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEEN 233 (845)
Q Consensus 154 g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~ 233 (845)
+++|++++.||.|++ ||+++++...... ..+.+++++..+.....
T Consensus 173 ~~~l~~~~~dg~i~i-------------~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~------------------ 217 (366)
T 3k26_A 173 GEKIMSCGMDHSLKL-------------WRINSKRMMNAIK----ESYDYNPNKTNRPFISQ------------------ 217 (366)
T ss_dssp SSEEEEEETTSCEEE-------------EESCSHHHHHHHH----HHHTCCGGGCSSCCCCE------------------
T ss_pred CCEEEEecCCCCEEE-------------EECCCCccccccc----eeEEecCCCCcccccce------------------
Confidence 999999999999999 9998876521110 01222232221111000
Q ss_pred ccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe
Q psy467 234 AESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS 313 (845)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~ 313 (845)
....+. ......+...|.+++|+ ++ ++++++.|+.|++||+.++.
T Consensus 218 -----------------------~~~~~~-----~~~~~~~~~~v~~~~~~--~~-----~l~~~~~d~~i~~wd~~~~~ 262 (366)
T 3k26_A 218 -----------------------KIHFPD-----FSTRDIHRNYVDCVRWL--GD-----LILSKSCENAIVCWKPGKME 262 (366)
T ss_dssp -----------------------EECCCS-----EEECSSCSSCCCEEEEE--TT-----EEEEECSSSEEEEEEESSTT
T ss_pred -----------------------eeccCc-----cccccCCcceEEEEEEc--CC-----EEEEEecCCEEEEEeCCCcc
Confidence 000000 00011234567888887 44 89999999999999998763
Q ss_pred --------------EEEEecCCCCCEEEEEEeCC--CCEEEEEeCCC-EEEEEecCCce----EEEecCC--CCCeEEEE
Q psy467 314 --------------LVSTTEKNSSTIRRLTFSEG--GECLLGGDTEG-LKVYGWEPARQ----YDAQPMG--WGKVQDLA 370 (845)
Q Consensus 314 --------------~l~tl~gh~~~VtslafSpd--G~~Lasgs~DG-I~IWDl~tgk~----l~tl~~h--~~~VtsVa 370 (845)
.+..+.+|...|++++|+|+ |++|++|+.|| |++||+.+++. ...+..| ...|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 342 (366)
T 3k26_A 263 DDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTS 342 (366)
T ss_dssp CCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEE
T ss_pred ccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEE
Confidence 48888899999999999999 99999999999 99999998753 4477777 78999999
Q ss_pred Ec-CCceEEEE-----EEEEeeC
Q psy467 371 VT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 371 fS-dg~lLaaS-----VsiW~~d 387 (845)
|+ ++++|+++ |.+|.+.
T Consensus 343 ~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 343 FSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC-
T ss_pred eCCCCCeEEEEeCCCEEEEEEec
Confidence 99 89888887 8999753
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-33 Score=322.82 Aligned_cols=352 Identities=14% Similarity=0.172 Sum_probs=268.6
Q ss_pred eEEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEEEecCCCC---CeEEEEEcCC-CCEEEEEECCCcE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHST---PVESVQFGNG-EETLSAGCQSGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~---~V~sLafSpd-g~~LaSgs~DGtV 82 (845)
+..+.+|.+.|.+++|+| ++. ++++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|++++.||.|
T Consensus 153 ~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 231 (615)
T 1pgu_A 153 LGEVSGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI 231 (615)
T ss_dssp EEECCSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCE
T ss_pred ceeeecCCccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeE
Confidence 567889999999999999 666 899999999999999999999999999999 9999999999 9999999999999
Q ss_pred EEEECCCCcEEEEE-c---CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCC----CCCeEEEEEecCC
Q psy467 83 KIWNLAVPTVQRTL-N---GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH----SKSINSIRFSPDG 154 (845)
Q Consensus 83 ~VWDl~tg~~v~~l-~---~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h----~~~V~sLafSPdg 154 (845)
++||+.+++.+..+ . .|...|.+++|+ ++++|++++.||.|++||+++++.+..+..+ ...+.++.|+ ++
T Consensus 232 ~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 309 (615)
T 1pgu_A 232 SCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GN 309 (615)
T ss_dssp EEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ET
T ss_pred EEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CC
Confidence 99999999999999 5 799999999999 9999999999999999999999999888866 3678888886 89
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--CCCCCcceeecCC--------------------------
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--PPQYTSSVPFSHN-------------------------- 206 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--~~~~i~svs~spd-------------------------- 206 (845)
+++++++.||.|++ ||+.+++.+..+ +...+.+++| |+
T Consensus 310 ~~l~~~~~~g~i~~-------------~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v 375 (615)
T 1pgu_A 310 GRIISLSLDGTLNF-------------YELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLI 375 (615)
T ss_dssp TEEEEEETTSCEEE-------------EETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCE
T ss_pred CeEEEEECCCCEEE-------------EECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCce
Confidence 99999999999999 666554433222 1333444444 33
Q ss_pred -------CCeEEEEecCCCCCccceeeEeeeccccccc---------c-------cccchhhhhh---------ccCCCc
Q psy467 207 -------TSLRKSFTKGRPGGTKAKIDVTRIEENAESE---------D-------QAGEEELFAT---------IANPCD 254 (845)
Q Consensus 207 -------g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~---------~-------~~~~~~l~~~---------~~~~~~ 254 (845)
+..+.... ....+.+|++....... + ......++.. ......
T Consensus 376 ~~~~~~~~~~l~~~~------~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (615)
T 1pgu_A 376 VSLDNSKAQEYSSIS------WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPG 449 (615)
T ss_dssp EEEECCSTTCCEEEE------TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE
T ss_pred EEEEECCCcEEEEEe------CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCc
Confidence 22222111 11222333332211000 0 0000000000 001111
Q ss_pred eeEEEc--------C-CCCcC----CC-----CcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE
Q psy467 255 YSAIFQ--------P-HRSLN----RS-----GTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316 (845)
Q Consensus 255 ~~l~fs--------p-dg~~~----~~-----~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~ 316 (845)
.+++|+ . ++... .. .....+...|++++|+|+++ +|++++.||.|++||+.+++++.
T Consensus 450 ~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-----~l~~~~~dg~i~iw~~~~~~~~~ 524 (615)
T 1pgu_A 450 SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET-----YIAAGDVMGKILLYDLQSREVKT 524 (615)
T ss_dssp EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS-----EEEEEETTSCEEEEETTTTEEEE
T ss_pred eEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC-----EEEEcCCCCeEEEeeCCCCccee
Confidence 222222 1 11100 00 22234567899999999999 99999999999999999999999
Q ss_pred EecC-CCCCEEEEEEeC----------CCCEEEEEeCCC-EEEEEecCC-ceEEEecCCCCCeEEEEEc-CCceEEEE--
Q psy467 317 TTEK-NSSTIRRLTFSE----------GGECLLGGDTEG-LKVYGWEPA-RQYDAQPMGWGKVQDLAVT-GTQLWFRR-- 380 (845)
Q Consensus 317 tl~g-h~~~VtslafSp----------dG~~Lasgs~DG-I~IWDl~tg-k~l~tl~~h~~~VtsVafS-dg~lLaaS-- 380 (845)
.+.+ |...|++++|+| ++++|++++.|+ |++||+.++ +++..+.+|...|++++|+ +++ |+++
T Consensus 525 ~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~ 603 (615)
T 1pgu_A 525 SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGA 603 (615)
T ss_dssp CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEET
T ss_pred EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecC
Confidence 9988 999999999999 999999999999 999999998 7889999999999999999 888 6555
Q ss_pred ---EEEEeeCC
Q psy467 381 ---VGTWSHQD 388 (845)
Q Consensus 381 ---VsiW~~d~ 388 (845)
|.+|.++.
T Consensus 604 d~~v~iw~~~~ 614 (615)
T 1pgu_A 604 DACIKRWNVVL 614 (615)
T ss_dssp TSCEEEEEEC-
T ss_pred CceEEEEeeec
Confidence 99998753
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-33 Score=351.98 Aligned_cols=322 Identities=20% Similarity=0.297 Sum_probs=267.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
..+.+|.+.|++++|+| +|++||+|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.
T Consensus 609 ~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp EEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEecccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 46789999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
+++.+..+.+|...|.+++|+| ++.++++|+.||.|++||+.+++++..+.+|...|.+++|+|+++++++++.||.|
T Consensus 688 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 688 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEE
T ss_pred CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeE
Confidence 9999999999999999999999 45689999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCC---------------CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTP---------------PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~---------------~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++ ||+.++...... ....+.+++|+|+|+.+...... .+.+|++.
T Consensus 768 ~v-------------wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~-------~v~~~d~~ 827 (1249)
T 3sfz_A 768 RL-------------WDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN-------KVLLFDIH 827 (1249)
T ss_dssp EE-------------EEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT-------EEEEEETT
T ss_pred EE-------------EeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC-------cEEEEEec
Confidence 99 998776542211 12367789999999987765421 12232221
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
... ....+. ..+...+.+++|+|+++ ++++++.||.|++||+.+
T Consensus 828 ~~~--------------------~~~~~~-----------~~~~~~v~~~~~sp~~~-----~l~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 828 TSG--------------------LLAEIH-----------TGHHSTIQYCDFSPYDH-----LAVIALSQYCVELWNIDS 871 (1249)
T ss_dssp TCC--------------------EEEEEE-----------CSSSSCCCEEEECSSTT-----EEEEECSSSCEEEEETTT
T ss_pred CCC--------------------ceeEEc-----------CCCCCceEEEEEcCCCC-----EEEEEeCCCeEEEEEcCC
Confidence 110 001111 12346788999999998 999999999999999999
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce-----------------------------EEE---
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ-----------------------------YDA--- 358 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~-----------------------------l~t--- 358 (845)
+..+..+.+|...|++++|+|+|++|++++.|+ |++|++.+... +..
T Consensus 872 ~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 951 (1249)
T 3sfz_A 872 RLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAG 951 (1249)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEE
T ss_pred CceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEec
Confidence 999999999999999999999999999999999 99999653100 000
Q ss_pred -----ecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 359 -----QPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 359 -----l~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
...+...+++++|+ ++++++++ +.+|...
T Consensus 952 ~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~ 991 (1249)
T 3sfz_A 952 KTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELP 991 (1249)
T ss_dssp SSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETT
T ss_pred CcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcC
Confidence 01134568888888 78877777 7788654
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-33 Score=305.47 Aligned_cols=253 Identities=24% Similarity=0.403 Sum_probs=222.8
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC------eeEEEecCCCCCeEEEEEcCC
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS------NCIMSLSGHSTPVESVQFGNG 69 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~------~~i~~l~~h~~~V~sLafSpd 69 (845)
++++|+ .+.+..|...|.+++|+| +|.+||+|+.|+.+++|++... .....+.+|...|.+++|+|+
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp-~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 165 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPCTWVMACAYAP-SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNS 165 (354)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCEEEECT-TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSS
T ss_pred eEEEEECCCCCcceEEecCCCCEEEEEECC-CCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCC
Confidence 467886 467888999999999999 9999999999999999998543 345667789999999999999
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEE
Q psy467 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147 (845)
Q Consensus 70 g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~s 147 (845)
+..|++++.|++|++||+++++.+..+.+|...|.+++|+| ++++|++|+.||.|++||+++++++..+..|...|.+
T Consensus 166 ~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~ 245 (354)
T 2pbi_B 166 DMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNS 245 (354)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEE
Confidence 99999999999999999999999999999999999999988 4689999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeE
Q psy467 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
++|+|++++|++++.|+.|++ ||++.+.. +..+..+..
T Consensus 246 v~~~p~~~~l~s~s~D~~v~l-------------wd~~~~~~--------------------~~~~~~~~~--------- 283 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDDATCRL-------------YDLRADRE--------------------VAIYSKESI--------- 283 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEE-------------EETTTTEE--------------------EEEECCTTC---------
T ss_pred EEEeCCCCEEEEEeCCCeEEE-------------EECCCCcE--------------------EEEEcCCCc---------
Confidence 999999999999999999999 99987655 333221110
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEE
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IW 307 (845)
...+.+++|+|+++ +|++|+.|+.|++|
T Consensus 284 -----------------------------------------------~~~~~~~~~s~~g~-----~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 284 -----------------------------------------------IFGASSVDFSLSGR-----LLFAGYNDYTINVW 311 (354)
T ss_dssp -----------------------------------------------CSCEEEEEECTTSS-----EEEEEETTSCEEEE
T ss_pred -----------------------------------------------ccceeEEEEeCCCC-----EEEEEECCCcEEEE
Confidence 01234455555555 99999999999999
Q ss_pred ECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 308 DLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 308 Dl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
|+.+++++..+.+|.+.|++++|+|+|++|++|+.|+ |+||+
T Consensus 312 d~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 312 DVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999999999999999 99996
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=303.20 Aligned_cols=282 Identities=17% Similarity=0.246 Sum_probs=233.2
Q ss_pred EEeccCCCcEEEEEEecCCCC-EEEEEeC---CCeEEEEECCCCeeEEEe-cCCCCCeEEEEEcCC---CCEEEEEECCC
Q psy467 9 EDFMAHGASVNCLALGKKSGQ-VLATGGD---DKKVNLWALGKSNCIMSL-SGHSTPVESVQFGNG---EETLSAGCQSG 80 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~-~LaTgs~---DG~I~IWdl~t~~~i~~l-~~h~~~V~sLafSpd---g~~LaSgs~DG 80 (845)
+.+.+|.+.|.+++|+| ++. ++++|+. ||.|++|++.+++..... .+|...|.+++|+|+ +.+|++|+.||
T Consensus 12 ~~~~~h~~~v~~~~~~p-~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVP-CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEECSSCEEEEEECT-TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhccCCCCceEEEEEcC-CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 45688999999999999 664 5556665 899999999988765443 368999999999998 69999999999
Q ss_pred cEEEEECCCCc-EEEEEcCCCCCeEEEEE------ccCCCEEEEEECCCeEEEEECCCCc-eEEEEcCCCC----CeEEE
Q psy467 81 SIKIWNLAVPT-VQRTLNGHKSSITSVDF------HPYGDYLCSGSLDSFIKLWDLRRKG-CIYTYRGHSK----SINSI 148 (845)
Q Consensus 81 tV~VWDl~tg~-~v~~l~~h~~~V~~laf------spdg~~Lasgs~DG~I~IWDl~t~~-~l~~~~~h~~----~V~sL 148 (845)
.|++||+.+++ .+..+.+|...|.+++| +|++++|++++.||.|++||++++. .+..+..+.+ .+.++
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 99999999988 88899999999999955 6789999999999999999999887 6777766554 78999
Q ss_pred E----EecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 149 R----FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 149 a----fSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
+ |+|+++++++++.||.|++ ||+++++. ... ..+...
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i-------------~d~~~~~~--------------------~~~-~~~~~~----- 211 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKL-------------FDLRNMAL--------------------RWE-TNIKNG----- 211 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEE-------------EETTTTEE--------------------EEE-EECSSC-----
T ss_pred EEEeccCCCCCEEEEEccCCeEEE-------------EECccCce--------------------eee-cCCCCc-----
Confidence 8 6789999999999999999 99987665 222 223333
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcC---CCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQP---HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fsp---dg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
+ .++.|+| ++. ++++++.|
T Consensus 212 --v---------------------------~~~~~~~~~~~~~-----------------------------~l~~~~~d 233 (357)
T 3i2n_A 212 --V---------------------------CSLEFDRKDISMN-----------------------------KLVATSLE 233 (357)
T ss_dssp --E---------------------------EEEEESCSSSSCC-----------------------------EEEEEEST
T ss_pred --e---------------------------EEEEcCCCCCCCC-----------------------------EEEEECCC
Confidence 3 5555555 444 89999999
Q ss_pred CeEEEEECCCCeEEEEe-----cCCCCCEEEEEEeCCCC-EEEEEeCCC-EEEEEecCC-------------------ce
Q psy467 302 RTVNFWDLEKFSLVSTT-----EKNSSTIRRLTFSEGGE-CLLGGDTEG-LKVYGWEPA-------------------RQ 355 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl-----~gh~~~VtslafSpdG~-~Lasgs~DG-I~IWDl~tg-------------------k~ 355 (845)
|.|++||+++++++..+ .+|...|++++|+|+++ +|++++.|+ |++||+.++ +.
T Consensus 234 g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~ 313 (357)
T 3i2n_A 234 GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSL 313 (357)
T ss_dssp TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEE
T ss_pred CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccce
Confidence 99999999876554433 48999999999999999 899999999 999999864 35
Q ss_pred EEEecCCCCCeEEEEEc-CCceEEE-E-----EEEEeeCC
Q psy467 356 YDAQPMGWGKVQDLAVT-GTQLWFR-R-----VGTWSHQD 388 (845)
Q Consensus 356 l~tl~~h~~~VtsVafS-dg~lLaa-S-----VsiW~~d~ 388 (845)
+..+.+|...|++++|+ ++++|++ + |.+|.+..
T Consensus 314 ~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 314 LQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred eeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 67888999999999999 8888873 4 99997653
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=305.76 Aligned_cols=251 Identities=21% Similarity=0.413 Sum_probs=210.9
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
.|.+++|+| +|++||+|+.|+.|+|||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.+++....+
T Consensus 125 ~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 125 YIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp BEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 499999999 9999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred cCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEE-------cCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 97 NGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTY-------RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 97 ~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~-------~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
. +...+.+++|+| ++++|++|+.||.|++||++++..+..+ .+|...|.+++|+|++++|++++.|+.|++
T Consensus 204 ~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 204 S-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp E-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred E-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 7 566799999999 8999999999999999999999888776 568899999999999999999999999999
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||+.+........ ....+.....+.+|..
T Consensus 283 -------------wd~~~~~~~~~~~--------~~~~~~~~~~~~~h~~------------------------------ 311 (393)
T 1erj_A 283 -------------WNLQNANNKSDSK--------TPNSGTCEVTYIGHKD------------------------------ 311 (393)
T ss_dssp -------------EEC-----------------------CEEEEEECCSS------------------------------
T ss_pred -------------EECCCCCCccccc--------CCCCCcceEEEecccC------------------------------
Confidence 9998655411000 0001111222233332
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtsl 328 (845)
.|.+++|+|++. +|++|+.|+.|++||+.+++++..+.+|...|.++
T Consensus 312 ----------------------------~v~~~~~~~~~~-----~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 312 ----------------------------FVLSVATTQNDE-----YILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 358 (393)
T ss_dssp ----------------------------CEEEEEECGGGC-----EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred ----------------------------cEEEEEECCCCC-----EEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEE
Confidence 345556666655 99999999999999999999999999999999999
Q ss_pred EEeC------CCCEEEEEeCCC-EEEEEecCC
Q psy467 329 TFSE------GGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 329 afSp------dG~~Lasgs~DG-I~IWDl~tg 353 (845)
+|++ ++.+|++|+.|+ |+||++...
T Consensus 359 ~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 359 AVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 9986 688999999999 999998653
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-32 Score=292.29 Aligned_cols=255 Identities=21% Similarity=0.404 Sum_probs=226.1
Q ss_pred cceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
.+++|.+ +.+.+|...|.+++|+| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++
T Consensus 46 ~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 124 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 124 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred eEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 3677763 67889999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc-CCCCCeEEEEEecCC
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-GHSKSINSIRFSPDG 154 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-~h~~~V~sLafSPdg 154 (845)
|+.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.||.|++||+++++.+..+. .+...+.+++|+|++
T Consensus 125 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (312)
T 4ery_A 125 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 204 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTS
T ss_pred EeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999998887764 456789999999999
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
++|++++.|+.|++ ||+.+++. +..+.+|... ...
T Consensus 205 ~~l~~~~~d~~i~i-------------wd~~~~~~--------------------~~~~~~~~~~-------~~~----- 239 (312)
T 4ery_A 205 KYILAATLDNTLKL-------------WDYSKGKC--------------------LKTYTGHKNE-------KYC----- 239 (312)
T ss_dssp SEEEEEETTTEEEE-------------EETTTTEE--------------------EEEECSSCCS-------SSC-----
T ss_pred CEEEEEcCCCeEEE-------------EECCCCcE--------------------EEEEEecCCc-------eEE-----
Confidence 99999999999999 99998877 5666555433 100
Q ss_pred cccccccchhhhhhccCCCceeEEE-cCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIF-QPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS 313 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~f-spdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~ 313 (845)
....+ .+++. +|++|+.||.|++||+.+++
T Consensus 240 --------------------~~~~~~~~~~~-----------------------------~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 240 --------------------IFANFSVTGGK-----------------------------WIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp --------------------CCEEEECSSSC-----------------------------EEEECCTTSCEEEEETTTCC
T ss_pred --------------------EEEEEEeCCCc-----------------------------EEEEECCCCEEEEEECCCch
Confidence 11122 23344 89999999999999999999
Q ss_pred EEEEecCCCCCEEEEEEeCCCCEEEEEe--CCC-EEEEEec
Q psy467 314 LVSTTEKNSSTIRRLTFSEGGECLLGGD--TEG-LKVYGWE 351 (845)
Q Consensus 314 ~l~tl~gh~~~VtslafSpdG~~Lasgs--~DG-I~IWDl~ 351 (845)
.+..+.+|...|.+++|+|++.+|++++ .|+ |++|+.+
T Consensus 271 ~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 271 IVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred hhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 9999999999999999999999999997 578 9999864
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=317.61 Aligned_cols=290 Identities=17% Similarity=0.234 Sum_probs=243.1
Q ss_pred cceeeeeEE--------eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC----CeeEEEecCCCCCeEEEEEcCC
Q psy467 2 RAKVEKAED--------FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK----SNCIMSLSGHSTPVESVQFGNG 69 (845)
Q Consensus 2 ~irlw~l~~--------L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t----~~~i~~l~~h~~~V~sLafSpd 69 (845)
.+++|++.. ...|...|++++|+| ++++|++|+.||.|++|++.+ .+.+..+.+|...|.+++|+|+
T Consensus 46 ~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 124 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASLQVDSKFNDLDWSH-NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK 124 (416)
T ss_dssp CCEEEESSSGGGCSCSCCCCCSSCEEEEEECS-SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS
T ss_pred eEEEEEccCCCCCcEEEEEecCCceEEEEECC-CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC
Confidence 367887542 235889999999999 999999999999999999987 4588889999999999999998
Q ss_pred -CCEEEEEECCCcEEEEECCCCc------EEEE---EcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEE
Q psy467 70 -EETLSAGCQSGSIKIWNLAVPT------VQRT---LNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 70 -g~~LaSgs~DGtV~VWDl~tg~------~v~~---l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~ 138 (845)
+++|++++.||.|++||+.+++ .... +..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+
T Consensus 125 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 204 (416)
T 2pm9_A 125 QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHL 204 (416)
T ss_dssp STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEE
Confidence 8999999999999999999876 3333 3568899999999999 789999999999999999999999888
Q ss_pred cCC------CCCeEEEEEecCC-CEEEEEeCCC---cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 139 RGH------SKSINSIRFSPDG-QWIASGGEDG---VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 139 ~~h------~~~V~sLafSPdg-~~Lasgs~DG---~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
..+ ...|.+++|+|++ .++++++.|+ .|++ ||++++...
T Consensus 205 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~-------------~d~~~~~~~------------------ 253 (416)
T 2pm9_A 205 SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI-------------WDLRNANTP------------------ 253 (416)
T ss_dssp CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE-------------EETTSTTSC------------------
T ss_pred eccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE-------------EeCCCCCCC------------------
Confidence 876 7889999999997 6899999998 9999 999876320
Q ss_pred eEEEEe-cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcC-CCCcCCCCcccccccCceeEEEcCC
Q psy467 209 LRKSFT-KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQP-HRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 209 ~l~~~~-~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fsp-dg~~~~~~~~~~~~~~I~slafSPd 286 (845)
+..+. +|... + ..++|+| ++.
T Consensus 254 -~~~~~~~~~~~-------v---------------------------~~~~~s~~~~~---------------------- 276 (416)
T 2pm9_A 254 -LQTLNQGHQKG-------I---------------------------LSLDWCHQDEH---------------------- 276 (416)
T ss_dssp -SBCCCSCCSSC-------E---------------------------EEEEECSSCSS----------------------
T ss_pred -cEEeecCccCc-------e---------------------------eEEEeCCCCCC----------------------
Confidence 22222 33333 3 4555555 444
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEec----
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQP---- 360 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl~---- 360 (845)
+|++++.||.|++||+.+++++..+.+|...|++++|+|++ .+|++++.|+ |+||++.++.......
T Consensus 277 -------~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 349 (416)
T 2pm9_A 277 -------LLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETET 349 (416)
T ss_dssp -------CEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-----
T ss_pred -------eEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccc
Confidence 89999999999999999999999999999999999999999 8999999999 9999998765332211
Q ss_pred -------------------------------CCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 361 -------------------------------MGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 361 -------------------------------~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
.|...+++++|+ +|++|+++ |.+|.+.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 350 KQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp -----------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 156778899999 99999887 8888764
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=296.09 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=210.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC--CeeEEEecCCCCCeEEEEEcC--CCCEEEEEECCCcEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK--SNCIMSLSGHSTPVESVQFGN--GEETLSAGCQSGSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t--~~~i~~l~~h~~~V~sLafSp--dg~~LaSgs~DGtV~V 84 (845)
..+.+|.+.|++++|+| +|++||+|+.|++|+||++.+ .+.+..+.+|...|.+++|++ ++++|++|+.|++|++
T Consensus 3 ~~~~~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 46789999999999999 999999999999999999964 467889999999999999986 3899999999999999
Q ss_pred EECCCCc--EEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCCeEEEEEecC-----
Q psy467 85 WNLAVPT--VQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSPD----- 153 (845)
Q Consensus 85 WDl~tg~--~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~V~sLafSPd----- 153 (845)
||+.+++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 9999874 56677889999999999997 8899999999999999998753 24567789999999999997
Q ss_pred --------CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 154 --------GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 154 --------g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+++|++|+.|+.|++ ||++++... ......+.+|...
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~l-------------wd~~~~~~~----------------~~~~~~l~~H~~~------ 206 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKI-------------WKYNSDAQT----------------YVLESTLEGHSDW------ 206 (297)
T ss_dssp --------CCEEEEEETTSCEEE-------------EEEETTTTE----------------EEEEEEECCCSSC------
T ss_pred ccCCCCCCcceEEEEcCCCcEEE-------------EEEcCCCce----------------EEEEEEecCCCCc------
Confidence 579999999999999 998765520 0013445555555
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
| .+++|+|++. .+. +|++++.|+.|+
T Consensus 207 -V---------------------------~~v~~sp~~~---------------------~~~-----~las~s~D~~v~ 232 (297)
T 2pm7_B 207 -V---------------------------RDVAWSPTVL---------------------LRS-----YMASVSQDRTCI 232 (297)
T ss_dssp -E---------------------------EEEEECCCCS---------------------SSE-----EEEEEETTSCEE
T ss_pred -e---------------------------EEEEECCCCC---------------------Cce-----EEEEEECCCcEE
Confidence 5 5556665531 012 899999999999
Q ss_pred EEECCCCe---EEEEe--cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 306 FWDLEKFS---LVSTT--EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 306 IWDl~s~~---~l~tl--~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
+||+++.. ....+ ..|...|.+++|+|+|++||+++.|+ |+||+...
T Consensus 233 iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 99997642 22334 46788999999999999999999999 99999874
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=300.31 Aligned_cols=252 Identities=23% Similarity=0.415 Sum_probs=209.3
Q ss_pred cceeeee-------------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC
Q psy467 2 RAKVEKA-------------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN 68 (845)
Q Consensus 2 ~irlw~l-------------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp 68 (845)
++++|++ +.+.+|...|.+++|+| ++.++++|+.|++|++||+.+++.+..+.+|...|.+++|+|
T Consensus 50 ~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp 128 (343)
T 2xzm_R 50 TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP 128 (343)
T ss_dssp CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS
T ss_pred EEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC
Confidence 4678875 46889999999999999 999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEc---CCCCCeEEEEEccCC----------CEEEEEECCCeEEEEECCCCceE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLN---GHKSSITSVDFHPYG----------DYLCSGSLDSFIKLWDLRRKGCI 135 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~---~h~~~V~~lafspdg----------~~Lasgs~DG~I~IWDl~t~~~l 135 (845)
++++|++++.|++|++||+.. ....... .|...|.+++|+|++ .+|++++.||.|++||. +....
T Consensus 129 ~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~ 206 (343)
T 2xzm_R 129 DNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIR 206 (343)
T ss_dssp STTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEE
T ss_pred CCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCcee
Confidence 999999999999999999984 3343333 688899999999987 79999999999999994 56778
Q ss_pred EEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec
Q psy467 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 136 ~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~ 215 (845)
..+.+|...|.+++|+|+|++|++|+.||.|++ ||+...... ...+.
T Consensus 207 ~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~i-------------wd~~~~~~~-------------------~~~~~- 253 (343)
T 2xzm_R 207 YTFKAHESNVNHLSISPNGKYIATGGKDKKLLI-------------WDILNLTYP-------------------QREFD- 253 (343)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTCEEEE-------------EESSCCSSC-------------------SEEEE-
T ss_pred EEEcCccccceEEEECCCCCEEEEEcCCCeEEE-------------EECCCCccc-------------------ceeec-
Confidence 888999999999999999999999999999999 998543320 11111
Q ss_pred CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 216 GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 216 h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
+.. .|.+++|+|++. ++
T Consensus 254 ~~~----------------------------------------------------------~v~~v~~sp~~~-----~l 270 (343)
T 2xzm_R 254 AGS----------------------------------------------------------TINQIAFNPKLQ-----WV 270 (343)
T ss_dssp CSS----------------------------------------------------------CEEEEEECSSSC-----EE
T ss_pred CCC----------------------------------------------------------cEEEEEECCCCC-----EE
Confidence 111 234444555444 66
Q ss_pred EEEeCCCeEEEEECCCCeEEE--Eec-----------CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 296 TSSSADRTVNFWDLEKFSLVS--TTE-----------KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~~l~--tl~-----------gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+++ .|+.|++||+.+++... .+. +|...|++++|+|+|++|++|+.|| |++|+++++
T Consensus 271 a~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 271 AVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred EEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 655 58889999998765432 443 6788899999999999999999999 999998765
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=293.28 Aligned_cols=260 Identities=15% Similarity=0.234 Sum_probs=216.0
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCCeEEEEEcC--CCCEEEEEECCCcE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTPVESVQFGN--GEETLSAGCQSGSI 82 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~V~sLafSp--dg~~LaSgs~DGtV 82 (845)
+.+.+|.+.|++++|+| ++++||+|+.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|
T Consensus 5 ~~~~gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccCcccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 45789999999999999 9999999999999999999876 46777889999999999999 69999999999999
Q ss_pred EEEECCCC---------cEEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCceEEEEc------------
Q psy467 83 KIWNLAVP---------TVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTYR------------ 139 (845)
Q Consensus 83 ~VWDl~tg---------~~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~~l~~~~------------ 139 (845)
++||+.++ +.+..+..|...|.+++|+|+ +++|++++.||.|++||+++++.+..+.
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 99999987 567888899999999999999 9999999999999999998876543332
Q ss_pred -CCCCCeEEEEEecC---CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec
Q psy467 140 -GHSKSINSIRFSPD---GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 140 -~h~~~V~sLafSPd---g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~ 215 (845)
.+...+.+++|+|+ +.++++++.|+.+.+ |+...+.. ..+..+.+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~-------------~~~~~~~~------------------~~~~~~~~ 212 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIY-------------QRGKDGKL------------------HVAAKLPG 212 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEE-------------EECTTSCE------------------EEEEECCC
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEE-------------EccCCCce------------------eeeeecCC
Confidence 57788999999997 899999999999977 77665443 01233333
Q ss_pred CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 216 GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 216 h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
|... | .+++|+|++.. .++ +|
T Consensus 213 h~~~-------i---------------------------~~~~~~p~~~~--------------------~~~-----~l 233 (351)
T 3f3f_A 213 HKSL-------I---------------------------RSISWAPSIGR--------------------WYQ-----LI 233 (351)
T ss_dssp CCSC-------E---------------------------EEEEECCCSSC--------------------SSE-----EE
T ss_pred CCcc-------e---------------------------eEEEECCCCCC--------------------cce-----EE
Confidence 4333 3 44555555410 003 89
Q ss_pred EEEeCCCeEEEEECCCC----------------------------------------------eEEEEecCCCCCEEEEE
Q psy467 296 TSSSADRTVNFWDLEKF----------------------------------------------SLVSTTEKNSSTIRRLT 329 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~----------------------------------------------~~l~tl~gh~~~Vtsla 329 (845)
++|+.||.|++||++.+ +++..+.+|...|++++
T Consensus 234 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 313 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVS 313 (351)
T ss_dssp EEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEE
Confidence 99999999999998764 67788889999999999
Q ss_pred EeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 330 FSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 330 fSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
|+|+|++|++++.|| |+||++.+++.+..+
T Consensus 314 ~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 314 WNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 999999999999999 999999988655443
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-32 Score=297.17 Aligned_cols=262 Identities=19% Similarity=0.299 Sum_probs=204.0
Q ss_pred cceeeeeE--------Ee-cc-CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC-------CCeeEEEecCCCCCeEEE
Q psy467 2 RAKVEKAE--------DF-MA-HGASVNCLALGKKSGQVLATGGDDKKVNLWALG-------KSNCIMSLSGHSTPVESV 64 (845)
Q Consensus 2 ~irlw~l~--------~L-~g-H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~-------t~~~i~~l~~h~~~V~sL 64 (845)
++++|++. .+ .+ |.+.|.+++|+| ++++||+|+.|++|+||++. ..+.+..+.+|...|.++
T Consensus 35 ~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v 113 (330)
T 2hes_X 35 KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGV 113 (330)
T ss_dssp CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEE
T ss_pred EEEEEEecCCCeEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEE
Confidence 46777642 34 34 999999999999 89999999999999999984 345677889999999999
Q ss_pred EEcCCCCEEEEEECCCcEEEEECCC----CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC--ceEEEE
Q psy467 65 QFGNGEETLSAGCQSGSIKIWNLAV----PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK--GCIYTY 138 (845)
Q Consensus 65 afSpdg~~LaSgs~DGtV~VWDl~t----g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~--~~l~~~ 138 (845)
+|+|++++|++|+.|++|++||+.. .+++..+.+|...|.+++|+|++++|++++.|++|++||..++ +++..+
T Consensus 114 ~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 114 AWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp EECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEc
Confidence 9999999999999999999999943 2567788999999999999999999999999999999999766 678889
Q ss_pred cCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecC
Q psy467 139 RGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 139 ~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h 216 (845)
.+|...|.+++|+|+ +.+|++++.|+.|++ ||+..+.... . ..
T Consensus 194 ~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~i-------------w~~~~~~~~~----------------~--~~---- 238 (330)
T 2hes_X 194 NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRV-------------WKYMGDDEDD----------------Q--QE---- 238 (330)
T ss_dssp CCCSSCEEEEEECCSSSSCEEEEEETTSCEEE-------------EEEEEECTTS----------------C--EE----
T ss_pred cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEE-------------EEecCCCccc----------------c--ce----
Confidence 999999999999998 778999999999999 9976443200 0 00
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
. ......+. .+...|.+++|++++ +|+
T Consensus 239 ----------~---------------------------~~~~~~~~----------~h~~~v~~v~~s~~~------~l~ 265 (330)
T 2hes_X 239 ----------W---------------------------VCEAILPD----------VHKRQVYNVAWGFNG------LIA 265 (330)
T ss_dssp ----------E---------------------------EEEEECCS----------CCSSCEEEEEECTTS------CEE
T ss_pred ----------e---------------------------EEeeeccc----------ccccceEEEEEcCCC------EEE
Confidence 0 00000010 012346666676544 689
Q ss_pred EEeCCCeEEEEECCCCe--EEEE-ecCCCC-CEEEEEEeC--CCCEEEEEeCCC-EEEEEecC
Q psy467 297 SSSADRTVNFWDLEKFS--LVST-TEKNSS-TIRRLTFSE--GGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 297 tgs~DG~I~IWDl~s~~--~l~t-l~gh~~-~VtslafSp--dG~~Lasgs~DG-I~IWDl~t 352 (845)
+++.||.|++||..+++ .+.. +.+|.. .|++++|+| ++++||+|+.|+ |+||+++.
T Consensus 266 s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 266 SVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 99999999999998774 3333 357876 899999999 799999999999 99999865
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-33 Score=309.51 Aligned_cols=263 Identities=25% Similarity=0.403 Sum_probs=225.7
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-------eEEEecCCCCCeEEEEEcC
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-------CIMSLSGHSTPVESVQFGN 68 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-------~i~~l~~h~~~V~sLafSp 68 (845)
++++|+ .+.+.+|...|.+++|+| ++++||+|+.|+.|++|++.+.. ....+.+|...|.++.|+|
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~-~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~ 167 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAP-NGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVP 167 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECT-TSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCS
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECC-CCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEec
Confidence 478887 467899999999999999 99999999999999999986432 3456789999999999999
Q ss_pred C-CCEEEEEECCCcEEEEECCCCcEEEEE-----cCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECC-CCceEEEEcC
Q psy467 69 G-EETLSAGCQSGSIKIWNLAVPTVQRTL-----NGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLR-RKGCIYTYRG 140 (845)
Q Consensus 69 d-g~~LaSgs~DGtV~VWDl~tg~~v~~l-----~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~-t~~~l~~~~~ 140 (845)
+ +..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++++|++|+.||.|++||++ .+..+..+.+
T Consensus 168 ~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~ 247 (380)
T 3iz6_a 168 DQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG 247 (380)
T ss_dssp SSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC
T ss_pred CCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC
Confidence 6 457999999999999999999998887 57899999999987 78999999999999999997 4578889999
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 141 h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
|...|.+++|+|++++|++++.||.|++ ||+++++. +..+..+...
T Consensus 248 h~~~v~~v~~~p~~~~l~s~s~D~~i~l-------------wd~~~~~~--------------------~~~~~~~~~~- 293 (380)
T 3iz6_a 248 HEGDINSVKFFPDGQRFGTGSDDGTCRL-------------FDMRTGHQ--------------------LQVYNREPDR- 293 (380)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSCEEE-------------EETTTTEE--------------------EEEECCCCSS-
T ss_pred cCCCeEEEEEecCCCeEEEEcCCCeEEE-------------EECCCCcE--------------------EEEecccccc-
Confidence 9999999999999999999999999999 99998877 4444332211
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
. ......+++++|+|+|+ +|++|+.
T Consensus 294 ------~--------------------------------------------~~~~~~v~~~~~s~~g~-----~l~~g~~ 318 (380)
T 3iz6_a 294 ------N--------------------------------------------DNELPIVTSVAFSISGR-----LLFAGYS 318 (380)
T ss_dssp ------S--------------------------------------------CCSSCSCSEEEECSSSS-----EEEEECT
T ss_pred ------c--------------------------------------------ccccCceEEEEECCCCC-----EEEEEEC
Confidence 0 00112356667777776 9999999
Q ss_pred CCeEEEEECCCCeEEEEe----cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc
Q psy467 301 DRTVNFWDLEKFSLVSTT----EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 301 DG~I~IWDl~s~~~l~tl----~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk 354 (845)
||.|++||+.+++.+..+ .+|.+.|++++|+|+|++|++|+.|+ |+||++...+
T Consensus 319 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 319 NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999999999988877 67999999999999999999999999 9999987654
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-31 Score=300.37 Aligned_cols=282 Identities=21% Similarity=0.348 Sum_probs=246.0
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEc--CCCCEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG--NGEETL 73 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafS--pdg~~L 73 (845)
++++|+ +..+.+|.+.|++++|++ ++ +|++|+.||+|++||+.+++.+..+.+|...|.+++|+ +++.+|
T Consensus 143 ~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l 220 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSGHDGGVWALKYAH-GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI 220 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECS-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEE
T ss_pred cEEEEECCCCcEEEEEeCCCcCEEEEEEcC-CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEE
Confidence 467787 467899999999999998 55 99999999999999999999999999999999999998 578899
Q ss_pred EEEECCCcEEEEECCCCc-----------------------EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC
Q psy467 74 SAGCQSGSIKIWNLAVPT-----------------------VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~-----------------------~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~ 130 (845)
++|+.||.|++||+.++. .+..+.+|...|.++ +++++++++++.||.|++||++
T Consensus 221 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~ 298 (464)
T 3v7d_B 221 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVA 298 (464)
T ss_dssp EEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETT
T ss_pred EEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999998765 255677888888877 5778999999999999999999
Q ss_pred CCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeE
Q psy467 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR 210 (845)
Q Consensus 131 t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l 210 (845)
+++++..+.+|...|.+++|+|+++++++++.||.|++ ||+.+++. +
T Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~v-------------wd~~~~~~--------------------~ 345 (464)
T 3v7d_B 299 QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRI-------------WDLENGEL--------------------M 345 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEE-------------EETTTTEE--------------------E
T ss_pred CCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEE-------------EECCCCcE--------------------E
Confidence 99999999999999999999999999999999999999 99998887 7
Q ss_pred EEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcc
Q psy467 211 KSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPML 290 (845)
Q Consensus 211 ~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~ 290 (845)
..+.+|... + ..+.++ +.
T Consensus 346 ~~~~~h~~~-------v---------------------------~~~~~~--~~-------------------------- 363 (464)
T 3v7d_B 346 YTLQGHTAL-------V---------------------------GLLRLS--DK-------------------------- 363 (464)
T ss_dssp EEECCCSSC-------E---------------------------EEEEEC--SS--------------------------
T ss_pred EEEeCCCCc-------E---------------------------EEEEEc--CC--------------------------
Confidence 777777666 5 555555 34
Q ss_pred cceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEE-ecCCCCCeEE
Q psy467 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDA-QPMGWGKVQD 368 (845)
Q Consensus 291 ~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~t-l~~h~~~Vts 368 (845)
++++|+.||.|++||+.++....... |...+..++|++++++|++|+ |+ |++||+.+++.+.. +..|.+.|++
T Consensus 364 ---~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~ 438 (464)
T 3v7d_B 364 ---FLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWS 438 (464)
T ss_dssp ---EEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEE
T ss_pred ---EEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEE
Confidence 89999999999999999988766664 567788999999999999999 67 99999999999876 6778899999
Q ss_pred EEEcCCceEEEE-----EEEEeeC
Q psy467 369 LAVTGTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 369 VafSdg~lLaaS-----VsiW~~d 387 (845)
++|+++.+++++ +.+|..|
T Consensus 439 v~~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 439 VNFKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp EEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEecCCEEEEEEEeCCeEEEEEee
Confidence 999966666665 4555544
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=302.92 Aligned_cols=247 Identities=19% Similarity=0.240 Sum_probs=205.3
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE----EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI----MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i----~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
...+|.+.|++++|+| ++. +++++.||+|+|||+.+++.. ....+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 89 ~~~~~~~~V~~~~~s~-d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVS-EKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp EEEECSSCEEEEEEET-TTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred ccCCCCCCEEEEEEcC-CCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 3457999999999999 665 556788999999999887654 2345799999999999999999999999999999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEEEEEecC-CCEEEEEe
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINSIRFSPD-GQWIASGG 161 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~sLafSPd-g~~Lasgs 161 (845)
|+.+++.+..+.+|...|.+++|++++. ++++++.||.|++||+++++++..+. .+...+.+++|+|+ +.+|++|+
T Consensus 167 d~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 167 DLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee
Confidence 9999999999999999999999999874 78999999999999999888766543 46778999999997 56899999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
.|+.|++ ||+++++. +..+.+|... |
T Consensus 247 ~d~~i~~-------------wd~~~~~~--------------------~~~~~~~~~~-------v-------------- 272 (357)
T 4g56_B 247 ETGNVSL-------------VNIKNPDS--------------------AQTSAVHSQN-------I-------------- 272 (357)
T ss_dssp SSSCEEE-------------EESSCGGG--------------------CEEECCCSSC-------E--------------
T ss_pred cccceeE-------------EECCCCcE--------------------eEEEecccee-------E--------------
Confidence 9999999 99998877 5666666655 5
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN 321 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh 321 (845)
.+++|+|++. + +|++|+.|+.|+|||+++++++..+ +|
T Consensus 273 -------------~~l~~sp~~~-----------------------~-----~lasgs~D~~i~iwd~~~~~~~~~~-~H 310 (357)
T 4g56_B 273 -------------TGLAYSYHSS-----------------------P-----FLASISEDCTVAVLDADFSEVFRDL-SH 310 (357)
T ss_dssp -------------EEEEECSSSS-----------------------C-----CEEEEETTSCEEEECTTSCEEEEEC-CC
T ss_pred -------------EEEEEcCCCC-----------------------C-----EEEEEeCCCEEEEEECCCCcEeEEC-CC
Confidence 5666666543 1 7999999999999999999887665 79
Q ss_pred CCCEEEEEEeC-CCCEEEEEeCCC-EEEEEecCCc
Q psy467 322 SSTIRRLTFSE-GGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 322 ~~~VtslafSp-dG~~Lasgs~DG-I~IWDl~tgk 354 (845)
.+.|++++|+| ++++|++++.|+ |++|++.+..
T Consensus 311 ~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 311 RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 99999999998 899999999999 9999997643
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=306.59 Aligned_cols=284 Identities=13% Similarity=0.185 Sum_probs=234.0
Q ss_pred eEEe-ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC---Ce---eEEEecCCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 8 AEDF-MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK---SN---CIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 8 l~~L-~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t---~~---~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
+.++ .+|.+.|++++|+|.++++||+|+.||+|+|||+.+ +. ....+ +|...|.+++|+|++++|++|+.||
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 5677 899999999999986789999999999999999865 33 23333 4999999999999999999999999
Q ss_pred cEEEEECC---CCcEEEEEcC------------CCCCeEEEE--EccCCCEEEEEECCCeEEEEECCCCceEEEEcC--C
Q psy467 81 SIKIWNLA---VPTVQRTLNG------------HKSSITSVD--FHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG--H 141 (845)
Q Consensus 81 tV~VWDl~---tg~~v~~l~~------------h~~~V~~la--fspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~--h 141 (845)
.|++||+. +++....+.. +...+.++. +++++.+|++++.||.|++||+++++++..+.. |
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h 213 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR 213 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC
Confidence 99999995 5554443321 455667776 557899999999999999999999999999988 8
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe-cCCCCC
Q psy467 142 SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT-KGRPGG 220 (845)
Q Consensus 142 ~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~-~h~~~~ 220 (845)
...|.+++|+|++++|++|+.||.|++ ||+++++. +..+. .|...
T Consensus 214 ~~~v~~~~~s~~~~~l~s~~~dg~i~i-------------wd~~~~~~--------------------~~~~~~~~~~~- 259 (437)
T 3gre_A 214 HGAVSSICIDEECCVLILGTTRGIIDI-------------WDIRFNVL--------------------IRSWSFGDHAP- 259 (437)
T ss_dssp GCCEEEEEECTTSCEEEEEETTSCEEE-------------EETTTTEE--------------------EEEEBCTTCEE-
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEE-------------EEcCCccE--------------------EEEEecCCCCc-
Confidence 899999999999999999999999999 99998776 55543 33323
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
| .+++|+|. |++++. +|++|+.
T Consensus 260 ------v---------------------------~~~~~~~~--------------------~s~~~~-----~l~s~~~ 281 (437)
T 3gre_A 260 ------I---------------------------THVEVCQF--------------------YGKNSV-----IVVGGSS 281 (437)
T ss_dssp ------E---------------------------EEEEECTT--------------------TCTTEE-----EEEEEST
T ss_pred ------e---------------------------EEEEeccc--------------------cCCCcc-----EEEEEcC
Confidence 4 55655543 234555 8999999
Q ss_pred CCeEEEEECCCCeEEEEecCC--------------------------CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 301 DRTVNFWDLEKFSLVSTTEKN--------------------------SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 301 DG~I~IWDl~s~~~l~tl~gh--------------------------~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
||.|++||+.+++++..+.+| ...|++++|+ ++++|++|+.|+ |++||+.++
T Consensus 282 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 999999999999998888754 4458889999 789999999999 999999998
Q ss_pred ceEEEecC-------------------------------------CCCCeEEEEEc-C--CceEEEE-----EEEEe
Q psy467 354 RQYDAQPM-------------------------------------GWGKVQDLAVT-G--TQLWFRR-----VGTWS 385 (845)
Q Consensus 354 k~l~tl~~-------------------------------------h~~~VtsVafS-d--g~lLaaS-----VsiW~ 385 (845)
+++..+.+ |.+.|++++|+ + +.+|+++ |.+|.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 361 SSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp GGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 87777665 78899999999 5 5667666 88884
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-32 Score=334.46 Aligned_cols=366 Identities=11% Similarity=0.071 Sum_probs=258.7
Q ss_pred cceeeeeE-----EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 2 RAKVEKAE-----DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 2 ~irlw~l~-----~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
++++|... ....|...|.+++|+| +++|++++.|++|+|||+.+++.+..+. |...|++++|+|++++|++|
T Consensus 40 ~I~lw~~~~~~~~~~~~~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sg 116 (902)
T 2oaj_A 40 EVHIYGQQQVEVVIKLEDRSAIKEMRFVK--GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIG 116 (902)
T ss_dssp EEEEECSTTCEEEEECSSCCCEEEEEEET--TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEE
T ss_pred EEEEEeCCCcEEEEEcCCCCCEEEEEEcC--CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEE
Confidence 46777632 2335888999999999 6699999999999999999999998887 77899999999999999999
Q ss_pred ECCCcEEEEECCCCcEE-----------EEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEEcCC---
Q psy467 77 CQSGSIKIWNLAVPTVQ-----------RTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGH--- 141 (845)
Q Consensus 77 s~DGtV~VWDl~tg~~v-----------~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h--- 141 (845)
+.||.|++||+.+++.. ..+.+|.+.|.+++|+|+ +..|++|+.||.| +||+++++++..+..|
T Consensus 117 s~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~ 195 (902)
T 2oaj_A 117 LQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPP 195 (902)
T ss_dssp ETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCT
T ss_pred cCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCC
Confidence 99999999999988754 223568899999999996 4789999999999 9999999998888755
Q ss_pred ---------------CCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC--C-----------
Q psy467 142 ---------------SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT--P----------- 193 (845)
Q Consensus 142 ---------------~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~--~----------- 193 (845)
...|.+++|+|+|++|++++.||.|++ ||+++++.+.. +
T Consensus 196 g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l-------------Wd~~~g~~~~~r~l~~~~~~~~~~~ 262 (902)
T 2oaj_A 196 FAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF-------------WDANSGHMIMARTVFETEINVPQPD 262 (902)
T ss_dssp TCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE-------------EETTTCCEEEEECSSCSCTTSCCTT
T ss_pred cCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE-------------EECCCCcEEEEEeecccccCCCCCc
Confidence 467999999999999999999999999 99988775421 1
Q ss_pred -------CCCCCcceeecC----CCCeEEEEecCCCCCccceeeEeeeccc-----------------------------
Q psy467 194 -------PPQYTSSVPFSH----NTSLRKSFTKGRPGGTKAKIDVTRIEEN----------------------------- 233 (845)
Q Consensus 194 -------~~~~i~svs~sp----dg~~l~~~~~h~~~~~~~~i~V~~i~~~----------------------------- 233 (845)
....+..++|++ ++..+....+.........+.++.+...
T Consensus 263 ~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 342 (902)
T 2oaj_A 263 YIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTN 342 (902)
T ss_dssp CCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSS
T ss_pred CCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCC
Confidence 122477888854 3322222222211100011112221100
Q ss_pred ccccc------------------------cccchhhhhhc-----------------cCCCceeEEEcCCCC--c-----
Q psy467 234 AESED------------------------QAGEEELFATI-----------------ANPCDYSAIFQPHRS--L----- 265 (845)
Q Consensus 234 ~~~~~------------------------~~~~~~l~~~~-----------------~~~~~~~l~fspdg~--~----- 265 (845)
....+ .++...+|... ..+.+.++++++... |
T Consensus 343 ~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~ 422 (902)
T 2oaj_A 343 VPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALS 422 (902)
T ss_dssp SCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHH
T ss_pred CceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHh
Confidence 00000 00000000000 000111112211000 0
Q ss_pred ---CCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE----EE--ec-----CCCCCEEEEEEe
Q psy467 266 ---NRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV----ST--TE-----KNSSTIRRLTFS 331 (845)
Q Consensus 266 ---~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l----~t--l~-----gh~~~VtslafS 331 (845)
........+...+..++|+|+++ +|++|+.|++|++||+.++... .. +. +|...|++++|+
T Consensus 423 ~~~~~~~~l~G~~~~v~sv~~spdg~-----~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafs 497 (902)
T 2oaj_A 423 AAQNKDYLLKGGVRTKRQKLPAEYGT-----AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFA 497 (902)
T ss_dssp TTBCCCCSCCCSBCCCCCCCCCSEEE-----EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEE
T ss_pred cccCCCCcccCCcCCCCcccccccCc-----EEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEec
Confidence 00000111233455678889998 9999999999999999876421 11 22 788999999999
Q ss_pred CCCCEEEEEeCCC-EEEEEecCCc---------------------------------------------eEEEecCCCCC
Q psy467 332 EGGECLLGGDTEG-LKVYGWEPAR---------------------------------------------QYDAQPMGWGK 365 (845)
Q Consensus 332 pdG~~Lasgs~DG-I~IWDl~tgk---------------------------------------------~l~tl~~h~~~ 365 (845)
|||++||+|+.|+ |+||++.+++ ++..+.+|.+.
T Consensus 498 pdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~ 577 (902)
T 2oaj_A 498 AETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGK 577 (902)
T ss_dssp TTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCS
T ss_pred CCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCc
Confidence 9999999999999 9999998762 46778899999
Q ss_pred eEEEEEc-CCceEEEE-----EEEEeeCCCC
Q psy467 366 VQDLAVT-GTQLWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 366 VtsVafS-dg~lLaaS-----VsiW~~d~~~ 390 (845)
|++++|| || +||++ |.+|.++...
T Consensus 578 V~svafSpdG-~lAsgs~D~tv~lwd~~~~~ 607 (902)
T 2oaj_A 578 TSAINNSNIG-FVGIAYAAGSLMLIDRRGPA 607 (902)
T ss_dssp EEEEEECBTS-EEEEEETTSEEEEEETTTTE
T ss_pred EEEEEecCCc-EEEEEeCCCcEEEEECCCCe
Confidence 9999999 88 88877 9999876543
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-32 Score=302.14 Aligned_cols=288 Identities=16% Similarity=0.189 Sum_probs=234.2
Q ss_pred ceeeeeEE------eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 3 AKVEKAED------FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 3 irlw~l~~------L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
+++|++.. +.+| ..+....|++ ++++||+|+.||.|++||+.+++....+.+|...|.+++|+|++++|++|
T Consensus 80 v~i~d~~~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 157 (420)
T 3vl1_A 80 DFLFNTIIRDGSKMLKRA-DYTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISS 157 (420)
T ss_dssp EEEEECCSEETTTTSCSC-CEEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEecccceeeEEecC-CceEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEE
Confidence 56777542 3344 4445556777 99999999999999999999999998889999999999999999999999
Q ss_pred ECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC---CCCCeEE------
Q psy467 77 CQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG---HSKSINS------ 147 (845)
Q Consensus 77 s~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~---h~~~V~s------ 147 (845)
+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+.. +...+.+
T Consensus 158 s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 237 (420)
T 3vl1_A 158 SQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVG 237 (420)
T ss_dssp ETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEEC
T ss_pred eCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999988874 3344444
Q ss_pred ---------------EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE
Q psy467 148 ---------------IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS 212 (845)
Q Consensus 148 ---------------LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~ 212 (845)
++|+|++++|++++.||.|++ ||+++++. +..
T Consensus 238 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i-------------~d~~~~~~--------------------~~~ 284 (420)
T 3vl1_A 238 TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITV-------------HNVFSKEQ--------------------TIQ 284 (420)
T ss_dssp CCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEE-------------EETTTCCE--------------------EEE
T ss_pred CcceeeecccCcccceEEcCCCCEEEEEcCCCeEEE-------------EECCCCce--------------------eEE
Confidence 455788999999999999999 99987766 333
Q ss_pred Ee-cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCccc
Q psy467 213 FT-KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLC 291 (845)
Q Consensus 213 ~~-~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~ 291 (845)
+. .|.. .+.+++|+|+++.
T Consensus 285 ~~~~~~~----------------------------------------------------------~v~~~~~~~~~~~-- 304 (420)
T 3vl1_A 285 LPSKFTC----------------------------------------------------------SCNSLTVDGNNAN-- 304 (420)
T ss_dssp ECCTTSS----------------------------------------------------------CEEEEEECSSCTT--
T ss_pred cccccCC----------------------------------------------------------CceeEEEeCCCCC--
Confidence 22 1222 2344444454432
Q ss_pred ceEEEEEeCCCeEEEEECCCCe-EEEEecC-CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC---------ceEEEe
Q psy467 292 FILTTSSSADRTVNFWDLEKFS-LVSTTEK-NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA---------RQYDAQ 359 (845)
Q Consensus 292 ~~lLatgs~DG~I~IWDl~s~~-~l~tl~g-h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg---------k~l~tl 359 (845)
+|++|+.||.|++||+++++ ++..+.+ |...|+++.| +++++|++++.|+ |++|++... .....+
T Consensus 305 --~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 381 (420)
T 3vl1_A 305 --YIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFL 381 (420)
T ss_dssp --EEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEE
T ss_pred --EEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEE
Confidence 79999999999999999874 4667776 6677888855 5788999999999 999999873 223346
Q ss_pred cCCCCCeEEEEEc-CCc----eEEEE----EEEEeeCC
Q psy467 360 PMGWGKVQDLAVT-GTQ----LWFRR----VGTWSHQD 388 (845)
Q Consensus 360 ~~h~~~VtsVafS-dg~----lLaaS----VsiW~~d~ 388 (845)
..|.+.|.+++|+ +++ +++++ +.+|.+..
T Consensus 382 ~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 382 VSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 6788999999999 777 66666 88897653
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=310.53 Aligned_cols=262 Identities=13% Similarity=0.107 Sum_probs=207.6
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC--eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS--NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.+..|.+.|++++|+| ++++||+|+.|+.|+||++.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 6 ~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEECSSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eEecCCCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 4455778999999999 9999999999999999999988 778889999999999999999999999999999999999
Q ss_pred CCCc---EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc---eEEEEcC-CCCCeEEEEEecCCCEEEEE
Q psy467 88 AVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG---CIYTYRG-HSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 88 ~tg~---~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~---~l~~~~~-h~~~V~sLafSPdg~~Lasg 160 (845)
.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.+++|+|++++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 9877 677788899999999999999999999999999999998876 4677777 99999999999999999999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
+.|+.|++ ||+........... .+.+. ... .
T Consensus 165 ~~d~~i~i-------------wd~~~~~~~~~~~~--------~~~~~--------~~~-------~------------- 195 (377)
T 3dwl_C 165 CADRKAYV-------------LSAYVRDVDAKPEA--------SVWGS--------RLP-------F------------- 195 (377)
T ss_dssp ESSSCEEE-------------EEECCSSCC-CCCS--------CSSCS--------CCC-------E-------------
T ss_pred eCCCEEEE-------------EEEEecccCCCccc--------ccccc--------ccc-------h-------------
Confidence 99999999 99876553111000 00000 000 0
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE----EE
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL----VS 316 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~----l~ 316 (845)
......- .+...|++++|+|+++ +|++++.||.|++||+.++++ +.
T Consensus 196 --------------~~~~~~~-----------~~~~~v~~~~~sp~~~-----~l~~~~~d~~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 196 --------------NTVCAEY-----------PSGGWVHAVGFSPSGN-----ALAYAGHDSSVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp --------------EEEEECC-----------CCSSSEEEEEECTTSS-----CEEEEETTTEEC-CEECSTTSCEEECC
T ss_pred --------------hhhhhcc-----------cCCceEEEEEECCCCC-----EEEEEeCCCcEEEEECCCCCCcceeeE
Confidence 0000000 1234577777778777 899999999999999999876 77
Q ss_pred EecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEec
Q psy467 317 TTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351 (845)
Q Consensus 317 tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~ 351 (845)
.+.+|...|.+++|+|+|++|++++.+++.+|+..
T Consensus 246 ~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 246 TVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp CEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred eecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 88899999999999999999999988886677765
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-32 Score=302.71 Aligned_cols=297 Identities=14% Similarity=0.207 Sum_probs=232.0
Q ss_pred eeeeEEecc-------CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-----------eEEEecCCC--------
Q psy467 5 VEKAEDFMA-------HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-----------CIMSLSGHS-------- 58 (845)
Q Consensus 5 lw~l~~L~g-------H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-----------~i~~l~~h~-------- 58 (845)
-|+..+..+ |.+.|++++|+| +|++||+|+.||.|+||++.+++ ....+.+|.
T Consensus 11 ~w~~~q~~~~~~~~~~~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 89 (447)
T 3dw8_B 11 QWCFSQVKGAVDDDVAEADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKS 89 (447)
T ss_dssp CCEEEECCSCSSSCCCGGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGT
T ss_pred eEEEEEecccccccccccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccc
Confidence 466555443 478999999999 99999999999999999998776 578889998
Q ss_pred ----CCeEEEEEcCCC--CEEEEEECCCcEEEEECCCCcEE---------------------------------------
Q psy467 59 ----TPVESVQFGNGE--ETLSAGCQSGSIKIWNLAVPTVQ--------------------------------------- 93 (845)
Q Consensus 59 ----~~V~sLafSpdg--~~LaSgs~DGtV~VWDl~tg~~v--------------------------------------- 93 (845)
..|.+++|+|++ .+|++++.|+.|++||+.++...
T Consensus 90 ~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (447)
T 3dw8_B 90 LEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPR 169 (447)
T ss_dssp EEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEE
T ss_pred ccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccce
Confidence 889999999998 79999999999999999764432
Q ss_pred EE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-CceEEE-------EcCCCCCeEEEEEecCC-CEEEEEeCC
Q psy467 94 RT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KGCIYT-------YRGHSKSINSIRFSPDG-QWIASGGED 163 (845)
Q Consensus 94 ~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~~l~~-------~~~h~~~V~sLafSPdg-~~Lasgs~D 163 (845)
.. ..+|...|.+++|+|++++|++| .|+.|++||+++ +..+.. +..|...|.+++|+|++ ++|++++.|
T Consensus 170 ~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 248 (447)
T 3dw8_B 170 RIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK 248 (447)
T ss_dssp EEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT
T ss_pred EEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC
Confidence 12 36799999999999999999998 799999999984 344442 45789999999999998 999999999
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
|.|++ ||+++++.... .+..+..+... .
T Consensus 249 g~i~i-------------wd~~~~~~~~~----------------~~~~~~~~~~~-------~---------------- 276 (447)
T 3dw8_B 249 GTIRL-------------CDMRASALCDR----------------HSKLFEEPEDP-------S---------------- 276 (447)
T ss_dssp SCEEE-------------EETTTCSSSCT----------------TCEEECCC---------------------------
T ss_pred CeEEE-------------EECcCCccccc----------------eeeEeccCCCc-------c----------------
Confidence 99999 99998775111 02233333221 0
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-CeEEEEecCCC
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-FSLVSTTEKNS 322 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~~~l~tl~gh~ 322 (845)
.......+...|.+++|+|+++ +|++++. +.|++||+++ ++++..+.+|.
T Consensus 277 -----------------------~~~~~~~~~~~v~~~~~s~~g~-----~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 277 -----------------------NRSFFSEIISSISDVKFSHSGR-----YMMTRDY-LSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp ------------------------CCHHHHHTTCEEEEEECTTSS-----EEEEEES-SEEEEEETTCCSSCSCCEESCG
T ss_pred -----------------------ccccccccCceEEEEEECCCCC-----EEEEeeC-CeEEEEeCCCCccccceeeccc
Confidence 0000111234566777777776 8999998 9999999997 88888888875
Q ss_pred CC---------------EEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec--------------------------
Q psy467 323 ST---------------IRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP-------------------------- 360 (845)
Q Consensus 323 ~~---------------VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~-------------------------- 360 (845)
.. +..++|+|+|++|++|+.|+ |+|||+.+++.+. +.
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKD 406 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTT
T ss_pred cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccc
Confidence 32 33499999999999999999 9999999987653 22
Q ss_pred -------CCCCCeEEEEEc-CCceEEEE----EEEEe
Q psy467 361 -------MGWGKVQDLAVT-GTQLWFRR----VGTWS 385 (845)
Q Consensus 361 -------~h~~~VtsVafS-dg~lLaaS----VsiW~ 385 (845)
.+...|.+++|+ ++.+||++ +.+|.
T Consensus 407 ~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~ 443 (447)
T 3dw8_B 407 EISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQ 443 (447)
T ss_dssp CEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEE
T ss_pred cccccccccCCceeEEEECCCCCEEEEEecceeeeec
Confidence 234568999999 88999888 77775
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-31 Score=295.34 Aligned_cols=279 Identities=23% Similarity=0.341 Sum_probs=237.3
Q ss_pred EEeccCCCc--EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC-CCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 9 EDFMAHGAS--VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG-HSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 9 ~~L~gH~~~--V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
....+|... +.+++|++ ..+++++.||.|++|++.+++....+.. |...|.+++|+|++++|++|+.||.|++|
T Consensus 85 ~~~~~~~~~~~~~~~~~s~---~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWSN---LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp EECTTCCCCTTCBCEEECT---TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeCCCCcCCceEEEEeecC---CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEE
Confidence 344577665 44566654 5577888999999999999998887765 88999999999999999999999999999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC-CCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR-RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~-t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
|+.+++.+..+.+|...|.+++|+ +++|++++.||.|++||++ ....+..+..|...|.+++|+|++++|++++.||
T Consensus 162 d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 162 DVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 999999999999999999999994 6799999999999999998 5667888889999999999999999999999999
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
.|++ ||++++.. +..+..|... +
T Consensus 240 ~v~i-------------wd~~~~~~--------------------~~~~~~~~~~-------v----------------- 262 (401)
T 4aez_A 240 VVQI-------------WDARSSIP--------------------KFTKTNHNAA-------V----------------- 262 (401)
T ss_dssp CEEE-------------EETTCSSE--------------------EEEECCCSSC-------C-----------------
T ss_pred eEEE-------------ccCCCCCc--------------------cEEecCCcce-------E-----------------
Confidence 9999 99998766 5555555444 4
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe--CCCeEEEEECCCCeEEEEecCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS--ADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs--~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
.+++|+|++. . ++++|+ .|+.|++||+.+++++..+. +.
T Consensus 263 ----------~~~~~~p~~~------------------------~----ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~ 303 (401)
T 4aez_A 263 ----------KAVAWCPWQS------------------------N----LLATGGGTMDKQIHFWNAATGARVNTVD-AG 303 (401)
T ss_dssp ----------CEEEECTTST------------------------T----EEEEECCTTTCEEEEEETTTCCEEEEEE-CS
T ss_pred ----------EEEEECCCCC------------------------C----EEEEecCCCCCEEEEEECCCCCEEEEEe-CC
Confidence 5555555443 1 777765 79999999999999998886 56
Q ss_pred CCEEEEEEeCCCCEEEEEe--CCC-EEEEEecCCceEE--EecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 323 STIRRLTFSEGGECLLGGD--TEG-LKVYGWEPARQYD--AQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 323 ~~VtslafSpdG~~Lasgs--~DG-I~IWDl~tgk~l~--tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
..|.+++|+|+|++|++++ .|+ |++|++.+++... .+.+|...|.+++|+ ++++|+++ +.+|.+..
T Consensus 304 ~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 304 SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 7899999999999999954 788 9999999976554 467899999999999 89988887 99997753
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-30 Score=296.77 Aligned_cols=277 Identities=21% Similarity=0.393 Sum_probs=243.2
Q ss_pred eeEEeccCCCcE-EEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 7 KAEDFMAHGASV-NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 7 ~l~~L~gH~~~V-~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
....+.+|.+.| .|+.+ ++++|++|+.||+|++||+.+++.+..+.+|...|.+++|++++ +|++|+.||+|++|
T Consensus 113 ~~~~l~~h~~~v~~~~~~---~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF---EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEEEECCSSSCEEEEEE---ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred ceEEEcCCCCCcEEEEEE---CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 356899999885 67776 45799999999999999999999999999999999999999987 99999999999999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEc--cCCCEEEEEECCCeEEEEECCCCce-----------------------EEEEcC
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFH--PYGDYLCSGSLDSFIKLWDLRRKGC-----------------------IYTYRG 140 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafs--pdg~~Lasgs~DG~I~IWDl~t~~~-----------------------l~~~~~ 140 (845)
|+.+++.+..+.+|...|.+++|+ ++++++++|+.||.|++||+.++.. +..+.+
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 999999999999999999999999 4778999999999999999987652 556777
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 141 h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
|...+.++ +++++++++++.||.|++ ||+.+++. +..+.+|...
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~~i~v-------------wd~~~~~~--------------------~~~~~~~~~~- 312 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDNTLIV-------------WDVAQMKC--------------------LYILSGHTDR- 312 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTSCEEE-------------EETTTTEE--------------------EEEECCCSSC-
T ss_pred ccceEEEE--cCCCCEEEEEeCCCeEEE-------------EECCCCcE--------------------EEEecCCCCC-
Confidence 88888876 567999999999999999 99998877 6666666655
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
+ .+++|+|++. ++++|+.
T Consensus 313 ------v---------------------------~~~~~~~~~~-----------------------------~l~sg~~ 330 (464)
T 3v7d_B 313 ------I---------------------------YSTIYDHERK-----------------------------RCISASM 330 (464)
T ss_dssp ------E---------------------------EEEEEETTTT-----------------------------EEEEEET
T ss_pred ------E---------------------------EEEEEcCCCC-----------------------------EEEEEeC
Confidence 5 6666666666 9999999
Q ss_pred CCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEE
Q psy467 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWF 378 (845)
Q Consensus 301 DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLa 378 (845)
||.|++||+.+++++.++.+|...|.+++|+ +.+|++++.|+ |++||+.++....... |...+..++|+ ++++++
T Consensus 331 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 407 (464)
T 3v7d_B 331 DTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILV 407 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEE
T ss_pred CCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEE
Confidence 9999999999999999999999999999997 57999999999 9999999987665553 66778888999 888888
Q ss_pred EE----EEEEeeCC
Q psy467 379 RR----VGTWSHQD 388 (845)
Q Consensus 379 aS----VsiW~~d~ 388 (845)
++ |.+|....
T Consensus 408 ~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 408 SGSENQFNIYNLRS 421 (464)
T ss_dssp EEETTEEEEEETTT
T ss_pred EecCCeEEEEECCC
Confidence 88 99997654
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=299.65 Aligned_cols=253 Identities=20% Similarity=0.257 Sum_probs=203.0
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe--eEEEecCCCCCeEEEEEcC--CCCEEEEEECCCcEEEE
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGN--GEETLSAGCQSGSIKIW 85 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSp--dg~~LaSgs~DGtV~VW 85 (845)
.+.+|.+.|++++|+| +|++||+|+.|++|+|||+.++. .+..+.+|...|.+++|++ ++++|++|+.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 4679999999999999 99999999999999999998764 4678899999999999986 48999999999999999
Q ss_pred ECCCC--cEEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCce---EEEEcCCCCCeEEEEEecC-----
Q psy467 86 NLAVP--TVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGC---IYTYRGHSKSINSIRFSPD----- 153 (845)
Q Consensus 86 Dl~tg--~~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~~---l~~~~~h~~~V~sLafSPd----- 153 (845)
|++++ .....+.+|...|.+++|+|+ +.+|++|+.|+.|++||++.+.. ...+.+|...|.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 99987 466778899999999999998 78999999999999999987532 3445678889999999997
Q ss_pred ------------CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCc
Q psy467 154 ------------GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGT 221 (845)
Q Consensus 154 ------------g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~ 221 (845)
+++|++|+.|+.|++ ||++..... ..+..+.+|...
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~l-------------Wd~~~~~~~-----------------~~~~~l~~h~~~-- 214 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKL-------------WKEEEDGQW-----------------KEEQKLEAHSDW-- 214 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCE-------------EEECTTSCE-----------------EEEECCBCCSSC--
T ss_pred ccccccccCccccceEEEecCCCeEEE-------------EEeCCCCcc-----------------ceeeecccCCCc--
Confidence 468999999999999 998654210 013344555554
Q ss_pred cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 222 KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 222 ~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
| .+++|+|++. .++. +|++|+.|
T Consensus 215 -----V---------------------------~~v~~sp~~~--------------------~~~~-----~las~s~D 237 (316)
T 3bg1_A 215 -----V---------------------------RDVAWAPSIG--------------------LPTS-----TIASCSQD 237 (316)
T ss_dssp -----E---------------------------EEEECCCCSS--------------------CSCC-----EEEEEETT
T ss_pred -----e---------------------------EEEEecCCCC--------------------CCCc-----eEEEEcCC
Confidence 4 5556665541 0012 89999999
Q ss_pred CeEEEEECCCC---e-EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 302 RTVNFWDLEKF---S-LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 302 G~I~IWDl~s~---~-~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
++|++||+.+. . ....+..|...|.+++|+|+|++||+++.|+ |+||+...
T Consensus 238 ~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 238 GRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred CeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 99999998762 1 2234556888999999999999999999999 99999863
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-32 Score=291.30 Aligned_cols=271 Identities=14% Similarity=0.135 Sum_probs=230.6
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe---eEEEecCCCCCeEEEEEcCCCC-EEEEEECCCcEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN---CIMSLSGHSTPVESVQFGNGEE-TLSAGCQSGSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~---~i~~l~~h~~~V~sLafSpdg~-~LaSgs~DGtV~V 84 (845)
+...+|.+.|++++|+| ++++|++++.||.|++|++.++. ....+.+|...|.+++|+|+++ +|++|+.||.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp ECSSCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ecccCCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 34568999999999999 99999999999999999998776 3455668999999999999999 9999999999999
Q ss_pred EEC-CCCcEEEEEcC--CCCCeEEEEEccCCCEEEEEECCCeEEEEECCC---------CceEEEEcCCCCCeEEEEEec
Q psy467 85 WNL-AVPTVQRTLNG--HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR---------KGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 85 WDl-~tg~~v~~l~~--h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t---------~~~l~~~~~h~~~V~sLafSP 152 (845)
||+ .+++. ..+.+ |...|.+++|+| +++|++++.|+.|++||+++ ++++..+. |...|.+++|+|
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC
Confidence 999 87754 77788 999999999999 99999999999999999987 66666666 888999999998
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++ +++++.|+.|++ ||+++ +.... ......+..
T Consensus 161 ~~--l~~~~~d~~i~i-------------~d~~~~~~~~~------------------~~~~~~~~~------------- 194 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQW-------------FRLPLCEDDNG------------------TIEESGLKY------------- 194 (342)
T ss_dssp SE--EEEEESTTEEEE-------------EESSCCTTCCC------------------EEEECSCSS-------------
T ss_pred Cc--EEEEeCCCeEEE-------------EECCccccccc------------------eeeecCCCC-------------
Confidence 87 999999999999 99987 44300 111111222
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC-CCCcccceEEEEEeCCCeEEEEECC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP-QSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP-dg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
.+.+++|+| +++ ++++++.||.|++||++
T Consensus 195 ---------------------------------------------~i~~i~~~~~~~~-----~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 195 ---------------------------------------------QIRDVALLPKEQE-----GYACSSIDGRVAVEFFD 224 (342)
T ss_dssp ---------------------------------------------CEEEEEECSGGGC-----EEEEEETTSEEEEEECC
T ss_pred ---------------------------------------------ceeEEEECCCCCC-----EEEEEecCCcEEEEEEc
Confidence 234445555 444 99999999999999998
Q ss_pred CC------eEEEEecCCCC---------CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCC-CCCeEEEEEcC
Q psy467 311 KF------SLVSTTEKNSS---------TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMG-WGKVQDLAVTG 373 (845)
Q Consensus 311 s~------~~l~tl~gh~~---------~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h-~~~VtsVafSd 373 (845)
.. +....+..|.. .|++++|+|++++|++++.|| |++||+.+++.+..+.+| ...|++++ .+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~-~~ 303 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA-CS 303 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE-EC
T ss_pred CCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec-CC
Confidence 77 77788888755 999999999999999999999 999999999999999998 99999999 88
Q ss_pred CceEEEE
Q psy467 374 TQLWFRR 380 (845)
Q Consensus 374 g~lLaaS 380 (845)
+++|+++
T Consensus 304 ~~~l~s~ 310 (342)
T 1yfq_A 304 DNILCLA 310 (342)
T ss_dssp SSEEEEE
T ss_pred CCeEEEE
Confidence 8877766
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=309.22 Aligned_cols=285 Identities=12% Similarity=0.170 Sum_probs=228.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIW 85 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VW 85 (845)
....+|...|+||+|+|.++++||+|+.||.|+|||+.+++. ...+.+|...|++|+|+| ++++|++|+.||+|++|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 456789999999999997788999999999999999977654 445678999999999998 78999999999999999
Q ss_pred ECCCCcEEEEEcC--CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCC-EEEEEeC
Q psy467 86 NLAVPTVQRTLNG--HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ-WIASGGE 162 (845)
Q Consensus 86 Dl~tg~~v~~l~~--h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~-~Lasgs~ 162 (845)
|++++........ +...+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|.+++|+|++. +|++++.
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecC
Confidence 9987654444333 34467899999999999999999999999996 466778889999999999999876 7889999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
|+.|++ ||+++.+....+ ....+|.
T Consensus 272 d~~v~i-------------wd~~~~~~~~~~-----------------~~~~~h~------------------------- 296 (435)
T 4e54_B 272 DQTVKI-------------WDLRQVRGKASF-----------------LYSLPHR------------------------- 296 (435)
T ss_dssp TSBCCE-------------EETTTCCSSSCC-----------------SBCCBCS-------------------------
T ss_pred cceeeE-------------EecccccccceE-----------------EEeeecc-------------------------
Confidence 999999 999876651110 0011222
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
..|++++|+|+|+ +|++|+.||.|+|||+.++.+...+..|.
T Consensus 297 ---------------------------------~~v~~~~~spdg~-----~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 297 ---------------------------------HPVNAACFSPDGA-----RLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp ---------------------------------SCEEECCBCTTSS-----EEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred ---------------------------------ccccceeECCCCC-----eeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 3345555666665 99999999999999999998887777654
Q ss_pred C------CEEEEEEeCCCCEEEEEe------------CCC-EEEEEecCCceEEEec-CCCCCeEEE-EEc-CCceEEEE
Q psy467 323 S------TIRRLTFSEGGECLLGGD------------TEG-LKVYGWEPARQYDAQP-MGWGKVQDL-AVT-GTQLWFRR 380 (845)
Q Consensus 323 ~------~VtslafSpdG~~Lasgs------------~DG-I~IWDl~tgk~l~tl~-~h~~~VtsV-afS-dg~lLaaS 380 (845)
. .+....|+|++.+++++. .++ |++||..+++++..+. +|...|.++ +|+ +|++|+++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg 418 (435)
T 4e54_B 339 HRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASA 418 (435)
T ss_dssp CCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEE
T ss_pred ccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEE
Confidence 2 234567777777777664 234 9999999999988765 678888887 699 99999887
Q ss_pred ----EEEEeeC
Q psy467 381 ----VGTWSHQ 387 (845)
Q Consensus 381 ----VsiW~~d 387 (845)
|.+|...
T Consensus 419 ~d~~i~iW~~~ 429 (435)
T 4e54_B 419 MGYHILIWSQQ 429 (435)
T ss_dssp CSSEEEECCCC
T ss_pred cCCcEEEEECC
Confidence 9999764
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-31 Score=291.23 Aligned_cols=259 Identities=21% Similarity=0.298 Sum_probs=215.2
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC--CCeeEEEecCCCCCeEEEEEcCC--CCEEEEEECCCcEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG--KSNCIMSLSGHSTPVESVQFGNG--EETLSAGCQSGSIK 83 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~--t~~~i~~l~~h~~~V~sLafSpd--g~~LaSgs~DGtV~ 83 (845)
++.+.+|.+.|++++|+| ++++||+|+.||.|+||++. +++.+..+.+|...|.+++|+++ +++|++++.||.|+
T Consensus 4 ~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp -CCEEECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cEEecCCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 457899999999999999 99999999999999999997 56778889999999999999987 99999999999999
Q ss_pred EEECCCCc--EEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCCeEEEEEec-----
Q psy467 84 IWNLAVPT--VQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSP----- 152 (845)
Q Consensus 84 VWDl~tg~--~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~V~sLafSP----- 152 (845)
+||+.+++ .+..+..|...|.+++|+|+ +.+|++++.||.|++||++++. ....+..|...|.+++|+|
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99999987 77788889999999999999 9999999999999999998773 4456678999999999999
Q ss_pred --------CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 153 --------DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 153 --------dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
++.+|++++.||.|++ ||++++... ...+..+.+|...
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i-------------~d~~~~~~~----------------~~~~~~~~~h~~~----- 208 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKI-------------WKYNSDAQT----------------YVLESTLEGHSDW----- 208 (379)
T ss_dssp -------CTTCEEEEEETTSCEEE-------------EEEETTTTE----------------EEEEEEECCCSSC-----
T ss_pred cccccCCCCCCEEEEEeCCCeEEE-------------EEecCCCcc----------------eeeEEEEecccCc-----
Confidence 6999999999999999 999866540 0012333334333
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ .+++|+|++. .+. +|++++.||.|
T Consensus 209 --v---------------------------~~~~~sp~~~---------------------~~~-----~l~s~~~dg~i 233 (379)
T 3jrp_A 209 --V---------------------------RDVAWSPTVL---------------------LRS-----YLASVSQDRTC 233 (379)
T ss_dssp --E---------------------------EEEEECCCCS---------------------SSE-----EEEEEETTSCE
T ss_pred --E---------------------------eEEEECCCCC---------------------CCC-----eEEEEeCCCEE
Confidence 3 4444444410 034 99999999999
Q ss_pred EEEECCCCe---EEEEe--cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceE
Q psy467 305 NFWDLEKFS---LVSTT--EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQY 356 (845)
Q Consensus 305 ~IWDl~s~~---~l~tl--~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l 356 (845)
++||+.++. ....+ ..|...|++++|+|+|++|++++.|| |++|++..+...
T Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 234 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred EEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence 999998863 22333 34888999999999999999999999 999999865443
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-33 Score=307.16 Aligned_cols=284 Identities=17% Similarity=0.274 Sum_probs=238.3
Q ss_pred CCcEEEEEEecCCCC-EEEEE----------eCCCeEEEEECCCCe---eEEEecCCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 15 GASVNCLALGKKSGQ-VLATG----------GDDKKVNLWALGKSN---CIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 15 ~~~V~~LafSp~dg~-~LaTg----------s~DG~I~IWdl~t~~---~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
...|.+++|+| +++ +|++| +.|+.|+||++.++. .+..+ .|...|.+++|+|++++|++++.||
T Consensus 12 ~~~v~~~~~sp-~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 12 FSRTATFAWSH-DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEESCBCCBCS-SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhcceEeeCC-CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 34789999999 665 99999 889999999998775 33334 4889999999999999999999999
Q ss_pred cEEEEECCC----CcEEEEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCc------eEEE---EcCCCCCeE
Q psy467 81 SIKIWNLAV----PTVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKG------CIYT---YRGHSKSIN 146 (845)
Q Consensus 81 tV~VWDl~t----g~~v~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~------~l~~---~~~h~~~V~ 146 (845)
.|++||+.+ .+.+..+.+|...|.+++|+|+ +++|++++.||.|++||+.+++ .... +..|...|.
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 999999987 4588889999999999999998 8999999999999999998876 3322 356889999
Q ss_pred EEEEecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 147 SIRFSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 147 sLafSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+++|+|+ +.+|++++.||.|++ ||+++++. +..+..+...
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~i-------------wd~~~~~~--------------------~~~~~~~~~~------ 210 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASI-------------WDLKAKKE--------------------VIHLSYTSPN------ 210 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEE-------------EETTTTEE--------------------EEEECCCCCS------
T ss_pred EEEeCCCCCcEEEEEcCCCCEEE-------------EECCCCCc--------------------ceEEeccccc------
Confidence 9999998 789999999999999 99998776 4444332110
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC---
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR--- 302 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG--- 302 (845)
..+...+.+++|+|++.. ++++++.|+
T Consensus 211 ----------------------------------------------~~~~~~v~~~~~~~~~~~----~l~~~~~d~~~~ 240 (416)
T 2pm9_A 211 ----------------------------------------------SGIKQQLSVVEWHPKNST----RVATATGSDNDP 240 (416)
T ss_dssp ----------------------------------------------SCCCCCEEEEEECSSCTT----EEEEEECCSSSC
T ss_pred ----------------------------------------------cccCCceEEEEECCCCCC----EEEEEECCCCCc
Confidence 001233455556665422 899999998
Q ss_pred eEEEEECCCC-eEEEEec-CCCCCEEEEEEeC-CCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CC-ce
Q psy467 303 TVNFWDLEKF-SLVSTTE-KNSSTIRRLTFSE-GGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GT-QL 376 (845)
Q Consensus 303 ~I~IWDl~s~-~~l~tl~-gh~~~VtslafSp-dG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg-~l 376 (845)
.|++||++++ .++..+. +|...|++++|+| ++++|++++.|+ |++||+.+++.+..+.+|...|++++|+ ++ ++
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDL 320 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTE
T ss_pred eEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCE
Confidence 9999999986 6777888 8999999999999 999999999999 9999999999999999999999999999 77 67
Q ss_pred EEEE-----EEEEeeCCC
Q psy467 377 WFRR-----VGTWSHQDS 389 (845)
Q Consensus 377 LaaS-----VsiW~~d~~ 389 (845)
++++ |.+|.+...
T Consensus 321 l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 321 FACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEECCSSSEEEEEESCCC
T ss_pred EEEEecCCcEEEEEccCC
Confidence 7766 999987644
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-31 Score=289.13 Aligned_cols=283 Identities=12% Similarity=0.158 Sum_probs=232.6
Q ss_pred eeeeeEEeccCCCcEEEEEEecCC--CCEEEEEeCCCeEEEEECCC-CeeE-EEecCCCCCeEEEEEcCCCCEEEEEECC
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKS--GQVLATGGDDKKVNLWALGK-SNCI-MSLSGHSTPVESVQFGNGEETLSAGCQS 79 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~d--g~~LaTgs~DG~I~IWdl~t-~~~i-~~l~~h~~~V~sLafSpdg~~LaSgs~D 79 (845)
..+.++.+.+|.+.|+|++|+|+. |++|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+|++++|++++.|
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 345678899999999999999933 79999999999999999986 5544 7888999999999999999999999999
Q ss_pred CcEEEEECCCCcEEEEEcCCCCCeEEEEE--ccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDF--HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~~h~~~V~~laf--spdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
|.|++||+.+++.+.. ..|...|.+++| ++++++|++++.||.|++||+++++.+..+..+. .+.++.+. +..+
T Consensus 108 g~v~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~ 183 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQI-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMA 183 (368)
T ss_dssp SEEEEEETTTTEEEEE-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEE
T ss_pred CcEEEEEcCCCCceee-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCee
Confidence 9999999999887764 459999999999 8899999999999999999999999998888654 56677776 4588
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
++++.++.+.+ |++..... .......... .. .
T Consensus 184 ~~~~~~~~i~~-------------~~~~~~~~--------------------~~~~~~~~~~---~~--~---------- 215 (368)
T 3mmy_A 184 VVATAERGLIV-------------YQLENQPS--------------------EFRRIESPLK---HQ--H---------- 215 (368)
T ss_dssp EEEEGGGCEEE-------------EECSSSCE--------------------EEEECCCSCS---SC--E----------
T ss_pred EEEeCCCcEEE-------------EEeccccc--------------------hhhhcccccc---CC--C----------
Confidence 89999999999 99876543 1111000000 00 1
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC---eE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF---SL 314 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~---~~ 314 (845)
..+.+.++.. .. ...+++++.||.|++||++.. ..
T Consensus 216 -----------------~~~~~~~~~~----------------------~~---~~~~~~~~~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 216 -----------------RCVAIFKDKQ----------------------NK---PTGFALGSIEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp -----------------EEEEEEECTT----------------------SC---EEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred -----------------ceEEEcccCC----------------------CC---CCeEEEecCCCcEEEEecCCCCcccc
Confidence 2333333322 00 015999999999999999887 55
Q ss_pred EEEecCCCC------------CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 315 VSTTEKNSS------------TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 315 l~tl~gh~~------------~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
+..+.+|.. .|++++|+|++++|++++.|| |++||+.+++++..+.+|...|++++|+ +|++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEE
T ss_pred ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEE
Confidence 677777765 799999999999999999999 9999999999999999999999999999 88888877
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-30 Score=291.55 Aligned_cols=305 Identities=20% Similarity=0.361 Sum_probs=204.6
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
....+.|+.++. ++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ +++|++|+.||+|++||+.+++.+
T Consensus 118 ~~~v~~~~~~~g---~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~ 192 (445)
T 2ovr_B 118 DDHVITCLQFCG---NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECI 192 (445)
T ss_dssp TTSCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCcEEEEEEcC---CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEE
Confidence 344566677777 467777777777777777777777777777777777776 456777777777777777777777
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
..+.+|...|.+++|+ ++.+++|+.||.|++||+.+++.+..+.+|...|.+++| +++++++++.||.|++
T Consensus 193 ~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i----- 263 (445)
T 2ovr_B 193 HTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV----- 263 (445)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEE-----
T ss_pred EEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEE-----
Confidence 7777777777777774 456777777777777777777777777677777777777 4666777777777777
Q ss_pred cCCceeEEEECCCCccCCCCC--CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPP--PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIAN 251 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~--~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~ 251 (845)
||+++++.+..+. ...+.++.+ ++..+..... ++.+.+|++....
T Consensus 264 --------wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~------d~~i~i~d~~~~~----------------- 310 (445)
T 2ovr_B 264 --------WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL------DTSIRVWDVETGN----------------- 310 (445)
T ss_dssp --------EEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEET------TSCEEEEETTTCC-----------------
T ss_pred --------EECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeC------CCeEEEEECCCCC-----------------
Confidence 6666666543322 233344444 3333332111 1112222221100
Q ss_pred CCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC---CCCCEEEE
Q psy467 252 PCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK---NSSTIRRL 328 (845)
Q Consensus 252 ~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g---h~~~Vtsl 328 (845)
....+. .+...+.+++++ ++ ++++|+.||.|++||+.+++++..+.+ |...|+++
T Consensus 311 ---~~~~~~------------~~~~~v~~~~~~--~~-----~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 311 ---CIHTLT------------GHQSLTSGMELK--DN-----ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 368 (445)
T ss_dssp ---EEEEEC------------CCCSCEEEEEEE--TT-----EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEE
T ss_pred ---EEEEEc------------CCcccEEEEEEe--CC-----EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEE
Confidence 000010 112233444443 33 899999999999999999999999986 88899999
Q ss_pred EEeCCCCEEEEEeCCC-EEEEEecCCceEEEe-----cCCCCCeEEEEEc-CCceEEEE---------EEEEeeCCC
Q psy467 329 TFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ-----PMGWGKVQDLAVT-GTQLWFRR---------VGTWSHQDS 389 (845)
Q Consensus 329 afSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl-----~~h~~~VtsVafS-dg~lLaaS---------VsiW~~d~~ 389 (845)
+|+ +++|++|+.|| |++||+.+++.+..+ ..|.+.|++++|+ ++.+++++ +.+|..+..
T Consensus 369 ~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 369 QFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 995 67999999999 999999999998887 4678899999999 77887776 667766543
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-31 Score=283.39 Aligned_cols=276 Identities=18% Similarity=0.223 Sum_probs=236.1
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE-
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV- 92 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~- 92 (845)
|.+.|.+++|+| +|++++++..++.+.+|............+|...|.+++|+|++++|++++ ||.|++||+.++..
T Consensus 8 ~~~~v~~~~~s~-dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 8 GSKPAYSFHVTA-DGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEECCEEEECS-SSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred cCCceeEEEECC-CCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence 567899999999 999999998888787777665555555567999999999999999999998 99999999987653
Q ss_pred --EEEEc--CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 93 --QRTLN--GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 93 --v~~l~--~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
+..+. .|...|.+++|+|++++|++++.||.|++||+.+++ ....+..|...|.+++|+|+++++++++.||.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 23333 688999999999999999999999999999999877 667778899999999999999999999999999
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
++ ||+++++. +..+..|... +
T Consensus 166 ~~-------------~d~~~~~~--------------------~~~~~~~~~~-------i------------------- 186 (337)
T 1gxr_A 166 AV-------------WDLHNQTL--------------------VRQFQGHTDG-------A------------------- 186 (337)
T ss_dssp EE-------------EETTTTEE--------------------EEEECCCSSC-------E-------------------
T ss_pred EE-------------EeCCCCce--------------------eeeeecccCc-------e-------------------
Confidence 99 99988776 5555555544 4
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEE
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vt 326 (845)
..++|+|++. +|++++.||.|++||+++++.+..+. +...+.
T Consensus 187 --------~~~~~~~~~~-----------------------------~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~ 228 (337)
T 1gxr_A 187 --------SCIDISNDGT-----------------------------KLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIF 228 (337)
T ss_dssp --------EEEEECTTSS-----------------------------EEEEEETTSEEEEEETTTTEEEEEEE-CSSCEE
T ss_pred --------EEEEECCCCC-----------------------------EEEEEecCCcEEEEECCCCceEeeec-CCCceE
Confidence 5566666655 99999999999999999999888775 678899
Q ss_pred EEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 327 RLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 327 slafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
+++|+|++++|++++.++ |++||+.+++. ..+..|...|++++|+ ++++++++ +.+|.....
T Consensus 229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 999999999999999999 99999998775 4677899999999999 88888877 899976543
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-31 Score=296.23 Aligned_cols=270 Identities=21% Similarity=0.404 Sum_probs=237.3
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg 90 (845)
..+|...|.|+++ ++++|++|+.||.|++||+.+++.+..+.+|...|.+++| ++++|++|+.||.|++||+.++
T Consensus 129 ~~~~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 129 RSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CCSSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred ccCCCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 3467778999988 6799999999999999999999999999999999999999 7889999999999999999999
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE---EEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI---YTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l---~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
+.+..+.+|...|.+++|+ +.++++|+.||.|++||+.++... ..+.+|...|.+++| +++++++++.||.|+
T Consensus 204 ~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 204 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 279 (435)
T ss_dssp CEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred cEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEE
Confidence 9999999999999999997 459999999999999999887655 677889999999999 589999999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ ||+++++. +..+.+|... +
T Consensus 280 v-------------wd~~~~~~--------------------~~~~~~~~~~-------v-------------------- 299 (435)
T 1p22_A 280 V-------------WNTSTCEF--------------------VRTLNGHKRG-------I-------------------- 299 (435)
T ss_dssp E-------------EETTTCCE--------------------EEEEECCSSC-------E--------------------
T ss_pred E-------------EECCcCcE--------------------EEEEcCCCCc-------E--------------------
Confidence 9 99998877 6677766665 5
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts 327 (845)
.++.+ ++. ++++|+.||.|++||+++++++.++.+|...|.+
T Consensus 300 -------~~~~~--~~~-----------------------------~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 341 (435)
T 1p22_A 300 -------ACLQY--RDR-----------------------------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 341 (435)
T ss_dssp -------EEEEE--ETT-----------------------------EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred -------EEEEe--CCC-----------------------------EEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEE
Confidence 55555 234 8999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCc---------eEEEecCCCCCeEEEEEcCCceEEEE-----EEEEeeCCCC
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPAR---------QYDAQPMGWGKVQDLAVTGTQLWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk---------~l~tl~~h~~~VtsVafSdg~lLaaS-----VsiW~~d~~~ 390 (845)
++| ++.+|++|+.|| |++||+.+++ ++..+.+|.+.|++++| ++++|+++ |.+|.+....
T Consensus 342 ~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 342 IRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp EEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE-CSSCEEECCSSSEEEEEC-----
T ss_pred EEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe-CCCEEEEEeCCCEEEEEECCCCC
Confidence 999 788999999999 9999998766 88899999999999999 56666665 9999876543
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-31 Score=290.58 Aligned_cols=278 Identities=17% Similarity=0.208 Sum_probs=234.6
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
|.+.|++++|+| ++++|++|+.||.|++|+ .+++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus 107 ~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 107 TTNQVTCLAWSH-DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp -CBCEEEEEECT-TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCceEEEEEcC-CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 688999999999 999999999999999999 678889999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCC---------------eEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 94 RTLNGHKSS---------------ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 94 ~~l~~h~~~---------------V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
..+..+... +.+++|++++ .+++++.+|.|++||+.+++.+..+..|...|.+++|+|++++|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 263 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL 263 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEE
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEE
Confidence 999877776 9999999975 688999999999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+++.||.|++ ||+.+++.+... +...+..+.|+|++ .+.... . ...+.+|++....
T Consensus 264 ~~~~d~~i~i-------------~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~-~-----d~~i~i~d~~~~~-- 321 (425)
T 1r5m_A 264 SASDDGTLRI-------------WHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCS-M-----DGSVRLWSLKQNT-- 321 (425)
T ss_dssp EEETTSCEEE-------------ECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEE-T-----TSEEEEEETTTTE--
T ss_pred EEcCCCEEEE-------------EECCCCccceEecCCCccEEEEEECCCC-EEEEEe-C-----CCcEEEEECCCCc--
Confidence 9999999999 999987765443 35678899999998 444322 1 1233343332110
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe---
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS--- 313 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~--- 313 (845)
....+. .+...+.+++|+|+++ +|++++.||.|++||+.+++
T Consensus 322 ------------------~~~~~~------------~~~~~i~~~~~s~~~~-----~l~~~~~dg~i~i~~~~~~~~~~ 366 (425)
T 1r5m_A 322 ------------------LLALSI------------VDGVPIFAGRISQDGQ-----KYAVAFMDGQVNVYDLKKLNSKS 366 (425)
T ss_dssp ------------------EEEEEE------------CTTCCEEEEEECTTSS-----EEEEEETTSCEEEEECHHHHC--
T ss_pred ------------------EeEecc------------cCCccEEEEEEcCCCC-----EEEEEECCCeEEEEECCCCccce
Confidence 011111 1235688999999998 99999999999999999888
Q ss_pred -----------------EEEEecCCCC--CEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 314 -----------------LVSTTEKNSS--TIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 314 -----------------~l~tl~gh~~--~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
++..+.+|.. .|++++|+|++++|++++.|| |++|+++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 367 RSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 8999999976 999999999999999999999 9999985
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-30 Score=276.42 Aligned_cols=254 Identities=24% Similarity=0.401 Sum_probs=220.0
Q ss_pred cceeeee-----------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCC
Q psy467 2 RAKVEKA-----------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~l-----------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg 70 (845)
++++|++ +.+.+|...|.+++|+| ++++|++++.|+.|++|+............+...+..+.+++++
T Consensus 62 ~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (340)
T 4aow_A 62 TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 140 (340)
T ss_dssp CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecC
Confidence 4788874 56889999999999999 99999999999999999999999999899899999999999999
Q ss_pred CEEEEEECCCcEEEEECCCCcEE-EEEcCCCCCeEEEEEccCC--CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEE
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDFHPYG--DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v-~~l~~h~~~V~~lafspdg--~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~s 147 (845)
.+|++++.|+.+++||+...... ....+|...+.+++|++++ .++++++.|+.|++||+++++.+..+.+|...|.+
T Consensus 141 ~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~ 220 (340)
T 4aow_A 141 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 220 (340)
T ss_dssp SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEE
Confidence 99999999999999999876543 3456788999999999865 57899999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeE
Q psy467 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
++|+|++++|++++.||.|++ ||+.+.+. +..+..+. . +
T Consensus 221 ~~~s~~~~~l~s~s~Dg~i~i-------------wd~~~~~~--------------------~~~~~~~~-~-------v 259 (340)
T 4aow_A 221 VTVSPDGSLCASGGKDGQAML-------------WDLNEGKH--------------------LYTLDGGD-I-------I 259 (340)
T ss_dssp EEECTTSSEEEEEETTCEEEE-------------EETTTTEE--------------------EEEEECSS-C-------E
T ss_pred EEECCCCCEEEEEeCCCeEEE-------------EEeccCce--------------------eeeecCCc-e-------E
Confidence 999999999999999999999 99998776 54444332 2 3
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEE
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IW 307 (845)
..+.|+|++. +++++.|+.|++|
T Consensus 260 ---------------------------~~~~~~~~~~------------------------------~~~~~~d~~i~iw 282 (340)
T 4aow_A 260 ---------------------------NALCFSPNRY------------------------------WLCAATGPSIKIW 282 (340)
T ss_dssp ---------------------------EEEEECSSSS------------------------------EEEEEETTEEEEE
T ss_pred ---------------------------EeeecCCCCc------------------------------eeeccCCCEEEEE
Confidence 4555555544 4566679999999
Q ss_pred ECCCCeEEEEec---------CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc
Q psy467 308 DLEKFSLVSTTE---------KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 308 Dl~s~~~l~tl~---------gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk 354 (845)
|++++..+..+. +|...|++++|+|||++|++|+.|| |+|||+.+|.
T Consensus 283 d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 283 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 999988776654 5788999999999999999999999 9999999985
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-30 Score=320.90 Aligned_cols=349 Identities=9% Similarity=0.020 Sum_probs=246.6
Q ss_pred cceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE-----------EEecCCCCCeEEE
Q psy467 2 RAKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI-----------MSLSGHSTPVESV 64 (845)
Q Consensus 2 ~irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i-----------~~l~~h~~~V~sL 64 (845)
++++|++ +.+. |.+.|++++|+| ++++|++|+.||.|++||+.+++.. ..+.+|...|.++
T Consensus 80 ~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl 157 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTTVF-VPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI 157 (902)
T ss_dssp EEEEEETTTCSEEEEEE-CSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE
T ss_pred eEEEEECCCCcEEEEEc-CCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEE
Confidence 4678874 4554 778999999999 9999999999999999999988764 2346799999999
Q ss_pred EEcCC-CCEEEEEECCCcEEEEECCCCcEEEEEcCC------------------CCCeEEEEEccCCCEEEEEECCCeEE
Q psy467 65 QFGNG-EETLSAGCQSGSIKIWNLAVPTVQRTLNGH------------------KSSITSVDFHPYGDYLCSGSLDSFIK 125 (845)
Q Consensus 65 afSpd-g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h------------------~~~V~~lafspdg~~Lasgs~DG~I~ 125 (845)
+|+|+ +..|++|+.||.| +||+++++.+..+..| ...|.+++|+|+|++|++|+.||.|+
T Consensus 158 ~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~ 236 (902)
T 2oaj_A 158 QWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLV 236 (902)
T ss_dssp EEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEE
T ss_pred EEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEE
Confidence 99996 5789999999999 9999999998888765 46799999999999999999999999
Q ss_pred EEECCCCceEEE--Ec---C-------------CCCCeEEEEEec----CC-CEEEEEeCCC-----cEEEeeee-----
Q psy467 126 LWDLRRKGCIYT--YR---G-------------HSKSINSIRFSP----DG-QWIASGGEDG-----VVRIGASF----- 172 (845)
Q Consensus 126 IWDl~t~~~l~~--~~---~-------------h~~~V~sLafSP----dg-~~Lasgs~DG-----~I~I~~~~----- 172 (845)
+||+++++++.. +. . |...|.+++|++ ++ .+|++|+.|. .+.+|..-
T Consensus 237 lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~ 316 (902)
T 2oaj_A 237 FWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRY 316 (902)
T ss_dssp EEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCG
T ss_pred EEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCc
Confidence 999999887754 21 1 244799999964 43 4677776652 55554310
Q ss_pred ---------------------c--------------------------------cCCceeEEEECCCCccCCCC------
Q psy467 173 ---------------------H--------------------------------LTNTSIHVVDLSLVHPLGTP------ 193 (845)
Q Consensus 173 ---------------------~--------------------------------~~~~~I~vWDl~tg~~l~~~------ 193 (845)
. ..++.+.+||+.++......
T Consensus 317 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~ 396 (902)
T 2oaj_A 317 SITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQN 396 (902)
T ss_dssp GGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGG
T ss_pred cccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCc
Confidence 0 01245777777655321110
Q ss_pred ---CCCCCc----------------------------------ceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 194 ---PPQYTS----------------------------------SVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 194 ---~~~~i~----------------------------------svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+...+. .++|+|+++.+++-. . +..+.+|++......
T Consensus 397 l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs--~----DgtVrlWd~~~g~~~ 470 (902)
T 2oaj_A 397 LSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGH--S----NGSVRIYDASHGDIQ 470 (902)
T ss_dssp GTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEE--T----TSEEEEEESSCCTTT
T ss_pred ccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEec--C----CCcEEEEECCCcccc
Confidence 011122 223333333332211 0 112222222111000
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC----
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF---- 312 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~---- 312 (845)
. . ..+..... + .....+...|++++|+|||+ +||+|+.||+|+|||+.++
T Consensus 471 ~--------------~--~~~~~~l~-~----~~~~~h~~~V~svafspdg~-----~LAsgs~DgtV~lwd~~~~~~~~ 524 (902)
T 2oaj_A 471 D--------------N--ASFEVNLS-R----TLNKAKELAVDKISFAAETL-----ELAVSIETGDVVLFKYEVNQFYS 524 (902)
T ss_dssp T--------------T--BCEEEEHH-H----HTTCSSSCCEEEEEEETTTT-----EEEEEETTSCEEEEEEEECCC--
T ss_pred C--------------C--ceEEeech-h----hcCCCCCCceeEEEecCCCC-----eEEEEecCcEEEEEEecCccccC
Confidence 0 0 00000000 0 00013456899999999999 9999999999999998765
Q ss_pred -----------------------------------------eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 313 -----------------------------------------SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 313 -----------------------------------------~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
+++.++.+|.+.|++++||||| +||+|+.|+ |+|||+
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 525 VENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp -------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred ccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 3577888999999999999999 999999999 999999
Q ss_pred cCCceEE-----Eec-CCCCCeEEEEEc-----CC----ceEEEE-----EEEEee
Q psy467 351 EPARQYD-----AQP-MGWGKVQDLAVT-----GT----QLWFRR-----VGTWSH 386 (845)
Q Consensus 351 ~tgk~l~-----tl~-~h~~~VtsVafS-----dg----~lLaaS-----VsiW~~ 386 (845)
+++..+. .+. +|.+.|++|+|+ ++ ++|+++ |.+|.+
T Consensus 604 ~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 604 RGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp TTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred CCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 8877653 233 889999999999 43 677766 999986
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-29 Score=285.59 Aligned_cols=274 Identities=20% Similarity=0.340 Sum_probs=229.8
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec--CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS--GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~ 94 (845)
..+.|+||+ + ++||+|. |++|+|||..+++....+. +|...|++|+|+|+|++|++|+.||.|++||+.+++.+.
T Consensus 107 y~~~l~wS~-~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWSS-G-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEECT-T-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEECC-C-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 467899997 3 5888876 8999999999998877664 678889999999999999999999999999999999999
Q ss_pred EEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 95 TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 95 ~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
.+.+|...+.+++++ +..|++|+.|+.+++||.... ..+..+.+|...+.++.|+|+++++++++.|+.+++
T Consensus 184 ~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i----- 256 (420)
T 4gga_A 184 NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV----- 256 (420)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE-----
T ss_pred EEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceE-----
Confidence 999999999988875 679999999999999999764 456778899999999999999999999999999999
Q ss_pred cCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~ 253 (845)
||..+++.... .+.....|... |
T Consensus 257 --------~~~~~~~~~~~----------------~~~~~~~~~~~-------V-------------------------- 279 (420)
T 4gga_A 257 --------WPSAPGEGGWV----------------PLQTFTQHQGA-------V-------------------------- 279 (420)
T ss_dssp --------EESSCCSSCSC----------------CSEEECCCSSC-------E--------------------------
T ss_pred --------Eeeccccccce----------------eeeeecccCCc-------e--------------------------
Confidence 99987665110 02222333333 3
Q ss_pred ceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE--EeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEe
Q psy467 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS--SSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS 331 (845)
Q Consensus 254 ~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat--gs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafS 331 (845)
..++|+| ++.. ++++ |+.|+.|++||+.+++++..+..| ..+.++.|+
T Consensus 280 -~~~~~~p------------------------~~~~----~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~ 329 (420)
T 4gga_A 280 -KAVAWCP------------------------WQSN----VLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWS 329 (420)
T ss_dssp -EEEEECT------------------------TCTT----EEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEE
T ss_pred -eeeeeCC------------------------Cccc----EEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeec
Confidence 4444444 4332 5554 457999999999999999988865 578999999
Q ss_pred CCCCEEEEEe--CCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 332 EGGECLLGGD--TEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 332 pdG~~Lasgs--~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
++++.+++++ .|+ |+|||+.+++++.++.+|.+.|++++|+ ||++|+++ |.+|.+.
T Consensus 330 ~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 330 PHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp TTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 9999998876 577 9999999999999999999999999999 89888877 9999764
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-31 Score=290.50 Aligned_cols=262 Identities=17% Similarity=0.233 Sum_probs=219.3
Q ss_pred eEEeccCCCcEEEEEEecCC----C---CEEEEEeCCCeEEEEECCCCee-----EEEecCC-----CCCeEEEEEc---
Q psy467 8 AEDFMAHGASVNCLALGKKS----G---QVLATGGDDKKVNLWALGKSNC-----IMSLSGH-----STPVESVQFG--- 67 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~d----g---~~LaTgs~DG~I~IWdl~t~~~-----i~~l~~h-----~~~V~sLafS--- 67 (845)
+..+.+|...|.+++|+| + + ++|++++.||.|++|++.+++. +..+..| ...|.+++|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQ-AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp EEEEECCTTCEEEEEEEE-EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred ceEEecCCCcEEEEEEec-ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 456779999999999999 7 8 9999999999999999988876 8888888 5999999999
Q ss_pred -CCCCE-EEEEECCCcEEEEECCC------CcEEE-----EE-------cCCCCCeEEEEEccCCCEEEEEECCCeEEEE
Q psy467 68 -NGEET-LSAGCQSGSIKIWNLAV------PTVQR-----TL-------NGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127 (845)
Q Consensus 68 -pdg~~-LaSgs~DGtV~VWDl~t------g~~v~-----~l-------~~h~~~V~~lafspdg~~Lasgs~DG~I~IW 127 (845)
|++++ |++++.||.|++||+.+ ++.+. .+ ..|...|.+++|+|++ +|++++.||.|++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999998 65555 66 4588999999999999 99999999999999
Q ss_pred ECCCCceEEEEcC---C---CCCeEEEEEecCCCEEEEEeCC---CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCC
Q psy467 128 DLRRKGCIYTYRG---H---SKSINSIRFSPDGQWIASGGED---GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYT 198 (845)
Q Consensus 128 Dl~t~~~l~~~~~---h---~~~V~sLafSPdg~~Lasgs~D---G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i 198 (845)
|+++++.+..+.. | ...|.+++|+|++++|++++.| |.|++ ||+.+++.
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i-------------~d~~~~~~--------- 270 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITL-------------YETEFGER--------- 270 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEE-------------EETTTCCE---------
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEE-------------EECCCCcc---------
Confidence 9999999999998 8 9999999999999999999999 99999 99998776
Q ss_pred cceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCc
Q psy467 199 SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSR 278 (845)
Q Consensus 199 ~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I 278 (845)
+..+...... - .... ....+...|
T Consensus 271 -----------~~~~~~~~~~-------~----------------------------~~~~----------~~~~~~~~v 294 (397)
T 1sq9_A 271 -----------IGSLSVPTHS-------S----------------------------QASL----------GEFAHSSWV 294 (397)
T ss_dssp -----------EEEECBC-----------------------------------------------------CCBSBSSCE
T ss_pred -----------cceeccCccc-------c----------------------------cccc----------cccccCCcE
Confidence 4444331110 0 0000 001123456
Q ss_pred eeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec------CC---------------CCCEEEEEEeCCC---
Q psy467 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE------KN---------------SSTIRRLTFSEGG--- 334 (845)
Q Consensus 279 ~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~------gh---------------~~~VtslafSpdG--- 334 (845)
.+++|+|+++ +|++++.||.|++||+.+++++..+. +| ...|++++|+|+|
T Consensus 295 ~~~~~~~~~~-----~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~ 369 (397)
T 1sq9_A 295 MSLSFNDSGE-----TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRS 369 (397)
T ss_dssp EEEEECSSSS-----EEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSB
T ss_pred EEEEECCCCC-----EEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccc
Confidence 6777777776 99999999999999999999999999 88 8999999999998
Q ss_pred -------CEEEEEeCCC-EEEEEecCCc
Q psy467 335 -------ECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 335 -------~~Lasgs~DG-I~IWDl~tgk 354 (845)
++|++++.|+ |++|++.+|+
T Consensus 370 ~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 370 GMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp STTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccceEEEecCCCcEEEEEcCCCC
Confidence 7999999999 9999998864
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-30 Score=312.50 Aligned_cols=251 Identities=27% Similarity=0.445 Sum_probs=213.9
Q ss_pred cceeeee-----------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCC
Q psy467 2 RAKVEKA-----------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~l-----------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg 70 (845)
++++|++ +.+.+|...|.+++|+| ++++|++|+.||+|+|||+.++..+..+.+|...|.+++|+|++
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~ 484 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN 484 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred cEEEEEccCCCcccccccceecCCCCcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCC
Confidence 4678864 46889999999999999 99999999999999999999999999999999999999999999
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEE---cCCCCCeEEEEEccCC--CEEEEEECCCeEEEEECCCCceEEEEcCCCCCe
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTL---NGHKSSITSVDFHPYG--DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l---~~h~~~V~~lafspdg--~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V 145 (845)
++|++|+.|++|++||.......... .+|...|.+++|+|++ ..|++++.|+.|++||++++++...+.+|...|
T Consensus 485 ~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v 564 (694)
T 3dm0_A 485 RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYV 564 (694)
T ss_dssp SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 99999999999999998755433332 3688899999999987 689999999999999999999999999999999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
.+++|+|++++|++++.||.|++ ||+.+++. +..+..+ ..
T Consensus 565 ~~v~~spdg~~l~sg~~Dg~i~i-------------wd~~~~~~--------------------~~~~~~~-~~------ 604 (694)
T 3dm0_A 565 STVAVSPDGSLCASGGKDGVVLL-------------WDLAEGKK--------------------LYSLEAN-SV------ 604 (694)
T ss_dssp EEEEECTTSSEEEEEETTSBCEE-------------EETTTTEE--------------------EECCBCS-SC------
T ss_pred EEEEEeCCCCEEEEEeCCCeEEE-------------EECCCCce--------------------EEEecCC-Cc------
Confidence 99999999999999999999999 99998776 3322211 11
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
+ .+++|+|++. ++++++ ++.|+
T Consensus 605 -v---------------------------~~~~~sp~~~-----------------------------~l~~~~-~~~i~ 626 (694)
T 3dm0_A 605 -I---------------------------HALCFSPNRY-----------------------------WLCAAT-EHGIK 626 (694)
T ss_dssp -E---------------------------EEEEECSSSS-----------------------------EEEEEE-TTEEE
T ss_pred -E---------------------------EEEEEcCCCc-----------------------------EEEEEc-CCCEE
Confidence 2 4455555544 666655 66799
Q ss_pred EEECCCCeEEEEecCCC-------------------CCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 306 FWDLEKFSLVSTTEKNS-------------------STIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~-------------------~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
+||+.+++.+..+..+. ..+++++|||+|++|++|+.|| |+||++.
T Consensus 627 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 627 IWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 99999999888775321 2378999999999999999999 9999975
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-30 Score=276.79 Aligned_cols=254 Identities=19% Similarity=0.320 Sum_probs=223.2
Q ss_pred ceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 3 AKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 3 irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
+++|+ ++.+.+|.+.|.+++|+| ++++|++++.||.|++||+.+++.+..+. |...|.+++|+|++++|+++
T Consensus 56 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 133 (369)
T 3zwl_B 56 ASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAI 133 (369)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEe
Confidence 56776 467899999999999999 99999999999999999999999999888 88999999999999999999
Q ss_pred ECC-----CcEEEEECCCCc-----------EEEEEcCCCC--CeEEEEEccCCCEEEEEECCCeEEEEECCC-CceEEE
Q psy467 77 CQS-----GSIKIWNLAVPT-----------VQRTLNGHKS--SITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KGCIYT 137 (845)
Q Consensus 77 s~D-----GtV~VWDl~tg~-----------~v~~l~~h~~--~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~~l~~ 137 (845)
+.+ |.|.+||+..+. ....+..|.. .+.+++|+|++++|++++.||.|++||+++ +..+..
T Consensus 134 ~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 213 (369)
T 3zwl_B 134 LDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDS 213 (369)
T ss_dssp ECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEE
T ss_pred cCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEE
Confidence 998 999999997653 3344445665 899999999999999999999999999998 788889
Q ss_pred EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC
Q psy467 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 138 ~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~ 217 (845)
+..|...|.+++|+|++++|++++.||.|++ ||+.+++. +..+. +.
T Consensus 214 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v-------------~d~~~~~~--------------------~~~~~-~~ 259 (369)
T 3zwl_B 214 IDLHEKSISDMQFSPDLTYFITSSRDTNSFL-------------VDVSTLQV--------------------LKKYE-TD 259 (369)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEE-------------EETTTCCE--------------------EEEEE-CS
T ss_pred EecCCCceeEEEECCCCCEEEEecCCceEEE-------------EECCCCce--------------------eeeec-CC
Confidence 9999999999999999999999999999999 99988776 44443 22
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS 297 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat 297 (845)
.. + ..+.|+|++. ++++
T Consensus 260 ~~-------~---------------------------~~~~~~~~~~-----------------------------~l~~ 276 (369)
T 3zwl_B 260 CP-------L---------------------------NTAVITPLKE-----------------------------FIIL 276 (369)
T ss_dssp SC-------E---------------------------EEEEECSSSS-----------------------------EEEE
T ss_pred CC-------c---------------------------eeEEecCCCc-----------------------------eEEE
Confidence 22 2 4555555555 8888
Q ss_pred EeCCC--------------eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce
Q psy467 298 SSADR--------------TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ 355 (845)
Q Consensus 298 gs~DG--------------~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~ 355 (845)
++.++ .+++||..+++++..+.+|...|++++|+|+|++|++++.|| |+||+++++..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 277 GGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred eecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 88887 899999999999999999999999999999999999999999 99999987643
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.9e-30 Score=283.02 Aligned_cols=300 Identities=15% Similarity=0.200 Sum_probs=239.2
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-------------CCCCCeEEEEEcC-CCCEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-------------GHSTPVESVQFGN-GEETLS 74 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-------------~h~~~V~sLafSp-dg~~La 74 (845)
..+.+|.+.|++++|+|.++++||+|+.||.|++||+.+++....+. +|...|.+++|+| ++.+|+
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 46788999999999998778999999999999999998876544332 5999999999999 788999
Q ss_pred EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCC---CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEe
Q psy467 75 AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG---DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 75 Sgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg---~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafS 151 (845)
+++.||.|++||+.+++....+. +...+.++.|++.+ .++++++.||.|++||+++++.+..+..|...|.+++|+
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWS 195 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEEC
T ss_pred EEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEEC
Confidence 99999999999999999888887 77889999999854 599999999999999999999999999999999999999
Q ss_pred cCCC-EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 152 PDGQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 152 Pdg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
|+++ ++++++.||.|++ ||++++... +..+..+... .
T Consensus 196 ~~~~~ll~~~~~dg~i~i-------------~d~~~~~~~-------------------~~~~~~~~~~-------~--- 233 (408)
T 4a11_B 196 PRYDYILATASADSRVKL-------------WDVRRASGC-------------------LITLDQHNGK-------K--- 233 (408)
T ss_dssp SSCTTEEEEEETTSCEEE-------------EETTCSSCC-------------------SEECCTTTTC-------S---
T ss_pred CCCCcEEEEEcCCCcEEE-------------EECCCCCcc-------------------cccccccccc-------c---
Confidence 9998 5899999999999 999876631 2222221111 0
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
..........+...|.+++|+|+++ +|++++.||.|++||+.
T Consensus 234 ---------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 234 ---------------------------------SQAVESANTAHNGKVNGLCFTSDGL-----HLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp ---------------------------------CCCTTTSSCSCSSCEEEEEECTTSS-----EEEEEETTSCEEEEETT
T ss_pred ---------------------------------ceeeccccccccCceeEEEEcCCCC-----EEEEecCCCeEEEEECC
Confidence 0000011123345677888888887 99999999999999999
Q ss_pred CCeEEEEecCC-----CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE---
Q psy467 311 KFSLVSTTEKN-----SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR--- 380 (845)
Q Consensus 311 s~~~l~tl~gh-----~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS--- 380 (845)
+++....+..+ ...+........+..+++++.++ |++||+.+++.+..+.+|.+.|++++|+ ++++|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 276 NGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp TCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred CCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC
Confidence 98765544432 11222222233445566667777 9999999999999999999999999999 88888877
Q ss_pred --EEEEeeCCC
Q psy467 381 --VGTWSHQDS 389 (845)
Q Consensus 381 --VsiW~~d~~ 389 (845)
|.+|..+..
T Consensus 356 g~i~iw~~~~~ 366 (408)
T 4a11_B 356 CNILAWVPSLY 366 (408)
T ss_dssp SCEEEEEECC-
T ss_pred CeEEEEeCCCC
Confidence 999987643
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-30 Score=283.64 Aligned_cols=254 Identities=16% Similarity=0.267 Sum_probs=209.3
Q ss_pred CCCcEEEEEEecCC----CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECC
Q psy467 14 HGASVNCLALGKKS----GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 14 H~~~V~~LafSp~d----g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~ 88 (845)
|...|.+++|+| + +.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+.
T Consensus 68 ~~~~v~~~~~~~-~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 68 ADENFYTCAWTY-DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp TTCCEEEEEEEE-CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCcEEEEEecc-CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 668899999999 6 67999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCcEEEEE---cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc--------------------------
Q psy467 89 VPTVQRTL---NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-------------------------- 139 (845)
Q Consensus 89 tg~~v~~l---~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-------------------------- 139 (845)
+++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 99999888 6899999999999999999999999999999998765543333
Q ss_pred --CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC
Q psy467 140 --GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 140 --~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~ 217 (845)
.|...|.+++|+ ++++++++.|+.|++ ||+.++.......... ......+..+..|
T Consensus 227 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~-------------wd~~~~~~~~~~~~~~------~~~~~~~~~~~~~- 284 (366)
T 3k26_A 227 RDIHRNYVDCVRWL--GDLILSKSCENAIVC-------------WKPGKMEDDIDKIKPS------ESNVTILGRFDYS- 284 (366)
T ss_dssp CSSCSSCCCEEEEE--TTEEEEECSSSEEEE-------------EEESSTTCCGGGCCTT------CCCEEEEEEEECS-
T ss_pred ccCCcceEEEEEEc--CCEEEEEecCCEEEE-------------EeCCCccccccccccC------Ccchheecccccc-
Confidence 388999999999 789999999999999 9988765410000000 0000011112222
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC--CCcccceEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ--SPMLCFILT 295 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd--g~~~~~~lL 295 (845)
...+++++|+|+ ++ +|
T Consensus 285 ---------------------------------------------------------~~~v~~~~~s~~~~~~-----~l 302 (366)
T 3k26_A 285 ---------------------------------------------------------QCDIWYMRFSMDFWQK-----ML 302 (366)
T ss_dssp ---------------------------------------------------------SCCSSCCCCEECTTSS-----EE
T ss_pred ---------------------------------------------------------CCcEEEEEEcCCCCCc-----EE
Confidence 134556666666 66 99
Q ss_pred EEEeCCCeEEEEECCCCe----EEEEecCC--CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 296 TSSSADRTVNFWDLEKFS----LVSTTEKN--SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~----~l~tl~gh--~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
++|+.||.|++||+.+++ ....+.+| ...|++++|+|+|++|++++.|| |++||+.+
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 999999999999999874 55577777 78999999999999999999999 99999853
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-30 Score=287.56 Aligned_cols=266 Identities=18% Similarity=0.233 Sum_probs=220.4
Q ss_pred cceeeeeE------Ee--ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCC---CCCeEEEEEcCCC
Q psy467 2 RAKVEKAE------DF--MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGH---STPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~l~------~L--~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h---~~~V~sLafSpdg 70 (845)
.+++|++. .+ .+|.+.|.+++|+|+++++|++++.|+.|++||+.+ ..+..+..| ...|.+++|+|++
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~ 175 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSR 175 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTT
T ss_pred eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCC
Confidence 36777742 33 379999999999996679999999999999999986 555555444 4889999999999
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCC----CceEEEEcCCCCCe
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRR----KGCIYTYRGHSKSI 145 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t----~~~l~~~~~h~~~V 145 (845)
++|++|+.|+.|++||+ +++.+..+..|...|.+++|+|+++ +|++++.|+.|++||+++ +.++..+ .|...|
T Consensus 176 ~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v 253 (383)
T 3ei3_B 176 QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPV 253 (383)
T ss_dssp TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCE
T ss_pred CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCce
Confidence 99999999999999999 5788889999999999999999998 999999999999999987 6667666 589999
Q ss_pred EEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 146 NSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
.+++|+| ++++|++++.|+.|++ ||+++++. +..+.+|...
T Consensus 254 ~~~~~s~~~~~~l~~~~~d~~i~i-------------wd~~~~~~--------------------~~~~~~~~~~----- 295 (383)
T 3ei3_B 254 NAAYFNPTDSTKLLTTDQRNEIRV-------------YSSYDWSK--------------------PDQIIIHPHR----- 295 (383)
T ss_dssp EEEEECTTTSCEEEEEESSSEEEE-------------EETTBTTS--------------------CSEEEECCBC-----
T ss_pred EEEEEcCCCCCEEEEEcCCCcEEE-------------EECCCCcc--------------------cccccccccc-----
Confidence 9999999 9999999999999999 99998877 3333333222
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
.. .........|+|++. +..++|+|+++ + +|+.|+.|
T Consensus 296 --~~---------------------~~~~~~~~~~~p~~~-------------~~~~~~s~dg~-----~--s~s~d~~i 332 (383)
T 3ei3_B 296 --QF---------------------QHLTPIKATWHPMYD-------------LIVAGRYPDDQ-----L--LLNDKRTI 332 (383)
T ss_dssp --CC---------------------TTSCCCCCEECSSSS-------------EEEEECBCCTT-----T--CTTCCCCE
T ss_pred --cc---------------------ccccceEEeccCCCC-------------ceEEEecCCcc-----c--ccCCCCeE
Confidence 00 000002346777655 56788889987 5 88899999
Q ss_pred EEEECCCCeEEEEecC--CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 305 NFWDLEKFSLVSTTEK--NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~g--h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
++||+.+++++..+.+ |...+.+++|+|+|++|++|+ |+ |+|||+++
T Consensus 333 ~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 333 DIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 9999999999999987 457788889999999999997 78 99999864
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-29 Score=269.84 Aligned_cols=277 Identities=21% Similarity=0.301 Sum_probs=219.7
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec--CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS--GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
.++|+||+ ++ +||+|. |++|+|||+.+++.+..+. +|...|.+++|+|++++|++|+.||+|++||+++++.+..
T Consensus 28 ~~~l~WS~-~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 28 LNLVDWSS-GN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp CBCEEECT-TS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEECC-CC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 57899998 54 777765 8999999999999887764 6788899999999999999999999999999999999999
Q ss_pred EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeecc
Q psy467 96 LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 96 l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~ 174 (845)
+.+|...+.++.+ ++..+++++.++.+++|+.... ..+..+.+|...+.++.++++++++++++.||.|++
T Consensus 105 ~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i------ 176 (318)
T 4ggc_A 105 MTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV------ 176 (318)
T ss_dssp EECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE------
T ss_pred ecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeE------
Confidence 9999988876555 5679999999999999999765 456778889999999999999999999999999999
Q ss_pred CCceeEEEECCCCccCCCC------CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 175 TNTSIHVVDLSLVHPLGTP------PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 175 ~~~~I~vWDl~tg~~l~~~------~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||+++++..... ....+..+.+.+++..+......... ..+.+|+....
T Consensus 177 -------wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~i~lwd~~~~--------------- 231 (318)
T 4ggc_A 177 -------WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD---RHIRIWNVCSG--------------- 231 (318)
T ss_dssp -------EESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT---CEEEEEETTTC---------------
T ss_pred -------EECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC---CEEEEEecccc---------------
Confidence 999887653322 13455667777766544433222211 12223221110
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE--eCCCeEEEEECCCCeEEEEecCCCCCEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS--SADRTVNFWDLEKFSLVSTTEKNSSTIR 326 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg--s~DG~I~IWDl~s~~~l~tl~gh~~~Vt 326 (845)
. ..........+..++|+|++. .++++ +.|+.|++||+.+++++.++.+|.+.|+
T Consensus 232 ------~------------~~~~~~~~~~v~~~~~~~~~~-----~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~ 288 (318)
T 4ggc_A 232 ------A------------CLSAVDAHSQVCSILWSPHYK-----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVL 288 (318)
T ss_dssp ------C------------EEEEEECSSCEEEEEEETTTT-----EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEE
T ss_pred ------c------------ccccccceeeeeeeeeccccc-----ceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence 0 001112234577888888887 55544 4799999999999999999999999999
Q ss_pred EEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 327 RLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 327 slafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+++|+|+|++||+|+.|+ |+|||+...
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999999999999999 999998653
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-29 Score=286.37 Aligned_cols=262 Identities=19% Similarity=0.306 Sum_probs=210.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEE
Q psy467 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIY 136 (845)
Q Consensus 57 h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~ 136 (845)
....+.++.++ +++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ ++++++|+.||.|++||+.+++.+.
T Consensus 118 ~~~v~~~~~~~--g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~ 193 (445)
T 2ovr_B 118 DDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIH 193 (445)
T ss_dssp TTSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCcEEEEEEc--CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEE
Confidence 34557788888 6799999999999999999999999999999999999998 6799999999999999999999999
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC--CCCCcceeecCCCCeEEEEe
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP--PQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~--~~~i~svs~spdg~~l~~~~ 214 (845)
.+.+|...|.+++|+ ++.+++++.||.|++ ||+.+++.+.... ...+.++.+ ++..+....
T Consensus 194 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~-------------wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 194 TLYGHTSTVRCMHLH--EKRVVSGSRDATLRV-------------WDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEE-------------EESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred EECCCCCcEEEEEec--CCEEEEEeCCCEEEE-------------EECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence 999999999999997 678999999999999 9999998854432 344555555 444444322
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
. ++.+.+|++.... ....+ ..+...+.+++| ++. +
T Consensus 257 ~------dg~i~iwd~~~~~--------------------~~~~~------------~~~~~~v~~~~~--~~~-----~ 291 (445)
T 2ovr_B 257 Y------DFMVKVWDPETET--------------------CLHTL------------QGHTNRVYSLQF--DGI-----H 291 (445)
T ss_dssp T------TSCEEEEEGGGTE--------------------EEEEE------------CCCSSCEEEEEE--CSS-----E
T ss_pred C------CCEEEEEECCCCc--------------------EeEEe------------cCCCCceEEEEE--CCC-----E
Confidence 1 1122333322110 00011 122356778888 566 8
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC---CCCCeEEEE
Q psy467 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM---GWGKVQDLA 370 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~---h~~~VtsVa 370 (845)
+++|+.||.|++||+.+++++..+.+|...+.++.++ +.+|++|+.|+ |++||+.+++.+..+.. |...|++++
T Consensus 292 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 369 (445)
T 2ovr_B 292 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ 369 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEE
Confidence 9999999999999999999999999999999988875 66999999999 99999999999999886 888999999
Q ss_pred EcCCceEEEE-----EEEEeeC
Q psy467 371 VTGTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 371 fSdg~lLaaS-----VsiW~~d 387 (845)
|++ ++++++ |.+|...
T Consensus 370 ~~~-~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 370 FNK-NFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp ECS-SEEEEEETTSEEEEEETT
T ss_pred ECC-CEEEEEeCCCeEEEEECC
Confidence 974 555555 9999765
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.98 E-value=4.2e-30 Score=300.18 Aligned_cols=275 Identities=16% Similarity=0.240 Sum_probs=244.0
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCC-eEEEEEcC--CCCEEEEEECCCcEEE
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTP-VESVQFGN--GEETLSAGCQSGSIKI 84 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~-V~sLafSp--dg~~LaSgs~DGtV~V 84 (845)
..|.+.|.+++|+| ++++||+++ ++.|++|++.++ +....+.+|... |.+++|+| ++++|++|+.||.|++
T Consensus 15 ~~~~~~v~~~~~sp-dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 15 STQRNFTTHLSYDP-TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CCCTTCCCCCEEET-TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred CCccCceeEEEECC-CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 46899999999999 999999998 789999999998 899999999999 99999999 9999999999999999
Q ss_pred EECCCC--------cEEEEEcCCCCCeEEEEEccCCCEEEEEECC----CeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 85 WNLAVP--------TVQRTLNGHKSSITSVDFHPYGDYLCSGSLD----SFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 85 WDl~tg--------~~v~~l~~h~~~V~~lafspdg~~Lasgs~D----G~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
||+.++ +....+..|...|.+++|+|++++|++++.+ +.|++|| .++.+..+..|...|.+++|+|
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECS
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECC
Confidence 999754 6777888899999999999999999999987 6888888 5678889999999999999999
Q ss_pred CCC-EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCC---CCccceeeEe
Q psy467 153 DGQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRP---GGTKAKIDVT 228 (845)
Q Consensus 153 dg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~---~~~~~~i~V~ 228 (845)
+++ .+++++.|+.|++ ||+.+++. +..+.+|.. . +
T Consensus 171 ~~~~~l~~~~~d~~v~v-------------wd~~~~~~--------------------~~~~~~~~~~~~~-------v- 209 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVF-------------YQGPPFKF--------------------SASDRTHHKQGSF-------V- 209 (615)
T ss_dssp SSSCEEEEEETTTEEEE-------------EETTTBEE--------------------EEEECSSSCTTCC-------E-
T ss_pred CCCcEEEEEeCCCcEEE-------------EeCCCcce--------------------eeeecccCCCCce-------E-
Confidence 998 8999999999999 99887776 556655554 3 4
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCC-CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEE
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPH-RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspd-g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IW 307 (845)
.+++|+|+ +. +|++++.||.|++|
T Consensus 210 --------------------------~~~~~~~~~~~-----------------------------~l~~~~~dg~i~vw 234 (615)
T 1pgu_A 210 --------------------------RDVEFSPDSGE-----------------------------FVITVGSDRKISCF 234 (615)
T ss_dssp --------------------------EEEEECSTTCC-----------------------------EEEEEETTCCEEEE
T ss_pred --------------------------EEEEECCCCCC-----------------------------EEEEEeCCCeEEEE
Confidence 55555555 55 99999999999999
Q ss_pred ECCCCeEEEEe-c---CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCC----CCCeEEEEEcCCceEE
Q psy467 308 DLEKFSLVSTT-E---KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMG----WGKVQDLAVTGTQLWF 378 (845)
Q Consensus 308 Dl~s~~~l~tl-~---gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h----~~~VtsVafSdg~lLa 378 (845)
|+.+++.+..+ . .|...|.+++|+ ++++|++++.|+ |++||+.+++.+..+..+ ...+.++.|+++.+++
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 313 (615)
T 1pgu_A 235 DGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 313 (615)
T ss_dssp ETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEE
T ss_pred ECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEE
Confidence 99999999999 6 899999999999 999999999999 999999999999888877 3678899998666666
Q ss_pred EE-----EEEEeeC
Q psy467 379 RR-----VGTWSHQ 387 (845)
Q Consensus 379 aS-----VsiW~~d 387 (845)
++ +.+|...
T Consensus 314 ~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 314 SLSLDGTLNFYELG 327 (615)
T ss_dssp EEETTSCEEEEETT
T ss_pred EEECCCCEEEEECC
Confidence 66 8999765
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.8e-30 Score=288.20 Aligned_cols=257 Identities=20% Similarity=0.331 Sum_probs=215.1
Q ss_pred ceeeee------EEecc-CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 3 AKVEKA------EDFMA-HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 3 irlw~l------~~L~g-H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
+++|++ +.+.. |.+.|.+++|+| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ +++|++
T Consensus 115 v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 191 (401)
T 4aez_A 115 VYVWNADSGSVSALAETDESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSS 191 (401)
T ss_dssp EEEEETTTCCEEEEEECCTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEE
T ss_pred EEEeeCCCCcEeEeeecCCCCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEE
Confidence 567763 23443 899999999999 99999999999999999999999999999999999999994 679999
Q ss_pred EECCCcEEEEECC-CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC
Q psy467 76 GCQSGSIKIWNLA-VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 76 gs~DGtV~VWDl~-tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg 154 (845)
|+.||.|++||+. .+..+..+.+|...|.+++|+|++++|++|+.||.|++||++++..+..+..|...|.+++|+|++
T Consensus 192 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~ 271 (401)
T 4aez_A 192 GSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQ 271 (401)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTS
T ss_pred EcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCC
Confidence 9999999999999 567788888999999999999999999999999999999999999999999999999999999976
Q ss_pred C-EEEEEe--CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 155 Q-WIASGG--EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 155 ~-~Lasgs--~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
. ++++++ .|+.|++ ||+.+++. +..+..+ .. +
T Consensus 272 ~~ll~~~~gs~d~~i~i-------------~d~~~~~~--------------------~~~~~~~-~~-------v---- 306 (401)
T 4aez_A 272 SNLLATGGGTMDKQIHF-------------WNAATGAR--------------------VNTVDAG-SQ-------V---- 306 (401)
T ss_dssp TTEEEEECCTTTCEEEE-------------EETTTCCE--------------------EEEEECS-SC-------E----
T ss_pred CCEEEEecCCCCCEEEE-------------EECCCCCE--------------------EEEEeCC-Cc-------E----
Confidence 4 566654 7999999 99998776 4444321 12 3
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE--EeCCCeEEEEEC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS--SSADRTVNFWDL 309 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat--gs~DG~I~IWDl 309 (845)
..++|+|++. ++++ |+.||.|++||+
T Consensus 307 -----------------------~~~~~s~~~~-----------------------------~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 307 -----------------------TSLIWSPHSK-----------------------------EIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp -----------------------EEEEECSSSS-----------------------------EEEEEECTTTCEEEEEEE
T ss_pred -----------------------EEEEECCCCC-----------------------------eEEEEeecCCCcEEEEec
Confidence 4555555555 7777 448999999999
Q ss_pred CCCeEEE--EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 310 EKFSLVS--TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 310 ~s~~~l~--tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
.++.... .+.+|...|.+++|+|+|++|++++.|| |++|++.+++.+...
T Consensus 335 ~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 335 SSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp ETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred CCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 9865544 4678999999999999999999999999 999999998877554
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-29 Score=286.27 Aligned_cols=265 Identities=21% Similarity=0.340 Sum_probs=218.5
Q ss_pred cceeeee--------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEE
Q psy467 2 RAKVEKA--------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73 (845)
Q Consensus 2 ~irlw~l--------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~L 73 (845)
++++|++ ..+.+|...|+||+|+| +|++||+|+.||.|+|||+.+++.+..+.+|...|.+++|+ +..|
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l 202 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYIL 202 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEE
Confidence 4678873 24557888999999999 99999999999999999999999999999999999998885 6799
Q ss_pred EEEECCCcEEEEECCCC-cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc----eEEEEcCCCCCeEEE
Q psy467 74 SAGCQSGSIKIWNLAVP-TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG----CIYTYRGHSKSINSI 148 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg-~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~----~l~~~~~h~~~V~sL 148 (845)
++|+.|+.+++||.... ..+..+.+|...+..+.|+|+++++++++.|+.|++|+..+++ .+.....|...|.++
T Consensus 203 ~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~ 282 (420)
T 4gga_A 203 SSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAV 282 (420)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEE
T ss_pred EEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeee
Confidence 99999999999999864 5667888999999999999999999999999999999998764 456677899999999
Q ss_pred EEecCC-CEEEEE--eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 149 RFSPDG-QWIASG--GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 149 afSPdg-~~Lasg--s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+|+|++ ..++++ +.|+.|++ ||+.++.. +..+..+..
T Consensus 283 ~~~p~~~~~la~~~gs~D~~I~i-------------wd~~t~~~--------------------~~~~~~~~~------- 322 (420)
T 4gga_A 283 AWCPWQSNVLATGGGTSDRHIRI-------------WNVCSGAC--------------------LSAVDAHSQ------- 322 (420)
T ss_dssp EECTTCTTEEEEEECTTTCEEEE-------------EETTTTEE--------------------EEEEECSSC-------
T ss_pred eeCCCcccEEEEEeecCCCEEEE-------------EeCCcccc--------------------ceeeccccc-------
Confidence 999965 455554 47999999 99998887 555444332
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe--CCCe
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS--ADRT 303 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs--~DG~ 303 (845)
+ ..+.|++++. .+++++ .|+.
T Consensus 323 -v---------------------------~~~~~~~~~~-----------------------------~lv~~sg~~d~~ 345 (420)
T 4gga_A 323 -V---------------------------CSILWSPHYK-----------------------------ELISGHGFAQNQ 345 (420)
T ss_dssp -E---------------------------EEEEEETTTT-----------------------------EEEEEECTTTCC
T ss_pred -e---------------------------eeeeecCCCC-----------------------------eEEEEEecCCCE
Confidence 2 5566666655 565544 7999
Q ss_pred EEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCe
Q psy467 304 VNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKV 366 (845)
Q Consensus 304 I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~V 366 (845)
|+|||+.+++++.++.+|.+.|++++|+|||++|++|+.|+ |+|||+...........+...+
T Consensus 346 I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~ 409 (420)
T 4gga_A 346 LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASA 409 (420)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----------
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCc
Confidence 99999999999999999999999999999999999999999 9999998766555554444433
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=273.09 Aligned_cols=255 Identities=18% Similarity=0.237 Sum_probs=206.2
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC--CcEEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEEEE
Q psy467 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV--PTVQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIKLW 127 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t--g~~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IW 127 (845)
..+.+|...|.+++|+|+|++||+|+.|++|+|||+.+ .+.+..+.+|.+.|.+++|++ ++++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45778999999999999999999999999999999974 367788999999999999986 38999999999999999
Q ss_pred ECCCCc--eEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceee
Q psy467 128 DLRRKG--CIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 128 Dl~t~~--~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~ 203 (845)
|+++++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++ ||++++....
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~-------------wd~~~~~~~~------------ 137 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV-------------VEFKENGTTS------------ 137 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE-------------EEBCSSSCBC------------
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEE-------------EEecCCCcee------------
Confidence 998774 56777889999999999997 899999999999999 9998654200
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
...+.+|... + .+++|+|++.... .....
T Consensus 138 ------~~~~~~h~~~-------v---------------------------~~~~~~p~~~~~~-----------~~~~~ 166 (297)
T 2pm7_B 138 ------PIIIDAHAIG-------V---------------------------NSASWAPATIEED-----------GEHNG 166 (297)
T ss_dssp ------CEEEECCSSC-------E---------------------------EEEEECCCC--------------------
T ss_pred ------eeeeecccCc-------c---------------------------ceEeecCCccccc-----------ccCCC
Confidence 2334556655 5 6777777643100 00001
Q ss_pred cCCCCcccceEEEEEeCCCeEEEEECCCCe----EEEEecCCCCCEEEEEEeCCC---CEEEEEeCCC-EEEEEecCCc-
Q psy467 284 LPQSPMLCFILTTSSSADRTVNFWDLEKFS----LVSTTEKNSSTIRRLTFSEGG---ECLLGGDTEG-LKVYGWEPAR- 354 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~DG~I~IWDl~s~~----~l~tl~gh~~~VtslafSpdG---~~Lasgs~DG-I~IWDl~tgk- 354 (845)
.++++ +|++|+.|+.|++||+++++ +..++.+|...|.+++|+|++ .+||+++.|+ |+|||++++.
T Consensus 167 ~~~~~-----~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 167 TKESR-----KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp ---CC-----EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred CCCcc-----eEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 12344 89999999999999998765 677889999999999999985 8999999999 9999998753
Q ss_pred --eEEEe--cCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 355 --QYDAQ--PMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 355 --~l~tl--~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
....+ ..|...|.+++|+ ++++|+++ |.+|...
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 12233 4678899999999 89888877 9999765
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=306.55 Aligned_cols=288 Identities=16% Similarity=0.264 Sum_probs=249.1
Q ss_pred ceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 3 AKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 3 irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
+++|+ ++.+.+|.+.|++++|+| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++.+|+++
T Consensus 37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 115 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSG 115 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred EEEEECCCCceEEEEecCCCcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEE
Confidence 56777 367889999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ECCCcEEEEECCCC-cEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcCCC-CCeEEEEEec-
Q psy467 77 CQSGSIKIWNLAVP-TVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-KSINSIRFSP- 152 (845)
Q Consensus 77 s~DGtV~VWDl~tg-~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~-~~V~sLafSP- 152 (845)
+.||.|++||+.++ .....+.+|...|.+++|+| +++.|++++.||.|++||+.++.....+..+. ..+.+++|+|
T Consensus 116 ~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 195 (814)
T 3mkq_A 116 SDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL 195 (814)
T ss_dssp ETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCS
T ss_pred cCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEEC
Confidence 99999999999987 67788888999999999999 88999999999999999999888877776554 8899999999
Q ss_pred -CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 153 -DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 153 -dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++.++++++.||.|++ ||+.+++. +..+.+|... +
T Consensus 196 ~~~~~l~~~~~dg~i~~-------------~d~~~~~~--------------------~~~~~~~~~~-------v---- 231 (814)
T 3mkq_A 196 PDKPYMITASDDLTIKI-------------WDYQTKSC--------------------VATLEGHMSN-------V---- 231 (814)
T ss_dssp TTCCEEEEECTTSEEEE-------------EETTTTEE--------------------EEEEECCSSC-------E----
T ss_pred CCCCEEEEEeCCCEEEE-------------EECCCCcE--------------------EEEEcCCCCC-------E----
Confidence 9999999999999999 99988776 6666666555 5
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
.+++|+|++. ++++++.||.|++||+.+
T Consensus 232 -----------------------~~~~~~~~~~-----------------------------~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 232 -----------------------SFAVFHPTLP-----------------------------IIISGSEDGTLKIWNSST 259 (814)
T ss_dssp -----------------------EEEEECSSSS-----------------------------EEEEEETTSCEEEEETTT
T ss_pred -----------------------EEEEEcCCCC-----------------------------EEEEEeCCCeEEEEECCC
Confidence 5666666666 999999999999999999
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCC--EEEEEeCCCEEEEEecCCce----------EE----------------------
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGE--CLLGGDTEGLKVYGWEPARQ----------YD---------------------- 357 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~--~Lasgs~DGI~IWDl~tgk~----------l~---------------------- 357 (845)
++.+..+..|...+.+++|+|+|. ++++++.+++.+|++..+.. +.
T Consensus 260 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (814)
T 3mkq_A 260 YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEV 339 (814)
T ss_dssp CSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCC
T ss_pred CcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeeccccccc
Confidence 999999999999999999999987 57777766688888764321 11
Q ss_pred -----------EecCCCCCeEEEEEc-CCceEEEE----EEEEeeC
Q psy467 358 -----------AQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQ 387 (845)
Q Consensus 358 -----------tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d 387 (845)
.+..+...+++++|+ +|++++++ +.+|...
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~ 385 (814)
T 3mkq_A 340 EQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTAL 385 (814)
T ss_dssp CSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETT
T ss_pred ccCccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECc
Confidence 112344568899999 99988887 7788743
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=311.19 Aligned_cols=289 Identities=11% Similarity=0.070 Sum_probs=221.6
Q ss_pred cceeeee----------EEeccCCCcEEEEEEecC-----CCCEEEEEeCCCeEEEEECCCCee-----------EEEec
Q psy467 2 RAKVEKA----------EDFMAHGASVNCLALGKK-----SGQVLATGGDDKKVNLWALGKSNC-----------IMSLS 55 (845)
Q Consensus 2 ~irlw~l----------~~L~gH~~~V~~LafSp~-----dg~~LaTgs~DG~I~IWdl~t~~~-----------i~~l~ 55 (845)
++++|++ ..+.+|.+.|.+++|+|+ ++.+||+++.||+|+|||+.++.. ...+.
T Consensus 184 tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~ 263 (524)
T 2j04_B 184 CIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS 263 (524)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC
T ss_pred eEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE
Confidence 3678875 236678899999999993 267999999999999999976532 34678
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-cEEEEEcCCCCCeEEE--EEccCC-CEEEEEECCCeEEEEECCC
Q psy467 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-TVQRTLNGHKSSITSV--DFHPYG-DYLCSGSLDSFIKLWDLRR 131 (845)
Q Consensus 56 ~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg-~~v~~l~~h~~~V~~l--afspdg-~~Lasgs~DG~I~IWDl~t 131 (845)
+|...|++++|+++ ..|++|+.||+|++||++++ .+...+.+|...|.++ +|++++ .+|++|+.|++|++||+++
T Consensus 264 ~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 264 LADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp CTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred cCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 89999999999986 48999999999999999976 3456688899999999 578887 8999999999999999998
Q ss_pred CceEEEEcCCCC--CeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe
Q psy467 132 KGCIYTYRGHSK--SINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 132 ~~~l~~~~~h~~--~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
++++..+.+|.. .|.+++|+|+++.+++++.|++|++ ||++++.+
T Consensus 343 ~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l-------------wd~~~~~~-------------------- 389 (524)
T 2j04_B 343 IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRA-------------VPSRAAFA-------------------- 389 (524)
T ss_dssp HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEE-------------EETTCTTC--------------------
T ss_pred CCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEE-------------EECccccc--------------------
Confidence 887766666543 5889999999999999999999999 99998776
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCc
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~ 289 (845)
+..+.+|... | .+++|+|++.
T Consensus 390 ~~~l~gH~~~-------V---------------------------~sva~Sp~g~------------------------- 410 (524)
T 2j04_B 390 VHPLVSRETT-------I---------------------------TAIGVSRLHP------------------------- 410 (524)
T ss_dssp CEEEEECSSC-------E---------------------------EEEECCSSCC-------------------------
T ss_pred ceeeecCCCc-------e---------------------------EEEEeCCCCC-------------------------
Confidence 5666677666 6 6666666666
Q ss_pred ccceEEEEEeCCCeEEEEECCCCeEEEEecC-----CCCCEEEEEEeCCCCEEEEEeCCCEEEEEec-CCceEEEecCCC
Q psy467 290 LCFILTTSSSADRTVNFWDLEKFSLVSTTEK-----NSSTIRRLTFSEGGECLLGGDTEGLKVYGWE-PARQYDAQPMGW 363 (845)
Q Consensus 290 ~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g-----h~~~VtslafSpdG~~Lasgs~DGI~IWDl~-tgk~l~tl~~h~ 363 (845)
+|++|+.||+|++||+..+ .+..... +...|.+++|+|+|..+.. .+++.+|++. ++.++..+.+|.
T Consensus 411 ----~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~--~~~~~~~~~~~~g~~~~~l~gh~ 483 (524)
T 2j04_B 411 ----MVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI--DSSYEVYPLTVNDVSKAKIDAHG 483 (524)
T ss_dssp ----BCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEEE--CCCCCCCC-------------CC
T ss_pred ----eEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEEc--cCCceecccccCCcceeeecCCC
Confidence 8999999999999998654 2111111 1124789999999996532 3344556554 567888899999
Q ss_pred CCeEEEEEc-CC---ceEEEE-----EEEEeeCCCC
Q psy467 364 GKVQDLAVT-GT---QLWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 364 ~~VtsVafS-dg---~lLaaS-----VsiW~~d~~~ 390 (845)
..|++|+|+ ++ .++|++ |.+|.++++.
T Consensus 484 ~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 484 INITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp CSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred ceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 999999999 64 488887 9999988764
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-30 Score=279.13 Aligned_cols=249 Identities=14% Similarity=0.236 Sum_probs=212.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
++.+.+|.+.|.+++|+| ++++|++++.||.|++||+.+++.... +..|...|.+++|+|++++|++++.||.|++|
T Consensus 45 ~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 45 VHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred eeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEE
Confidence 466889999999999999 999999999999999999988875444 46799999999999999999999999999999
Q ss_pred ECCCCcE---EEE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEEC------------------CCCceEEEEcCCCC
Q psy467 86 NLAVPTV---QRT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL------------------RRKGCIYTYRGHSK 143 (845)
Q Consensus 86 Dl~tg~~---v~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl------------------~t~~~l~~~~~h~~ 143 (845)
|+..+.. ... ...|...|.+++|+|++++|++++.||.|++||+ ..++.+..+..|..
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG 203 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC
Confidence 9998762 333 3668899999999999999999999999999995 36788889989999
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccc
Q psy467 144 SINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKA 223 (845)
Q Consensus 144 ~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~ 223 (845)
.|.+++|+|++++|++++.||.|++ ||+++++. +..+..|...
T Consensus 204 ~v~~~~~~~~~~~l~~~~~d~~i~i-------------~d~~~~~~--------------------~~~~~~~~~~---- 246 (372)
T 1k8k_C 204 WVHGVCFSANGSRVAWVSHDSTVCL-------------ADADKKMA--------------------VATLASETLP---- 246 (372)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEE-------------EEGGGTTE--------------------EEEEECSSCC----
T ss_pred eEEEEEECCCCCEEEEEeCCCEEEE-------------EECCCCce--------------------eEEEccCCCC----
Confidence 9999999999999999999999999 99998777 6666665544
Q ss_pred eeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCe
Q psy467 224 KIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT 303 (845)
Q Consensus 224 ~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~ 303 (845)
+ ..++|+|++. ++++| .|+.
T Consensus 247 ---v---------------------------~~~~~~~~~~-----------------------------~l~~~-~d~~ 266 (372)
T 1k8k_C 247 ---L---------------------------LAVTFITESS-----------------------------LVAAG-HDCF 266 (372)
T ss_dssp ---E---------------------------EEEEEEETTE-----------------------------EEEEE-TTSS
T ss_pred ---e---------------------------EEEEEecCCC-----------------------------EEEEE-eCCe
Confidence 4 5566666655 78777 8999
Q ss_pred EEEEECCC--CeE--E------------------------------------EEe-cCCCCCEEEEEEe-CCC---CEEE
Q psy467 304 VNFWDLEK--FSL--V------------------------------------STT-EKNSSTIRRLTFS-EGG---ECLL 338 (845)
Q Consensus 304 I~IWDl~s--~~~--l------------------------------------~tl-~gh~~~VtslafS-pdG---~~La 338 (845)
|++||+.+ ++. + ..+ .+|...|++++|+ ++| .+|+
T Consensus 267 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~ 346 (372)
T 1k8k_C 267 PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 346 (372)
T ss_dssp CEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEE
T ss_pred EEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEE
Confidence 99999987 421 0 223 3899999999966 677 9999
Q ss_pred EEeCCC-EEEEEecCCc
Q psy467 339 GGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 339 sgs~DG-I~IWDl~tgk 354 (845)
+|+.|| |++|++.+++
T Consensus 347 s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 347 TTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp EEETTSEEEEEEHHHHH
T ss_pred EecCCCceEEEEecChh
Confidence 999999 9999998754
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-30 Score=278.72 Aligned_cols=262 Identities=18% Similarity=0.314 Sum_probs=212.1
Q ss_pred ceeeeeE-------EeccCCCcEEEEEEecCC--CCEEEEEeCCCeEEEEECCCCe-eEEEecCCCCCeEEEEE------
Q psy467 3 AKVEKAE-------DFMAHGASVNCLALGKKS--GQVLATGGDDKKVNLWALGKSN-CIMSLSGHSTPVESVQF------ 66 (845)
Q Consensus 3 irlw~l~-------~L~gH~~~V~~LafSp~d--g~~LaTgs~DG~I~IWdl~t~~-~i~~l~~h~~~V~sLaf------ 66 (845)
+++|++. ...+|.+.|.+++|+|+. +.+|++|+.||.|++||+.+++ .+..+.+|...|.+++|
T Consensus 46 v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 125 (357)
T 3i2n_A 46 IQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGI 125 (357)
T ss_dssp EEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGC
T ss_pred EEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeecccccc
Confidence 6777753 233799999999999932 7999999999999999999888 88999999999999955
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCc-EEEEEcCCCC----CeEEEE----EccCCCEEEEEECCCeEEEEECCCCceEEE
Q psy467 67 GNGEETLSAGCQSGSIKIWNLAVPT-VQRTLNGHKS----SITSVD----FHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137 (845)
Q Consensus 67 Spdg~~LaSgs~DGtV~VWDl~tg~-~v~~l~~h~~----~V~~la----fspdg~~Lasgs~DG~I~IWDl~t~~~l~~ 137 (845)
+|++++|++++.||.|++||+.+++ .+..+..|.+ .+.+++ |+|++++|++++.||.|++||+++++....
T Consensus 126 s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 205 (357)
T 3i2n_A 126 GEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE 205 (357)
T ss_dssp C-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee
Confidence 6799999999999999999999886 6777765554 788998 788999999999999999999999887555
Q ss_pred EcCCCCCeEEEEEec---CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe
Q psy467 138 YRGHSKSINSIRFSP---DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 138 ~~~h~~~V~sLafSP---dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~ 214 (845)
..|...|.+++|+| ++++|++++.||.|++ ||+++++...... ...+.
T Consensus 206 -~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i-------------~d~~~~~~~~~~~---------------~~~~~ 256 (357)
T 3i2n_A 206 -TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHV-------------FDMRTQHPTKGFA---------------SVSEK 256 (357)
T ss_dssp -EECSSCEEEEEESCSSSSCCEEEEEESTTEEEE-------------EEEEEEETTTEEE---------------EEEEE
T ss_pred -cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEE-------------EeCcCCCccccee---------------eeccC
Confidence 45888999999999 9999999999999999 9988765511000 00111
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
+|.. .|++++|+|+++. +
T Consensus 257 ~~~~----------------------------------------------------------~v~~~~~~~~~~~----~ 274 (357)
T 3i2n_A 257 AHKS----------------------------------------------------------TVWQVRHLPQNRE----L 274 (357)
T ss_dssp CCSS----------------------------------------------------------CEEEEEEETTEEE----E
T ss_pred CCcC----------------------------------------------------------CEEEEEECCCCCc----E
Confidence 3332 3455555555542 7
Q ss_pred EEEEeCCCeEEEEECCCC-------------------eEEEEecCCCCCEEEEEEeCCCCEEE-EEeCCC-EEEEEecCC
Q psy467 295 TTSSSADRTVNFWDLEKF-------------------SLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEG-LKVYGWEPA 353 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~-------------------~~l~tl~gh~~~VtslafSpdG~~La-sgs~DG-I~IWDl~tg 353 (845)
+++|+.||.|++||++++ +++..+.+|...|++++|+|+|++|+ +++.|+ |+|||+.+.
T Consensus 275 l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 275 FLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 999999999999998753 46788889999999999999999998 799999 999999876
Q ss_pred ce
Q psy467 354 RQ 355 (845)
Q Consensus 354 k~ 355 (845)
+.
T Consensus 355 ~~ 356 (357)
T 3i2n_A 355 NK 356 (357)
T ss_dssp --
T ss_pred cc
Confidence 53
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-31 Score=295.44 Aligned_cols=263 Identities=12% Similarity=0.193 Sum_probs=218.7
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC---CCeeEEEec----------C--CCCCeEEEE--EcCCCCEEEE
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALG---KSNCIMSLS----------G--HSTPVESVQ--FGNGEETLSA 75 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~---t~~~i~~l~----------~--h~~~V~sLa--fSpdg~~LaS 75 (845)
+|.+.|++++|+| ++++|++|+.||.|++||+. +++....+. . +...+.++. +++++.+|++
T Consensus 109 ~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 109 DCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp ECSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE
T ss_pred cCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE
Confidence 6999999999999 99999999999999999984 454443332 2 566777777 5688999999
Q ss_pred EECCCcEEEEECCCCcEEEEEcC--CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc-CCCCCeEEEEEec
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNG--HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-GHSKSINSIRFSP 152 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~--h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-~h~~~V~sLafSP 152 (845)
|+.||.|++||+.+++.+..+.. |...|++++|+|++++|++|+.||.|++||+++++++..+. .|...|.+++|+|
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECT
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecc
Confidence 99999999999999999999987 88999999999999999999999999999999999999886 6788999996665
Q ss_pred ----CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEe
Q psy467 153 ----DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVT 228 (845)
Q Consensus 153 ----dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~ 228 (845)
++.+|++++.||.|++ ||+.+++. +..+.++... +
T Consensus 268 ~~s~~~~~l~s~~~dg~i~i-------------wd~~~~~~--------------------~~~~~~~~~~-------~- 306 (437)
T 3gre_A 268 FYGKNSVIVVGGSSKTFLTI-------------WNFVKGHC--------------------QYAFINSDEQ-------P- 306 (437)
T ss_dssp TTCTTEEEEEEESTTEEEEE-------------EETTTTEE--------------------EEEEESSSSC-------C-
T ss_pred ccCCCccEEEEEcCCCcEEE-------------EEcCCCcE--------------------EEEEEcCCCC-------C-
Confidence 6779999999999999 99998887 6677766655 3
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccc--ccccCceeEEEcCCCCcccceEEEEEeCCCeEEE
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCV--PVSVSRTSLSILPQSPMLCFILTTSSSADRTVNF 306 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~--~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~I 306 (845)
..+.|+|++......... .+...|++++|+ +++ +|++|+.|+.|++
T Consensus 307 --------------------------~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-----~l~s~~~d~~i~~ 354 (437)
T 3gre_A 307 --------------------------SMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-----ILLTDEATSSIVM 354 (437)
T ss_dssp --------------------------CGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-----EEEEEGGGTEEEE
T ss_pred --------------------------ccceecccccccccceecccccCCceEEEEEC-Cce-----EEEecCCCCeEEE
Confidence 333344444322222222 256778999999 666 8999999999999
Q ss_pred EECCCCeEEEEecC-------------------------------------CCCCEEEEEEeCC--CCEEEEEeCCC-EE
Q psy467 307 WDLEKFSLVSTTEK-------------------------------------NSSTIRRLTFSEG--GECLLGGDTEG-LK 346 (845)
Q Consensus 307 WDl~s~~~l~tl~g-------------------------------------h~~~VtslafSpd--G~~Lasgs~DG-I~ 346 (845)
||+.++++...+.+ |...|++++|+++ +.+|++|+.|| |+
T Consensus 355 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~ 434 (437)
T 3gre_A 355 FSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIG 434 (437)
T ss_dssp EETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEE
T ss_pred EECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEE
Confidence 99998876666654 8889999999998 88999999999 99
Q ss_pred EEE
Q psy467 347 VYG 349 (845)
Q Consensus 347 IWD 349 (845)
||+
T Consensus 435 iw~ 437 (437)
T 3gre_A 435 IFQ 437 (437)
T ss_dssp EEC
T ss_pred EeC
Confidence 995
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=290.28 Aligned_cols=280 Identities=18% Similarity=0.297 Sum_probs=226.9
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe----eEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECCCC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN----CIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~----~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~tg 90 (845)
.....++++|+...++++++.||.|+||++.+.. .+..+.+|...|.+++|+| ++++|++|+.||.|++||+.++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 3455688888333445567889999999996542 3456788999999999999 9999999999999999999987
Q ss_pred -------cEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEE--cCCCCCeEEEEEecCCCEEEEE
Q psy467 91 -------TVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTY--RGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 91 -------~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~--~~h~~~V~sLafSPdg~~Lasg 160 (845)
+.+..+.+|...|.+++|+|++ ++|++++.||.|++||+++++.+..+ ..|...|.+++|+|++++|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 5678888999999999999998 69999999999999999999999999 7899999999999999999999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEE-ecCCCCCccceeeEeeeccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSF-TKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~-~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
+.||.|++ ||+++++. +..+ ..|... .+
T Consensus 195 ~~d~~i~i-------------wd~~~~~~--------------------~~~~~~~~~~~------~~------------ 223 (402)
T 2aq5_A 195 CRDKRVRV-------------IEPRKGTV--------------------VAEKDRPHEGT------RP------------ 223 (402)
T ss_dssp ETTSEEEE-------------EETTTTEE--------------------EEEEECSSCSS------SC------------
T ss_pred ecCCcEEE-------------EeCCCCce--------------------eeeeccCCCCC------cc------------
Confidence 99999999 99998776 5444 333221 01
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE---eCCCeEEEEECCCCeE-E
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS---SADRTVNFWDLEKFSL-V 315 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg---s~DG~I~IWDl~s~~~-l 315 (845)
..+.|+|++. +|++| +.|+.|++||+++++. +
T Consensus 224 ---------------~~~~~~~~~~-----------------------------~l~~g~~~~~d~~i~iwd~~~~~~~~ 259 (402)
T 2aq5_A 224 ---------------VHAVFVSEGK-----------------------------ILTTGFSRMSERQVALWDTKHLEEPL 259 (402)
T ss_dssp ---------------CEEEECSTTE-----------------------------EEEEEECTTCCEEEEEEETTBCSSCS
T ss_pred ---------------eEEEEcCCCc-----------------------------EEEEeccCCCCceEEEEcCccccCCc
Confidence 3445555544 89998 7899999999988653 3
Q ss_pred EEec-CCCCCEEEEEEeCCCCEEEE-EeCCC-EEEEEecCCce-EEEecC--CCCCeEEEEEc-CCceEEEE---EEEEe
Q psy467 316 STTE-KNSSTIRRLTFSEGGECLLG-GDTEG-LKVYGWEPARQ-YDAQPM--GWGKVQDLAVT-GTQLWFRR---VGTWS 385 (845)
Q Consensus 316 ~tl~-gh~~~VtslafSpdG~~Las-gs~DG-I~IWDl~tgk~-l~tl~~--h~~~VtsVafS-dg~lLaaS---VsiW~ 385 (845)
.... .|...+.+++|+|++++|++ |+.|+ |++||+.+++. +..+.. |...|++++|+ ++.+++++ +.+|.
T Consensus 260 ~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~ 339 (402)
T 2aq5_A 260 SLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYK 339 (402)
T ss_dssp EEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEE
T ss_pred eEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecceeEEEEE
Confidence 2332 46778999999999999975 44688 99999999874 444443 56899999999 77777655 88897
Q ss_pred eCCCC
Q psy467 386 HQDSG 390 (845)
Q Consensus 386 ~d~~~ 390 (845)
+....
T Consensus 340 l~~~~ 344 (402)
T 2aq5_A 340 LHERK 344 (402)
T ss_dssp EETTE
T ss_pred cCCCc
Confidence 76543
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-30 Score=283.96 Aligned_cols=272 Identities=8% Similarity=0.112 Sum_probs=211.3
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCC-------eEEEEECCCCee----------EEEecCCCCCeEEEEEcCCCCEEEEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDK-------KVNLWALGKSNC----------IMSLSGHSTPVESVQFGNGEETLSAGC 77 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG-------~I~IWdl~t~~~----------i~~l~~h~~~V~sLafSpdg~~LaSgs 77 (845)
.-+|.|++|+| ++++|++|+.+. .|++|++..+.. ...+.+|...|.+++++ ++.+++|+
T Consensus 14 g~PV~sv~fs~-dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~ 90 (365)
T 4h5i_A 14 GYPAYGAKFLN-NDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGC 90 (365)
T ss_dssp SSCEEEEEEEE-TTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEEC
T ss_pred CCCEEEEEEeC-CCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEE
Confidence 45899999999 999999997543 599999865431 13467788899888775 55677664
Q ss_pred -----------CCCcEEEEECCCCcEE----EEEc-----CCCCCeEEEEEccCCCEEEEEE--CCCeEEEEECCCCceE
Q psy467 78 -----------QSGSIKIWNLAVPTVQ----RTLN-----GHKSSITSVDFHPYGDYLCSGS--LDSFIKLWDLRRKGCI 135 (845)
Q Consensus 78 -----------~DGtV~VWDl~tg~~v----~~l~-----~h~~~V~~lafspdg~~Lasgs--~DG~I~IWDl~t~~~l 135 (845)
.|+.+++|++.+.... .... .+...+.+++|+|||+++++++ .|++|++||+.+++++
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 4678999998764321 2221 2345688999999999987654 7899999999999999
Q ss_pred EEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEE--
Q psy467 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSF-- 213 (845)
Q Consensus 136 ~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~-- 213 (845)
..+. |...|.+++|+|||+++++++.+ .+.+ |+..++.. +...
T Consensus 171 ~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~-------------~~~~~~~~--------------------~~~~~~ 215 (365)
T 4h5i_A 171 FEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEV-------------ISTVTGSC--------------------IARKTD 215 (365)
T ss_dssp EEEE-CSSCCCEEEECTTSSEEEEECSS-CEEE-------------EETTTCCE--------------------EEEECC
T ss_pred EEeC-CCCceEEEEEccCCceEEeccce-eEEE-------------EEeccCcc--------------------eeeeec
Confidence 8886 77889999999999999999865 5666 77666554 2211
Q ss_pred ecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccce
Q psy467 214 TKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFI 293 (845)
Q Consensus 214 ~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~ 293 (845)
..|. ..+.+++|+|+++
T Consensus 216 ~~~~----------------------------------------------------------~~v~~v~fspdg~----- 232 (365)
T 4h5i_A 216 FDKN----------------------------------------------------------WSLSKINFIADDT----- 232 (365)
T ss_dssp CCTT----------------------------------------------------------EEEEEEEEEETTE-----
T ss_pred CCCC----------------------------------------------------------CCEEEEEEcCCCC-----
Confidence 1111 2234445555554
Q ss_pred EEEEEeCCC----eEEEEECCCCeE----EEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe-cCCC
Q psy467 294 LTTSSSADR----TVNFWDLEKFSL----VSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ-PMGW 363 (845)
Q Consensus 294 lLatgs~DG----~I~IWDl~s~~~----l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl-~~h~ 363 (845)
++++++.|+ .+++||+..... ...+.+|...|++++|||||++||+|+.|+ |+|||+.+++++..+ .+|.
T Consensus 233 ~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~ 312 (365)
T 4h5i_A 233 VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS 312 (365)
T ss_dssp EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS
T ss_pred EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc
Confidence 889988887 688999877643 456778999999999999999999999999 999999999999875 7899
Q ss_pred CCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 364 GKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 364 ~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
..|++|+|+ ||++|+++ |.+|.+.
T Consensus 313 ~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 313 FAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 999999999 99999887 9999874
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-28 Score=261.70 Aligned_cols=251 Identities=21% Similarity=0.367 Sum_probs=217.5
Q ss_pred ceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC---eeEEEecCCCCCeEEEEEcCCCCEE
Q psy467 3 AKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS---NCIMSLSGHSTPVESVQFGNGEETL 73 (845)
Q Consensus 3 irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~---~~i~~l~~h~~~V~sLafSpdg~~L 73 (845)
+++|++ ..+..|.+.|.+++|+| ++++|++++.||.|++|++.+. +.+..+.+|...|.+++| ++++|
T Consensus 41 v~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l 117 (313)
T 3odt_A 41 VRLWSKDDQWLGTVVYTGQGFLNSVCYDS-EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVV 117 (313)
T ss_dssp EEEEEESSSEEEEEEEECSSCEEEEEEET-TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEE
T ss_pred EEEEECCCCEEEEEeecCCccEEEEEECC-CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEE
Confidence 677774 56789999999999999 9999999999999999998654 567788999999999999 57899
Q ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcC-CCCCeEEEEEe
Q psy467 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKSINSIRFS 151 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~~~V~sLafS 151 (845)
++++.||.|++|| .++....+..|...+.+++|+| +++++++++.||.|++|| ..+....+.. |...+.+++|+
T Consensus 118 ~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~ 193 (313)
T 3odt_A 118 ISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVV 193 (313)
T ss_dssp EEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEE
T ss_pred EEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEc
Confidence 9999999999999 6788888889999999999998 899999999999999999 4567777776 88999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 152 PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 152 Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
|++. +++++.||.|++ ||+++++. +..+.+|... +
T Consensus 194 ~~~~-~~~~~~dg~i~i-------------~d~~~~~~--------------------~~~~~~~~~~-------i---- 228 (313)
T 3odt_A 194 DDGH-FISCSNDGLIKL-------------VDMHTGDV--------------------LRTYEGHESF-------V---- 228 (313)
T ss_dssp ETTE-EEEEETTSEEEE-------------EETTTCCE--------------------EEEEECCSSC-------E----
T ss_pred CCCe-EEEccCCCeEEE-------------EECCchhh--------------------hhhhhcCCce-------E----
Confidence 9988 999999999999 99998777 6666666555 5
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
..++|+|++. +++++.||.|++||+.+
T Consensus 229 -----------------------~~~~~~~~~~------------------------------l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 229 -----------------------YCIKLLPNGD------------------------------IVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp -----------------------EEEEECTTSC------------------------------EEEEETTSEEEEECTTT
T ss_pred -----------------------EEEEEecCCC------------------------------EEEEecCCEEEEEECCC
Confidence 5556665554 77889999999999999
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
++++..+..|...|.+++|+|+|+ +++++.|+ |++|++.+++.....
T Consensus 256 ~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 256 GSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred CceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 999999999999999999999998 55688888 999999987765443
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=295.81 Aligned_cols=276 Identities=17% Similarity=0.218 Sum_probs=212.6
Q ss_pred cceeeee--------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC--CCCCeEEEEEcCCCC
Q psy467 2 RAKVEKA--------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG--HSTPVESVQFGNGEE 71 (845)
Q Consensus 2 ~irlw~l--------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~--h~~~V~sLafSpdg~ 71 (845)
++++|++ ..+.+|.+.|++|+|+|.++++|++|+.||+|++||+.++........ +...+.+++|+|++.
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSR 222 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTT
T ss_pred EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCC
Confidence 4678874 346789999999999987789999999999999999987654443333 345688999999999
Q ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCCCceEEE---EcCCCCCeEE
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIYT---YRGHSKSINS 147 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t~~~l~~---~~~h~~~V~s 147 (845)
+|++|+.||.|++||++ ++.+..+.+|...|.+++|+|++. +|++|+.|+.|++||+++.+.... ..+|...|.+
T Consensus 223 ~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 301 (435)
T 4e54_B 223 MVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNA 301 (435)
T ss_dssp EEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEE
T ss_pred EEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccc
Confidence 99999999999999997 456677889999999999999876 788999999999999987654433 3568899999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeE
Q psy467 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
++|+|+|++|++++.||.|++ ||+.++.. ...+..|...... ....
T Consensus 302 ~~~spdg~~l~s~~~D~~i~i-------------wd~~~~~~--------------------~~~~~~~~~~~~~-~~~~ 347 (435)
T 4e54_B 302 ACFSPDGARLLTTDQKSEIRV-------------YSASQWDC--------------------PLGLIPHPHRHFQ-HLTP 347 (435)
T ss_dssp CCBCTTSSEEEEEESSSCEEE-------------EESSSSSS--------------------EEEECCCCCCCCS-SSCC
T ss_pred eeECCCCCeeEEEcCCCEEEE-------------EECCCCcc--------------------ceEEecccccccc-ccee
Confidence 999999999999999999999 99998877 4444444322000 0000
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEE
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IW 307 (845)
....|+|++. +..+++++++.. +++++..++.|++|
T Consensus 348 ---------------------------~~~~~~~~~~-------------~~~~~~~~d~~~----~~~~~~~~~~i~iw 383 (435)
T 4e54_B 348 ---------------------------IKAAWHPRYN-------------LIVVGRYPDPNF----KSCTPYELRTIDVF 383 (435)
T ss_dssp ---------------------------CBCEECSSSS-------------CEEEECCCCTTS----CCSSTTCCCCEEEE
T ss_pred ---------------------------EEEEEcCCCC-------------EEEEEEcCCCCe----EEEEecCCCEEEEE
Confidence 3345566554 344556666662 34444456789999
Q ss_pred ECCCCeEEEEec-CCCCCEEEE-EEeCCCCEEEEEeCCCEEEEEecCCceE
Q psy467 308 DLEKFSLVSTTE-KNSSTIRRL-TFSEGGECLLGGDTEGLKVYGWEPARQY 356 (845)
Q Consensus 308 Dl~s~~~l~tl~-gh~~~Vtsl-afSpdG~~Lasgs~DGI~IWDl~tgk~l 356 (845)
|..+++++..+. +|...|.++ +|+|+|++|++|+++.|+||++++++..
T Consensus 384 d~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 384 DGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTR 434 (435)
T ss_dssp CSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-----
T ss_pred ECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeee
Confidence 999999988875 678888887 6999999999987433999999988653
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-29 Score=281.46 Aligned_cols=264 Identities=11% Similarity=0.060 Sum_probs=221.0
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe---eEEEecC------------------------------------
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN---CIMSLSG------------------------------------ 56 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~---~i~~l~~------------------------------------ 56 (845)
.+|.+++|++ +|++|+++ .++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~-dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSR-DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECS-SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecC-CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 5789999999 88876666 47799999999888 6655543
Q ss_pred ------------------CCCCeEEEEEcCCCCEE-EEEECCCcEEEEECC--CCcEEEEEc--CCCCCeEEEEEccCCC
Q psy467 57 ------------------HSTPVESVQFGNGEETL-SAGCQSGSIKIWNLA--VPTVQRTLN--GHKSSITSVDFHPYGD 113 (845)
Q Consensus 57 ------------------h~~~V~sLafSpdg~~L-aSgs~DGtV~VWDl~--tg~~v~~l~--~h~~~V~~lafspdg~ 113 (845)
|...|.+++|+|++++| ++++.||.|++||+. +++.+..+. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 33379999999999996 889899999999999 888888775 5678899999999999
Q ss_pred EEEEEECCCeEEEEECCCCceEE----EEcCCCCCeEEEEEecC---CCEEEEEeCCCcEEEeeeeccCCceeEEEECCC
Q psy467 114 YLCSGSLDSFIKLWDLRRKGCIY----TYRGHSKSINSIRFSPD---GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL 186 (845)
Q Consensus 114 ~Lasgs~DG~I~IWDl~t~~~l~----~~~~h~~~V~sLafSPd---g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t 186 (845)
+|++|+.+|.|++|++.++.... .+.+|...|.+++|+|+ +++|++++.|+.|++ ||+.+
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~v-------------wd~~~ 229 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKI-------------SHYPQ 229 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEE-------------EEESC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEE-------------EECCC
Confidence 99999999999999998776543 67789999999999999 999999999999999 99988
Q ss_pred CccCCCCCCCCCcceeecCCCCeEEE-EecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCc
Q psy467 187 VHPLGTPPPQYTSSVPFSHNTSLRKS-FTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSL 265 (845)
Q Consensus 187 g~~l~~~~~~~i~svs~spdg~~l~~-~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~ 265 (845)
++. +.. +.+|... | .+++|+ ++.
T Consensus 230 ~~~--------------------~~~~~~~h~~~-------v---------------------------~~~~~s-d~~- 253 (450)
T 2vdu_B 230 CFI--------------------VDKWLFGHKHF-------V---------------------------SSICCG-KDY- 253 (450)
T ss_dssp TTC--------------------EEEECCCCSSC-------E---------------------------EEEEEC-STT-
T ss_pred Cce--------------------eeeeecCCCCc-------e---------------------------EEEEEC-CCC-
Confidence 776 444 3345444 4 555666 555
Q ss_pred CCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC-------------------------
Q psy467 266 NRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK------------------------- 320 (845)
Q Consensus 266 ~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g------------------------- 320 (845)
+|++|+.|+.|++||+.+++++..+..
T Consensus 254 ----------------------------~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (450)
T 2vdu_B 254 ----------------------------LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDI 305 (450)
T ss_dssp ----------------------------EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------C
T ss_pred ----------------------------EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccccc
Confidence 999999999999999999998888763
Q ss_pred CCCCEEEEEEeCCCCEEEEEe-CCC-EEEEEe--cCC---ceEEEecCCCCCeEEEEEcCCceEEE
Q psy467 321 NSSTIRRLTFSEGGECLLGGD-TEG-LKVYGW--EPA---RQYDAQPMGWGKVQDLAVTGTQLWFR 379 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs-~DG-I~IWDl--~tg---k~l~tl~~h~~~VtsVafSdg~lLaa 379 (845)
+...|.+++|+|++++|++++ .++ |+||++ .++ +.+..+..| +.|.+++|+++.++++
T Consensus 306 ~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~ 370 (450)
T 2vdu_B 306 IEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVT 370 (450)
T ss_dssp BCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEE
T ss_pred ceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEE
Confidence 235799999999999999999 788 999999 665 667788888 8899999996555554
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-29 Score=265.01 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=211.1
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC----cEEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEE
Q psy467 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP----TVQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIK 125 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg----~~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~ 125 (845)
..+.+|...|++++|+|++++|++|+.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 346789999999999999999999999999999999876 46777889999999999999 699999999999999
Q ss_pred EEECCCC---------ceEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC
Q psy467 126 LWDLRRK---------GCIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP 194 (845)
Q Consensus 126 IWDl~t~---------~~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~ 194 (845)
+||++++ +.+..+..|...|.+++|+|+ +++|++++.||.|++ ||+++++.+....
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~i-------------wd~~~~~~~~~~~ 151 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRL-------------YDALEPSDLRSWT 151 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEE-------------EECSSTTCTTCCE
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEE-------------ecCCChHHhcccc
Confidence 9999876 567888899999999999999 999999999999999 9999877632210
Q ss_pred CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccccc
Q psy467 195 PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPV 274 (845)
Q Consensus 195 ~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~ 274 (845)
... . + ..+.+.+. .+
T Consensus 152 ---------------~~~-~------------~---------------------------~~~~~~~~----------~~ 166 (351)
T 3f3f_A 152 ---------------LTS-E------------M---------------------------KVLSIPPA----------NH 166 (351)
T ss_dssp ---------------EEE-E------------E---------------------------ESCSCCCS----------SC
T ss_pred ---------------ccc-c------------c---------------------------cccccccC----------Cc
Confidence 000 0 0 00111111 12
Q ss_pred ccCceeEEEcCC---CCcccceEEEEEeCCCeEEEEECCCCeE--EEEecCCCCCEEEEEEeCCC----CEEEEEeCCC-
Q psy467 275 SVSRTSLSILPQ---SPMLCFILTTSSSADRTVNFWDLEKFSL--VSTTEKNSSTIRRLTFSEGG----ECLLGGDTEG- 344 (845)
Q Consensus 275 ~~~I~slafSPd---g~~~~~~lLatgs~DG~I~IWDl~s~~~--l~tl~gh~~~VtslafSpdG----~~Lasgs~DG- 344 (845)
...+.+++|+|+ +. ++++++.|+.+.+|+...++. +..+.+|...|++++|+|++ ++|++++.|+
T Consensus 167 ~~~~~~~~~~p~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPE-----KLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp SCCCEEEEECCCSSSCC-----EEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred ccceeEEEeccCCCCCc-----EEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 345666777765 55 899999999999998887765 77888999999999999998 8999999999
Q ss_pred EEEEEecCC----------------------------------------------ceEEEecCCCCCeEEEEEc-CCceE
Q psy467 345 LKVYGWEPA----------------------------------------------RQYDAQPMGWGKVQDLAVT-GTQLW 377 (845)
Q Consensus 345 I~IWDl~tg----------------------------------------------k~l~tl~~h~~~VtsVafS-dg~lL 377 (845)
|++||+.++ +.+..+.+|...|++++|+ ++++|
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE
Confidence 999999875 5677888999999999999 88888
Q ss_pred EEE-----EEEEeeCC
Q psy467 378 FRR-----VGTWSHQD 388 (845)
Q Consensus 378 aaS-----VsiW~~d~ 388 (845)
+++ |.+|....
T Consensus 322 ~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATY 337 (351)
T ss_dssp EEEETTSCEEEEEECT
T ss_pred EEecCCCcEEEEecCc
Confidence 877 99998753
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-28 Score=271.17 Aligned_cols=256 Identities=17% Similarity=0.222 Sum_probs=207.5
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCC---CCEEEEEECCCcEEEEECCC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG---EETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpd---g~~LaSgs~DGtV~VWDl~t 89 (845)
+|.+.|.+++|+|+++.+|++++.||.|++||+.+++....+. +...+.++.|++. +.++++++.+|.|++||+.+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 5999999999999778899999999999999999999888887 7888999999984 45999999999999999999
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCCCc-eEEEE---------------cCCCCCeEEEEEec
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKG-CIYTY---------------RGHSKSINSIRFSP 152 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t~~-~l~~~---------------~~h~~~V~sLafSP 152 (845)
++.+..+..|...|.+++|+|+++ .|++++.||.|++||++++. ++..+ ..|...|.+++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 999999999999999999999998 58999999999999998765 44444 46888999999999
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++++|++++.||.|++ ||+.+++..... ..+..... .
T Consensus 256 ~~~~l~~~~~dg~i~v-------------wd~~~~~~~~~~--------------------~~~~~~~~-----~----- 292 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRL-------------WNSSNGENTLVN--------------------YGKVCNNS-----K----- 292 (408)
T ss_dssp TSSEEEEEETTSCEEE-------------EETTTCCBCCCC--------------------CCCCCCCC-----S-----
T ss_pred CCCEEEEecCCCeEEE-------------EECCCCccceec--------------------cccccccc-----c-----
Confidence 9999999999999999 999987762111 11100000 0
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
.. ....+... .+. .+++++.|+.|++||+.++
T Consensus 293 ------------------~~--~~~~~~~~-----------------------~~~-----~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 293 ------------------KG--LKFTVSCG-----------------------CSS-----EFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp ------------------SC--CCCEECCS-----------------------SSS-----CEEEEEETTEEEEEETTTC
T ss_pred ------------------cc--ceeEEecC-----------------------CCc-----eEEEEecCCEEEEEECcCC
Confidence 00 01111111 111 5667778999999999999
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP 360 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~ 360 (845)
+++..+.+|...|++++|+|++++|++++.|| |++|++.+++.+....
T Consensus 325 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 325 EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------
T ss_pred cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 99999999999999999999999999999999 9999999988776544
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=269.05 Aligned_cols=258 Identities=19% Similarity=0.243 Sum_probs=209.5
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC--CCcEEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeE
Q psy467 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA--VPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFI 124 (845)
Q Consensus 49 ~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~--tg~~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I 124 (845)
+.+..+.+|...|.+++|+|++++|++|+.||.|++||+. +++.+..+.+|...|++++|+++ +++|++++.||.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 4566788999999999999999999999999999999998 56777889999999999999987 8999999999999
Q ss_pred EEEECCCCc--eEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcc
Q psy467 125 KLWDLRRKG--CIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS 200 (845)
Q Consensus 125 ~IWDl~t~~--~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~s 200 (845)
++||+.+++ .+..+..|...|.+++|+|+ +++|++++.|+.|++ ||+.++....
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v-------------~d~~~~~~~~--------- 139 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV-------------VEFKENGTTS--------- 139 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE-------------EECCTTSCCC---------
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEE-------------EecCCCCcee---------
Confidence 999999887 77788889999999999999 999999999999999 9998764411
Q ss_pred eeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCcee
Q psy467 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTS 280 (845)
Q Consensus 201 vs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~s 280 (845)
...+..|... + .+++|+|... .....
T Consensus 140 ---------~~~~~~~~~~-------v---------------------------~~~~~~~~~~-----------~~~~~ 165 (379)
T 3jrp_A 140 ---------PIIIDAHAIG-------V---------------------------NSASWAPATI-----------EEDGE 165 (379)
T ss_dssp ---------EEEEECCTTC-------E---------------------------EEEEECCCC-----------------
T ss_pred ---------eEEecCCCCc-------e---------------------------EEEEEcCccc-----------ccccc
Confidence 3334455555 5 6667776422 00001
Q ss_pred EEEcCCCCcccceEEEEEeCCCeEEEEECCCCe----EEEEecCCCCCEEEEEEeCC---CCEEEEEeCCC-EEEEEecC
Q psy467 281 LSILPQSPMLCFILTTSSSADRTVNFWDLEKFS----LVSTTEKNSSTIRRLTFSEG---GECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 281 lafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~----~l~tl~gh~~~VtslafSpd---G~~Lasgs~DG-I~IWDl~t 352 (845)
....+++. ++++|+.||.|++||++++. ++..+.+|...|++++|+|+ +++|++++.|+ |++||+.+
T Consensus 166 ~~~~~~~~-----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 166 HNGTKESR-----KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ----CTTC-----EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ccCCCCCC-----EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 11133455 89999999999999997653 56778899999999999999 89999999999 99999998
Q ss_pred Cc---eEEE--ecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 353 AR---QYDA--QPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 353 gk---~l~t--l~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
+. .... ...|...|++++|+ ++++|+++ +.+|..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 74 2222 33488899999999 88888876 9999775
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-29 Score=282.11 Aligned_cols=252 Identities=20% Similarity=0.337 Sum_probs=216.2
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC----------CeeEEEecCCCCCeEEEEEcCCCC-EEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK----------SNCIMSLSGHSTPVESVQFGNGEE-TLSAG 76 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t----------~~~i~~l~~h~~~V~sLafSpdg~-~LaSg 76 (845)
.....+|.+.|++++|+|+++.+||+++.||.|++|++.+ ...+..+.+|...|.+++|+|++. +|++|
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3556789999999999994478999999999999999976 677888999999999999999988 99999
Q ss_pred ECCCcEEEEECCCCcE-------EEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCC---ceEEEEcCCCCCe
Q psy467 77 CQSGSIKIWNLAVPTV-------QRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRK---GCIYTYRGHSKSI 145 (845)
Q Consensus 77 s~DGtV~VWDl~tg~~-------v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~---~~l~~~~~h~~~V 145 (845)
+.||.|++||+.++.. ...+.+|...|.+++|+| ++.+|++++.||.|++||++++ ..+..+..|...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987321 456678999999999999 6789999999999999999987 5777888899999
Q ss_pred EEEEEecCCC-EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 146 NSIRFSPDGQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSPdg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
.+++|+|++. ++++|+.||.|++ ||+++... .+..+..|...
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~v-------------wd~~~~~~-------------------~~~~~~~h~~~----- 323 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVAL-------------WDLRNLKL-------------------KLHSFESHKDE----- 323 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEE-------------EETTCTTS-------------------CSEEEECCSSC-----
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEE-------------EeCCCCCC-------------------CeEEeecCCCC-----
Confidence 9999999887 6889999999999 99987432 04555555555
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ .++.|+|++. . +|++++.|+.|
T Consensus 324 --v---------------------------~~i~~sp~~~------------------------~----~l~s~~~d~~i 346 (430)
T 2xyi_A 324 --I---------------------------FQVQWSPHNE------------------------T----ILASSGTDRRL 346 (430)
T ss_dssp --E---------------------------EEEEECSSCT------------------------T----EEEEEETTSCC
T ss_pred --E---------------------------EEEEECCCCC------------------------C----EEEEEeCCCcE
Confidence 5 5566666553 1 79999999999
Q ss_pred EEEECCC--------------CeEEEEecCCCCCEEEEEEeCCCC-EEEEEeCCC-EEEEEecCC
Q psy467 305 NFWDLEK--------------FSLVSTTEKNSSTIRRLTFSEGGE-CLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 305 ~IWDl~s--------------~~~l~tl~gh~~~VtslafSpdG~-~Lasgs~DG-I~IWDl~tg 353 (845)
++||+.. .+++..+.+|...|++++|+|+++ +|++++.|+ |+||++...
T Consensus 347 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 347 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 9999986 367888889999999999999999 899999999 999998753
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-29 Score=279.70 Aligned_cols=249 Identities=16% Similarity=0.258 Sum_probs=208.7
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC-------eeEEEecCCCCCeEEEEEcCCC-CEEEEEECCCc
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-------NCIMSLSGHSTPVESVQFGNGE-ETLSAGCQSGS 81 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~-------~~i~~l~~h~~~V~sLafSpdg-~~LaSgs~DGt 81 (845)
.+.+|.+.|++++|+|.++++|++|+.||.|+||++.++ +.+..+.+|...|.+++|+|++ ++|++++.||.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 477899999999999977899999999999999999887 6688899999999999999998 69999999999
Q ss_pred EEEEECCCCcEEEEE--cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE-cCCCCC-eEEEEEecCCCEE
Q psy467 82 IKIWNLAVPTVQRTL--NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-RGHSKS-INSIRFSPDGQWI 157 (845)
Q Consensus 82 V~VWDl~tg~~v~~l--~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~h~~~-V~sLafSPdg~~L 157 (845)
|++||+.+++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+ ..|.+. +.+++|+|++++|
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEE
T ss_pred EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEE
Confidence 999999999999999 789999999999999999999999999999999999999988 678765 8999999999999
Q ss_pred EEE---eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe-cCCCCCccceeeEeeeccc
Q psy467 158 ASG---GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT-KGRPGGTKAKIDVTRIEEN 233 (845)
Q Consensus 158 asg---s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~-~h~~~~~~~~i~V~~i~~~ 233 (845)
++| +.|+.|++ ||++++... +.... .+.
T Consensus 236 ~~g~~~~~d~~i~i-------------wd~~~~~~~-------------------~~~~~~~~~---------------- 267 (402)
T 2aq5_A 236 TTGFSRMSERQVAL-------------WDTKHLEEP-------------------LSLQELDTS---------------- 267 (402)
T ss_dssp EEEECTTCCEEEEE-------------EETTBCSSC-------------------SEEEECCCC----------------
T ss_pred EEeccCCCCceEEE-------------EcCccccCC-------------------ceEEeccCC----------------
Confidence 999 78999999 999876540 11111 111
Q ss_pred ccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE-EEeCCCeEEEEECCCC
Q psy467 234 AESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT-SSSADRTVNFWDLEKF 312 (845)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa-tgs~DG~I~IWDl~s~ 312 (845)
..+.+++|+|+++ +|+ +|+.||.|++||+.++
T Consensus 268 ------------------------------------------~~v~~~~~s~~~~-----~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 268 ------------------------------------------SGVLLPFFDPDTN-----IVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp ------------------------------------------SSCEEEEEETTTT-----EEEEEETTCSCEEEEEECSS
T ss_pred ------------------------------------------CceeEEEEcCCCC-----EEEEEEcCCCeEEEEEecCC
Confidence 1234445555554 665 5667999999999988
Q ss_pred eE-EEEecC--CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce
Q psy467 313 SL-VSTTEK--NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ 355 (845)
Q Consensus 313 ~~-l~tl~g--h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~ 355 (845)
+. +..+.. |...|.+++|+|++.++++ .++ +++|++.++++
T Consensus 301 ~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 301 APFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp TTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred CcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 73 444443 5689999999999998875 455 99999988653
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=300.93 Aligned_cols=267 Identities=16% Similarity=0.143 Sum_probs=209.0
Q ss_pred CCCcEEEEEEecCCC---------CEEEEE-------------------eCCCeEEEEECCCCeeE----EEecCCCCCe
Q psy467 14 HGASVNCLALGKKSG---------QVLATG-------------------GDDKKVNLWALGKSNCI----MSLSGHSTPV 61 (845)
Q Consensus 14 H~~~V~~LafSp~dg---------~~LaTg-------------------s~DG~I~IWdl~t~~~i----~~l~~h~~~V 61 (845)
+.+.|.+|+|+| ++ ++||+| +.|++|+||++.+++.. ..+.+|.+.|
T Consensus 132 ~~~~V~sv~w~p-~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLN-IEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEV 210 (524)
T ss_dssp CCC--CCCSCEE-ECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSE
T ss_pred CCCceeEEEecc-cCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcE
Confidence 678999999999 54 567664 47789999999776542 4467788999
Q ss_pred EEEEEcCC------CCEEEEEECCCcEEEEECCCCcE-----------EEEEcCCCCCeEEEEEccCCCEEEEEECCCeE
Q psy467 62 ESVQFGNG------EETLSAGCQSGSIKIWNLAVPTV-----------QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFI 124 (845)
Q Consensus 62 ~sLafSpd------g~~LaSgs~DGtV~VWDl~tg~~-----------v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I 124 (845)
.+++|+|+ +.+||+++.||+|++||+.++.. ...+.+|...|++++|++++ .|++|+.||+|
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV 289 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFV 289 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEE
Confidence 99999996 57999999999999999987632 24678899999999999864 89999999999
Q ss_pred EEEECCCCc-eEEEEcCCCCCeEEE--EEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcc
Q psy467 125 KLWDLRRKG-CIYTYRGHSKSINSI--RFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS 200 (845)
Q Consensus 125 ~IWDl~t~~-~l~~~~~h~~~V~sL--afSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~s 200 (845)
++||++++. +...+.+|...|.++ +|+|++ ++|++++.|++|++ ||+++++.
T Consensus 290 ~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl-------------WD~~~~~~----------- 345 (524)
T 2j04_B 290 AEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI-------------FNPKDIAT----------- 345 (524)
T ss_dssp EEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE-------------ECGGGHHH-----------
T ss_pred EEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE-------------EECCCCCc-----------
Confidence 999998764 456688999999999 578887 89999999999999 99987766
Q ss_pred eeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCcee
Q psy467 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTS 280 (845)
Q Consensus 201 vs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~s 280 (845)
+..+.+|.... .+ .+++|+|++.
T Consensus 346 ---------~~~~~~~~~~~-----~v---------------------------~~v~fsp~~~---------------- 368 (524)
T 2j04_B 346 ---------TKTTVSRFRGS-----NL---------------------------VPVVYCPQIY---------------- 368 (524)
T ss_dssp ---------HCEEEEECSCC-----SC---------------------------CCEEEETTTT----------------
T ss_pred ---------ccccccccccC-----cc---------------------------cceEeCCCcC----------------
Confidence 33333332110 01 3444555444
Q ss_pred EEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 281 LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 281 lafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
.+++++.|+.|++||++++.++.++.+|.+.|++++|||+|++|++|+.|+ |+|||.... .+...
T Consensus 369 -------------~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~ 434 (524)
T 2j04_B 369 -------------SYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGI 434 (524)
T ss_dssp -------------EEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC
T ss_pred -------------eEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hcccc
Confidence 899999999999999999998888999999999999999999999999999 999998653 32222
Q ss_pred cC-----CCCCeEEEEEc-CCceE
Q psy467 360 PM-----GWGKVQDLAVT-GTQLW 377 (845)
Q Consensus 360 ~~-----h~~~VtsVafS-dg~lL 377 (845)
.. +...|++++|+ +++.+
T Consensus 435 ~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 435 KNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp ------CCCCEEEECBCCSSSCEE
T ss_pred ccCccceeeeEEEEeccCCCCCeE
Confidence 11 11247899999 77744
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-29 Score=272.89 Aligned_cols=259 Identities=17% Similarity=0.241 Sum_probs=195.8
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc--EEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEEEEE
Q psy467 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT--VQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 53 ~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~--~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWD 128 (845)
.+.+|...|++++|+|+|++||+|+.|++|++||+.++. .+..+.+|...|.+++|++ ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998875 4677889999999999986 488999999999999999
Q ss_pred CCCC--ceEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeec
Q psy467 129 LRRK--GCIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFS 204 (845)
Q Consensus 129 l~t~--~~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~s 204 (845)
++++ ..+..+.+|...|.+++|+|+ +.+|++++.|+.|++ ||++.+.....
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l-------------wd~~~~~~~~~------------ 142 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL-------------LTYTGEGQWEV------------ 142 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE-------------EEECSSSCEEE------------
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE-------------EecCCCCCcce------------
Confidence 9876 466778889999999999997 789999999999999 99876532000
Q ss_pred CCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEc
Q psy467 205 HNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSIL 284 (845)
Q Consensus 205 pdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafS 284 (845)
...+.+|... + ..+.|+|+... +........ ...
T Consensus 143 -----~~~~~~h~~~-------v---------------------------~~~~~~~~~~~---~~~~~~~~~----~~~ 176 (316)
T 3bg1_A 143 -----KKINNAHTIG-------C---------------------------NAVSWAPAVVP---GSLIDHPSG----QKP 176 (316)
T ss_dssp -----CCBTTSSSSC-------B---------------------------CCCEECCCCCC---------CCS----CCC
T ss_pred -----eeeeccccCC-------c---------------------------ceEEEccccCC---ccccccccc----cCc
Confidence 0011122222 2 34445544220 000000000 001
Q ss_pred CCCCcccceEEEEEeCCCeEEEEECCCC---eEEEEecCCCCCEEEEEEeCCC----CEEEEEeCCC-EEEEEecCC---
Q psy467 285 PQSPMLCFILTTSSSADRTVNFWDLEKF---SLVSTTEKNSSTIRRLTFSEGG----ECLLGGDTEG-LKVYGWEPA--- 353 (845)
Q Consensus 285 Pdg~~~~~~lLatgs~DG~I~IWDl~s~---~~l~tl~gh~~~VtslafSpdG----~~Lasgs~DG-I~IWDl~tg--- 353 (845)
.+++ +|++|+.|+.|++||++.. +++..+.+|...|.+++|+|++ .+|++++.|+ |+||++.+.
T Consensus 177 ~~~~-----~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~ 251 (316)
T 3bg1_A 177 NYIK-----RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN 251 (316)
T ss_dssp CCCC-----BEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC
T ss_pred cccc-----eEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc
Confidence 1233 7999999999999999754 5778889999999999999986 8999999999 999999863
Q ss_pred c-eEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 354 R-QYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 354 k-~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
+ ....+..|...|++++|+ ++++|+++ |.+|...
T Consensus 252 ~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 252 TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 1 223456788999999999 88888877 9999765
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=279.72 Aligned_cols=243 Identities=15% Similarity=0.183 Sum_probs=196.8
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC--cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC
Q psy467 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP--TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131 (845)
Q Consensus 54 l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg--~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t 131 (845)
+..+..+|++++|+|++++|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 3446779999999999999999999999999999988 77788889999999999999999999999999999999998
Q ss_pred Cc---eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 132 KG---CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 132 ~~---~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
+. ....+..|...|.+++|+|++++|++++.|+.|++ ||+.+++....
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i-------------wd~~~~~~~~~---------------- 137 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISV-------------CYFEQENDWWV---------------- 137 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEE-------------CCC-----CCC----------------
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEE-------------EEECCccccee----------------
Confidence 76 67778889999999999999999999999999999 99987653100
Q ss_pred eEEEEec-CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCC
Q psy467 209 LRKSFTK-GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQS 287 (845)
Q Consensus 209 ~l~~~~~-h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg 287 (845)
...+.. |... + .+++|+ |++
T Consensus 138 -~~~~~~~h~~~-------v---------------------------~~~~~~------------------------~~~ 158 (377)
T 3dwl_C 138 -SKHLKRPLRST-------I---------------------------LSLDWH------------------------PNN 158 (377)
T ss_dssp -CEEECSSCCSC-------E---------------------------EEEEEC------------------------TTS
T ss_pred -eeEeecccCCC-------e---------------------------EEEEEc------------------------CCC
Confidence 222332 3333 3 444444 444
Q ss_pred CcccceEEEEEeCCCeEEEEECC------------------CCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEE
Q psy467 288 PMLCFILTTSSSADRTVNFWDLE------------------KFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348 (845)
Q Consensus 288 ~~~~~~lLatgs~DG~I~IWDl~------------------s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IW 348 (845)
+ +|++++.|+.|++||+. .++++..+ +|...|++++|+|+|++|++++.|+ |++|
T Consensus 159 ~-----~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 159 V-----LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIA 232 (377)
T ss_dssp S-----EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-C
T ss_pred C-----EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 4 99999999999999985 35677777 8999999999999999999999999 9999
Q ss_pred EecCCce----EEEecCCCCCeEEEEEc-CCceEEEE----EEEEeeCCCC
Q psy467 349 GWEPARQ----YDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQDSG 390 (845)
Q Consensus 349 Dl~tgk~----l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d~~~ 390 (845)
|+.+++. +..+.+|...|++++|+ ++++|+++ +.+|..+...
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~ 283 (377)
T 3dwl_C 233 YPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESG 283 (377)
T ss_dssp EECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC--
T ss_pred ECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCc
Confidence 9999987 78889999999999999 99999888 6677655433
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-28 Score=272.30 Aligned_cols=247 Identities=13% Similarity=0.142 Sum_probs=192.1
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEe-----------CCCeEEEEECCCCeeE----EEe-----cCCCCCeEEEEEcCC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGG-----------DDKKVNLWALGKSNCI----MSL-----SGHSTPVESVQFGNG 69 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs-----------~DG~I~IWdl~t~~~i----~~l-----~~h~~~V~sLafSpd 69 (845)
.|.+|...|.+++++. +.+++|. .|+.+++|++.+.... ... ..+...+.+++||||
T Consensus 68 ~l~~~~~~v~s~~~~~---~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASK---GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp ECCTTSCCCCEEEEET---TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EccCCCCceEEEEeCC---CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 4778999999998854 6777664 4778999998654322 111 234566999999999
Q ss_pred CCEEEEEE--CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE--EcCCCCCe
Q psy467 70 EETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT--YRGHSKSI 145 (845)
Q Consensus 70 g~~LaSgs--~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~--~~~h~~~V 145 (845)
|++|++++ .|++|+|||+.+++++..+. |...|.+++|+|||+++++++.+ .+.+|+..++..+.. ...|...|
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEE
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCE
Confidence 99987654 68999999999999998887 77889999999999999999855 577777777776544 34578889
Q ss_pred EEEEEecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCc
Q psy467 146 NSIRFSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGT 221 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~ 221 (845)
.+++|+|+++++++++.|+ .+.. ||+....... .....+.+|..
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~~~i~~-------------~~~~~~~~~~----------------~~~~~~~~~~~--- 270 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKGIVLTK-------------ISIKSGNTSV----------------LRSKQVTNRFK--- 270 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCCEEEEE-------------EEEETTEEEE----------------EEEEEEESSCS---
T ss_pred EEEEEcCCCCEEEEEecCCcceeEEee-------------cccccceecc----------------eeeeeecCCCC---
Confidence 9999999999999999887 3555 8776544300 00112222322
Q ss_pred cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 222 KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 222 ~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
.|++++|+|||+ +||+|+.|
T Consensus 271 -------------------------------------------------------~V~~~~~Spdg~-----~lasgs~D 290 (365)
T 4h5i_A 271 -------------------------------------------------------GITSMDVDMKGE-----LAVLASND 290 (365)
T ss_dssp -------------------------------------------------------CEEEEEECTTSC-----EEEEEETT
T ss_pred -------------------------------------------------------CeEeEEECCCCC-----ceEEEcCC
Confidence 345556666665 99999999
Q ss_pred CeEEEEECCCCeEEEEe-cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 302 RTVNFWDLEKFSLVSTT-EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl-~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+.|+|||+.+++++.++ .+|...|++++|||||++||+|+.|+ |+||++...
T Consensus 291 ~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 291 NSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999885 68999999999999999999999999 999999653
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=304.85 Aligned_cols=255 Identities=21% Similarity=0.291 Sum_probs=210.2
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC--CCeeEEEecCCCCCeEEEEEcCC--CCEEEEEECCCcEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG--KSNCIMSLSGHSTPVESVQFGNG--EETLSAGCQSGSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~--t~~~i~~l~~h~~~V~sLafSpd--g~~LaSgs~DGtV~V 84 (845)
..+.+|.+.|++++|+| ++++|++|+.||.|+||++. ++..+..+.+|...|.+++|+++ +++|++|+.||.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 56889999999999999 89999999999999999997 55778889999999999999988 999999999999999
Q ss_pred EECCCCc--EEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCC--ceEEEEcCCCCCeEEEEEec------
Q psy467 85 WNLAVPT--VQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRK--GCIYTYRGHSKSINSIRFSP------ 152 (845)
Q Consensus 85 WDl~tg~--~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~--~~l~~~~~h~~~V~sLafSP------ 152 (845)
||+.+++ .+..+.+|...|.+++|+|+ ++++++|+.||.|++||++++ .....+..|...|.+++|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 9999986 77788889999999999999 999999999999999999876 34456678999999999999
Q ss_pred -------CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 153 -------DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 153 -------dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
++.++++|+.||.|++ ||++++... ......+.+|...
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~i-------------wd~~~~~~~----------------~~~~~~~~~h~~~------ 206 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKI-------------WKYNSDAQT----------------YVLESTLEGHSDW------ 206 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEE-------------EEEETTTTE----------------EEEEEEECCCSSC------
T ss_pred cccccCCCCCEEEEEECCCeEEE-------------EeccCCccc----------------ceeeeeecCCCCc------
Confidence 5899999999999999 999876430 0013333444443
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
| .+++|+|++. .++ ++++|+.||.|+
T Consensus 207 -V---------------------------~~l~~sp~~~---------------------~~~-----~l~s~s~Dg~I~ 232 (753)
T 3jro_A 207 -V---------------------------RDVAWSPTVL---------------------LRS-----YLASVSQDRTCI 232 (753)
T ss_dssp -E---------------------------EEEEECCCCS---------------------SSE-----EEEEEESSSCEE
T ss_pred -E---------------------------EEEEeccCCC---------------------CCC-----EEEEEecCCEEE
Confidence 3 4445554410 034 999999999999
Q ss_pred EEECCCCe-----EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 306 FWDLEKFS-----LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 306 IWDl~s~~-----~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+||+.++. .+.....|...|++++|+|+|++|++|+.|| |++|++.++
T Consensus 233 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred EecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 99998864 2333445888999999999999999999999 999999853
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-28 Score=274.59 Aligned_cols=258 Identities=16% Similarity=0.249 Sum_probs=200.9
Q ss_pred eEEeccCC------------CcEEEEEEecCCC--CEEEEEeCCCeEEEEECCCCeeE----------------------
Q psy467 8 AEDFMAHG------------ASVNCLALGKKSG--QVLATGGDDKKVNLWALGKSNCI---------------------- 51 (845)
Q Consensus 8 l~~L~gH~------------~~V~~LafSp~dg--~~LaTgs~DG~I~IWdl~t~~~i---------------------- 51 (845)
+..+.+|. +.|++++|+| ++ .+|++++.|+.|++|++.++...
T Consensus 74 ~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~-~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 152 (447)
T 3dw8_B 74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLP-QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTL 152 (447)
T ss_dssp EEEEECCCCEEEGGGTEEECCCCCEEEECC-CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSC
T ss_pred ecccccccccccccccccccCceEEEEEcC-CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccce
Confidence 45788998 8899999999 66 79999999999999998764432
Q ss_pred -----------------EE-ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CcEEEE-------EcCCCCCeEE
Q psy467 52 -----------------MS-LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV-PTVQRT-------LNGHKSSITS 105 (845)
Q Consensus 52 -----------------~~-l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t-g~~v~~-------l~~h~~~V~~ 105 (845)
.. ..+|...|.+++|+|++++|++| .|+.|++||+.+ ++.+.. +.+|...|.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 231 (447)
T 3dw8_B 153 RVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITA 231 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEE
T ss_pred EeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEE
Confidence 12 36799999999999999999999 799999999994 444442 4579999999
Q ss_pred EEEccCC-CEEEEEECCCeEEEEECCCCce----EEEEcCCCC------------CeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 106 VDFHPYG-DYLCSGSLDSFIKLWDLRRKGC----IYTYRGHSK------------SINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 106 lafspdg-~~Lasgs~DG~I~IWDl~t~~~----l~~~~~h~~------------~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
++|+|++ ++|++|+.||.|++||+++++. +..+..|.. .|.+++|+|++++|++++. +.|++
T Consensus 232 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~i 310 (447)
T 3dw8_B 232 AEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKV 310 (447)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEE
T ss_pred EEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEE
Confidence 9999998 9999999999999999998886 788888776 8999999999999999999 99999
Q ss_pred eeeeccCCceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 169 GASFHLTNTSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
||+++ ++. +..+.+|... + ..+..
T Consensus 311 -------------wd~~~~~~~--------------------~~~~~~~~~~-------~---------------~~l~~ 335 (447)
T 3dw8_B 311 -------------WDLNMENRP--------------------VETYQVHEYL-------R---------------SKLCS 335 (447)
T ss_dssp -------------EETTCCSSC--------------------SCCEESCGGG-------T---------------TTHHH
T ss_pred -------------EeCCCCccc--------------------cceeeccccc-------c---------------ccccc
Confidence 99986 555 3334443221 0 00000
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC-------
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK------- 320 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g------- 320 (845)
.. ..+ ....+..++|+|+++ +|++|+.||.|++||+.+++.+. +.+
T Consensus 336 ~~----------~~~-----------~i~~~~~~~~s~~~~-----~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~ 388 (447)
T 3dw8_B 336 LY----------END-----------CIFDKFECCWNGSDS-----VVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKP 388 (447)
T ss_dssp HH----------HTS-----------GGGCCCCEEECTTSS-----EEEEECSTTEEEEEETTTCCEEE-EECCSTTCCT
T ss_pred cc----------ccc-----------ccccceEEEECCCCC-----EEEEeccCCEEEEEEcCCCccee-eeeccccccc
Confidence 00 000 001123456666665 89999999999999999987763 222
Q ss_pred --------------------------CCCCEEEEEEeCCCCEEEEEeCCCEEEEEe
Q psy467 321 --------------------------NSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350 (845)
Q Consensus 321 --------------------------h~~~VtslafSpdG~~Lasgs~DGI~IWDl 350 (845)
+...|.+++|+|+|.+||+++.+++++|.-
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 389 RTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp TCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred ccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeeecc
Confidence 235688999999999999999999888874
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=274.46 Aligned_cols=248 Identities=24% Similarity=0.416 Sum_probs=214.0
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
++++|+ +..+.+|.+.|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|++ .+|++
T Consensus 154 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s 228 (435)
T 1p22_A 154 TIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVT 228 (435)
T ss_dssp CEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEE
T ss_pred eEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEE
Confidence 367776 4578899999999999 578999999999999999999999999999999999999974 59999
Q ss_pred EECCCcEEEEECCCCcEE---EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 76 GCQSGSIKIWNLAVPTVQ---RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v---~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
|+.||.|++||+.++... ..+.+|...|.+++| +++++++|+.||.|++||+++++.+..+.+|...|.+++|+
T Consensus 229 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~- 305 (435)
T 1p22_A 229 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR- 305 (435)
T ss_dssp EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE-
T ss_pred eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC-
Confidence 999999999999987654 677889999999999 68899999999999999999999999999999999999995
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++++++|+.||.|++ ||+++++. +..+.+|... +
T Consensus 306 -~~~l~~g~~dg~i~i-------------wd~~~~~~--------------------~~~~~~h~~~-------v----- 339 (435)
T 1p22_A 306 -DRLVVSGSSDNTIRL-------------WDIECGAC--------------------LRVLEGHEEL-------V----- 339 (435)
T ss_dssp -TTEEEEEETTSCEEE-------------EETTTCCE--------------------EEEECCCSSC-------E-----
T ss_pred -CCEEEEEeCCCeEEE-------------EECCCCCE--------------------EEEEeCCcCc-------E-----
Confidence 789999999999999 99998887 7777776665 5
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
.++.| ++. +|++|+.||.|++||+.++
T Consensus 340 ----------------------~~~~~--~~~-----------------------------~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 340 ----------------------RCIRF--DNK-----------------------------RIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp ----------------------EEEEC--CSS-----------------------------EEEEEETTSCEEEEEHHHH
T ss_pred ----------------------EEEEe--cCC-----------------------------EEEEEeCCCcEEEEECCCC
Confidence 55555 444 8999999999999999766
Q ss_pred e---------EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEE
Q psy467 313 S---------LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDA 358 (845)
Q Consensus 313 ~---------~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~t 358 (845)
. ++..+.+|.+.|++++| ++.+|++|+.|| |++||+.+......
T Consensus 367 ~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 367 LDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp TSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred CCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 5 88999999999999999 788999999999 99999988755433
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=275.81 Aligned_cols=248 Identities=16% Similarity=0.139 Sum_probs=183.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEE-----EecCCCCCeEEEEEcC--------CCCEEEEEECCCcEEEEECCCCcEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIM-----SLSGHSTPVESVQFGN--------GEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~-----~l~~h~~~V~sLafSp--------dg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
++.+||+++.|++|+|||..+++... .+.+|.+.|++++|+| |+++||+|+.|++|+|||+.++..+
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 56689999999999999998876543 3578999999999998 7899999999999999999988888
Q ss_pred EEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEE-------------------------cCCCCCeEE
Q psy467 94 RTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTY-------------------------RGHSKSINS 147 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~-------------------------~~h~~~V~s 147 (845)
..+..|...|.+++|+|++ .+|++++.||+|++||+++++..... .+|...+.+
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~ 259 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLAN 259 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSE
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccccee
Confidence 8888899999999999987 47999999999999999877543322 356778889
Q ss_pred EEEe-cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceee
Q psy467 148 IRFS-PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 148 LafS-Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
+.|+ +|++.+++++.|+.+++ ||+..+.. ...+..+...
T Consensus 260 v~~~~~dg~~l~s~s~d~~i~v-------------wd~~~~~~--------------------~~~l~~~~~~------- 299 (393)
T 4gq1_A 260 VRWIGSDGSGILAMCKSGAWLR-------------WNLFANND--------------------YNEISDSTMK------- 299 (393)
T ss_dssp EEEETTTTCEEEEECTTSEEEE-------------EEC------------------------------------------
T ss_pred eeeecCCCCEEEEEeCCCCEEE-------------EECccCCC--------------------CceEeeecCc-------
Confidence 9987 79999999999999999 99988766 2222222222
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC-CCCcccceEEEEEeCCCeEE
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP-QSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP-dg~~~~~~lLatgs~DG~I~ 305 (845)
+ ..+.+.++... ...........|+| .+.. ++++|+.||.|+
T Consensus 300 ~---------------------------~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~----~~~sgs~Dg~V~ 342 (393)
T 4gq1_A 300 L---------------------------GPKNLLPNVQG------ISLFPSLLGACPHPRYMDY----FATAHSQHGLIQ 342 (393)
T ss_dssp -------------------------------CCSCSEEE------ECSSCCSSCCEECSSCTTE----EEEEETTTTEEE
T ss_pred c---------------------------ccEEEcccccc------ccccCcceeEEEccCCCCE----EEEEECCCCEEE
Confidence 2 11122222110 00001112223333 2221 678888999999
Q ss_pred EEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEec
Q psy467 306 FWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~ 351 (845)
+||+.+++++..+.+|..+|++++|||||++||+++.+|+.+|.+.
T Consensus 343 lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 343 LINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp EEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred EEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 9999999988888889999999999999999999999998887764
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-26 Score=260.54 Aligned_cols=279 Identities=10% Similarity=0.092 Sum_probs=230.6
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEE-----EecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM-----SLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~-----~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
..+..+ ..+.+++|+| ++.++++++.++.|++||+.+++... .+.+|...|.+++|++++.++++++.|+.|+
T Consensus 117 ~~~~~~-~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 117 SRFKTG-FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVH 194 (433)
T ss_dssp EEEECS-SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEE
T ss_pred EEEcCC-CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEE
Confidence 344444 4567999999 88899999999999999999998887 3457899999999999999999999999999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG- 161 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs- 161 (845)
+||+++++.+..+..|...+.+++|+|+++++++++ .|+.|++||+++++.+..+.. ...+.+++|+|+++++++++
T Consensus 195 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 195 VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEE
T ss_pred EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEEC
Confidence 999999999999988999999999999999886555 799999999999988888775 45699999999999999887
Q ss_pred -------CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 162 -------EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 162 -------~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
.|+.|++ ||+.+++. +..+. +... +
T Consensus 274 ~~~~~~~~dg~i~~-------------~d~~~~~~--------------------~~~~~-~~~~-------~------- 305 (433)
T 3bws_A 274 SASNQESGGGRLGI-------------YSMDKEKL--------------------IDTIG-PPGN-------K------- 305 (433)
T ss_dssp ESCTTCSCCEEEEE-------------EETTTTEE--------------------EEEEE-EEEC-------E-------
T ss_pred CCCccccCCCeEEE-------------EECCCCcE--------------------Eeecc-CCCC-------c-------
Confidence 4778888 99987765 32221 1111 2
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
..++|+|++. . ++++++.|+.|++||+.+++.
T Consensus 306 --------------------~~~~~~~~g~------------------------~----l~~~~~~~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 306 --------------------RHIVSGNTEN------------------------K----IYVSDMCCSKIEVYDLKEKKV 337 (433)
T ss_dssp --------------------EEEEECSSTT------------------------E----EEEEETTTTEEEEEETTTTEE
T ss_pred --------------------ceEEECCCCC------------------------E----EEEEecCCCEEEEEECCCCcE
Confidence 3445555543 1 567778999999999999998
Q ss_pred EEEecCCCCCEEEEEEeCCCCEEEEEeC---------------CC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceE
Q psy467 315 VSTTEKNSSTIRRLTFSEGGECLLGGDT---------------EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLW 377 (845)
Q Consensus 315 l~tl~gh~~~VtslafSpdG~~Lasgs~---------------DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lL 377 (845)
+..+. +...+.+++|+|+|++|++++. || |++||+.+++.+..+.. ...+.+++|+ +|++|
T Consensus 338 ~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l 415 (433)
T 3bws_A 338 QKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYL 415 (433)
T ss_dssp EEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEE
T ss_pred EEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEE
Confidence 88876 5678999999999999998876 57 99999999998888876 4679999999 88888
Q ss_pred EEE------EEEEeeCC
Q psy467 378 FRR------VGTWSHQD 388 (845)
Q Consensus 378 aaS------VsiW~~d~ 388 (845)
+++ +.+|.+++
T Consensus 416 ~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 416 VISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEETTTTEEEEEEETT
T ss_pred EEEECCCCeEEEEEecC
Confidence 766 88997753
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-27 Score=255.04 Aligned_cols=242 Identities=14% Similarity=0.164 Sum_probs=204.6
Q ss_pred eEEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEEC-CCCeeEEEecC--CCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWAL-GKSNCIMSLSG--HSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl-~t~~~i~~l~~--h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
+..+.+|...|.+++|+| +++ +|++|+.||.|++|++ .+++. ..+.+ |...|.+++|+| +++|++++.|+.|+
T Consensus 49 ~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIE 125 (342)
T ss_dssp EEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEE
T ss_pred ceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEE
Confidence 455678999999999999 899 9999999999999999 77654 77888 999999999999 99999999999999
Q ss_pred EEECCC---------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-Cc--eEEEEcCCCCCeEEEEEe
Q psy467 84 IWNLAV---------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KG--CIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 84 VWDl~t---------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~--~l~~~~~h~~~V~sLafS 151 (845)
+||+.+ ++.+..+. |...|.+++|++++ +++++.|+.|++||+++ +. .......|...+.+++|+
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~ 202 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL 202 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC
T ss_pred EEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC
Confidence 999987 66666666 88999999999887 99999999999999987 54 334455688899999999
Q ss_pred c-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC------ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 152 P-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV------HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 152 P-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg------~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
| +++++++++.||.+++ |++... +. ...+..|...
T Consensus 203 ~~~~~~l~~~~~dg~i~i-------------~~~~~~~~~~~~~~--------------------~~~~~~~~~~----- 244 (342)
T 1yfq_A 203 PKEQEGYACSSIDGRVAV-------------EFFDDQGDDYNSSK--------------------RFAFRCHRLN----- 244 (342)
T ss_dssp SGGGCEEEEEETTSEEEE-------------EECCTTCCSTTCTT--------------------CEEEECCCCC-----
T ss_pred CCCCCEEEEEecCCcEEE-------------EEEcCCCccccccc--------------------ceeeeccccc-----
Confidence 9 9999999999999999 999876 22 3444444321
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
. .+ ..+...|.+++|+|+++ +|++|+.||.|
T Consensus 245 --~----------------------------------~~--------~~~~~~i~~~~~s~~~~-----~l~~~~~dg~i 275 (342)
T 1yfq_A 245 --L----------------------------------KD--------TNLAYPVNSIEFSPRHK-----FLYTAGSDGII 275 (342)
T ss_dssp --T----------------------------------TC--------CSSCCCEEEEEECTTTC-----CEEEEETTSCE
T ss_pred --c----------------------------------cc--------cccceeEEEEEEcCCCC-----EEEEecCCceE
Confidence 0 00 01234566677777776 89999999999
Q ss_pred EEEECCCCeEEEEecCC-CCCEEEEEEeCCCCEEEEEeCCC
Q psy467 305 NFWDLEKFSLVSTTEKN-SSTIRRLTFSEGGECLLGGDTEG 344 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh-~~~VtslafSpdG~~Lasgs~DG 344 (845)
++||+.+++++..+.+| ...|++++ |+|++|++++.|+
T Consensus 276 ~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 276 SCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred EEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 99999999999999998 99999999 9999999999998
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-26 Score=255.32 Aligned_cols=285 Identities=11% Similarity=0.045 Sum_probs=203.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEE-EEEECCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL-SAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~L-aSgs~DGtV~VWD 86 (845)
++++.+|.+.|+|++|+| +|++||+|+.++ ++||+..+++.......+ .+..+++.++++.+ ++++.|++|++||
T Consensus 12 ~~~~~~h~~~V~~v~fs~-dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQ-DQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp -------CCCCCEEEECT-TSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred ccccccCCCceEEEEECC-CCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 446789999999999999 999999998775 789999887766654432 58888999988887 4567789999999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecCCCEEEE--EeCC
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIAS--GGED 163 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPdg~~Las--gs~D 163 (845)
+.+++.+..+. +...|.+++|+++. ++++ .|+.|++||+.++ +.+..+.. ....+++++ .++++ |+.|
T Consensus 88 ~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~ 158 (355)
T 3vu4_A 88 DVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNL 158 (355)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCT
T ss_pred CCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcC
Confidence 99999999887 66789999998764 4444 4789999999987 66655543 445567776 66666 5789
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe-EEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL-RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~-l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
|.|++ ||+.++......... ..... -.. +..+.+|
T Consensus 159 g~v~i-------------wd~~~~~~~~~~~~~-~~~~~----~~p~~~~~~~h-------------------------- 194 (355)
T 3vu4_A 159 GQIHI-------------TKLQSSGSATTQDQG-VQQKA----ILGKGVLIKAH-------------------------- 194 (355)
T ss_dssp TCEEE-------------EECCC-----------------------CCEEECCC--------------------------
T ss_pred cEEEE-------------EECCCCCcccccccc-ccccc----cCcccEEEEcc--------------------------
Confidence 99999 999876641100000 00000 000 1122222
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCe-EEEEECCCCeEEEEec-C
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT-VNFWDLEKFSLVSTTE-K 320 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~-I~IWDl~s~~~l~tl~-g 320 (845)
...|++++|+|+|+ +|++|+.|++ |++||+.+++++.++. +
T Consensus 195 --------------------------------~~~v~~~~~s~~g~-----~l~s~s~d~~~v~iwd~~~~~~~~~~~~g 237 (355)
T 3vu4_A 195 --------------------------------TNPIKMVRLNRKSD-----MVATCSQDGTIIRVFKTEDGVLVREFRRG 237 (355)
T ss_dssp --------------------------------SSCEEEEEECTTSS-----EEEEEETTCSEEEEEETTTCCEEEEEECT
T ss_pred --------------------------------CCceEEEEECCCCC-----EEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 34566666666666 9999999998 9999999999999998 5
Q ss_pred -CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceE--EEec---------------------CCCCCeEEEEEc-CC
Q psy467 321 -NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQY--DAQP---------------------MGWGKVQDLAVT-GT 374 (845)
Q Consensus 321 -h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l--~tl~---------------------~h~~~VtsVafS-dg 374 (845)
|...|++++|+|+|++|++++.|+ |+|||+..+... ..+. .+......++|+ ++
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~ 317 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISES 317 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSS
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCC
Confidence 999999999999999999999999 999999765311 1111 112234678999 88
Q ss_pred ceEEEE-----EEEEee
Q psy467 375 QLWFRR-----VGTWSH 386 (845)
Q Consensus 375 ~lLaaS-----VsiW~~ 386 (845)
+.|+++ +.+|.+
T Consensus 318 ~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 318 SLVVVWPHTRMIETFKV 334 (355)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred CEEEEEeCCCeEEEEEE
Confidence 888887 777754
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-26 Score=263.16 Aligned_cols=283 Identities=17% Similarity=0.217 Sum_probs=223.6
Q ss_pred CcEEEEEEecCCC---------CEEEEEeC----CCeEEEEECC--------------------------CCee-EEEec
Q psy467 16 ASVNCLALGKKSG---------QVLATGGD----DKKVNLWALG--------------------------KSNC-IMSLS 55 (845)
Q Consensus 16 ~~V~~LafSp~dg---------~~LaTgs~----DG~I~IWdl~--------------------------t~~~-i~~l~ 55 (845)
-+..|+.|.|+.. .++++|+. ...|.++++. +++. .....
T Consensus 46 wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 125 (430)
T 2xyi_A 46 WPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKI 125 (430)
T ss_dssp SCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEE
T ss_pred CCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEE
Confidence 3678899988321 46777754 3467777532 1111 24455
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEECCCcEEEEECCC----------CcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCe
Q psy467 56 GHSTPVESVQFGNG-EETLSAGCQSGSIKIWNLAV----------PTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSF 123 (845)
Q Consensus 56 ~h~~~V~sLafSpd-g~~LaSgs~DGtV~VWDl~t----------g~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~ 123 (845)
.|.+.|++++|+|+ +.+|++++.+|.|++||+.+ ...+..+.+|...|.+++|+|++. +|++|+.||.
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 205 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHT 205 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSC
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCe
Confidence 69999999999997 78999999999999999986 567788889999999999999988 9999999999
Q ss_pred EEEEECCCCce-------EEEEcCCCCCeEEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCC
Q psy467 124 IKLWDLRRKGC-------IYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP 195 (845)
Q Consensus 124 I~IWDl~t~~~-------l~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~ 195 (845)
|++||+.++.. ...+..|...|.+++|+| ++.+|++++.||.|++ ||++++...
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i-------------~d~~~~~~~----- 267 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMI-------------WDTRNNNTS----- 267 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEE-------------EETTCSCSS-----
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEE-------------EECCCCCCC-----
Confidence 99999987322 456778999999999999 7789999999999999 999876420
Q ss_pred CCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccc
Q psy467 196 QYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVS 275 (845)
Q Consensus 196 ~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~ 275 (845)
..+..+..|... + .+++|+|++
T Consensus 268 ------------~~~~~~~~~~~~-------v---------------------------~~i~~~p~~------------ 289 (430)
T 2xyi_A 268 ------------KPSHTVDAHTAE-------V---------------------------NCLSFNPYS------------ 289 (430)
T ss_dssp ------------SCSEEEECCSSC-------E---------------------------EEEEECSSC------------
T ss_pred ------------cceeEeecCCCC-------e---------------------------EEEEeCCCC------------
Confidence 003333344433 3 445555544
Q ss_pred cCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-CeEEEEecCCCCCEEEEEEeCCCC-EEEEEeCCC-EEEEEecC
Q psy467 276 VSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGGE-CLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 276 ~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~~~l~tl~gh~~~VtslafSpdG~-~Lasgs~DG-I~IWDl~t 352 (845)
+. ++++|+.||.|++||+++ ..++..+.+|...|++++|+|+++ +|++++.|+ |+|||+..
T Consensus 290 ------------~~----~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 290 ------------EF----ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ------------TT----EEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred ------------CC----EEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 32 799999999999999998 567888999999999999999985 689999999 99999987
Q ss_pred --------------CceEEEecCCCCCeEEEEEc-CCc-eEEEE-----EEEEeeCCCC
Q psy467 353 --------------ARQYDAQPMGWGKVQDLAVT-GTQ-LWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 353 --------------gk~l~tl~~h~~~VtsVafS-dg~-lLaaS-----VsiW~~d~~~ 390 (845)
.+.+..+.+|...|++++|+ ++. +++++ |.+|.++...
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 354 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp TTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred CccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 36778888999999999999 777 55555 8999876443
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=260.41 Aligned_cols=226 Identities=13% Similarity=0.121 Sum_probs=182.8
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC---------CCcEEEEEc
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA---------VPTVQRTLN 97 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~---------tg~~v~~l~ 97 (845)
++.+|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+.
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 67899999999999999999999888876 467888889988 9999999999999665 555454443
Q ss_pred -CCCCCeEEEEEcc--CCCEEEEEECCCeEEEEECCCCceEEEEcC-CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 98 -GHKSSITSVDFHP--YGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 98 -~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
.|...|.+++|+| ++++|++++.||.|++||+++++++..... +...+.+++|+|++.+|++|+.||.|++
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i----- 196 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV----- 196 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE-----
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE-----
Confidence 6778899999999 999999999999999999999988776643 5558999999999999999999999999
Q ss_pred cCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeE-EEEec-CCCCCccceeeEeeecccccccccccchhhhhhccC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR-KSFTK-GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIAN 251 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l-~~~~~-h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~ 251 (845)
||+++++. + ..+.. |... |
T Consensus 197 --------wd~~~~~~--------------------~~~~~~~~h~~~-------v------------------------ 217 (343)
T 3lrv_A 197 --------YNLSSPDQ--------------------ASSRFPVDEEAK-------I------------------------ 217 (343)
T ss_dssp --------EESSCTTS--------------------CCEECCCCTTSC-------E------------------------
T ss_pred --------EECCCCCC--------------------CccEEeccCCCC-------E------------------------
Confidence 99998876 3 34444 4444 4
Q ss_pred CCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC---CCCCEE--
Q psy467 252 PCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK---NSSTIR-- 326 (845)
Q Consensus 252 ~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g---h~~~Vt-- 326 (845)
.+++|+|++. +|++++ |+.|++||+++++.+..+.. |...+.
T Consensus 218 ---~~l~fs~~g~-----------------------------~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T 3lrv_A 218 ---KEVKFADNGY-----------------------------WMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTV 264 (343)
T ss_dssp ---EEEEECTTSS-----------------------------EEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCE
T ss_pred ---EEEEEeCCCC-----------------------------EEEEEe-CCeEEEEEcCCCCcceeecccccccccccce
Confidence 5555655555 899999 55999999998876555443 333444
Q ss_pred EEEEeCCCCEEEEEeC-CC-EEEEEecCCc
Q psy467 327 RLTFSEGGECLLGGDT-EG-LKVYGWEPAR 354 (845)
Q Consensus 327 slafSpdG~~Lasgs~-DG-I~IWDl~tgk 354 (845)
+++|+|+|++|++++. |+ |+||+++...
T Consensus 265 ~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 265 TYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 6999999999999998 88 9999997653
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-27 Score=271.03 Aligned_cols=269 Identities=10% Similarity=0.105 Sum_probs=206.7
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEE-----------------E----------EECCCCeeEEEec-CCCCCeEE
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVN-----------------L----------WALGKSNCIMSLS-GHSTPVES 63 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~-----------------I----------Wdl~t~~~i~~l~-~h~~~V~s 63 (845)
+.....|.+++|+| ||+++|+++.|++|+ + |++.+++....+. .|...|.+
T Consensus 12 ~~~~~~v~sv~~Sp-DG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~ 90 (588)
T 2j04_A 12 KEFEDWKNNLTWAR-DGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRV 90 (588)
T ss_dssp CCCSSSSCCEEECT-TSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEE
T ss_pred hHhhccEEEEEECC-CCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEE
Confidence 34568899999999 999999999999994 1 2222222111222 46788999
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCC-----CeEEEEEccCCCEEEEEECCCeEEEEECCCCc-----
Q psy467 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS-----SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG----- 133 (845)
Q Consensus 64 LafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~-----~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~----- 133 (845)
++|||+|++||+++.||.|++||.++ ++..+. |.. .|.+++|||||++|++|+.||+|++||+.++.
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence 99999999999999999999999654 666677 665 49999999999999999999999999999875
Q ss_pred --eEEEE----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCC
Q psy467 134 --CIYTY----RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNT 207 (845)
Q Consensus 134 --~l~~~----~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg 207 (845)
.+.++ .+|...|.+++|+||| +++++.|+.+++ ||+..+....
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrl-------------Wd~~~~~~~~---------------- 216 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFS-------------MTVSASSHQP---------------- 216 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEE-------------ECCCSSSSCC----------------
T ss_pred ceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEE-------------EECCCCcccc----------------
Confidence 35676 5677899999999999 888999999999 9998766400
Q ss_pred CeEEEEe-cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 208 SLRKSFT-KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 208 ~~l~~~~-~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
....+. +|... | ..++|+ +.
T Consensus 217 -~~~tL~~~h~~~-------V---------------------------~svaFs--g~---------------------- 237 (588)
T 2j04_A 217 -VSRMIQNASRRK-------I---------------------------TDLKIV--DY---------------------- 237 (588)
T ss_dssp -CEEEEECCCSSC-------C---------------------------CCEEEE--TT----------------------
T ss_pred -ceeeecccccCc-------E---------------------------EEEEEE--CC----------------------
Confidence 023332 34333 4 555555 34
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEE--eCCCCEEEEEeCCCEEEEEecC------C-----
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTF--SEGGECLLGGDTEGLKVYGWEP------A----- 353 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtslaf--SpdG~~Lasgs~DGI~IWDl~t------g----- 353 (845)
.+|+++ ++.|++||+.+++......+|...|..++| +||+..|++++.+|.++|..+. +
T Consensus 238 -------~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~~d~~~~spd~~l~a~ 309 (588)
T 2j04_A 238 -------KVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLLEDELHVTADNIIAPY 309 (588)
T ss_dssp -------EEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEESSSEEEECCCSSHHH
T ss_pred -------EEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEeeccEEECCCceEEEE
Confidence 788887 699999999988875444489999999999 9999999999988878888631 1
Q ss_pred ------------ceEEEecCCCCCeEEEEEc-CCceEEEEEEE
Q psy467 354 ------------RQYDAQPMGWGKVQDLAVT-GTQLWFRRVGT 383 (845)
Q Consensus 354 ------------k~l~tl~~h~~~VtsVafS-dg~lLaaSVsi 383 (845)
..+..+.+ ...|.+++|| ||+.+|++-.+
T Consensus 310 ~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~~i 351 (588)
T 2j04_A 310 LEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIAIVYDM 351 (588)
T ss_dssp HHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEEEEEEE
T ss_pred cCCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEEEEEec
Confidence 11122222 3459999999 99999888444
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-25 Score=244.42 Aligned_cols=257 Identities=14% Similarity=0.145 Sum_probs=212.3
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEE-EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL-SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVD 107 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~L-aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~la 107 (845)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.++.|++||+.+++.+..+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 468888999999999999999999988765 58999999999987 566689999999999999998888555 899999
Q ss_pred EccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE-EEEeCCCcEEEeeeeccCCceeEEEECC
Q psy467 108 FHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI-ASGGEDGVVRIGASFHLTNTSIHVVDLS 185 (845)
Q Consensus 108 fspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L-asgs~DG~I~I~~~~~~~~~~I~vWDl~ 185 (845)
|+|++++|++++ .++.|++||+.+++.+..+.. ...+.+++|+|+++++ ++++.++.|++ ||+.
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~-------------~d~~ 146 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSV-------------INTV 146 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEE-------------EETT
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEE-------------EECC
Confidence 999999886555 679999999999998888874 4568999999999987 67778999999 9998
Q ss_pred CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCc
Q psy467 186 LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSL 265 (845)
Q Consensus 186 tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~ 265 (845)
+++. +..+..+.. + ..++|+|++.
T Consensus 147 ~~~~--------------------~~~~~~~~~--------~---------------------------~~~~~~~dg~- 170 (391)
T 1l0q_A 147 TKAV--------------------INTVSVGRS--------P---------------------------KGIAVTPDGT- 170 (391)
T ss_dssp TTEE--------------------EEEEECCSS--------E---------------------------EEEEECTTSS-
T ss_pred CCcE--------------------EEEEecCCC--------c---------------------------ceEEECCCCC-
Confidence 8776 444333221 1 4455555554
Q ss_pred CCCCcccccccCceeEEEcCCCCcccceEE-EEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEe---
Q psy467 266 NRSGTCVPVSVSRTSLSILPQSPMLCFILT-TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGD--- 341 (845)
Q Consensus 266 ~~~~~~~~~~~~I~slafSPdg~~~~~~lL-atgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs--- 341 (845)
.+ ++++.++.|++||+.+++.+..+.. ...+.+++|+|+|++|++++
T Consensus 171 ----------------------------~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~ 221 (391)
T 1l0q_A 171 ----------------------------KVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDK 221 (391)
T ss_dssp ----------------------------EEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECS
T ss_pred ----------------------------EEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEecCc
Confidence 55 6778899999999999988887764 56799999999999999888
Q ss_pred CCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE------EEEEeeC
Q psy467 342 TEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR------VGTWSHQ 387 (845)
Q Consensus 342 ~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS------VsiW~~d 387 (845)
.++ |++||+.+++.+..+..|. .+.+++|+ ++++++++ +.+|...
T Consensus 222 ~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp SCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 577 9999999999888888765 58899999 88877544 8899765
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-26 Score=259.10 Aligned_cols=269 Identities=13% Similarity=0.107 Sum_probs=207.6
Q ss_pred EeccCCCcEEEEEEecCCCCEE-EEEeCCCeEEEEECC--CCeeEEEec--CCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 10 DFMAHGASVNCLALGKKSGQVL-ATGGDDKKVNLWALG--KSNCIMSLS--GHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~L-aTgs~DG~I~IWdl~--t~~~i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
...+|.+.|++++|+| ++++| ++|+.||.|+||++. +++.+..+. .|...|.+++|+|++++|++|+.+|.|++
T Consensus 97 ~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp ---CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 3457888999999999 88886 899999999999998 888888876 57789999999999999999999999999
Q ss_pred EECCCCcEEE----EEcCCCCCeEEEEEccC---CCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCE
Q psy467 85 WNLAVPTVQR----TLNGHKSSITSVDFHPY---GDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 85 WDl~tg~~v~----~l~~h~~~V~~lafspd---g~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~ 156 (845)
|++.++.... .+.+|...|.+++|+|+ +++|++|+.|+.|++||+.++.++.. +.+|...|.+++|+ ++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~ 254 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYL 254 (450)
T ss_dssp EETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTE
T ss_pred EecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCE
Confidence 9998876543 66779999999999999 99999999999999999999988877 55899999999999 9999
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
|++++.|+.|++ ||+.+++. +..+..+... .. +
T Consensus 255 l~s~~~d~~v~v-------------wd~~~~~~--------------------~~~~~~~~~~---~~--~--------- 287 (450)
T 2vdu_B 255 LLSAGGDDKIFA-------------WDWKTGKN--------------------LSTFDYNSLI---KP--Y--------- 287 (450)
T ss_dssp EEEEESSSEEEE-------------EETTTCCE--------------------EEEEECHHHH---GG--G---------
T ss_pred EEEEeCCCeEEE-------------EECCCCcE--------------------eeeecchhhh---hh--h---------
Confidence 999999999999 99998887 4444321100 00 0
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEEC--CCC-
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDL--EKF- 312 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl--~s~- 312 (845)
...... ....|..... ......+.+++|+|+++ ++++++ .|+.|++||+ .++
T Consensus 288 --------~~~~~~----~~~~~~~~~~-------~~~~~~v~~i~~~~~~~-----~l~~~~~~d~~i~iw~~~~~~~~ 343 (450)
T 2vdu_B 288 --------LNDQHL----APPRFQNENN-------DIIEFAVSKIIKSKNLP-----FVAFFVEATKCIIILEMSEKQKG 343 (450)
T ss_dssp --------CCTTSB----C-----------------CBCCCEEEEEECSSSS-----EEEEEETTCSEEEEEEECSSSTT
T ss_pred --------hhhccc----cccccccccc-------ccceEEEEEEEEeCCCC-----EEEEEECCCCeEEEEEeccCCCC
Confidence 000000 0000000000 01234577888888888 888888 8999999999 555
Q ss_pred --eEEEEecCCCCCEEEEEEeCCCCEEEEEeC------CC-EEEEEecC
Q psy467 313 --SLVSTTEKNSSTIRRLTFSEGGECLLGGDT------EG-LKVYGWEP 352 (845)
Q Consensus 313 --~~l~tl~gh~~~VtslafSpdG~~Lasgs~------DG-I~IWDl~t 352 (845)
+.+..+..| +.|.+++|+|++.++++++. +. |.+|.++.
T Consensus 344 ~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 344 DLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp CEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred ceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 778888887 88999999996544444443 34 88988764
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-26 Score=247.36 Aligned_cols=256 Identities=15% Similarity=0.214 Sum_probs=204.5
Q ss_pred ceeeee--------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEE--cCCCCE
Q psy467 3 AKVEKA--------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF--GNGEET 72 (845)
Q Consensus 3 irlw~l--------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLaf--Spdg~~ 72 (845)
+++|++ ..+.+|.+.|++++|+| ++++|++++.||.|++||+.+++.+. +..|...|.+++| ++++.+
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~ 143 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSC 143 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEE
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCE
Confidence 567764 56889999999999999 99999999999999999999988776 5569999999999 899999
Q ss_pred EEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEEEEE
Q psy467 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINSIRF 150 (845)
Q Consensus 73 LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~sLaf 150 (845)
|++++.||.|++||+.+++.+..+..+. .+.++.+. ...+++++.++.+.+|+++......... .+...+.++++
T Consensus 144 l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (368)
T 3mmy_A 144 VMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAI 220 (368)
T ss_dssp EEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEE
T ss_pred EEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEE
Confidence 9999999999999999999888888654 56666666 4588999999999999998765443332 24456677777
Q ss_pred ecCCCE----EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceee
Q psy467 151 SPDGQW----IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 151 SPdg~~----Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
.++... +++++.||.|++ ||+...... ..+..+.+|...
T Consensus 221 ~~~~~~~~~~~~~~~~dg~i~i-------------~~~~~~~~~-----------------~~~~~~~~~~~~------- 263 (368)
T 3mmy_A 221 FKDKQNKPTGFALGSIEGRVAI-------------HYINPPNPA-----------------KDNFTFKCHRSN------- 263 (368)
T ss_dssp EECTTSCEEEEEEEETTSEEEE-------------EESSCSCHH-----------------HHSEEEECSEEC-------
T ss_pred cccCCCCCCeEEEecCCCcEEE-------------EecCCCCcc-----------------ccceeeeeeecc-------
Confidence 766554 999999999999 999876320 003333333221
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEE
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNF 306 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~I 306 (845)
. . ......+...|++++|+|+++ +|++|+.||.|++
T Consensus 264 ~---------------------------~------------~~~~~~~~~~v~~~~~sp~~~-----~l~s~~~dg~i~i 299 (368)
T 3mmy_A 264 G---------------------------T------------NTSAPQDIYAVNGIAFHPVHG-----TLATVGSDGRFSF 299 (368)
T ss_dssp -------------------------------------------CCCEEECCEEEEEECTTTC-----CEEEEETTSCEEE
T ss_pred c---------------------------c------------cccccccccceEEEEEecCCC-----EEEEEccCCeEEE
Confidence 0 0 000112234577788888877 8999999999999
Q ss_pred EECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy467 307 WDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344 (845)
Q Consensus 307 WDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG 344 (845)
||+.+++++..+.+|...|++++|+|+|++|++++.|+
T Consensus 300 wd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 300 WDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp EETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred EECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 99999999999999999999999999999999999987
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-25 Score=242.28 Aligned_cols=260 Identities=12% Similarity=0.126 Sum_probs=209.9
Q ss_pred ceeeee------EEeccCCCcEEEEEEecCCCCEE-EEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 3 AKVEKA------EDFMAHGASVNCLALGKKSGQVL-ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 3 irlw~l------~~L~gH~~~V~~LafSp~dg~~L-aTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
+++|++ +.+.+|. .+.+++|+| +++++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+|++++|++
T Consensus 14 v~v~d~~~~~~~~~~~~~~-~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~ 90 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVGS-NPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYV 90 (391)
T ss_dssp EEEEETTTTEEEEEEECSS-SEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEE
T ss_pred EEEEECCCCeEEEEeecCC-CcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEE
Confidence 566763 4566664 599999999 88766 677789999999999999998888655 8999999999998865
Q ss_pred EE-CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE-EEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC
Q psy467 76 GC-QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153 (845)
Q Consensus 76 gs-~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L-asgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd 153 (845)
++ .++.|++||+.+++.+..+..+ ..+.+++|+|+++++ ++++.++.|++||+.+++.+..+..+ ..+.+++|+|+
T Consensus 91 ~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~d 168 (391)
T 1l0q_A 91 TNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPD 168 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTT
T ss_pred EECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCC
Confidence 54 5799999999999988888754 468999999999977 67778999999999999998888755 45799999999
Q ss_pred CCEE-EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 154 GQWI-ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 154 g~~L-asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++++ ++++.++.|++ ||+.+++. +..+..+ .. +
T Consensus 169 g~~l~~~~~~~~~v~~-------------~d~~~~~~--------------------~~~~~~~-~~-------~----- 202 (391)
T 1l0q_A 169 GTKVYVANFDSMSISV-------------IDTVTNSV--------------------IDTVKVE-AA-------P----- 202 (391)
T ss_dssp SSEEEEEETTTTEEEE-------------EETTTTEE--------------------EEEEECS-SE-------E-----
T ss_pred CCEEEEEeCCCCEEEE-------------EECCCCeE--------------------EEEEecC-CC-------c-----
Confidence 9987 56778899999 99987766 3333211 11 2
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe---CCCeEEEEEC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS---ADRTVNFWDL 309 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs---~DG~I~IWDl 309 (845)
..++|+|++. ++++++ .++.|++||+
T Consensus 203 ----------------------~~~~~~~~g~-----------------------------~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 203 ----------------------SGIAVNPEGT-----------------------------KAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp ----------------------EEEEECTTSS-----------------------------EEEEEEECSSCCEEEEEET
T ss_pred ----------------------cceEECCCCC-----------------------------EEEEEecCcCCCcEEEEEC
Confidence 4445555554 777776 6899999999
Q ss_pred CCCeEEEEecCCCCCEEEEEEeCCCCEE-EEEeCCC-EEEEEecCCceEEEecCCCCC
Q psy467 310 EKFSLVSTTEKNSSTIRRLTFSEGGECL-LGGDTEG-LKVYGWEPARQYDAQPMGWGK 365 (845)
Q Consensus 310 ~s~~~l~tl~gh~~~VtslafSpdG~~L-asgs~DG-I~IWDl~tgk~l~tl~~h~~~ 365 (845)
.+++.+..+..|. .+.+++|+|+|++| ++++.|+ |++||+.+++.+..+..|..+
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~ 288 (391)
T 1l0q_A 232 GTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNP 288 (391)
T ss_dssp TTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred CCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCC
Confidence 9999998888764 58999999999988 5667788 999999999998888776543
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.1e-27 Score=261.14 Aligned_cols=298 Identities=12% Similarity=0.106 Sum_probs=197.0
Q ss_pred CcEEEEEEe---cCCCCEEEEEeCCCeEEEEECCCC----------eeEEEecCCCCCeEEEEEc---------------
Q psy467 16 ASVNCLALG---KKSGQVLATGGDDKKVNLWALGKS----------NCIMSLSGHSTPVESVQFG--------------- 67 (845)
Q Consensus 16 ~~V~~LafS---p~dg~~LaTgs~DG~I~IWdl~t~----------~~i~~l~~h~~~V~sLafS--------------- 67 (845)
....++.|. ++..+++++|. ++.|.+|+.... ..+..+ .+...+..+.|+
T Consensus 16 ~~p~~~~w~~~~~~~~~l~a~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (393)
T 4gq1_A 16 VRPYTTTWCSQSPSCSNLLAIGH-DTGITIYCASEEQTPGSTGLTLQELFTI-QTGLPTLHLSFSSSCSYSENLHDGDGN 93 (393)
T ss_dssp CCEEEEEECTTSGGGTTEEEEEE-SSEEEEEEEEECCSSSCCSEEEEEEEEE-ECSSCEEEEEECTTCEEECC-------
T ss_pred CCCeEEEEeCCCCCCCCEEEEEC-CCCEEEEECCCCCcccccccceeeeEEE-ecCCCeeeEeecCCccccccccCCCcc
Confidence 445667774 43445666654 778999975211 111112 244445555544
Q ss_pred -----CCCCEEEEEECCCcEEEEECCCCcEEE-----EEcCCCCCeEEEEEcc--------CCCEEEEEECCCeEEEEEC
Q psy467 68 -----NGEETLSAGCQSGSIKIWNLAVPTVQR-----TLNGHKSSITSVDFHP--------YGDYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 68 -----pdg~~LaSgs~DGtV~VWDl~tg~~v~-----~l~~h~~~V~~lafsp--------dg~~Lasgs~DG~I~IWDl 129 (845)
+++.+|++++.|++|++||++++.... .+.+|.+.|++++|+| |+++|++|+.|++|++||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 455689999999999999999886543 3578999999999998 7899999999999999999
Q ss_pred CCCceEEEEcCCCCCeEEEEEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 130 RRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 130 ~t~~~l~~~~~h~~~V~sLafSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
.++.++..+..|...+.+++|+|++ ++|++++.|+.|++ ||+++++.....
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~-------------wd~~t~~~~~~~--------------- 225 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRI-------------FDWTLNLSAEEN--------------- 225 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEE-------------EETTCCC--------------------
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEE-------------EECCCCcccccc---------------
Confidence 9888888888899999999999987 47999999999999 999988762211
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEc-CCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSIL-PQS 287 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafS-Pdg 287 (845)
..+...... ..+.+..... ........+...+.+++|+ +|+
T Consensus 226 -----~~~~~~~~~--------------------------------~~~s~~~~~~-~~~~~~~~~~~~v~~v~~~~~dg 267 (393)
T 4gq1_A 226 -----SQTELVKNP--------------------------------WLLTLNTLPL-VNTCHSSGIASSLANVRWIGSDG 267 (393)
T ss_dssp ----------CSCC--------------------------------CSEEEESGGG-C------CCSSSCSEEEEETTTT
T ss_pred -----cccCCcccc--------------------------------eEEecccccc-eeeeecccccccceeeeeecCCC
Confidence 111111000 0011111000 0000111234556777775 677
Q ss_pred CcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeC--------------------CCCEEEEEeCCC-EE
Q psy467 288 PMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE--------------------GGECLLGGDTEG-LK 346 (845)
Q Consensus 288 ~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp--------------------dG~~Lasgs~DG-I~ 346 (845)
+ .+++++.|+.+++||+..+.....+..|...+..+.++| ++.++++|+.|+ |+
T Consensus 268 ~-----~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~ 342 (393)
T 4gq1_A 268 S-----GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQ 342 (393)
T ss_dssp C-----EEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEE
T ss_pred C-----EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEE
Confidence 7 899999999999999998877776666655444443332 344677888899 99
Q ss_pred EEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE----EEEEee
Q psy467 347 VYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSH 386 (845)
Q Consensus 347 IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~ 386 (845)
|||+.+++++..+..|...|++++|+ ||++||++ +.+|.+
T Consensus 343 lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL 387 (393)
T 4gq1_A 343 LINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRL 387 (393)
T ss_dssp EEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEE
T ss_pred EEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 99999999988888899999999999 99999988 655643
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-26 Score=279.60 Aligned_cols=256 Identities=19% Similarity=0.239 Sum_probs=207.8
Q ss_pred EEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC--CCcEEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEE
Q psy467 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA--VPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKL 126 (845)
Q Consensus 51 i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~--tg~~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~I 126 (845)
+..+.+|.+.|++++|+|++++|++|+.||.|++||+. +++.+..+.+|.+.|++++|+++ +++|++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 34678999999999999999999999999999999998 55777889999999999999988 899999999999999
Q ss_pred EECCCCc--eEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCccee
Q psy467 127 WDLRRKG--CIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202 (845)
Q Consensus 127 WDl~t~~--~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs 202 (845)
||+.+++ .+..+..|...|.+++|+|+ ++++++|+.||.|++ ||+.++....
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v-------------wdl~~~~~~~----------- 137 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV-------------VEFKENGTTS----------- 137 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE-------------EECCSSSCCC-----------
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE-------------EEeecCCCcc-----------
Confidence 9999887 77788889999999999999 999999999999999 9998764411
Q ss_pred ecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE
Q psy467 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282 (845)
Q Consensus 203 ~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla 282 (845)
...+.+|... + .++.|+|... .......
T Consensus 138 -------~~~~~~~~~~-------v---------------------------~~l~~~p~~~-----------~~~~~~~ 165 (753)
T 3jro_A 138 -------PIIIDAHAIG-------V---------------------------NSASWAPATI-----------EEDGEHN 165 (753)
T ss_dssp -------CEEEECCSSC-------E---------------------------EEEEECCCC-------------------
T ss_pred -------eeEeecCCCc-------e---------------------------EEEEecCccc-----------ccccccc
Confidence 2334455554 5 6677776421 0000111
Q ss_pred EcCCCCcccceEEEEEeCCCeEEEEECCCC----eEEEEecCCCCCEEEEEEeCC---CCEEEEEeCCC-EEEEEecCCc
Q psy467 283 ILPQSPMLCFILTTSSSADRTVNFWDLEKF----SLVSTTEKNSSTIRRLTFSEG---GECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 283 fSPdg~~~~~~lLatgs~DG~I~IWDl~s~----~~l~tl~gh~~~VtslafSpd---G~~Lasgs~DG-I~IWDl~tgk 354 (845)
..+++. ++++|+.||.|++||++++ .+...+.+|...|++++|+|+ +++|++|+.|| |++||+.+++
T Consensus 166 ~~~d~~-----~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 166 GTKESR-----KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp -CGGGC-----CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred cCCCCC-----EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 133455 8999999999999999876 677788899999999999999 99999999999 9999999864
Q ss_pred -----eEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 355 -----QYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 355 -----~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
.+.....|.+.|++++|+ +|++++++ |.+|..+
T Consensus 241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 333445688999999999 88888887 9999765
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-24 Score=230.87 Aligned_cols=273 Identities=15% Similarity=0.249 Sum_probs=209.4
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc--CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN--GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~--~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~ 137 (845)
..++|+||+++ +||+| .|++|+|||+.+++++..+. +|...|++++|+|++++|++|+.||.|++||+++++++..
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 35789999875 77776 59999999999999888764 5778899999999999999999999999999999999999
Q ss_pred EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCC---CCCCCCCcceeecCCCCeEEEEe
Q psy467 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG---TPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 138 ~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~---~~~~~~i~svs~spdg~~l~~~~ 214 (845)
+.+|...+.++.+. +..+++++.++.+.+ |+........ ..+...+..+.+.++++.+.+..
T Consensus 105 ~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 169 (318)
T 4ggc_A 105 MTSHSARVGSLSWN--SYILSSGSRSGHIHH-------------HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 169 (318)
T ss_dssp EECCSSCEEEEEEE--TTEEEEEETTSEEEE-------------EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ecCccceEEEeecC--CCEEEEEecCCceEe-------------eecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEe
Confidence 99999888776554 789999999999999 8877654321 12245566777788887665532
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
. ++.+.+|++...... .........+...+.+++++|++..+. .
T Consensus 170 ~------d~~i~iwd~~~~~~~----------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~--~ 213 (318)
T 4ggc_A 170 N------DNLVNVWPSAPGEGG----------------------------WVPLQTFTQHQGAVKAVAWCPWQSNVL--A 213 (318)
T ss_dssp T------TSCEEEEESSCBTTB----------------------------SCCSEEECCCCSCEEEEEECTTSTTEE--E
T ss_pred c------CcceeEEECCCCccc----------------------------ccceeeecccCCceEEEEecCCCCcEE--E
Confidence 2 112334333211100 000011112345678888888876421 3
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEe--CCC-EEEEEecCCceEEEecCCCCCeEEEEE
Q psy467 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGD--TEG-LKVYGWEPARQYDAQPMGWGKVQDLAV 371 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs--~DG-I~IWDl~tgk~l~tl~~h~~~VtsVaf 371 (845)
+++++.++.|++||........... +...+..++|++++..+++++ .|+ |+|||+.+++++.++.+|.+.|++++|
T Consensus 214 ~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~ 292 (318)
T 4ggc_A 214 TGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM 292 (318)
T ss_dssp EEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 4567788999999999888776655 567899999999999988765 678 999999999999999999999999999
Q ss_pred c-CCceEEEE-----EEEEee
Q psy467 372 T-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 372 S-dg~lLaaS-----VsiW~~ 386 (845)
+ +|++|+++ |.+|.+
T Consensus 293 spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 293 SPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp CTTSSCEEEEETTTEEEEECC
T ss_pred cCCCCEEEEEecCCeEEEEEC
Confidence 9 89888877 999965
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-24 Score=239.41 Aligned_cols=242 Identities=12% Similarity=0.051 Sum_probs=200.2
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLA 88 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~ 88 (845)
.+.+|.+.|.+++|++ ++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|+++++++++ .++.|++||+.
T Consensus 164 ~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 164 KYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp HHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 3558999999999998 899999999999999999999999999999999999999999999886554 79999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEE--------CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE-EE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGS--------LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI-AS 159 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs--------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L-as 159 (845)
+++.+..+..+ ..+.+++|+|+++++++++ .||.|++||+.+++.+..+. +...+.+++|+|+++.+ ++
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 243 TKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp TTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEE
T ss_pred CCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEE
Confidence 99988888754 5599999999999999888 48899999999988777663 55688999999999755 56
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
++.|+.+++ ||+.+++. +..+. +... +
T Consensus 321 ~~~~~~v~v-------------~d~~~~~~--------------------~~~~~-~~~~-------~------------ 347 (433)
T 3bws_A 321 DMCCSKIEV-------------YDLKEKKV--------------------QKSIP-VFDK-------P------------ 347 (433)
T ss_dssp ETTTTEEEE-------------EETTTTEE--------------------EEEEE-CSSS-------E------------
T ss_pred ecCCCEEEE-------------EECCCCcE--------------------EEEec-CCCC-------C------------
Confidence 688999999 99987766 33332 1111 2
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC---------------CCeE
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA---------------DRTV 304 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~---------------DG~I 304 (845)
..++|+|++. ++++++. ||.|
T Consensus 348 ---------------~~~~~s~dg~-----------------------------~l~~~~~~~~~~~~~~~~~g~~dg~v 383 (433)
T 3bws_A 348 ---------------NTIALSPDGK-----------------------------YLYVSCRGPNHPTEGYLKKGLVLGKV 383 (433)
T ss_dssp ---------------EEEEECTTSS-----------------------------EEEEEECCCCCTTTCTTSCCSSCCEE
T ss_pred ---------------CeEEEcCCCC-----------------------------EEEEEecCCCccccccccccccceEE
Confidence 4455555544 5555554 6799
Q ss_pred EEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeC-CC-EEEEEecC
Q psy467 305 NFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDT-EG-LKVYGWEP 352 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~-DG-I~IWDl~t 352 (845)
++||+.+++.+..+.. ...+.+++|+|+|++|++++. |+ |++|+++.
T Consensus 384 ~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 384 YVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9999999999988886 457999999999999998875 88 99999864
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=236.60 Aligned_cols=249 Identities=12% Similarity=0.131 Sum_probs=178.6
Q ss_pred eeEEeccCCC----cEEEEEEecCCCC---EEEEEeCCCeEEEEECCCC---eeEEEecCCCC-----------------
Q psy467 7 KAEDFMAHGA----SVNCLALGKKSGQ---VLATGGDDKKVNLWALGKS---NCIMSLSGHST----------------- 59 (845)
Q Consensus 7 ~l~~L~gH~~----~V~~LafSp~dg~---~LaTgs~DG~I~IWdl~t~---~~i~~l~~h~~----------------- 59 (845)
-+.+|+.-.+ .+.++-|-. .+- .++++++ ..|++|+..++ +.++++..|..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 104 (356)
T 2w18_A 27 LVSELKNPSGSCSVDVSAMFWER-AGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCV 104 (356)
T ss_dssp EEEEECCCCSSCEEEEEEEEEC-----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEE
T ss_pred eeehhcCCCCCeEEEEeeeeecc-CCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeee
Confidence 3455665444 356666644 333 5667775 48999999888 88888887765
Q ss_pred --------CeEEEEEcCC----CCEEEEEEC--------------------CCcEEEEEC-CCCcEEEEEcCCCCCeEEE
Q psy467 60 --------PVESVQFGNG----EETLSAGCQ--------------------SGSIKIWNL-AVPTVQRTLNGHKSSITSV 106 (845)
Q Consensus 60 --------~V~sLafSpd----g~~LaSgs~--------------------DGtV~VWDl-~tg~~v~~l~~h~~~V~~l 106 (845)
.|+.++|+|+ ++++++++. |+.|++|++ .+++.+..+..|...+..+
T Consensus 105 ~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 105 ALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETIL 184 (356)
T ss_dssp EECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEE
T ss_pred eeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeE
Confidence 4556667778 777777653 788888888 4477777777888888888
Q ss_pred EEcc---CCCEEEEEECCCeEEEEECCCCceEEEEcCCC---CCeEEEEEecCCCEE------------EEEeCCCcEEE
Q psy467 107 DFHP---YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS---KSINSIRFSPDGQWI------------ASGGEDGVVRI 168 (845)
Q Consensus 107 afsp---dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~---~~V~sLafSPdg~~L------------asgs~DG~I~I 168 (845)
+|++ ++.+|++++.|++|++||+.++++++++.+|. ..+.+++|+|+|.++ ++|+.|+++++
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 8888 67899999999999999999999999998654 367788999999987 45667777777
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||..+++. +..+.
T Consensus 265 -------------Wd~~tgk~--------------------l~v~~---------------------------------- 277 (356)
T 2w18_A 265 -------------INPKTTLS--------------------VGVML---------------------------------- 277 (356)
T ss_dssp -------------EETTTTEE--------------------EEEEE----------------------------------
T ss_pred -------------EECCCCEE--------------------EEEEE----------------------------------
Confidence 99988876 32211
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEE-E
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR-R 327 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vt-s 327 (845)
+.+ |++.. ....+..++ +. ++++|+.|++|+|||+.+++++.++.+|...+. +
T Consensus 278 --------~~~-p~Gh~----------~~~lsg~~s--g~-----~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~ 331 (356)
T 2w18_A 278 --------YCL-PPGQA----------GRFLEGDVK--DH-----CAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSF 331 (356)
T ss_dssp --------ECC-CTTCC----------CCEEEEEEE--TT-----EEEEEETTSCEEEEETTTCSEEEEECCC--CCCCE
T ss_pred --------eec-cCCCc----------ceeEccccC--CC-----EEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEE
Confidence 000 11110 000011111 33 899999999999999999999999999877655 6
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl 350 (845)
++|||||++|++|+.|+ |+|||+
T Consensus 332 vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 332 VKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEecC
Confidence 89999999999999999 999996
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=237.46 Aligned_cols=248 Identities=11% Similarity=0.068 Sum_probs=188.5
Q ss_pred cceeeeeE------EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC---------CCeeEEEec-CCCCCeEEEE
Q psy467 2 RAKVEKAE------DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG---------KSNCIMSLS-GHSTPVESVQ 65 (845)
Q Consensus 2 ~irlw~l~------~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~---------t~~~i~~l~-~h~~~V~sLa 65 (845)
++++|++. .+. ...|.++.|+| + +++++.|++|++|+.. +++.+..+. +|...|.+++
T Consensus 59 ~v~iwd~~~~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 132 (343)
T 3lrv_A 59 ALHFTQLKDSKTITTIT--TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMY 132 (343)
T ss_dssp EEEEEEESSSSCEEEEE--EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEECCCCcEEEEEe--cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEE
Confidence 35677753 232 46788889988 4 9999999999999765 455454443 6778999999
Q ss_pred EcC--CCCEEEEEECCCcEEEEECCCCcEEEEEc-CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE-EEEcC-
Q psy467 66 FGN--GEETLSAGCQSGSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI-YTYRG- 140 (845)
Q Consensus 66 fSp--dg~~LaSgs~DGtV~VWDl~tg~~v~~l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l-~~~~~- 140 (845)
|+| ++++|++++.||+|++||+++++...... .+...|.+++|+|++.+|++|+.||.|++||+++++.+ ..+..
T Consensus 133 ~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~ 212 (343)
T 3lrv_A 133 GHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVD 212 (343)
T ss_dssp CCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCC
T ss_pred cCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEecc
Confidence 999 99999999999999999999999877664 45568999999999999999999999999999999887 78888
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 141 h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
|...|.+++|+|++.+|++++. +.|++ ||+++++....+. .+..+...
T Consensus 213 h~~~v~~l~fs~~g~~l~s~~~-~~v~i-------------wd~~~~~~~~~~~-----------------~~~~~~~~- 260 (343)
T 3lrv_A 213 EEAKIKEVKFADNGYWMVVECD-QTVVC-------------FDLRKDVGTLAYP-----------------TYTIPEFK- 260 (343)
T ss_dssp TTSCEEEEEECTTSSEEEEEES-SBEEE-------------EETTSSTTCBSSC-----------------CCBC-----
T ss_pred CCCCEEEEEEeCCCCEEEEEeC-CeEEE-------------EEcCCCCcceeec-----------------cccccccc-
Confidence 9999999999999999999994 59999 9999876621100 00001010
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
+ .. .+++|+|+|+ +|++++.
T Consensus 261 ------~---------------------------~~----------------------~~~~~~~~g~-----~l~~~s~ 280 (343)
T 3lrv_A 261 ------T---------------------------GT----------------------VTYDIDDSGK-----NMIAYSN 280 (343)
T ss_dssp ----------------------------------CC----------------------EEEEECTTSS-----EEEEEET
T ss_pred ------c---------------------------cc----------------------eEEEECCCCC-----EEEEecC
Confidence 1 00 2344555554 8999888
Q ss_pred -CCeEEEEECCCCeEEEEecCCCCCEEEEEEeC---CCCEEEEEeCCC-EEEEEec
Q psy467 301 -DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE---GGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 301 -DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp---dG~~Lasgs~DG-I~IWDl~ 351 (845)
|+.|++|++.+....... .++..++|++ +++.|++++.|+ +.++-..
T Consensus 281 ~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 281 ESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp TTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred CCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 999999998665432222 4678888988 888999999999 7776543
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.5e-24 Score=238.92 Aligned_cols=268 Identities=13% Similarity=0.085 Sum_probs=206.6
Q ss_pred cceeeee----------EEeccCCCcEEEEEEecC-------------CCCEEEEEeCC------CeEEEEECCCCeeEE
Q psy467 2 RAKVEKA----------EDFMAHGASVNCLALGKK-------------SGQVLATGGDD------KKVNLWALGKSNCIM 52 (845)
Q Consensus 2 ~irlw~l----------~~L~gH~~~V~~LafSp~-------------dg~~LaTgs~D------G~I~IWdl~t~~~i~ 52 (845)
++++|++ +.+.+|...+.++++++. .+..++.++.+ +.|++||+.. ....
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~ 172 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQF 172 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCE
Confidence 4678877 457889888888887641 15667766654 7999999974 5567
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEECCC---cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE-EEECCC--eEEE
Q psy467 53 SLSGHSTPVESVQFGNGEETLSAGCQSG---SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDS--FIKL 126 (845)
Q Consensus 53 ~l~~h~~~V~sLafSpdg~~LaSgs~DG---tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La-sgs~DG--~I~I 126 (845)
.+.+|...|.+++|+|+|++|++++.++ .|++||+.+++.. .+..|...+.+++|+|||++|+ +++.++ .|++
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~ 251 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV 251 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEE
Confidence 7788999999999999999999999875 9999999998875 4556888899999999999887 666655 4999
Q ss_pred EECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-CC--cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceee
Q psy467 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-DG--VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 127 WDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-DG--~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~ 203 (845)
||+.+++. ..+..|...+.+++|+|||++|++++. ++ .|.+ ||+.+++.
T Consensus 252 ~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~-------------~d~~~~~~-------------- 303 (415)
T 2hqs_A 252 MDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK-------------VNINGGAP-------------- 303 (415)
T ss_dssp EETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE-------------EETTSSCC--------------
T ss_pred EECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE-------------EECCCCCE--------------
Confidence 99988765 567778888999999999999988876 45 4555 78876654
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
. .+..+... + ..++|+|++.
T Consensus 304 ------~-~l~~~~~~-------~---------------------------~~~~~spdG~------------------- 323 (415)
T 2hqs_A 304 ------Q-RITWEGSQ-------N---------------------------QDADVSSDGK------------------- 323 (415)
T ss_dssp ------E-ECCCSSSE-------E---------------------------EEEEECTTSS-------------------
T ss_pred ------E-EEecCCCc-------c---------------------------cCeEECCCCC-------------------
Confidence 1 11111111 2 3445555555
Q ss_pred cCCCCcccceEEEEEeCC---CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC----EEEEEecCCceE
Q psy467 284 LPQSPMLCFILTTSSSAD---RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG----LKVYGWEPARQY 356 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~D---G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG----I~IWDl~tgk~l 356 (845)
+|++++.+ ..|++||+.+++.. .+..+. .+.+++|+|||++|++++.++ |++||+. ++..
T Consensus 324 ----------~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~ 390 (415)
T 2hqs_A 324 ----------FMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFK 390 (415)
T ss_dssp ----------EEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCE
T ss_pred ----------EEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcE
Confidence 77777654 58999999988774 455554 899999999999998887654 8888876 5667
Q ss_pred EEecCCCCCeEEEEEc
Q psy467 357 DAQPMGWGKVQDLAVT 372 (845)
Q Consensus 357 ~tl~~h~~~VtsVafS 372 (845)
..+..|.+.|++++|+
T Consensus 391 ~~l~~~~~~v~~~~~~ 406 (415)
T 2hqs_A 391 ARLPATDGQVKFPAWS 406 (415)
T ss_dssp EECCCSSSEEEEEEEC
T ss_pred EEeeCCCCCCcCCccc
Confidence 8889999999999999
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=248.18 Aligned_cols=244 Identities=10% Similarity=0.112 Sum_probs=181.9
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCC-----CeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST-----PVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~-----~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
+|...|.+++||| +|++||+++.||.|+||+.+. ++..+. |.. .|.+++|||||++||+|+.||+|++||+
T Consensus 83 ~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 83 QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 6788999999999 999999999999999999654 666677 665 5999999999999999999999999999
Q ss_pred CCCc-------EEEEE----cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce---EEEE-cCCCCCeEEEEEec
Q psy467 88 AVPT-------VQRTL----NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC---IYTY-RGHSKSINSIRFSP 152 (845)
Q Consensus 88 ~tg~-------~v~~l----~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~---l~~~-~~h~~~V~sLafSP 152 (845)
.++. .+.++ .+|...|.+++|+||| +++++.|+.|++||+.++.. ..++ .+|...|.+++|+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs- 235 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV- 235 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-
Confidence 9885 36776 6778899999999999 88999999999999987763 3566 4788899999999
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc-CCC-CCCCCCcceee--cCCCCeEEEEecCCCCCccceeeEe
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP-LGT-PPPQYTSSVPF--SHNTSLRKSFTKGRPGGTKAKIDVT 228 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~-l~~-~~~~~i~svs~--spdg~~l~~~~~h~~~~~~~~i~V~ 228 (845)
|+.||+++ ++.|++ ||+.+++. ... -+...+.+++| +|++..+... ...+ . .+|
T Consensus 236 -g~~LASa~-~~tIkL-------------Wd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a--~edG----~-klw 293 (588)
T 2j04_A 236 -DYKVVLTC-PGYVHK-------------IDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMS--NKTS----Y-KVL 293 (588)
T ss_dssp -TTEEEEEC-SSEEEE-------------EETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEEC--SSCE----E-EEE
T ss_pred -CCEEEEEe-CCeEEE-------------EECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEE--cCCC----C-EEE
Confidence 68899887 699999 99987766 111 12344445555 5555333221 1000 0 011
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEE
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWD 308 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWD 308 (845)
.. + .++++||+. ++++. |+++++|+
T Consensus 294 ~~-------------------------------d-----------------~~~~spd~~-----l~a~~--d~~v~lW~ 318 (588)
T 2j04_A 294 LE-------------------------------D-----------------ELHVTADNI-----IAPYL--EKKFKKWS 318 (588)
T ss_dssp ES-------------------------------S-----------------SEEEECCCS-----SHHHH--HHHHHHTT
T ss_pred ee-------------------------------c-----------------cEEECCCce-----EEEEc--CCEEEEEE
Confidence 00 0 234555555 44443 78888887
Q ss_pred CCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeC
Q psy467 309 LEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 309 l~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~ 342 (845)
...+. +..+.+ ...|.+++|||||+.+|+++.
T Consensus 319 ~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 319 TIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp TTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred CCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 65443 333333 556999999999999998864
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-23 Score=230.27 Aligned_cols=240 Identities=11% Similarity=0.117 Sum_probs=179.9
Q ss_pred EEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE-EEEEC
Q psy467 42 LWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSL 120 (845)
Q Consensus 42 IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L-asgs~ 120 (845)
||++.+...+.....|...|.+++|+|||++|++|+.++ +++|++.+++....... ..+..+++.++++.+ ++++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECC
Confidence 566667777777889999999999999999999997665 78999998776655442 247888999988877 56778
Q ss_pred CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC-ccCCCCCCCCCc
Q psy467 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV-HPLGTPPPQYTS 199 (845)
Q Consensus 121 DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg-~~l~~~~~~~i~ 199 (845)
|+.|++||+.+++++..+. +...|.+++|+++. ++++ .|+.|++ ||+.++ +.+..
T Consensus 80 d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i-------------~d~~~~~~~~~~------- 135 (355)
T 3vu4_A 80 KEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISV-------------FKFGNPWKRITD------- 135 (355)
T ss_dssp TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEE-------------EESSTTCCBSSC-------
T ss_pred ccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEE-------------EECCCCceeeEE-------
Confidence 8999999999999999887 66789999999764 4444 4778999 999877 44211
Q ss_pred ceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCce
Q psy467 200 SVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRT 279 (845)
Q Consensus 200 svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~ 279 (845)
+.. . . ..+++++ .
T Consensus 136 -------------~~~---~-------~---------------------------~~~~~s~--~--------------- 148 (355)
T 3vu4_A 136 -------------DIR---F-------G---------------------------GVCEFSN--G--------------- 148 (355)
T ss_dssp -------------CEE---E-------E---------------------------EEEEEET--T---------------
T ss_pred -------------ecc---C-------C---------------------------ceEEEEc--c---------------
Confidence 111 0 1 2233444 2
Q ss_pred eEEEcCCCCcccceEEEE--EeCCCeEEEEECCCCe----------------EEEEecCCCCCEEEEEEeCCCCEEEEEe
Q psy467 280 SLSILPQSPMLCFILTTS--SSADRTVNFWDLEKFS----------------LVSTTEKNSSTIRRLTFSEGGECLLGGD 341 (845)
Q Consensus 280 slafSPdg~~~~~~lLat--gs~DG~I~IWDl~s~~----------------~l~tl~gh~~~VtslafSpdG~~Lasgs 341 (845)
++++ |+.||.|++||+.++. ++..+.+|.+.|++++|+|+|++||+|+
T Consensus 149 --------------~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 149 --------------LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS 214 (355)
T ss_dssp --------------EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred --------------EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe
Confidence 4554 6889999999999865 2678899999999999999999999999
Q ss_pred CCC--EEEEEecCCceEEEec-C-CCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 342 TEG--LKVYGWEPARQYDAQP-M-GWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 342 ~DG--I~IWDl~tgk~l~tl~-~-h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
.|+ |+|||+.+++++..+. + |...|++++|+ ++++|+++ |.+|.+...
T Consensus 215 ~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 215 QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 998 9999999999999998 5 99999999999 89988887 999987544
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-22 Score=240.69 Aligned_cols=326 Identities=12% Similarity=0.127 Sum_probs=227.2
Q ss_pred CCcEEEEEEecCCCCEEEEEeC-CC-----eEEEEECCCCeeEEEecCCCC------------------------CeEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGD-DK-----KVNLWALGKSNCIMSLSGHST------------------------PVESV 64 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~-DG-----~I~IWdl~t~~~i~~l~~h~~------------------------~V~sL 64 (845)
...|.+++||| +|++|++++. |+ .|++||+.+++....+..+.. .|.++
T Consensus 36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 45799999999 9999999998 88 899999999988777765433 38899
Q ss_pred EEcCCCCEEEEEECCCcEEEEECCCCc--EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC
Q psy467 65 QFGNGEETLSAGCQSGSIKIWNLAVPT--VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142 (845)
Q Consensus 65 afSpdg~~LaSgs~DGtV~VWDl~tg~--~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~ 142 (845)
+|||||++|++++. +.|.+||+.++. ....+..|...+.+++|+|||++|++++ ++.|++||+.+++.......+.
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence 99999999999986 999999999872 3455666788899999999999999887 4689999999877665444333
Q ss_pred CC----------------eEEEEEecCCCEEEEEeCCCc-EEEe--------------eeecc-----CCceeEEEECCC
Q psy467 143 KS----------------INSIRFSPDGQWIASGGEDGV-VRIG--------------ASFHL-----TNTSIHVVDLSL 186 (845)
Q Consensus 143 ~~----------------V~sLafSPdg~~Lasgs~DG~-I~I~--------------~~~~~-----~~~~I~vWDl~t 186 (845)
.. +.+++|+|||++|++++.|+. +..+ ..|.. ....+++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 32 477999999999999876651 0000 00100 111566699987
Q ss_pred -CccCCCC----CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcC
Q psy467 187 -VHPLGTP----PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQP 261 (845)
Q Consensus 187 -g~~l~~~----~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fsp 261 (845)
++..... ....+..++| |||+.+......... ....+.++++..... ..+.-..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~-~~~~i~~~d~~~g~~-------------------~~~~~~~ 331 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ-KKLDLVEVTLASNQQ-------------------RVLAHET 331 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS-SEEEEEEEETTTCCE-------------------EEEEEEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC-CeEEEEEEECCCCce-------------------EEEEEcC
Confidence 7653222 2345678999 999988765432211 112222222111000 0000000
Q ss_pred CCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC-CCeEEEEecCCCCCEEEE-EEeCCCCEEEE
Q psy467 262 HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE-KFSLVSTTEKNSSTIRRL-TFSEGGECLLG 339 (845)
Q Consensus 262 dg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~-s~~~l~tl~gh~~~Vtsl-afSpdG~~Las 339 (845)
... ....+..++|+|||+ ++++++.||.++||.+. ++. ...+..|...|..+ .|+|+|+.|+.
T Consensus 332 ~~~---------~~~~~~~~~~spdg~-----~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~ 396 (741)
T 2ecf_A 332 SPT---------WVPLHNSLRFLDDGS-----ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYF 396 (741)
T ss_dssp CSS---------CCCCCSCCEECTTSC-----EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEE
T ss_pred CCC---------cCCcCCceEECCCCe-----EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEE
Confidence 000 001345788999998 88999999987777665 345 77788888888887 59999997754
Q ss_pred -EeCCC---EEEEEecC-CceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 340 -GDTEG---LKVYGWEP-ARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 340 -gs~DG---I~IWDl~t-gk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
++.++ ++||++.. +.....+.. ...+.+++|+ ||+.|+..
T Consensus 397 ~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 397 RAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDS 442 (741)
T ss_dssp EECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEE
T ss_pred EEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEE
Confidence 44443 89999985 555666665 6678999999 99988876
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-21 Score=229.89 Aligned_cols=305 Identities=11% Similarity=0.064 Sum_probs=230.8
Q ss_pred EEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC--CCCcEEEEEcCC
Q psy467 22 ALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL--AVPTVQRTLNGH 99 (845)
Q Consensus 22 afSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl--~tg~~v~~l~~h 99 (845)
+|+| ++.++++++.|++|.+||..+++++.++..+.. +.+++|+|||++|++++.|++|.+||+ .+++.+.++. +
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~ 220 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-I 220 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-C
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-c
Confidence 4888 888999999999999999999999999984333 899999999999999999999999999 8899888888 4
Q ss_pred CCCeEEEEEcc----CCCEEEEEE-CCCeEEEEECCCCceEEEEcCC-----------CCCeEEEEEecCCCE-EEEEeC
Q psy467 100 KSSITSVDFHP----YGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGH-----------SKSINSIRFSPDGQW-IASGGE 162 (845)
Q Consensus 100 ~~~V~~lafsp----dg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h-----------~~~V~sLafSPdg~~-Lasgs~ 162 (845)
...+..++|+| ||+++++++ .+++|.+||..+++++..+..+ ...+.++.++|++.. +++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 55689999999 999999888 4899999999999998887642 236889999997765 556667
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCC--CC-CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLG--TP-PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~--~~-~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
++.|.+ ||..+.+.+. .. .......+.|+|+|+++......... +.+++.....
T Consensus 301 ~g~i~v-------------vd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~-----v~v~D~~tg~----- 357 (543)
T 1nir_A 301 TGKVLL-------------VNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNK-----VAVIDSKDRR----- 357 (543)
T ss_dssp TTEEEE-------------EECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTE-----EEEEETTTTE-----
T ss_pred CCeEEE-------------EEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCe-----EEEEECCCCe-----
Confidence 899999 9988765432 11 24567789999999977554332222 2232222110
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCC-------
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEK------- 311 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s------- 311 (845)
.+..-+-+. .++......+ ++|++.. +++++. .|++|.+||+.+
T Consensus 358 ----------------l~~~i~~g~-------~ph~g~g~~~-~~p~~g~----~~~s~~~~d~~V~v~d~~~~~~~~~~ 409 (543)
T 1nir_A 358 ----------------LSALVDVGK-------TPHPGRGANF-VHPKYGP----VWSTSHLGDGSISLIGTDPKNHPQYA 409 (543)
T ss_dssp ----------------EEEEEECSS-------SBCCTTCEEE-EETTTEE----EEEEEBSSSSEEEEEECCTTTCTTTB
T ss_pred ----------------EEEeeccCC-------CCCCCCCccc-CCCCCcc----EEEeccCCCceEEEEEeCCCCCchhc
Confidence 111111111 1111111122 4666331 677775 689999999998
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCCEEEEEe-------CCC-EEEEEecCCceE-EEe--------cCCCCCeEEEEEc-C
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGECLLGGD-------TEG-LKVYGWEPARQY-DAQ--------PMGWGKVQDLAVT-G 373 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~~Lasgs-------~DG-I~IWDl~tgk~l-~tl--------~~h~~~VtsVafS-d 373 (845)
+++++++.+|.+.+..++|+|+|++|++++ .++ |.|||+.+++.. ..+ ..+...+..++|+ +
T Consensus 410 ~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 489 (543)
T 1nir_A 410 WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKR 489 (543)
T ss_dssp TSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSS
T ss_pred CeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCC
Confidence 899999999988899999999999999987 144 999999998876 544 3567789999999 9
Q ss_pred CceEEEE
Q psy467 374 TQLWFRR 380 (845)
Q Consensus 374 g~lLaaS 380 (845)
|+.+.++
T Consensus 490 g~~~~~s 496 (543)
T 1nir_A 490 GDEVWFS 496 (543)
T ss_dssp SSEEEEE
T ss_pred CCEEEEE
Confidence 9998865
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=228.54 Aligned_cols=264 Identities=12% Similarity=0.087 Sum_probs=201.9
Q ss_pred CCcEEEEEEecCCCCEEEEEe----CCC----eEEEEEC--CCCeeE--EEecCCCCCeEEEEEcC--------------
Q psy467 15 GASVNCLALGKKSGQVLATGG----DDK----KVNLWAL--GKSNCI--MSLSGHSTPVESVQFGN-------------- 68 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs----~DG----~I~IWdl--~t~~~i--~~l~~h~~~V~sLafSp-------------- 68 (845)
...|...+|++.+.+++++|+ .+| .|+|||+ .+++.+ ..+.+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 346778888885567887886 567 8999999 888877 55888888888887764
Q ss_pred CCCEEEEEECC------CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC---eEEEEECCCCceEEEEc
Q psy467 69 GEETLSAGCQS------GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS---FIKLWDLRRKGCIYTYR 139 (845)
Q Consensus 69 dg~~LaSgs~D------GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG---~I~IWDl~t~~~l~~~~ 139 (845)
.+..++.++.+ +.|++||++. .....+..|...+.+++|+|||++|++++.++ .|++||+.+++.. .+.
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 25667666654 7999999985 44566777889999999999999999999875 9999999988775 456
Q ss_pred CCCCCeEEEEEecCCCEEE-EEeCCCc--EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecC
Q psy467 140 GHSKSINSIRFSPDGQWIA-SGGEDGV--VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 140 ~h~~~V~sLafSPdg~~La-sgs~DG~--I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h 216 (845)
.+...+.+++|+|||++|+ +++.++. |++ ||+.+++. ..+..+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~-------------~d~~~~~~---------------------~~l~~~ 265 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV-------------MDLASGQI---------------------RQVTDG 265 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEE-------------EETTTCCE---------------------EECCCC
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEE-------------EECCCCCE---------------------EeCcCC
Confidence 6788899999999999888 5666655 666 99887654 222222
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
... + ..+.|+|++. .|+
T Consensus 266 ~~~-------~---------------------------~~~~~spdg~-----------------------------~l~ 282 (415)
T 2hqs_A 266 RSN-------N---------------------------TEPTWFPDSQ-----------------------------NLA 282 (415)
T ss_dssp SSC-------E---------------------------EEEEECTTSS-----------------------------EEE
T ss_pred CCc-------c---------------------------cceEECCCCC-----------------------------EEE
Confidence 222 2 4455555555 777
Q ss_pred EEeC-CC--eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC---C-EEEEEecCCceEEEecCCCCCeEEE
Q psy467 297 SSSA-DR--TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE---G-LKVYGWEPARQYDAQPMGWGKVQDL 369 (845)
Q Consensus 297 tgs~-DG--~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D---G-I~IWDl~tgk~l~tl~~h~~~VtsV 369 (845)
+++. ++ .|++||+.+++. ..+..+...+.+++|+|||++|++++.+ . |++||+.+++.. .+..+. .+.++
T Consensus 283 ~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~ 359 (415)
T 2hqs_A 283 FTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETP 359 (415)
T ss_dssp EEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEE
T ss_pred EEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCe
Confidence 7775 44 788889988764 3455567789999999999999988764 3 999999998764 455554 89999
Q ss_pred EEc-CCceEEEE
Q psy467 370 AVT-GTQLWFRR 380 (845)
Q Consensus 370 afS-dg~lLaaS 380 (845)
+|+ +|++|+.+
T Consensus 360 ~~spdg~~l~~~ 371 (415)
T 2hqs_A 360 SLAPNGTMVIYS 371 (415)
T ss_dssp EECTTSSEEEEE
T ss_pred EEcCCCCEEEEE
Confidence 999 89887766
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8e-21 Score=205.94 Aligned_cols=270 Identities=10% Similarity=0.017 Sum_probs=210.1
Q ss_pred CCCcEEEEEEecCCCCEEEEEeC-------CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGD-------DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIW 85 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~-------DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VW 85 (845)
....+..++|+| +++++++++. ++.|.+||..+++.+..+.. ...+..++|+|+++++++++ .++.|.+|
T Consensus 39 ~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQ-QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEET-TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred hccCccceEECC-CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 345788999999 8888887764 56899999999998888764 34578899999999665554 47999999
Q ss_pred ECCCCcEEEEEcCCCCC---------eEEEEEccCCCEEEEEE--CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC
Q psy467 86 NLAVPTVQRTLNGHKSS---------ITSVDFHPYGDYLCSGS--LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~---------V~~lafspdg~~Lasgs--~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg 154 (845)
|..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||..+++.+..+..+...+.+++|+|+|
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 99999988888754422 68899999999887776 47899999999999988887566668899999999
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
+++++++.++.+.+ ||..+++. +..+......
T Consensus 197 ~~l~~~~~~~~i~~-------------~d~~~~~~--------------------~~~~~~~~~~--------------- 228 (353)
T 3vgz_A 197 KRLYTTNADGELIT-------------IDTADNKI--------------------LSRKKLLDDG--------------- 228 (353)
T ss_dssp TEEEEECTTSEEEE-------------EETTTTEE--------------------EEEEECCCSS---------------
T ss_pred CEEEEEcCCCeEEE-------------EECCCCeE--------------------EEEEEcCCCC---------------
Confidence 99999999999999 99988776 3333221110
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCe
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFS 313 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~ 313 (845)
. ...+..++|+|+++ .+++++ .++.|.+||+.+++
T Consensus 229 -----------------------------~----------~~~~~~~~~s~dg~-----~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 229 -----------------------------K----------EHFFINISLDTARQ-----RAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp -----------------------------S----------CCCEEEEEEETTTT-----EEEEEESSSSEEEEEETTTCC
T ss_pred -----------------------------C----------CcccceEEECCCCC-----EEEEEeCCCCEEEEEECCCCc
Confidence 0 01223445555554 555554 55999999999999
Q ss_pred EEEEecCCCCCEEEEEEeCCCCEEEEEe-CCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 314 LVSTTEKNSSTIRRLTFSEGGECLLGGD-TEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 314 ~l~tl~gh~~~VtslafSpdG~~Lasgs-~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.+..+.... ..+++|+|+|+++++++ .++ |.+||..+++.+..+..+ ..+.+++|+ +|++|+++
T Consensus 265 ~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 265 ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVS 331 (353)
T ss_dssp EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEE
T ss_pred EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEE
Confidence 888887543 26799999999777666 466 999999999988887654 478999999 99977766
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8e-22 Score=216.09 Aligned_cols=195 Identities=14% Similarity=0.103 Sum_probs=151.5
Q ss_pred cEEEEEEecCC----CCEEEEEeC--------------------CCeEEEEEC-CCCeeEEEecCCCCCeEEEEEcC---
Q psy467 17 SVNCLALGKKS----GQVLATGGD--------------------DKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGN--- 68 (845)
Q Consensus 17 ~V~~LafSp~d----g~~LaTgs~--------------------DG~I~IWdl-~t~~~i~~l~~h~~~V~sLafSp--- 68 (845)
.|++++|+| + ++++++++. |+.|++|++ .+++.+..+..|...+..++|++
T Consensus 113 ~v~sla~sp-d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g 191 (356)
T 2w18_A 113 EIRALFCSS-DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQG 191 (356)
T ss_dssp EEEEECC-------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEET
T ss_pred ceEEEEECC-CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCC
Confidence 456666666 6 677777553 788888888 55777777888888888888888
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEcCCC---CCeEEEEEccCCCEE------------EEEECCCeEEEEECCCCc
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK---SSITSVDFHPYGDYL------------CSGSLDSFIKLWDLRRKG 133 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~---~~V~~lafspdg~~L------------asgs~DG~I~IWDl~t~~ 133 (845)
++.+|++|+.|++|+|||+.++++++++.+|. ..+.+++|+|+|.++ ++|+.|++|++||..+++
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 77899999999999999999999999998654 367788999999876 567889999999999998
Q ss_pred eEEEE-----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 134 CIYTY-----RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 134 ~l~~~-----~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
.+..+ .+|...+.+..++ +.++++++.|++|++ ||+.+++.
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkI-------------WDl~tGk~------------------- 317 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAI-------------WDLLLGQC------------------- 317 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEE-------------EETTTCSE-------------------
T ss_pred EEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEE-------------EECCCCcE-------------------
Confidence 87765 3566655555554 889999999999999 99999998
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSP 288 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~ 288 (845)
+.++.+|... + ...++|+|+++
T Consensus 318 -l~tL~gH~~~-------v--------------------------vs~vafSPDG~------------------------ 339 (356)
T 2w18_A 318 -TALLPPVSDQ-------H--------------------------WSFVKWSGTDS------------------------ 339 (356)
T ss_dssp -EEEECCC--C-------C--------------------------CCEEEECSSSS------------------------
T ss_pred -EEEecCCCCC-------e--------------------------EEEEEECCCCC------------------------
Confidence 7887777654 3 02356666666
Q ss_pred cccceEEEEEeCCCeEEEEEC
Q psy467 289 MLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 289 ~~~~~lLatgs~DG~I~IWDl 309 (845)
+|++|+.|++|+|||+
T Consensus 340 -----~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 340 -----HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -----EEEEECTTSCEEEEEE
T ss_pred -----EEEEEECCCcEEEecC
Confidence 9999999999999995
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.7e-21 Score=204.64 Aligned_cols=283 Identities=8% Similarity=0.043 Sum_probs=204.1
Q ss_pred EEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC-CCcEEEEECCCCcE-EEEEcC
Q psy467 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ-SGSIKIWNLAVPTV-QRTLNG 98 (845)
Q Consensus 21 LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~-DGtV~VWDl~tg~~-v~~l~~ 98 (845)
..|.++.+..+++++.++.|.+||..+++....+..+...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 34555345567788889999999999999988887777777 9999999997777666 88999999999987 777776
Q ss_pred CCCCeEEEEEccCCCEEEEEECCC---eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE-eCCCc-EEEeeeec
Q psy467 99 HKSSITSVDFHPYGDYLCSGSLDS---FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG-GEDGV-VRIGASFH 173 (845)
Q Consensus 99 h~~~V~~lafspdg~~Lasgs~DG---~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg-s~DG~-I~I~~~~~ 173 (845)
+..+..+++|+|++++++++..++ .|.+||+.+++.+..+.. .....+++|+|||++++++ ..++. +.+
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~----- 155 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRR----- 155 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEE-----
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEE-----
Confidence 666666599999999999655553 899999999998888764 4457999999999865554 55577 999
Q ss_pred cCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~ 253 (845)
|++..... +.....
T Consensus 156 --------~~~~~~g~--------------------~~~~~~-------------------------------------- 169 (331)
T 3u4y_A 156 --------FKIDADGV--------------------LFDTGQ-------------------------------------- 169 (331)
T ss_dssp --------EEECTTCC--------------------EEEEEE--------------------------------------
T ss_pred --------EEECCCCc--------------------EeecCC--------------------------------------
Confidence 99875333 111000
Q ss_pred ceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE---EEEecCCCCCEEEEEE
Q psy467 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL---VSTTEKNSSTIRRLTF 330 (845)
Q Consensus 254 ~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~---l~tl~gh~~~Vtslaf 330 (845)
.. + +.+ .....++|+|||+. +++++..++.|.+||+.+++. +..+..+ ..+..++|
T Consensus 170 -~~--~-~~~------------~~~~~~~~spdg~~----l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~ 228 (331)
T 3u4y_A 170 -EF--I-SGG------------TRPFNITFTPDGNF----AFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVV 228 (331)
T ss_dssp -EE--E-CSS------------SSEEEEEECTTSSE----EEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEE
T ss_pred -cc--c-cCC------------CCccceEECCCCCE----EEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEE
Confidence 00 0 111 12345666666652 445555789999999998887 7777653 56789999
Q ss_pred eCCCCEEEEEeC-CC-EEEEEecCCce--EEEecCC----CC---CeEEEEEc-CCceEEEE------EEEEeeCCCCCc
Q psy467 331 SEGGECLLGGDT-EG-LKVYGWEPARQ--YDAQPMG----WG---KVQDLAVT-GTQLWFRR------VGTWSHQDSGFS 392 (845)
Q Consensus 331 SpdG~~Lasgs~-DG-I~IWDl~tgk~--l~tl~~h----~~---~VtsVafS-dg~lLaaS------VsiW~~d~~~~~ 392 (845)
+|||++|++++. ++ |.+||..+++. +..+..+ .. .+..++|+ ||++|+++ |.+|.+......
T Consensus 229 spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 229 SRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVG 308 (331)
T ss_dssp CTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEE
T ss_pred CCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccc
Confidence 999998877765 44 99999999877 4444322 22 23568999 89888665 899988766554
Q ss_pred cccCC
Q psy467 393 TLDSY 397 (845)
Q Consensus 393 ~~~~~ 397 (845)
.....
T Consensus 309 ~~~~~ 313 (331)
T 3u4y_A 309 YVAGI 313 (331)
T ss_dssp ECTTC
T ss_pred ceecc
Confidence 44333
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.3e-21 Score=239.39 Aligned_cols=338 Identities=9% Similarity=0.012 Sum_probs=234.7
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCC------CeEEEEECCCCeeEEEecCCCCCe-------EEEEEcCCCCEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDD------KKVNLWALGKSNCIMSLSGHSTPV-------ESVQFGNGEETLS 74 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~D------G~I~IWdl~t~~~i~~l~~h~~~V-------~sLafSpdg~~La 74 (845)
.+.+.+|.+.|.+++||| +|++||+++.+ ..|++|++.+++ ...+..|...+ .+++|+|||+.++
T Consensus 45 ~~~lt~~~~~v~~~~~SP-DG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~ 122 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFP-DGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLII 122 (1045)
T ss_dssp EEEEECSSSEEEEEEECT-TSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEE
T ss_pred EEEeeeCCCcccCeEECC-CCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEE
Confidence 467889999999999999 99999988643 379999998876 67788888888 9999999999777
Q ss_pred EEECC------CcEEEEECCCCcEE-------------------------------------------------EEEcCC
Q psy467 75 AGCQS------GSIKIWNLAVPTVQ-------------------------------------------------RTLNGH 99 (845)
Q Consensus 75 Sgs~D------GtV~VWDl~tg~~v-------------------------------------------------~~l~~h 99 (845)
+++.+ ..|.+|++.+++.. ..+.+|
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~ 202 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDM 202 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECC
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCC
Confidence 77644 35888887655432 122346
Q ss_pred CCCeEEEEEccCCCEEEEEECCCeEEEEECCC-CceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCce
Q psy467 100 KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTS 178 (845)
Q Consensus 100 ~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~ 178 (845)
...+.++.|+++ ..+++++.++.+.+|.+.. +.....+..|. .+..++|+|||++|+.+ .++.|.+
T Consensus 203 ~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~---------- 269 (1045)
T 1k32_A 203 STHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYI---------- 269 (1045)
T ss_dssp SSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEE----------
T ss_pred CCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEE----------
Confidence 667788889887 5667778889889998753 44455555554 46778999999998887 4788998
Q ss_pred eEEEECCCCccCCCCCC-------------CCCcceeec-CCCCeEEEEecCCCCCccceeeEeeecccccccccccch-
Q psy467 179 IHVVDLSLVHPLGTPPP-------------QYTSSVPFS-HNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE- 243 (845)
Q Consensus 179 I~vWDl~tg~~l~~~~~-------------~~i~svs~s-pdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~- 243 (845)
||+...... .+.. ..+..++|+ |+|+.++..... .+.++.+.............
T Consensus 270 ---~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~-------~i~~~~~~~~~~~~~~~~~~~ 338 (1045)
T 1k32_A 270 ---FNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRG-------QAFIQDVSGTYVLKVPEPLRI 338 (1045)
T ss_dssp ---ECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETT-------EEEEECTTSSBEEECSCCSCE
T ss_pred ---ecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEEcC-------EEEEEcCCCCceEEccCCCcc
Confidence 887433322 2221 257889999 999987765411 11122211111000000000
Q ss_pred hh----h------hhccCCCceeE-EEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 244 EL----F------ATIANPCDYSA-IFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 244 ~l----~------~~~~~~~~~~l-~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
.. + ..... ..... .+...+... .....+...+..++|||||+ +|++++.++.|++||+.++
T Consensus 339 ~~~~~~~sdg~~l~~~s~-~~~l~~~~d~~~~~~--~~l~~~~~~~~~~~~SpDG~-----~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 339 RYVRRGGDTKVAFIHGTR-EGDFLGIYDYRTGKA--EKFEENLGNVFAMGVDRNGK-----FAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp EEEEECSSSEEEEEEEET-TEEEEEEEETTTCCE--EECCCCCCSEEEEEECTTSS-----EEEEEETTSEEEEEETTTC
T ss_pred eEEeeeEcCCCeEEEEEC-CCceEEEEECCCCCc--eEecCCccceeeeEECCCCC-----EEEEECCCCeEEEEECCCC
Confidence 00 0 00000 00111 122222100 01113345678999999999 8999999999999999999
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCC----------C-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTE----------G-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~D----------G-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
+....+.+|.+.+.+++|||||++|++++.+ + |++||+.+++ +..+..|...+.+++|+ ||+.|+..
T Consensus 411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEE
Confidence 9888887898999999999999999887642 3 9999999887 67788888899999999 99988766
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-20 Score=200.30 Aligned_cols=298 Identities=11% Similarity=0.038 Sum_probs=203.7
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCCC--CeEEEEEcCCCCEEEE-EECCCcEEEEECCCCcEEEEEcCCC-----
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHST--PVESVQFGNGEETLSA-GCQSGSIKIWNLAVPTVQRTLNGHK----- 100 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~--~V~sLafSpdg~~LaS-gs~DGtV~VWDl~tg~~v~~l~~h~----- 100 (845)
+++++++.++.|.+||..+++.+..+..... .+.+++|+|+++++++ +..++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 5789999999999999999998888763322 5889999999987654 4557899999999999887775321
Q ss_pred CCeEEEEEccCCCEEEEEE------------CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 101 SSITSVDFHPYGDYLCSGS------------LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 101 ~~V~~lafspdg~~Lasgs------------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..+.+++|+|+|+++++++ .++.|.+||+.+++.+..+.. ...+.+++|+|+|++|+++ ++.+.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 2577899999999998886 579999999999888877764 4568889999999988887 578999
Q ss_pred eeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
||+.+++...... ......+.++|+++.+......... ...++....... +.... .
T Consensus 159 -------------~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~----~~~~~~~~~~~~-----~~~~~-~ 215 (337)
T 1pby_B 159 -------------MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGV----MATPFYTARKDI-----DPADP-T 215 (337)
T ss_dssp -------------EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTE----EEEEEEEEBTTS-----CTTSG-G
T ss_pred -------------EECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCc----eeeeeecccccc-----ccccc-c
Confidence 9998887653333 1223455788888755322111110 000000000000 00000 0
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts 327 (845)
. .......+..................+.+++|+|||+ +++++ ++.|.+||+.+++.+..+..+ ..+.+
T Consensus 216 ~---~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~-----~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~ 284 (337)
T 1pby_B 216 A---YRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKT-----RAFGA--YNVLESFDLEKNASIKRVPLP-HSYYS 284 (337)
T ss_dssp G---EEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSS-----EEEEE--ESEEEEEETTTTEEEEEEECS-SCCCE
T ss_pred c---cccceEEEeCCCCCceEeecCCCCCceeeEEECCCCC-----EEEEe--CCeEEEEECCCCcCcceecCC-Cceee
Confidence 0 0000112222211000000011123566799999998 67776 799999999999988887753 46789
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCC
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGW 363 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~ 363 (845)
++|+|+|++|++++.++ |++||+.+++.+..+..+.
T Consensus 285 ~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 285 VNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred EEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 99999999999998888 9999999999888876543
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.88 E-value=8.7e-22 Score=236.32 Aligned_cols=328 Identities=10% Similarity=0.063 Sum_probs=217.8
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCC---CeEEEEEcCCCCEEEEEECC---------CcEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST---PVESVQFGNGEETLSAGCQS---------GSIK 83 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~---~V~sLafSpdg~~LaSgs~D---------GtV~ 83 (845)
..+.+++|+| +|+++++ +.||+|++||+.+++....+..|.. .|.+++|||||++|++++.+ +.|.
T Consensus 17 ~~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcC-CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 3578899999 8887776 7899999999999988888887765 49999999999999999764 7888
Q ss_pred EEECCCCcEEEEEc---CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCe---------------
Q psy467 84 IWNLAVPTVQRTLN---GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI--------------- 145 (845)
Q Consensus 84 VWDl~tg~~v~~l~---~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V--------------- 145 (845)
+||+.+++. ..+. .|...+..++|+|||+.|+.++. +.|++||+.+++.......+...+
T Consensus 95 ~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp EEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred EEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence 999998876 3443 34445889999999999999886 799999999887776655444333
Q ss_pred ---EEEEEecCCCEEEEEeCCC-cEEEeeee---------------c-----cCCceeEEEECCCCccCCCCC-------
Q psy467 146 ---NSIRFSPDGQWIASGGEDG-VVRIGASF---------------H-----LTNTSIHVVDLSLVHPLGTPP------- 194 (845)
Q Consensus 146 ---~sLafSPdg~~Lasgs~DG-~I~I~~~~---------------~-----~~~~~I~vWDl~tg~~l~~~~------- 194 (845)
.+++|+|||++|++++.|+ .+.+|... . .....+.+||+.+++....+.
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 7899999999999887553 23222211 0 012367889998887432222
Q ss_pred -CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccc
Q psy467 195 -PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVP 273 (845)
Q Consensus 195 -~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~ 273 (845)
...+..++|+|||+.+........ ....+.++++...... ..+.....+.
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~g~~~------------------~~~~~~~~~~--------- 303 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQ--NVSILTLCDATTGVCT------------------KKHEDESEAW--------- 303 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTS--CEEEEEEEETTTCCEE------------------EEEEEECSSC---------
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCC--CeEEEEEEeCCCCcce------------------EEEEeccCCE---------
Confidence 234667999999997755433211 1122222221110000 0000000010
Q ss_pred cccCceeEEEcCCCCcccceEEEE-EeCCC------eEEEEE-CCCCe--EEEEecCCCCCEEE-EEEeCCCCEEEEEeC
Q psy467 274 VSVSRTSLSILPQSPMLCFILTTS-SSADR------TVNFWD-LEKFS--LVSTTEKNSSTIRR-LTFSEGGECLLGGDT 342 (845)
Q Consensus 274 ~~~~I~slafSPdg~~~~~~lLat-gs~DG------~I~IWD-l~s~~--~l~tl~gh~~~Vts-lafSpdG~~Lasgs~ 342 (845)
.......++|+|||+. ++++ +..++ .|++|| ...+. +...+..+...+.. ++|||||+.|+..+.
T Consensus 304 ~~~~~~~~~~spdg~~----l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~ 379 (723)
T 1xfd_A 304 LHRQNEEPVFSKDGRK----FFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLST 379 (723)
T ss_dssp CCCCCCCCEECTTSCS----EEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEES
T ss_pred EeccCCCceEcCCCCe----EEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEc
Confidence 0000136789999984 3333 55677 577788 34444 14445433344554 699999999986655
Q ss_pred C---C-EEEEEecCCc--eEEEecC---CCCCeEEEEEc-CCceEEEE
Q psy467 343 E---G-LKVYGWEPAR--QYDAQPM---GWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 343 D---G-I~IWDl~tgk--~l~tl~~---h~~~VtsVafS-dg~lLaaS 380 (845)
+ + ++||+++... ....+.. |...+..++|+ ||++++..
T Consensus 380 ~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 380 EDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp SSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred CCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 4 6 9999987532 3444543 66779999999 99988876
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-21 Score=202.01 Aligned_cols=246 Identities=13% Similarity=0.081 Sum_probs=183.8
Q ss_pred EeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CcEEEEEcCC-CCCeEEEEEccC
Q psy467 34 GGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV-PTVQRTLNGH-KSSITSVDFHPY 111 (845)
Q Consensus 34 gs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t-g~~v~~l~~h-~~~V~~lafspd 111 (845)
++.|+.|++||+.+++... +..|...|.+++|+|++++|++++ ++.|.+||+.+ ++.......+ ...+.+++|+|+
T Consensus 18 ~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 4578899999999887664 455889999999999999999986 88999999999 8777666555 367899999999
Q ss_pred CCEEEEEEC--CC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE-EEeCCCcEEEeeeeccCCceeEEEECC-
Q psy467 112 GDYLCSGSL--DS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA-SGGEDGVVRIGASFHLTNTSIHVVDLS- 185 (845)
Q Consensus 112 g~~Lasgs~--DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La-sgs~DG~I~I~~~~~~~~~~I~vWDl~- 185 (845)
+++|++++. ++ .|..|++.++. ...+..+ ..+.+++|+|++++|+ +++.++.+.+ |++.
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l-------------~~~~~ 160 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDI-------------YSMDI 160 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEE-------------EEEET
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEE-------------EEEEC
Confidence 999999983 34 45555555544 3444433 3489999999999877 7778898888 7753
Q ss_pred -CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCC
Q psy467 186 -LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS 264 (845)
Q Consensus 186 -tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~ 264 (845)
++.. ..+..+..
T Consensus 161 ~~~~~---------------------~~~~~~~~---------------------------------------------- 173 (297)
T 2ojh_A 161 DSGVE---------------------TRLTHGEG---------------------------------------------- 173 (297)
T ss_dssp TTCCE---------------------EECCCSSS----------------------------------------------
T ss_pred CCCcc---------------------eEcccCCC----------------------------------------------
Confidence 2221 11111111
Q ss_pred cCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECC-CCeEEEEecCCCCCEEEEEEeCCCCEEEEEeC
Q psy467 265 LNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLE-KFSLVSTTEKNSSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 265 ~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~-s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~ 342 (845)
.+.+++|+|+++ ++++++ .++.+.+|++. .+..+..+..|...+.+++|+|+|++|++++.
T Consensus 174 ------------~~~~~~~s~dg~-----~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 174 ------------RNDGPDYSPDGR-----WIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp ------------CEEEEEECTTSS-----EEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred ------------ccccceECCCCC-----EEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence 223444445544 666555 58899999886 45667778888888999999999999998876
Q ss_pred C-----------C-EEEEEecCCce--EEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 343 E-----------G-LKVYGWEPARQ--YDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 343 D-----------G-I~IWDl~tgk~--l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
+ + |.+||+.+++. +..+.+|...+.+++|+ +++.|+++
T Consensus 237 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 237 DADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYV 289 (297)
T ss_dssp ETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEE
T ss_pred CCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEE
Confidence 5 4 99999998865 34455788899999999 88888765
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-20 Score=219.94 Aligned_cols=305 Identities=9% Similarity=0.064 Sum_probs=214.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEEC--CCCeeEEEecCCCCCeEEEEEcC----CCCEEEEEEC-CC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWAL--GKSNCIMSLSGHSTPVESVQFGN----GEETLSAGCQ-SG 80 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl--~t~~~i~~l~~h~~~V~sLafSp----dg~~LaSgs~-DG 80 (845)
++++..+.. +.+++|+| +|++|++++.|+.|.+||+ .+++.+.++. +...+..++|+| +|++|++++. ++
T Consensus 172 ~~~i~~g~~-~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 172 VKVIDTGYA-VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp EEEEECSTT-EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred EEEEecCcc-cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCC
Confidence 355663333 89999999 9999999999999999999 8899888888 456689999999 9999999884 89
Q ss_pred cEEEEECCCCcEEEEEcCC-----------CCCeEEEEEccCCCE-EEEEECCCeEEEEECCCCceEE--EEcCCCCCeE
Q psy467 81 SIKIWNLAVPTVQRTLNGH-----------KSSITSVDFHPYGDY-LCSGSLDSFIKLWDLRRKGCIY--TYRGHSKSIN 146 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~~h-----------~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~t~~~l~--~~~~h~~~V~ 146 (845)
+|.+||..+++++..+..+ ...+..+.++|++.. +++...++.|.+||+.+.+.+. .+. +...+.
T Consensus 249 ~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~ 327 (543)
T 1nir_A 249 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLH 327 (543)
T ss_dssp EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCC
T ss_pred eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCcc
Confidence 9999999999999888642 236889999998765 4566778999999998766543 443 566788
Q ss_pred EEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCC----CCCccee-ecCCCCeEEEEecCCCCC
Q psy467 147 SIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP----QYTSSVP-FSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 147 sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~----~~i~svs-~spdg~~l~~~~~h~~~~ 220 (845)
+++|+|+|+++++++ .+++|.+ ||..+++.+..+.. ..-+... ++|++..+.. ..+...
T Consensus 328 ~~~~spdg~~l~va~~~~~~v~v-------------~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~-s~~~~d- 392 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNSNKVAV-------------IDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWS-TSHLGD- 392 (543)
T ss_dssp CEEECTTSCEEEEEEGGGTEEEE-------------EETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEE-EEBSSS-
T ss_pred CceECCCCCEEEEEecCCCeEEE-------------EECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEE-eccCCC-
Confidence 999999999877655 5789999 99999887443221 1111222 2455332222 111111
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS- 299 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs- 299 (845)
..+.++++..... ++..+........+...+..++++|+|+ .|++++
T Consensus 393 --~~V~v~d~~~~~~-------------------------~~~~~~~v~~l~~~g~~~~~v~~~pdg~-----~l~v~~~ 440 (543)
T 1nir_A 393 --GSISLIGTDPKNH-------------------------PQYAWKKVAELQGQGGGSLFIKTHPKSS-----HLYVDTT 440 (543)
T ss_dssp --SEEEEEECCTTTC-------------------------TTTBTSEEEEEECSCSCCCCEECCTTCC-----EEEECCT
T ss_pred --ceEEEEEeCCCCC-------------------------chhcCeEEEEEEcCCCCceEEEcCCCCC-----cEEEecC
Confidence 1122322211000 0000000001111123456788999998 788876
Q ss_pred ------CCCeEEEEECCCCeEE-EEe--------cCCCCCEEEEEEeCCCCEEEEEe-----CCC-EEEEEecCCceEEE
Q psy467 300 ------ADRTVNFWDLEKFSLV-STT--------EKNSSTIRRLTFSEGGECLLGGD-----TEG-LKVYGWEPARQYDA 358 (845)
Q Consensus 300 ------~DG~I~IWDl~s~~~l-~tl--------~gh~~~VtslafSpdG~~Lasgs-----~DG-I~IWDl~tgk~l~t 358 (845)
.+++|.+||+.+++.. ..+ ..+...+..+.|+|+|+.|+++. .++ |.|||..+++++.+
T Consensus 441 ~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 441 FNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp TCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred CCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEe
Confidence 2679999999998776 443 34567899999999999998763 357 99999999999999
Q ss_pred ecCCC
Q psy467 359 QPMGW 363 (845)
Q Consensus 359 l~~h~ 363 (845)
++.+.
T Consensus 521 i~~~~ 525 (543)
T 1nir_A 521 VKDPR 525 (543)
T ss_dssp ECCTT
T ss_pred ecCCC
Confidence 88543
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-19 Score=195.33 Aligned_cols=268 Identities=11% Similarity=0.115 Sum_probs=187.2
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCC-CeEEEEECC--CCe--eEEEecCCCCCeEEEEEcCCCCEEEEEEC-CCcEEEE
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDD-KKVNLWALG--KSN--CIMSLSGHSTPVESVQFGNGEETLSAGCQ-SGSIKIW 85 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~D-G~I~IWdl~--t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs~-DGtV~VW 85 (845)
..|...+.+++|+| +|++|++++.+ +.|.+|++. +++ .+..+..+. .+.+++|+|++++|++++. ++.|.+|
T Consensus 34 ~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 34 VDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp EECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 45788899999999 89988888876 899999997 544 344555444 7899999999998877765 8889999
Q ss_pred ECC---CCcEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCC-CceEE----EEcC-CCCCeEEEEEecCCC
Q psy467 86 NLA---VPTVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRR-KGCIY----TYRG-HSKSINSIRFSPDGQ 155 (845)
Q Consensus 86 Dl~---tg~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t-~~~l~----~~~~-h~~~V~sLafSPdg~ 155 (845)
|+. +.+.+..+..+ ..+.+++|+|+++++++++ .++.|.+||+.+ ++... .+.. ....+.+++|+|+++
T Consensus 112 d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 994 34455555533 4588999999999888887 899999999987 54432 2222 345788999999999
Q ss_pred EEEEEe-CCCcEEEeeeeccCCceeEEEECCC--CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 156 WIASGG-EDGVVRIGASFHLTNTSIHVVDLSL--VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 156 ~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~t--g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++++++ .++.+.+ ||+.. +.. .....+..
T Consensus 191 ~l~~~~~~~~~i~~-------------~~~~~~~g~~------------------~~~~~~~~----------------- 222 (343)
T 1ri6_A 191 YAYCVNELNSSVDV-------------WELKDPHGNI------------------ECVQTLDM----------------- 222 (343)
T ss_dssp EEEEEETTTTEEEE-------------EESSCTTSCC------------------EEEEEEEC-----------------
T ss_pred EEEEEeCCCCEEEE-------------EEecCCCCcE------------------EEEeeccc-----------------
Confidence 776655 7889999 99853 222 00011000
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE-EEeCCCeEEEEECC-
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT-SSSADRTVNFWDLE- 310 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa-tgs~DG~I~IWDl~- 310 (845)
.+.+. .....+..++|+|+|+ +|+ ++..++.|.+||+.
T Consensus 223 ---------------------------~~~~~--------~~~~~~~~i~~s~dg~-----~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 223 ---------------------------MPENF--------SDTRWAADIHITPDGR-----HLYACDRTASLITVFSVSE 262 (343)
T ss_dssp ---------------------------SCTTC--------CSCCCEEEEEECTTSS-----EEEEEETTTTEEEEEEECT
T ss_pred ---------------------------cCccc--------cccCCccceEECCCCC-----EEEEEecCCCEEEEEEEcC
Confidence 00000 0012234566666665 554 55579999999998
Q ss_pred ---CCeEEEEecCCCCCEEEEEEeCCCCEEEEEe-CCC-EEEEEec--CCc--eEEEecCCCCCeEEEEEc
Q psy467 311 ---KFSLVSTTEKNSSTIRRLTFSEGGECLLGGD-TEG-LKVYGWE--PAR--QYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 311 ---s~~~l~tl~gh~~~VtslafSpdG~~Lasgs-~DG-I~IWDl~--tgk--~l~tl~~h~~~VtsVafS 372 (845)
+.+.+..+..+.. +.+++|+|+|++|++++ .++ |.+|+++ +++ .+..+.. .....+++|.
T Consensus 263 ~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~ 331 (343)
T 1ri6_A 263 DGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVN 331 (343)
T ss_dssp TSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEE
T ss_pred CCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEE
Confidence 3345556655444 89999999999999888 466 9999766 553 3344443 2456677776
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-20 Score=197.76 Aligned_cols=237 Identities=13% Similarity=0.106 Sum_probs=175.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-CeeEEEecCC-CCCeEEEEEcCCCCEEEEEEC--CCcEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-SNCIMSLSGH-STPVESVQFGNGEETLSAGCQ--SGSIK 83 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-~~~i~~l~~h-~~~V~sLafSpdg~~LaSgs~--DGtV~ 83 (845)
...+..|...|.+++|+| +|++|++++ ++.|.+||+.+ ++.......| ...+.+++|+|++++|++++. ++.+.
T Consensus 34 ~~~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSA 111 (297)
T ss_dssp EEEEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCE
T ss_pred eeeeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcce
Confidence 356778999999999999 999999987 78999999998 8777666665 467899999999999999983 34455
Q ss_pred EE--ECCCCcEEEEEcCCCCCeEEEEEccCCCEEE-EEECCCeEEEEECC-CCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 84 IW--NLAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIKLWDLR-RKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 84 VW--Dl~tg~~v~~l~~h~~~V~~lafspdg~~La-sgs~DG~I~IWDl~-t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
|| +..++. ...+..+ ..+.+++|+|++++|+ +++.++.+.+|++. .......+..+...+.+++|+|++++|+.
T Consensus 112 l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 112 IYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYF 189 (297)
T ss_dssp EEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEE
T ss_pred EEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEE
Confidence 54 555554 4445433 3489999999999887 77889999999863 23344566667888999999999998887
Q ss_pred Ee-CCCcEEEeeeeccCCceeEEEECC-CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 160 GG-EDGVVRIGASFHLTNTSIHVVDLS-LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 160 gs-~DG~I~I~~~~~~~~~~I~vWDl~-tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
++ .++.+.+ |++. .+.. +..+..+... +
T Consensus 190 ~~~~~~~~~i-------------~~~~~~~~~--------------------~~~~~~~~~~-------~---------- 219 (297)
T 2ojh_A 190 NSSRTGQMQI-------------WRVRVDGSS--------------------VERITDSAYG-------D---------- 219 (297)
T ss_dssp EECTTSSCEE-------------EEEETTSSC--------------------EEECCCCSEE-------E----------
T ss_pred EecCCCCccE-------------EEECCCCCC--------------------cEEEecCCcc-------c----------
Confidence 66 5888888 8765 2222 2222221111 2
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC-----------CeEEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD-----------RTVNF 306 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D-----------G~I~I 306 (845)
..+.|+|++. +|++++.+ +.|++
T Consensus 220 -----------------~~~~~s~dg~-----------------------------~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 220 -----------------WFPHPSPSGD-----------------------------KVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp -----------------EEEEECTTSS-----------------------------EEEEEEEETTCCSCCSSEEEEEEE
T ss_pred -----------------CCeEECCCCC-----------------------------EEEEEEcCCCCCcccccCceEEEE
Confidence 3444555544 77777655 56999
Q ss_pred EECCCCeE--EEEecCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy467 307 WDLEKFSL--VSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344 (845)
Q Consensus 307 WDl~s~~~--l~tl~gh~~~VtslafSpdG~~Lasgs~DG 344 (845)
||+.+++. +..+.+|...+.+++|+|+|++|++++.+.
T Consensus 254 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 254 MDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99988754 445557888999999999999998887653
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-19 Score=193.77 Aligned_cols=264 Identities=13% Similarity=0.201 Sum_probs=183.7
Q ss_pred EEEEEeCCCeEEEEECC-CC--eeEEEecCCCCCeEEEEEcCCCCEEEEEECC-CcEEEEECC--CCc--EEEEEcCCCC
Q psy467 30 VLATGGDDKKVNLWALG-KS--NCIMSLSGHSTPVESVQFGNGEETLSAGCQS-GSIKIWNLA--VPT--VQRTLNGHKS 101 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~-t~--~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D-GtV~VWDl~--tg~--~v~~l~~h~~ 101 (845)
++++++.|+.|++|++. ++ +.+..+ .|...+.+++|+|++++|++++.+ +.|.+|++. +++ .+..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-
Confidence 44444779999999985 33 333333 477789999999999999998886 999999998 554 344555444
Q ss_pred CeEEEEEccCCCEEEEEEC-CCeEEEEECC---CCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCC
Q psy467 102 SITSVDFHPYGDYLCSGSL-DSFIKLWDLR---RKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTN 176 (845)
Q Consensus 102 ~V~~lafspdg~~Lasgs~-DG~I~IWDl~---t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~ 176 (845)
.+.+++|+|++++|++++. ++.|.+||+. ....+..+.. ...+.+++|+|+|+++++++ .++.|.+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~-------- 155 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICL-------- 155 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEE--------
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEE--------
Confidence 7889999999998877765 8899999994 3344555543 34688999999999888887 8899999
Q ss_pred ceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCce
Q psy467 177 TSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDY 255 (845)
Q Consensus 177 ~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 255 (845)
||+.+ ++. ......
T Consensus 156 -----~d~~~~~~~--------------------~~~~~~---------------------------------------- 170 (343)
T 1ri6_A 156 -----FTVSDDGHL--------------------VAQDPA---------------------------------------- 170 (343)
T ss_dssp -----EEECTTSCE--------------------EEEEEE----------------------------------------
T ss_pred -----EEecCCCce--------------------eeeccc----------------------------------------
Confidence 99876 332 110000
Q ss_pred eEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE-EEeCCCeEEEEECCC--CeE--EEEec----CC--CCC
Q psy467 256 SAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT-SSSADRTVNFWDLEK--FSL--VSTTE----KN--SST 324 (845)
Q Consensus 256 ~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa-tgs~DG~I~IWDl~s--~~~--l~tl~----gh--~~~ 324 (845)
.... +.+ ..+..++|+|+++ +++ ++..++.|.+||+.. ++. ...+. ++ ...
T Consensus 171 ~~~~-~~~------------~~~~~~~~~pdg~-----~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 232 (343)
T 1ri6_A 171 EVTT-VEG------------AGPRHMVFHPNEQ-----YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW 232 (343)
T ss_dssp EEEC-STT------------CCEEEEEECTTSS-----EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred cccc-CCC------------CCcceEEECCCCC-----EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCC
Confidence 0000 000 1233455666655 554 555889999999953 332 33332 11 235
Q ss_pred EEEEEEeCCCCEEEEEe-CCC-EEEEEec--CC--ceEEEecCCCCCeEEEEEc-CCceEEEE------EEEEeeCC
Q psy467 325 IRRLTFSEGGECLLGGD-TEG-LKVYGWE--PA--RQYDAQPMGWGKVQDLAVT-GTQLWFRR------VGTWSHQD 388 (845)
Q Consensus 325 VtslafSpdG~~Lasgs-~DG-I~IWDl~--tg--k~l~tl~~h~~~VtsVafS-dg~lLaaS------VsiW~~d~ 388 (845)
+.+++|+|+|++|+++. .++ |.+|++. ++ +.+..+..+.. +.+++|+ +|++|+++ +.+|.++.
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred ccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 77899999999888555 577 9999998 33 44555555544 8999999 89888777 89997763
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-19 Score=228.19 Aligned_cols=342 Identities=7% Similarity=-0.029 Sum_probs=226.1
Q ss_pred ceeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC---
Q psy467 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS--- 79 (845)
Q Consensus 3 irlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D--- 79 (845)
.++|..... .+.+.+.+.+||+ +.||.++. +.|++|++.+++ ...+..|...+.+++|||||++||+++.+
T Consensus 3 ~kl~~~~g~-~~~~~~~~~~~S~---~~iaf~~~-~~l~~~~~~gg~-~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~ 76 (1045)
T 1k32_A 3 FKLHEMHGL-CMPNLLLNPDIHG---DRIIFVCC-DDLWEHDLKSGS-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSS 76 (1045)
T ss_dssp -----------CCCCCEEEEEET---TEEEEEET-TEEEEEETTTCC-EEEEECSSSEEEEEEECTTSSEEEEEEEESTT
T ss_pred ccccccccc-cccceEeCcEEeC---CEEEEEEC-CcEEEEECCCCc-EEEeeeCCCcccCeEECCCCCEEEEEEeeccC
Confidence 455554333 3567899999986 57887775 689999998765 45677899999999999999999988643
Q ss_pred ---CcEEEEECCCCcEEEEEcCCCCCe-------EEEEEccCCCEEEEEECC------CeEEEEECCCCceEE-------
Q psy467 80 ---GSIKIWNLAVPTVQRTLNGHKSSI-------TSVDFHPYGDYLCSGSLD------SFIKLWDLRRKGCIY------- 136 (845)
Q Consensus 80 ---GtV~VWDl~tg~~v~~l~~h~~~V-------~~lafspdg~~Lasgs~D------G~I~IWDl~t~~~l~------- 136 (845)
..|.+|++.+++ ...+..|...+ ..++|+|||+.+++++.+ ..|.+||+.++....
T Consensus 77 ~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~ 155 (1045)
T 1k32_A 77 LNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPAT 155 (1045)
T ss_dssp CCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCS
T ss_pred CCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcc
Confidence 479999998776 56777788878 899999999977777644 468888876554321
Q ss_pred ------------------------------------------EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeecc
Q psy467 137 ------------------------------------------TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 137 ------------------------------------------~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~ 174 (845)
.+.+|...+.++.|+++ .++++++.|+.+.+
T Consensus 156 ~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l------ 228 (1045)
T 1k32_A 156 HILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQI------ 228 (1045)
T ss_dssp EEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEE------
T ss_pred eeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEE------
Confidence 11234444555555554 34444555555555
Q ss_pred CCceeEEEECC--CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch---hhhhhc
Q psy467 175 TNTSIHVVDLS--LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE---ELFATI 249 (845)
Q Consensus 175 ~~~~I~vWDl~--tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~---~l~~~~ 249 (845)
|.+. .+..............+|+|+|+.+..... ..+.++++...... ...... ......
T Consensus 229 -------~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~-------~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~ 293 (1045)
T 1k32_A 229 -------YSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKG-------GSIYIFNPDTEKIE-KIEIGDLESPEDRII 293 (1045)
T ss_dssp -------EEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEET-------TEEEEECTTTCCEE-ECCCCCCCBCCSEEE
T ss_pred -------EEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeC-------CEEEEecCCceEee-eeccCcccccccccc
Confidence 6654 222211112233556799999997766421 12223322110000 000000 000000
Q ss_pred cCCCceeEEEc-CCCCcCC-------------CCcc---ccccc-CceeEEEcCCCCcccceEEEEEeCCCeEE-EEECC
Q psy467 250 ANPCDYSAIFQ-PHRSLNR-------------SGTC---VPVSV-SRTSLSILPQSPMLCFILTTSSSADRTVN-FWDLE 310 (845)
Q Consensus 250 ~~~~~~~l~fs-pdg~~~~-------------~~~~---~~~~~-~I~slafSPdg~~~~~~lLatgs~DG~I~-IWDl~ 310 (845)
.......++|+ |++..+. .+.. ..+.. .+..++|+ ||+ .+++++.++.+. +||+.
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~-----~l~~~s~~~~l~~~~d~~ 367 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKV-----AFIHGTREGDFLGIYDYR 367 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEE-----EEEEEETTEEEEEEEETT
T ss_pred cccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCC-----eEEEEECCCceEEEEECC
Confidence 01123678888 8876331 1111 11223 67789999 998 788888888899 99998
Q ss_pred CCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 311 KFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 311 s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
+++... +.+|...+.+++|||||++|++++.++ |++||+.+++....+.+|.+.+.+++|| ||++|+++
T Consensus 368 ~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 368 TGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp TCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred CCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEE
Confidence 876554 447888999999999999999999999 9999999999888887899999999999 99988654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-19 Score=216.09 Aligned_cols=275 Identities=10% Similarity=0.042 Sum_probs=200.0
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-----C
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV-----P 90 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t-----g 90 (845)
..|.+++||| + ..++.+. ++.|++||+.+++... +..+...+.+++|+|||++|+++ .++.|.+||+.+ +
T Consensus 82 ~~v~~~~~sp-d-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAG-R-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETT-T-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECC-C-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 5699999999 6 5555553 5899999998887654 44567789999999999999996 689999999998 7
Q ss_pred cEEEEEcCCCCC--------------eEEEEEccCCCEEEEEE---------------------------------CCCe
Q psy467 91 TVQRTLNGHKSS--------------ITSVDFHPYGDYLCSGS---------------------------------LDSF 123 (845)
Q Consensus 91 ~~v~~l~~h~~~--------------V~~lafspdg~~Lasgs---------------------------------~DG~ 123 (845)
+.......+... +.+++|+|||++|++++ .+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 766544433332 48899999999999987 4467
Q ss_pred EEEEECCCCceEEEEc--CCCCCeEEEEEecCCCEEEEEeCCC-----cEEEeeeeccCCceeEEEECCCCccCCCCCCC
Q psy467 124 IKLWDLRRKGCIYTYR--GHSKSINSIRFSPDGQWIASGGEDG-----VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQ 196 (845)
Q Consensus 124 I~IWDl~t~~~l~~~~--~h~~~V~sLafSPdg~~Lasgs~DG-----~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~ 196 (845)
|++||+.+++...... .+...+.+++|+|||++|++++.++ .|.+ ||+.+++.
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~-------------~d~~~g~~------- 296 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNA-------------YDAETGRF------- 296 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEE-------------EETTTCCE-------
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEE-------------EECCCCce-------
Confidence 9999999887654432 3566789999999999999887665 6667 99988743
Q ss_pred CCcceeecCCCCeEEEEe-cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccc
Q psy467 197 YTSSVPFSHNTSLRKSFT-KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVS 275 (845)
Q Consensus 197 ~i~svs~spdg~~l~~~~-~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~ 275 (845)
...+. ..... . .
T Consensus 297 -------------~~~~~~~~~~~--------------------------------------------~----------~ 309 (706)
T 2z3z_A 297 -------------VRTLFVETDKH--------------------------------------------Y----------V 309 (706)
T ss_dssp -------------EEEEEEEECSS--------------------------------------------C----------C
T ss_pred -------------eeEEEEccCCC--------------------------------------------e----------E
Confidence 11111 00000 0 0
Q ss_pred cCceeEEEcC--CCCcccceEEEEEeCCCeEEEEECC-CCeEEEEecCCCCCEEE-EEEeCCCCEEEEEeCC-C-----E
Q psy467 276 VSRTSLSILP--QSPMLCFILTTSSSADRTVNFWDLE-KFSLVSTTEKNSSTIRR-LTFSEGGECLLGGDTE-G-----L 345 (845)
Q Consensus 276 ~~I~slafSP--dg~~~~~~lLatgs~DG~I~IWDl~-s~~~l~tl~gh~~~Vts-lafSpdG~~Lasgs~D-G-----I 345 (845)
..+..++|+| ||+ ++++++.|+.++||++. ++..+..+..|...+.+ ++|+|+|+.|++++.+ + |
T Consensus 310 ~~~~~~~~sp~~dg~-----~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l 384 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQ-----FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHF 384 (706)
T ss_dssp CCCSCCEECTTCSSE-----EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEE
T ss_pred CccCCceeecCCCCE-----EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEE
Confidence 0123455666 665 88999999999999876 67778888888777877 8999999988766543 2 4
Q ss_pred EEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE---------EEEEeeCCC
Q psy467 346 KVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR---------VGTWSHQDS 389 (845)
Q Consensus 346 ~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS---------VsiW~~d~~ 389 (845)
..||+.+++ ...+. |...+.+++|+ ||++++.+ +.+|..+..
T Consensus 385 ~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 385 YCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred EEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 445555554 34443 67789999999 99888766 556655443
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-19 Score=194.21 Aligned_cols=301 Identities=11% Similarity=0.056 Sum_probs=191.3
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCC-CCeEEEEEcCCCCEEEE-EECCCcEEEEECCCCcEEEEEc
Q psy467 20 CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHS-TPVESVQFGNGEETLSA-GCQSGSIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~-~~V~sLafSpdg~~LaS-gs~DGtV~VWDl~tg~~v~~l~ 97 (845)
.+++++ ++.++++++.++.|.+||..+++.+..+..+. ..+..++|+|+++++++ +..++.|.+||+.+++.+..+.
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 456777 88899999999999999999999888887443 25789999999987654 4468999999999998887776
Q ss_pred CCC------CCeEEEEEccCCCEEEEEECC------------CeEEEEECCCCc---eEEEEcCCCCCeEEEEEecCCCE
Q psy467 98 GHK------SSITSVDFHPYGDYLCSGSLD------------SFIKLWDLRRKG---CIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 98 ~h~------~~V~~lafspdg~~Lasgs~D------------G~I~IWDl~t~~---~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
.+. ..+.+++|+|+|+++++++.+ +.|.+||+.+++ .+..+. +...+.+++|+|||+
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS- 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-
Confidence 332 237889999999999998865 899999998743 334444 344688999999999
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCC-CcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY-TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~-i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
+++++. .|.+ ||..+++......... .......++... .+...... ........+.....
T Consensus 161 l~~~~~--~i~~-------------~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~d 221 (349)
T 1jmx_B 161 LYVAGP--DIYK-------------MDVKTGKYTVALPLRNWNRKGYSAPDVLY--FWPHQSPR--HEFSMLYTIARFKD 221 (349)
T ss_dssp EEEESS--SEEE-------------ECTTTCCEEEEECSTTCCCTTBCCCBCCC--CCCCCCTT--CEEEEEEEEEEC--
T ss_pred EEEccC--cEEE-------------EeCCCCceeccccccccCCccccCcccee--eecCCCcc--eeEEeeeeeeecCC
Confidence 555543 4888 9988877532221000 000000000000 00000000 00000000000000
Q ss_pred cc----ccccchhhh-hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC-CCCcccceEEEEEeCCCeEEEEEC
Q psy467 236 SE----DQAGEEELF-ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP-QSPMLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 236 ~~----~~~~~~~l~-~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP-dg~~~~~~lLatgs~DG~I~IWDl 309 (845)
.. ........+ ..........+.+.+ ....+..++|+| |++ +++++ ++.|.+||+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~sp~dg~-----~l~~~--~~~v~~~d~ 282 (349)
T 1jmx_B 222 DKQDPATADLLYGYLSVDLKTGKTHTQEFAD------------LTELYFTGLRSPKDPN-----QIYGV--LNRLAKYDL 282 (349)
T ss_dssp -----CCCEEEEEEEEEETTTCCEEEEEEEE------------CSSCEEEEEECSSCTT-----EEEEE--ESEEEEEET
T ss_pred CcCCccccccceeEEEEeccCCcEEeccccc------------CCCcceeeEecCCCCC-----EEEEE--cCeEEEEEC
Confidence 00 000000000 000000001111111 223567889999 988 67776 889999999
Q ss_pred CCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCC
Q psy467 310 EKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMG 362 (845)
Q Consensus 310 ~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h 362 (845)
.+++.+..+... ..+.+++|+|+|++|++++.++ |++||+.+++.+..+...
T Consensus 283 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 283 KQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp TTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred ccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 999988887643 4578999999999998888888 999999999988887654
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-18 Score=187.87 Aligned_cols=249 Identities=9% Similarity=0.091 Sum_probs=177.1
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeC-CCeEEEEECCCCee-EEEecCCCCCeEEEEEcCCCCEEEEEECCC---cEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGD-DKKVNLWALGKSNC-IMSLSGHSTPVESVQFGNGEETLSAGCQSG---SIK 83 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~-DG~I~IWdl~t~~~-i~~l~~h~~~V~sLafSpdg~~LaSgs~DG---tV~ 83 (845)
..+..+...+ +++|+| +|+++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++|+++..++ .|.
T Consensus 34 ~~~~~~~~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp EEEECCCCEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred eeEEccCCcc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEE
Confidence 3455566667 999999 8886666655 88999999999887 777777777776699999999999655453 899
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEE-ECCCe-EEEEECCCCceEE----EEcCCCCCeEEEEEecCCCEE
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG-SLDSF-IKLWDLRRKGCIY----TYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasg-s~DG~-I~IWDl~t~~~l~----~~~~h~~~V~sLafSPdg~~L 157 (845)
+||+.+++.+..+..+ ....+++|+|+|++++++ ..++. |.+|++.....+. ........+.+++|+|+|+++
T Consensus 112 v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 112 SYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFA 190 (331)
T ss_dssp EEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEE
T ss_pred EEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEE
Confidence 9999999988888744 456899999999866554 55578 9999997544331 222344568999999999976
Q ss_pred EEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 158 ASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 158 asgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
++++ .++.|.+ ||+.+++... .+..+..+
T Consensus 191 ~v~~~~~~~v~v-------------~d~~~~~~~~-----------------~~~~~~~~-------------------- 220 (331)
T 3u4y_A 191 FVANLIGNSIGI-------------LETQNPENIT-----------------LLNAVGTN-------------------- 220 (331)
T ss_dssp EEEETTTTEEEE-------------EECSSTTSCE-----------------EEEEEECS--------------------
T ss_pred EEEeCCCCeEEE-------------EECCCCcccc-----------------eeeeccCC--------------------
Confidence 5555 6788999 9988665400 01111111
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE-eCCCeEEEEECCCCeE-
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS-SADRTVNFWDLEKFSL- 314 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg-s~DG~I~IWDl~s~~~- 314 (845)
..+..++|+|||+ +++++ ..++.|.+||+.+++.
T Consensus 221 ---------------------------------------~~~~~~~~spdg~-----~l~v~~~~~~~i~~~d~~~~~~~ 256 (331)
T 3u4y_A 221 ---------------------------------------NLPGTIVVSRDGS-----TVYVLTESTVDVFNFNQLSGTLS 256 (331)
T ss_dssp ---------------------------------------SCCCCEEECTTSS-----EEEEECSSEEEEEEEETTTTEEE
T ss_pred ---------------------------------------CCCceEEECCCCC-----EEEEEEcCCCEEEEEECCCCcee
Confidence 1123445555555 55544 4578899999999877
Q ss_pred -EEEecCC----CC---CEEEEEEeCCCCEEEEEeCCC--EEEEEecCCc
Q psy467 315 -VSTTEKN----SS---TIRRLTFSEGGECLLGGDTEG--LKVYGWEPAR 354 (845)
Q Consensus 315 -l~tl~gh----~~---~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk 354 (845)
+..+..+ .. .+..++|+|||++|++++.++ |.+||+....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 257 FVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred eecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 4444432 21 235689999999997776654 9999997744
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-19 Score=215.61 Aligned_cols=303 Identities=11% Similarity=0.081 Sum_probs=204.7
Q ss_pred CCCeEEEEEcCCCCEEEEEEC-CC-----cEEEEECCCCcEEEEEcCCCC------------------------CeEEEE
Q psy467 58 STPVESVQFGNGEETLSAGCQ-SG-----SIKIWNLAVPTVQRTLNGHKS------------------------SITSVD 107 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~-DG-----tV~VWDl~tg~~v~~l~~h~~------------------------~V~~la 107 (845)
...+.+++|+|||++|++++. |+ .|++||+.+++....+..+.. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 899999999988777764433 278999
Q ss_pred EccCCCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECC
Q psy467 108 FHPYGDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLS 185 (845)
Q Consensus 108 fspdg~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~ 185 (845)
|+|||++|++++. +.|++||+.++. ....+..+...+.+++|+|||++|+.++. +.|++ ||+.
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~-------------~d~~ 180 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWV-------------IDLA 180 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEE-------------EETT
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEE-------------EecC
Confidence 9999999999886 999999998873 44456667788999999999999998874 57888 9998
Q ss_pred CCccCCCCCCCC------------------CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh-
Q psy467 186 LVHPLGTPPPQY------------------TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF- 246 (845)
Q Consensus 186 tg~~l~~~~~~~------------------i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~- 246 (845)
+++......... +..+.|+|||+.+......... ...+....... .. ........-
T Consensus 181 ~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~--~~~~~~~~~~p--~~-~~~~~~~~~~ 255 (741)
T 2ecf_A 181 SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESP--VPVQKRYEVYA--DR-TDVIEQRYPA 255 (741)
T ss_dssp TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTT--SCEEEEEEECS--SC-EEEEEEECCB
T ss_pred CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCC--CceEecCCCCC--Cc-ccceEeecCC
Confidence 876543332111 4789999999988765432211 00000000000 00 000000000
Q ss_pred hhccCCCceeEEEcCCC-CcCCCCcc-cccccCceeEEEcCCCCcccceEEEEEeC-----CCeEEEEECCCCeEEEEec
Q psy467 247 ATIANPCDYSAIFQPHR-SLNRSGTC-VPVSVSRTSLSILPQSPMLCFILTTSSSA-----DRTVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg-~~~~~~~~-~~~~~~I~slafSPdg~~~~~~lLatgs~-----DG~I~IWDl~s~~~l~tl~ 319 (845)
....+.......++.++ ........ ..+...+..++| |||+ .|++++. +..|++||+.++++...+.
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~-----~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 329 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQ-----HLSFQRQSRDQKKLDLVEVTLASNQQRVLAH 329 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETT-----EEEEEEEETTSSEEEEEEEETTTCCEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCC-----EEEEEEecccCCeEEEEEEECCCCceEEEEE
Confidence 00000000112233322 10000000 023456789999 9999 6665543 5689999999998877776
Q ss_pred CCCC----CEEEEEEeCCCCEEEEEeCCC-EEEEEec-CCceEEEecCCCCCeEEE-EEc-CCceEEEE--------EEE
Q psy467 320 KNSS----TIRRLTFSEGGECLLGGDTEG-LKVYGWE-PARQYDAQPMGWGKVQDL-AVT-GTQLWFRR--------VGT 383 (845)
Q Consensus 320 gh~~----~VtslafSpdG~~Lasgs~DG-I~IWDl~-tgk~l~tl~~h~~~VtsV-afS-dg~lLaaS--------Vsi 383 (845)
.+.. .+.+++|+|||+++++++.++ ++||.++ .++ ...+..|...|.++ .|+ +|+.|+++ +.+
T Consensus 330 ~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l 408 (741)
T 2ecf_A 330 ETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQI 408 (741)
T ss_dssp EECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEE
T ss_pred cCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEE
Confidence 5543 456899999999999999998 8888876 455 77888888889887 599 88877654 568
Q ss_pred EeeC
Q psy467 384 WSHQ 387 (845)
Q Consensus 384 W~~d 387 (845)
|.++
T Consensus 409 ~~~~ 412 (741)
T 2ecf_A 409 YAVP 412 (741)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-19 Score=210.61 Aligned_cols=263 Identities=17% Similarity=0.113 Sum_probs=190.3
Q ss_pred CCcEEEEEEecCCCCEEEEEeC-CCeEEEEECCCCeeEEEecCCC-CCeEEEEEcCCCCEEEEEEC---CCcEEEEECCC
Q psy467 15 GASVNCLALGKKSGQVLATGGD-DKKVNLWALGKSNCIMSLSGHS-TPVESVQFGNGEETLSAGCQ---SGSIKIWNLAV 89 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~~h~-~~V~sLafSpdg~~LaSgs~---DGtV~VWDl~t 89 (845)
..+|.+++|+| ||+.||+++. ||+++||++.+++.. .+..|. ..+..++|+|| +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCC-CCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 45799999999 9999999877 999999999666554 455555 68999999999 77777765 45556655432
Q ss_pred ---CcEEEEEcCCCCCeEEEEEccCCCE-EEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC--
Q psy467 90 ---PTVQRTLNGHKSSITSVDFHPYGDY-LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED-- 163 (845)
Q Consensus 90 ---g~~v~~l~~h~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D-- 163 (845)
+... .+.... .+...+|+|+++. +++.+.++.+.+||+.+++.......+ . .+++|+|||++|++++.+
T Consensus 98 ~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEET
T ss_pred cCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCC
Confidence 3322 444332 3557789998863 344444555669999988765554433 2 889999999999988766
Q ss_pred --CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 164 --GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 164 --G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
+.|++ ||+.+++. . .+..+... +
T Consensus 173 ~~~~i~~-------------~d~~~g~~--------------------~-~l~~~~~~-------~-------------- 197 (582)
T 3o4h_A 173 GRVSLFT-------------SNLSSGGL--------------------R-VFDSGEGS-------F-------------- 197 (582)
T ss_dssp TEEEEEE-------------EETTTCCC--------------------E-EECCSSCE-------E--------------
T ss_pred CCeEEEE-------------EcCCCCCc--------------------e-EeecCCCc-------c--------------
Confidence 56777 99887765 2 22333222 2
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC--eEEEEECCCCeEEEEec
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR--TVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG--~I~IWDl~s~~~l~tl~ 319 (845)
..++|+|||+ .|+++..++ .|++||+.+++.. .+.
T Consensus 198 -------------~~~~~SpDG~-----------------------------~l~~~~~~~~~~i~~~d~~~~~~~-~~~ 234 (582)
T 3o4h_A 198 -------------SSASISPGMK-----------------------------VTAGLETAREARLVTVDPRDGSVE-DLE 234 (582)
T ss_dssp -------------EEEEECTTSC-----------------------------EEEEEECSSCEEEEEECTTTCCEE-ECC
T ss_pred -------------ccceECCCCC-----------------------------EEEEccCCCeeEEEEEcCCCCcEE-Ecc
Confidence 4455555555 888888888 8999999999887 777
Q ss_pred CCCCCEEEEE--------EeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEcCCceEEEE------EEEE
Q psy467 320 KNSSTIRRLT--------FSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVTGTQLWFRR------VGTW 384 (845)
Q Consensus 320 gh~~~Vtsla--------fSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafSdg~lLaaS------VsiW 384 (845)
+|...+..++ |||||.++++++.++ ++||++ ++... ...+.|.+++|+++++++++ -.+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~sdg~~l~~~s~~~~p~~l~ 309 (582)
T 3o4h_A 235 LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLWRGKLVTSHTSLSTPPRIV 309 (582)
T ss_dssp CSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEecCCEEEEEEcCCCCCCeEE
Confidence 7877777777 999999999999999 999999 66554 34467899999988877655 4456
Q ss_pred eeCC
Q psy467 385 SHQD 388 (845)
Q Consensus 385 ~~d~ 388 (845)
..+.
T Consensus 310 ~~d~ 313 (582)
T 3o4h_A 310 SLPS 313 (582)
T ss_dssp EETT
T ss_pred EEcC
Confidence 5553
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-17 Score=180.63 Aligned_cols=231 Identities=12% Similarity=0.072 Sum_probs=181.0
Q ss_pred CCcEEEEEEecCCCCEEE-EEeCCCeEEEEECCCCeeEEEecCCCCC---------eEEEEEcCCCCEEEEEE--CCCcE
Q psy467 15 GASVNCLALGKKSGQVLA-TGGDDKKVNLWALGKSNCIMSLSGHSTP---------VESVQFGNGEETLSAGC--QSGSI 82 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~La-Tgs~DG~I~IWdl~t~~~i~~l~~h~~~---------V~sLafSpdg~~LaSgs--~DGtV 82 (845)
...+.+++|+| +|++++ ++..++.|.+||..+++.+..+..+... +.+++|+|+++++++++ .++.|
T Consensus 88 ~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i 166 (353)
T 3vgz_A 88 DLKPFGATINN-TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVI 166 (353)
T ss_dssp SSCCCSEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEE
T ss_pred CCCcceEEECC-CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceE
Confidence 44578899999 777555 4555799999999999988888765432 78999999999888776 47889
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC----CCCCeEEEEEecCCCEEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG----HSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~----h~~~V~sLafSPdg~~La 158 (845)
.+||..+++.+..+..+...+.+++|+|+++++++++.++.|.+||+.+++.+..+.. +...+.+++|+|++++++
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp EEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred EEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 9999999999988875666688999999999999999999999999999998877764 455688899999999877
Q ss_pred EEeCC-CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 159 SGGED-GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 159 sgs~D-G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
+++.+ +.|.+ ||..+++. +..+.... .
T Consensus 247 ~~~~~~~~v~~-------------~d~~~~~~--------------------~~~~~~~~-~------------------ 274 (353)
T 3vgz_A 247 ITDSKAAEVLV-------------VDTRNGNI--------------------LAKVAAPE-S------------------ 274 (353)
T ss_dssp EEESSSSEEEE-------------EETTTCCE--------------------EEEEECSS-C------------------
T ss_pred EEeCCCCEEEE-------------EECCCCcE--------------------EEEEEcCC-C------------------
Confidence 76654 88888 99987776 33322110 0
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t 317 (845)
..++|+|++. . ++++...++.|.+||+.+++.+..
T Consensus 275 -----------------~~~~~s~dg~------------------------~----l~v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 275 -----------------LAVLFNPARN------------------------E----AYVTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp -----------------CCEEEETTTT------------------------E----EEEEETTTTEEEEEETTTTEEEEE
T ss_pred -----------------ceEEECCCCC------------------------E----EEEEECCCCeEEEEECCCCeEEEE
Confidence 2344445444 1 344444789999999999999888
Q ss_pred ecCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy467 318 TEKNSSTIRRLTFSEGGECLLGGDTEG 344 (845)
Q Consensus 318 l~gh~~~VtslafSpdG~~Lasgs~DG 344 (845)
+..+ ..+.+++|+|||++|+++..++
T Consensus 310 ~~~~-~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 310 FDTP-THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred EecC-CCCCeEEEcCCCCEEEEEEccc
Confidence 8754 4689999999999887776653
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-18 Score=186.14 Aligned_cols=274 Identities=9% Similarity=0.066 Sum_probs=178.4
Q ss_pred CCeEEEEEC--CCCeeEE-EecCCCCCeEEEEEcCCCCEEEEEEC---CCcEEEEECCCCc--EEEEEcCCCCCeEEEEE
Q psy467 37 DKKVNLWAL--GKSNCIM-SLSGHSTPVESVQFGNGEETLSAGCQ---SGSIKIWNLAVPT--VQRTLNGHKSSITSVDF 108 (845)
Q Consensus 37 DG~I~IWdl--~t~~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~---DGtV~VWDl~tg~--~v~~l~~h~~~V~~laf 108 (845)
++.|.+|.+ .+++... ....+...+..++|+|+|+ |++++. ++.|.+|++.+++ .+..+..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 456777765 4555433 2334556788899999999 555544 6899999998765 34444456777889999
Q ss_pred ccCCCEEEEEE-CCCeEEEEECCC-C--ceEEEEcCC---------CCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccC
Q psy467 109 HPYGDYLCSGS-LDSFIKLWDLRR-K--GCIYTYRGH---------SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLT 175 (845)
Q Consensus 109 spdg~~Lasgs-~DG~I~IWDl~t-~--~~l~~~~~h---------~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~ 175 (845)
+|+|++|++++ .++.|.+|++.. + ..+..+... ...+.+++|+|||+++++...++.|.+
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~------- 166 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYV------- 166 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEE-------
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEE-------
Confidence 99999998888 679999999963 2 233333211 124889999999996666666888999
Q ss_pred CceeEEEECC-CCccC-----CCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 176 NTSIHVVDLS-LVHPL-----GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 176 ~~~I~vWDl~-tg~~l-----~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
||+. ++... ..........++|+|+|+.+........ .+.++.+...... ....
T Consensus 167 ------~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~-----~v~v~~~~~~~g~------~~~~--- 226 (347)
T 3hfq_A 167 ------YNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS-----QIASLKYDTQTGA------FTQL--- 226 (347)
T ss_dssp ------EEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT-----EEEEEEEETTTTE------EEEE---
T ss_pred ------EEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC-----EEEEEEecCCCCc------eEEe---
Confidence 8887 34321 1112335667999999997665443322 2223332210000 0000
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE-EEEeCCCeEEEEECC---CCeEEEEecCCCCCE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT-TSSSADRTVNFWDLE---KFSLVSTTEKNSSTI 325 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL-atgs~DG~I~IWDl~---s~~~l~tl~gh~~~V 325 (845)
..+...+.+. .....+..++|+|||+ +| +++..++.|.+||+. ..+.+..+..+...+
T Consensus 227 -----~~~~~~~~~~--------~~~~~~~~i~~spdG~-----~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~ 288 (347)
T 3hfq_A 227 -----GIVKTIPADY--------TAHNGAAAIRLSHDGH-----FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFP 288 (347)
T ss_dssp -----EEEESSCTTC--------CSCCEEEEEEECTTSC-----EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCC
T ss_pred -----eeeeecCCCC--------CCCCcceeEEECCCCC-----EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCc
Confidence 0011111110 0113467899999998 55 666678999999997 335666677666778
Q ss_pred EEEEEeCCCCEEEEEeCC-C-EEEEEec--CCceE
Q psy467 326 RRLTFSEGGECLLGGDTE-G-LKVYGWE--PARQY 356 (845)
Q Consensus 326 tslafSpdG~~Lasgs~D-G-I~IWDl~--tgk~l 356 (845)
.+++|+|||++|++++.+ + |.+|+++ +++..
T Consensus 289 ~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 289 RDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 999999999999988876 5 9999654 56544
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.82 E-value=9e-19 Score=210.07 Aligned_cols=289 Identities=10% Similarity=0.006 Sum_probs=193.9
Q ss_pred ceeeee------EEeccCCC---cEEEEEEecCCCCEEEEEeCC---------CeEEEEECCCCeeEEEec---CCCCCe
Q psy467 3 AKVEKA------EDFMAHGA---SVNCLALGKKSGQVLATGGDD---------KKVNLWALGKSNCIMSLS---GHSTPV 61 (845)
Q Consensus 3 irlw~l------~~L~gH~~---~V~~LafSp~dg~~LaTgs~D---------G~I~IWdl~t~~~i~~l~---~h~~~V 61 (845)
+++|++ ..+.+|.. .|.+++||| +|++|++++.+ +.|.+||+.+++. ..+. +|...+
T Consensus 39 i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~ 116 (723)
T 1xfd_A 39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKL 116 (723)
T ss_dssp EEEBCGGGCCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCC
T ss_pred EEEEECCCCcEEEEeccccccccccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccc
Confidence 456653 34555654 499999999 99999999764 7889999998876 3343 345558
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCe------------------EEEEEccCCCEEEEEECCC-
Q psy467 62 ESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI------------------TSVDFHPYGDYLCSGSLDS- 122 (845)
Q Consensus 62 ~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V------------------~~lafspdg~~Lasgs~DG- 122 (845)
.+++|||||++||+++. +.|++||+.+++.......+...+ .+++|+|||++|++++.|+
T Consensus 117 ~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~ 195 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDS 195 (723)
T ss_dssp SBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECT
T ss_pred cccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCC
Confidence 99999999999999975 799999999988776665444333 7899999999999887553
Q ss_pred ---------------------------------eEEEEECCCCceEEEEcCC------CCCeEEEEEecCCCEEEEEeCC
Q psy467 123 ---------------------------------FIKLWDLRRKGCIYTYRGH------SKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 123 ---------------------------------~I~IWDl~t~~~l~~~~~h------~~~V~sLafSPdg~~Lasgs~D 163 (845)
.|++||+.+++....+..+ ...+.+++|+|||+++++....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 275 (723)
T 1xfd_A 196 RVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNR 275 (723)
T ss_dssp TSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEET
T ss_pred ccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcC
Confidence 7999999988765666543 5678999999999988776533
Q ss_pred ----CcEEEeeeeccCCceeEEEECCCCccCCCC---CCCCC----cceeecCCCCeEEEE-ecCCCCCccceeeEeeec
Q psy467 164 ----GVVRIGASFHLTNTSIHVVDLSLVHPLGTP---PPQYT----SSVPFSHNTSLRKSF-TKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 164 ----G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~---~~~~i----~svs~spdg~~l~~~-~~h~~~~~~~~i~V~~i~ 231 (845)
..|.+ ||+.+++..... ...++ ..+.|+|||+.+... ...... ......++
T Consensus 276 ~~~~~~i~~-------------~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~-~~~~~~l~--- 338 (723)
T 1xfd_A 276 AQNVSILTL-------------CDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG-RGKFYHIT--- 338 (723)
T ss_dssp TSCEEEEEE-------------EETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS-SSCEEEEE---
T ss_pred CCCeEEEEE-------------EeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC-CcceeEEE---
Confidence 34555 999888754322 12222 378999999987765 222221 00111121
Q ss_pred ccccccccccchhhhhhccCCCceeEEEc-CCCCcC-CCCcccccccCcee-EEEcCCCCcccceEEEEEeCC---CeEE
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQ-PHRSLN-RSGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSAD---RTVN 305 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fs-pdg~~~-~~~~~~~~~~~I~s-lafSPdg~~~~~~lLatgs~D---G~I~ 305 (845)
.+. ..+... ...........+.. ++|+|||+ .|+..+.+ +.++
T Consensus 339 --------------------------~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~-----~l~~~~~~~~~~~~~ 387 (723)
T 1xfd_A 339 --------------------------VSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGN-----KIYFLSTEDLPRRRQ 387 (723)
T ss_dssp --------------------------EECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTT-----EEEEEESSSCTTCCE
T ss_pred --------------------------EEeccCCCCccceeEeecCCeEEEeeeEEcCCCC-----EEEEEEcCCCCcceE
Confidence 122 111100 00000011122333 68889888 66655544 7899
Q ss_pred EEECCCC--eEEEEecC---CCCCEEEEEEeCCCCEEEEEeC
Q psy467 306 FWDLEKF--SLVSTTEK---NSSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 306 IWDl~s~--~~l~tl~g---h~~~VtslafSpdG~~Lasgs~ 342 (845)
+|++... .....+.. |...+..++|||||++|+....
T Consensus 388 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 388 LYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp EEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred EEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 9987642 23334443 5667899999999999887644
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.3e-19 Score=210.20 Aligned_cols=298 Identities=15% Similarity=0.142 Sum_probs=185.5
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE-EEecCCC-----------------CCeEEEEEcCCCCEEEEEEC
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI-MSLSGHS-----------------TPVESVQFGNGEETLSAGCQ 78 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i-~~l~~h~-----------------~~V~sLafSpdg~~LaSgs~ 78 (845)
.+..+.|+ |+.+++++.++ | +||+.+++.+ ..+..|. ..|.+++|+|| ..++.+.
T Consensus 27 ~~~~~~w~---g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~- 99 (706)
T 2z3z_A 27 YVVGLQWM---GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT- 99 (706)
T ss_dssp -CTTCEEE---TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-
T ss_pred cCCCCcCc---CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-
Confidence 35567786 56677777787 8 9999998873 3333332 57999999999 6666664
Q ss_pred CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-----CceEEEEcCCCCC---------
Q psy467 79 SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-----KGCIYTYRGHSKS--------- 144 (845)
Q Consensus 79 DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-----~~~l~~~~~h~~~--------- 144 (845)
++.|++||+.+++..... .+...+.+++|+|||++|+++ .++.|++||+.+ ++.......+...
T Consensus 100 ~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 100 QGGLVGFDMLARKVTYLF-DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp TTEEEEEETTTTEEEEEE-CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred CCEEEEEECCCCceEEcc-CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence 699999999988765544 466778899999999999885 689999999988 7766544433332
Q ss_pred -----eEEEEEecCCCEEEEEeCCC-cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCC
Q psy467 145 -----INSIRFSPDGQWIASGGEDG-VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRP 218 (845)
Q Consensus 145 -----V~sLafSPdg~~Lasgs~DG-~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~ 218 (845)
+.+++|+|||++|++++.|. .+.. ..+.+...... ......-...
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~----------~~~~~~~~~~~-------------------~~~~~~y~~~ 228 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKP----------TPIVDYHPLEA-------------------ESKPLYYPMA 228 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCC----------EEEEECCSSSC-------------------EEEEECCCBT
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCce----------EEeeccCCCCC-------------------ceEEeeCCCC
Confidence 47899999999999887331 1111 00011111000 0000000000
Q ss_pred --CCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 219 --GGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 219 --~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
......+.++++... ....... ...+...+..++|+|||+ .|+
T Consensus 229 g~~~~~~~l~~~d~~~~---------------------~~~~~~~---------~~~~~~~~~~~~~spdg~-----~l~ 273 (706)
T 2z3z_A 229 GTPSHHVTVGIYHLATG---------------------KTVYLQT---------GEPKEKFLTNLSWSPDEN-----ILY 273 (706)
T ss_dssp TSCCCEEEEEEEETTTT---------------------EEEECCC---------CSCTTCEEEEEEECTTSS-----EEE
T ss_pred CCCCCeeEEEEEECCCC---------------------ceEeecc---------CCCCceeEeeEEEECCCC-----EEE
Confidence 000001111111000 0000000 001123456777777777 788
Q ss_pred EEeCCC-----eEEEEECCCCeEEEEec--CCCC---CEEEEEEeC--CCCEEEEEeCCC-EEEEEec-CCceEEEecCC
Q psy467 297 SSSADR-----TVNFWDLEKFSLVSTTE--KNSS---TIRRLTFSE--GGECLLGGDTEG-LKVYGWE-PARQYDAQPMG 362 (845)
Q Consensus 297 tgs~DG-----~I~IWDl~s~~~l~tl~--gh~~---~VtslafSp--dG~~Lasgs~DG-I~IWDl~-tgk~l~tl~~h 362 (845)
+++.++ .|++||+.+++....+. .+.. .+.+++|+| ||++|++++.++ ++||.++ +++.+..+..|
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~ 353 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG 353 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS
T ss_pred EEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC
Confidence 877665 89999999984333332 2222 346789999 999999999998 9999987 67778888888
Q ss_pred CCCeEE-EEEc-CCceEEEE--------EEEEeeC
Q psy467 363 WGKVQD-LAVT-GTQLWFRR--------VGTWSHQ 387 (845)
Q Consensus 363 ~~~Vts-VafS-dg~lLaaS--------VsiW~~d 387 (845)
...+.+ ++|+ +|+.|+++ +.+|..+
T Consensus 354 ~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 354 EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 888877 7999 88877655 3666654
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-17 Score=179.78 Aligned_cols=264 Identities=12% Similarity=0.132 Sum_probs=178.9
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCC----CeEEEEECCC--Ce--eEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDD----KKVNLWALGK--SN--CIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKI 84 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~D----G~I~IWdl~t--~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~V 84 (845)
|...+..++|+| +|++|++++.+ +.|.+|++.. ++ .+.....+......+++ ++++|++++ .++.|.+
T Consensus 48 ~~~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 677888999999 89999998875 7999998865 43 33444445667888888 788887776 5789999
Q ss_pred EECCCCcEEEE----E--cC--------CCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCc-------e------EE
Q psy467 85 WNLAVPTVQRT----L--NG--------HKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKG-------C------IY 136 (845)
Q Consensus 85 WDl~tg~~v~~----l--~~--------h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~-------~------l~ 136 (845)
|++.....+.. + .+ +...+.+++|+|+|+++++++ .++.|.+|++.... . ..
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 99975432211 1 11 123358899999999776665 47899999987543 1 11
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~ 215 (845)
........+.+++|+|||+++++++ .++.|.+ ||+.++... .+..+..
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v-------------~~~~~g~~~------------------~~~~~~~ 253 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIA-------------FRYADGMLD------------------EIQTVAA 253 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEE-------------EEEETTEEE------------------EEEEEES
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEE-------------EEecCCceE------------------EeEEEec
Confidence 1223455688999999999888777 5889999 998755430 0111110
Q ss_pred CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 216 GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 216 h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
.+.+. .....++|+|||+ +|
T Consensus 254 --------------------------------------------~~~~~-----------~~~~~i~~spdg~-----~l 273 (361)
T 3scy_A 254 --------------------------------------------DTVNA-----------QGSGDIHLSPDGK-----YL 273 (361)
T ss_dssp --------------------------------------------CSSCC-----------CCEEEEEECTTSS-----EE
T ss_pred --------------------------------------------CCCCC-----------CCcccEEECCCCC-----EE
Confidence 01000 1224566666666 66
Q ss_pred EEEeC--CCeEEEEECC--CCe--EEEEecCCCCCEEEEEEeCCCCEEEEEeC-CC-EEEEEec--CCceEEEec-CCCC
Q psy467 296 TSSSA--DRTVNFWDLE--KFS--LVSTTEKNSSTIRRLTFSEGGECLLGGDT-EG-LKVYGWE--PARQYDAQP-MGWG 364 (845)
Q Consensus 296 atgs~--DG~I~IWDl~--s~~--~l~tl~gh~~~VtslafSpdG~~Lasgs~-DG-I~IWDl~--tgk~l~tl~-~h~~ 364 (845)
+++.. ++.|.+|++. +++ .+..+.. ...+.+++|+|||++|++++. ++ |.+|.++ +++...... .+..
T Consensus 274 ~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~ 352 (361)
T 3scy_A 274 YASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVD 352 (361)
T ss_dssp EEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECS
T ss_pred EEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCC
Confidence 55554 5899999985 444 4555554 557889999999999999884 45 9997665 566544332 2446
Q ss_pred CeEEEEEc
Q psy467 365 KVQDLAVT 372 (845)
Q Consensus 365 ~VtsVafS 372 (845)
.+.+++|.
T Consensus 353 ~p~~v~~~ 360 (361)
T 3scy_A 353 KPVCLKFV 360 (361)
T ss_dssp SEEEEEEE
T ss_pred CCeEEEEc
Confidence 78898885
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.9e-18 Score=204.14 Aligned_cols=322 Identities=10% Similarity=0.056 Sum_probs=206.3
Q ss_pred EEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCC---CeEEEEEcCCCCEEEEEEC---------CCcEEEEE
Q psy467 19 NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST---PVESVQFGNGEETLSAGCQ---------SGSIKIWN 86 (845)
Q Consensus 19 ~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~---~V~sLafSpdg~~LaSgs~---------DGtV~VWD 86 (845)
.+++|+| +|+++++ +.|+.|++||+.+++....+.+|.. .+.+++|||||++|++++. ++.|++||
T Consensus 19 ~~~~~s~-dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 19 FFPNWIS-GQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCCEESS-SSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CccEECC-CCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 3789999 8865554 4699999999999988777765543 4899999999999999876 68999999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE-cCCCCCe-----------------EEE
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-RGHSKSI-----------------NSI 148 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~h~~~V-----------------~sL 148 (845)
+.+++.+.... ....+..++|+|||+.|+.+. ++.|++||+.+++..... .++...+ .++
T Consensus 97 ~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 97 LSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 99887621111 235688999999999999886 789999999887765432 2222222 489
Q ss_pred EEecCCCEEEEEeCC-CcEEEeeee--------------------ccCCceeEEEECCCCccC---CC-------CCCCC
Q psy467 149 RFSPDGQWIASGGED-GVVRIGASF--------------------HLTNTSIHVVDLSLVHPL---GT-------PPPQY 197 (845)
Q Consensus 149 afSPdg~~Lasgs~D-G~I~I~~~~--------------------~~~~~~I~vWDl~tg~~l---~~-------~~~~~ 197 (845)
+|||||++|++++.| +.+.++... ......+++||+.+++.. .. .+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 999999999988765 222221100 011236777999987642 11 12345
Q ss_pred CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccc-----
Q psy467 198 TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCV----- 272 (845)
Q Consensus 198 i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~----- 272 (845)
+..++|+||++++......... ...+.++++... ..... .....
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~--~~~l~~~d~~~~---------------------------~~~g~--~~~~~~~~~~ 303 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQN--VSVLSICDFRED---------------------------WQTWD--CPKTQEHIEE 303 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTT--EEEEEEEEECSS---------------------------SSSEE--CCGGGEEEEE
T ss_pred EEEeEEeCCCeEEEEEeccccC--eEEEEEEcccCC---------------------------CCCCc--eEEEEecccc
Confidence 6789999998766553332211 111212110000 00000 00000
Q ss_pred ccccCce-----eEEEcCCCCcccceEEEEEeCCC--eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC--
Q psy467 273 PVSVSRT-----SLSILPQSPMLCFILTTSSSADR--TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-- 343 (845)
Q Consensus 273 ~~~~~I~-----slafSPdg~~~~~~lLatgs~DG--~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D-- 343 (845)
.+...+. .++|+|||+.+ +++++..+| .|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+
T Consensus 304 ~~~~~~~~~~~~~~~~spdg~~l---~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~ 378 (719)
T 1z68_A 304 SRTGWAGGFFVSTPVFSYDAISY---YKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFE 378 (719)
T ss_dssp CSSSCSSSSSCCCCEECTTSSCE---EEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGG
T ss_pred cCCceEccccCCccEECCCCCeE---EEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCC
Confidence 0112233 67888888831 222344555 57778887766 44555556678888888 88888777655
Q ss_pred ---C-EEEEEecC--Cc-eEEEec----CCCCCeEEEEEc-CCceEEEE
Q psy467 344 ---G-LKVYGWEP--AR-QYDAQP----MGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 344 ---G-I~IWDl~t--gk-~l~tl~----~h~~~VtsVafS-dg~lLaaS 380 (845)
+ +++|.+.. +. ....+. +|...+..+.|+ ++++++.+
T Consensus 379 ~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~ 427 (719)
T 1z68_A 379 EYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALV 427 (719)
T ss_dssp GCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEE
T ss_pred CCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEE
Confidence 5 88998875 32 123333 266788899999 88877754
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=184.42 Aligned_cols=283 Identities=11% Similarity=0.003 Sum_probs=191.2
Q ss_pred eEEeccCCCcEEE-----EEEecCCCCEEEEEeC-CC--eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC
Q psy467 8 AEDFMAHGASVNC-----LALGKKSGQVLATGGD-DK--KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS 79 (845)
Q Consensus 8 l~~L~gH~~~V~~-----LafSp~dg~~LaTgs~-DG--~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D 79 (845)
+..+..|...+.. .+||| +|++|++++. +| .|.+||+.+++......++...+..++|+|||+.|+.++.+
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred eEEecCCcccccchhhcCccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 5678888877776 89999 9999998887 66 48888999988877777776666678899999999999999
Q ss_pred CcEEEEECCCCcEEEEEcCCCCCeEEEE--EccCCCEEEEEE----------------------CCCeEEEEECCCCceE
Q psy467 80 GSIKIWNLAVPTVQRTLNGHKSSITSVD--FHPYGDYLCSGS----------------------LDSFIKLWDLRRKGCI 135 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~~h~~~V~~la--fspdg~~Lasgs----------------------~DG~I~IWDl~t~~~l 135 (845)
+.|.+||+.+++....+..+...+.... +++++++++... .++.|.+||+.+++..
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST 181 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence 9999999999987776665665554444 489999887432 3467999999988654
Q ss_pred EEEcCCCCCeEEEEEec-CCCEEEEEeCCC------cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 136 YTYRGHSKSINSIRFSP-DGQWIASGGEDG------VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 136 ~~~~~h~~~V~sLafSP-dg~~Lasgs~DG------~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
. +..+...+..++|+| ||+.|+.+..++ .|.+ +|...+..
T Consensus 182 ~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~-------------~d~~~~~~------------------- 228 (388)
T 3pe7_A 182 V-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWL-------------INEDGTNM------------------- 228 (388)
T ss_dssp E-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEE-------------EETTSCCC-------------------
T ss_pred E-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEE-------------EeCCCCce-------------------
Confidence 4 434666789999999 999988776532 4444 77654433
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSP 288 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~ 288 (845)
..+..+... ..+..++|+|||+
T Consensus 229 --~~l~~~~~~--------------------------------------------------------~~~~~~~~spdg~ 250 (388)
T 3pe7_A 229 --RKVKTHAEG--------------------------------------------------------ESCTHEFWVPDGS 250 (388)
T ss_dssp --EESCCCCTT--------------------------------------------------------EEEEEEEECTTSS
T ss_pred --EEeeeCCCC--------------------------------------------------------cccccceECCCCC
Confidence 111111100 0122334455554
Q ss_pred cccceEEEE-EeCCC----eEEEEECCCCeEE--EEecCCCCC---EEEEEEeCCCCEEEEE---------eCCC-EEEE
Q psy467 289 MLCFILTTS-SSADR----TVNFWDLEKFSLV--STTEKNSST---IRRLTFSEGGECLLGG---------DTEG-LKVY 348 (845)
Q Consensus 289 ~~~~~lLat-gs~DG----~I~IWDl~s~~~l--~tl~gh~~~---VtslafSpdG~~Lasg---------s~DG-I~IW 348 (845)
.|+. +..++ .|++||+.+++.. ..+.++... ...++|+|||+.|+.. ..+. |++|
T Consensus 251 -----~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 251 -----ALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp -----CEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred -----EEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 4433 32222 3999999988743 333331000 1123799999988864 3344 9999
Q ss_pred EecCCceEEEecCCCC-----------CeEEEEEc-CCceEEEE------EEEEeeCC
Q psy467 349 GWEPARQYDAQPMGWG-----------KVQDLAVT-GTQLWFRR------VGTWSHQD 388 (845)
Q Consensus 349 Dl~tgk~l~tl~~h~~-----------~VtsVafS-dg~lLaaS------VsiW~~d~ 388 (845)
|+.+++. ..+..+.. .+.+++|+ ||+.|+.+ ..+|.++.
T Consensus 326 d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 326 NMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp ETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred eccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 9988765 44555554 57889999 99877765 55665543
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-18 Score=193.64 Aligned_cols=153 Identities=16% Similarity=0.242 Sum_probs=127.1
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----------eeEEE-----ecCCCCCeEEEEEcCCCCEEE----
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----------NCIMS-----LSGHSTPVESVQFGNGEETLS---- 74 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----------~~i~~-----l~~h~~~V~sLafSpdg~~La---- 74 (845)
+...++++++++ ++.++++++.++ +++|+.... ..+.. ...+...|.+++|+|++++|+
T Consensus 35 ~~~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 35 PKERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CCSCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 345689999999 888999999887 888875210 01111 113567899999999999999
Q ss_pred EEECCCcEEEEECCCC--------c---EEEEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEEcCCC
Q psy467 75 AGCQSGSIKIWNLAVP--------T---VQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142 (845)
Q Consensus 75 Sgs~DGtV~VWDl~tg--------~---~v~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~ 142 (845)
+|+.|+.|++||+.++ + .+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+....+|.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 7788999999998754 1 24556679999999999998 7899999999999999999987777777788
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 143 KSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 143 ~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..|.+++|+|+|++|++|+.||.|++
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~i 218 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQ 218 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEE
Confidence 89999999999999999999999999
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-16 Score=171.05 Aligned_cols=275 Identities=9% Similarity=0.135 Sum_probs=178.5
Q ss_pred CCEEEEEe----CCCeEEEEEC--CCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC----CcEEEEECCC--Cc--EE
Q psy467 28 GQVLATGG----DDKKVNLWAL--GKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS----GSIKIWNLAV--PT--VQ 93 (845)
Q Consensus 28 g~~LaTgs----~DG~I~IWdl--~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D----GtV~VWDl~t--g~--~v 93 (845)
..++++|+ .++.|.+|.+ .+++.......+...+..++|+|++++|++++.+ +.|.+|++.. ++ .+
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 34566664 4568999976 4554433222267778889999999999999875 7999998875 43 33
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEE------EcC--------CCCCeEEEEEecCCCEEE
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYT------YRG--------HSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~------~~~--------h~~~V~sLafSPdg~~La 158 (845)
.....+......+++ ++++|++++ .++.|.+|++.....+.. ..+ +...+.+++|+|||++++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 344445556777888 788887776 578999999975432211 111 123458899999999776
Q ss_pred EEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC-eEEEEecCCCCCccceeeEeeecccccc
Q psy467 159 SGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS-LRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 159 sgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~-~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+++ .++.+.+ |++......... + +... + . .
T Consensus 171 ~~~~~~~~v~v-------------~~~~~~~~~~~~--------------~~l~~~--~---~-------~--------- 202 (361)
T 3scy_A 171 ADDLGTDQIHK-------------FNINPNANADNK--------------EKFLTK--G---T-------P--------- 202 (361)
T ss_dssp EEETTTTEEEE-------------EEECTTCCTTTC--------------CCCEEE--E---E-------E---------
T ss_pred EEeCCCCEEEE-------------EEEcCCCCcccc--------------cceeec--c---c-------c---------
Confidence 665 4788888 887643210000 0 0000 0 0 0
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCeE-
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFSL- 314 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~~- 314 (845)
.....+.+ .....++|+|||+ ++++++ .++.|.+||+.+++.
T Consensus 203 -------------------~~~~~~~~------------~~~~~~~~spdg~-----~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 203 -------------------EAFKVAPG------------SGPRHLIFNSDGK-----FAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp -------------------EEEECCTT------------CCEEEEEECTTSS-----EEEEEETTTCEEEEEEEETTEEE
T ss_pred -------------------cceecCCC------------CCCeEEEEcCCCC-----EEEEEcCCCCeEEEEEecCCceE
Confidence 00000011 1234566666665 666655 689999999987754
Q ss_pred -EEEec---CCCCCEEEEEEeCCCCEEEEEeCC--C-EEEEEec--CCc--eEEEecCCCCCeEEEEEc-CCceEEEE--
Q psy467 315 -VSTTE---KNSSTIRRLTFSEGGECLLGGDTE--G-LKVYGWE--PAR--QYDAQPMGWGKVQDLAVT-GTQLWFRR-- 380 (845)
Q Consensus 315 -l~tl~---gh~~~VtslafSpdG~~Lasgs~D--G-I~IWDl~--tgk--~l~tl~~h~~~VtsVafS-dg~lLaaS-- 380 (845)
+..+. .+.....+++|+|||++|+++..+ + |.+|+++ +++ .+..+.. ...+.+++|+ +|++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence 33332 334567899999999999877765 5 9999996 454 4445554 5678999999 99988777
Q ss_pred ----EEEEeeCCC
Q psy467 381 ----VGTWSHQDS 389 (845)
Q Consensus 381 ----VsiW~~d~~ 389 (845)
+.+|.++..
T Consensus 326 ~~~~v~v~~~d~~ 338 (361)
T 3scy_A 326 DTNVIQIFERDQA 338 (361)
T ss_dssp TTTEEEEEEECTT
T ss_pred CCCCEEEEEEECC
Confidence 888877643
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=3.5e-17 Score=198.38 Aligned_cols=309 Identities=12% Similarity=0.095 Sum_probs=188.6
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCC-----eEEEEEcCCCCEEEEEECC---------C
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP-----VESVQFGNGEETLSAGCQS---------G 80 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~-----V~sLafSpdg~~LaSgs~D---------G 80 (845)
.....+++|+| +|++++++ |+.|++||+.+++....+.+|... ...++|||||++|+.++.+ +
T Consensus 16 ~~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 16 RLKLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 34567899999 88888886 899999999999988888877643 2347899999999998875 5
Q ss_pred cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE-cCCCCCe--------------
Q psy467 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-RGHSKSI-------------- 145 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~h~~~V-------------- 145 (845)
.+.+||+.+++.. .+..+...+...+|||||+.||.+. ++.|++||+.++...+.. .++...+
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 6779999998754 4666778899999999999998885 689999999887754322 2222222
Q ss_pred ---EEEEEecCCCEEEEEeCCCc-EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCc
Q psy467 146 ---NSIRFSPDGQWIASGGEDGV-VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGT 221 (845)
Q Consensus 146 ---~sLafSPdg~~Lasgs~DG~-I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~ 221 (845)
..+.|||||++||.++.|.. +.+ |++....... ........+.+...|... .
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~-------------~~~~~~~~~~-~~~~~~~~~~yp~~G~~~----------~ 226 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPL-------------IEYSFYSDES-LQYPKTVRVPYPKAGAVN----------P 226 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCE-------------EEEEECCSTT-CSSCEEEEEECCBTTSCC----------C
T ss_pred CCCcceEECCCCCEEEEEEEcccCCce-------------EEEEeecCCC-CCCCcceeecCCCCcCcC----------C
Confidence 35899999999998875543 666 5543211100 001111222232222110 0
Q ss_pred cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC-
Q psy467 222 KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA- 300 (845)
Q Consensus 222 ~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~- 300 (845)
...+.++++..... +.......+.... ....+...+..++|+|||+ +++....
T Consensus 227 ~~~l~v~d~~~~~~---------------~~~~~~~~l~~~~------~~~~~~~~~~~~~wspdg~-----~~~~~~~r 280 (740)
T 4a5s_A 227 TVKFFVVNTDSLSS---------------VTNATSIQITAPA------SMLIGDHYLCDVTWATQER-----ISLQWLRR 280 (740)
T ss_dssp EEEEEEEETTSCCS---------------SSCCCEEEECCCH------HHHTSCEEEEEEEEEETTE-----EEEEEEES
T ss_pred eeEEEEEECCCCCC---------------CCcceEEEecCCc------cCCCCCeEEEEEEEeCCCe-----EEEEEeCC
Confidence 01111222211000 0000000111000 0001223467788888887 5554432
Q ss_pred ---CCeEEEEECCCCe----EEE--Ee--cCCCCCEE-----EEEEeCCCCEEE-EEe-CCC---EEEEEecCCceEEEe
Q psy467 301 ---DRTVNFWDLEKFS----LVS--TT--EKNSSTIR-----RLTFSEGGECLL-GGD-TEG---LKVYGWEPARQYDAQ 359 (845)
Q Consensus 301 ---DG~I~IWDl~s~~----~l~--tl--~gh~~~Vt-----slafSpdG~~La-sgs-~DG---I~IWDl~tgk~l~tl 359 (845)
+..|++||+.+++ +.. .+ .+|...|. .++|+|||+.|+ ..+ .+| |.+|+.++++.. .+
T Consensus 281 ~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~l 359 (740)
T 4a5s_A 281 IQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FI 359 (740)
T ss_dssp STTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ES
T ss_pred CCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ec
Confidence 3479999998886 321 12 34665554 789999999877 665 444 888888776654 44
Q ss_pred cCCCCCeEEEEEcCCceEEE
Q psy467 360 PMGWGKVQDLAVTGTQLWFR 379 (845)
Q Consensus 360 ~~h~~~VtsVafSdg~lLaa 379 (845)
......|..+.+-|++.|+.
T Consensus 360 T~g~~~v~~~~~~d~~~i~f 379 (740)
T 4a5s_A 360 TKGTWEVIGIEALTSDYLYY 379 (740)
T ss_dssp CCSSSCEEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEEEeCCEEEE
Confidence 44445566554334554443
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-15 Score=169.34 Aligned_cols=298 Identities=9% Similarity=0.044 Sum_probs=195.5
Q ss_pred CCCEEEEEe------CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC----------CCcEEEEECCCC
Q psy467 27 SGQVLATGG------DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ----------SGSIKIWNLAVP 90 (845)
Q Consensus 27 dg~~LaTgs------~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~----------DGtV~VWDl~tg 90 (845)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+||+++|++++. ++.|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 556666654 3679999999999998888776655 8999999999998863 577999999999
Q ss_pred cEEEEEcCC------CCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCC-CEEEEE
Q psy467 91 TVQRTLNGH------KSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDG-QWIASG 160 (845)
Q Consensus 91 ~~v~~l~~h------~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg-~~Lasg 160 (845)
+.+..+... ......++|+|||++|+++.. ++.|.+||+.+++.+.. +.. . ....+.+.|++ ..+++.
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~ 169 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTI 169 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEE
Confidence 988887532 245678999999999998874 57999999999988877 542 2 23446677765 567788
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCC-CccC------CCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSL-VHPL------GTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l------~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
+.||.+.+ |+... ++.. .... ......+.+++++..+.... .... +.+.++..
T Consensus 170 ~~dg~~~~-------------v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~-----v~v~d~~~ 230 (361)
T 2oiz_A 170 CGDGGLLT-------------INLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVS-YYGN-----VYSADFSG 230 (361)
T ss_dssp ETTSSEEE-------------EEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEB-TTSE-----EEEEECSS
T ss_pred CCCCcEEE-------------EEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEe-CCCe-----EEEEEecC
Confidence 88998888 65543 2221 0000 11111223344444332221 1111 11111100
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC-----------C
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA-----------D 301 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~-----------D 301 (845)
..... .....+... ......|.| .....++|+|+++ .+.++.. .
T Consensus 231 ~~~~~--~~~~~~~~~----~~~~~~~~p--------------~g~~~~a~~~dg~-----~lyv~~~~~~~~~~~~~~~ 285 (361)
T 2oiz_A 231 DEVKV--DGPWSLLND----EDKAKNWVP--------------GGYNLVGLHRASG-----RMYVFMHPDGKEGTHKFPA 285 (361)
T ss_dssp SSCEE--EEEEESCCH----HHHHTTCEE--------------CCSSCEEEETTTT-----EEEEEEESSCCTTCTTCCC
T ss_pred CCcee--cccccccCc----ccccccccc--------------CCeeEEEEecCCC-----eEEEEEccCCCcccccCCC
Confidence 00000 000000000 000000011 1122367888876 4444322 3
Q ss_pred CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC--ceEEEecCCCCCeEEEEEc-CCc
Q psy467 302 RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA--RQYDAQPMGWGKVQDLAVT-GTQ 375 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg--k~l~tl~~h~~~VtsVafS-dg~ 375 (845)
+.|.+||+.+++.+.++..+. +.+++|+|||++|++++. + |.+||..++ +.+.++..+......++++ +|+
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 589999999999999999876 999999999999999887 6 999999999 9999987777888999999 765
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.3e-17 Score=195.12 Aligned_cols=287 Identities=10% Similarity=0.062 Sum_probs=187.8
Q ss_pred cEEEEEEecCCCCEEEEEeC---------CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 17 SVNCLALGKKSGQVLATGGD---------DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~---------DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.|.+++||| +|++||+++. ++.|++||+.+++.+... .....+.+++|||||+.||++. ++.|++|++
T Consensus 61 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 61 NASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp TCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred ceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 399999999 9999998876 689999999988763111 1235688999999999999985 789999999
Q ss_pred CCCcEEEEE-cCCCCCe-----------------EEEEEccCCCEEEEEECCC---------------------------
Q psy467 88 AVPTVQRTL-NGHKSSI-----------------TSVDFHPYGDYLCSGSLDS--------------------------- 122 (845)
Q Consensus 88 ~tg~~v~~l-~~h~~~V-----------------~~lafspdg~~Lasgs~DG--------------------------- 122 (845)
.+++..... .++...| .+++|+|||++|++++.|.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 988765433 2222222 4899999999999987652
Q ss_pred -------eEEEEECCCCceE--EE------EcCCCCCeEEEEEecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEE
Q psy467 123 -------FIKLWDLRRKGCI--YT------YRGHSKSINSIRFSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVD 183 (845)
Q Consensus 123 -------~I~IWDl~t~~~l--~~------~~~h~~~V~sLafSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWD 183 (845)
.|++||+.+++.. .. +..|...+.+++|+||++++++....+ .|.+ ||
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~-------------~d 284 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSI-------------CD 284 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEE-------------EE
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEE-------------Ec
Confidence 7889999887642 11 235777899999999987776644322 2555 89
Q ss_pred ----CCCCccCCCC------CCCCCc-----ceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 184 ----LSLVHPLGTP------PPQYTS-----SVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 184 ----l~tg~~l~~~------~~~~i~-----svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
+.+++..... +..++. .+.|+|||+.+......... ...+
T Consensus 285 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g----~~~l--------------------- 339 (719)
T 1z68_A 285 FREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG----YKHI--------------------- 339 (719)
T ss_dssp ECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS----CEEE---------------------
T ss_pred ccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC----ceEE---------------------
Confidence 7776654433 234444 78899999976654332222 1112
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC-----CCeEEEEECCC--Ce-EEEEec-
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA-----DRTVNFWDLEK--FS-LVSTTE- 319 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~-----DG~I~IWDl~s--~~-~l~tl~- 319 (845)
..+..++.. ..........+..+.++ +++ .++..+. ++.+++|.+.. +. ....+.
T Consensus 340 --------~~~~~~~~~--~~~lt~~~~~v~~~~~~-d~~-----~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~ 403 (719)
T 1z68_A 340 --------HYIKDTVEN--AIQITSGKWEAINIFRV-TQD-----SLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTC 403 (719)
T ss_dssp --------EEESSCSTT--CEECSCSSSCEEEEEEE-CSS-----EEEEEESCGGGCTTCBEEEEEECSSSSCCEEESST
T ss_pred --------EEEECCCCc--eEecccCceEEEEEEEE-eCC-----EEEEEEecCCCCCceEEEEEEeCCCCCCCceeccC
Confidence 112221110 00011112335556666 666 4544444 47788887653 42 123333
Q ss_pred ---CCCCCEEEEEEeCCCCEEEE-EeCCC---EEEEEecCCceEEEec
Q psy467 320 ---KNSSTIRRLTFSEGGECLLG-GDTEG---LKVYGWEPARQYDAQP 360 (845)
Q Consensus 320 ---gh~~~VtslafSpdG~~Las-gs~DG---I~IWDl~tgk~l~tl~ 360 (845)
+|...+..+.|+|+|++++. ++... +.+||+.+++++..+.
T Consensus 404 ~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~~ 451 (719)
T 1z68_A 404 HLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILE 451 (719)
T ss_dssp TTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEee
Confidence 25567889999999988774 33332 8999998887665543
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-15 Score=162.44 Aligned_cols=256 Identities=11% Similarity=0.068 Sum_probs=180.8
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCC--CeEEEEEccCCCEEE-EEECCCeEEEEECCCCceEEEEcCCC-----
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS--SITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHS----- 142 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~--~V~~lafspdg~~La-sgs~DG~I~IWDl~t~~~l~~~~~h~----- 142 (845)
++|++++.++.|.+||+.+++.+..+..... .+.+++|+|++++++ +++.++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4789999999999999999998888863322 478999999998765 45567899999999998887765321
Q ss_pred CCeEEEEEecCCCEEEEEe------------CCCcEEEeeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCe
Q psy467 143 KSINSIRFSPDGQWIASGG------------EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSL 209 (845)
Q Consensus 143 ~~V~sLafSPdg~~Lasgs------------~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~ 209 (845)
..+.+++|+|+|+++++++ .++.|.+ ||+.+++...... ...+..++|+|+++.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v-------------~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL-------------YDAETLSRRKAFEAPRQITMLAWARDGSK 148 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE-------------EETTTTEEEEEEECCSSCCCEEECTTSSC
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEE-------------EECCCCcEEEEEeCCCCcceeEECCCCCE
Confidence 2577899999999988886 5678888 9998876644332 445678899999987
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCc
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~ 289 (845)
+.... . .+.++++.... ....+.... ....++|+|++..
T Consensus 149 l~~~~---~-----~i~~~d~~~~~--------------------~~~~~~~~~-------------~~~~~~~s~dg~~ 187 (337)
T 1pby_B 149 LYGLG---R-----DLHVMDPEAGT--------------------LVEDKPIQS-------------WEAETYAQPDVLA 187 (337)
T ss_dssp EEEES---S-----SEEEEETTTTE--------------------EEEEECSTT-------------TTTTTBCCCBCCC
T ss_pred EEEeC---C-----eEEEEECCCCc--------------------Eeeeeeccc-------------cCCCceeCCCccE
Confidence 76541 1 12232221100 000111110 0112367888873
Q ss_pred ccceEEEEEeCCC-----------------------eEEEEECCCCeEE-EEecCCCCCEEEEEEeCCCCEEEEEeCCC-
Q psy467 290 LCFILTTSSSADR-----------------------TVNFWDLEKFSLV-STTEKNSSTIRRLTFSEGGECLLGGDTEG- 344 (845)
Q Consensus 290 ~~~~lLatgs~DG-----------------------~I~IWDl~s~~~l-~tl~gh~~~VtslafSpdG~~Lasgs~DG- 344 (845)
+++++..++ .|.+||+.+++.. ..+..+...+.+++|+|||++|+++ ++
T Consensus 188 ----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~ 261 (337)
T 1pby_B 188 ----VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV 261 (337)
T ss_dssp ----CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE
T ss_pred ----EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe
Confidence 222222222 4789999998764 2334566678999999999999988 56
Q ss_pred EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 345 LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 345 I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
|.+||+.+++.+..+..+ ..+.+++|+ +|++++++ +.+|...
T Consensus 262 v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 262 LESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred EEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 999999999888777643 567899999 89888777 8888654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.6e-16 Score=169.35 Aligned_cols=252 Identities=13% Similarity=0.160 Sum_probs=162.7
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeC--CCeEEEEECCCCe--eEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEE
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGD--DKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIW 85 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~--DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VW 85 (845)
...+...+..++|+| +|++++++.. ++.|.+|++.+++ .+..+..+...+..++|+|+|++|++++ .++.|.+|
T Consensus 35 ~~~~~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 35 LLAATQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EEEECSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eeeccCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 345667788999999 8884444432 6899999997765 4445455778889999999999998888 67999999
Q ss_pred ECCC-C--cEEEEEcC---------CCCCeEEEEEccCCCEEEEEECCCeEEEEECC-CCceEE--EEcC-CCCCeEEEE
Q psy467 86 NLAV-P--TVQRTLNG---------HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR-RKGCIY--TYRG-HSKSINSIR 149 (845)
Q Consensus 86 Dl~t-g--~~v~~l~~---------h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~-t~~~l~--~~~~-h~~~V~sLa 149 (845)
++.. + ..+..+.. +...+.+++|+|+|+.+++...++.|.+|++. +++... .+.. ....+..++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 9963 3 33333321 12248899999999966666678899999998 454332 2222 233678899
Q ss_pred EecCCCEEEEE-eCCCcEEEeeeeccCCceeEEEECCC--Ccc-----CCCCC-----CCCCcceeecCCCCeEEEEecC
Q psy467 150 FSPDGQWIASG-GEDGVVRIGASFHLTNTSIHVVDLSL--VHP-----LGTPP-----PQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 150 fSPdg~~Lasg-s~DG~I~I~~~~~~~~~~I~vWDl~t--g~~-----l~~~~-----~~~i~svs~spdg~~l~~~~~h 216 (845)
|+|||++++++ ..++.+.+ |++.. ++. +.... ......++|+|+|+.+......
T Consensus 194 ~spdg~~l~v~~~~~~~v~v-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~ 260 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIAS-------------LKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG 260 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEE-------------EEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET
T ss_pred ECCCCCEEEEEeCCCCEEEE-------------EEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC
Confidence 99999976664 56788888 76653 321 11111 1346679999999977554332
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
.. .+.++++..... . ..+...+. ....+..++|+|||+ +|+
T Consensus 261 ~~-----~v~v~~~~~~g~-------~-----------~~~~~~~~-----------~~~~~~~~~~spdg~-----~l~ 301 (347)
T 3hfq_A 261 YN-----TLAVFAVTADGH-------L-----------TLIQQIST-----------EGDFPRDFDLDPTEA-----FVV 301 (347)
T ss_dssp TT-----EEEEEEECGGGC-------E-----------EEEEEEEC-----------SSSCCCEEEECTTSS-----EEE
T ss_pred CC-----EEEEEEECCCCc-------E-----------EEeEEEec-----------CCCCcCeEEECCCCC-----EEE
Confidence 22 233433321000 0 11111111 112457888999998 677
Q ss_pred EEeC-CCeEEEE--ECCCCeEE
Q psy467 297 SSSA-DRTVNFW--DLEKFSLV 315 (845)
Q Consensus 297 tgs~-DG~I~IW--Dl~s~~~l 315 (845)
+++. ++.|.+| |..+++..
T Consensus 302 v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 302 VVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEETTTTEEEEEEECTTTCCEE
T ss_pred EEEcCCCcEEEEEEeCCCCeEE
Confidence 6665 5899999 55666654
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-15 Score=168.97 Aligned_cols=258 Identities=12% Similarity=0.143 Sum_probs=171.5
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC-CCeeEEEecC-CCCCeEEEEEcCCCCE--EEEEE------------
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALG-KSNCIMSLSG-HSTPVESVQFGNGEET--LSAGC------------ 77 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~-t~~~i~~l~~-h~~~V~sLafSpdg~~--LaSgs------------ 77 (845)
+...+..++|+| +|++|++++.+ .|.+|++. +++....... ..+.+.+++|+|+|++ ++++.
T Consensus 38 ~~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 445788999999 99999999888 99999997 7776543321 1123567899999994 44543
Q ss_pred -CCCcEEEEECC-CCcEEEEEc----CCCCCeEEEEEccCCCEEEEEEC-CCeEEEEECC-CCceE--EEEc--CCCCCe
Q psy467 78 -QSGSIKIWNLA-VPTVQRTLN----GHKSSITSVDFHPYGDYLCSGSL-DSFIKLWDLR-RKGCI--YTYR--GHSKSI 145 (845)
Q Consensus 78 -~DGtV~VWDl~-tg~~v~~l~----~h~~~V~~lafspdg~~Lasgs~-DG~I~IWDl~-t~~~l--~~~~--~h~~~V 145 (845)
.+|.+.+|++. +++....+. .+...+.+++|+|||+++++++. ++.|.+||+. +++.. ..+. .+...+
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 68999999997 466554443 24567999999999998887764 6799999998 67643 3333 235679
Q ss_pred EEEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECC--CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcc
Q psy467 146 NSIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLS--LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTK 222 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~--tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~ 222 (845)
..++|+|||+++++++. ++.+.+ |++. +++. ......
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v-------------~~~~~~~g~~--------------------~~~~~~------- 235 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICE-------------YVIDPATHMP--------------------VYTHHS------- 235 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEE-------------EEECTTTCCE--------------------EEEEEE-------
T ss_pred CEeEECCCCCEEEEEECCCCeEEE-------------EEEeCCCCcE--------------------EEccce-------
Confidence 99999999999888775 678888 7764 3332 110000
Q ss_pred ceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE-EcCCCCcccceEEEEEeC-
Q psy467 223 AKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS-ILPQSPMLCFILTTSSSA- 300 (845)
Q Consensus 223 ~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla-fSPdg~~~~~~lLatgs~- 300 (845)
+ ...|.+....... ......+..++ |+|||+ +|++++.
T Consensus 236 ----~------------------------------~~~~~~~~g~~~~-~~~~~~~~~i~~~spdG~-----~l~v~~~~ 275 (365)
T 1jof_A 236 ----F------------------------------PLIPPGIPDRDPE-TGKGLYRADVCALTFSGK-----YMFASSRA 275 (365)
T ss_dssp ----E------------------------------ESSCTTCCCBCTT-TSSBSEEEEEEEECTTSS-----EEEEEEEE
T ss_pred ----E------------------------------EcCCCCcCCcccc-cccccccccEEEECCCCC-----EEEEECCC
Confidence 0 0000000000000 00001245566 677776 6655543
Q ss_pred CC-----eEEEEECC-CCeEEE---EecCCCCCEEEEEEeC---CCCEEEEEeCC-C-EEEEEecCC
Q psy467 301 DR-----TVNFWDLE-KFSLVS---TTEKNSSTIRRLTFSE---GGECLLGGDTE-G-LKVYGWEPA 353 (845)
Q Consensus 301 DG-----~I~IWDl~-s~~~l~---tl~gh~~~VtslafSp---dG~~Lasgs~D-G-I~IWDl~tg 353 (845)
++ .|.+|++. +++... ....+...+..++|+| ||++|++++.+ + |.+|+++..
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 22 89999986 566543 2333455677899999 89999999875 5 999999876
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-16 Score=187.16 Aligned_cols=290 Identities=10% Similarity=0.015 Sum_probs=194.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEE--eCCCeEEEEECCCCeeEEEecCCCCCeE---------EEEEc--CCCCE-EE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATG--GDDKKVNLWALGKSNCIMSLSGHSTPVE---------SVQFG--NGEET-LS 74 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTg--s~DG~I~IWdl~t~~~i~~l~~h~~~V~---------sLafS--pdg~~-La 74 (845)
+.+.+|...|..++|++ ++-+++.. +.++...||....+.....+..|...+. ...|+ |||+. |+
T Consensus 17 ~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 17 ALVASRSGRPACVGAVG-DEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHHTCSCCEEEEEET-TEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHHhhcCCccceeEEcC-CeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 45778999999999998 66566666 5578999999655566777877777766 66676 99998 77
Q ss_pred EEEC-CCcEEEEECC--C-CcEEEEEcC-----CCCCeEEEEEccCCCEEEEEECC----------CeEEEEECCC----
Q psy467 75 AGCQ-SGSIKIWNLA--V-PTVQRTLNG-----HKSSITSVDFHPYGDYLCSGSLD----------SFIKLWDLRR---- 131 (845)
Q Consensus 75 Sgs~-DGtV~VWDl~--t-g~~v~~l~~-----h~~~V~~lafspdg~~Lasgs~D----------G~I~IWDl~t---- 131 (845)
.++. +..|.+|++. . +. ...+.. |...+.+++|+|||+.|++++.+ ..|++||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 6654 5667777765 2 43 445554 56678899999999999988876 5899999987
Q ss_pred --CceEEEEc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECC-CCccCCCCCCCCCcceeecCCC
Q psy467 132 --KGCIYTYR-GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLS-LVHPLGTPPPQYTSSVPFSHNT 207 (845)
Q Consensus 132 --~~~l~~~~-~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~-tg~~l~~~~~~~i~svs~spdg 207 (845)
+.. ..+. .+...+..++|||||++|+.++.++... ......|++||+. ++...
T Consensus 175 ~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~-----~~~~~~i~~~d~~~~g~~~----------------- 231 (662)
T 3azo_A 175 DRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM-----PWEGTELKTARVTEDGRFA----------------- 231 (662)
T ss_dssp CGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCC-----TTTCEEEEEEEECTTSCEE-----------------
T ss_pred cCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCC-----CCCCcEEEEEEECCCCccc-----------------
Confidence 444 4555 5566788899999999999887553100 0011123338887 45210
Q ss_pred CeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCC
Q psy467 208 SLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQS 287 (845)
Q Consensus 208 ~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg 287 (845)
.......++... + ..+.|+|+ |
T Consensus 232 ~~~~l~~~~~~~-------~---------------------------~~~~~spd------------------------g 253 (662)
T 3azo_A 232 DTRTLLGGPEEA-------I---------------------------AQAEWAPD------------------------G 253 (662)
T ss_dssp EEEEEEEETTBC-------E---------------------------EEEEECTT------------------------S
T ss_pred ccEEeCCCCCce-------E---------------------------cceEECCC------------------------C
Confidence 001111111111 2 34444544 4
Q ss_pred CcccceEEEEEeCCC--eEEEEECCCCeEEEEecCCCCC--------EEEEEEeCCCCEEEEEeCCC-EEEEEecC-Cce
Q psy467 288 PMLCFILTTSSSADR--TVNFWDLEKFSLVSTTEKNSST--------IRRLTFSEGGECLLGGDTEG-LKVYGWEP-ARQ 355 (845)
Q Consensus 288 ~~~~~~lLatgs~DG--~I~IWDl~s~~~l~tl~gh~~~--------VtslafSpdG~~Lasgs~DG-I~IWDl~t-gk~ 355 (845)
+ +++++..++ .|++||+.+++.......+... +.+++|+++++++++++. + ++||.++. +..
T Consensus 254 ~-----l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 254 S-----LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp C-----EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred e-----EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 4 788888888 6777787777765444433222 567899999999999998 8 88885542 234
Q ss_pred EEEecCCCCCeEEE-EEcCCceEEEE------EEEEeeC
Q psy467 356 YDAQPMGWGKVQDL-AVTGTQLWFRR------VGTWSHQ 387 (845)
Q Consensus 356 l~tl~~h~~~VtsV-afSdg~lLaaS------VsiW~~d 387 (845)
+..+..|...+..+ +++++.+++++ ..+|..+
T Consensus 328 ~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 328 LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 67788888888877 66555555444 5677655
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.72 E-value=8.5e-17 Score=183.29 Aligned_cols=210 Identities=12% Similarity=0.061 Sum_probs=155.5
Q ss_pred CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC----------cEE------EEEcCCCC
Q psy467 38 KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP----------TVQ------RTLNGHKS 101 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg----------~~v------~~l~~h~~ 101 (845)
+.+++|+.... .+...++.+++++++.++++++.++ +++|+.... ..+ ..+ .+..
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKF 93 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSS
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCC
Confidence 46888865311 1345689999999999999998887 888875311 111 122 2566
Q ss_pred CeEEEEEccCCCEEE----EEECCCeEEEEECCCC--------ce---EEEEcCCCCCeEEEEEecC-CCEEEEEeCCCc
Q psy467 102 SITSVDFHPYGDYLC----SGSLDSFIKLWDLRRK--------GC---IYTYRGHSKSINSIRFSPD-GQWIASGGEDGV 165 (845)
Q Consensus 102 ~V~~lafspdg~~La----sgs~DG~I~IWDl~t~--------~~---l~~~~~h~~~V~sLafSPd-g~~Lasgs~DG~ 165 (845)
.|.+++|+|++++|+ +|+.|+.|++||+.++ +. +..+.+|...|.+++|+|+ +++|++++.||.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 799999999999999 7888999999998654 22 4555678999999999997 889999999999
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
|++ ||++++.. +....+|... +
T Consensus 174 v~i-------------wD~~~~~~--------------------~~~~~~~~~~-------v------------------ 195 (434)
T 2oit_A 174 IAV-------------LQVTETVK--------------------VCATLPSTVA-------V------------------ 195 (434)
T ss_dssp EEE-------------EEESSSEE--------------------EEEEECGGGC-------E------------------
T ss_pred EEE-------------EEcCCCcc--------------------eeeccCCCCc-------e------------------
Confidence 999 99987654 3333333333 3
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC---
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS--- 322 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~--- 322 (845)
.+++|+|++. +|++|+.||.|++||++ ++....+..|.
T Consensus 196 ---------~~v~wspdg~-----------------------------~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~ 236 (434)
T 2oit_A 196 ---------TSVCWSPKGK-----------------------------QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYE 236 (434)
T ss_dssp ---------EEEEECTTSS-----------------------------CEEEEETTSCEEEECTT-CCEEEEECCCTTCC
T ss_pred ---------eEEEEcCCCC-----------------------------EEEEEcCCCcEEEEccC-CcccccccCCcccC
Confidence 4455555554 89999999999999998 66666665442
Q ss_pred ----CCEEEEEEeCCCCEEEEEe-CC------C-EEEEEecCC
Q psy467 323 ----STIRRLTFSEGGECLLGGD-TE------G-LKVYGWEPA 353 (845)
Q Consensus 323 ----~~VtslafSpdG~~Lasgs-~D------G-I~IWDl~tg 353 (845)
..|.+++|++++.++++.+ .+ . +++|++...
T Consensus 237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 3799999999998886543 22 1 889999764
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-15 Score=165.89 Aligned_cols=270 Identities=8% Similarity=0.055 Sum_probs=175.9
Q ss_pred EEEEEeCC--CeEEEEEC--CCCeeEE--Eec-CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC-CCcEEEEEcC-CC
Q psy467 30 VLATGGDD--KKVNLWAL--GKSNCIM--SLS-GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA-VPTVQRTLNG-HK 100 (845)
Q Consensus 30 ~LaTgs~D--G~I~IWdl--~t~~~i~--~l~-~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~-tg~~v~~l~~-h~ 100 (845)
.+++|+.. +.|.+|++ .+++... ... .....+..++|+|++++|++++.+ .|.+|++. +++....... ..
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 35566543 56877765 4555432 221 234568899999999999998887 99999997 7776543321 11
Q ss_pred CCeEEEEEccCCCE--EEEEE-------------CCCeEEEEECC-CCceEEEEc----CCCCCeEEEEEecCCCEEEEE
Q psy467 101 SSITSVDFHPYGDY--LCSGS-------------LDSFIKLWDLR-RKGCIYTYR----GHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 101 ~~V~~lafspdg~~--Lasgs-------------~DG~I~IWDl~-t~~~l~~~~----~h~~~V~sLafSPdg~~Lasg 160 (845)
+...+++|+|+|++ +++++ .+|.+.+|++. +++....+. .+...+.+++|+|||++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 23567899999984 44543 68999999997 465544333 245679999999999988877
Q ss_pred eC-CCcEEEeeeeccCCceeEEEECC-CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 161 GE-DGVVRIGASFHLTNTSIHVVDLS-LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 161 s~-DG~I~I~~~~~~~~~~I~vWDl~-tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+. ++.|.+ ||+. +++.. .+..+...
T Consensus 163 ~~~~~~v~~-------------~~~~~~g~~~------------------~~~~~~~~---------------------- 189 (365)
T 1jof_A 163 DLTANKLWT-------------HRKLASGEVE------------------LVGSVDAP---------------------- 189 (365)
T ss_dssp ETTTTEEEE-------------EEECTTSCEE------------------EEEEEECS----------------------
T ss_pred cCCCCEEEE-------------EEECCCCCEE------------------EeeeEecC----------------------
Confidence 64 578888 9987 45430 01111100
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECC--CCeEE
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLE--KFSLV 315 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~--s~~~l 315 (845)
..+ ..+..++|+|||+ ++++++ .++.|.+|++. +++..
T Consensus 190 ----------------------~~g------------~~p~~~~~spdg~-----~l~v~~~~~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 190 ----------------------DPG------------DHPRWVAMHPTGN-----YLYALMEAGNRICEYVIDPATHMPV 230 (365)
T ss_dssp ----------------------STT------------CCEEEEEECTTSS-----EEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ----------------------CCC------------CCCCEeEECCCCC-----EEEEEECCCCeEEEEEEeCCCCcEE
Confidence 000 1234455555555 666665 47899999765 56542
Q ss_pred ---EEec---C----CCC------CEEEEE-EeCCCCEEEEEeC--C-----CEEEEEec-CCceEE---EecCCCCCeE
Q psy467 316 ---STTE---K----NSS------TIRRLT-FSEGGECLLGGDT--E-----GLKVYGWE-PARQYD---AQPMGWGKVQ 367 (845)
Q Consensus 316 ---~tl~---g----h~~------~Vtsla-fSpdG~~Lasgs~--D-----GI~IWDl~-tgk~l~---tl~~h~~~Vt 367 (845)
..+. . |.. .+..++ |+|||++|++++. + .|.+|+++ +++... ....+...+.
T Consensus 231 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~ 310 (365)
T 1jof_A 231 YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGH 310 (365)
T ss_dssp EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTT
T ss_pred EccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcc
Confidence 2222 1 122 588999 9999999887653 3 39999996 566543 2334555677
Q ss_pred EEEEcC----CceEEEE------EEEEeeCCCCCc
Q psy467 368 DLAVTG----TQLWFRR------VGTWSHQDSGFS 392 (845)
Q Consensus 368 sVafSd----g~lLaaS------VsiW~~d~~~~~ 392 (845)
.++|++ |++|+++ |.+|..+...+.
T Consensus 311 ~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l~ 345 (365)
T 1jof_A 311 SNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLH 345 (365)
T ss_dssp CCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEE
T ss_pred cceecCCCcCCCEEEEEEcCCCeEEEEEEchhhCc
Confidence 888883 8888887 899988766443
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-16 Score=173.67 Aligned_cols=285 Identities=11% Similarity=0.025 Sum_probs=180.9
Q ss_pred eEEeccCCCc-----EEEEEEecCCCCEEEEEeCC---CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC
Q psy467 8 AEDFMAHGAS-----VNCLALGKKSGQVLATGGDD---KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS 79 (845)
Q Consensus 8 l~~L~gH~~~-----V~~LafSp~dg~~LaTgs~D---G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D 79 (845)
++.+..+... +.+++|+| +|++|+..... ..|.+|++.+++......++......+.|+|||++|+.++.+
T Consensus 23 ~~~l~~~~~~~~~~~~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~ 101 (396)
T 3c5m_A 23 VTRLTPTDIICHRNYFYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE 101 (396)
T ss_dssp EEECSCTTSCEECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT
T ss_pred eEEEecCCCCccceeeecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC
Confidence 4556655444 78899999 89988877543 478889998887654434333333347899999999999999
Q ss_pred CcEEEEECCCCcEEEEEcCCCCCeEE-------------------EEEccCCCEEEEE-----ECCCeEEEEECCCCceE
Q psy467 80 GSIKIWNLAVPTVQRTLNGHKSSITS-------------------VDFHPYGDYLCSG-----SLDSFIKLWDLRRKGCI 135 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~~h~~~V~~-------------------lafspdg~~Lasg-----s~DG~I~IWDl~t~~~l 135 (845)
+.|.+||+.+++.......+...... +.|+|+++.++.+ ..+..|.+||+.+++..
T Consensus 102 ~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (396)
T 3c5m_A 102 LNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE 181 (396)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE
T ss_pred CcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE
Confidence 99999999988766655544432222 3456777766543 35668999999887765
Q ss_pred EEEcCCCCCeEEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe
Q psy467 136 YTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 136 ~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~ 214 (845)
... .+...+..+.|+| +++.|+.++.++. ......+++||+..+.. . .+.
T Consensus 182 ~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~-------~~~~~~l~~~d~~~~~~--------------------~-~l~ 232 (396)
T 3c5m_A 182 VIH-QDTAWLGHPIYRPFDDSTVGFCHEGPH-------DLVDARMWLVNEDGSNV--------------------R-KIK 232 (396)
T ss_dssp EEE-EESSCEEEEEEETTEEEEEEEEECSCS-------SSCSCCCEEEETTSCCC--------------------E-ESS
T ss_pred eec-cCCcccccceECCCCCCEEEEEecCCC-------CCCCceEEEEECCCCce--------------------e-Eee
Confidence 544 4567789999999 7887777654321 00001223377754432 1 110
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
.+... ..+..++|+|||+ .
T Consensus 233 ~~~~~--------------------------------------------------------~~~~~~~~spdg~-----~ 251 (396)
T 3c5m_A 233 EHAEG--------------------------------------------------------ESCTHEFWIPDGS-----A 251 (396)
T ss_dssp CCCTT--------------------------------------------------------EEEEEEEECTTSS-----C
T ss_pred ccCCC--------------------------------------------------------ccccceEECCCCC-----E
Confidence 00000 0122344444444 5
Q ss_pred EEEEeCC-----CeEEEEECCCCeEEEEecCCCCCEEEEEEeC-CCCEEEEEe----------------CCC-EEEEEec
Q psy467 295 TTSSSAD-----RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE-GGECLLGGD----------------TEG-LKVYGWE 351 (845)
Q Consensus 295 Latgs~D-----G~I~IWDl~s~~~l~tl~gh~~~VtslafSp-dG~~Lasgs----------------~DG-I~IWDl~ 351 (845)
|+.++.+ +.|++||+.+++....... . ... +.|+| ||+++++++ .+. |.+||+.
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 252 MAYVSYFKGQTDRVIYKANPETLENEEVMVM-P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EEEEEEETTTCCEEEEEECTTTCCEEEEEEC-C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred EEEEecCCCCccceEEEEECCCCCeEEeeeC-C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 5555433 4599999998865443322 1 233 89999 999888764 234 9999998
Q ss_pred CCceEEEecCCCC-----------CeEEEEEc-CCceEEEE------EEEEeeC
Q psy467 352 PARQYDAQPMGWG-----------KVQDLAVT-GTQLWFRR------VGTWSHQ 387 (845)
Q Consensus 352 tgk~l~tl~~h~~-----------~VtsVafS-dg~lLaaS------VsiW~~d 387 (845)
+++.. .+..+.. .+..++|+ ||+.|+.. ..+|.++
T Consensus 329 ~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 329 AKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 87643 3444443 26678999 88877655 4566544
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-15 Score=163.52 Aligned_cols=271 Identities=14% Similarity=0.038 Sum_probs=172.3
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCC-CCeEEEEEccCCCEEEE-EECCCeEEEEECCCCceEEEEcC
Q psy467 63 SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK-SSITSVDFHPYGDYLCS-GSLDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 63 sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~-~~V~~lafspdg~~Las-gs~DG~I~IWDl~t~~~l~~~~~ 140 (845)
.+++++++.++++++.++.|.+||+.+++.+..+..+. ..+..++|+|+++++++ +..++.|.+||+.+++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678888999999999999999999999888887443 25789999999987654 45689999999999988877763
Q ss_pred CC------CCeEEEEEecCCCEEEEEeCC------------CcEEEeeeeccCCceeEEEECCCCccCCCC----CCCCC
Q psy467 141 HS------KSINSIRFSPDGQWIASGGED------------GVVRIGASFHLTNTSIHVVDLSLVHPLGTP----PPQYT 198 (845)
Q Consensus 141 h~------~~V~sLafSPdg~~Lasgs~D------------G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~----~~~~i 198 (845)
.. ..+.+++|+|||+++++++.+ +.|.+ ||+.+++..... .+..+
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~-------------~d~~~~~~~~~~~~~~~~~~~ 150 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV-------------FSTADGLEAKPVRTFPMPRQV 150 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE-------------EEGGGGGGBCCSEEEECCSSC
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEE-------------EECCCccccceeeeccCCCcc
Confidence 32 237889999999999998865 67777 999875543322 13456
Q ss_pred cceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCc
Q psy467 199 SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSR 278 (845)
Q Consensus 199 ~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I 278 (845)
..++|+|+|+ +... +. . +.++++.... ....+ +.+.+... .....
T Consensus 151 ~~~~~s~dg~-l~~~-~~--~-----i~~~d~~~~~--------------------~~~~~-~~~~~~~~-----~~~~~ 195 (349)
T 1jmx_B 151 YLMRAADDGS-LYVA-GP--D-----IYKMDVKTGK--------------------YTVAL-PLRNWNRK-----GYSAP 195 (349)
T ss_dssp CCEEECTTSC-EEEE-SS--S-----EEEECTTTCC--------------------EEEEE-CSTTCCCT-----TBCCC
T ss_pred cceeECCCCc-EEEc-cC--c-----EEEEeCCCCc--------------------eeccc-cccccCCc-----cccCc
Confidence 7788999998 4332 11 1 2222111100 00011 11100000 00000
Q ss_pred eeE-EEcCCCCcccceEEE-----EEeCC-----------CeEEEEECCCCeE-EEEecCCCCCEEEEEEeC-CCCEEEE
Q psy467 279 TSL-SILPQSPMLCFILTT-----SSSAD-----------RTVNFWDLEKFSL-VSTTEKNSSTIRRLTFSE-GGECLLG 339 (845)
Q Consensus 279 ~sl-afSPdg~~~~~~lLa-----tgs~D-----------G~I~IWDl~s~~~-l~tl~gh~~~VtslafSp-dG~~Las 339 (845)
..+ .|...+... .+. .-+.| ..+..+|..+++. ...+..+...+.+++|+| +|++|++
T Consensus 196 ~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~ 272 (349)
T 1jmx_B 196 DVLYFWPHQSPRH---EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG 272 (349)
T ss_dssp BCCCCCCCCCTTC---EEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEE
T ss_pred cceeeecCCCcce---eEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEE
Confidence 111 222222110 111 11111 1222356665543 222334556789999999 9999998
Q ss_pred EeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 340 GDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 340 gs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
+ ++ |.+||+.+++.+..+..+ ..+.+++|+ +|++|+++ +.+|..+
T Consensus 273 ~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 273 V--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp E--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred E--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEecc
Confidence 8 66 999999999888777643 457899999 88877776 7888654
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.71 E-value=7.4e-16 Score=180.76 Aligned_cols=254 Identities=12% Similarity=0.035 Sum_probs=173.3
Q ss_pred ceeeee-----EEeccCC-CcEEEEEEecCCCCEEEEEeC---CCeEEEEECCC---CeeEEEecCCCCCeEEEEEcCCC
Q psy467 3 AKVEKA-----EDFMAHG-ASVNCLALGKKSGQVLATGGD---DKKVNLWALGK---SNCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 3 irlw~l-----~~L~gH~-~~V~~LafSp~dg~~LaTgs~---DG~I~IWdl~t---~~~i~~l~~h~~~V~sLafSpdg 70 (845)
+++|.+ +.+..|. ..|.+++|+| + +++++++. +....||.+.. +... .+..+ ..+...+|+|++
T Consensus 46 ~~lw~~~~g~~~~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg 121 (582)
T 3o4h_A 46 VNAYLYDGGETVKLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTG 121 (582)
T ss_dssp EEEEEEETTEEEECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECS
T ss_pred eeEEEEcCCCcEeeecccccccccccCCC-C-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCC
Confidence 456764 4566676 6899999999 6 77777765 45556655432 3333 44422 245577888888
Q ss_pred CE-EEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC----CeEEEEECCCCceEEEEcCCCCCe
Q psy467 71 ET-LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD----SFIKLWDLRRKGCIYTYRGHSKSI 145 (845)
Q Consensus 71 ~~-LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D----G~I~IWDl~t~~~l~~~~~h~~~V 145 (845)
+. +++.+.++.+.+||+.+++.......+ . .+++|+|||++|++++.+ +.|++||+.+++.. .+..+...+
T Consensus 122 ~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~ 197 (582)
T 3o4h_A 122 EAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSF 197 (582)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEE
T ss_pred CeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCcc
Confidence 63 333344555669999988766555433 2 789999999999988777 78999999887754 667788889
Q ss_pred EEEEEecCCCEEEEEeCCC--cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccc
Q psy467 146 NSIRFSPDGQWIASGGEDG--VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKA 223 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG--~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~ 223 (845)
..++|+|||++|+++..++ .|++ ||+.+++. . .+.++...
T Consensus 198 ~~~~~SpDG~~l~~~~~~~~~~i~~-------------~d~~~~~~--------------------~-~~~~~~~~---- 239 (582)
T 3o4h_A 198 SSASISPGMKVTAGLETAREARLVT-------------VDPRDGSV--------------------E-DLELPSKD---- 239 (582)
T ss_dssp EEEEECTTSCEEEEEECSSCEEEEE-------------ECTTTCCE--------------------E-ECCCSCSH----
T ss_pred ccceECCCCCEEEEccCCCeeEEEE-------------EcCCCCcE--------------------E-EccCCCcC----
Confidence 9999999999999888888 6777 99987776 3 22222221
Q ss_pred eeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCe
Q psy467 224 KIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT 303 (845)
Q Consensus 224 ~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~ 303 (845)
+ ..+. + ......+|+|||. ++++++.|+.
T Consensus 240 ---~---------------------------~~~~----~------------~~~~~~~~spdg~-----~~~~~~~~g~ 268 (582)
T 3o4h_A 240 ---F---------------------------SSYR----P------------TAITWLGYLPDGR-----LAVVARREGR 268 (582)
T ss_dssp ---H---------------------------HHHC----C------------SEEEEEEECTTSC-----EEEEEEETTE
T ss_pred ---h---------------------------hhhh----h------------ccccceeEcCCCc-----EEEEEEcCCc
Confidence 1 0111 0 0011233555554 8999999999
Q ss_pred EEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC--EEEEEecCCceEEEe
Q psy467 304 VNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--LKVYGWEPARQYDAQ 359 (845)
Q Consensus 304 I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk~l~tl 359 (845)
+++|++ ++.+. .+.+.|.+++|+ +|+++++++.+. -.+|.++....+..+
T Consensus 269 ~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~~~~~l 320 (582)
T 3o4h_A 269 SAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGEPLLEG 320 (582)
T ss_dssp EEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEECC
T ss_pred EEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCCceEEE
Confidence 999999 66554 334679999999 999999888776 455555433233333
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-14 Score=157.38 Aligned_cols=263 Identities=9% Similarity=0.066 Sum_probs=175.1
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEe---------CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEE
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGG---------DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS 74 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs---------~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~La 74 (845)
+...+..+.. -..+..+++ +|+.++... .++.|.+|++.+++... + ..+..++|+|||++|+
T Consensus 4 ~~~~~~~l~~-~~~~~~~~~---dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la 74 (347)
T 2gop_A 4 IEWNEKTFAK-FAYLSDPRT---KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIA 74 (347)
T ss_dssp ------CCCC-SCEEEEEEE---ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEE
T ss_pred ccCCccccee-eEEcccceE---CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEE
Confidence 3344444443 345778888 577776542 25679999998876543 3 4688999999999999
Q ss_pred EEECC---C--cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC---------------------------C
Q psy467 75 AGCQS---G--SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD---------------------------S 122 (845)
Q Consensus 75 Sgs~D---G--tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D---------------------------G 122 (845)
.++.+ + .|.+|++.+++.......+ . +..++|+|||+.|+.++.+ .
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 152 (347)
T 2gop_A 75 FMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKT 152 (347)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEE
T ss_pred EEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccc
Confidence 87754 3 4888899888766555433 3 9999999999998887642 5
Q ss_pred eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC-------cEEEeeeeccCCceeEEEECCCCccCCCCCC
Q psy467 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG-------VVRIGASFHLTNTSIHVVDLSLVHPLGTPPP 195 (845)
Q Consensus 123 ~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG-------~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~ 195 (845)
.|.+||+.+++.+..+.. . .+..++|+||| +++++..++ ...+ +.+| +++.
T Consensus 153 ~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l-----------~~~d--~~~~------ 210 (347)
T 2gop_A 153 TFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDI-----------YIWE--DGKE------ 210 (347)
T ss_dssp EEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEE-----------EEEE--TTEE------
T ss_pred eEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccE-----------EEeC--CCce------
Confidence 799999988876455554 3 78899999999 777775542 2233 2244 2222
Q ss_pred CCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccc
Q psy467 196 QYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVS 275 (845)
Q Consensus 196 ~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~ 275 (845)
..+..+ .. + . .++|+|+
T Consensus 211 ---------------~~l~~~-~~-------~---------------------------~--~~spdg~----------- 227 (347)
T 2gop_A 211 ---------------EKMFEK-VS-------F---------------------------Y--AVDSDGE----------- 227 (347)
T ss_dssp ---------------EEEEEE-ES-------E---------------------------E--EEEECSS-----------
T ss_pred ---------------EEeccC-cc-------e---------------------------e--eECCCCC-----------
Confidence 111111 11 1 1 1255555
Q ss_pred cCceeEEEcCCCCcccceEEEEEeCC--------CeEEEEECCCCeEEEEecCCCCCEEE-EEEeCCCCEEEEEeCCC-E
Q psy467 276 VSRTSLSILPQSPMLCFILTTSSSAD--------RTVNFWDLEKFSLVSTTEKNSSTIRR-LTFSEGGECLLGGDTEG-L 345 (845)
Q Consensus 276 ~~I~slafSPdg~~~~~~lLatgs~D--------G~I~IWDl~s~~~l~tl~gh~~~Vts-lafSpdG~~Lasgs~DG-I 345 (845)
.|+.++.+ ..|.+|| +++......+|...+.. +.|+ || ++++++.++ +
T Consensus 228 ------------------~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~ 285 (347)
T 2gop_A 228 ------------------RILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSV 285 (347)
T ss_dssp ------------------CEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEE
T ss_pred ------------------EEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcE
Confidence 56555533 4788888 56655555566778886 9999 88 888999999 9
Q ss_pred EEEEecCCceEEEecCCCCCeEEEEEcCCceEEEE------EEEEeeC
Q psy467 346 KVYGWEPARQYDAQPMGWGKVQDLAVTGTQLWFRR------VGTWSHQ 387 (845)
Q Consensus 346 ~IWDl~tgk~l~tl~~h~~~VtsVafSdg~lLaaS------VsiW~~d 387 (845)
+|| +.+++.. .+..+.+.|.+++|++ ++++++ ..+|..+
T Consensus 286 ~l~-~~~g~~~-~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 286 NLY-IWDGEIK-PIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEE-EESSSEE-EEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred EEE-EcCCceE-EEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 999 8866654 4444577899999999 666555 3678766
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-14 Score=157.71 Aligned_cols=249 Identities=11% Similarity=0.099 Sum_probs=182.8
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCC------------------------CeEEEEECCCCeeEEEec-CCCCCeEEEEEcC
Q psy467 14 HGASVNCLALGKKSGQVLATGGDD------------------------KKVNLWALGKSNCIMSLS-GHSTPVESVQFGN 68 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~D------------------------G~I~IWdl~t~~~i~~l~-~h~~~V~sLafSp 68 (845)
--+.|.++++++ +|+++++...+ +.|.+||..+++.+..+. ++......+++++
T Consensus 22 ~l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 22 LPGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CCSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred ecCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 346799999999 89999888777 479999998888877664 4556899999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCc-EEEEE---------cCCCCCeEEEEEcc-CCCEEEEEE-CCCeEEEEECCCCceEE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPT-VQRTL---------NGHKSSITSVDFHP-YGDYLCSGS-LDSFIKLWDLRRKGCIY 136 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~-~v~~l---------~~h~~~V~~lafsp-dg~~Lasgs-~DG~I~IWDl~t~~~l~ 136 (845)
+|+++++...++.|++||..... .+..+ ..+......++++| ++..+++.+ .++.|++|| .++..+.
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT 179 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence 99988888888999999986542 45555 23444688999999 787777776 689999999 5677777
Q ss_pred EEcCCC----------CCeEEEEEecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecC
Q psy467 137 TYRGHS----------KSINSIRFSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSH 205 (845)
Q Consensus 137 ~~~~h~----------~~V~sLafSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~sp 205 (845)
.+.... ....+++++|+ ++++++...++.|++ ||..+++.
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~-------------~~~~~G~~---------------- 230 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQC-------------FKTDTKEF---------------- 230 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEE-------------EETTTCCE----------------
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEE-------------EECCCCcE----------------
Confidence 764222 23889999998 666777777888999 99887766
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
+..+....... .+ ..++++| +. .+..
T Consensus 231 ----~~~~~~~~~~~-----~~---------------------------~~~~~~p-g~-----------------~~~~ 256 (329)
T 3fvz_A 231 ----VREIKHASFGR-----NV---------------------------FAISYIP-GF-----------------LFAV 256 (329)
T ss_dssp ----EEEECCTTTTT-----CE---------------------------EEEEEET-TE-----------------EEEE
T ss_pred ----EEEEeccccCC-----Cc---------------------------ceeeecC-CE-----------------EEEe
Confidence 44432211110 01 4455555 22 1112
Q ss_pred CCCcccceEEEEEeCCCeEEEEECCCCeEEEEec---CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 286 QSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE---KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 286 dg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~---gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
+|+ .+++...+..|++||..+++.+..+. ++...+..++++|+|.++++...++ |++|+++.
T Consensus 257 ~g~-----~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 257 NGK-----PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ECC-----CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCC-----EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 332 33444456689999999999998884 5667899999999997777777777 99999864
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=5.3e-14 Score=148.92 Aligned_cols=240 Identities=9% Similarity=0.146 Sum_probs=173.6
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec------CCCCCeEEEEEc-CCCCEEEEEEC-CCcEEE
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS------GHSTPVESVQFG-NGEETLSAGCQ-SGSIKI 84 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~------~h~~~V~sLafS-pdg~~LaSgs~-DGtV~V 84 (845)
+|-..+.++++++ +++++++...++.|.+||.. ++.+..+. ++...+.+++++ +++..+++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4456899999999 88988888889999999986 66666653 244678999994 67766666543 889999
Q ss_pred EECCCCcEEEEEcC-CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEEEEEecCCCEEEEEe
Q psy467 85 WNLAVPTVQRTLNG-HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 85 WDl~tg~~v~~l~~-h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~sLafSPdg~~Lasgs 161 (845)
|| .+++.+..+.. +...+.+++++++|+.+++...++.|.+||.. ++.+..+. .+...+.+++++++|+++++..
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 99 56777777743 34568999999999977777778999999964 56666654 3445689999999999777777
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
.++.|.+ ||.. ++. +..+.....
T Consensus 183 ~~~~i~~-------------~~~~-g~~--------------------~~~~~~~g~----------------------- 205 (286)
T 1q7f_A 183 RAHCVKV-------------FNYE-GQY--------------------LRQIGGEGI----------------------- 205 (286)
T ss_dssp GGTEEEE-------------EETT-CCE--------------------EEEESCTTT-----------------------
T ss_pred CCCEEEE-------------EcCC-CCE--------------------EEEEccCCc-----------------------
Confidence 7889999 9863 322 222211100
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC-eEEEEECCCCeEEEEecC
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR-TVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG-~I~IWDl~s~~~l~tl~g 320 (845)
...+..++++++|+ ++++...++ .|.+||. +++.+..+..
T Consensus 206 ---------------------------------~~~p~~i~~d~~G~-----l~v~~~~~~~~i~~~~~-~g~~~~~~~~ 246 (286)
T 1q7f_A 206 ---------------------------------TNYPIGVGINSNGE-----ILIADNHNNFNLTIFTQ-DGQLISALES 246 (286)
T ss_dssp ---------------------------------SCSEEEEEECTTCC-----EEEEECSSSCEEEEECT-TSCEEEEEEE
T ss_pred ---------------------------------cCCCcEEEECCCCC-----EEEEeCCCCEEEEEECC-CCCEEEEEcc
Confidence 01123444555554 788887776 9999995 4666666665
Q ss_pred CC--CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 321 NS--STIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 321 h~--~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+. ..+.+++++|+|+++++ +.++ |++|++...
T Consensus 247 ~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 247 KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 43 34789999999987766 5677 999998654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.67 E-value=4.4e-15 Score=176.45 Aligned_cols=265 Identities=13% Similarity=0.060 Sum_probs=174.3
Q ss_pred eEEeccCCCcEE---------EEEEe--cCCCCE-EEEEeC-CCeEEEEECC--CCeeEEEecC-----CCCCeEEEEEc
Q psy467 8 AEDFMAHGASVN---------CLALG--KKSGQV-LATGGD-DKKVNLWALG--KSNCIMSLSG-----HSTPVESVQFG 67 (845)
Q Consensus 8 l~~L~gH~~~V~---------~LafS--p~dg~~-LaTgs~-DG~I~IWdl~--t~~~i~~l~~-----h~~~V~sLafS 67 (845)
.+++..|...|. +..|+ | +|+. |+.++. +..|.+|++. +......+.. |...+.+++|+
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SP-Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRP-AGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCS-SSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEE
T ss_pred cceeCCCCccccccccccCCccceeeeec-CCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEEC
Confidence 357778877777 67776 8 7777 766554 5667777765 2034555665 66788999999
Q ss_pred CCCCEEEEEECC----------CcEEEEECCC------CcEEEEEc-CCCCCeEEEEEccCCCEEEEEECC--------C
Q psy467 68 NGEETLSAGCQS----------GSIKIWNLAV------PTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLD--------S 122 (845)
Q Consensus 68 pdg~~LaSgs~D----------GtV~VWDl~t------g~~v~~l~-~h~~~V~~lafspdg~~Lasgs~D--------G 122 (845)
|||+.|++++.+ ..|.+||+.+ ++. ..+. .+...+..++|+|||++|+.++.+ .
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~ 217 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGT 217 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCE
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCc
Confidence 999999998876 5899999988 554 4454 556678889999999999987755 3
Q ss_pred eEEEEECC-CC---ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCC
Q psy467 123 FIKLWDLR-RK---GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYT 198 (845)
Q Consensus 123 ~I~IWDl~-t~---~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i 198 (845)
.|++||+. ++ ........+...+..++|+|||++++++..++...+ +.||+.+++.
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l-----------~~~~~~~~~~--------- 277 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNL-----------HRVDPATGAA--------- 277 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEE-----------EEECTTTCCE---------
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEE-----------EEEECCCCce---------
Confidence 79999998 56 444444445678999999999998888878884444 1166655443
Q ss_pred cceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCc
Q psy467 199 SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSR 278 (845)
Q Consensus 199 ~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I 278 (845)
. .+..+... + ....|+++ +
T Consensus 278 -----------~-~l~~~~~~-------~---------------------------~~p~w~~~---------------~ 296 (662)
T 3azo_A 278 -----------T-QLCRREEE-------F---------------------------AGPLWTPG---------------M 296 (662)
T ss_dssp -----------E-ESSCCSSB-------S---------------------------SCCCCSTT---------------C
T ss_pred -----------e-eccccccc-------c---------------------------cCcccccc---------------C
Confidence 1 11111110 0 11112222 2
Q ss_pred eeEEEcCCCCcccceEEEEEeCCCeEEEE--ECCCCeEEEEecCCCCCEEEE-EEeCCCCEEEEEeCCC-EEEE--EecC
Q psy467 279 TSLSILPQSPMLCFILTTSSSADRTVNFW--DLEKFSLVSTTEKNSSTIRRL-TFSEGGECLLGGDTEG-LKVY--GWEP 352 (845)
Q Consensus 279 ~slafSPdg~~~~~~lLatgs~DG~I~IW--Dl~s~~~l~tl~gh~~~Vtsl-afSpdG~~Lasgs~DG-I~IW--Dl~t 352 (845)
..++|+|+++ ++++++. +.++|| |+.+++ +..+..|...+..+ +++.+.-++++++.+. ..|| |+.+
T Consensus 297 ~~~~~~~~~~-----~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~ 369 (662)
T 3azo_A 297 RWFAPLANGL-----IAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVT 369 (662)
T ss_dssp CSEEECTTSC-----EEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTT
T ss_pred ceEeEeCCCE-----EEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 3466666666 8888888 998998 666665 67777777778777 5544333444555555 4555 5556
Q ss_pred CceEEEecCC
Q psy467 353 ARQYDAQPMG 362 (845)
Q Consensus 353 gk~l~tl~~h 362 (845)
++.......+
T Consensus 370 g~~~~l~~~~ 379 (662)
T 3azo_A 370 GRARTIGARH 379 (662)
T ss_dssp CCEEEEESCC
T ss_pred CceEEeecCC
Confidence 6654333333
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.65 E-value=3.4e-14 Score=153.63 Aligned_cols=263 Identities=10% Similarity=0.063 Sum_probs=182.9
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~ 94 (845)
...|.+++|++ ++..++..+.++.++.| .++....+..+...+.+++|++++++++++..++.|.+||..+++...
T Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 5 QQDLPTLFYSG-KSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp -CCCCBCCSCG-GGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred ccccceeeecC-CccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence 34578899998 66667766778899999 456677777788889999999999988888889999999999887665
Q ss_pred EEcCCCCCeEEEEEccCCCEEEEEECC----CeEEEEECCCCceEEEEc--CCCCCeEEEEEecCCCEEEEEeCC-----
Q psy467 95 TLNGHKSSITSVDFHPYGDYLCSGSLD----SFIKLWDLRRKGCIYTYR--GHSKSINSIRFSPDGQWIASGGED----- 163 (845)
Q Consensus 95 ~l~~h~~~V~~lafspdg~~Lasgs~D----G~I~IWDl~t~~~l~~~~--~h~~~V~sLafSPdg~~Lasgs~D----- 163 (845)
....+...+.+++|+++|+++++...+ +.|.+||..++.....+. .....+.+++++|+|+++++...+
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 554466789999999999887777666 689999998776553333 234578999999999877765431
Q ss_pred -CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 164 -GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 164 -G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
+.|.. ||..+++. ..+....
T Consensus 161 ~~~l~~-------------~~~~~~~~---------------------~~~~~~~------------------------- 181 (333)
T 2dg1_A 161 LGGVYY-------------VSPDFRTV---------------------TPIIQNI------------------------- 181 (333)
T ss_dssp CEEEEE-------------ECTTSCCE---------------------EEEEEEE-------------------------
T ss_pred CceEEE-------------EeCCCCEE---------------------EEeecCC-------------------------
Confidence 33333 55443322 1110000
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE-EEEeCCCeEEEEECCC-CeEEE----
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT-TSSSADRTVNFWDLEK-FSLVS---- 316 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL-atgs~DG~I~IWDl~s-~~~l~---- 316 (845)
..+..++|+|+|+ .+ ++.+.++.|.+||+.+ +..+.
T Consensus 182 ---------------------------------~~~~~i~~~~dg~-----~l~v~~~~~~~i~~~d~~~~g~~~~~~~~ 223 (333)
T 2dg1_A 182 ---------------------------------SVANGIALSTDEK-----VLWVTETTANRLHRIALEDDGVTIQPFGA 223 (333)
T ss_dssp ---------------------------------SSEEEEEECTTSS-----EEEEEEGGGTEEEEEEECTTSSSEEEEEE
T ss_pred ---------------------------------CcccceEECCCCC-----EEEEEeCCCCeEEEEEecCCCcCcccccc
Confidence 0123344555544 44 4555678999999863 32221
Q ss_pred ----EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCC------CeEEEEEc-CCceEEEE
Q psy467 317 ----TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWG------KVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 317 ----tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~------~VtsVafS-dg~lLaaS 380 (845)
.+.++ ..+..++++++|++.++...++ |.+||. .++.+..+..+.. .+.+++|+ |++.|.++
T Consensus 224 ~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~ 297 (333)
T 2dg1_A 224 TIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIIC 297 (333)
T ss_dssp EEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEE
T ss_pred eEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEE
Confidence 12222 4678899999999888777777 999998 5666776655433 68999999 76665544
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.64 E-value=4.3e-15 Score=180.06 Aligned_cols=254 Identities=11% Similarity=0.076 Sum_probs=171.5
Q ss_pred CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC-----eEEEEEccCCCEEEEEECC---------CeE
Q psy467 59 TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS-----ITSVDFHPYGDYLCSGSLD---------SFI 124 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~-----V~~lafspdg~~Lasgs~D---------G~I 124 (845)
....+++|+||+++|+++ |++|++||+.+++....+.+|... ...++|||||++|+.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 346689999999988886 999999999999988888776543 2347899999999998876 567
Q ss_pred EEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCC---------
Q psy467 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP--------- 195 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~--------- 195 (845)
.+||+.+++.. .+..+...+...+|||||+.||.+. ++.|++ ||+.++........
T Consensus 95 ~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~-------------~~~~~~~~~~lt~~g~~~~~~~g 159 (740)
T 4a5s_A 95 DIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYV-------------KIEPNLPSYRITWTGKEDIIYNG 159 (740)
T ss_dssp EEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEE-------------ESSTTSCCEECCSCCBTTTEEES
T ss_pred EEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEE-------------EECCCCceEEEcCCCCccceecC
Confidence 79999988754 4566778899999999999998884 678998 99887765322111
Q ss_pred -----------CCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCC
Q psy467 196 -----------QYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS 264 (845)
Q Consensus 196 -----------~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~ 264 (845)
.....+.|||||+.++........ +.+ ..+.+.....
T Consensus 160 ~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~-----v~~---------------------------~~~~~~~~~~ 207 (740)
T 4a5s_A 160 ITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTE-----VPL---------------------------IEYSFYSDES 207 (740)
T ss_dssp BCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTT-----CCE---------------------------EEEEECCSTT
T ss_pred cccccccchhcCCCcceEECCCCCEEEEEEEcccC-----Cce---------------------------EEEEeecCCC
Confidence 111236677777766654332221 001 1121111110
Q ss_pred cCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC---C---eEEEEec-----CCCCCEEEEEEeCC
Q psy467 265 LNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK---F---SLVSTTE-----KNSSTIRRLTFSEG 333 (845)
Q Consensus 265 ~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s---~---~~l~tl~-----gh~~~VtslafSpd 333 (845)
.....+..+.+.+.|.. .....|++||+.+ + +...... +|...+..++||||
T Consensus 208 --------~~~~~~~~~~yp~~G~~---------~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspd 270 (740)
T 4a5s_A 208 --------LQYPKTVRVPYPKAGAV---------NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQ 270 (740)
T ss_dssp --------CSSCEEEEEECCBTTSC---------CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEET
T ss_pred --------CCCCcceeecCCCCcCc---------CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCC
Confidence 11233455666666641 1123689999998 7 4433222 37778999999999
Q ss_pred CCEEEEEeC----CC-EEEEEecCCc----eE--EEe--cCCCCCeE-----EEEEc-CCceEE
Q psy467 334 GECLLGGDT----EG-LKVYGWEPAR----QY--DAQ--PMGWGKVQ-----DLAVT-GTQLWF 378 (845)
Q Consensus 334 G~~Lasgs~----DG-I~IWDl~tgk----~l--~tl--~~h~~~Vt-----sVafS-dg~lLa 378 (845)
|+.++.... +. |.+||+.+++ +. ..+ ..|...|. .++|+ ||+.|+
T Consensus 271 g~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 271 ERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp TEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred CeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 997765532 22 9999999987 33 222 44665554 78999 998766
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.9e-14 Score=156.90 Aligned_cols=162 Identities=11% Similarity=0.005 Sum_probs=119.6
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEE--cCCCCEEEEEE------------
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF--GNGEETLSAGC------------ 77 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLaf--Spdg~~LaSgs------------ 77 (845)
.+|...+.+++|+| +|+.|++++.++.|++||+.+++....+..+...+....| ++++.+++...
T Consensus 77 ~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 77 EGRGDNTFGGFLSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp CSSCBCSSSCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred eCCCCCccceEEcC-CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccccc
Confidence 34555556789999 9999999999999999999999887777766665654444 89999887532
Q ss_pred ----------CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc-CCCEEEEEECC------CeEEEEECCCCceEEEEcC
Q psy467 78 ----------QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLD------SFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 78 ----------~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~D------G~I~IWDl~t~~~l~~~~~ 140 (845)
.++.|.+||+.+++..... .+...+..++|+| ||+.|+.+..+ ..|.++|+..+.. ..+..
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~ 233 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKT 233 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCC
T ss_pred chhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeee
Confidence 3468999999998755444 4667789999999 99988877753 3788888865543 44443
Q ss_pred CC--CCeEEEEEecCCCEEEEEeC-CC----cEEEeeeeccCCceeEEEECCCCcc
Q psy467 141 HS--KSINSIRFSPDGQWIASGGE-DG----VVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 141 h~--~~V~sLafSPdg~~Lasgs~-DG----~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
+. ..+..++|+|||+.|+..+. ++ .|++ ||+.+++.
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~-------------~d~~~g~~ 276 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYS-------------ADPETLEN 276 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEE-------------ECTTTCCE
T ss_pred CCCCcccccceECCCCCEEEEEecCCCCCcceEEE-------------EecCCCce
Confidence 43 24778899999997765443 22 2666 99988764
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-13 Score=146.21 Aligned_cols=245 Identities=10% Similarity=0.004 Sum_probs=175.1
Q ss_pred eEEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
+..+..+.....+++|+| +|+ +++++..++.|..|+..++ ...+..+...+.+++++++|+++++...++.|.+||
T Consensus 20 ~~~l~~~~~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CEEEECCCSSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EEEEecCCccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 456667778899999999 777 8888888999999999877 666777788899999999999887776678999999
Q ss_pred CCCCcEEEEEcCC----CCCeEEEEEccCCCEEEEE----E-------------CCCeEEEEECCCCceEEEEcCCCCCe
Q psy467 87 LAVPTVQRTLNGH----KSSITSVDFHPYGDYLCSG----S-------------LDSFIKLWDLRRKGCIYTYRGHSKSI 145 (845)
Q Consensus 87 l~tg~~v~~l~~h----~~~V~~lafspdg~~Lasg----s-------------~DG~I~IWDl~t~~~l~~~~~h~~~V 145 (845)
..+++........ ...+..++++|+|+++++. + ..+.|..++.. ++ +..+..+....
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~ 174 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKP 174 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCC
Confidence 9888765443221 2346789999999988873 2 13456666654 44 34445566678
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeE-EEEecCCCCCccce
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR-KSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l-~~~~~h~~~~~~~~ 224 (845)
..++|+|+++.+++.+.++.|.+ ||+..... + ....
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~-------------~~~~~~g~--------------------~~~~~~---------- 211 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHR-------------YCLNARGE--------------------TEYQGV---------- 211 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEE-------------EEECSSSC--------------------EEEEEE----------
T ss_pred ccEEECCCCCEEEEeCCCCeEEE-------------EEECCCCc--------------------CcCCCe----------
Confidence 99999999998877777788888 88762111 1 0000
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ +.. . ...+..++++++|+ ++++. ++.|
T Consensus 212 --~-------------------------------~~~-~-----------~~~p~~i~~d~~G~-----l~v~~--~~~v 239 (296)
T 3e5z_A 212 --H-------------------------------FTV-E-----------PGKTDGLRVDAGGL-----IWASA--GDGV 239 (296)
T ss_dssp --E-------------------------------ECC-S-----------SSCCCSEEEBTTSC-----EEEEE--TTEE
T ss_pred --E-------------------------------eeC-C-----------CCCCCeEEECCCCC-----EEEEc--CCeE
Confidence 0 000 0 01123455555555 66555 7899
Q ss_pred EEEECCCCeEEEEecCCCCCEEEEEE-eCCCCEEEEEeCCCEEEEEecCCc
Q psy467 305 NFWDLEKFSLVSTTEKNSSTIRRLTF-SEGGECLLGGDTEGLKVYGWEPAR 354 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh~~~Vtslaf-SpdG~~Lasgs~DGI~IWDl~tgk 354 (845)
.+||.. ++.+..+..+.. +++++| +|+++.|++++.+++.-++..+.+
T Consensus 240 ~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~ 288 (296)
T 3e5z_A 240 HVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRG 288 (296)
T ss_dssp EEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCB
T ss_pred EEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccccc
Confidence 999987 778888887767 999999 589999999998876556665544
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.3e-13 Score=162.65 Aligned_cols=246 Identities=7% Similarity=0.005 Sum_probs=171.0
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCC-----eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCc-------
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDK-----KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGS------- 81 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG-----~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGt------- 81 (845)
|...+.+++||| +|++||.+..++ .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 445689999999 999998776543 8999999999877643322 23678999999999999988766
Q ss_pred ---------EEEEECCCCcE--EEEE--cCCCCCeEEEEEccCCCEEEEEEC-----CCeEEEEECCC------Cc-eEE
Q psy467 82 ---------IKIWNLAVPTV--QRTL--NGHKSSITSVDFHPYGDYLCSGSL-----DSFIKLWDLRR------KG-CIY 136 (845)
Q Consensus 82 ---------V~VWDl~tg~~--v~~l--~~h~~~V~~lafspdg~~Lasgs~-----DG~I~IWDl~t------~~-~l~ 136 (845)
|.+|++.+++. ...+ ..+...+..+.|+|||++|+.++. +..|++||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 99999988752 2222 334556789999999999987764 56899999976 43 355
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS 212 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~ 212 (845)
.+..+...+.. .|+|+|+.|+..+..+ .|.+ ||+.++... ....
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~-------------~d~~~~~~~------------------~~~~ 328 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLIN-------------IDFTDPEES------------------KWKV 328 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEE-------------EETTSCCGG------------------GCEE
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEE-------------EeCCCCCcc------------------ccee
Confidence 56556555554 5889999887766533 3555 888765320 0112
Q ss_pred EecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccc
Q psy467 213 FTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCF 292 (845)
Q Consensus 213 ~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~ 292 (845)
+..+... ..+ ..+.|++++.
T Consensus 329 l~~~~~~-----~~~---------------------------~~~~~~~~~~---------------------------- 348 (710)
T 2xdw_A 329 LVPEHEK-----DVL---------------------------EWVACVRSNF---------------------------- 348 (710)
T ss_dssp EECCCSS-----CEE---------------------------EEEEEETTTE----------------------------
T ss_pred ccCCCCC-----CeE---------------------------EEEEEEcCCE----------------------------
Confidence 2222110 001 3344444443
Q ss_pred eEEEEEeCCCe--EEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEE-eC---CC-EEEEEecCCc
Q psy467 293 ILTTSSSADRT--VNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DT---EG-LKVYGWEPAR 354 (845)
Q Consensus 293 ~lLatgs~DG~--I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasg-s~---DG-I~IWDl~tgk 354 (845)
++++...|+. |++||+.+++.+..+..+.+.+..++++|+++.|+.. +. .+ |.+||+.+++
T Consensus 349 -lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 349 -LVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp -EEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred -EEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 7888888874 6677887788888888777789999999999876644 22 23 8899988876
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.4e-13 Score=146.07 Aligned_cols=243 Identities=9% Similarity=0.097 Sum_probs=174.7
Q ss_pred CCCeEEEEEcCCCCEEEEEECC------------------------CcEEEEECCCCcEEEEEc-CCCCCeEEEEEccCC
Q psy467 58 STPVESVQFGNGEETLSAGCQS------------------------GSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYG 112 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~D------------------------GtV~VWDl~tg~~v~~l~-~h~~~V~~lafspdg 112 (845)
-..+.+++++++|+++++...+ +.|.+||..+++.+..+. .+......++++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999888766 479999999998877765 344578899999999
Q ss_pred CEEEEEECCCeEEEEECCCCc-eEEEEc---------CCCCCeEEEEEec-CCCEEEEEe-CCCcEEEeeeeccCCceeE
Q psy467 113 DYLCSGSLDSFIKLWDLRRKG-CIYTYR---------GHSKSINSIRFSP-DGQWIASGG-EDGVVRIGASFHLTNTSIH 180 (845)
Q Consensus 113 ~~Lasgs~DG~I~IWDl~t~~-~l~~~~---------~h~~~V~sLafSP-dg~~Lasgs-~DG~I~I~~~~~~~~~~I~ 180 (845)
+++++...++.|++||..... .+..+. .+-....+++++| +++++++.+ .++.|++
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~------------ 170 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQ------------ 170 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEE------------
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEE------------
Confidence 988888888999999986432 555552 3344689999999 788877776 6888988
Q ss_pred EEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEc
Q psy467 181 VVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQ 260 (845)
Q Consensus 181 vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fs 260 (845)
|| .++.. +..+...... .
T Consensus 171 -~~-~~g~~--------------------~~~~~~~g~~-------~--------------------------------- 188 (329)
T 3fvz_A 171 -FS-PSGKF--------------------VTQWGEESSG-------S--------------------------------- 188 (329)
T ss_dssp -EC-TTSCE--------------------EEEECEECCS-------S---------------------------------
T ss_pred -Ec-CCCCE--------------------EEEeccCCCC-------C---------------------------------
Confidence 88 33443 3332211100 0
Q ss_pred CCCCcCCCCcccccccCceeEEEcCC-CCcccceEEEEEeCCCeEEEEECCCCeEEEEec--CCCCCEEEEEEeCCCCEE
Q psy467 261 PHRSLNRSGTCVPVSVSRTSLSILPQ-SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE--KNSSTIRRLTFSEGGECL 337 (845)
Q Consensus 261 pdg~~~~~~~~~~~~~~I~slafSPd-g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~--gh~~~VtslafSpdG~~L 337 (845)
............++++|+ +. ++++...++.|++||..+++.+..+. .+...+.+++|+| |..+
T Consensus 189 --------~~~~~~~~~p~gia~d~~~g~-----l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~ 254 (329)
T 3fvz_A 189 --------SPRPGQFSVPHSLALVPHLDQ-----LCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLF 254 (329)
T ss_dssp --------SCCTTEESCEEEEEEETTTTE-----EEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEE
T ss_pred --------CCCCcccCCCcEEEEECCCCE-----EEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEE
Confidence 000000122345666665 44 78888889999999999899888885 4566789999999 3333
Q ss_pred EE-------EeCCC-EEEEEecCCceEEEec---CCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 338 LG-------GDTEG-LKVYGWEPARQYDAQP---MGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 338 as-------gs~DG-I~IWDl~tgk~l~tl~---~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
++ ...+. |++|+..+++.+..+. .+...+.+++++ +|.++++. |..|..++
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 33 23344 9999999999998874 677789999999 88655555 78887654
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.59 E-value=3.5e-12 Score=137.71 Aligned_cols=243 Identities=10% Similarity=0.042 Sum_probs=167.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC----CcEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS----GSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D----GtV~V 84 (845)
..+.++...+.+++|++ +|++++++..++.|.+||..+++.......+...+.+++|+++++++++...+ +.|.+
T Consensus 38 ~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred EEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 45667778899999998 88988888889999999998887665554567789999999999988877666 68999
Q ss_pred EECCCCcEEEEEc--CCCCCeEEEEEccCCCEEEEEEC------CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCE
Q psy467 85 WNLAVPTVQRTLN--GHKSSITSVDFHPYGDYLCSGSL------DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 85 WDl~tg~~v~~l~--~h~~~V~~lafspdg~~Lasgs~------DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
||.+++.....+. .+...+.+++++|+|+.+++... .+.|..||..+++... +......+.+++|+|+|+.
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKV 195 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSE
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCE
Confidence 9998877554443 24457899999999987776653 3556667765544433 2223345789999999986
Q ss_pred EEEE-eCCCcEEEeeeeccCCceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 157 IASG-GEDGVVRIGASFHLTNTSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 157 Lasg-s~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
++.+ +.++.|.+ ||+.+ +.. +..+... +
T Consensus 196 l~v~~~~~~~i~~-------------~d~~~~g~~--------------------~~~~~~~----------~------- 225 (333)
T 2dg1_A 196 LWVTETTANRLHR-------------IALEDDGVT--------------------IQPFGAT----------I------- 225 (333)
T ss_dssp EEEEEGGGTEEEE-------------EEECTTSSS--------------------EEEEEEE----------E-------
T ss_pred EEEEeCCCCeEEE-------------EEecCCCcC--------------------cccccce----------E-------
Confidence 6544 45778888 98763 332 1111000 0
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
...+. +. ..+..++++++|+ ++++...++.|.+||. +++.
T Consensus 226 ---------------------~~~~~--~~-----------~~~~~i~~d~~G~-----l~v~~~~~~~v~~~d~-~g~~ 265 (333)
T 2dg1_A 226 ---------------------PYYFT--GH-----------EGPDSCCIDSDDN-----LYVAMYGQGRVLVFNK-RGYP 265 (333)
T ss_dssp ---------------------EEECC--SS-----------SEEEEEEEBTTCC-----EEEEEETTTEEEEECT-TSCE
T ss_pred ---------------------EEecC--CC-----------CCCCceEECCCCC-----EEEEEcCCCEEEEECC-CCCE
Confidence 00000 00 1123455555555 7777777899999998 4666
Q ss_pred EEEecCCCC------CEEEEEEeCCCCEEEEEeCC
Q psy467 315 VSTTEKNSS------TIRRLTFSEGGECLLGGDTE 343 (845)
Q Consensus 315 l~tl~gh~~------~VtslafSpdG~~Lasgs~D 343 (845)
+..+..+.. .+.+++|++||+.|++++.+
T Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 266 IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 666654432 68999999998877766554
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.5e-11 Score=127.73 Aligned_cols=269 Identities=9% Similarity=0.038 Sum_probs=183.6
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE-ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS-LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~-l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
.+..+...+.++++++ +|+++++...++.|.+||.. ++.... ...+...+.++++++++..+++...++.|..||..
T Consensus 9 ~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSD-KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp ECCSSSCCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred cCCCcCCCccceEECC-CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 4556677899999999 88877776667899999987 544332 23356789999999999988777668899999986
Q ss_pred CCcEE-EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 89 VPTVQ-RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 89 tg~~v-~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
++.. ..+......+.++++.++++.+++...++.|..||. +++.... .......+.+++++++|+++++...++.|
T Consensus 87 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 -GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp -SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred -CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 4432 222234557899999999988777777889999998 5554432 22344578999999999877776667788
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
.. ||. +++. .. +.....
T Consensus 165 ~~-------------~~~-~g~~--------------------~~-~~~~~~---------------------------- 181 (299)
T 2z2n_A 165 GR-------------ITE-SGDI--------------------TE-FKIPTP---------------------------- 181 (299)
T ss_dssp EE-------------ECT-TCCE--------------------EE-EECSST----------------------------
T ss_pred EE-------------EcC-CCcE--------------------EE-eeCCCC----------------------------
Confidence 88 887 4433 11 100000
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE-ecCCCCCE
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST-TEKNSSTI 325 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t-l~gh~~~V 325 (845)
...+..++++++|. ++++...++.|.+||. +++.... +..+...+
T Consensus 182 ----------------------------~~~~~~i~~~~~g~-----l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 227 (299)
T 2z2n_A 182 ----------------------------ASGPVGITKGNDDA-----LWFVEIIGNKIGRITT-SGEITEFKIPTPNARP 227 (299)
T ss_dssp ----------------------------TCCEEEEEECTTSS-----EEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred ----------------------------CCcceeEEECCCCC-----EEEEccCCceEEEECC-CCcEEEEECCCCCCCc
Confidence 01123344444444 7777667889999999 6654332 33345679
Q ss_pred EEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEE-ecCCCCCeEEEEEcCCceEEEE
Q psy467 326 RRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDA-QPMGWGKVQDLAVTGTQLWFRR 380 (845)
Q Consensus 326 tslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~t-l~~h~~~VtsVafSdg~lLaaS 380 (845)
.+++++++|++.++...++ |.+||. +++.... +..+...+.++++.+|+++++.
T Consensus 228 ~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~g~l~v~~ 283 (299)
T 2z2n_A 228 HAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICFDGETIWFAM 283 (299)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEECSSCEEEEE
T ss_pred eeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEecCCCEEEEe
Confidence 9999999999666654556 999998 4543222 3345567899988656665554
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.58 E-value=8.2e-13 Score=141.22 Aligned_cols=242 Identities=12% Similarity=0.049 Sum_probs=184.9
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCC-CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCC-CCeE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHS-TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK-SSIT 104 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~-~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~-~~V~ 104 (845)
.+++|++++.++.|.+||.++++.+.++..+. ..+.++.++|+|++|+ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 36889999999999999999999999998776 5789999999999888 35788999999 799999988653 4788
Q ss_pred EEEEccCCCEEEEEEC-CCeEEEEECCCCceEEEEcC------CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCc
Q psy467 105 SVDFHPYGDYLCSGSL-DSFIKLWDLRRKGCIYTYRG------HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNT 177 (845)
Q Consensus 105 ~lafspdg~~Lasgs~-DG~I~IWDl~t~~~l~~~~~------h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~ 177 (845)
++.+.++|+++++.+. ++.|..+|. +++.+..+.. +......+++.++|+++++...++.|..
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~--------- 150 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE--------- 150 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEE---------
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEE---------
Confidence 9999999999999887 778888886 6787777652 1123556778999999999999999999
Q ss_pred eeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeE
Q psy467 178 SIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSA 257 (845)
Q Consensus 178 ~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l 257 (845)
||.. |+. +..+...... ...
T Consensus 151 ----~d~~-G~~--------------------~w~~~~~~~~-----------------------------------~~~ 170 (276)
T 3no2_A 151 ----IAPN-GQL--------------------LNSVKLSGTP-----------------------------------FSS 170 (276)
T ss_dssp ----ECTT-SCE--------------------EEEEECSSCC-----------------------------------CEE
T ss_pred ----ECCC-CCE--------------------EEEEECCCCc-----------------------------------cce
Confidence 9987 776 4444332111 334
Q ss_pred EEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC------CCEEEEEEe
Q psy467 258 IFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS------STIRRLTFS 331 (845)
Q Consensus 258 ~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~------~~VtslafS 331 (845)
...+++. ++++++.++.|..+|..+++.+.++..+. ..+..++..
T Consensus 171 ~~~~~g~-----------------------------~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~ 221 (276)
T 3no2_A 171 AFLDNGD-----------------------------CLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL 221 (276)
T ss_dssp EECTTSC-----------------------------EEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC
T ss_pred eEcCCCC-----------------------------EEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEc
Confidence 4445555 88888888899999999999999886432 237889999
Q ss_pred CCCCEEEEEeCC--------C-EEEEEe-cCCceEEEecCCC--CCeEEEE
Q psy467 332 EGGECLLGGDTE--------G-LKVYGW-EPARQYDAQPMGW--GKVQDLA 370 (845)
Q Consensus 332 pdG~~Lasgs~D--------G-I~IWDl-~tgk~l~tl~~h~--~~VtsVa 370 (845)
++|..+++.... + .+++.+ .+++.+-.+..+. +.+++++
T Consensus 222 ~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~ 272 (276)
T 3no2_A 222 QNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTIC 272 (276)
T ss_dssp TTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEEE
T ss_pred CCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcccccceeeee
Confidence 999999887522 2 467777 4667766665433 4565554
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=5.9e-13 Score=160.40 Aligned_cols=258 Identities=10% Similarity=0.033 Sum_probs=171.2
Q ss_pred cCCCCEEEEEeCC-C----eEEEEECCCCeeEEEec------CCCCCeEEEEEcCCCCEEEEEECCC-----cEEEEECC
Q psy467 25 KKSGQVLATGGDD-K----KVNLWALGKSNCIMSLS------GHSTPVESVQFGNGEETLSAGCQSG-----SIKIWNLA 88 (845)
Q Consensus 25 p~dg~~LaTgs~D-G----~I~IWdl~t~~~i~~l~------~h~~~V~sLafSpdg~~LaSgs~DG-----tV~VWDl~ 88 (845)
| +|++++....+ + .|.+.+..+++....+. +|...+..++|||||++||.+..++ .|++||+.
T Consensus 81 ~-dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~ 159 (710)
T 2xdw_A 81 K-KGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD 159 (710)
T ss_dssp E-ETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT
T ss_pred E-ECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC
Confidence 6 77777765432 2 34444444444332221 2444688999999999998876543 89999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCe----------------EEEEECCCCce----EEEEcCCCCCeEEE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF----------------IKLWDLRRKGC----IYTYRGHSKSINSI 148 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~----------------I~IWDl~t~~~----l~~~~~h~~~V~sL 148 (845)
+++.+.....+ ..+..++|+|||+.|+.++.++. |++|++.++.. +.....+...+..+
T Consensus 160 tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 160 GAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 99876543222 23678999999999999887765 99999988752 22222345567899
Q ss_pred EEecCCCEEEEEeC-----CCcEEEeeeeccCCceeEEEECCC------CccCCCCCCCCCcceeecCCCCeEEEEecCC
Q psy467 149 RFSPDGQWIASGGE-----DGVVRIGASFHLTNTSIHVVDLSL------VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 149 afSPdg~~Lasgs~-----DG~I~I~~~~~~~~~~I~vWDl~t------g~~l~~~~~~~i~svs~spdg~~l~~~~~h~ 217 (845)
.|+|||++|+.++. +..+++ ||+.+ +.. ....+..+.
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~-------------~d~~~~~~~~~~~~-------------------~~~~l~~~~ 286 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWY-------------CDLQQESNGITGIL-------------------KWVKLIDNF 286 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEE-------------EEGGGSSSSSCSSC-------------------CCEEEECSS
T ss_pred EEcCCCCEEEEEEEccCCCccEEEE-------------EECcccccccCCcc-------------------ceEEeeCCC
Confidence 99999999887764 445666 88865 211 012222222
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS 297 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat 297 (845)
.. ....|++++. .|+.
T Consensus 287 ~~-----------------------------------~~~~~s~dg~-----------------------------~l~~ 302 (710)
T 2xdw_A 287 EG-----------------------------------EYDYVTNEGT-----------------------------VFTF 302 (710)
T ss_dssp SS-----------------------------------CEEEEEEETT-----------------------------EEEE
T ss_pred Cc-----------------------------------EEEEEeccCC-----------------------------EEEE
Confidence 21 1123445544 4444
Q ss_pred EeC----CCeEEEEECCCCe--EEEEecCCCC--CEEEEEEeCCCCEEEEEeCCC---EEEEEecCCceEEEecCCCCCe
Q psy467 298 SSA----DRTVNFWDLEKFS--LVSTTEKNSS--TIRRLTFSEGGECLLGGDTEG---LKVYGWEPARQYDAQPMGWGKV 366 (845)
Q Consensus 298 gs~----DG~I~IWDl~s~~--~l~tl~gh~~--~VtslafSpdG~~Lasgs~DG---I~IWDl~tgk~l~tl~~h~~~V 366 (845)
.+. .+.|.+||+.++. ....+..|.. .+..++|++++.++++...++ |.+|++.+++.+..+..+.+.|
T Consensus 303 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v 382 (710)
T 2xdw_A 303 KTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSV 382 (710)
T ss_dssp EECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEE
T ss_pred EECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceE
Confidence 443 3469999998764 2234444433 688899998888888888888 5666766788888888888889
Q ss_pred EEEEEc-CCceEEEE
Q psy467 367 QDLAVT-GTQLWFRR 380 (845)
Q Consensus 367 tsVafS-dg~lLaaS 380 (845)
..++++ ++..++.+
T Consensus 383 ~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 383 VGYSGQKKDTEIFYQ 397 (710)
T ss_dssp EEEECCTTCSEEEEE
T ss_pred EEEecCCCCCEEEEE
Confidence 999999 77666644
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=3.9e-12 Score=134.42 Aligned_cols=232 Identities=11% Similarity=0.116 Sum_probs=167.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC------CCCCeEEEEEc-cCCCEEEEEEC-CCeEEEE
Q psy467 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG------HKSSITSVDFH-PYGDYLCSGSL-DSFIKLW 127 (845)
Q Consensus 56 ~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~------h~~~V~~lafs-pdg~~Lasgs~-DG~I~IW 127 (845)
++-..+.+++++++++++++...++.|.+||.. ++.+..+.. +...+.++++. ++++++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455679999999999988888889999999987 666666642 33568899994 66665555533 8899999
Q ss_pred ECCCCceEEEEcC-CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCC
Q psy467 128 DLRRKGCIYTYRG-HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHN 206 (845)
Q Consensus 128 Dl~t~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spd 206 (845)
| .+++.+..+.. +...+.+++++++|+++++...++.|.+ ||.. ++.
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~-------------~~~~-g~~----------------- 153 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVII-------------FDQN-GNV----------------- 153 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEE-------------ECTT-SCE-----------------
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEE-------------EcCC-CCE-----------------
Confidence 9 56777776643 3457899999999998877777888988 8853 332
Q ss_pred CCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 207 TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 207 g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
+..+..... ...+..++++++
T Consensus 154 ---~~~~~~~~~--------------------------------------------------------~~~p~~i~~~~~ 174 (286)
T 1q7f_A 154 ---LHKFGCSKH--------------------------------------------------------LEFPNGVVVNDK 174 (286)
T ss_dssp ---EEEEECTTT--------------------------------------------------------CSSEEEEEECSS
T ss_pred ---EEEeCCCCc--------------------------------------------------------cCCcEEEEECCC
Confidence 222211000 012334555555
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC--CCCEEEEEEeCCCCEEEEEeCC-C-EEEEEecCCceEEEecCC
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN--SSTIRRLTFSEGGECLLGGDTE-G-LKVYGWEPARQYDAQPMG 362 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh--~~~VtslafSpdG~~Lasgs~D-G-I~IWDl~tgk~l~tl~~h 362 (845)
|+ ++++...++.|++||.. ++.+..+..+ ...+..++++++|+++++...+ + |.+|+. +++.+..+..+
T Consensus 175 g~-----l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~ 247 (286)
T 1q7f_A 175 QE-----IFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESK 247 (286)
T ss_dssp SE-----EEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEES
T ss_pred CC-----EEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEccc
Confidence 54 78888889999999974 5666666543 3578999999999988888766 3 999994 56777776654
Q ss_pred C--CCeEEEEEc-CCceEEEE----EEEEee
Q psy467 363 W--GKVQDLAVT-GTQLWFRR----VGTWSH 386 (845)
Q Consensus 363 ~--~~VtsVafS-dg~lLaaS----VsiW~~ 386 (845)
. ..+.+++++ +|++++++ |.+|..
T Consensus 248 ~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~ 278 (286)
T 1q7f_A 248 VKHAQCFDVALMDDGSVVLASKDYRLYIYRY 278 (286)
T ss_dssp SCCSCEEEEEEETTTEEEEEETTTEEEEEEC
T ss_pred CCCCcceeEEECCCCcEEEECCCCeEEEEEc
Confidence 3 347899999 88877776 888864
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.55 E-value=7.7e-13 Score=143.39 Aligned_cols=243 Identities=11% Similarity=0.065 Sum_probs=154.9
Q ss_pred CcEEEEEEecCCCCEEEEEeCC---C--eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC-----------
Q psy467 16 ASVNCLALGKKSGQVLATGGDD---K--KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS----------- 79 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~D---G--~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D----------- 79 (845)
..+.+++||| +|++||.++.+ + .|.+|++.+++.......+ . +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred ccCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 4688899999 99988887653 3 4888888887766555433 3 9999999999999888642
Q ss_pred ----------------CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC-------eEEEEECCCCceEE
Q psy467 80 ----------------GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS-------FIKLWDLRRKGCIY 136 (845)
Q Consensus 80 ----------------GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG-------~I~IWDl~t~~~l~ 136 (845)
..|.+||+.+++.+..+.. . .+..++|+||| .++++..++ ...+|.+.+++. .
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~ 211 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-E 211 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-E
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-E
Confidence 5799999998876455544 3 78899999999 777776542 334444434443 3
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecC
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h 216 (845)
.+..+ ..+..+ +|||++|+.++.++.-. ......+++|| +++. ......+
T Consensus 212 ~l~~~-~~~~~~--spdg~~l~~~~~~~~~~-----~~~~~~l~~~d--~~~~--------------------~~l~~~~ 261 (347)
T 2gop_A 212 KMFEK-VSFYAV--DSDGERILLYGKPEKKY-----MSEHNKLYIYD--GKEV--------------------MGILDEV 261 (347)
T ss_dssp EEEEE-ESEEEE--EECSSCEEEEECCSSSC-----CCSSCEEEEEC--SSCE--------------------EESSTTC
T ss_pred EeccC-cceeeE--CCCCCEEEEEEccccCC-----ccccceEEEEC--CCce--------------------EeccccC
Confidence 44334 445444 99999888877543100 00011222266 3332 1111111
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
... + .. .++|+ |+ +++
T Consensus 262 ~~~-------~---------------------------~~-----------------------~~~~s-dg------~~~ 277 (347)
T 2gop_A 262 DRG-------V---------------------------GQ-----------------------AKIKD-GK------VYF 277 (347)
T ss_dssp CSE-------E---------------------------EE-----------------------EEEET-TE------EEE
T ss_pred Ccc-------c---------------------------CC-----------------------ccEEc-Cc------EEE
Confidence 111 1 21 13344 32 577
Q ss_pred EEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC--EEEEEecCCceEEEecCCCCC
Q psy467 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--LKVYGWEPARQYDAQPMGWGK 365 (845)
Q Consensus 297 tgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk~l~tl~~h~~~ 365 (845)
+++.++.++|| +.+++....+ .+.+.|.+++|+| .++++++.++ ..||.++ ++ ...+..|...
T Consensus 278 ~~~~~~~~~l~-~~~g~~~~~~-~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 278 TLFEEGSVNLY-IWDGEIKPIA-KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp EEEETTEEEEE-EESSSEEEEE-CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred EEecCCcEEEE-EcCCceEEEe-cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 78889999999 8766654444 4477899999999 6777777666 4888887 54 4556655543
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-13 Score=152.09 Aligned_cols=165 Identities=6% Similarity=-0.076 Sum_probs=115.1
Q ss_pred EEeccCCCcEE-EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEE-------------------EEEcC
Q psy467 9 EDFMAHGASVN-CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES-------------------VQFGN 68 (845)
Q Consensus 9 ~~L~gH~~~V~-~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~s-------------------LafSp 68 (845)
..+..+...+. ++.|+| +|++|+.++.++.|++|++.+++.......+...... +.|+|
T Consensus 73 ~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp 151 (396)
T 3c5m_A 73 VQLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP 151 (396)
T ss_dssp EECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred EEeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC
Confidence 34444444433 488999 9999999999999999999888766655544442222 34677
Q ss_pred CCCEEEEE-----ECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc-CCCEEEEEECC------CeEEEEECCCCceEE
Q psy467 69 GEETLSAG-----CQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLD------SFIKLWDLRRKGCIY 136 (845)
Q Consensus 69 dg~~LaSg-----s~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~D------G~I~IWDl~t~~~l~ 136 (845)
+++.++.+ ..+..|.+||+.+++..... .+...+..+.|+| +++.|+.++.+ ..|.+||+..+.. .
T Consensus 152 dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~ 229 (396)
T 3c5m_A 152 LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-R 229 (396)
T ss_dssp CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-E
T ss_pred CCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-e
Confidence 77766554 35678999999988765555 3667789999999 78877766543 3688999876543 3
Q ss_pred EEcCC--CCCeEEEEEecCCCEEEEEeCC-----CcEEEeeeeccCCceeEEEECCCCcc
Q psy467 137 TYRGH--SKSINSIRFSPDGQWIASGGED-----GVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 137 ~~~~h--~~~V~sLafSPdg~~Lasgs~D-----G~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.+..+ ...+..++|+|||++|+.++.+ +.|++ ||+.+++.
T Consensus 230 ~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~-------------~d~~~g~~ 276 (396)
T 3c5m_A 230 KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK-------------ANPETLEN 276 (396)
T ss_dssp ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE-------------ECTTTCCE
T ss_pred EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEE-------------EECCCCCe
Confidence 33323 2257789999999987776543 23666 99877654
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.54 E-value=6.8e-13 Score=138.51 Aligned_cols=239 Identities=6% Similarity=-0.043 Sum_probs=162.1
Q ss_pred cEEEEEEecCCCCEEE-EEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 17 SVNCLALGKKSGQVLA-TGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 17 ~V~~LafSp~dg~~La-Tgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
...++++++ +|++++ +...++.|.+|+..+.........+...+.+++++++++.+++.. ++.|.+||...... ..
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~ 101 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TV 101 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EE
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-ee
Confidence 788999999 888777 446788999999765543322233445788999999998666654 88999999876543 33
Q ss_pred Ec-CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeecc
Q psy467 96 LN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 96 l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~ 174 (845)
+. .....+.+++++++|+.+++...++.|.+|+..+.............+.+++++++|+++++...++.|.+
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~------ 175 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK------ 175 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEE------
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEE------
Confidence 32 23356899999999987777777889999987655443322233346788999999997777666788888
Q ss_pred CCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCc
Q psy467 175 TNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCD 254 (845)
Q Consensus 175 ~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~ 254 (845)
||...... ......+.
T Consensus 176 -------~~~~~~~~--------------------~~~~~~~~------------------------------------- 191 (270)
T 1rwi_B 176 -------LEAESNNQ--------------------VVLPFTDI------------------------------------- 191 (270)
T ss_dssp -------ECTTTCCE--------------------EECCCSSC-------------------------------------
T ss_pred -------EecCCCce--------------------EeecccCC-------------------------------------
Confidence 88764433 11000000
Q ss_pred eeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCC
Q psy467 255 YSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334 (845)
Q Consensus 255 ~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG 334 (845)
..+..++++++|. ++++...++.|.+||............+...+.+++++++|
T Consensus 192 ---------------------~~p~~i~~d~~g~-----l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g 245 (270)
T 1rwi_B 192 ---------------------TAPWGIAVDEAGT-----VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDR 245 (270)
T ss_dssp ---------------------CSEEEEEECTTCC-----EEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTC
T ss_pred ---------------------CCceEEEECCCCC-----EEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCC
Confidence 1123344444443 77777778899999987654433222334578999999999
Q ss_pred CEEEEEeCCC-EEEEEecCCc
Q psy467 335 ECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 335 ~~Lasgs~DG-I~IWDl~tgk 354 (845)
+++++...++ |++|++...+
T Consensus 246 ~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 246 TVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CEEEEEGGGTEEEEECCCGGG
T ss_pred CEEEEECCCCEEEEEcCCCcc
Confidence 9888877788 9999987654
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.5e-12 Score=135.85 Aligned_cols=251 Identities=12% Similarity=0.077 Sum_probs=164.2
Q ss_pred CeeEEEecCCCCCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEE
Q psy467 48 SNCIMSLSGHSTPVESVQFGNGEE-TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126 (845)
Q Consensus 48 ~~~i~~l~~h~~~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~I 126 (845)
+..+..+..+.....+++|+|+++ .++++..++.|..||..++ ...+..+...+.+++++++|+++++...++.|.+
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 344455656677789999999998 7778888999999999987 5666667778999999999998777767789999
Q ss_pred EECCCCceEEEEcCC----CCCeEEEEEecCCCEEEEEeCCCcEEEee----eeccCCceeEEEECCCCccCCCCCCCCC
Q psy467 127 WDLRRKGCIYTYRGH----SKSINSIRFSPDGQWIASGGEDGVVRIGA----SFHLTNTSIHVVDLSLVHPLGTPPPQYT 198 (845)
Q Consensus 127 WDl~t~~~l~~~~~h----~~~V~sLafSPdg~~Lasgs~DG~I~I~~----~~~~~~~~I~vWDl~tg~~l~~~~~~~i 198 (845)
||..+++........ ...+.+++++|+|+++++....|....+. ......+.++.++.. ++.
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~--------- 164 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL--------- 164 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE---------
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE---------
Confidence 999887755433221 23467899999999877743211110000 000000011113322 111
Q ss_pred cceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCc
Q psy467 199 SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSR 278 (845)
Q Consensus 199 ~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I 278 (845)
..+..+. ...
T Consensus 165 ------------~~~~~~~----------------------------------------------------------~~~ 174 (296)
T 3e5z_A 165 ------------SAPIRDR----------------------------------------------------------VKP 174 (296)
T ss_dssp ------------EEEECCC----------------------------------------------------------SSE
T ss_pred ------------EEeecCC----------------------------------------------------------CCC
Confidence 1111110 112
Q ss_pred eeEEEcCCCCcccceEEEEEeCCCeEEEEECC-CCeE---EEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCc
Q psy467 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLE-KFSL---VSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPAR 354 (845)
Q Consensus 279 ~slafSPdg~~~~~~lLatgs~DG~I~IWDl~-s~~~---l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk 354 (845)
..++|+|+++ ++++.+.++.|++||+. +++. ...+..+...+..++++++|++.++. .++|.+|+.+ ++
T Consensus 175 ~gi~~s~dg~-----~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~ 247 (296)
T 3e5z_A 175 NGLAFLPSGN-----LLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GD 247 (296)
T ss_dssp EEEEECTTSC-----EEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SC
T ss_pred ccEEECCCCC-----EEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CC
Confidence 4455666665 67777788999999986 5554 33443345567889999999976666 3339999986 78
Q ss_pred eEEEecCCCCCeEEEEEc--CCceEEEE--EEEEeeCC
Q psy467 355 QYDAQPMGWGKVQDLAVT--GTQLWFRR--VGTWSHQD 388 (845)
Q Consensus 355 ~l~tl~~h~~~VtsVafS--dg~lLaaS--VsiW~~d~ 388 (845)
.+..+..+.. +++++|. +++.|.++ -.+|.++.
T Consensus 248 ~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~ 284 (296)
T 3e5z_A 248 ELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIET 284 (296)
T ss_dssp EEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEEC
T ss_pred EEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEc
Confidence 8888887777 9999995 66766655 45665443
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=2.8e-12 Score=142.16 Aligned_cols=270 Identities=14% Similarity=0.006 Sum_probs=171.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeC----------CCeEEEEECCCCeeEEEecCC------CCCeEEEEEcCCCCE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGD----------DKKVNLWALGKSNCIMSLSGH------STPVESVQFGNGEET 72 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~----------DG~I~IWdl~t~~~i~~l~~h------~~~V~sLafSpdg~~ 72 (845)
.++..+..+ .++|+| +|+++++++. ++.|.+||..+++.+.++... ......++|+|||++
T Consensus 45 ~~i~~g~~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 45 GMVPTAFNG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEEECCEEE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EEecCCCCC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 455555555 899999 9999998863 568999999999888877532 345778999999999
Q ss_pred EEEEEC--CCcEEEEECCCCcEEEE-EcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCC-CceEEEE------cCC
Q psy467 73 LSAGCQ--SGSIKIWNLAVPTVQRT-LNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRR-KGCIYTY------RGH 141 (845)
Q Consensus 73 LaSgs~--DGtV~VWDl~tg~~v~~-l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t-~~~l~~~------~~h 141 (845)
|+++.. ++.|.+||+.+++.+.. +.. . ....+.+.|++ ..+++.+.||.+.+|+... ++..... ...
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~ 199 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVK 199 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTT
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCC
Confidence 998874 58999999999998888 652 2 23335677766 6778888999999999865 4444221 111
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEEC------------CCCccCCCCCCCCCcceeecCCCCe
Q psy467 142 SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDL------------SLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 142 ~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl------------~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
..+ ..+.+++++..++..+.++.+.+++.-......+..|++ ..... ++++++++.
T Consensus 200 ~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~-----------~a~~~dg~~ 267 (361)
T 2oiz_A 200 DDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNL-----------VGLHRASGR 267 (361)
T ss_dssp TSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSC-----------EEEETTTTE
T ss_pred CCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeE-----------EEEecCCCe
Confidence 222 233446677777767777777773321111111112222 12344 356777665
Q ss_pred EEEEec-CCC--CC--ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEc
Q psy467 210 RKSFTK-GRP--GG--TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSIL 284 (845)
Q Consensus 210 l~~~~~-h~~--~~--~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafS 284 (845)
+..... ... .. ....+.++++.... .+ ..+.... ..+++|+
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---------------------~v------------~~i~~~~-p~~ia~s 313 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---------------------RV------------ARIPGRD-ALSMTID 313 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTTE---------------------EE------------EEEECTT-CCEEEEE
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCCc---------------------EE------------EEEecCC-eeEEEEC
Confidence 554432 100 00 00112221111100 00 0011122 6677888
Q ss_pred CCCCcccceEEEEEeCCCeEEEEECCCC--eEEEEecCCCCCEEEEEEeCCCC
Q psy467 285 PQSPMLCFILTTSSSADRTVNFWDLEKF--SLVSTTEKNSSTIRRLTFSEGGE 335 (845)
Q Consensus 285 Pdg~~~~~~lLatgs~DG~I~IWDl~s~--~~l~tl~gh~~~VtslafSpdG~ 335 (845)
|||+ +|++++. +.|.+||..++ +.+.++..+......++++|+|+
T Consensus 314 pdg~-----~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 314 QQRN-----LMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTT-----EEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCC-----EEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 8887 7777776 99999999999 99999877777889999999986
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.5e-12 Score=156.64 Aligned_cols=269 Identities=10% Similarity=0.003 Sum_probs=172.9
Q ss_pred cCCCCEEEEEeCCC-----eEEEEECCCCeeEEEec------CCCCCeEEEEEcCCCCEEEEE-----ECCCcEEEEECC
Q psy467 25 KKSGQVLATGGDDK-----KVNLWALGKSNCIMSLS------GHSTPVESVQFGNGEETLSAG-----CQSGSIKIWNLA 88 (845)
Q Consensus 25 p~dg~~LaTgs~DG-----~I~IWdl~t~~~i~~l~------~h~~~V~sLafSpdg~~LaSg-----s~DGtV~VWDl~ 88 (845)
| +|++++....++ .|.+.+...++....+. +|...+.+++|||||++||.+ +.+.+|++||+.
T Consensus 77 ~-dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 77 R-RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp E-ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred E-ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 6 778777665433 34444544444333332 355579999999999999843 345689999999
Q ss_pred CCcEEEEEcCCCCCe--EEEEEccCCCEEEEEECCCe-------------EEEEECCCCc----eEEEEcCCCCCeEEEE
Q psy467 89 VPTVQRTLNGHKSSI--TSVDFHPYGDYLCSGSLDSF-------------IKLWDLRRKG----CIYTYRGHSKSINSIR 149 (845)
Q Consensus 89 tg~~v~~l~~h~~~V--~~lafspdg~~Lasgs~DG~-------------I~IWDl~t~~----~l~~~~~h~~~V~sLa 149 (845)
+++.+. ..+...+ ..++|+|||+.|+.++.|.. |++|++.++. ++.....+...+.++.
T Consensus 156 tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 156 SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 987641 1111122 67899999999999988776 9999998776 3333334556788999
Q ss_pred EecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 150 FSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 150 fSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
|+|||++|+.++.++ .|.+ ||..++.. ..+..+...
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~-------------~~~~~~~~---------------------~~l~~~~~~------ 273 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYW-------------KRPGEKDF---------------------RLLVKGVGA------ 273 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEE-------------ECTTCSSC---------------------EEEEECSSC------
T ss_pred ECCCCCEEEEEEeCCCCceEEEE-------------EcCCCCce---------------------EEeecCCCc------
Confidence 999999988877655 3444 65443332 122222211
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe---CCC
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS---ADR 302 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs---~DG 302 (845)
+ ....+ +++. +++.+. .++
T Consensus 274 -~---------------------------~~~~~-~~g~-----------------------------l~~~s~~~~~~~ 295 (695)
T 2bkl_A 274 -K---------------------------YEVHA-WKDR-----------------------------FYVLTDEGAPRQ 295 (695)
T ss_dssp -C---------------------------EEEEE-ETTE-----------------------------EEEEECTTCTTC
T ss_pred -e---------------------------EEEEe-cCCc-----------------------------EEEEECCCCCCC
Confidence 1 22222 3332 344443 358
Q ss_pred eEEEEECCCCeE---EEEecCC-CCCEEEEEEeCCCCEEEEEeCCC-EEEEEec-CCceEEEecCC-CCCeEEEEEc-CC
Q psy467 303 TVNFWDLEKFSL---VSTTEKN-SSTIRRLTFSEGGECLLGGDTEG-LKVYGWE-PARQYDAQPMG-WGKVQDLAVT-GT 374 (845)
Q Consensus 303 ~I~IWDl~s~~~---l~tl~gh-~~~VtslafSpdG~~Lasgs~DG-I~IWDl~-tgk~l~tl~~h-~~~VtsVafS-dg 374 (845)
.|.+||+.++.. ...+..+ ...+..++|+ ++.++++...|+ .+||.++ +++....+..+ .+.|..++++ ++
T Consensus 296 ~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~ 374 (695)
T 2bkl_A 296 RVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDL 374 (695)
T ss_dssp EEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTC
T ss_pred EEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCC
Confidence 899999987652 3333333 4568889998 777888888898 7787776 46666667655 5678888888 77
Q ss_pred ceEEEE---------EEEEeeCCCCCcccc
Q psy467 375 QLWFRR---------VGTWSHQDSGFSTLD 395 (845)
Q Consensus 375 ~lLaaS---------VsiW~~d~~~~~~~~ 395 (845)
+.++.+ +..|..+......+.
T Consensus 375 ~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 375 DDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp SEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred CEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 766644 556655444343343
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-11 Score=145.89 Aligned_cols=303 Identities=13% Similarity=0.098 Sum_probs=205.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC--CCcEEEEEcCCCCCeE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA--VPTVQRTLNGHKSSIT 104 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~--tg~~v~~l~~h~~~V~ 104 (845)
.+.++++...++.|.+||..+++.+.++.. ...+..+.|+|||+++++++.++.|.+||+. +++.+..+.... ...
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCc
Confidence 445666777889999999999999988873 4467899999999999999999999999996 888888887543 467
Q ss_pred EEEEc----cCCCEEEEEE-CCCeEEEEECCCCceEEEEcCC-----------CCCeEEEEEecCCCE-EEEEeCCCcEE
Q psy467 105 SVDFH----PYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGH-----------SKSINSIRFSPDGQW-IASGGEDGVVR 167 (845)
Q Consensus 105 ~lafs----pdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h-----------~~~V~sLafSPdg~~-Lasgs~DG~I~ 167 (845)
.++|+ |||+++++++ .+++|.++|..+.+.+..+... ...+..+..++++.. ++....+|.|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 89999 6999887766 4589999999999988876521 125778888887655 44455668888
Q ss_pred EeeeeccCCceeEEEECCCCccCCC---CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGT---PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~---~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
+ +|....+.+.. ........+.|+++++++......... +.+.+..+.
T Consensus 324 ~-------------vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~-----V~ViD~~t~----------- 374 (567)
T 1qks_A 324 L-------------VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNK-----LVVIDTKEG----------- 374 (567)
T ss_dssp E-------------EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTE-----EEEEETTTT-----------
T ss_pred E-------------EecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCe-----EEEEECCCC-----------
Confidence 8 77765432110 012345578899999987665443332 222111110
Q ss_pred hhhhccCCCceeEEEcCC-CCcCCCCcccccccCceeEE-EcCCCCcccceEEEEEe-CCCeEEEEECCC-------CeE
Q psy467 245 LFATIANPCDYSAIFQPH-RSLNRSGTCVPVSVSRTSLS-ILPQSPMLCFILTTSSS-ADRTVNFWDLEK-------FSL 314 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspd-g~~~~~~~~~~~~~~I~sla-fSPdg~~~~~~lLatgs-~DG~I~IWDl~s-------~~~ 314 (845)
..+...+- +. .++.. ..+. ++|++.. +++++. .++.|.++|..+ ++.
T Consensus 375 ----------kl~~~i~vgg~-------~Phpg--~g~~~~~p~~g~----v~~t~~~g~~~Vsvid~~~~~~~~~~~kv 431 (567)
T 1qks_A 375 ----------KLVAIEDTGGQ-------TPHPG--RGANFVHPTFGP----VWATSHMGDDSVALIGTDPEGHPDNAWKI 431 (567)
T ss_dssp ----------EEEEEEECSSS-------SBCCT--TCEEEEETTTEE----EEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred ----------cEEEEEeccCc-------CCCCc--cceeeECCCCCc----EEEeCCCCCCeEEEecCCCCCCccccCEE
Confidence 00111111 11 11111 1222 4676441 455553 468999999988 788
Q ss_pred EEEecCCCCCEEEEEEeCCCCEEEEEeC-------C-CEEEEEecCC-----c-eEEEec--------CCCCCeEEEEEc
Q psy467 315 VSTTEKNSSTIRRLTFSEGGECLLGGDT-------E-GLKVYGWEPA-----R-QYDAQP--------MGWGKVQDLAVT 372 (845)
Q Consensus 315 l~tl~gh~~~VtslafSpdG~~Lasgs~-------D-GI~IWDl~tg-----k-~l~tl~--------~h~~~VtsVafS 372 (845)
+.++......-..+..+|++++|.+... . .|.++|+.+. . .+..+. .....+..+.|+
T Consensus 432 v~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (567)
T 1qks_A 432 LDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFN 511 (567)
T ss_dssp EEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEEC
T ss_pred EEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeEC
Confidence 8888865444455778999999998762 2 3999999876 2 223332 123578999999
Q ss_pred -CCceEEEEEEEEe
Q psy467 373 -GTQLWFRRVGTWS 385 (845)
Q Consensus 373 -dg~lLaaSVsiW~ 385 (845)
+|+.+.+| +|.
T Consensus 512 ~~G~~~~~s--~~~ 523 (567)
T 1qks_A 512 KDGTEVWFS--VWN 523 (567)
T ss_dssp TTSSEEEEE--EEC
T ss_pred CCCCEEEEE--eec
Confidence 99988755 664
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-12 Score=156.72 Aligned_cols=244 Identities=12% Similarity=-0.006 Sum_probs=161.1
Q ss_pred cCCCcEEEEEEecCCCCEEEEE-----eCCCeEEEEECCCCeeEEEecCCCCCe--EEEEEcCCCCEEEEEECCCc----
Q psy467 13 AHGASVNCLALGKKSGQVLATG-----GDDKKVNLWALGKSNCIMSLSGHSTPV--ESVQFGNGEETLSAGCQSGS---- 81 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTg-----s~DG~I~IWdl~t~~~i~~l~~h~~~V--~sLafSpdg~~LaSgs~DGt---- 81 (845)
+|...+.+++||| +|++||.+ +.+..|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCc
Confidence 4666799999999 99999843 445689999999988641 1122222 67899999999999988776
Q ss_pred ---------EEEEECCCCc----EEEEEcCCCCCeEEEEEccCCCEEEEEECCC----eEEEEECCCCceEEEEcCCCCC
Q psy467 82 ---------IKIWNLAVPT----VQRTLNGHKSSITSVDFHPYGDYLCSGSLDS----FIKLWDLRRKGCIYTYRGHSKS 144 (845)
Q Consensus 82 ---------V~VWDl~tg~----~v~~l~~h~~~V~~lafspdg~~Lasgs~DG----~I~IWDl~t~~~l~~~~~h~~~ 144 (845)
|++|++.++. ++.....+...+..+.|+|||++|+.++.++ .|.+|+..++.. ..+..+...
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~ 273 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGA 273 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCc
Confidence 9999999876 3333344556788999999999998877665 677777655543 344445555
Q ss_pred eEEEEEecCCCEEEEEeC----CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 145 INSIRFSPDGQWIASGGE----DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~----DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
+....+ ++|. ++..+. ++.|.+ ||+.++.... ...+..+...
T Consensus 274 ~~~~~~-~~g~-l~~~s~~~~~~~~l~~-------------~d~~~~~~~~------------------~~~l~~~~~~- 319 (695)
T 2bkl_A 274 KYEVHA-WKDR-FYVLTDEGAPRQRVFE-------------VDPAKPARAS------------------WKEIVPEDSS- 319 (695)
T ss_dssp CEEEEE-ETTE-EEEEECTTCTTCEEEE-------------EBTTBCSGGG------------------CEEEECCCSS-
T ss_pred eEEEEe-cCCc-EEEEECCCCCCCEEEE-------------EeCCCCCccC------------------CeEEecCCCC-
Confidence 666666 5666 444443 456666 8887654200 0111111100
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
..+ ..+.++ ++. ++++...
T Consensus 320 ----~~l---------------------------~~~~~~-~~~-----------------------------lv~~~~~ 338 (695)
T 2bkl_A 320 ----ASL---------------------------LSVSIV-GGH-----------------------------LSLEYLK 338 (695)
T ss_dssp ----CEE---------------------------EEEEEE-TTE-----------------------------EEEEEEE
T ss_pred ----CeE---------------------------EEEEEE-CCE-----------------------------EEEEEEE
Confidence 001 223333 333 8888888
Q ss_pred CCeEEEEECC-CCeEEEEecCC-CCCEEEEEEeCCCCEEEEEeC----CC-EEEEEecCCce
Q psy467 301 DRTVNFWDLE-KFSLVSTTEKN-SSTIRRLTFSEGGECLLGGDT----EG-LKVYGWEPARQ 355 (845)
Q Consensus 301 DG~I~IWDl~-s~~~l~tl~gh-~~~VtslafSpdG~~Lasgs~----DG-I~IWDl~tgk~ 355 (845)
|+..+||.+. +++....+..+ .+.+..++++|+++.|+.... .+ |++||+.+++.
T Consensus 339 dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 339 DATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 9988887654 45566666654 567888999999987764332 23 89999988763
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.6e-11 Score=132.31 Aligned_cols=255 Identities=10% Similarity=-0.013 Sum_probs=176.1
Q ss_pred CCCeEEEEECCCCeeEEEec------CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEc
Q psy467 36 DDKKVNLWALGKSNCIMSLS------GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFH 109 (845)
Q Consensus 36 ~DG~I~IWdl~t~~~i~~l~------~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafs 109 (845)
.++.|.+||.++++....+. ........+++. ++...++...++.|.+||..+++.+.++. .......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 37899999999988765441 123456788885 34455555567999999999999988886 34668899999
Q ss_pred cCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCC-----CCeEEEEEecCCCEEEEEe--CCCcEEEeeeeccCCceeEE
Q psy467 110 PYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHS-----KSINSIRFSPDGQWIASGG--EDGVVRIGASFHLTNTSIHV 181 (845)
Q Consensus 110 pdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~-----~~V~sLafSPdg~~Lasgs--~DG~I~I~~~~~~~~~~I~v 181 (845)
++++ ++++. .++.|.+||..+++....+.... .....+++ ++..++++. .++.|.+
T Consensus 93 ~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~v------------- 156 (328)
T 3dsm_A 93 SDEK-AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILK------------- 156 (328)
T ss_dssp ETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEE-------------
T ss_pred CCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEE-------------
Confidence 9984 55555 88999999999998887776433 14567777 345555554 4788888
Q ss_pred EECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcC
Q psy467 182 VDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQP 261 (845)
Q Consensus 182 WDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fsp 261 (845)
||..+++. +..+...... ..+
T Consensus 157 iD~~t~~~--------------------~~~i~~g~~p-----------------------------------~~i---- 177 (328)
T 3dsm_A 157 IDTETDKV--------------------VDELTIGIQP-----------------------------------TSL---- 177 (328)
T ss_dssp EETTTTEE--------------------EEEEECSSCB-----------------------------------CCC----
T ss_pred EECCCCeE--------------------EEEEEcCCCc-----------------------------------cce----
Confidence 99988776 3332211111 233
Q ss_pred CCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC----------CeEEEEECCCCeEEEEecCC-CCCEEEEEE
Q psy467 262 HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD----------RTVNFWDLEKFSLVSTTEKN-SSTIRRLTF 330 (845)
Q Consensus 262 dg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D----------G~I~IWDl~s~~~l~tl~gh-~~~Vtslaf 330 (845)
+++|+|+ +++++..+ +.|.+||..+++....+... ......++|
T Consensus 178 --------------------~~~~dG~-----l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~ 232 (328)
T 3dsm_A 178 --------------------VMDKYNK-----MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQL 232 (328)
T ss_dssp --------------------EECTTSE-----EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEE
T ss_pred --------------------EEcCCCC-----EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEE
Confidence 4444444 66665544 78999999999888777532 246899999
Q ss_pred eCCCCEEEEEeCCCEEEEEecCCceEE--EecCCCCCeEEEEEc--CCceEEEE---------EEEEeeCCCCCcc
Q psy467 331 SEGGECLLGGDTEGLKVYGWEPARQYD--AQPMGWGKVQDLAVT--GTQLWFRR---------VGTWSHQDSGFST 393 (845)
Q Consensus 331 SpdG~~Lasgs~DGI~IWDl~tgk~l~--tl~~h~~~VtsVafS--dg~lLaaS---------VsiW~~d~~~~~~ 393 (845)
+|+++.|+++.. .|.+||..+++... .+..+.....+++++ +++++++. |.+|..+++.+..
T Consensus 233 ~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~ 307 (328)
T 3dsm_A 233 NGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDE 307 (328)
T ss_dssp CTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEE
T ss_pred ecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEE
Confidence 999999988766 68999998887542 122224678999998 45555542 6677666554433
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-11 Score=133.86 Aligned_cols=251 Identities=10% Similarity=0.017 Sum_probs=170.9
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
.....+++. ++.++++...++.|.+||..+++.+.++. .......+++++++...++...++.|.+||..+++....
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE
Confidence 346778884 45666666678999999999999988886 456789999999885444443789999999999998877
Q ss_pred EcCCC-----CCeEEEEEccCCCEEEEEE--CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC-----
Q psy467 96 LNGHK-----SSITSVDFHPYGDYLCSGS--LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED----- 163 (845)
Q Consensus 96 l~~h~-----~~V~~lafspdg~~Lasgs--~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D----- 163 (845)
+.... .....+++ ++..+++++ .++.|.+||+.+++.+..+... .....++++|+|++++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp EECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred EEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCc
Confidence 76433 14556777 355555555 4889999999999988887643 346789999999876665543
Q ss_pred -----CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 164 -----GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 164 -----G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+.|.+ ||..+++. ...+....
T Consensus 198 ~~~~~~~v~~-------------id~~t~~v--------------------~~~~~~~~--------------------- 223 (328)
T 3dsm_A 198 YGYEAPSLYR-------------IDAETFTV--------------------EKQFKFKL--------------------- 223 (328)
T ss_dssp SCBCCCEEEE-------------EETTTTEE--------------------EEEEECCT---------------------
T ss_pred cccCCceEEE-------------EECCCCeE--------------------EEEEecCC---------------------
Confidence 56777 89877665 32222100
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE-
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST- 317 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t- 317 (845)
+ .....++|+|+++ .|.++.. .|.+||..+++....
T Consensus 224 ------------------------g------------~~p~~la~~~d~~-----~lyv~~~--~v~~~d~~t~~~~~~~ 260 (328)
T 3dsm_A 224 ------------------------G------------DWPSEVQLNGTRD-----TLYWINN--DIWRMPVEADRVPVRP 260 (328)
T ss_dssp ------------------------T------------CCCEEEEECTTSC-----EEEEESS--SEEEEETTCSSCCSSC
T ss_pred ------------------------C------------CCceeEEEecCCC-----EEEEEcc--EEEEEECCCCceeeee
Confidence 0 0123444444444 6666544 899999988775321
Q ss_pred -ecCCCCCEEEEEEeCC-CCEEEEE----eCCC-EEEEEecCCceEEEecCCCCCeEEEEE
Q psy467 318 -TEKNSSTIRRLTFSEG-GECLLGG----DTEG-LKVYGWEPARQYDAQPMGWGKVQDLAV 371 (845)
Q Consensus 318 -l~gh~~~VtslafSpd-G~~Lasg----s~DG-I~IWDl~tgk~l~tl~~h~~~VtsVaf 371 (845)
+..+......++++|+ +.+.++. ..++ |.+||.+ ++.+.++.. ......++|
T Consensus 261 ~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 261 FLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW 319 (328)
T ss_dssp SBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred eecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence 1112356899999995 5444444 3556 9999998 888887753 233455554
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.1e-10 Score=119.40 Aligned_cols=267 Identities=7% Similarity=-0.025 Sum_probs=181.3
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEE-EecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM-SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg 90 (845)
......+.++++.+ +|+++++...++.|.+|+.. ++... .+..+...+.+++++++++..++...++.|..||.. +
T Consensus 16 ~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 16 SIPDSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp SSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCCCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 34567899999999 88888877778999999987 55433 233344679999999999877776667899999988 6
Q ss_pred cEEE-EEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 91 TVQR-TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 91 ~~v~-~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+... .+......+.++++.++++++++...++.|..||.. ++.... +......+.+++++++|+++++...++.|..
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR 171 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEE
Confidence 5432 222234678999999999877777668899999987 554422 2334567899999999996666655677887
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||. +++. .. +.....
T Consensus 172 -------------~~~-~g~~--------------------~~-~~~~~~------------------------------ 186 (300)
T 2qc5_A 172 -------------ITN-TGKL--------------------EE-YPLPTN------------------------------ 186 (300)
T ss_dssp -------------ECT-TCCE--------------------EE-EECSST------------------------------
T ss_pred -------------ECC-CCcE--------------------EE-eeCCCC------------------------------
Confidence 776 3332 11 110000
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE-ecCCCCCEEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST-TEKNSSTIRR 327 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t-l~gh~~~Vts 327 (845)
...+..+++.++|. ++++....+.|.+||. +++.... +..+...+.+
T Consensus 187 --------------------------~~~~~~i~~d~~g~-----l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 234 (300)
T 2qc5_A 187 --------------------------AAAPVGITSGNDGA-----LWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHA 234 (300)
T ss_dssp --------------------------TCCEEEEEECTTSS-----EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred --------------------------CCCcceEEECCCCC-----EEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceE
Confidence 01123344444444 6777666788999998 4544332 3344567899
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCceEE-EecCCCCCeEEEEEc-CCceEEEE
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPARQYD-AQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk~l~-tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
++++++|++.++...++ |..|+. +++... .+......+.+++++ +|++++++
T Consensus 235 i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 235 ITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp EEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEEC
T ss_pred EEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEc
Confidence 99999998666665556 999997 444332 233345678899998 77765543
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.44 E-value=3.8e-11 Score=127.86 Aligned_cols=249 Identities=8% Similarity=0.023 Sum_probs=165.0
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEE-------EeCCCeEEEEECCCCeeEEEec----CCCCCeEEEEEcCC-CCEEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLAT-------GGDDKKVNLWALGKSNCIMSLS----GHSTPVESVQFGNG-EETLSAG 76 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaT-------gs~DG~I~IWdl~t~~~i~~l~----~h~~~V~sLafSpd-g~~LaSg 76 (845)
..+...-....+++|++ ++.++++ +..++.|.+|+..+++...... ++...+.+++++++ ++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~- 88 (314)
T 1pjx_A 11 TKVTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA- 88 (314)
T ss_dssp EEEECCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-
T ss_pred hhhhccCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-
Confidence 34455556788999998 8888887 5678899999987776543222 24567999999999 654444
Q ss_pred ECCCcEEEEECCCCcEEEE-EcC----CCCCeEEEEEccCCCEEEEEECC---------------CeEEEEECCCCceEE
Q psy467 77 CQSGSIKIWNLAVPTVQRT-LNG----HKSSITSVDFHPYGDYLCSGSLD---------------SFIKLWDLRRKGCIY 136 (845)
Q Consensus 77 s~DGtV~VWDl~tg~~v~~-l~~----h~~~V~~lafspdg~~Lasgs~D---------------G~I~IWDl~t~~~l~ 136 (845)
+..+.|.+||.+ ++.... ... ....+.+++++++|+++++...+ +.|..||.. ++...
T Consensus 89 ~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 89 DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 445589999998 765433 221 12347899999999877776654 567777765 55433
Q ss_pred EEcCCCCCeEEEEEe----cCCCEEEEE-eCCCcEEEeeeeccCCceeEEEECC-CCccCCCCCCCCCcceeecCCCCeE
Q psy467 137 TYRGHSKSINSIRFS----PDGQWIASG-GEDGVVRIGASFHLTNTSIHVVDLS-LVHPLGTPPPQYTSSVPFSHNTSLR 210 (845)
Q Consensus 137 ~~~~h~~~V~sLafS----Pdg~~Lasg-s~DG~I~I~~~~~~~~~~I~vWDl~-tg~~l~~~~~~~i~svs~spdg~~l 210 (845)
.. .+......++|+ |+++.++++ ..++.|.+ ||.. ++.... ....
T Consensus 167 ~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~-------------~~~~~~g~~~~---------------~~~~ 217 (314)
T 1pjx_A 167 VD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWS-------------YDIKGPAKIEN---------------KKVW 217 (314)
T ss_dssp EE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEE-------------EEEEETTEEEE---------------EEEE
T ss_pred ec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEE-------------EECCCCCcccc---------------ceEE
Confidence 32 233457889999 999766555 45678888 8765 222100 0000
Q ss_pred EEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcc
Q psy467 211 KSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPML 290 (845)
Q Consensus 211 ~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~ 290 (845)
..+..+. ......++++++|+
T Consensus 218 ~~~~~~~---------------------------------------------------------~~~p~~i~~d~~G~-- 238 (314)
T 1pjx_A 218 GHIPGTH---------------------------------------------------------EGGADGMDFDEDNN-- 238 (314)
T ss_dssp EECCCCS---------------------------------------------------------SCEEEEEEEBTTCC--
T ss_pred EECCCCC---------------------------------------------------------CCCCCceEECCCCC--
Confidence 0000000 01123455555555
Q ss_pred cceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC-C-EEEEEecC
Q psy467 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-G-LKVYGWEP 352 (845)
Q Consensus 291 ~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D-G-I~IWDl~t 352 (845)
++++...++.|.+||..+++.+..+..+...+.+++|+++|+.|++++.+ + |..|++..
T Consensus 239 ---l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 239 ---LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ---EEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ---EEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 77777788999999998777666666666789999999999977666554 5 88888765
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.43 E-value=4.1e-10 Score=125.63 Aligned_cols=248 Identities=10% Similarity=-0.019 Sum_probs=167.6
Q ss_pred EEEEecCCCCEEEEEe----------CCCeEEEEECCCCeeEEEecCC-------CCCeEEEEEcCCCCEEEEEEC--CC
Q psy467 20 CLALGKKSGQVLATGG----------DDKKVNLWALGKSNCIMSLSGH-------STPVESVQFGNGEETLSAGCQ--SG 80 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs----------~DG~I~IWdl~t~~~i~~l~~h-------~~~V~sLafSpdg~~LaSgs~--DG 80 (845)
.++++| +|++++++. .++.|.+||..+.+.+.++.-. ......++|+|||++|++++. ++
T Consensus 70 ~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~ 148 (373)
T 2mad_H 70 NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC
Confidence 899999 899888886 3678999999988887766422 123568999999999998874 57
Q ss_pred cEEEEECCCCcEEEE-EcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEc-----CCCCC-eEEEEEec
Q psy467 81 SIKIWNLAVPTVQRT-LNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYR-----GHSKS-INSIRFSP 152 (845)
Q Consensus 81 tV~VWDl~tg~~v~~-l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~-----~h~~~-V~sLafSP 152 (845)
.|.++| .+++.+.. +... . |+.+.|++ +.+++.+.||.+.++|. +++...... ....+ .....+.+
T Consensus 149 ~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred eEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 899999 99998888 6532 2 24555665 45667778999999999 877663322 11112 12345666
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++..++..+.++.+.+ .|+...... .+..+...... .
T Consensus 223 ~~~~~~~~~~~~~v~v-------------id~~~~~~~------------------v~~~~~~~~~~-------~----- 259 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQ-------------ADISAAGAT------------------NKAPIDALSGG-------R----- 259 (373)
T ss_pred cCCEEEEEcCCceEEE-------------EeccCCcce------------------EeeeeeecCCc-------c-----
Confidence 6655554456777777 887654320 01111100000 0
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC----------CC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA----------DR 302 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~----------DG 302 (845)
....|.|.+. ..++++||++ .+.++.. .+
T Consensus 260 ----------------------~~~~~~p~g~--------------~~~~~s~d~~-----~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 260 ----------------------KADTWRPGGW--------------QQVAYLKSSD-----GIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred ----------------------cccceecCce--------------EeEEECCCCC-----EEEEEeccCCcccccCCCC
Confidence 1223344432 3456677766 4444332 35
Q ss_pred eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCC-EEEEEe-CCC-EEEEEecCCceEEEe
Q psy467 303 TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE-CLLGGD-TEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 303 ~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~-~Lasgs-~DG-I~IWDl~tgk~l~tl 359 (845)
.|.++|+.+++.+.++.. .....+++|+|||+ .++++. .++ |.+||..+++.+..+
T Consensus 299 ~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 299 EVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred eEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 899999999999998864 34689999999999 777776 366 999999999998874
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.9e-11 Score=129.20 Aligned_cols=216 Identities=14% Similarity=0.052 Sum_probs=162.3
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEcCCC-CCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC-CCeE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK-SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-KSIN 146 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~-~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~-~~V~ 146 (845)
.++.|++++.++.|.+||.++|+.+.++..+. ..+.++.++|+|++++ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 46789999999999999999999999998765 4789999999999888 45788999999 899999998653 4788
Q ss_pred EEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 147 SIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 147 sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
++.+.++|+++++.+. ++.+.. +|. +++. +..+......
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~-------------vd~-~Gk~--------------------l~~~~~~~~~------ 120 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILE-------------VNM-KGEV--------------------LSKTEFETGI------ 120 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEE-------------ECT-TSCE--------------------EEEEEECCSC------
T ss_pred ccEECCCCCEEEEecCCCCEEEE-------------EeC-CCCE--------------------EEEEeccCCC------
Confidence 9999999999998877 666665 553 3443 4333211000
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
. ........+++.++|+ ++++...++.|.
T Consensus 121 --------------------------------------~--------~~~~~~~~v~~~~~G~-----~lv~~~~~~~v~ 149 (276)
T 3no2_A 121 --------------------------------------E--------RPHAQFRQINKNKKGN-----YLVPLFATSEVR 149 (276)
T ss_dssp --------------------------------------S--------SGGGSCSCCEECTTSC-----EEEEETTTTEEE
T ss_pred --------------------------------------C--------cccccccCceECCCCC-----EEEEecCCCEEE
Confidence 0 0001122334455555 899999999999
Q ss_pred EEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCC------CCeEEEEEc-CCceE
Q psy467 306 FWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGW------GKVQDLAVT-GTQLW 377 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~------~~VtsVafS-dg~lL 377 (845)
.||.. ++.+.++..+ ..+.++.+.++|..+++++.++ |..+|.++|+.+..+..+. ..+..++.. +|.++
T Consensus 150 ~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~ 227 (276)
T 3no2_A 150 EIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY 227 (276)
T ss_dssp EECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEE
T ss_pred EECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEE
Confidence 99998 9999998864 4566788899999999998888 9999999999987775432 236777777 77776
Q ss_pred EEE
Q psy467 378 FRR 380 (845)
Q Consensus 378 aaS 380 (845)
+++
T Consensus 228 v~~ 230 (276)
T 3no2_A 228 ICN 230 (276)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.41 E-value=4.6e-11 Score=124.50 Aligned_cols=230 Identities=7% Similarity=-0.028 Sum_probs=152.0
Q ss_pred CeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE
Q psy467 60 PVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 60 ~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~ 138 (845)
...+++++++++.++ +.+.++.|.+||..++........+...+.+++++++++.+++.. ++.|.+||...... ..+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eee
Confidence 788999999998776 446788999999876543322223335678999999998555554 88999999875543 333
Q ss_pred c-CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC
Q psy467 139 R-GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 139 ~-~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~ 217 (845)
. .....+.+++++++|+++++...++.|.+ |+..+... .......
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~-------------~~~~~~~~--------------------~~~~~~~- 148 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVK-------------LAAGSKTQ--------------------TVLPFTG- 148 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEE-------------ECTTCCSC--------------------EECCCCS-
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEE-------------EECCCcee--------------------Eeecccc-
Confidence 2 23357899999999997777767788888 76443222 1000000
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS 297 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat 297 (845)
...+..++++++|+ ++++
T Consensus 149 ---------------------------------------------------------~~~p~~i~~~~~g~-----l~v~ 166 (270)
T 1rwi_B 149 ---------------------------------------------------------LNDPDGVAVDNSGN-----VYVT 166 (270)
T ss_dssp ---------------------------------------------------------CCSCCCEEECTTCC-----EEEE
T ss_pred ---------------------------------------------------------CCCceeEEEeCCCC-----EEEE
Confidence 01123344444444 7777
Q ss_pred EeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCc
Q psy467 298 SSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQ 375 (845)
Q Consensus 298 gs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~ 375 (845)
...++.|.+||............+...+.+++++++|.+.++...++ |.+|+............+...+.+++++ +|+
T Consensus 167 ~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 246 (270)
T 1rwi_B 167 DTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT 246 (270)
T ss_dssp EGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC
T ss_pred ECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC
Confidence 77788999999987765544334446789999999997777666666 9999987654433222344679999999 888
Q ss_pred eEEEE-----EEEEeeC
Q psy467 376 LWFRR-----VGTWSHQ 387 (845)
Q Consensus 376 lLaaS-----VsiW~~d 387 (845)
++++. |.++..+
T Consensus 247 l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 247 VYVADRGNDRVVKLTSL 263 (270)
T ss_dssp EEEEEGGGTEEEEECCC
T ss_pred EEEEECCCCEEEEEcCC
Confidence 66665 6666543
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=7.2e-10 Score=116.47 Aligned_cols=240 Identities=9% Similarity=0.009 Sum_probs=163.3
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee-EEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC-IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~-i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
.+...+.++++++ +|.++++...++.|..|+.. ++. ...+......+.++++++++..+++...++.|.+||. +++
T Consensus 54 ~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 54 TPDAKVMCLTISS-DGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp STTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred cccCceeeEEECC-CCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 3457899999998 88888877778899999976 332 2222235567999999999988887767889999999 555
Q ss_pred EEEE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe
Q psy467 92 VQRT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169 (845)
Q Consensus 92 ~v~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~ 169 (845)
.... .......+.++++.++|+.+++...++.|..||. +++.... .......+.+++++++|+++++...++.|..
T Consensus 131 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~- 208 (299)
T 2z2n_A 131 IREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGR- 208 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE-
T ss_pred EEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEE-
Confidence 4433 2334567899999999987777767789999998 6665433 2334456889999999987766666778888
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
||. ++.. . .+.....
T Consensus 209 ------------~~~-~g~~--------------------~-~~~~~~~------------------------------- 223 (299)
T 2z2n_A 209 ------------ITT-SGEI--------------------T-EFKIPTP------------------------------- 223 (299)
T ss_dssp ------------ECT-TCCE--------------------E-EEECSST-------------------------------
T ss_pred ------------ECC-CCcE--------------------E-EEECCCC-------------------------------
Confidence 887 4433 1 1100000
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE-ecCCCCCEEEE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST-TEKNSSTIRRL 328 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t-l~gh~~~Vtsl 328 (845)
...+.+++++++|+ ++++...++.|..||. +++.... +..+...+.++
T Consensus 224 -------------------------~~~~~~i~~~~~g~-----l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i 272 (299)
T 2z2n_A 224 -------------------------NARPHAITAGAGID-----LWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGI 272 (299)
T ss_dssp -------------------------TCCEEEEEECSTTC-----EEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEE
T ss_pred -------------------------CCCceeEEECCCCC-----EEEeccCCceEEEECC-CCceEEEeCCCCCCccceE
Confidence 01223444444444 6777667889999998 4543322 33445679999
Q ss_pred EEeCCCCEEEEEeCCCEEEEEecCCc
Q psy467 329 TFSEGGECLLGGDTEGLKVYGWEPAR 354 (845)
Q Consensus 329 afSpdG~~Lasgs~DGI~IWDl~tgk 354 (845)
++ ++|.+.++...++|..++.++++
T Consensus 273 ~~-~~g~l~v~~~~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 273 CF-DGETIWFAMECDKIGKLTLIKDN 297 (299)
T ss_dssp EE-CSSCEEEEETTTEEEEEEEC---
T ss_pred Ee-cCCCEEEEecCCcEEEEEcCccc
Confidence 99 88887777665557778876643
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.6e-11 Score=144.79 Aligned_cols=255 Identities=12% Similarity=0.126 Sum_probs=162.1
Q ss_pred cCCCCEEEEEeCCC---eEEEEE--CC---CCeeEEEe------cCCCCCeEEEEEcCCCCEEEEEECC-----CcEEEE
Q psy467 25 KKSGQVLATGGDDK---KVNLWA--LG---KSNCIMSL------SGHSTPVESVQFGNGEETLSAGCQS-----GSIKIW 85 (845)
Q Consensus 25 p~dg~~LaTgs~DG---~I~IWd--l~---t~~~i~~l------~~h~~~V~sLafSpdg~~LaSgs~D-----GtV~VW 85 (845)
| +|++++....++ .-.+|. .. .++....+ .+|...+..++|||||++||.++.+ ..|++|
T Consensus 116 p-dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 116 R-RGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp E-ETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred E-ECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 6 788877665433 244554 33 33332222 2233468899999999999887653 469999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCe--------------EEEEECCCCce--EEEEc--CCCCCeEE
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF--------------IKLWDLRRKGC--IYTYR--GHSKSINS 147 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~--------------I~IWDl~t~~~--l~~~~--~h~~~V~s 147 (845)
|+.+++.+.... +...+..++|+|| +.|+.++.++. |++|++.++.. ...+. .+...+..
T Consensus 195 dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 999998765321 2222357899999 99988876654 89999977652 22232 23345889
Q ss_pred EEEecCCCEEEEEeCCC-----cEEEeeeeccCCceeEEEECCCC--ccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 148 IRFSPDGQWIASGGEDG-----VVRIGASFHLTNTSIHVVDLSLV--HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG-----~I~I~~~~~~~~~~I~vWDl~tg--~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
+.|+|||++|+..+.++ .|++ ||+.++ .. ...+..+...
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~-------------~d~~~~~~~~--------------------~~~l~~~~~~- 318 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHV-------------ARVTNGKIGP--------------------VTALIPDLKA- 318 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEE-------------EEEETTEECC--------------------CEEEECSSSS-
T ss_pred EEECCCCCEEEEEEEccCCCcceEEE-------------EECCCCCCcc--------------------cEEecCCCCc-
Confidence 99999999988877544 5555 888765 31 1112222111
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
. ... +++++. .|+..+.
T Consensus 319 ------~---------------------------~~~-~~~dg~-----------------------------~l~~~s~ 335 (741)
T 1yr2_A 319 ------Q---------------------------WDF-VDGVGD-----------------------------QLWFVSG 335 (741)
T ss_dssp ------C---------------------------EEE-EEEETT-----------------------------EEEEEEC
T ss_pred ------e---------------------------EEE-EeccCC-----------------------------EEEEEEC
Confidence 1 111 224544 5555554
Q ss_pred ----CCeEEEEECCCC--eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec-CCceEEEecC-CCCCeEEEEE
Q psy467 301 ----DRTVNFWDLEKF--SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE-PARQYDAQPM-GWGKVQDLAV 371 (845)
Q Consensus 301 ----DG~I~IWDl~s~--~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~-tgk~l~tl~~-h~~~VtsVaf 371 (845)
++.|.+||+.++ .....+..+...+..++|+ ++.++++...|+ .+||.++ +++....+.. +.+.|..+++
T Consensus 336 ~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~ 414 (741)
T 1yr2_A 336 DGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSG 414 (741)
T ss_dssp TTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEEC
T ss_pred CCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeec
Confidence 456999999874 4444455555567778888 667788888888 7777665 4666666665 3677889999
Q ss_pred c-CCceEEEE
Q psy467 372 T-GTQLWFRR 380 (845)
Q Consensus 372 S-dg~lLaaS 380 (845)
+ +++.++.+
T Consensus 415 s~d~~~l~~~ 424 (741)
T 1yr2_A 415 RPGDRHAYLS 424 (741)
T ss_dssp CBTCSCEEEE
T ss_pred CCCCCEEEEE
Confidence 9 77766544
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-10 Score=127.46 Aligned_cols=299 Identities=11% Similarity=0.036 Sum_probs=185.0
Q ss_pred EEEecCCCCEEEEEeC-----CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE----------CCCcEEEE
Q psy467 21 LALGKKSGQVLATGGD-----DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC----------QSGSIKIW 85 (845)
Q Consensus 21 LafSp~dg~~LaTgs~-----DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs----------~DGtV~VW 85 (845)
....| +++.+++... ++.|.++|..+++.+.++.....+ . ++++|||+++++++ .++.|.+|
T Consensus 38 ~~~~p-d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAP-DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCC-CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCC-CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 34456 7888887765 679999999999999988765555 4 99999999887775 36789999
Q ss_pred ECCCCcEEEEEcCCC-------CCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCE
Q psy467 86 NLAVPTVQRTLNGHK-------SSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~-------~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
|..+++.+..+.... ..-..++|+|||++++++.. ++.|.++|+.+++.+.++... + . ...+....+.
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~ 191 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDT 191 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E-EEEEEEETTE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-C-c-ceeecCCCce
Confidence 999999988875321 24567999999999988874 689999999999999888532 2 1 2233334556
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCC-CccCC----CCC--CCCCc-ceee-cCCCCeEEEEecCCCCCccceeeE
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSL-VHPLG----TPP--PQYTS-SVPF-SHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~----~~~--~~~i~-svs~-spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
+++.+.||.+.+ .++.+ ++... .+. ...+. ...| .++|+++.. .. .. .+.+
T Consensus 192 ~~~~~~DG~~~~-------------v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~v-s~-~g-----~V~v 251 (386)
T 3sjl_D 192 FFMHCRDGSLAK-------------VAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWP-TY-TG-----KIHQ 251 (386)
T ss_dssp EEEEETTSCEEE-------------EECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEE-BT-TS-----EEEE
T ss_pred eEEECCCCCEEE-------------EECCCCCeEEEeecceeccccccccccceeEcCCCcEEEE-eC-CC-----EEEE
Confidence 777788888877 56554 33210 000 01111 1233 245543321 11 11 1111
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC-------
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA------- 300 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~------- 300 (845)
.+...... .......++... .....|.|. ....++++++++ .+.....
T Consensus 252 ~d~~~~~~--~v~~~~~~~~~~----~~~~g~~p~--------------g~q~~a~~~~~~-----~lyV~~~~~~~~~h 306 (386)
T 3sjl_D 252 IDLSSGDA--KFLPAVEALTEA----ERADGWRPG--------------GWQQVAYHRALD-----RIYLLVDQRDEWRH 306 (386)
T ss_dssp EECTTSSC--EECCCEESSCHH----HHHTTEEEC--------------SSSCEEEETTTT-----EEEEEEEECCTTCT
T ss_pred EECCCCcc--eeecceeccccc----cccccccCC--------------CcceeeECCCCC-----eEEEEecccccccc
Confidence 11100000 000000000000 000002222 224567777777 3433321
Q ss_pred ---CCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCC-EEEEEeC-CC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 301 ---DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE-CLLGGDT-EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 301 ---DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~-~Lasgs~-DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
.+.|.++|+.+++.+.++.. ...+..+++++|++ .|+++.. ++ |.++|..+++.+.++... +....+.++
T Consensus 307 k~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s 382 (386)
T 3sjl_D 307 KTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITT 382 (386)
T ss_dssp TSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEEC
Confidence 25799999999999998874 23688999999997 7777654 66 999999999999888643 333444444
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3e-10 Score=133.62 Aligned_cols=297 Identities=11% Similarity=0.076 Sum_probs=191.5
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECC--CCeeEEEecCCCCCeEEEEEc----CCCCEEEEEEC-CCcEEEEEC
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALG--KSNCIMSLSGHSTPVESVQFG----NGEETLSAGCQ-SGSIKIWNL 87 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~--t~~~i~~l~~h~~~V~sLafS----pdg~~LaSgs~-DGtV~VWDl 87 (845)
...+.+++|+| +|+++++++.|+.|.+||+. +++.+.++... .....++|+ |||+++++++. +++|.++|.
T Consensus 196 g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 196 GYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp SSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 34577999999 99999999999999999995 78888887743 346899999 69999887765 699999999
Q ss_pred CCCcEEEEEcCC-----------CCCeEEEEEccCCCEE-EEEECCCeEEEEECCCCceE--EEEcCCCCCeEEEEEecC
Q psy467 88 AVPTVQRTLNGH-----------KSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRRKGCI--YTYRGHSKSINSIRFSPD 153 (845)
Q Consensus 88 ~tg~~v~~l~~h-----------~~~V~~lafspdg~~L-asgs~DG~I~IWDl~t~~~l--~~~~~h~~~V~sLafSPd 153 (845)
.+.+.+..+... ...+..+..++++..+ +....+|.|.++|..+.+.+ ..+. ......++.|+|+
T Consensus 274 ~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pd 352 (567)
T 1qks_A 274 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGS 352 (567)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTT
T ss_pred CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCC
Confidence 999998877532 2257788889887655 44556799999999765432 2222 3446778999999
Q ss_pred CCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCC-----CCCccee-ecCCCCeEEEEecCCCCCccceee
Q psy467 154 GQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP-----QYTSSVP-FSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 154 g~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~-----~~i~svs-~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
|++++++. .++.|.+ +|+.+++....... ...+... ++|++..+.. ..+... ..+.
T Consensus 353 gr~~~va~~~sn~V~V-------------iD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~-t~~~g~---~~Vs 415 (567)
T 1qks_A 353 HRYFITAANARNKLVV-------------IDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWA-TSHMGD---DSVA 415 (567)
T ss_dssp SCEEEEEEGGGTEEEE-------------EETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEE-EEBSSS---SEEE
T ss_pred CCEEEEEeCCCCeEEE-------------EECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEE-eCCCCC---CeEE
Confidence 99987765 5678888 99988876322211 1112222 3565443332 122111 0111
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccc-cCceeEEEcCCCCcccceEEEEEeC-----
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVS-VSRTSLSILPQSPMLCFILTTSSSA----- 300 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~-~~I~slafSPdg~~~~~~lLatgs~----- 300 (845)
+.+... .... +..|... ..+... ..-..+..+|+++ ++.+...
T Consensus 416 vid~~~--~~~~-----------------------~~~~kvv-~~i~~~g~g~~~i~~~p~~~-----~l~v~~~~~~~~ 464 (567)
T 1qks_A 416 LIGTDP--EGHP-----------------------DNAWKIL-DSFPALGGGSLFIKTHPNSQ-----YLYVDATLNPEA 464 (567)
T ss_dssp EEECCT--TTCT-----------------------TTBTSEE-EEEECSCSCCCCEECCTTCS-----EEEEECTTCSSH
T ss_pred EecCCC--CCCc-----------------------cccCEEE-EEEecCCCCCEEEEeCCCCC-----eEEEecCCCCCc
Confidence 211110 0000 0000000 000000 1113466788887 5665442
Q ss_pred --CCeEEEEECCCC-----e-EEEEec--------CCCCCEEEEEEeCCCCEEEEEeC-----CC-EEEEEecCCceEEE
Q psy467 301 --DRTVNFWDLEKF-----S-LVSTTE--------KNSSTIRRLTFSEGGECLLGGDT-----EG-LKVYGWEPARQYDA 358 (845)
Q Consensus 301 --DG~I~IWDl~s~-----~-~l~tl~--------gh~~~VtslafSpdG~~Lasgs~-----DG-I~IWDl~tgk~l~t 358 (845)
.+.|.+||+.+. . ....+. .....+..+.|+++|+++.++.. ++ |.|+|..+++.+.+
T Consensus 465 ~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 544 (567)
T 1qks_A 465 EISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHV 544 (567)
T ss_dssp HHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred ccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEE
Confidence 358999999876 2 222332 12457899999999999887632 46 99999999999888
Q ss_pred ecCC
Q psy467 359 QPMG 362 (845)
Q Consensus 359 l~~h 362 (845)
++..
T Consensus 545 i~~~ 548 (567)
T 1qks_A 545 IKDE 548 (567)
T ss_dssp ECCT
T ss_pred eCCC
Confidence 8753
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-11 Score=149.04 Aligned_cols=241 Identities=12% Similarity=0.076 Sum_probs=157.6
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCC-----CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCc-------
Q psy467 14 HGASVNCLALGKKSGQVLATGGDD-----KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGS------- 81 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~D-----G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGt------- 81 (845)
|...+.+++||| +|++||.+..+ ..|++||+.+++.+.... +...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCEEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 334788999999 99999887643 469999999988765321 2222357899999 99988877654
Q ss_pred -------EEEEECCCCcE--EEEEc--CCCCCeEEEEEccCCCEEEEEECCC-----eEEEEECCCC--ceEEEEcCCCC
Q psy467 82 -------IKIWNLAVPTV--QRTLN--GHKSSITSVDFHPYGDYLCSGSLDS-----FIKLWDLRRK--GCIYTYRGHSK 143 (845)
Q Consensus 82 -------V~VWDl~tg~~--v~~l~--~h~~~V~~lafspdg~~Lasgs~DG-----~I~IWDl~t~--~~l~~~~~h~~ 143 (845)
|.+|++.++.. ...+. .+...+..+.|+|||++|+..+.++ .|++||+.++ .+...+..+..
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 89999987652 22333 3334588999999999998877544 8999999876 31445554554
Q ss_pred CeEEEEEecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEECCCCc-cCCCCCCCCCcceeecCCCCeEEEEecCCC
Q psy467 144 SINSIRFSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVDLSLVH-PLGTPPPQYTSSVPFSHNTSLRKSFTKGRP 218 (845)
Q Consensus 144 ~V~sLafSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWDl~tg~-~l~~~~~~~i~svs~spdg~~l~~~~~h~~ 218 (845)
.+... ++|+|+.|+..+.++ .|.+ ||+.++. . ...+..+..
T Consensus 318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~-------------~d~~~~~~~--------------------~~~l~~~~~ 363 (741)
T 1yr2_A 318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVR-------------VDLSGSTPR--------------------FDTVVPESK 363 (741)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEE-------------EECSSSSCE--------------------EEEEECCCS
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEE-------------EeCCCCccc--------------------cEEEecCCC
Confidence 45544 358899888777643 3555 8876531 1 111111111
Q ss_pred CCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE
Q psy467 219 GGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS 298 (845)
Q Consensus 219 ~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg 298 (845)
. .+ ..+.++ ++. ++++.
T Consensus 364 ~------~l---------------------------~~~~~~-~~~-----------------------------lv~~~ 380 (741)
T 1yr2_A 364 D------NL---------------------------ESVGIA-GNR-----------------------------LFASY 380 (741)
T ss_dssp S------EE---------------------------EEEEEE-BTE-----------------------------EEEEE
T ss_pred C------eE---------------------------EEEEEE-CCE-----------------------------EEEEE
Confidence 1 01 223333 223 78888
Q ss_pred eCCCeEEEEECC-CCeEEEEecC-CCCCEEEEEEeCCCCEEEEE-eC---CC-EEEEEecCCc
Q psy467 299 SADRTVNFWDLE-KFSLVSTTEK-NSSTIRRLTFSEGGECLLGG-DT---EG-LKVYGWEPAR 354 (845)
Q Consensus 299 s~DG~I~IWDl~-s~~~l~tl~g-h~~~VtslafSpdG~~Lasg-s~---DG-I~IWDl~tgk 354 (845)
..|+..+||.+. ++.....+.. +.+.+..+.++|+++.|+.. +. .+ |++||+.+++
T Consensus 381 ~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 381 IHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 889887776543 4556666664 35678999999998866533 22 23 8889988876
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.35 E-value=4.9e-10 Score=120.01 Aligned_cols=236 Identities=13% Similarity=0.032 Sum_probs=155.3
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
..+..--.+..|+++++.++++...++.|..||..++.. ..+. ....+.+++++++|+++++. ++.|.+||.++++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQS 84 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCc
Confidence 344456678999996667777777889999999987765 3333 45689999999999955543 6789999998876
Q ss_pred EEEEEcC----CCCCeEEEEEccCCCEEEEEECC---------CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 92 VQRTLNG----HKSSITSVDFHPYGDYLCSGSLD---------SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 92 ~v~~l~~----h~~~V~~lafspdg~~Lasgs~D---------G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
....... ....+.+++++|+|+++++...+ ..-.+|.+.....+..+.........++|+||++.|+
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEE
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEE
Confidence 5433321 12347889999999966654321 2334555543222222333334568899999998775
Q ss_pred EE-eCCCcEEEeeeeccCCceeEEEECC--CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 159 SG-GEDGVVRIGASFHLTNTSIHVVDLS--LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 159 sg-s~DG~I~I~~~~~~~~~~I~vWDl~--tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
.+ +.++.|.. ||+. ++... +.+.+..+..+
T Consensus 165 v~~~~~~~i~~-------------~~~d~~~G~~~---------------~~~~~~~~~~~------------------- 197 (297)
T 3g4e_A 165 YIDSLSYSVDA-------------FDYDLQTGQIS---------------NRRSVYKLEKE------------------- 197 (297)
T ss_dssp EEEGGGTEEEE-------------EEECTTTCCEE---------------EEEEEEECCGG-------------------
T ss_pred EecCCCCcEEE-------------EeccCCCCccc---------------CcEEEEECCCC-------------------
Confidence 54 45677888 8763 33320 00000000000
Q ss_pred ccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l 315 (845)
......+++.++|+ +.++....+.|..||..+++.+
T Consensus 198 ---------------------------------------~~~p~g~~~d~~G~-----lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 198 ---------------------------------------EQIPDGMCIDAEGK-----LWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp ---------------------------------------GCEEEEEEEBTTSC-----EEEEEETTTEEEEECTTTCCEE
T ss_pred ---------------------------------------CCCCCeeEECCCCC-----EEEEEcCCCEEEEEcCCCceEE
Confidence 01123445555554 7777777889999999999999
Q ss_pred EEecCCCCCEEEEEEe-CCCCEEEEEeC
Q psy467 316 STTEKNSSTIRRLTFS-EGGECLLGGDT 342 (845)
Q Consensus 316 ~tl~gh~~~VtslafS-pdG~~Lasgs~ 342 (845)
..+..+...+++++|. |+++.|++++.
T Consensus 234 ~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 234 QTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 9988777789999999 89887776654
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.35 E-value=5.7e-10 Score=118.74 Aligned_cols=227 Identities=11% Similarity=0.076 Sum_probs=149.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEE-------EECCCcEEEEECCCCcEEEEEc----CCCCCeEEEEEccC-CCEEEEEECCC
Q psy467 55 SGHSTPVESVQFGNGEETLSA-------GCQSGSIKIWNLAVPTVQRTLN----GHKSSITSVDFHPY-GDYLCSGSLDS 122 (845)
Q Consensus 55 ~~h~~~V~sLafSpdg~~LaS-------gs~DGtV~VWDl~tg~~v~~l~----~h~~~V~~lafspd-g~~Lasgs~DG 122 (845)
...-....+++|++++..+++ +..++.|.+||..+++...... ++...+.+++++++ ++ +++++..+
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCC
Confidence 334456789999999988877 5678999999998887543322 24467899999999 65 44445455
Q ss_pred eEEEEECCCCceEEE-EcC----CCCCeEEEEEecCCCEEEEEeCC---------------CcEEEeeeeccCCceeEEE
Q psy467 123 FIKLWDLRRKGCIYT-YRG----HSKSINSIRFSPDGQWIASGGED---------------GVVRIGASFHLTNTSIHVV 182 (845)
Q Consensus 123 ~I~IWDl~t~~~l~~-~~~----h~~~V~sLafSPdg~~Lasgs~D---------------G~I~I~~~~~~~~~~I~vW 182 (845)
.|.+||.. ++.... ... ....+.+++++++|+++++...+ +.|.. |
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~-------------~ 158 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC-------------F 158 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE-------------E
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE-------------E
Confidence 79999988 665433 221 12357899999999877766544 22332 4
Q ss_pred ECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCC
Q psy467 183 DLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPH 262 (845)
Q Consensus 183 Dl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspd 262 (845)
|.. ++. ......
T Consensus 159 ~~~-g~~--------------------~~~~~~----------------------------------------------- 170 (314)
T 1pjx_A 159 TTD-GQM--------------------IQVDTA----------------------------------------------- 170 (314)
T ss_dssp CTT-SCE--------------------EEEEEE-----------------------------------------------
T ss_pred CCC-CCE--------------------EEeccC-----------------------------------------------
Confidence 332 211 110000
Q ss_pred CCcCCCCcccccccCceeEEEc----CCCCcccceEEEEEeCCCeEEEEECC-CCe-----EEEEecCCC-CCEEEEEEe
Q psy467 263 RSLNRSGTCVPVSVSRTSLSIL----PQSPMLCFILTTSSSADRTVNFWDLE-KFS-----LVSTTEKNS-STIRRLTFS 331 (845)
Q Consensus 263 g~~~~~~~~~~~~~~I~slafS----Pdg~~~~~~lLatgs~DG~I~IWDl~-s~~-----~l~tl~gh~-~~VtslafS 331 (845)
......++|+ |+++. ++++...++.|.+||.. +++ ....+..+. ..+..++++
T Consensus 171 ------------~~~~~~i~~~~~~d~dg~~----l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d 234 (314)
T 1pjx_A 171 ------------FQFPNGIAVRHMNDGRPYQ----LIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD 234 (314)
T ss_dssp ------------ESSEEEEEEEECTTSCEEE----EEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB
T ss_pred ------------CCCcceEEEecccCCCCCE----EEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC
Confidence 0112344455 55531 44555567899999976 454 233344443 568899999
Q ss_pred CCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 332 EGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 332 pdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
++|++.++...++ |.+||.++++.+..+..+...+.+++|+ +++.|.++
T Consensus 235 ~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~ 285 (314)
T 1pjx_A 235 EDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVT 285 (314)
T ss_dssp TTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEE
Confidence 9999888877777 9999998788777777777889999999 88845444
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.34 E-value=3.9e-09 Score=117.64 Aligned_cols=264 Identities=6% Similarity=-0.027 Sum_probs=173.9
Q ss_pred EecCCCCEEEEEeC--CC---eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE----------CCCcEEEEEC
Q psy467 23 LGKKSGQVLATGGD--DK---KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC----------QSGSIKIWNL 87 (845)
Q Consensus 23 fSp~dg~~LaTgs~--DG---~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs----------~DGtV~VWDl 87 (845)
..| +++++++... .. .|.+||..+++.+.++.....+ .++++|||++|+++. .++.|.+||.
T Consensus 28 ~~~-~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 28 PGA-DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred CCC-CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 345 7777777653 22 8899999999998888754444 999999999999886 3678999999
Q ss_pred CCCcEEEEEcCC-------CCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCC-CE
Q psy467 88 AVPTVQRTLNGH-------KSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDG-QW 156 (845)
Q Consensus 88 ~tg~~v~~l~~h-------~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg-~~ 156 (845)
.+.+.+..+... ...-..++|+|||++|+++.. ++.|.++| .+++.+.. +.. .. |+.+.|++ +.
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~ 179 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPST 179 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCce
Confidence 999888877532 123457899999999998874 47899999 99988877 542 22 24555655 45
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+++.+.||.+.+ +|. +++. ...... .. +. .
T Consensus 180 ~~~~~~dg~~~~-------------vd~-~g~~--------------------~~~~~~--~~-------~~-~------ 209 (373)
T 2mad_H 180 FYLLCAQGGLAK-------------TDH-AGGA--------------------AGAGLV--GA-------ML-T------ 209 (373)
T ss_pred EEEEcCCCCEEE-------------EEC-CCcE--------------------EEEEec--cc-------cc-c------
Confidence 667778899888 888 6665 211000 00 00 0
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe--E
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS--L 314 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~--~ 314 (845)
+ ..+......+.+++. . ++++ +..+.+.+.|+.... .
T Consensus 210 ----~--------~~p~~~~~~~~~~~~-----------------------~-----~~~~-~~~~~v~vid~~~~~~~v 248 (373)
T 2mad_H 210 ----A--------AQNLLTQPAQANKSG-----------------------R-----IVWP-VYSGKILQADISAAGATN 248 (373)
T ss_pred ----C--------CcceeecceeEecCC-----------------------E-----EEEE-cCCceEEEEeccCCcceE
Confidence 0 000001122223222 1 3333 367789999986542 2
Q ss_pred EEEecC----------CCCCEEEEEEeCCCCEEEEEeC----------CC-EEEEEecCCceEEEecCCCCCeEEEEEc-
Q psy467 315 VSTTEK----------NSSTIRRLTFSEGGECLLGGDT----------EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT- 372 (845)
Q Consensus 315 l~tl~g----------h~~~VtslafSpdG~~Lasgs~----------DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS- 372 (845)
+..+.- .......+++++|++.|+++.. .+ |.++|..+++.+.++... ....+++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~ 327 (373)
T 2mad_H 249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQ 327 (373)
T ss_pred eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECC
Confidence 233221 1123445789999998887653 24 999999999998888643 368999999
Q ss_pred CCc-eEEEE------EEEEee
Q psy467 373 GTQ-LWFRR------VGTWSH 386 (845)
Q Consensus 373 dg~-lLaaS------VsiW~~ 386 (845)
||+ +++++ |++|..
T Consensus 328 Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 328 DGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred CCCeEEEEEcCCCCeEEEEEC
Confidence 888 66665 555543
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-09 Score=123.63 Aligned_cols=248 Identities=10% Similarity=0.060 Sum_probs=162.6
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC--cEEEEECCCCcEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG--SIKIWNLAVPTVQ 93 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG--tV~VWDl~tg~~v 93 (845)
.....|+|++ +++++++...++.|++||..++........... .. ++|+++++.|+++..++ .|.+|+...+...
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 4688999998 888888877789999999988777665554333 33 99999999999888766 7999998776554
Q ss_pred EEE----cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE----EcCCCCCe-E-EEEEecC-CCEEEEEeC
Q psy467 94 RTL----NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT----YRGHSKSI-N-SIRFSPD-GQWIASGGE 162 (845)
Q Consensus 94 ~~l----~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~----~~~h~~~V-~-sLafSPd-g~~Lasgs~ 162 (845)
..+ ......+.+++++|++..|+++..++.|+.||..++..... ..+....- . .++|+|+ +.++++-..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 444 22445678999999655666677889999999987654322 22222222 3 8999995 555555556
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
++.|+. |+.... . ..+.++... .. .
T Consensus 288 ~~~I~~-------------~~~~g~-~---------------------~~~~g~~~~--~g---~--------------- 312 (409)
T 3hrp_A 288 LSSVYK-------------ITPDGE-C---------------------EWFCGSATQ--KT---V--------------- 312 (409)
T ss_dssp TTEEEE-------------ECTTCC-E---------------------EEEEECTTC--CS---C---------------
T ss_pred CCEEEE-------------EecCCC-E---------------------EEEEeCCCC--CC---c---------------
Confidence 677777 775422 1 122222100 00 0
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCeEEEEecCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFSLVSTTEKN 321 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~~l~tl~gh 321 (845)
.++. ...........++++++|+ ++++-. .++.|+.||+.++.. .++.++
T Consensus 313 ------------------~dg~-----~~~~~~~~P~gia~d~dG~-----lyvad~~~~~~I~~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 313 ------------------QDGL-----REEALFAQPNGMTVDEDGN-----FYIVDGFKGYCLRKLDILDGYV-STVAGQ 363 (409)
T ss_dssp ------------------BCEE-----GGGCBCSSEEEEEECTTCC-----EEEEETTTTCEEEEEETTTTEE-EEEEEC
T ss_pred ------------------CCCc-----ccccEeCCCeEEEEeCCCC-----EEEEeCCCCCEEEEEECCCCEE-EEEeCC
Confidence 0000 0000012235666677766 788887 889999999887764 444443
Q ss_pred ---------------CCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 322 ---------------SSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 322 ---------------~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
-.....++++++|.++++-..++ |+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 23588999999987777666666 877765
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-09 Score=124.05 Aligned_cols=283 Identities=11% Similarity=-0.009 Sum_probs=177.2
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE----------CCCcEEEEECCCCc
Q psy467 27 SGQVLATGGDD-----KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC----------QSGSIKIWNLAVPT 91 (845)
Q Consensus 27 dg~~LaTgs~D-----G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs----------~DGtV~VWDl~tg~ 91 (845)
++..+++.... +.|.++|..+++.+.++..-..+ .++++||+++|+++. .++.|.++|..+++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 66766666542 69999999999999998765556 899999999888876 36789999999999
Q ss_pred EEEEEcCC-------CCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC-CEEEEEe
Q psy467 92 VQRTLNGH-------KSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGG 161 (845)
Q Consensus 92 ~v~~l~~h-------~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg-~~Lasgs 161 (845)
.+..+... ......+.|+|||++++++.. ++.|.+.|+.+++.+.++.... . ....|++ ..+++.+
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNC 236 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEc
Confidence 98887522 123467899999999998874 5789999999999988876321 1 2333433 4555666
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccC----CCCC---CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPL----GTPP---PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l----~~~~---~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
.||.+.+ .+..+++.. ..+. ......+.+.+++..+..... .. .+.+.+.....
T Consensus 237 ~dG~~~~-------------V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g-----~V~ViD~~~~~ 297 (426)
T 3c75_H 237 RDGSLAR-------------VDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TG-----KIFQADLTAEG 297 (426)
T ss_dssp TTSSEEE-------------EECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TS-----EEEEEEECSSC
T ss_pred CCCCEEE-------------EECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CC-----cEEEEeccCCc
Confidence 6777666 444333221 0000 111123445666655443321 11 11121110000
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe---------CCCeEE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS---------ADRTVN 305 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs---------~DG~I~ 305 (845)
... . . .|..... .....-........++++|+++. ++++.. .++.|.
T Consensus 298 ~~v--------~--------~--~~~~~~~--~~i~~g~~p~g~~~va~s~dg~r----lyVa~~~~~~gthk~~s~~Vs 353 (426)
T 3c75_H 298 ATF--------R--------A--PIEALTE--AERADDWRPGGWQQTAYHRQSDR----IYLLVDQRDEWKHKAASRFVV 353 (426)
T ss_dssp EEE--------C--------C--CEESSCT--TTGGGTEEECSSSCEEEEGGGTE----EEEEEEECCTTCTTSCEEEEE
T ss_pred eEE--------e--------e--eeeeccc--cccccccccCCceeeEEcCCCCE----EEEEecccccccccCCCCEEE
Confidence 000 0 0 0000000 00000000112234678888772 333322 135799
Q ss_pred EEECCCCeEEEEecCCCCCEEEEEEeCCCC-EEEEEeC-CC-EEEEEecCCceEEEe
Q psy467 306 FWDLEKFSLVSTTEKNSSTIRRLTFSEGGE-CLLGGDT-EG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~~~VtslafSpdG~-~Lasgs~-DG-I~IWDl~tgk~l~tl 359 (845)
++|+.+++.+.++... .....++|+|||+ .++++.. ++ |.++|..+++.+.++
T Consensus 354 VID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 354 VLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9999999999988742 3588999999999 8888884 66 999999999999887
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=6e-09 Score=113.34 Aligned_cols=228 Identities=12% Similarity=-0.023 Sum_probs=149.1
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
-..+.+|+|+++.++++...++.|..|+..+++.. .+. ....+.+++|+++|+++++. . ..|.+||..+++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEe
Confidence 45788999955667777777889999999877643 333 35679999999999877754 3 45999999888754433
Q ss_pred cCC----CCCeEEEEEccCCCEEEEEEC------CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCc
Q psy467 97 NGH----KSSITSVDFHPYGDYLCSGSL------DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGV 165 (845)
Q Consensus 97 ~~h----~~~V~~lafspdg~~Lasgs~------DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~ 165 (845)
... ...+.+++++|+|+++++... .+.|..++ +++.. .+.........++|+||++.++.+. .++.
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 211 235789999999987665432 24566666 45433 3322334578899999998776554 4677
Q ss_pred EEEeeeeccCCceeEEEECC--CC-ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 166 VRIGASFHLTNTSIHVVDLS--LV-HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~--tg-~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
|.+ ||+. ++ .... .+.+..+....
T Consensus 203 I~~-------------~d~~~~~Gl~~~~---------------~~~~~~~~~~~------------------------- 229 (326)
T 2ghs_A 203 LMR-------------VPLDARTGLPTGK---------------AEVFIDSTGIK------------------------- 229 (326)
T ss_dssp EEE-------------EEBCTTTCCBSSC---------------CEEEEECTTSS-------------------------
T ss_pred EEE-------------EEcccccCCcccC---------------ceEEEECCCCC-------------------------
Confidence 888 8875 44 2200 00000000000
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
.....+++.++|. +.++...++.|.+||. +++.+..+..+.
T Consensus 230 ---------------------------------~~p~gi~~d~~G~-----lwva~~~~~~v~~~d~-~g~~~~~i~~~~ 270 (326)
T 2ghs_A 230 ---------------------------------GGMDGSVCDAEGH-----IWNARWGEGAVDRYDT-DGNHIARYEVPG 270 (326)
T ss_dssp ---------------------------------SEEEEEEECTTSC-----EEEEEETTTEEEEECT-TCCEEEEEECSC
T ss_pred ---------------------------------CCCCeeEECCCCC-----EEEEEeCCCEEEEECC-CCCEEEEEECCC
Confidence 0112344445554 6776666789999998 577777777666
Q ss_pred CCEEEEEEe-CCCCEEEEEeCC
Q psy467 323 STIRRLTFS-EGGECLLGGDTE 343 (845)
Q Consensus 323 ~~VtslafS-pdG~~Lasgs~D 343 (845)
..+++++|+ ++++.|++++..
T Consensus 271 ~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 271 KQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp SBEEEEEEESTTSCEEEEEEBC
T ss_pred CCcEEEEEecCCCCEEEEEecC
Confidence 789999999 898877665543
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.3e-09 Score=115.05 Aligned_cols=240 Identities=12% Similarity=0.018 Sum_probs=158.2
Q ss_pred eeEEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
.++.+..+.....+.+|++ +|+ +++++..++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|
T Consensus 36 ~~~~l~~~~~~~egp~~~~-~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWE-AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCEEEECCCSSEEEEEEEG-GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred ceEEEecCCcCccCCeEeC-CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEE
Confidence 3456666777888999999 777 6677777899999998 444 44555567789999999999977665556889999
Q ss_pred ECCCCcEEEEEcCC----CCCeEEEEEccCCCEEEE----EEC-------------CCeEEEEECCCCceEEEEcCCCCC
Q psy467 86 NLAVPTVQRTLNGH----KSSITSVDFHPYGDYLCS----GSL-------------DSFIKLWDLRRKGCIYTYRGHSKS 144 (845)
Q Consensus 86 Dl~tg~~v~~l~~h----~~~V~~lafspdg~~Las----gs~-------------DG~I~IWDl~t~~~l~~~~~h~~~ 144 (845)
+.+ ++........ ...+.+++++++|+++++ |.. .+.|..||..+++..... ....
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~ 189 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH 189 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC
Confidence 986 5543322211 134678999999998776 332 256788887666654333 3345
Q ss_pred eEEEEEecCCCEEEEEeCC------CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCC
Q psy467 145 INSIRFSPDGQWIASGGED------GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRP 218 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~D------G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~ 218 (845)
...++|+||++.|+.+... +.|.. |++..+.. .. ...+...
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~-------------~~~~~~~l-~~-----------------~~~~~~~-- 236 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITA-------------FAWRDGAL-HD-----------------RRHFASV-- 236 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEE-------------EEEETTEE-EE-----------------EEEEECC--
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEE-------------EEecCCCc-cC-----------------CeEEEEC--
Confidence 7889999999988777664 56666 77653221 00 0000000
Q ss_pred CCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE
Q psy467 219 GGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS 298 (845)
Q Consensus 219 ~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg 298 (845)
+. .....+++.++|+ +.++.
T Consensus 237 ------------------------------------------~~-------------~~pdgi~~d~~G~-----lwv~~ 256 (305)
T 3dr2_A 237 ------------------------------------------PD-------------GLPDGFCVDRGGW-----LWSSS 256 (305)
T ss_dssp ------------------------------------------SS-------------SCCCSEEECTTSC-----EEECC
T ss_pred ------------------------------------------CC-------------CCCCeEEECCCCC-----EEEec
Confidence 00 0122345555555 44443
Q ss_pred eCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Q psy467 299 SADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG 349 (845)
Q Consensus 299 s~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWD 349 (845)
.+ .|.+||. +++.+..+..+. .+.+++|+++++.|+.++.+++..++
T Consensus 257 -~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 257 -GT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp -SS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred -CC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 44 5999998 477777776544 58999999999999988887744333
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.24 E-value=7.1e-09 Score=110.92 Aligned_cols=236 Identities=11% Similarity=0.136 Sum_probs=147.3
Q ss_pred cCCCCCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc
Q psy467 55 SGHSTPVESVQFGNGEE-TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133 (845)
Q Consensus 55 ~~h~~~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~ 133 (845)
..+..-..+..|++++. .+++...++.|..||..++.. ..+. ....+.+++++++|+++++ . ++.|.+||..+++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS 84 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc
Confidence 33445567899999655 455555688999999998765 3343 4567999999999995544 4 5679999998776
Q ss_pred eEEEEcC----CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe
Q psy467 134 CIYTYRG----HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 134 ~l~~~~~----h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
....... ....+.+++++|+|+++++......... ......+.+ |.+..... .
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~--~~~~~~~~l--~~~d~~g~-------------------~ 141 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPA--VLERHQGAL--YSLFPDHH-------------------V 141 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTT--BCCTTCEEE--EEECTTSC-------------------E
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccc--cccCCCcEE--EEEECCCC-------------------E
Confidence 5433321 1234788999999986664432211000 000000001 22211111 0
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCc
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~ 289 (845)
...... ....+.++|+||++.
T Consensus 142 ~~~~~~-----------------------------------------------------------~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 142 KKYFDQ-----------------------------------------------------------VDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEEE-----------------------------------------------------------ESBEEEEEECTTSCE
T ss_pred EEEeec-----------------------------------------------------------cccccceEEcCCCCE
Confidence 100000 011234566666652
Q ss_pred ccceEEEEEeCCCeEEEEEC--CCCeE-----EEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC
Q psy467 290 LCFILTTSSSADRTVNFWDL--EKFSL-----VSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM 361 (845)
Q Consensus 290 ~~~~lLatgs~DG~I~IWDl--~s~~~-----l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~ 361 (845)
++++.+.++.|.+||+ .++.. +..+..+.+....++++++|++.++...++ |.+||.++++.+..+..
T Consensus 163 ----lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 163 ----FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp ----EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred ----EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 4456666889999987 45543 223333345688999999998777777677 99999999999999988
Q ss_pred CCCCeEEEEEc--CCceEEEE
Q psy467 362 GWGKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 362 h~~~VtsVafS--dg~lLaaS 380 (845)
+...+++++|. +++.|.++
T Consensus 239 p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 239 PVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp SSSBEEEEEEESGGGCEEEEE
T ss_pred CCCCceEEEEeCCCCCEEEEE
Confidence 87889999998 55655544
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.9e-08 Score=105.50 Aligned_cols=152 Identities=11% Similarity=0.011 Sum_probs=111.6
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEE-EecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM-SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
.+...+.++++.+ +|.++++...++.|..||.. ++... .+......+.++++.++++++++...++.|..||.. ++
T Consensus 59 ~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 59 TPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp STTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCcceeEEECC-CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC
Confidence 3446799999998 88877777667899999987 55432 223345679999999999888777668899999988 65
Q ss_pred EEEE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 92 VQRT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 92 ~v~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.... +......+.++++.++++.+++...++.|..||. +++.... .......+.+++++++|+++++....+.|..
T Consensus 136 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 213 (300)
T 2qc5_A 136 IYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGR 213 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred EEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEE
Confidence 5432 3334567899999999996666666788999998 5554432 2233456889999999987766666677888
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.22 E-value=7.6e-09 Score=116.67 Aligned_cols=227 Identities=7% Similarity=-0.019 Sum_probs=151.5
Q ss_pred CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC--eEEEEECCCCceEE
Q psy467 59 TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS--FIKLWDLRRKGCIY 136 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG--~I~IWDl~t~~~l~ 136 (845)
.....|+|+++++++++...++.|++||..++......... .... ++|+++++.|++++.++ .|.+|+...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 46889999999997777777799999999987766555543 3334 99999999999988766 79999987665544
Q ss_pred EE----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE
Q psy467 137 TY----RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS 212 (845)
Q Consensus 137 ~~----~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~ 212 (845)
.+ ......+.+++++|++..|+++..++.|+. ||..++.. ..
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~-------------~d~~~~~~---------------------~~ 254 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGR-------------FNVKTQEV---------------------TL 254 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEE-------------EETTTCCE---------------------EE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEE-------------EECCCCCE---------------------EE
Confidence 44 224466789999996555666777788888 98875543 11
Q ss_pred EecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC-CCccc
Q psy467 213 FTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ-SPMLC 291 (845)
Q Consensus 213 ~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd-g~~~~ 291 (845)
+...... . ..+. .+...++|+|+ +.
T Consensus 255 ~~~~~~~-----------------------------------g-----~~~~-----------~P~~~ia~~p~~g~--- 280 (409)
T 3hrp_A 255 IKQLELS-----------------------------------G-----SLGT-----------NPGPYLIYYFVDSN--- 280 (409)
T ss_dssp EEECCCC-----------------------------------S-----CCCC-----------SSCCEEEEETTTTE---
T ss_pred Eeccccc-----------------------------------C-----CCCC-----------CccccEEEeCCCCE---
Confidence 1110000 0 0000 00114555553 33
Q ss_pred ceEEEEEeCCCeEEEEECCCCeEEEEecCCC---------------CCEEEEEEeCCCCEEEEEe-CCC-EEEEEecCCc
Q psy467 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNS---------------STIRRLTFSEGGECLLGGD-TEG-LKVYGWEPAR 354 (845)
Q Consensus 292 ~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~---------------~~VtslafSpdG~~Lasgs-~DG-I~IWDl~tgk 354 (845)
++++...++.|+.|+.... +..+.++. .....++++++|+++++-. .++ |+.|++.++.
T Consensus 281 --lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 281 --FYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp --EEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred --EEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 6777777889999997754 33333332 3578999999999666665 566 9999987776
Q ss_pred eEEEecCC---------------CCCeEEEEEc-CCceEEEE
Q psy467 355 QYDAQPMG---------------WGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 355 ~l~tl~~h---------------~~~VtsVafS-dg~lLaaS 380 (845)
. .++.++ -....+++++ +|.++++-
T Consensus 357 v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad 397 (409)
T 3hrp_A 357 V-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAE 397 (409)
T ss_dssp E-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEE
T ss_pred E-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEE
Confidence 4 444333 2468999999 76665554
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=9.5e-10 Score=132.34 Aligned_cols=146 Identities=11% Similarity=0.134 Sum_probs=99.9
Q ss_pred cCCCcEEEEEEecCCCCEEEEEe-----CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC-------
Q psy467 13 AHGASVNCLALGKKSGQVLATGG-----DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG------- 80 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs-----~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG------- 80 (845)
+|...+..++||| +|++||.+. ....|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 4566789999999 999888543 23579999999998654311 11113567899 999999988774
Q ss_pred ------cEEEEECCCCcE--EEEE--cC-CCCCeEEEEEccCCCEEEEEEC----CCeEEEEECCCCc-eEEEEcCCCCC
Q psy467 81 ------SIKIWNLAVPTV--QRTL--NG-HKSSITSVDFHPYGDYLCSGSL----DSFIKLWDLRRKG-CIYTYRGHSKS 144 (845)
Q Consensus 81 ------tV~VWDl~tg~~--v~~l--~~-h~~~V~~lafspdg~~Lasgs~----DG~I~IWDl~t~~-~l~~~~~h~~~ 144 (845)
.|++|++.++.. ...+ .. |...+..+.|+|||++|+.... ++.|++||+.++. ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 399999987642 2333 33 4455788999999998865442 2589999997763 34555555555
Q ss_pred eEEEEEecCCCEEEEEeC
Q psy467 145 INSIRFSPDGQWIASGGE 162 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~ 162 (845)
.... |+++|..|+..+.
T Consensus 283 ~~~~-~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTN 299 (693)
T ss_dssp CEEE-EEEETTEEEEEEC
T ss_pred eEEE-EeccCCEEEEEEC
Confidence 5554 6677776655543
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.19 E-value=3e-09 Score=116.53 Aligned_cols=270 Identities=11% Similarity=0.071 Sum_probs=167.7
Q ss_pred CcEEEEEEecCCCCEEEEEe--CCCeEEEEECCCCeeEEEe-------cCCCCCeEEEEEcCCCCEEEEEEC-----CCc
Q psy467 16 ASVNCLALGKKSGQVLATGG--DDKKVNLWALGKSNCIMSL-------SGHSTPVESVQFGNGEETLSAGCQ-----SGS 81 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs--~DG~I~IWdl~t~~~i~~l-------~~h~~~V~sLafSpdg~~LaSgs~-----DGt 81 (845)
..+..+++++ +|+++++.. .++.++||.+.+++. ..+ ..|...+.+++++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 7899999999 899888864 234355665545543 322 234568999999999876665433 578
Q ss_pred EEEEECCCCcEEEEEcCC------CCCeEEEEEccCCCEEEEE-E---CCCeEEEEECCCCceEEEEcCCCCCeE-EEEE
Q psy467 82 IKIWNLAVPTVQRTLNGH------KSSITSVDFHPYGDYLCSG-S---LDSFIKLWDLRRKGCIYTYRGHSKSIN-SIRF 150 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h------~~~V~~lafspdg~~Lasg-s---~DG~I~IWDl~t~~~l~~~~~h~~~V~-sLaf 150 (845)
|.+||+.+++.+..+... ...+..+++++++..++.+ . .++.|.+||+.+++..+.+..|..... ...+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999999877766432 2346899999865555444 3 578999999998887766654322110 1345
Q ss_pred ecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 151 SPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 151 SPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
.++|..+.+.+.++.+.. |.. ....++++++++.+......... ++.+
T Consensus 175 ~~~g~~~~~~~~~g~~~~-------------~~~------------~~~gia~s~dg~~ly~~~~~~~~-------l~~~ 222 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIR-------------PHL------------GVNGIVLDAENEWLYLSPMHSTS-------MYRI 222 (343)
T ss_dssp EETTEECBEECTTSCEEC-------------CCC------------CEEEEEECTTSCEEEEEESSCSE-------EEEE
T ss_pred eECCEEEEeccCCCceec-------------eec------------ccceeEeccCCCEEEEEeCCCCe-------EEEE
Confidence 556777777777777766 532 23468888888766654432222 4333
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
.............++.... .. . ........++++++|. ++++...++.|.+||..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~------~~-~-------------g~~g~pdgia~d~~G~-----l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKI------ER-Y-------------SEKPICDGISIDKDHN-----IYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTC------EE-E-------------EECCSCSCEEECTTCC-----EEEEEGGGTEEEEEETT
T ss_pred EHHHhcCCCCChhhhhcce------Ee-c-------------ccCCCCceEEECCCCC-----EEEEccCCCeEEEEECC
Confidence 2211000000011111000 00 0 0011234567777776 88888889999999985
Q ss_pred CCeEEEEecC-CCCCEEEEEEeCCCCEEEEEeCCC
Q psy467 311 KFSLVSTTEK-NSSTIRRLTFSEGGECLLGGDTEG 344 (845)
Q Consensus 311 s~~~l~tl~g-h~~~VtslafSpdG~~Lasgs~DG 344 (845)
+++....... +...+.+++|+++|+++++.+..+
T Consensus 278 ~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 278 DRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp TTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred CCCEEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 6664333322 245689999999998888776544
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.12 E-value=3.8e-10 Score=126.35 Aligned_cols=174 Identities=13% Similarity=0.016 Sum_probs=136.1
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-----------eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-----------CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-----------~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
.++.+++++ ...++++|+.+ .+.+|++.+.. ..... .+.. |+.++| |+++|+++ .++.|++|
T Consensus 39 ~~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 699999999 88899999987 56679864322 11222 3566 999999 89999999 88999999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
|+.+.........|...+.++.+.+.. +++++.||.|.+||+.++.... +...|.|++|||+| ++.|..||.
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSC
T ss_pred EchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCc
Confidence 998877666676778889888877653 8889999999999999877653 34579999999999 678999999
Q ss_pred EEEeeeeccCCceeEEEECCCCcc--CCCC-----------CCCCCcceeecCCCCeEEEEecCCC
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHP--LGTP-----------PPQYTSSVPFSHNTSLRKSFTKGRP 218 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~--l~~~-----------~~~~i~svs~spdg~~l~~~~~h~~ 218 (845)
+++ |+...+.. ...+ ....+.++.|.+++.++..+.....
T Consensus 184 i~~-------------~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~~~ 236 (388)
T 1xip_A 184 FQS-------------FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVIS 236 (388)
T ss_dssp EEE-------------EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCC
T ss_pred EEE-------------EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCCCC
Confidence 999 87766552 1111 2456788999999998888776553
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.12 E-value=4.1e-08 Score=106.71 Aligned_cols=218 Identities=10% Similarity=-0.039 Sum_probs=140.4
Q ss_pred CeEEEEEcCCCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE
Q psy467 60 PVESVQFGNGEE-TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 60 ~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~ 138 (845)
-..+.+|+|++. .+++...++.|..||..+++.. .+. ....+.+++|+++|+++++. .+ .|.+||..+++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 457889999755 4555556889999999877543 333 34579999999999876654 44 4999999887754332
Q ss_pred cCC----CCCeEEEEEecCCCEEEEEeCC------CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 139 RGH----SKSINSIRFSPDGQWIASGGED------GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 139 ~~h----~~~V~sLafSPdg~~Lasgs~D------G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
... ...+.+++++|+|+++++...+ +.|.. ++ +++.
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~-------------~~--~g~~------------------- 171 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH-------------VA--KGKV------------------- 171 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE-------------EE--TTEE-------------------
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE-------------Ee--CCcE-------------------
Confidence 211 2357899999999876654321 22322 44 2222
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSP 288 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~ 288 (845)
..+..+ . .....++|+||++
T Consensus 172 --~~~~~~----------~------------------------------------------------~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 172 --TKLFAD----------I------------------------------------------------SIPNSICFSPDGT 191 (326)
T ss_dssp --EEEEEE----------E------------------------------------------------SSEEEEEECTTSC
T ss_pred --EEeeCC----------C------------------------------------------------cccCCeEEcCCCC
Confidence 111000 0 0112445555554
Q ss_pred cccceEEEEEeCCCeEEEEECC--CC-e-----EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 289 MLCFILTTSSSADRTVNFWDLE--KF-S-----LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 289 ~~~~~lLatgs~DG~I~IWDl~--s~-~-----~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
. ++++.+.++.|.+||+. ++ . .+..+.........++++++|.+.++...++ |.+|+. +++.+..+
T Consensus 192 ~----lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 192 T----GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARY 266 (326)
T ss_dssp E----EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEE
T ss_pred E----EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEE
Confidence 1 33455567899999985 55 2 2333443445678999999998777766666 999998 67777888
Q ss_pred cCCCCCeEEEEEc--CCceEEEE
Q psy467 360 PMGWGKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 360 ~~h~~~VtsVafS--dg~lLaaS 380 (845)
..+...+++++|+ +++.|.++
T Consensus 267 ~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 267 EVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp ECSCSBEEEEEEESTTSCEEEEE
T ss_pred ECCCCCcEEEEEecCCCCEEEEE
Confidence 7777789999998 55655444
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.10 E-value=2.2e-08 Score=111.79 Aligned_cols=270 Identities=13% Similarity=0.024 Sum_probs=167.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEe----------CCCeEEEEECCCCeeEEEecCC-------CCCeEEEEEcCCCC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGG----------DDKKVNLWALGKSNCIMSLSGH-------STPVESVQFGNGEE 71 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs----------~DG~I~IWdl~t~~~i~~l~~h-------~~~V~sLafSpdg~ 71 (845)
.++..-..+ .++++| +|+++++++ .++.|.+||..+.+.+.++.-. ......++|+|||+
T Consensus 73 ~~I~vG~~P--~va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk 149 (386)
T 3sjl_D 73 GMIDGGFLP--NPVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK 149 (386)
T ss_dssp EEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS
T ss_pred EEEECCCCC--cEEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC
Confidence 344433344 499999 888777765 3578999999999988887522 12456799999999
Q ss_pred EEEEEEC--CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-CceEEEEcCC----CCC
Q psy467 72 TLSAGCQ--SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KGCIYTYRGH----SKS 144 (845)
Q Consensus 72 ~LaSgs~--DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~~l~~~~~h----~~~ 144 (845)
+|+++.. ++.|.++|+.+++.+.++.... + ...+....+.+++.+.||.+.+.++.+ ++.......+ ...
T Consensus 150 ~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~ 226 (386)
T 3sjl_D 150 TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEF 226 (386)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSC
T ss_pred EEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccc
Confidence 9988864 6899999999999999986322 1 223333456778888999999999976 5543322111 112
Q ss_pred e-EEEEEe-cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc--CCCC------------CCCCCcceeecCCCC
Q psy467 145 I-NSIRFS-PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP--LGTP------------PPQYTSSVPFSHNTS 208 (845)
Q Consensus 145 V-~sLafS-Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~--l~~~------------~~~~i~svs~spdg~ 208 (845)
+ ....|. ++|++++ .+.+|.+++ .|+.+... .... .+.....++++++++
T Consensus 227 ~~~~~~~~~~dG~~~~-vs~~g~V~v-------------~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~ 292 (386)
T 3sjl_D 227 LINHPAYSQKAGRLVW-PTYTGKIHQ-------------IDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD 292 (386)
T ss_dssp BCSCCEEETTTTEEEE-EBTTSEEEE-------------EECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTT
T ss_pred ccccceeEcCCCcEEE-EeCCCEEEE-------------EECCCCcceeecceeccccccccccccCCCcceeeECCCCC
Confidence 2 124664 5675544 556788888 88765532 1111 123444577777777
Q ss_pred eEEEEecCCCCCc--cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 209 LRKSFTKGRPGGT--KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 209 ~l~~~~~h~~~~~--~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
.+.........+. ...-.| ..++.... +....+.....+..+++++|
T Consensus 293 ~lyV~~~~~~~~~hk~~~~~V-----------------------------~viD~~t~--kv~~~i~vg~~~~~lavs~D 341 (386)
T 3sjl_D 293 RIYLLVDQRDEWRHKTASRFV-----------------------------VVLDAKTG--ERLAKFEMGHEIDSINVSQD 341 (386)
T ss_dssp EEEEEEEECCTTCTTSCEEEE-----------------------------EEEETTTC--CEEEEEEEEEEECEEEECSS
T ss_pred eEEEEeccccccccCCCCCEE-----------------------------EEEECCCC--eEEEEEECCCCcceEEECCC
Confidence 6666432110000 000111 12222111 11112223345678999999
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCC
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEG 333 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpd 333 (845)
++.. ++++...++.|.++|..+++.+.++..- +.-+.|.+++|
T Consensus 342 ~~~~---ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 342 EKPL---LYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp SSCE---EEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred CCeE---EEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 8631 3444556899999999999999998853 34566777776
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=8e-09 Score=114.99 Aligned_cols=281 Identities=7% Similarity=-0.043 Sum_probs=167.7
Q ss_pred EEEEEeCCC----eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE----------CCCcEEEEECCCCcEEEE
Q psy467 30 VLATGGDDK----KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC----------QSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 30 ~LaTgs~DG----~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs----------~DGtV~VWDl~tg~~v~~ 95 (845)
.+++...++ +|.++|..+++.+.++.....+ .+.++||+++++++. .++.|.+||+.+++.+.+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 344444444 8889999999999998765666 799999999998886 368899999999999999
Q ss_pred EcCC-------CCCeEEEEEccCCCEEEEEEC--CCeEEE--EECCCCceEEEEcCCCCCeEEEEEecCC-CEEEEEeCC
Q psy467 96 LNGH-------KSSITSVDFHPYGDYLCSGSL--DSFIKL--WDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGED 163 (845)
Q Consensus 96 l~~h-------~~~V~~lafspdg~~Lasgs~--DG~I~I--WDl~t~~~l~~~~~h~~~V~sLafSPdg-~~Lasgs~D 163 (845)
+... ......++++|||++++++.. +..|.+ +|+.+ +..+... +. +.+.|++ ..+++.+.|
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~d 184 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCP 184 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCT
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCC
Confidence 8633 123568999999999998875 457888 88876 4444321 11 2234444 344556677
Q ss_pred CcEEEeeeeccCCceeEEEECCC-----CccCCC----CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSL-----VHPLGT----PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~t-----g~~l~~----~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
|.+.+ .|+.+ ++.... ........ . .+++..+..... .. +..++...
T Consensus 185 g~~~~-------------vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~--~~-------V~viD~~~ 240 (368)
T 1mda_H 185 ASLAA-------------SDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA--SS-------ILQGDIPA 240 (368)
T ss_dssp TSCEE-------------EECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS--SC-------CEEEECCS
T ss_pred CCEEE-------------EECccccccCCeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC--CE-------EEEEECCC
Confidence 77777 67765 332210 00000000 2 333332222221 11 11111100
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCC-Cc---ccccccCceeEEEcCCCCcccceEEEEE-e---C-----C
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS-GT---CVPVSVSRTSLSILPQSPMLCFILTTSS-S---A-----D 301 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~-~~---~~~~~~~I~slafSPdg~~~~~~lLatg-s---~-----D 301 (845)
... . +-. .+... .. ..........++++||++ .+.++ . . +
T Consensus 241 ~~~-----------------~---v~~--~~~~~~~~~~~~~~~p~g~~~v~~s~dg~-----~lyV~~~~~~~~~~~~~ 293 (368)
T 1mda_H 241 AGA-----------------T---MKA--AIDGNESGRKADNFRSAGFQMVAKLKNTD-----GIMILTVEHSRSCLAAA 293 (368)
T ss_dssp SCC-----------------E---EEC--CCCSSCTHHHHTTEEECSSSCEEEETTTT-----EEEEEEEECSSCTTSCE
T ss_pred Ccc-----------------e---EEE--EEEeccccccccccccCcceeeEEcCCCC-----EEEEEeccccCcccccC
Confidence 000 0 000 00000 00 000011122367888877 44443 3 2 2
Q ss_pred CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCE-EEEEe-CCC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 302 RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGEC-LLGGD-TEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~-Lasgs-~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
+.+.++|+.+++.+.++.... ....++|+|||+. +++.. .++ |.++|+.+++.+.++..... ...+++.
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~ 365 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQ 365 (368)
T ss_dssp EEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECC
T ss_pred CCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEee
Confidence 356699999999988887532 5889999999985 45555 467 99999999999999875533 3455543
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.7e-08 Score=108.26 Aligned_cols=240 Identities=12% Similarity=0.026 Sum_probs=142.8
Q ss_pred eEEEecCCCCCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEE
Q psy467 50 CIMSLSGHSTPVESVQFGNGEE-TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 50 ~i~~l~~h~~~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWD 128 (845)
.+..+...........|+++++ .+++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 4445555666788999999998 5566666889999998 454 344444566789999999999666655667899999
Q ss_pred CCCCceEEEEcCC----CCCeEEEEEecCCCEEEE----EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcc
Q psy467 129 LRRKGCIYTYRGH----SKSINSIRFSPDGQWIAS----GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS 200 (845)
Q Consensus 129 l~t~~~l~~~~~h----~~~V~sLafSPdg~~Las----gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~s 200 (845)
.. ++........ ...+.+++++++|+++++ |..+..-............|+.||..+++.
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~----------- 181 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL----------- 181 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-----------
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-----------
Confidence 86 5533222111 134667889998887765 221100000000000011122244433332
Q ss_pred eeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCcee
Q psy467 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTS 280 (845)
Q Consensus 201 vs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~s 280 (845)
.... . ......
T Consensus 182 ---------~~~~-~-----------------------------------------------------------~~~p~g 192 (305)
T 3dr2_A 182 ---------QRMA-D-----------------------------------------------------------LDHPNG 192 (305)
T ss_dssp ---------EEEE-E-----------------------------------------------------------ESSEEE
T ss_pred ---------EEEe-c-----------------------------------------------------------CCCCcc
Confidence 1100 0 011234
Q ss_pred EEEcCCCCcccceEEEEEeCC------CeEEEEECCCCeE--EEEe-cCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEec
Q psy467 281 LSILPQSPMLCFILTTSSSAD------RTVNFWDLEKFSL--VSTT-EKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351 (845)
Q Consensus 281 lafSPdg~~~~~~lLatgs~D------G~I~IWDl~s~~~--l~tl-~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~ 351 (845)
++|+||++ .|+.+... +.|++||+..... ...+ ....+....++++++|+ |.+++.++|.+|+.
T Consensus 193 l~~spdg~-----~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~gv~~~~~- 265 (305)
T 3dr2_A 193 LAFSPDEQ-----TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGTGVCVFDS- 265 (305)
T ss_dssp EEECTTSS-----EEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSSEEEEECT-
T ss_pred eEEcCCCC-----EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCCcEEEECC-
Confidence 55566655 56665554 7899999876541 1111 11234456789999999 44455556999997
Q ss_pred CCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 352 PARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 352 tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.++.+..+..+. .+.+++|+ +++.|.++
T Consensus 266 ~g~~~~~~~~~~-~~~~~~f~~d~~~L~it 294 (305)
T 3dr2_A 266 DGQLLGHIPTPG-TASNCTFDQAQQRLFIT 294 (305)
T ss_dssp TSCEEEEEECSS-CCCEEEECTTSCEEEEE
T ss_pred CCCEEEEEECCC-ceeEEEEeCCCCEEEEE
Confidence 567777776655 58999998 77666554
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.9e-08 Score=119.45 Aligned_cols=295 Identities=12% Similarity=0.112 Sum_probs=173.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCC--CCCeEEEEEcC---CCCEEEEEE------CCCcEEEEECCCCcEEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGH--STPVESVQFGN---GEETLSAGC------QSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h--~~~V~sLafSp---dg~~LaSgs------~DGtV~VWDl~tg~~v~~l 96 (845)
+..|++++.|+.|..+|..+|+.+..+... ......+..+| ++ .+++++ .+|.|..||..+|+.+..+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 457888889999999999999998877642 11111111122 44 444443 3689999999999998877
Q ss_pred cCCC-------------------------------CCeEEEEEccCCCEEEEEECCCe-------------------EEE
Q psy467 97 NGHK-------------------------------SSITSVDFHPYGDYLCSGSLDSF-------------------IKL 126 (845)
Q Consensus 97 ~~h~-------------------------------~~V~~lafspdg~~Lasgs~DG~-------------------I~I 126 (845)
.... .....++++|++..++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 5211 00125788898889999887764 999
Q ss_pred EECCCCceEEEEcCCC---------CCeEEEEEecCCC---EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC
Q psy467 127 WDLRRKGCIYTYRGHS---------KSINSIRFSPDGQ---WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP 194 (845)
Q Consensus 127 WDl~t~~~l~~~~~h~---------~~V~sLafSPdg~---~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~ 194 (845)
||..+++.+..+.... ..+.......+|+ .++.++.+|.+++ +|..+|+.+
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~-------------lD~~tG~~l---- 342 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYV-------------IDRATGELL---- 342 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEE-------------EETTTCCEE----
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEE-------------EECCCCCEe----
Confidence 9999999998886421 1222223333565 6888889999999 999999883
Q ss_pred CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccccc
Q psy467 195 PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPV 274 (845)
Q Consensus 195 ~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~ 274 (845)
......... + ...+....... .......+. .... ......|... -
T Consensus 343 ----------------~~~~~~~~~-----w-~~~~~~~~~~p-i~~~~~~~~-~~~~--~~~~~~p~~~---------G 387 (689)
T 1yiq_A 343 ----------------SAKGIVPQS-----W-TKGMDMKTGRP-ILDEENAAY-WKNG--KRNLVTPAFW---------G 387 (689)
T ss_dssp ----------------EEEESSCCS-----S-EEEEETTTTEE-EECHHHHCT-TTSS--SCEEESSCTT---------C
T ss_pred ----------------ccccccccc-----c-ccccCccCCCc-ccchhhccc-cCCC--CeeEeCCCcc---------c
Confidence 211111000 0 00000000000 000000000 0000 0000111000 0
Q ss_pred ccCceeEEEcCCCCcccceEEEEEe---------------------------------------------CCCeEEEEEC
Q psy467 275 SVSRTSLSILPQSPMLCFILTTSSS---------------------------------------------ADRTVNFWDL 309 (845)
Q Consensus 275 ~~~I~slafSPdg~~~~~~lLatgs---------------------------------------------~DG~I~IWDl 309 (845)
...-..++++|+.. ++++.. .+|.|..||+
T Consensus 388 g~~w~~~a~dp~~~-----~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~ 462 (689)
T 1yiq_A 388 AHDWQPMSYNPDTG-----LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP 462 (689)
T ss_dssp SSCSSCCEEETTTT-----EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET
T ss_pred ccCCCcceECCCCC-----EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC
Confidence 00012244444444 333321 1478999999
Q ss_pred CCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCC-eEEEEEc-CCceEEEEE
Q psy467 310 EKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGK-VQDLAVT-GTQLWFRRV 381 (845)
Q Consensus 310 ~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~-VtsVafS-dg~lLaaSV 381 (845)
.+++.+..+..+. ++..-.++..|..+++++.|+ |+.||.++|+.+-.+....+. ..-+.|. +|+.+++..
T Consensus 463 ~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 463 VKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp TTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 9999998887543 333346667788999999999 999999999999887754432 3456776 777655543
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.07 E-value=4.3e-09 Score=117.79 Aligned_cols=169 Identities=9% Similarity=0.043 Sum_probs=124.6
Q ss_pred CeEEEEEccCCCEEEEEECCCeEEEEECCCCc-----------eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEee
Q psy467 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG-----------CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170 (845)
Q Consensus 102 ~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~-----------~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~ 170 (845)
++..+++++...++++|+.++ +.+|++.+.. ..... .+.. |.+++| |+++|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v-- 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYS-- 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEE--
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEE--
Confidence 689999999999999999885 5669875332 11222 2556 999999 89999998 8899999
Q ss_pred eeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhcc
Q psy467 171 SFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250 (845)
Q Consensus 171 ~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~ 250 (845)
||+.+... ......+... +
T Consensus 111 -----------~dv~sl~~--------------------~~~~~~~~~~-------v----------------------- 129 (388)
T 1xip_A 111 -----------LDLEELSE--------------------FRTVTSFEKP-------V----------------------- 129 (388)
T ss_dssp -----------EESSSTTC--------------------EEEEEECSSC-------E-----------------------
T ss_pred -----------EEchhhhc--------------------cCccceeecc-------e-----------------------
Confidence 99987654 2222222222 2
Q ss_pred CCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEE
Q psy467 251 NPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTF 330 (845)
Q Consensus 251 ~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtslaf 330 (845)
..+.+. .. -+++++.||.|.+||+.++.... +...|+|++|
T Consensus 130 ----~~i~~~--~p-----------------------------~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~W 170 (388)
T 1xip_A 130 ----FQLKNV--NN-----------------------------TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDV 170 (388)
T ss_dssp ----EEEEEC--SS-----------------------------EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEE
T ss_pred ----eeEEec--CC-----------------------------CEEEEECCCCEEEEEccCCcccc----ccCCceEEEE
Confidence 222221 11 36777899999999999887654 3357999999
Q ss_pred eCCCCEEEEEeCCC-EEEEEecCCce--EEEe------c---CCCCCeEEEEEc-CCceEEEE
Q psy467 331 SEGGECLLGGDTEG-LKVYGWEPARQ--YDAQ------P---MGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 331 SpdG~~Lasgs~DG-I~IWDl~tgk~--l~tl------~---~h~~~VtsVafS-dg~lLaaS 380 (845)
||+| ++.|..|| +++|+.+.+++ ..++ . +|...|.+|.|. +++++++.
T Consensus 171 SpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 171 TNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp CSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999 67888999 99999988775 5566 3 477889999999 77777654
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.06 E-value=2.6e-08 Score=119.71 Aligned_cols=288 Identities=11% Similarity=0.074 Sum_probs=176.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCC-C----CCeEE-EEEcCCCCEEEEEEC------CCcEEEEECCCCcEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGH-S----TPVES-VQFGNGEETLSAGCQ------SGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h-~----~~V~s-LafSpdg~~LaSgs~------DGtV~VWDl~tg~~v~~ 95 (845)
+..|++++.|+.|..+|..+|+.+..+..+ . ..+.+ ... .+..+++++. +|.|..||..+|+.+..
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 467888889999999999999999888754 2 11111 111 2345555543 68999999999999988
Q ss_pred EcCCCCC--------------------------------eEEEEEccCCCEEEEEECCC-------------------eE
Q psy467 96 LNGHKSS--------------------------------ITSVDFHPYGDYLCSGSLDS-------------------FI 124 (845)
Q Consensus 96 l~~h~~~--------------------------------V~~lafspdg~~Lasgs~DG-------------------~I 124 (845)
+...... ...+++++++..++.++.++ .|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 7542211 13578889888998887664 59
Q ss_pred EEEECCCCceEEEEcCCC---------CCeEEEEEecCC---CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC
Q psy467 125 KLWDLRRKGCIYTYRGHS---------KSINSIRFSPDG---QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT 192 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~h~---------~~V~sLafSPdg---~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~ 192 (845)
..+|..+++.+..+.... .....+....+| ..++.++.+|.+++ +|..+|+.+
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~-------------lD~~tG~~l-- 350 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFV-------------LDRTNGKFI-- 350 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEE-------------EETTTCCEE--
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEE-------------EECCCCCEe--
Confidence 999999999998876421 122333444467 67888899999999 999999883
Q ss_pred CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec-ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcc
Q psy467 193 PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE-ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271 (845)
Q Consensus 193 ~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~-~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~ 271 (845)
..+...... + ...++ ...... ..... . .+ ......|...
T Consensus 351 ------------------~~~~~~~~~-----~-~~~~d~~g~~~~--~~~~~---~-~~---~~~~~~P~~~------- 390 (677)
T 1kb0_A 351 ------------------SAKNFVPVN-----W-ASGYDKHGKPIG--IAAAR---D-GS---KPQDAVPGPY------- 390 (677)
T ss_dssp ------------------EEEESSCCS-----S-EEEECTTSCEEE--CGGGG---C-TT---SCEECSSCTT-------
T ss_pred ------------------ccccccccC-----c-ccccCCCCceee--ccccC---c-CC---CccEECcCcc-------
Confidence 222111000 0 00000 000000 00000 0 00 0000001000
Q ss_pred cccccCceeEEEcCCCCcccceEEEEEeC-------------------------------------------CCeEEEEE
Q psy467 272 VPVSVSRTSLSILPQSPMLCFILTTSSSA-------------------------------------------DRTVNFWD 308 (845)
Q Consensus 272 ~~~~~~I~slafSPdg~~~~~~lLatgs~-------------------------------------------DG~I~IWD 308 (845)
-...-..++++|++. ++++... .|.|..||
T Consensus 391 --G~~~w~~~a~dp~~~-----~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D 463 (677)
T 1kb0_A 391 --GAHNWHPMSFNPQTG-----LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWD 463 (677)
T ss_dssp --CSSCSSCCEEETTTT-----EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEE
T ss_pred --cccCCCCceEcCCCC-----EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEe
Confidence 000012455555554 4444322 27899999
Q ss_pred CCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCC-CCeEEEEEc-CCceEEEE
Q psy467 309 LEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGW-GKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 309 l~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~-~~VtsVafS-dg~lLaaS 380 (845)
+.+++.+..+.. ..++....++.+|..+++++.|+ +++||..+++.+..+.... ....-+.|. +|+.+++.
T Consensus 464 ~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 464 PVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp TTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 999999888763 33455556777888999999999 9999999999998887543 334456666 77655544
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=7.9e-09 Score=124.31 Aligned_cols=225 Identities=11% Similarity=0.112 Sum_probs=142.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEEC-----CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC--------
Q psy467 56 GHSTPVESVQFGNGEETLSAGCQ-----SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS-------- 122 (845)
Q Consensus 56 ~h~~~V~sLafSpdg~~LaSgs~-----DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG-------- 122 (845)
+|...+..++|||||++||.+.. ...|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 35567889999999999885432 3579999999998654311 11113567899 999999888774
Q ss_pred -----eEEEEECCCCc----eEEEEcC-CCCCeEEEEEecCCCEEEEEeCC----CcEEEeeeeccCCceeEEEECCCCc
Q psy467 123 -----FIKLWDLRRKG----CIYTYRG-HSKSINSIRFSPDGQWIASGGED----GVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 123 -----~I~IWDl~t~~----~l~~~~~-h~~~V~sLafSPdg~~Lasgs~D----G~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
.|++|++.++. ++..... +...+.++.|+|||++|+..... ..+++ +|+.++.
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~-------------~d~~~~~ 270 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYV-------------KDLSQEN 270 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEE-------------EETTSTT
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE-------------EECCCCC
Confidence 39999998764 2333333 44557889999999988654432 35556 8887653
Q ss_pred cCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCC
Q psy467 189 PLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268 (845)
Q Consensus 189 ~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~ 268 (845)
. . ...+..+... . ... +++++.
T Consensus 271 ~------------------~-~~~l~~~~~~-------~---------------------------~~~-~~~~g~---- 292 (693)
T 3iuj_A 271 A------------------P-LLTVQGDLDA-------D---------------------------VSL-VDNKGS---- 292 (693)
T ss_dssp C------------------C-CEEEECSSSS-------C---------------------------EEE-EEEETT----
T ss_pred C------------------c-eEEEeCCCCc-------e---------------------------EEE-EeccCC----
Confidence 2 0 1222222221 1 111 334433
Q ss_pred CcccccccCceeEEEcCCCCcccceEEEEEeCC---CeEEEEECCCCeE--EEEecCCCCCEEEEEEeCCCCEEEEEeC-
Q psy467 269 GTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD---RTVNFWDLEKFSL--VSTTEKNSSTIRRLTFSEGGECLLGGDT- 342 (845)
Q Consensus 269 ~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D---G~I~IWDl~s~~~--l~tl~gh~~~VtslafSpdG~~Lasgs~- 342 (845)
. +++.+..+ +.|..+|+.++.. ...+..|...+. .|++++++|+....
T Consensus 293 --------------------~----l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~ 346 (693)
T 3iuj_A 293 --------------------T----LYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMV 346 (693)
T ss_dssp --------------------E----EEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEE
T ss_pred --------------------E----EEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEE
Confidence 1 44444333 6899999987654 345555655555 89999998876654
Q ss_pred CC---EEEEEecCCceEEEec-CCCCCeEEEEEc-CCceEEEE
Q psy467 343 EG---LKVYGWEPARQYDAQP-MGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 343 DG---I~IWDl~tgk~l~tl~-~h~~~VtsVafS-dg~lLaaS 380 (845)
++ |++|+++.+ ....+. .+.+.+..+.++ ++..++.+
T Consensus 347 ~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 347 DATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFG 388 (693)
T ss_dssp TTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEE
T ss_pred CCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEE
Confidence 44 888888754 444443 244567777887 77666555
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.8e-08 Score=110.20 Aligned_cols=253 Identities=8% Similarity=0.002 Sum_probs=149.5
Q ss_pred CCeEEEEEcCCCCEEEEEEC--CCcEEEEECCCCcEEEEEc-------CCCCCeEEEEEccCCCEEEEEEC-----CCeE
Q psy467 59 TPVESVQFGNGEETLSAGCQ--SGSIKIWNLAVPTVQRTLN-------GHKSSITSVDFHPYGDYLCSGSL-----DSFI 124 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~--DGtV~VWDl~tg~~v~~l~-------~h~~~V~~lafspdg~~Lasgs~-----DG~I 124 (845)
..+..++++++|+.+++... ++.++||.+.+++ +..+. .+...+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67899999999999888642 3435566655554 33332 23457899999999875555433 5789
Q ss_pred EEEECCCCceEEEEcCC------CCCeEEEEEecCCCEEEEE-e---CCCcEEEeeeeccCCceeEEEECCCCccCCCCC
Q psy467 125 KLWDLRRKGCIYTYRGH------SKSINSIRFSPDGQWIASG-G---EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP 194 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~h------~~~V~sLafSPdg~~Lasg-s---~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~ 194 (845)
.+||+.+++.+..+... ...+..+++++++..++.+ . .++.|.+ ||+.+++.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v-------------~d~~~g~~----- 157 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIR-------------VDLQTGLA----- 157 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEE-------------EETTTCCE-----
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEE-------------EECCCCCE-----
Confidence 99999998877766532 2356889999865554444 3 4677888 99887765
Q ss_pred CCCCcceeecCCCCeEEEEecCCCCCcc-ceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccc
Q psy467 195 PQYTSSVPFSHNTSLRKSFTKGRPGGTK-AKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVP 273 (845)
Q Consensus 195 ~~~i~svs~spdg~~l~~~~~h~~~~~~-~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~ 273 (845)
...+.+|...... ..+.+ .+ . .....++++. ...
T Consensus 158 ---------------~r~~~~~~~~~~~~~~~~~------------~g--~----------~~~~~~~~g~------~~~ 192 (343)
T 2qe8_A 158 ---------------ARVLQGYPGIAPEDIDLVI------------DG--V----------PVQIGQPDGT------VIR 192 (343)
T ss_dssp ---------------EEECTTCTTTSCCSCCCEE------------TT--E----------ECBEECTTSC------EEC
T ss_pred ---------------EEEecCCCcccccccceeE------------CC--E----------EEEeccCCCc------eec
Confidence 2222111110000 00000 00 0 0000112221 011
Q ss_pred cccCceeEEEcCCCCcccceEEEEEeCCC-eEEEEECC---CCe-----EEE--EecCCCCCEEEEEEeCCCCEEEEEeC
Q psy467 274 VSVSRTSLSILPQSPMLCFILTTSSSADR-TVNFWDLE---KFS-----LVS--TTEKNSSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 274 ~~~~I~slafSPdg~~~~~~lLatgs~DG-~I~IWDl~---s~~-----~l~--tl~gh~~~VtslafSpdG~~Lasgs~ 342 (845)
....+..++|+|||+ .|+.+..++ .+..++.. .+. ... ...++.+....++++++|.+.++...
T Consensus 193 ~~~~~~gia~s~dg~-----~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~ 267 (343)
T 2qe8_A 193 PHLGVNGIVLDAENE-----WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLA 267 (343)
T ss_dssp CCCCEEEEEECTTSC-----EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGG
T ss_pred eecccceeEeccCCC-----EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccC
Confidence 112456788888887 666666555 55555532 110 000 11123345677999999998888887
Q ss_pred CC-EEEEEecCCceEEEecC-CCCCeEEEEEc-CCceEEEE
Q psy467 343 EG-LKVYGWEPARQYDAQPM-GWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 343 DG-I~IWDl~tgk~l~tl~~-h~~~VtsVafS-dg~lLaaS 380 (845)
++ |.+||..+++....... +...+++++|. ++++++++
T Consensus 268 ~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 268 HSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp GTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEE
T ss_pred CCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEe
Confidence 88 99999856654333322 24578999998 77766655
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.3e-10 Score=127.23 Aligned_cols=143 Identities=14% Similarity=0.031 Sum_probs=84.5
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC-eE-
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS-IT- 104 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~-V~- 104 (845)
++..+++++.||.|+.||..+|+.+.++.. ..+.+..+..++..+++++.||.|..||..+|+.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567899999999999999999999988875 55666666677778888889999999999999877666533111 10
Q ss_pred EEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEEC
Q psy467 105 SVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDL 184 (845)
Q Consensus 105 ~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl 184 (845)
...+. ++..+++++.++.|+.||..+|+.+..+..+. ...++|++..+++++.|+.++. ||.
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a-------------~d~ 147 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITM-------------YDT 147 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEEC-------------CCS
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEE-------------EEC
Confidence 01111 34577888889999999999999988876543 2455678888999999999999 999
Q ss_pred CCCcc
Q psy467 185 SLVHP 189 (845)
Q Consensus 185 ~tg~~ 189 (845)
.+++.
T Consensus 148 ~tG~~ 152 (369)
T 2hz6_A 148 KTREL 152 (369)
T ss_dssp SSSSC
T ss_pred CCCCE
Confidence 98877
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.4e-08 Score=113.07 Aligned_cols=253 Identities=9% Similarity=-0.022 Sum_probs=162.5
Q ss_pred CCCCEEEEEECC-----CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE----------CCCeEEEEECCCC
Q psy467 68 NGEETLSAGCQS-----GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS----------LDSFIKLWDLRRK 132 (845)
Q Consensus 68 pdg~~LaSgs~D-----GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs----------~DG~I~IWDl~t~ 132 (845)
++++.+++.... +.|.++|..+++.+.++.....+ .++++||+++++++. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 467777666553 69999999999999999865555 899999999888776 3678999999999
Q ss_pred ceEEEEcCC-------CCCeEEEEEecCCCEEEEEeC--CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCC------
Q psy467 133 GCIYTYRGH-------SKSINSIRFSPDGQWIASGGE--DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY------ 197 (845)
Q Consensus 133 ~~l~~~~~h-------~~~V~sLafSPdg~~Lasgs~--DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~------ 197 (845)
+.+..+... ......++|+|||++++++.. ++.|.+ +|+.+++.+..+.-..
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsV-------------ID~~t~kvv~~I~v~g~~~~~p 226 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGV-------------VDLEGKTFDRMLDVPDCYHIFP 226 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEE-------------EETTTTEEEEEEECCSEEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEE-------------EECCCCeEEEEEEcCCceeecc
Confidence 988887532 234567899999999998874 577888 9999888744332111
Q ss_pred ---CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccccc
Q psy467 198 ---TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPV 274 (845)
Q Consensus 198 ---i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~ 274 (845)
...+.++++|+.+..-. .... + .. ... . .+..
T Consensus 227 ~g~~~~v~~~~dG~~~~V~~-~~~~-------v---------------------------~~-~~~---~------~~~v 261 (426)
T 3c75_H 227 ASPTVFYMNCRDGSLARVDF-ADGE-------T---------------------------KV-TNT---E------VFHT 261 (426)
T ss_dssp EETTEEEEEETTSSEEEEEC-CTTC-------C---------------------------EE-EEC---C------CCSC
T ss_pred CCCcEEEEEcCCCCEEEEEC-CCCc-------E---------------------------EE-Eee---e------eecc
Confidence 11122333333221111 0000 0 00 000 0 0000
Q ss_pred -ccC-ceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE--EEecC----------CCCCEEEEEEeCCCCEEEEE
Q psy467 275 -SVS-RTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV--STTEK----------NSSTIRRLTFSEGGECLLGG 340 (845)
Q Consensus 275 -~~~-I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l--~tl~g----------h~~~VtslafSpdG~~Lasg 340 (845)
..+ ...+.+++++. .++..+..+.|.+.|+...... ..+.- .......++++++++.++++
T Consensus 262 ~~~p~~~~~~~~~dg~-----~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 262 EDELLINHPAFSLRSG-----RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp TTSCBCSCCEECTTTC-----EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred CCCceeeEeeecCCCC-----EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 001 12346677776 5555567889999998755422 11110 01122237899999988776
Q ss_pred eC----------CC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCc-eEEEE------EEEEee
Q psy467 341 DT----------EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQ-LWFRR------VGTWSH 386 (845)
Q Consensus 341 s~----------DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~-lLaaS------VsiW~~ 386 (845)
.. .+ |.++|..+.+.+.++... ....+++|+ ||+ +++++ |+++..
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred ecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 42 23 999999999999888643 258899999 888 77766 777654
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.8e-06 Score=94.89 Aligned_cols=284 Identities=11% Similarity=0.011 Sum_probs=165.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCC---------CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGH---------STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h---------~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~ 98 (845)
+..+++++.++.|..||..+++.+...... ...+.+. ...++..+++++.++.|..+|..+|+.+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 467888888999999999999988776542 2223222 222456788888999999999999998877764
Q ss_pred CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCe-----EEEEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 99 HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI-----NSIRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 99 h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V-----~sLafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
........... +..+++++.++.|..+|..+++.+..+....... ...... +..+++++.++.+..
T Consensus 132 ~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~----- 202 (376)
T 3q7m_A 132 AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSA----- 202 (376)
T ss_dssp SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEE-----
T ss_pred CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEE-----
Confidence 43222222222 4578888999999999999999988876432211 122222 456777777888888
Q ss_pred cCCceeEEEECCCCccCCCCCCCC------------CcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQY------------TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~------------i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
+|..+++.+....... +.......++. +.. .....
T Consensus 203 --------~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-v~~-~~~~g----------------------- 249 (376)
T 3q7m_A 203 --------VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGV-VFA-LAYNG----------------------- 249 (376)
T ss_dssp --------EETTTCCEEEEEECCC-----------CCCCCCEEETTE-EEE-ECTTS-----------------------
T ss_pred --------EECCCCcEEEEEecccCCCCcccccccccCCCcEEECCE-EEE-EecCc-----------------------
Confidence 8887776632111000 00000000111 000 00000
Q ss_pred chhhhhhccCCCceeEEEcCC-CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 242 EEELFATIANPCDYSAIFQPH-RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspd-g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
...++++. +...-.. .......+... +. .+..++.++.|..+|..+++.+.....
T Consensus 250 -------------~l~~~d~~tG~~~w~~----~~~~~~~~~~~--~~-----~l~~~~~~g~l~~~d~~tG~~~w~~~~ 305 (376)
T 3q7m_A 250 -------------NLTALDLRSGQIMWKR----ELGSVNDFIVD--GN-----RIYLVDQNDRVMALTIDGGVTLWTQSD 305 (376)
T ss_dssp -------------CEEEEETTTCCEEEEE----CCCCEEEEEEE--TT-----EEEEEETTCCEEEEETTTCCEEEEECT
T ss_pred -------------EEEEEECCCCcEEeec----cCCCCCCceEE--CC-----EEEEEcCCCeEEEEECCCCcEEEeecc
Confidence 11222221 1100000 00112223332 33 677778899999999999998877762
Q ss_pred -CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCe-EEEEEcCCceEEEE
Q psy467 321 -NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKV-QDLAVTGTQLWFRR 380 (845)
Q Consensus 321 -h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~V-tsVafSdg~lLaaS 380 (845)
....+..... .+..|++++.+| |.++|..+++.+.........+ ......++.+++.+
T Consensus 306 ~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~ 366 (376)
T 3q7m_A 306 LLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQA 366 (376)
T ss_dssp TTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEB
T ss_pred cCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEe
Confidence 2222333333 256788889898 9999999999887776533333 22333466655544
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.82 E-value=4.5e-08 Score=104.72 Aligned_cols=250 Identities=13% Similarity=0.085 Sum_probs=145.6
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
.+.++...+ ++. |.+++.+ |..+|. +++.+..+...........+. +..|..++.++.|..+|.. ++.....
T Consensus 61 ~~~~~~~~~-~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~ 132 (330)
T 3hxj_A 61 IECRPSIGK-DGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRF 132 (330)
T ss_dssp EEECCEETT-TTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEE
T ss_pred cccceEEec-CCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEE
Confidence 345556554 443 4444433 777775 444433332222222223333 4566777778888888887 7766666
Q ss_pred cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCC
Q psy467 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN 176 (845)
Q Consensus 97 ~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~ 176 (845)
..+...+.++...+++. ++.++.++.|..+|.. ++.+..+......+.++...+++.+++ ++ +.+..
T Consensus 133 ~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~-------- 199 (330)
T 3hxj_A 133 KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYA-------- 199 (330)
T ss_dssp ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEE--------
T ss_pred cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEE--------
Confidence 55555556666666665 5556777888888887 777666665555566677766666443 33 55666
Q ss_pred ceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCcee
Q psy467 177 TSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYS 256 (845)
Q Consensus 177 ~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (845)
+| .+++. +.......
T Consensus 200 -----~d-~~g~~--------------------~~~~~~~~--------------------------------------- 214 (330)
T 3hxj_A 200 -----IN-PDGTE--------------------KWNFYAGY--------------------------------------- 214 (330)
T ss_dssp -----EC-TTSCE--------------------EEEECCSS---------------------------------------
T ss_pred -----EC-CCCcE--------------------EEEEccCC---------------------------------------
Confidence 66 44443 21111100
Q ss_pred EEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCE
Q psy467 257 AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGEC 336 (845)
Q Consensus 257 l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~ 336 (845)
..+.+++..++|. +..++.++.|..+|. +++.+..+......+.++.+.++|.
T Consensus 215 -------------------~~~~~~~~~~~g~------l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~- 267 (330)
T 3hxj_A 215 -------------------WTVTRPAISEDGT------IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT- 267 (330)
T ss_dssp -------------------CCCSCCEECTTSC------EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-
T ss_pred -------------------cceeceEECCCCe------EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-
Confidence 1123333444443 455666788888874 5666666654444455566666664
Q ss_pred EEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 337 LLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 337 Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
|..++.++ |..+|. +++.+..+......+.++... +|++++.+
T Consensus 268 l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt 312 (330)
T 3hxj_A 268 IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGT 312 (330)
T ss_dssp EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEEC
T ss_pred EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEc
Confidence 55667776 888885 677776666566677788886 77766655
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.82 E-value=8.1e-10 Score=122.78 Aligned_cols=187 Identities=12% Similarity=0.067 Sum_probs=111.7
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCC-eE-
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS-IN- 146 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~-V~- 146 (845)
++..|++++.||.|..||..+|+.+..+.. +.+.+..+..++..+++++.||.|+.||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 578899999999999999999999988875 45655556677777888889999999999998887766533111 10
Q ss_pred EEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceee
Q psy467 147 SIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 147 sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
+..+. ++..+++++.|+.++. ||..+|+. +..+..+.
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a-------------~D~~tG~~--------------------~w~~~~~~--------- 122 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYV-------------IDLLTGEK--------------------QQTLSSAF--------- 122 (369)
T ss_dssp CSCC------CCCCEEEEEEEE-------------ECCC-----------------------------------------
T ss_pred CceEe-cCCEEEEEeCCCEEEE-------------EECCCCcE--------------------EEEecCCC---------
Confidence 01111 3456777888888988 99998887 22211110
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEE
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNF 306 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~I 306 (845)
...++|++. .+++++.|+.|+.
T Consensus 123 -----------------------------~~~~~p~~~-----------------------------~v~~~~~dg~v~a 144 (369)
T 2hz6_A 123 -----------------------------ADSLSPSTS-----------------------------LLYLGRTEYTITM 144 (369)
T ss_dssp --------------------------------------------------------------------EEEEEEEEEEEC
T ss_pred -----------------------------cccccccCC-----------------------------EEEEEecCCEEEE
Confidence 001122333 7888888999999
Q ss_pred EECCCCeEEEEecCCCCCEEEEEEeCCC---CEEEEEeCCC-EEEEEecCCceEEEec
Q psy467 307 WDLEKFSLVSTTEKNSSTIRRLTFSEGG---ECLLGGDTEG-LKVYGWEPARQYDAQP 360 (845)
Q Consensus 307 WDl~s~~~l~tl~gh~~~VtslafSpdG---~~Lasgs~DG-I~IWDl~tgk~l~tl~ 360 (845)
||..+++.+..+..+. ....+++.++ ..+++++.++ |+.||..+|+.+-...
T Consensus 145 ~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 145 YDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp CCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred EECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 9999998766554221 1223334432 4577788888 9999999998876665
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.81 E-value=3.5e-07 Score=109.80 Aligned_cols=133 Identities=13% Similarity=0.127 Sum_probs=92.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCC-----------eEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP-----------VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~-----------V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
+..|++++.++.|.-+|..+|+.+.++...... ...+++ ++..|++++.|+.|..+|..+|+.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 356777777889999999999999887643210 112233 4568888889999999999999999888
Q ss_pred cCC-C----CCeEE-EEEccCCCEEEEEEC------CCeEEEEECCCCceEEEEcCCCCC--------------------
Q psy467 97 NGH-K----SSITS-VDFHPYGDYLCSGSL------DSFIKLWDLRRKGCIYTYRGHSKS-------------------- 144 (845)
Q Consensus 97 ~~h-~----~~V~~-lafspdg~~Lasgs~------DG~I~IWDl~t~~~l~~~~~h~~~-------------------- 144 (845)
..+ . ..+.. ... .+..+++++. +|.|+.||..+++.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred cCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 754 2 11211 111 2345555553 689999999999999887643211
Q ss_pred ------------eEEEEEecCCCEEEEEeCCC
Q psy467 145 ------------INSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 145 ------------V~sLafSPdg~~Lasgs~DG 164 (845)
...++++|++..++.+..++
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~ 264 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNG 264 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCE
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCC
Confidence 12467888888888777654
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.4e-06 Score=98.37 Aligned_cols=224 Identities=13% Similarity=0.096 Sum_probs=144.9
Q ss_pred CCCCEEEEEE-CCCcEEEEECCCC----cEEEEEc-------CCCCCeEEEEEccCCCEEEEEECC------CeEEEEEC
Q psy467 68 NGEETLSAGC-QSGSIKIWNLAVP----TVQRTLN-------GHKSSITSVDFHPYGDYLCSGSLD------SFIKLWDL 129 (845)
Q Consensus 68 pdg~~LaSgs-~DGtV~VWDl~tg----~~v~~l~-------~h~~~V~~lafspdg~~Lasgs~D------G~I~IWDl 129 (845)
.++++|++.+ .++.|.++|+.+. +.++++. .....-..+..+|+| .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7788877654 5789999999765 6667773 111234567888999 66665544 78999999
Q ss_pred CCCceEEEEcCCCC---CeEEEEEecCCCEEEEEe-------------------CCCcEEEeeeeccCCceeEEEECCCC
Q psy467 130 RRKGCIYTYRGHSK---SINSIRFSPDGQWIASGG-------------------EDGVVRIGASFHLTNTSIHVVDLSLV 187 (845)
Q Consensus 130 ~t~~~l~~~~~h~~---~V~sLafSPdg~~Lasgs-------------------~DG~I~I~~~~~~~~~~I~vWDl~tg 187 (845)
.+++.+.++..... --..+.|+|+++.+++.. .+..|.+ ||+.++
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v-------------~D~~~~ 238 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHF-------------WDLRKR 238 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEE-------------EETTTT
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEE-------------EECCCC
Confidence 99999998863322 234578899999888874 2456666 999876
Q ss_pred ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeE--EEcCCCCc
Q psy467 188 HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSA--IFQPHRSL 265 (845)
Q Consensus 188 ~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l--~fspdg~~ 265 (845)
+. +..+...... .. - ..+ +++|+++
T Consensus 239 k~--------------------~~tI~vg~~g--~~---P---------------------------~~i~f~~~Pdg~- 265 (462)
T 2ece_A 239 KR--------------------IHSLTLGEEN--RM---A---------------------------LELRPLHDPTKL- 265 (462)
T ss_dssp EE--------------------EEEEESCTTE--EE---E---------------------------EEEEECSSTTCC-
T ss_pred cE--------------------eeEEecCCCC--Cc---c---------------------------ceeEeeECCCCC-
Confidence 65 4443322110 00 0 122 2255554
Q ss_pred CCCCcccccccCceeEEEcCCCCcccceEEEEEe------CCCeEEEEECCCCe--EEEEe--cCC--------------
Q psy467 266 NRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS------ADRTVNFWDLEKFS--LVSTT--EKN-------------- 321 (845)
Q Consensus 266 ~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs------~DG~I~IWDl~s~~--~l~tl--~gh-------------- 321 (845)
++.+++ .+++|.+|..+.++ ..+.+ ...
T Consensus 266 ----------------------------~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~ 317 (462)
T 2ece_A 266 ----------------------------MGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFK 317 (462)
T ss_dssp ----------------------------EEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGT
T ss_pred ----------------------------EEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccc
Confidence 444443 56688777665443 12221 110
Q ss_pred --CCCEEEEEEeCCCCEEEEEeCCC--EEEEEecC---CceEEEecCCC--------------CCeEEEEEc-CCceEEE
Q psy467 322 --SSTIRRLTFSEGGECLLGGDTEG--LKVYGWEP---ARQYDAQPMGW--------------GKVQDLAVT-GTQLWFR 379 (845)
Q Consensus 322 --~~~VtslafSpdG~~Lasgs~DG--I~IWDl~t---gk~l~tl~~h~--------------~~VtsVafS-dg~lLaa 379 (845)
......+.+|+||++|.++.... |.+||+.. .+.+..+.... +..+.++++ ||++|.+
T Consensus 318 ~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyV 397 (462)
T 2ece_A 318 AVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYV 397 (462)
T ss_dssp EECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEE
T ss_pred cCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEE
Confidence 23578899999999999998766 99999863 34555554321 246899999 9999988
Q ss_pred E---EEEEee
Q psy467 380 R---VGTWSH 386 (845)
Q Consensus 380 S---VsiW~~ 386 (845)
+ .+-|..
T Consensus 398 aNsl~~~wd~ 407 (462)
T 2ece_A 398 TNSLYSTWDN 407 (462)
T ss_dssp ECCCCHHHHH
T ss_pred EcCCcccccc
Confidence 8 456643
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.7e-06 Score=97.80 Aligned_cols=142 Identities=12% Similarity=0.107 Sum_probs=102.1
Q ss_pred cCCCCEEEE-EeCCCeEEEEECCCC----eeEEEec------C-CCCCeEEEEEcCCCCEEEEEECC------CcEEEEE
Q psy467 25 KKSGQVLAT-GGDDKKVNLWALGKS----NCIMSLS------G-HSTPVESVQFGNGEETLSAGCQS------GSIKIWN 86 (845)
Q Consensus 25 p~dg~~LaT-gs~DG~I~IWdl~t~----~~i~~l~------~-h~~~V~sLafSpdg~~LaSgs~D------GtV~VWD 86 (845)
+ ++++|++ +..+++|.++|+.+. +..+++. . ....-..+..+|+| .++++..+ |.|.+.|
T Consensus 93 ~-~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 I-ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp C-CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred c-cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 5 5666665 556789999998755 6666663 1 11245567788999 66665544 7899999
Q ss_pred CCCCcEEEEEcCCCCC---eEEEEEccCCCEEEEEE-------------------CCCeEEEEECCCCceEEEEcCCC--
Q psy467 87 LAVPTVQRTLNGHKSS---ITSVDFHPYGDYLCSGS-------------------LDSFIKLWDLRRKGCIYTYRGHS-- 142 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~---V~~lafspdg~~Lasgs-------------------~DG~I~IWDl~t~~~l~~~~~h~-- 142 (845)
.++++.+.++.....+ -..+.|+|+++.+++.. .+..|.+||+.+++.+.++....
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 9999999998633222 33578899999888875 36899999999988888876531
Q ss_pred CCeEEEEE--ecCCCEEEEEeC------CCcEEE
Q psy467 143 KSINSIRF--SPDGQWIASGGE------DGVVRI 168 (845)
Q Consensus 143 ~~V~sLaf--SPdg~~Lasgs~------DG~I~I 168 (845)
.....+.| +|++++++++++ +++|.+
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v 284 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWL 284 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEE
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEE
Confidence 24556666 999999887764 456666
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.78 E-value=9.8e-06 Score=84.70 Aligned_cols=151 Identities=9% Similarity=-0.035 Sum_probs=100.2
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~ 95 (845)
.+.+++|+++++.++++-..++.|..++.........+.........+++++++..|+.+. ..+.|.+++++.......
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 4678999984455555555678999999876554443433335789999999766665554 467899999875433333
Q ss_pred EcCCCCCeEEEEEccCCCEEEEEEC---CCeEEEEECCCCceEEEE-cCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 96 LNGHKSSITSVDFHPYGDYLCSGSL---DSFIKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 96 l~~h~~~V~~lafspdg~~Lasgs~---DG~I~IWDl~t~~~l~~~-~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
..........++++|++..|+.+.. .+.|..+++... ....+ ...-.....+++++++..|+.+. ..+.|..
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 3322345789999997777666654 368888888643 22222 22334678999999877665554 4567777
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.76 E-value=4.9e-07 Score=105.34 Aligned_cols=291 Identities=11% Similarity=0.111 Sum_probs=178.3
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecC---------------------------------CC------CCeEEEEEcC--
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSG---------------------------------HS------TPVESVQFGN-- 68 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~---------------------------------h~------~~V~sLafSp-- 68 (845)
.+.+|+..|.++|+-+.+++.++.+.- +. +.......|.
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~ 96 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 96 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence 356788899999999998888777631 01 1122344444
Q ss_pred ---CCCEEEEEEC-CCcEEEEECCCCcEEEEEcC-CCCCeEEEEE-c-cCCCEEEEEE------------------CCCe
Q psy467 69 ---GEETLSAGCQ-SGSIKIWNLAVPTVQRTLNG-HKSSITSVDF-H-PYGDYLCSGS------------------LDSF 123 (845)
Q Consensus 69 ---dg~~LaSgs~-DGtV~VWDl~tg~~v~~l~~-h~~~V~~laf-s-pdg~~Lasgs------------------~DG~ 123 (845)
||++|+.... ++.|.+.|+++.++...+.- .......+++ + |+++++++++ .++.
T Consensus 97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 7888887766 45699999999998885432 2345788888 5 9999998885 2457
Q ss_pred EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe--eeeccCCceeEEEECCCCccCCCCCCCCCcce
Q psy467 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG--ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSV 201 (845)
Q Consensus 124 I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~--~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~sv 201 (845)
+.++|..+.+...++.-.. ....++++|||+++++.+.+..--.+ ..-......+.+.|.....
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~------------- 242 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE------------- 242 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH-------------
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee-------------
Confidence 9999999999888876433 46778999999999988866411000 0000000112225543221
Q ss_pred eecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeE
Q psy467 202 PFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSL 281 (845)
Q Consensus 202 s~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sl 281 (845)
.+.++|+.... .. +.|.+...... . ..+. .++......++
T Consensus 243 ~~v~~Gk~~~i-----~~-----V~VID~~~~~~--------~----------~~~~------------~Ipvg~~PhGv 282 (595)
T 1fwx_A 243 KAIAAGDYQEL-----NG-----VKVVDGRKEAS--------S----------LFTR------------YIPIANNPHGC 282 (595)
T ss_dssp HHHHHTCSEEE-----TT-----EEEEECSGGGC--------C----------SSEE------------EEEEESSCCCE
T ss_pred EeccCCCeeEE-----Cc-----EEEEeCcccCC--------c----------eeEE------------EEecCCCceEE
Confidence 12233332221 11 11211110000 0 0001 11222344577
Q ss_pred EEcCCCCcccceEEEEEeCCCeEEEEECCCCe------------EEEEecCCCCCEEEEEEeCCCCEEEE-EeCCC-EEE
Q psy467 282 SILPQSPMLCFILTTSSSADRTVNFWDLEKFS------------LVSTTEKNSSTIRRLTFSEGGECLLG-GDTEG-LKV 347 (845)
Q Consensus 282 afSPdg~~~~~~lLatgs~DG~I~IWDl~s~~------------~l~tl~gh~~~VtslafSpdG~~Las-gs~DG-I~I 347 (845)
.++|||+. +++++..+.+|.++|+.+.+ .+..+.. ......++|+++| ++++ ...++ |.+
T Consensus 283 ~~sPDGk~----v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG-~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 283 NMAPDKKH----LCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRG-NAYTSLFLDSQVVK 356 (595)
T ss_dssp EECTTSSE----EEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTS-EEEEEETTTTEEEE
T ss_pred EEcCCCCE----EEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCC-eEEEEEecCCcEEE
Confidence 88888883 56666678999999998653 3444442 3468999999999 5554 44566 999
Q ss_pred EEecC----------CceEEEecCCCCCe-E----EEEEc-CCceEEEE
Q psy467 348 YGWEP----------ARQYDAQPMGWGKV-Q----DLAVT-GTQLWFRR 380 (845)
Q Consensus 348 WDl~t----------gk~l~tl~~h~~~V-t----sVafS-dg~lLaaS 380 (845)
||+++ .+.+..+..|..+- . ++.++ ||++|.++
T Consensus 357 wdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 357 WNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp EEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred EEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 99987 56777887775432 1 12335 89988766
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.4e-07 Score=109.97 Aligned_cols=229 Identities=12% Similarity=0.074 Sum_probs=153.5
Q ss_pred CCCEEEEEeC-CCeEEEEECCCCeeEEEecC-CCCCeEEEEE-c-CCCCEEEEEE------------------CCCcEEE
Q psy467 27 SGQVLATGGD-DKKVNLWALGKSNCIMSLSG-HSTPVESVQF-G-NGEETLSAGC------------------QSGSIKI 84 (845)
Q Consensus 27 dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~~-h~~~V~sLaf-S-pdg~~LaSgs------------------~DGtV~V 84 (845)
+|+++++... ++.|.+.|+.+.++...+.- .......+++ + |++.++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 5667766654 56799999999998885532 2356889998 5 9999998885 2467999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC--------------------------------------eEEE
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS--------------------------------------FIKL 126 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG--------------------------------------~I~I 126 (845)
+|.++.+...++.... .-..++++|+|+++++.+.+. .|.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999999988887433 456788999999999888553 3667
Q ss_pred EECCC--Cce-EEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCccee
Q psy467 127 WDLRR--KGC-IYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202 (845)
Q Consensus 127 WDl~t--~~~-l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs 202 (845)
.|..+ ++. +..+.. .....++.++|||+++++++ .+.+|.+ +|+.+.+....- .
T Consensus 259 ID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsV-------------id~~~~~~~~~~--------~ 316 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTV-------------LDVTRFDAVFYE--------N 316 (595)
T ss_dssp EECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEE-------------EEGGGHHHHHHS--------C
T ss_pred EeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEE-------------EECccccccccc--------c
Confidence 77766 444 444432 23567899999999877665 5678888 998854320000 0
Q ss_pred ecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE
Q psy467 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282 (845)
Q Consensus 203 ~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla 282 (845)
+.+........ + .......++
T Consensus 317 l~~~~~v~~~v-----------------------------------------------~------------vG~gP~h~a 337 (595)
T 1fwx_A 317 ADPRSAVVAEP-----------------------------------------------E------------LGLGPLHTA 337 (595)
T ss_dssp CCGGGGEEECC-----------------------------------------------B------------CCSCEEEEE
T ss_pred cCcccceEEEc-----------------------------------------------C------------CCCCcceEE
Confidence 00000001111 1 112334556
Q ss_pred EcCCCCcccceEEEEEeCCCeEEEEECCC----------CeEEEEecCCCCCE-----EEEEEeCCCCEEEEEeC
Q psy467 283 ILPQSPMLCFILTTSSSADRTVNFWDLEK----------FSLVSTTEKNSSTI-----RRLTFSEGGECLLGGDT 342 (845)
Q Consensus 283 fSPdg~~~~~~lLatgs~DG~I~IWDl~s----------~~~l~tl~gh~~~V-----tslafSpdG~~Lasgs~ 342 (845)
|+|+|. ..++..-|+.|.+||+.+ .+.+.++..|-.+- ..+.++|||++|+++..
T Consensus 338 F~~dG~-----aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 338 FDGRGN-----AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp ECTTSE-----EEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred ECCCCe-----EEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 666663 778888999999999977 56777887664322 12245799999999865
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.4e-05 Score=83.57 Aligned_cols=245 Identities=9% Similarity=-0.021 Sum_probs=147.0
Q ss_pred CEEEEEeCCCeEEEEECCCCee-----EEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEEEcCCCCC
Q psy467 29 QVLATGGDDKKVNLWALGKSNC-----IMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRTLNGHKSS 102 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~-----i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~l~~h~~~ 102 (845)
.+|+.+.. +.|+.+++..... ...+......+..++|++++..|+.+. ..+.|..++.........+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 45555553 4788888765432 111221224578999999776666554 4689999999866544444433356
Q ss_pred eEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC---CCcEEEeeeeccCCce
Q psy467 103 ITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE---DGVVRIGASFHLTNTS 178 (845)
Q Consensus 103 V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~---DG~I~I~~~~~~~~~~ 178 (845)
...+++++++..|+.+. ..+.|.++++..................++++|++..|+.+.. .+.|..
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~---------- 150 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIET---------- 150 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEE----------
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEE----------
Confidence 78999999776666554 5678999998643322222222246789999997666655543 245555
Q ss_pred eEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEE
Q psy467 179 IHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAI 258 (845)
Q Consensus 179 I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 258 (845)
+++..... ..+... . +
T Consensus 151 ---~~~dg~~~---------------------~~~~~~--~-------~------------------------------- 166 (267)
T 1npe_A 151 ---SHMDGTNR---------------------RILAQD--N-------L------------------------------- 166 (267)
T ss_dssp ---EETTSCCC---------------------EEEECT--T-------C-------------------------------
T ss_pred ---EecCCCCc---------------------EEEEEC--C-------C-------------------------------
Confidence 55532111 111000 0 0
Q ss_pred EcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEE
Q psy467 259 FQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL 338 (845)
Q Consensus 259 fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~La 338 (845)
.....+++++++.. ++++....+.|.++|.........+.+ ......++.. +..|+
T Consensus 167 -----------------~~P~gia~d~~~~~----lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~ly 222 (267)
T 1npe_A 167 -----------------GLPNGLTFDAFSSQ----LCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLY 222 (267)
T ss_dssp -----------------SCEEEEEEETTTTE----EEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEE
T ss_pred -----------------CCCcEEEEcCCCCE----EEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEE
Confidence 11233444444331 556666678999999986544444433 2344667654 55666
Q ss_pred EEeCC-C-EEEEEecCCceEEEecCCC-CCeEEEEEc
Q psy467 339 GGDTE-G-LKVYGWEPARQYDAQPMGW-GKVQDLAVT 372 (845)
Q Consensus 339 sgs~D-G-I~IWDl~tgk~l~tl~~h~-~~VtsVafS 372 (845)
.+..+ + |.++|..+++.+.++.... ....++++.
T Consensus 223 va~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~ 259 (267)
T 1npe_A 223 YTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIA 259 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEE
T ss_pred EEECCCCeEEEEeCCCCCceEEEccccccccceeeec
Confidence 66654 4 9999999999888886543 347778777
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.75 E-value=9e-07 Score=94.49 Aligned_cols=217 Identities=12% Similarity=0.043 Sum_probs=147.9
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVD 107 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~la 107 (845)
+..+.+++.++.|..+|.. ++.......+...+.++...+++. |..++.++.|..+|.. ++....+......+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 3567778888999999988 777777665666677777777776 5567778999999999 887777765566677788
Q ss_pred EccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC
Q psy467 108 FHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV 187 (845)
Q Consensus 108 fspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg 187 (845)
..+++..++ ++ +.|..+| .+++.+..+......+.++...++|. +.+++.++.+.. +|. ++
T Consensus 184 ~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~-------------~~~-~g 244 (330)
T 3hxj_A 184 IGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYA-------------INP-DG 244 (330)
T ss_dssp ECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEE-------------ECT-TS
T ss_pred EcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEE-------------ECC-CC
Confidence 877776444 44 7899999 77888777776666788888888776 455666777777 653 33
Q ss_pred ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCC
Q psy467 188 HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNR 267 (845)
Q Consensus 188 ~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~ 267 (845)
.. +..+...... + ..+.+..++
T Consensus 245 ~~--------------------~~~~~~~~~~-------~---------------------------~~~~~~~~g---- 266 (330)
T 3hxj_A 245 TE--------------------KWRFKTGKRI-------E---------------------------SSPVIGNTD---- 266 (330)
T ss_dssp CE--------------------EEEEECSSCC-------C---------------------------SCCEECTTS----
T ss_pred CE--------------------eEEeeCCCCc-------c---------------------------ccceEcCCC----
Confidence 33 2221111110 0 112222222
Q ss_pred CCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EE
Q psy467 268 SGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LK 346 (845)
Q Consensus 268 ~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~ 346 (845)
.|..++.+|.|..+|. +++.+..+......+.++..+++|. |..++.+| ++
T Consensus 267 --------------------------~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~ 318 (330)
T 3hxj_A 267 --------------------------TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFY 318 (330)
T ss_dssp --------------------------CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEE
T ss_pred --------------------------eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEE
Confidence 3667778889999996 6777777665556678888888886 45577888 77
Q ss_pred EEEecC
Q psy467 347 VYGWEP 352 (845)
Q Consensus 347 IWDl~t 352 (845)
+...+.
T Consensus 319 ~~~~~~ 324 (330)
T 3hxj_A 319 ALFNLE 324 (330)
T ss_dssp EEEC--
T ss_pred EEeccc
Confidence 766543
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-06 Score=105.48 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=75.2
Q ss_pred CCeEEEEECCCCeeEEEecCC--C-----------------------------CCeEEEEEcCCCCEEEEEECCCc----
Q psy467 37 DKKVNLWALGKSNCIMSLSGH--S-----------------------------TPVESVQFGNGEETLSAGCQSGS---- 81 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h--~-----------------------------~~V~sLafSpdg~~LaSgs~DGt---- 81 (845)
+|.|..||..+|+.+.++... . ..-..+++++++..|+.++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 689999999999998877521 0 01125788898899998877763
Q ss_pred ---------------EEEEECCCCcEEEEEcC--CC-------CCeEEEEEccCCC---EEEEEECCCeEEEEECCCCce
Q psy467 82 ---------------IKIWNLAVPTVQRTLNG--HK-------SSITSVDFHPYGD---YLCSGSLDSFIKLWDLRRKGC 134 (845)
Q Consensus 82 ---------------V~VWDl~tg~~v~~l~~--h~-------~~V~~lafspdg~---~Lasgs~DG~I~IWDl~t~~~ 134 (845)
|..||.++|+.+..++. |. .+........+|+ .++.++.+|.++++|..+++.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 99999999999988764 21 1222223333564 788999999999999999998
Q ss_pred EEEE
Q psy467 135 IYTY 138 (845)
Q Consensus 135 l~~~ 138 (845)
+...
T Consensus 342 l~~~ 345 (689)
T 1yiq_A 342 LSAK 345 (689)
T ss_dssp EEEE
T ss_pred eccc
Confidence 8544
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.65 E-value=5.3e-06 Score=91.02 Aligned_cols=257 Identities=11% Similarity=0.045 Sum_probs=145.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCe---
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI--- 103 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V--- 103 (845)
++..+++++.++.|..+|..+++.+................ +..+++++.++.|..+|..+|+.+..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec
Confidence 34678888899999999999999887776443222222222 4578888889999999999999888776432211
Q ss_pred --EEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCC----eE---EEEEec--CCCEEEEEeCCCcEEEeeee
Q psy467 104 --TSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS----IN---SIRFSP--DGQWIASGGEDGVVRIGASF 172 (845)
Q Consensus 104 --~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~----V~---sLafSP--dg~~Lasgs~DG~I~I~~~~ 172 (845)
...... +..+++++.++.|..+|..+++.+......... +. .+...| .+..+++++.++.+..
T Consensus 180 ~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~---- 253 (376)
T 3q7m_A 180 GESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTA---- 253 (376)
T ss_dssp CCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEE----
T ss_pred CCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEE----
Confidence 112222 457888888999999999999988777532110 00 011111 2466777778888888
Q ss_pred ccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCC
Q psy467 173 HLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANP 252 (845)
Q Consensus 173 ~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~ 252 (845)
+|..+++.+..........+... +..+.... .... +
T Consensus 254 ---------~d~~tG~~~w~~~~~~~~~~~~~--~~~l~~~~-~~g~-------l------------------------- 289 (376)
T 3q7m_A 254 ---------LDLRSGQIMWKRELGSVNDFIVD--GNRIYLVD-QNDR-------V------------------------- 289 (376)
T ss_dssp ---------EETTTCCEEEEECCCCEEEEEEE--TTEEEEEE-TTCC-------E-------------------------
T ss_pred ---------EECCCCcEEeeccCCCCCCceEE--CCEEEEEc-CCCe-------E-------------------------
Confidence 88887776322211111111111 11111111 0111 1
Q ss_pred CceeEEEcCC-CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE-EEE
Q psy467 253 CDYSAIFQPH-RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR-LTF 330 (845)
Q Consensus 253 ~~~~l~fspd-g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts-laf 330 (845)
.++++. +...-..... ........... +. .|++++.+|.++++|..+++.+.........+.+ ...
T Consensus 290 ----~~~d~~tG~~~w~~~~~-~~~~~~~~~~~--~~-----~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~ 357 (376)
T 3q7m_A 290 ----MALTIDGGVTLWTQSDL-LHRLLTSPVLY--NG-----NLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA 357 (376)
T ss_dssp ----EEEETTTCCEEEEECTT-TTSCCCCCEEE--TT-----EEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE
T ss_pred ----EEEECCCCcEEEeeccc-CCCcccCCEEE--CC-----EEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE
Confidence 112211 1100000000 00111122222 22 6888889999999999999998877753333322 222
Q ss_pred eCCCCEEEEEeCCC-EEEEE
Q psy467 331 SEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 331 SpdG~~Lasgs~DG-I~IWD 349 (845)
.+..|++++.+| |..|+
T Consensus 358 --~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 358 --ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp --ETTEEEEEBTTSCEEEEE
T ss_pred --ECCEEEEEeCCCEEEEEe
Confidence 245778888888 88876
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.63 E-value=6.9e-06 Score=98.40 Aligned_cols=150 Identities=13% Similarity=0.137 Sum_probs=103.1
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCC-CeEEEEEcC--CCCEEEEEEC------CCcEEEEECCCCcEEEEEcC
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHST-PVESVQFGN--GEETLSAGCQ------SGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~-~V~sLafSp--dg~~LaSgs~------DGtV~VWDl~tg~~v~~l~~ 98 (845)
+..+++++.|+.|..+|..+|+.+.++..... ....+..+| .+..+++++. +|.|..+|..+|+.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 45688888899999999999999887764211 000011111 1345555543 58999999999999988752
Q ss_pred CC---C----------------------------CeEEEEEccCCCEEEEEECCC-------------------eEEEEE
Q psy467 99 HK---S----------------------------SITSVDFHPYGDYLCSGSLDS-------------------FIKLWD 128 (845)
Q Consensus 99 h~---~----------------------------~V~~lafspdg~~Lasgs~DG-------------------~I~IWD 128 (845)
.. . ....+++.+++..++.++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 11 0 012467888888888887766 499999
Q ss_pred CCCCceEEEEcCC--C-------CCeEEEEEecCCC---EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 129 LRRKGCIYTYRGH--S-------KSINSIRFSPDGQ---WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 129 l~t~~~l~~~~~h--~-------~~V~sLafSPdg~---~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
..+++.+..+... . .+.....+..+|+ .++.++.+|.+++ +|..+|+.+
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~-------------lD~~tG~~l 337 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYV-------------LDRTNGKLI 337 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEE-------------EETTTCCEE
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEE-------------EECCCCCEe
Confidence 9999999888642 1 2233333334665 6888889999999 999999873
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-05 Score=85.49 Aligned_cols=208 Identities=9% Similarity=0.063 Sum_probs=136.3
Q ss_pred eeEEEecCCCC--CeEEEEEcCCCCEEEEEEC--CCcEEEEECCCCcEEEEEcCCCC-CeEEEEEccCCCEEEEEE-CCC
Q psy467 49 NCIMSLSGHST--PVESVQFGNGEETLSAGCQ--SGSIKIWNLAVPTVQRTLNGHKS-SITSVDFHPYGDYLCSGS-LDS 122 (845)
Q Consensus 49 ~~i~~l~~h~~--~V~sLafSpdg~~LaSgs~--DGtV~VWDl~tg~~v~~l~~h~~-~V~~lafspdg~~Lasgs-~DG 122 (845)
+.+.++. |.. ....++|++++...++.+. ++.|.++|+.+++.+..+..... ....+++. ++.|+.+. .++
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 4455554 443 4689999998654444443 58999999999999988753222 22345554 55565554 678
Q ss_pred eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCccee
Q psy467 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202 (845)
Q Consensus 123 ~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs 202 (845)
.+.++|..+.+.+.++..... ....+++||+.++++..++.+.+ +|..+.+.
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~v-------------iD~~t~~v------------- 138 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYE-------------IDPHTFKL------------- 138 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEE-------------ECTTTCCE-------------
T ss_pred EEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEE-------------EECCCCcE-------------
Confidence 999999999999988863312 22446667887777777788888 99888776
Q ss_pred ecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE
Q psy467 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282 (845)
Q Consensus 203 ~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla 282 (845)
+..+.-.... .. + .....+.|. ++.
T Consensus 139 -------~~~I~Vg~~~---~p--~------------------------~~~nele~~-dg~------------------ 163 (266)
T 2iwa_A 139 -------IKKHNVKYNG---HR--V------------------------IRLNELEYI-NGE------------------ 163 (266)
T ss_dssp -------EEEEECEETT---EE--C------------------------CCEEEEEEE-TTE------------------
T ss_pred -------EEEEEECCCC---cc--c------------------------ccceeEEEE-CCE------------------
Confidence 3333211110 00 0 000233343 333
Q ss_pred EcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC-------------CCCEEEEEEeCCCCEEEEEeCC-C-EEE
Q psy467 283 ILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN-------------SSTIRRLTFSEGGECLLGGDTE-G-LKV 347 (845)
Q Consensus 283 fSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh-------------~~~VtslafSpdG~~Lasgs~D-G-I~I 347 (845)
+++....++.|.+.|..+++.+.++.-. ....+.++|+|+++.+++++.. . +.+
T Consensus 164 -----------lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 164 -----------VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFE 232 (266)
T ss_dssp -----------EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred -----------EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEE
Confidence 6666666889999999999998888631 1356899999998877766654 4 777
Q ss_pred EEecCC
Q psy467 348 YGWEPA 353 (845)
Q Consensus 348 WDl~tg 353 (845)
.++...
T Consensus 233 i~l~~~ 238 (266)
T 2iwa_A 233 IKLHLV 238 (266)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 777653
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.60 E-value=4.9e-07 Score=100.52 Aligned_cols=259 Identities=11% Similarity=-0.023 Sum_probs=155.4
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEe----------CCCeEEEEECCCCeeEEEecCC-------CCCeEEEEEcCCC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGG----------DDKKVNLWALGKSNCIMSLSGH-------STPVESVQFGNGE 70 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs----------~DG~I~IWdl~t~~~i~~l~~h-------~~~V~sLafSpdg 70 (845)
+.++..-..+ .++++| ++++++++. .++.|.+||..+++.+.++.-. ......++++|||
T Consensus 59 ~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDG 135 (368)
T 1mda_H 59 LGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS 135 (368)
T ss_dssp EEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTS
T ss_pred EEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCC
Confidence 3455444445 799999 888888775 3678999999999999988633 1345689999999
Q ss_pred CEEEEEEC--CCcEEE--EECCCCcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCC-----CceEEE---
Q psy467 71 ETLSAGCQ--SGSIKI--WNLAVPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRR-----KGCIYT--- 137 (845)
Q Consensus 71 ~~LaSgs~--DGtV~V--WDl~tg~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t-----~~~l~~--- 137 (845)
++++++.. +..|.+ +|..+ +..+... +. ..+.|++ ..+++.+.||.+.+.|+.+ ++....
T Consensus 136 k~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~ 208 (368)
T 1mda_H 136 ACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG 208 (368)
T ss_dssp SCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCT
T ss_pred CEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeee
Confidence 99998875 467888 99887 4555421 11 2234544 3556667788888888876 332211
Q ss_pred -EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCc--cCCCC------------CCCCCccee
Q psy467 138 -YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVH--PLGTP------------PPQYTSSVP 202 (845)
Q Consensus 138 -~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~--~l~~~------------~~~~i~svs 202 (845)
+.....+. . ++++..++..+. +.+.+ .|..+.. .+... .+.....+.
T Consensus 209 ~i~vg~~P~---~-~~~~~~~~~vs~-~~V~v-------------iD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 209 AQNCSSQAA---Q-ANYPGMLVWAVA-SSILQ-------------GDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp TSCBCSCCE---E-ETTTTEEEECBS-SCCEE-------------EECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred eeeCCCCcc---c-cccCCEEEEEcC-CEEEE-------------EECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 11112232 3 666666665556 77877 7775432 11111 012223377
Q ss_pred ecCCCCeEEEEec-C-C-CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCce
Q psy467 203 FSHNTSLRKSFTK-G-R-PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRT 279 (845)
Q Consensus 203 ~spdg~~l~~~~~-h-~-~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~ 279 (845)
++++++.+..... . . ....... + ..++.... +....+.......
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~--~-----------------------------~ViD~~t~--~vv~~i~vg~~p~ 317 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAEN--T-----------------------------SSVTASVG--QTSGPISNGHDSD 317 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEE--E-----------------------------EEEESSSC--CEEECCEEEEEEC
T ss_pred EcCCCCEEEEEeccccCcccccCCC--E-----------------------------EEEECCCC--eEEEEEECCCCcc
Confidence 8999887665322 1 1 0000000 1 12222111 0011122233467
Q ss_pred eEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCeEEEEecCCCCCEEEEEEeC
Q psy467 280 SLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE 332 (845)
Q Consensus 280 slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp 332 (845)
.++|+|||+. ++++.. .++.|.++|+.+++.+.++..... ...+++.+
T Consensus 318 gi~~s~Dg~~----l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 318 AIIAAQDGAS----DNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEEECCSSSC----EEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred eEEECCCCCE----EEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 8888888874 566666 599999999999999999986433 34555543
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=0.00015 Score=88.28 Aligned_cols=312 Identities=11% Similarity=0.085 Sum_probs=180.4
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCC-CCC-eEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGH-STP-VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h-~~~-V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
|.++...+ +|.+.+ ++. +.|..|+..+++.......+ ... |.++...+++.+. .++.++.|..|+..+++....
T Consensus 133 i~~i~~d~-~g~lwi-~t~-~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~ 208 (795)
T 4a2l_A 133 VNGIEEIS-PEQLLI-STP-EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIY-IGTSTDGLYTYSITQKTFEKV 208 (795)
T ss_dssp CCEEEEEE-TTEEEE-EET-TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEE-EEESSSCEEEEETTTCCEEEC
T ss_pred EEEEEECC-CCCEEE-EEC-CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEE-EEECCCCEEEEeCCCCeEEEe
Confidence 88888877 666554 444 45889998766543211111 123 8888888877644 466665699999887765432
Q ss_pred E-cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-------CCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 96 L-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-------HSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 96 l-~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-------h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
. ......|.++...+++. |..|+.++-|..||..+++....... ....|.++...++|.+.+ |+.+| +.
T Consensus 209 ~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~ 285 (795)
T 4a2l_A 209 IPILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFND-LN 285 (795)
T ss_dssp C----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESSC-EE
T ss_pred cCCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCCh-hh
Confidence 1 12345688888887775 44555444488999877654432221 135689999998887554 44554 66
Q ss_pred EeeeeccCCceeEEEECCCCccC---------CCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPL---------GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l---------~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+ ||..++... ..+....+.++...++|.+-... ...+ +..+.....
T Consensus 286 ~-------------~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt--~~~G-------l~~~~~~~~--- 340 (795)
T 4a2l_A 286 I-------------YHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGT--YFGG-------LNYYHPIRN--- 340 (795)
T ss_dssp E-------------EETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEE--SSSC-------EEEECGGGG---
T ss_pred e-------------EcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEE--CCCC-------eEEeCCCcc---
Confidence 6 665544321 11123345555555555532211 1111 211110000
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT 318 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl 318 (845)
....+..... ........|.+++..++|. |-.|+.++-|..||..++......
T Consensus 341 ----------------~~~~~~~~~~-----~~~l~~~~V~~i~~d~~g~------lWiGt~~~Gl~~~~~~~~~~~~~~ 393 (795)
T 4a2l_A 341 ----------------RFKNIRNIPY-----KNSLSDNVVSCIVEDKDKN------LWIGTNDGGLNLYNPITQRFTSYT 393 (795)
T ss_dssp ----------------SSEEECCCTT-----SSSCSCSSEEEEEECTTSC------EEEEESSSCEEEECTTTCCEEEEC
T ss_pred ----------------cceEEcCCCC-----CCCCCCCeeEEEEECCCCC------EEEEECCCCeEEEcCCCCcEEEEe
Confidence 0000111000 0001134577888888876 555777778999998876544332
Q ss_pred cC--------CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec----CCCCCeEEEEEc-CCceEEEE---E
Q psy467 319 EK--------NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP----MGWGKVQDLAVT-GTQLWFRR---V 381 (845)
Q Consensus 319 ~g--------h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~----~h~~~VtsVafS-dg~lLaaS---V 381 (845)
.. ....|.+++..++|+.|..|+.++ |.+||..+++...... .....|.++... +|.+.+++ +
T Consensus 394 ~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl 473 (795)
T 4a2l_A 394 LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSAL 473 (795)
T ss_dssp CC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCE
T ss_pred cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCce
Confidence 11 135799999999998566677755 9999988876443221 234579999988 78877766 5
Q ss_pred EEEeeCC
Q psy467 382 GTWSHQD 388 (845)
Q Consensus 382 siW~~d~ 388 (845)
..|..+.
T Consensus 474 ~~~~~~~ 480 (795)
T 4a2l_A 474 VRFNPEQ 480 (795)
T ss_dssp EEEETTT
T ss_pred eEEeCCC
Confidence 5555443
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.9e-05 Score=83.66 Aligned_cols=162 Identities=12% Similarity=0.041 Sum_probs=114.6
Q ss_pred eEEeccCCCc--EEEEEEecCCCCEEEEEeC--CCeEEEEECCCCeeEEEecCC-CCCeEEEEEcCCCCEEEEEE-CCCc
Q psy467 8 AEDFMAHGAS--VNCLALGKKSGQVLATGGD--DKKVNLWALGKSNCIMSLSGH-STPVESVQFGNGEETLSAGC-QSGS 81 (845)
Q Consensus 8 l~~L~gH~~~--V~~LafSp~dg~~LaTgs~--DG~I~IWdl~t~~~i~~l~~h-~~~V~sLafSpdg~~LaSgs-~DGt 81 (845)
++++ .|... ...++|++ ++.++++.+. ++.|.++|..+++.+..+.-. ......+++. ++.|..+. .++.
T Consensus 12 v~~~-p~~~~~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 12 LNEF-PHDPYAFTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEE-ECCTTCCEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE
T ss_pred EEEE-ECCCCCCcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE
Confidence 3455 46643 68999998 6655555443 579999999999998887522 2233455555 45555554 5789
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC-----CCeEEEEEecCCCE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-----KSINSIRFSPDGQW 156 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~-----~~V~sLafSPdg~~ 156 (845)
+.++|..+++.+.++...... ...+++||+.++++..++.|.++|..+.+.+..+.-.. ..++.+.|. +|..
T Consensus 88 v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 999999999999998633122 23456688877777778999999999988888776322 236788888 6755
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.+....++.|.+ .|..+++.
T Consensus 165 yvn~~~~~~V~v-------------ID~~tg~V 184 (266)
T 2iwa_A 165 WANIWQTDCIAR-------------ISAKDGTL 184 (266)
T ss_dssp EEEETTSSEEEE-------------EETTTCCE
T ss_pred EEecCCCCeEEE-------------EECCCCcE
Confidence 555545778888 99998887
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=3e-05 Score=91.08 Aligned_cols=147 Identities=10% Similarity=0.115 Sum_probs=97.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCC----CCeEE-EEEcCCCCEEEEEEC------CCcEEEEECCCCcEEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHS----TPVES-VQFGNGEETLSAGCQ------SGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~----~~V~s-LafSpdg~~LaSgs~------DGtV~VWDl~tg~~v~~l 96 (845)
+..+++++.|+.|..+|..+|+.+.+..... ..+.+ ... .+..+++++. ++.|..+|..+|+.+.++
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 4577888889999999999999987765321 01111 111 1345666654 789999999999999887
Q ss_pred cCCCCC-------------------------------------e-EEEEEccCCCEEEEEECC----------------C
Q psy467 97 NGHKSS-------------------------------------I-TSVDFHPYGDYLCSGSLD----------------S 122 (845)
Q Consensus 97 ~~h~~~-------------------------------------V-~~lafspdg~~Lasgs~D----------------G 122 (845)
...... + ..+++.++...++.++.+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 532211 0 135666766677766532 3
Q ss_pred eEEEEECCCCceEEEEcCCCC---------CeEEEEEecCCC---EEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 123 FIKLWDLRRKGCIYTYRGHSK---------SINSIRFSPDGQ---WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 123 ~I~IWDl~t~~~l~~~~~h~~---------~V~sLafSPdg~---~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.|..+|..+++.+..+..... ...-+....+|+ .++.++.+|.+++ +|..+++.
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~-------------lD~~tG~~ 338 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYT-------------LNRENGNL 338 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEE-------------EETTTCCE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEE-------------EECCCCCE
Confidence 699999999999988763211 111123334674 5677888888888 99988887
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=0.00041 Score=84.31 Aligned_cols=270 Identities=13% Similarity=0.149 Sum_probs=170.8
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC-------CCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG-------HSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-------h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
..|.++...+ +|.+. .|+.+ -|.+|+..++........ ....|.++...++|. |..|+.++-|..|+..
T Consensus 263 ~~i~~i~~d~-~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 263 NYIRSLAMDS-QNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI 338 (795)
T ss_dssp SBEEEEEECT-TSCEE-EEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGG
T ss_pred CeEEEEEEcC-CCCEE-EEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCC
Confidence 5699999987 66644 45555 488999877665443211 235799999998887 5567777889999876
Q ss_pred CCcEEEEEc------CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC--------CCCCeEEEEEecCC
Q psy467 89 VPTVQRTLN------GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG--------HSKSINSIRFSPDG 154 (845)
Q Consensus 89 tg~~v~~l~------~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~--------h~~~V~sLafSPdg 154 (845)
++....... .....|.++...++|+ |..|+.++-|..||..++........ ....|.++...++|
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 417 (795)
T 4a2l_A 339 RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK 417 (795)
T ss_dssp GGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT
T ss_pred cccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence 654322211 0234689998888876 55677777799999887654432211 23568999998888
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
+.|.+|+.++-+.. ||..+++. ..+...... .
T Consensus 418 ~~lWigt~~~Gl~~-------------~d~~~~~~---------------------~~~~~~~~~-------l------- 449 (795)
T 4a2l_A 418 SLVYIGTHAGGLSI-------------LHRNSGQV---------------------ENFNQRNSQ-------L------- 449 (795)
T ss_dssp TEEEEEETTTEEEE-------------EETTTCCE---------------------EEECTTTSC-------C-------
T ss_pred CEEEEEeCcCceeE-------------EeCCCCcE---------------------EEeecCCCC-------c-------
Confidence 85666777677888 88776543 111100000 0
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
....|.++...++|. +.+ |+. +-+.+||..+++.
T Consensus 450 ---------------------------------------~~~~v~~i~~d~~g~-----lwi-gt~-~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 450 ---------------------------------------VNENVYAILPDGEGN-----LWL-GTL-SALVRFNPEQRSF 483 (795)
T ss_dssp ---------------------------------------SCSCEEEEEECSSSC-----EEE-EES-SCEEEEETTTTEE
T ss_pred ---------------------------------------CCCeeEEEEECCCCC-----EEE-Eec-CceeEEeCCCCeE
Confidence 001233333334443 443 344 4588999887755
Q ss_pred EEEecC------CCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEec-------CCCCCeEEEEEc-CCceEEEE
Q psy467 315 VSTTEK------NSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQP-------MGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 315 l~tl~g------h~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~-------~h~~~VtsVafS-dg~lLaaS 380 (845)
...... ....|.++..+++|.+.+... +||..|+..+++. .+. .....|.++... +|.+.+++
T Consensus 484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGT 560 (795)
T ss_dssp EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEE
T ss_pred EEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEe
Confidence 432211 235799999999998666554 6799999988765 332 123578999988 88877666
Q ss_pred ---EEEEeeC
Q psy467 381 ---VGTWSHQ 387 (845)
Q Consensus 381 ---VsiW~~d 387 (845)
+..|..+
T Consensus 561 ~~Gl~~~d~~ 570 (795)
T 4a2l_A 561 REGFYCFNEK 570 (795)
T ss_dssp SSCEEEEETT
T ss_pred CCCceeECCC
Confidence 5555433
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.47 E-value=2.9e-05 Score=81.73 Aligned_cols=197 Identities=11% Similarity=0.144 Sum_probs=130.4
Q ss_pred eeEEEecCCCCC--eEEEEEcCCCCEEEEEECCC--cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCCe
Q psy467 49 NCIMSLSGHSTP--VESVQFGNGEETLSAGCQSG--SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDSF 123 (845)
Q Consensus 49 ~~i~~l~~h~~~--V~sLafSpdg~~LaSgs~DG--tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG~ 123 (845)
+.+.++. |... ...+.|+ ++.+..+.+.+| .|+++|+++++.+..+... .........++++.|+... .++.
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence 3455554 5443 5899998 666666776666 8999999999999888643 3343433344466665555 5789
Q ss_pred EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceee
Q psy467 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 124 I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~ 203 (845)
+.+||..+.+.+.++.... ....+++|++.|+.+..++.|.+ +|..+.+.
T Consensus 109 v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~-------------iDp~T~~v-------------- 158 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRF-------------LDPESLTP-------------- 158 (262)
T ss_dssp EEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEE-------------ECTTTCSE--------------
T ss_pred EEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEE-------------EcCCCCeE--------------
Confidence 9999999999999987432 22334456777777666777888 99988777
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
+..+.-...+..... + ..+.|. ++.
T Consensus 159 ------~~~I~V~~~g~~~~~--l---------------------------NELe~~-~G~------------------- 183 (262)
T 3nol_A 159 ------VRTITVTAHGEELPE--L---------------------------NELEWV-DGE------------------- 183 (262)
T ss_dssp ------EEEEECEETTEECCC--E---------------------------EEEEEE-TTE-------------------
T ss_pred ------EEEEEeccCCccccc--c---------------------------ceeEEE-CCE-------------------
Confidence 443322111100000 0 123332 333
Q ss_pred cCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC------------CCCEEEEEEeCCCCEEEEEeCC
Q psy467 284 LPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN------------SSTIRRLTFSEGGECLLGGDTE 343 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh------------~~~VtslafSpdG~~Lasgs~D 343 (845)
+.+..-.++.|.+.|..+++.+..+... ....+.++|+|+++.|++.+..
T Consensus 184 ----------lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 184 ----------IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp ----------EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ----------EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 6666667889999999999998887642 1356899999998888877764
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=0.00011 Score=78.99 Aligned_cols=149 Identities=9% Similarity=-0.003 Sum_probs=97.6
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC--------------------CCCCeEEEEEcCCCCEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG--------------------HSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~--------------------h~~~V~sLafSpdg~~LaS 75 (845)
....+++|++ ++++++++..++.|..|+..++... .+.. ....+..+++.+++..|+.
T Consensus 19 ~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 4567789998 7887888888999999998765433 2210 0135789999983334555
Q ss_pred EECCCcEEEEECCCCcEEEEEcC-----CCCCeEEEEEcc-CCCEEEEEEC-----------------CCeEEEEECCCC
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNG-----HKSSITSVDFHP-YGDYLCSGSL-----------------DSFIKLWDLRRK 132 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~-----h~~~V~~lafsp-dg~~Lasgs~-----------------DG~I~IWDl~t~ 132 (845)
+...+.|..+|..++.. ..+.. .......+++.+ +|+..++-.. ++.|..||..++
T Consensus 97 ~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 55556688888876532 22211 113467899999 8976665432 367889998766
Q ss_pred ceEEEEcCCCCCeEEEEEecCCCEEEEE-eCCCcEEE
Q psy467 133 GCIYTYRGHSKSINSIRFSPDGQWIASG-GEDGVVRI 168 (845)
Q Consensus 133 ~~l~~~~~h~~~V~sLafSPdg~~Lasg-s~DG~I~I 168 (845)
+...... .-.....++|++++++|+.+ ..++.|..
T Consensus 176 ~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~ 211 (322)
T 2fp8_A 176 ETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVK 211 (322)
T ss_dssp EEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEE
T ss_pred EEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEE
Confidence 5433222 12345679999999876655 44577887
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.41 E-value=6.5e-05 Score=88.46 Aligned_cols=150 Identities=14% Similarity=0.072 Sum_probs=98.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCC----CeE-EEEEcC---CCC-EEEEEEC------CCcEEEEECCCCcE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHST----PVE-SVQFGN---GEE-TLSAGCQ------SGSIKIWNLAVPTV 92 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~----~V~-sLafSp---dg~-~LaSgs~------DGtV~VWDl~tg~~ 92 (845)
+..+++++.|+.|.-+|..+|+.+........ .+. ...... +++ .+++++. +|.|..+|..+|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45678888899999999999999877653220 111 111111 233 5666543 78999999999998
Q ss_pred EEEEcCCCCCe-----------------------------------------EEEEEccCCCEEEEEEC-----------
Q psy467 93 QRTLNGHKSSI-----------------------------------------TSVDFHPYGDYLCSGSL----------- 120 (845)
Q Consensus 93 v~~l~~h~~~V-----------------------------------------~~lafspdg~~Lasgs~----------- 120 (845)
+.........+ ..+++.|+...++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 87764321000 12456677777776663
Q ss_pred ---------C----CeEEEEECCCCceEEEEcC--CCC-------CeEEEEEe-cCCC---EEEEEeCCCcEEEeeeecc
Q psy467 121 ---------D----SFIKLWDLRRKGCIYTYRG--HSK-------SINSIRFS-PDGQ---WIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 121 ---------D----G~I~IWDl~t~~~l~~~~~--h~~-------~V~sLafS-Pdg~---~Lasgs~DG~I~I~~~~~~ 174 (845)
| +.|..+|..+++.+..+.. |.. ...-+... .+|+ .++.++.+|.+++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~------ 350 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYV------ 350 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEE------
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEE------
Confidence 2 5899999999999988753 211 11112222 4664 6778889999999
Q ss_pred CCceeEEEECCCCccC
Q psy467 175 TNTSIHVVDLSLVHPL 190 (845)
Q Consensus 175 ~~~~I~vWDl~tg~~l 190 (845)
+|..+|+.+
T Consensus 351 -------lD~~tG~~l 359 (582)
T 1flg_A 351 -------VDRSNGKLQ 359 (582)
T ss_dssp -------EETTTCCEE
T ss_pred -------EECCCCCEe
Confidence 999988873
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.40 E-value=0.00033 Score=74.83 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=94.4
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC--cEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG--SIKIW 85 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG--tV~VW 85 (845)
+.+|... .....++|++ +++++++...++.|..||.... ....+. .......++++++++++++....+ .|..+
T Consensus 25 ~~~~p~~-~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 25 ITSFPVN-TFLENLASAP-DGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp EEEECTT-CCEEEEEECT-TSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred eEeCCCC-CCcceEEECC-CCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence 3455433 5678999999 8887777768899999997653 333333 345689999999999666554332 47777
Q ss_pred ECCCCcEEEEEcC-CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-EEEEc---------CCCCCeEEEEEecCC
Q psy467 86 NLAVPTVQRTLNG-HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC-IYTYR---------GHSKSINSIRFSPDG 154 (845)
Q Consensus 86 Dl~tg~~v~~l~~-h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~-l~~~~---------~h~~~V~sLafSPdg 154 (845)
+..+++....... .......++..+++..+++-..++.|.++|..++.. +.... ..-.....+ ++++
T Consensus 101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCC
Confidence 8777775433321 222334555555554444444588999999875432 21111 011234555 7777
Q ss_pred CEEEEEe-CCCcEEE
Q psy467 155 QWIASGG-EDGVVRI 168 (845)
Q Consensus 155 ~~Lasgs-~DG~I~I 168 (845)
++|+.+. ..+.|..
T Consensus 179 ~~lyv~d~~~~~I~~ 193 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLR 193 (306)
T ss_dssp TEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCEEEE
Confidence 7665554 4556666
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=4.3e-05 Score=90.24 Aligned_cols=144 Identities=10% Similarity=0.090 Sum_probs=97.4
Q ss_pred EEEEeCCCeEEEEECCCCeeEEEecCCC----CCeEE-EEEcCCCCEEEEEE------CCCcEEEEECCCCcEEEEEcCC
Q psy467 31 LATGGDDKKVNLWALGKSNCIMSLSGHS----TPVES-VQFGNGEETLSAGC------QSGSIKIWNLAVPTVQRTLNGH 99 (845)
Q Consensus 31 LaTgs~DG~I~IWdl~t~~~i~~l~~h~----~~V~s-LafSpdg~~LaSgs------~DGtV~VWDl~tg~~v~~l~~h 99 (845)
|++++.|+.|.-+|..+|+.+....... ..+.+ .... ++ .+++++ .+|.|..+|..+|+.+..+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7788889999999999999987765322 01111 1111 33 555554 3799999999999999887532
Q ss_pred CCC-------------------------------------e-EEEEEccCCCEEEEEECC----------------CeEE
Q psy467 100 KSS-------------------------------------I-TSVDFHPYGDYLCSGSLD----------------SFIK 125 (845)
Q Consensus 100 ~~~-------------------------------------V-~~lafspdg~~Lasgs~D----------------G~I~ 125 (845)
... + ..+++.++...++.++.+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 211 0 134566777788877665 3899
Q ss_pred EEECCCCceEEEEcCCCCC---------eEEEEEe-cCC---CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 126 LWDLRRKGCIYTYRGHSKS---------INSIRFS-PDG---QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 126 IWDl~t~~~l~~~~~h~~~---------V~sLafS-Pdg---~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.+|..+++.+..+...... ..-+... .+| ..++.++.+|.+++ +|..+|+.
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~-------------lD~~tG~~ 345 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYT-------------LDRTDGAL 345 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEE-------------EETTTCCE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEE-------------EECCCCCE
Confidence 9999999999887643221 1112222 467 46777888999988 99988887
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=0.00018 Score=77.33 Aligned_cols=99 Identities=7% Similarity=0.005 Sum_probs=63.4
Q ss_pred CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC--------------------CCCCeEEEEEccCCCEEEEE
Q psy467 59 TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG--------------------HKSSITSVDFHPYGDYLCSG 118 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~--------------------h~~~V~~lafspdg~~Lasg 118 (845)
....+++|++++++++++..++.|..|+..++... .+.. .......+++.+++..|+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 34677889999987888888999999998865533 2210 01347889999833456666
Q ss_pred ECCCeEEEEECCCCceEEEEcC-----CCCCeEEEEEec-CCCEEEE
Q psy467 119 SLDSFIKLWDLRRKGCIYTYRG-----HSKSINSIRFSP-DGQWIAS 159 (845)
Q Consensus 119 s~DG~I~IWDl~t~~~l~~~~~-----h~~~V~sLafSP-dg~~Las 159 (845)
...+.|..+|..++.. ..+.. .......+++.+ +|++.++
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~ 143 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFT 143 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEE
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEE
Confidence 6566688888765432 22211 112456777777 7765444
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.27 E-value=0.00011 Score=77.36 Aligned_cols=190 Identities=14% Similarity=0.154 Sum_probs=123.9
Q ss_pred cEEEEEcCCCCC--eEEEEEccCCCEEEEEECCC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCc
Q psy467 91 TVQRTLNGHKSS--ITSVDFHPYGDYLCSGSLDS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGV 165 (845)
Q Consensus 91 ~~v~~l~~h~~~--V~~lafspdg~~Lasgs~DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~ 165 (845)
+.+.++. |... ...+.|+ ++.++.+++.+| .|+++|+.+++.+..+... .........++++.|.... .++.
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence 3456664 5443 4789998 666666777666 8999999999999888643 3343333333355554444 4677
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
+.+ ||..+.+. +..+.....+
T Consensus 109 v~v-------------~D~~t~~~--------------------~~ti~~~~eG-------------------------- 129 (262)
T 3nol_A 109 GFV-------------WNIRNLRQ--------------------VRSFNYDGEG-------------------------- 129 (262)
T ss_dssp EEE-------------EETTTCCE--------------------EEEEECSSCC--------------------------
T ss_pred EEE-------------EECccCcE--------------------EEEEECCCCc--------------------------
Confidence 777 99998888 5555432221
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC--C-
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN--S- 322 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh--~- 322 (845)
+.++ +++. .|+.+..++.|.++|..+.+.+.++... .
T Consensus 130 ---------~glt--~dg~-----------------------------~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~ 169 (262)
T 3nol_A 130 ---------WGLT--HNDQ-----------------------------YLIMSDGTPVLRFLDPESLTPVRTITVTAHGE 169 (262)
T ss_dssp ---------CCEE--ECSS-----------------------------CEEECCSSSEEEEECTTTCSEEEEEECEETTE
T ss_pred ---------eEEe--cCCC-----------------------------EEEEECCCCeEEEEcCCCCeEEEEEEeccCCc
Confidence 2222 2333 4444445788999999999888877642 1
Q ss_pred --CCEEEEEEeCCCCEEEEEeC-CC-EEEEEecCCceEEEecCC------------CCCeEEEEEc-CCceEEEEEEEE
Q psy467 323 --STIRRLTFSEGGECLLGGDT-EG-LKVYGWEPARQYDAQPMG------------WGKVQDLAVT-GTQLWFRRVGTW 384 (845)
Q Consensus 323 --~~VtslafSpdG~~Lasgs~-DG-I~IWDl~tgk~l~tl~~h------------~~~VtsVafS-dg~lLaaSVsiW 384 (845)
..++.+.|. +|+ |.+... +. |.+.|..+++.+..+... ....+.|||+ +++.|.++-..|
T Consensus 170 ~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 170 ELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp ECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred cccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 345668887 675 555554 44 999999999998877542 1356899999 666666653333
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.24 E-value=0.0016 Score=71.25 Aligned_cols=150 Identities=16% Similarity=0.036 Sum_probs=94.2
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v 93 (845)
.+..+|.+..+ .+ +|+.+. ...|+..++........+. ....+..++|++.+..|.... ..+.|..+++......
T Consensus 33 ~d~~~C~~~~~-~~-~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 33 PDRRSCKALGP-EP-VLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp TTSSCEEESSS-CC-EEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCCccccccc-Cc-eeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 34456666655 33 444443 3458888886655444444 344588999998766666554 5688999999876544
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEE-EECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-C-CcEEE
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCS-GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-D-GVVRI 168 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Las-gs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-D-G~I~I 168 (845)
..+.........+++.+.+..|+. -...+.|.+.++........+...-.....++++|.+..|+.... . +.|..
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 444433344578999886655544 445678999998754433333334456789999986665554443 2 44555
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.24 E-value=0.0031 Score=76.41 Aligned_cols=300 Identities=10% Similarity=0.053 Sum_probs=169.7
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-------CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-------GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-------~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
..|.++...+ +|.+.+ |+.+ -+.+||..+++...... -....|.++...++|. |..|+..+-|.++|..
T Consensus 211 ~~i~~i~~d~-~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 211 NDVRCIYKDT-NGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQ 286 (781)
T ss_dssp SSEEEEEECT-TCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETT
T ss_pred CceeEEEEcC-CCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCC
Confidence 4688888877 666554 4445 58899987665432211 1245799999888775 5556665678999988
Q ss_pred CCcEEEEEc--------------CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc---------CCCCCe
Q psy467 89 VPTVQRTLN--------------GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---------GHSKSI 145 (845)
Q Consensus 89 tg~~v~~l~--------------~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~---------~h~~~V 145 (845)
++....... .....|.++...++|. |..|+.++-|..++..+........ .....|
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 765332211 1235688998888876 5667767778899887654332211 123568
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCC-----CCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG-----TPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~-----~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
.++...++|++ ..|+.++-+.. ||..++.... ......+.++...+++.+.... ...+
T Consensus 366 ~~i~~d~~g~l-Wigt~~~Gl~~-------------~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt--~~~G- 428 (781)
T 3v9f_A 366 SSVCDDGQGKL-WIGTDGGGINV-------------FENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGT--YLGN- 428 (781)
T ss_dssp EEEEECTTSCE-EEEEBSSCEEE-------------EETTEEEEECC-----CCCSBEEEEEECTTSCEEEEE--TTEE-
T ss_pred EEEEEcCCCCE-EEEeCCCcEEE-------------EECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEe--ccCC-
Confidence 89998887774 45565555777 6655432211 0112223333333333322110 0001
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCC-cCCCCcccccccCceeEEEcCCCCcccceEEEEEe
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS-LNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS 299 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~-~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs 299 (845)
+ ..+.+... +..-.........|.++...++|. |..|+
T Consensus 429 ------l-----------------------------~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~------lwigt 467 (781)
T 3v9f_A 429 ------I-----------------------------SYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK------IWIGT 467 (781)
T ss_dssp ------E-----------------------------EEECSSSCEEEECCSTTTCCCCEEEEEECTTSE------EEEEE
T ss_pred ------E-----------------------------EEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC------EEEEE
Confidence 1 11222110 000000001124567787777775 44444
Q ss_pred CCCeEEEEECCCCeEEEEecCC-----CCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecC----CCCCeEEEE
Q psy467 300 ADRTVNFWDLEKFSLVSTTEKN-----SSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPM----GWGKVQDLA 370 (845)
Q Consensus 300 ~DG~I~IWDl~s~~~l~tl~gh-----~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~----h~~~VtsVa 370 (845)
. +-|..||..+++........ ...|.+++..++|.+.+....+||..|+..+++. ..+.. ....|.++.
T Consensus 468 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~ 545 (781)
T 3v9f_A 468 H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIY 545 (781)
T ss_dssp T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEE
T ss_pred C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEE
Confidence 4 56899998876543322211 3579999999999866655446788888776543 33321 235688998
Q ss_pred Ec-CCceEEEE
Q psy467 371 VT-GTQLWFRR 380 (845)
Q Consensus 371 fS-dg~lLaaS 380 (845)
.. +|.+.+++
T Consensus 546 ~d~~g~lWi~T 556 (781)
T 3v9f_A 546 RSSKGQMWLAT 556 (781)
T ss_dssp ECTTSCEEEEE
T ss_pred ECCCCCEEEEE
Confidence 88 88877766
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.24 E-value=0.00017 Score=86.31 Aligned_cols=103 Identities=15% Similarity=0.120 Sum_probs=75.7
Q ss_pred CCeEEEEECCCCeeEEEecCC--C-----------------------------CCeEEEEEcCCCCEEEEEECCC-----
Q psy467 37 DKKVNLWALGKSNCIMSLSGH--S-----------------------------TPVESVQFGNGEETLSAGCQSG----- 80 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h--~-----------------------------~~V~sLafSpdg~~LaSgs~DG----- 80 (845)
+|.|..+|..+|+.+.++... . .....++++++...++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 589999999999998877521 0 0112468888888888887665
Q ss_pred --------------cEEEEECCCCcEEEEEcC--CC-------CCeEEEEEccCCC---EEEEEECCCeEEEEECCCCce
Q psy467 81 --------------SIKIWNLAVPTVQRTLNG--HK-------SSITSVDFHPYGD---YLCSGSLDSFIKLWDLRRKGC 134 (845)
Q Consensus 81 --------------tV~VWDl~tg~~v~~l~~--h~-------~~V~~lafspdg~---~Lasgs~DG~I~IWDl~t~~~ 134 (845)
.|..+|.++|+.+..++. |. .+.....+..+|+ .++.++.+|.++++|..+|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 399999999999988764 22 2233333334665 688999999999999999998
Q ss_pred EEEEc
Q psy467 135 IYTYR 139 (845)
Q Consensus 135 l~~~~ 139 (845)
+....
T Consensus 337 l~~~~ 341 (668)
T 1kv9_A 337 ISAEK 341 (668)
T ss_dssp EEEEE
T ss_pred ecccc
Confidence 85543
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.22 E-value=0.00036 Score=72.72 Aligned_cols=197 Identities=10% Similarity=0.057 Sum_probs=127.0
Q ss_pred eeEEEecCCC--CCeEEEEEcCCCCEEEEEECC--CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEE-EECCCe
Q psy467 49 NCIMSLSGHS--TPVESVQFGNGEETLSAGCQS--GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCS-GSLDSF 123 (845)
Q Consensus 49 ~~i~~l~~h~--~~V~sLafSpdg~~LaSgs~D--GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Las-gs~DG~ 123 (845)
+.+.++ .|. .-...+.|+. +.+..+.+.+ ..|+++|+++++.+..+..... ........+++.|+. .-.++.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCE
Confidence 345555 354 4577999986 5555555554 4899999999999988864332 333333333555544 446789
Q ss_pred EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceee
Q psy467 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 124 I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~ 203 (845)
+.+||..+.+.+.++.... .-+.++ +|++.|+++..++.|.+ +|..+.+.
T Consensus 87 v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~-------------iDp~t~~~-------------- 136 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRK-------------LDPDTLQQ-------------- 136 (243)
T ss_dssp EEEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEE-------------ECTTTCCE--------------
T ss_pred EEEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEE-------------EeCCCCeE--------------
Confidence 9999999999999987533 234444 56777777767788888 99988776
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
+..+.-...+.. +. ....+.+. ++.
T Consensus 137 ------~~~I~V~~~g~~-----~~------------------------~lNeLe~~-~G~------------------- 161 (243)
T 3mbr_X 137 ------VGSIKVTAGGRP-----LD------------------------NLNELEWV-NGE------------------- 161 (243)
T ss_dssp ------EEEEECEETTEE-----CC------------------------CEEEEEEE-TTE-------------------
T ss_pred ------EEEEEEccCCcc-----cc------------------------cceeeEEe-CCE-------------------
Confidence 443322111100 00 00222222 333
Q ss_pred cCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC-------------CCCEEEEEEeCCCCEEEEEeCC
Q psy467 284 LPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN-------------SSTIRRLTFSEGGECLLGGDTE 343 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh-------------~~~VtslafSpdG~~Lasgs~D 343 (845)
+++..-.+..|.+.|..+++.+..+.-. ....+.|+|+|+++.|++.+..
T Consensus 162 ----------lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 162 ----------LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp ----------EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred ----------EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 5555556789999999999998887621 1356899999988777776654
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.22 E-value=0.0039 Score=75.46 Aligned_cols=302 Identities=13% Similarity=0.057 Sum_probs=171.5
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-------CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-------GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-------~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
..|.++...+ +|. |..|+.++-|..|+..+++...... -....|.++...+++.+.+ |+.+ -+.+||..
T Consensus 163 ~~i~~i~~d~-~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~ 238 (781)
T 3v9f_A 163 EQTWTATEAE-DGK-LYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNAN 238 (781)
T ss_dssp CCEEEEEEEE-TTE-EEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETT
T ss_pred cceEEEEECC-CCC-EEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCC
Confidence 4588888876 555 4456666568899987765433211 0135699999988887555 4444 69999988
Q ss_pred CCcEEEEEc-------CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc--------------CCCCCeEE
Q psy467 89 VPTVQRTLN-------GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR--------------GHSKSINS 147 (845)
Q Consensus 89 tg~~v~~l~-------~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~--------------~h~~~V~s 147 (845)
+++...... .....|.++...++|. |..|+..+-|.++|..++....... .....|.+
T Consensus 239 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~ 317 (781)
T 3v9f_A 239 TETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARY 317 (781)
T ss_dssp TTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEE
T ss_pred CCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEE
Confidence 765432211 1235688998887775 5566664568899987665332111 12456899
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC-----------CCCCCCCCcceeecCCCCeEEEEecC
Q psy467 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL-----------GTPPPQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l-----------~~~~~~~i~svs~spdg~~l~~~~~h 216 (845)
+...++|++ ..|+.++-|.. |+..+.... ..+....+.++....+|.+.....
T Consensus 318 i~~D~~g~l-Wigt~~~Gl~~-------------~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~-- 381 (781)
T 3v9f_A 318 IFQDSFNNI-WIGTWGGGINF-------------ISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTD-- 381 (781)
T ss_dssp EEECSSCCE-EEEEBSSCEEE-------------ECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEB--
T ss_pred EEEeCCCCE-EEEecCCeEEE-------------eCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeC--
Confidence 999988874 45665555666 554432210 111223344555555444322110
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEE-EcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAI-FQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~-fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
..+ +..+.... ..+. +.... ......|.+++..++|. |
T Consensus 382 ~~G-------l~~~~~~~--------------------~~~~~~~~~~--------~~~~~~v~~i~~d~~g~------l 420 (781)
T 3v9f_A 382 GGG-------INVFENGK--------------------RVAIYNKENR--------ELLSNSVLCSLKDSEGN------L 420 (781)
T ss_dssp SSC-------EEEEETTE--------------------EEEECC-------------CCCSBEEEEEECTTSC------E
T ss_pred CCc-------EEEEECCC--------------------CeEEEccCCC--------CCCCcceEEEEECCCCC------E
Confidence 111 11111000 0000 00000 01124567777777776 4
Q ss_pred EEEeCCCeEEEEECCCCeEEEEec--CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecCC-----CCCeEE
Q psy467 296 TSSSADRTVNFWDLEKFSLVSTTE--KNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMG-----WGKVQD 368 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~~l~tl~--gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~h-----~~~Vts 368 (845)
..|+.++-+..||..+++...... .....|.++...++|.+.+ |+.+||.+|+..+++........ ...|.+
T Consensus 421 Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 421 WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EETTEEEEEESSSSSCCEEECTTTSSCSCSCEEE
T ss_pred EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EECCceEEEeCCCCeEEecccCcccccccceeEE
Confidence 456666779999988775433221 1346799999988887554 45566999998876544322222 367899
Q ss_pred EEEc-CCceEEEE
Q psy467 369 LAVT-GTQLWFRR 380 (845)
Q Consensus 369 VafS-dg~lLaaS 380 (845)
+... +|.+.+++
T Consensus 500 i~~d~~g~lWigt 512 (781)
T 3v9f_A 500 IAQDSEGRFWIGT 512 (781)
T ss_dssp EEECTTCCEEEEE
T ss_pred EEEcCCCCEEEEE
Confidence 9888 88877766
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.22 E-value=0.00011 Score=77.48 Aligned_cols=158 Identities=11% Similarity=0.111 Sum_probs=112.5
Q ss_pred EEeccCCCc--EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCe--EEEEEcCCCCEEEEEECCCcEEE
Q psy467 9 EDFMAHGAS--VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPV--ESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~--V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V--~sLafSpdg~~LaSgs~DGtV~V 84 (845)
+++ .|... ...|.|+ ++.++.+.+.+|.|+++|+++++.+..+ -. ... ..+++..+ ...+....++.+.+
T Consensus 47 ~~~-phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~-~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 47 REY-PHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGE-RLYQLTWTEGLLFT 120 (268)
T ss_dssp EEE-ECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSS-CEEEEESSSCEEEE
T ss_pred EEE-cCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCC-EEEEEEccCCEEEE
Confidence 445 46543 4789996 4677778888899999999999988877 22 233 34555432 33334446899999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC-----CCeEEEEEecCCCEEEE
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-----KSINSIRFSPDGQWIAS 159 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~-----~~V~sLafSPdg~~Las 159 (845)
||.++.+.+.++... ..-..++ +|++.|+.+..++.|.++|..+.+.+.++.... ..++.+.|. +|..++.
T Consensus 121 ~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyan 196 (268)
T 3nok_A 121 WSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYAN 196 (268)
T ss_dssp EETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEE
Confidence 999999999999743 2223444 568888888788999999999999888876422 245677777 6765555
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
...+..|.+ .|..+++.
T Consensus 197 vw~s~~I~v-------------IDp~TG~V 213 (268)
T 3nok_A 197 IWHSSDVLE-------------IDPATGTV 213 (268)
T ss_dssp ETTCSEEEE-------------ECTTTCBE
T ss_pred ECCCCeEEE-------------EeCCCCcE
Confidence 546677777 89988887
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.20 E-value=0.00015 Score=76.37 Aligned_cols=195 Identities=9% Similarity=0.003 Sum_probs=126.7
Q ss_pred eeEEEecCCC--CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE-EEECCCeEE
Q psy467 49 NCIMSLSGHS--TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIK 125 (845)
Q Consensus 49 ~~i~~l~~h~--~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La-sgs~DG~I~ 125 (845)
+.+.++. |. .-...+.|+ ++.+.++.+.+|.|+++|+++++.+..+ . ..........++++.|+ ..-.++.+.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEE
Confidence 3445553 43 345889998 4566677777889999999999888777 2 23333322333444444 444678999
Q ss_pred EEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecC
Q psy467 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSH 205 (845)
Q Consensus 126 IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~sp 205 (845)
+||..+.+.+.++... ..-+.++ +|++.|+.+..++.|.+ +|..+.+.
T Consensus 120 V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~-------------iDp~T~~v---------------- 167 (268)
T 3nok_A 120 TWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTF-------------HEPDGFAL---------------- 167 (268)
T ss_dssp EEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEE-------------ECTTTCCE----------------
T ss_pred EEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEE-------------EcCCCCeE----------------
Confidence 9999999999998743 2224444 56788887777888888 99988777
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
+..+.-...+.. +. ....+.|. +|.
T Consensus 168 ----~~~I~V~~~g~~-----v~------------------------~lNeLe~~-dG~--------------------- 192 (268)
T 3nok_A 168 ----VGAVQVKLRGQP-----VE------------------------LINELECA-NGV--------------------- 192 (268)
T ss_dssp ----EEEEECEETTEE-----CC------------------------CEEEEEEE-TTE---------------------
T ss_pred ----EEEEEeCCCCcc-----cc------------------------cccccEEe-CCE---------------------
Confidence 443322111100 00 00223333 333
Q ss_pred CCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC-------------CCCEEEEEEeCCCCEEEEEeC
Q psy467 286 QSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN-------------SSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 286 dg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh-------------~~~VtslafSpdG~~Lasgs~ 342 (845)
+.+....++.|.+.|..+++.+..+.-. ....+.|+|+|+++.|++.+.
T Consensus 193 --------lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 193 --------IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp --------EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred --------EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6666666889999999999998887631 135789999998766666554
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.19 E-value=0.0016 Score=72.29 Aligned_cols=148 Identities=16% Similarity=0.036 Sum_probs=92.3
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~ 95 (845)
.-.|.+..+ . .+|+.+. ...|+.+++........+. ....+..++|++.+..|+... ..+.|..+++........
T Consensus 78 ~~~C~~~~~-~-~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 78 RRSCKALGP-E-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp SSCEEECSS-C-CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred CCeECCccc-c-ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence 344555544 3 3444443 3568888887665544444 344588999998666665554 568899999987655444
Q ss_pred EcCCCCCeEEEEEccCCCEEEEE-ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC--CcEEE
Q psy467 96 LNGHKSSITSVDFHPYGDYLCSG-SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED--GVVRI 168 (845)
Q Consensus 96 l~~h~~~V~~lafspdg~~Lasg-s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D--G~I~I 168 (845)
+.........+++.+.+..|+.+ ...+.|.+.++........+...-.....++++|.+..|+..... +.|..
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 229 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEE
Confidence 44333445678898866555544 456788888886544333343344567899999877666555432 34544
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=0.00032 Score=82.80 Aligned_cols=111 Identities=8% Similarity=0.112 Sum_probs=75.9
Q ss_pred CCEEEEEeC-CCeEEEEEC-CCCeeEEEecCCCCC-----------eEEEEEcCCCCE----EEEEECCCcEEEEECCCC
Q psy467 28 GQVLATGGD-DKKVNLWAL-GKSNCIMSLSGHSTP-----------VESVQFGNGEET----LSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 28 g~~LaTgs~-DG~I~IWdl-~t~~~i~~l~~h~~~-----------V~sLafSpdg~~----LaSgs~DGtV~VWDl~tg 90 (845)
+..|++++. ++.|.-+|. .+|+.+.++...... ...++++|.+.. |+.++.|+.|..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 346667777 889999999 899998887643211 123455444444 888888999999999999
Q ss_pred cEEEEEcCCCC----CeEE-EEEccCCCEEEEEE------CCCeEEEEECCCCceEEEEcC
Q psy467 91 TVQRTLNGHKS----SITS-VDFHPYGDYLCSGS------LDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 91 ~~v~~l~~h~~----~V~~-lafspdg~~Lasgs------~DG~I~IWDl~t~~~l~~~~~ 140 (845)
+.+........ .+.+ ..+. ++ .+++++ .+|.|+.+|.++++.+.++..
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 99887653220 1211 1111 34 555554 379999999999999988764
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.14 E-value=7.3e-05 Score=89.14 Aligned_cols=165 Identities=11% Similarity=0.029 Sum_probs=97.2
Q ss_pred EEEEecCCCCEEEEEeCCC-----------eEEEEECCCCee--EEEec-CCCCCeEEEEEcCCCCEEEEEEC-CCcEEE
Q psy467 20 CLALGKKSGQVLATGGDDK-----------KVNLWALGKSNC--IMSLS-GHSTPVESVQFGNGEETLSAGCQ-SGSIKI 84 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG-----------~I~IWdl~t~~~--i~~l~-~h~~~V~sLafSpdg~~LaSgs~-DGtV~V 84 (845)
++++.+.++++++.|+.+. .+.+||..+++- +..+. .+.....++++..++..+++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 5566654678888887543 588999877642 22332 23334456778889999999884 568999
Q ss_pred EECCCCcEEEEEcCCCC-CeEEEEEccCCCEEEEEE-CC-----CeEEEEECCCCceEEEE----cCCCCCeEEEEEecC
Q psy467 85 WNLAVPTVQRTLNGHKS-SITSVDFHPYGDYLCSGS-LD-----SFIKLWDLRRKGCIYTY----RGHSKSINSIRFSPD 153 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~-~V~~lafspdg~~Lasgs-~D-----G~I~IWDl~t~~~l~~~----~~h~~~V~sLafSPd 153 (845)
||..+++....-..+.. .-.+++..++++.++.|+ .+ ..+.+||..+++....- ......-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 99987754332221111 223556667899999988 44 46899999876543320 000000001122345
Q ss_pred CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCc
Q psy467 154 GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 154 g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
+..++.++.+|.+.. ......+..||..+..
T Consensus 350 ~~iyv~Gg~~g~~~~----~~~~~~v~~yd~~~~~ 380 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQ----AGPSTAMNWYYTSGSG 380 (656)
T ss_dssp CSCCEEECGGGCEEE----CCSSSEEEEEECSTTC
T ss_pred CceEEEECCCCcEEE----ecCccceeeeecCCcc
Confidence 666677777776554 1223345557766543
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=0.0003 Score=82.55 Aligned_cols=110 Identities=10% Similarity=0.029 Sum_probs=75.5
Q ss_pred CEEEEEeC------CCeEEEEECCCCeeEEEecCCCCC-------------------------------------e-EEE
Q psy467 29 QVLATGGD------DKKVNLWALGKSNCIMSLSGHSTP-------------------------------------V-ESV 64 (845)
Q Consensus 29 ~~LaTgs~------DG~I~IWdl~t~~~i~~l~~h~~~-------------------------------------V-~sL 64 (845)
..+++++. ++.|..+|..+++.+.++...... + ..+
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 34555554 789999999999998876532110 0 135
Q ss_pred EEcCCCCEEEEEECC----------------CcEEEEECCCCcEEEEEcCC--C--------CCeEEEEEccCCC---EE
Q psy467 65 QFGNGEETLSAGCQS----------------GSIKIWNLAVPTVQRTLNGH--K--------SSITSVDFHPYGD---YL 115 (845)
Q Consensus 65 afSpdg~~LaSgs~D----------------GtV~VWDl~tg~~v~~l~~h--~--------~~V~~lafspdg~---~L 115 (845)
++.++...++.++.+ +.|..+|.++|+.+..++.. . .++ .+....+|+ .+
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLL 319 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEE
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEE
Confidence 666766677666532 35999999999998887532 1 122 123334674 57
Q ss_pred EEEECCCeEEEEECCCCceEEEEc
Q psy467 116 CSGSLDSFIKLWDLRRKGCIYTYR 139 (845)
Q Consensus 116 asgs~DG~I~IWDl~t~~~l~~~~ 139 (845)
+.++.+|.+.++|..+++.+..+.
T Consensus 320 ~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 320 SHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEeCCCcEEEEEECCCCCEEeeec
Confidence 788899999999999999887765
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.12 E-value=0.0019 Score=68.77 Aligned_cols=240 Identities=11% Similarity=0.017 Sum_probs=133.6
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC-C-eEEE
Q psy467 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD-S-FIKL 126 (845)
Q Consensus 49 ~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D-G-~I~I 126 (845)
+.+..+.. ......++|+++++.+++-..++.|..||... +....+. .......+++.++|+++++.... + .|..
T Consensus 23 ~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 23 KIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 44455543 25678999999998777666789999999875 3444343 23468899999999866554432 2 4777
Q ss_pred EECCCCceEEEEcC-CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecC
Q psy467 127 WDLRRKGCIYTYRG-HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSH 205 (845)
Q Consensus 127 WDl~t~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~sp 205 (845)
+|..+++....... .......++..+++..+++-..++.|.. +|..++..
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~-------------~d~~~~~~---------------- 150 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWL-------------IDVVQPSG---------------- 150 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEE-------------EETTTTEE----------------
T ss_pred EcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEE-------------EeCCCCcE----------------
Confidence 78777765433221 1223345555554443443334666666 77654321
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
+ +......... . .+.+. ....+.+ ++
T Consensus 151 --~-v~~~~~~~~~-------~--------------------------------~~~~~----------~~~pngi--s~ 176 (306)
T 2p4o_A 151 --S-IWLEHPMLAR-------S--------------------------------NSESV----------FPAANGL--KR 176 (306)
T ss_dssp --E-EEEECGGGSC-------S--------------------------------STTCC----------SCSEEEE--EE
T ss_pred --e-EEEECCcccc-------c--------------------------------cccCC----------CCcCCCc--Cc
Confidence 0 0000000000 0 00000 0011112 44
Q ss_pred CCCcccceEEEEEeCCCeEEEEECCC-CeE--EEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceE--EEe
Q psy467 286 QSPMLCFILTTSSSADRTVNFWDLEK-FSL--VSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQY--DAQ 359 (845)
Q Consensus 286 dg~~~~~~lLatgs~DG~I~IWDl~s-~~~--l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l--~tl 359 (845)
+++. ++++-...+.|..||+.. ++. ...+.. ......++++++|++.++....+ |.+++.+ ++.. ..+
T Consensus 177 dg~~----lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~ 250 (306)
T 2p4o_A 177 FGNF----LYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQA 250 (306)
T ss_dssp ETTE----EEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECG
T ss_pred CCCE----EEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeec
Confidence 4431 555666678999999864 321 111111 12456789999998766655555 9999865 5553 234
Q ss_pred cCCCCCeEEEEEc----CCceEEEE
Q psy467 360 PMGWGKVQDLAVT----GTQLWFRR 380 (845)
Q Consensus 360 ~~h~~~VtsVafS----dg~lLaaS 380 (845)
......+++++|. +++.|.++
T Consensus 251 ~~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 251 EQGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp GGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred ccccCCceEEEEecccCCCCEEEEE
Confidence 4344678999996 55655544
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.09 E-value=0.01 Score=63.82 Aligned_cols=137 Identities=9% Similarity=0.001 Sum_probs=85.7
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCC----CcEEEEEcCCCCCeE
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAV----PTVQRTLNGHKSSIT 104 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~t----g~~v~~l~~h~~~V~ 104 (845)
+|+.+.. ..|+..++.+.+....+. ....+..++|++.+..|+.+. ..+.|..+++.. ......+........
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 3444443 468999998776655554 445688999998776666554 468899999876 222223332334467
Q ss_pred EEEEccCCCEEEEE-ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC--CcEEE
Q psy467 105 SVDFHPYGDYLCSG-SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED--GVVRI 168 (845)
Q Consensus 105 ~lafspdg~~Lasg-s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D--G~I~I 168 (845)
.+++.+.+..|+.+ ...+.|.+.++........+...-.....++++|.+..|+.+... +.|..
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~ 147 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 147 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEE
Confidence 89998765555544 567889999987543333333334567899999876665555432 45555
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.04 E-value=0.00051 Score=80.80 Aligned_cols=110 Identities=11% Similarity=0.050 Sum_probs=75.7
Q ss_pred EEEEEe------CCCeEEEEECCCCeeEEEecCCCCCe-----------------------------------------E
Q psy467 30 VLATGG------DDKKVNLWALGKSNCIMSLSGHSTPV-----------------------------------------E 62 (845)
Q Consensus 30 ~LaTgs------~DG~I~IWdl~t~~~i~~l~~h~~~V-----------------------------------------~ 62 (845)
.+++++ .+|.|.-+|..+|+.+.........+ .
T Consensus 170 ~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~ 249 (582)
T 1flg_A 170 LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQ 249 (582)
T ss_dssp EEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCS
T ss_pred EEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccC
Confidence 565654 37899999999999887654211110 1
Q ss_pred EEEEcCCCCEEEEEEC--------------------C----CcEEEEECCCCcEEEEEcC--CC--------CCeEEEEE
Q psy467 63 SVQFGNGEETLSAGCQ--------------------S----GSIKIWNLAVPTVQRTLNG--HK--------SSITSVDF 108 (845)
Q Consensus 63 sLafSpdg~~LaSgs~--------------------D----GtV~VWDl~tg~~v~~l~~--h~--------~~V~~laf 108 (845)
.++++++...++.++. | +.|..+|..+|+.+..++. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 2456677777776663 2 5899999999999988753 22 1121 222
Q ss_pred c-cCCC---EEEEEECCCeEEEEECCCCceEEEEcC
Q psy467 109 H-PYGD---YLCSGSLDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 109 s-pdg~---~Lasgs~DG~I~IWDl~t~~~l~~~~~ 140 (845)
. .+|+ .++.++.+|.++++|..+++.+..+..
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 2 4674 788899999999999999999877654
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.03 E-value=0.0013 Score=69.06 Aligned_cols=199 Identities=7% Similarity=0.069 Sum_probs=128.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC-CCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG-HSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
+.+.+-.+.+..++|+|+++.++++...++.|...|.. ++.++.+.- -......|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 56778778999999999556677778889999999987 888777642 2356889999998877666556788999988
Q ss_pred CCCcE---EEEEc------CCCCCeEEEEEccCCCEEEEEECCCeEEEEECC---CCceEEEEc-------CCCCCeEEE
Q psy467 88 AVPTV---QRTLN------GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR---RKGCIYTYR-------GHSKSINSI 148 (845)
Q Consensus 88 ~tg~~---v~~l~------~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~---t~~~l~~~~-------~h~~~V~sL 148 (845)
..... +.... ........++|+|.++.|+++.......+|.+. ....+..+. .+...+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 76442 22221 123456899999999877777765555555543 111122221 123457899
Q ss_pred EEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEE
Q psy467 149 RFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRK 211 (845)
Q Consensus 149 afSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~ 211 (845)
+++|....+++.+ ....+.. ++.....+..+.+..+..--.....+.-.+++.++|++..
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~---~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI 239 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQE---VTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI 239 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEE---ECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE
T ss_pred EEcCCCCeEEEEECCCCeEEE---EcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE
Confidence 9999655555444 4444544 4444445666666644321111134566899999997443
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.02 E-value=0.012 Score=65.75 Aligned_cols=138 Identities=9% Similarity=0.002 Sum_probs=88.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCC----cEEEEEcCCCCCe
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVP----TVQRTLNGHKSSI 103 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg----~~v~~l~~h~~~V 103 (845)
.+|+.+. ...|+..++........+. ....+..++|++.+..|.... ..+.|..+++... .....+.......
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred ceeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 3555554 3589999987665544444 456789999998777666654 4678989998752 2333444344567
Q ss_pred EEEEEccCCCEEEE-EECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC--CCcEEE
Q psy467 104 TSVDFHPYGDYLCS-GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE--DGVVRI 168 (845)
Q Consensus 104 ~~lafspdg~~Las-gs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~--DG~I~I 168 (845)
..+++.+.+..|+. -...+.|.+.++........+...-.....|+++|.+.+|+.... .+.|..
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~ 229 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 229 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEE
Confidence 88999885555544 456778999998755444444444456889999997666655442 245555
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.015 Score=62.79 Aligned_cols=269 Identities=10% Similarity=0.002 Sum_probs=144.2
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec----CCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS----GHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~----~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
-|+...+. ....+.+|.|.+ .+..++ ++.+|.| +...+.++.-.... .....+.+|.|++ +..++ ++..+
T Consensus 26 ~W~~~~~~-~~~~~~~v~~~~-~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g 99 (327)
T 2xbg_A 26 PWEAIQLP-TTATILDMSFID-RHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPP 99 (327)
T ss_dssp CEEEEECS-CSSCEEEEEESS-SSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETT
T ss_pred CceEeecC-CCCcEEEEEECC-CCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCC
Confidence 46555543 345799999976 667677 4567765 33344443322221 1245689999986 44444 44566
Q ss_pred cEEEEECCCCcEEEEEc---CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-EEEEcCCCCCeEEEEEecCCCE
Q psy467 81 SIKIWNLAVPTVQRTLN---GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC-IYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~---~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~-l~~~~~h~~~V~sLafSPdg~~ 156 (845)
.|.. ..+.|+.-..+. .+...+..+.+.+++..++++ .+|.|.. ....++. ..........+..+++.+++.+
T Consensus 100 ~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~ 176 (327)
T 2xbg_A 100 IMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEY 176 (327)
T ss_dssp EEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCE
T ss_pred eEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcE
Confidence 4433 333344333332 133457788887777655554 4564422 1222322 2222344567889999998887
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
++++ .+|.+.. .+|- .+.. -..+..
T Consensus 177 ~~~g-~~G~~~~------------S~d~-gG~t--------------------W~~~~~--------------------- 201 (327)
T 2xbg_A 177 VAVS-SRGSFYS------------TWEP-GQTA--------------------WEPHNR--------------------- 201 (327)
T ss_dssp EEEE-TTSSEEE------------EECT-TCSS--------------------CEEEEC---------------------
T ss_pred EEEE-CCCcEEE------------EeCC-CCCc--------------------eeECCC---------------------
Confidence 7665 4455444 0221 0111 000000
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~ 316 (845)
+. ...+..+++.+++. ++ ..+.+|.+++++...++...
T Consensus 202 ------------------------~~------------~~~~~~~~~~~~g~-----~~-~~~~~G~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 202 ------------------------TT------------SRRLHNMGFTPDGR-----LW-MIVNGGKIAFSDPDNSENWG 239 (327)
T ss_dssp ------------------------CS------------SSCEEEEEECTTSC-----EE-EEETTTEEEEEETTEEEEEC
T ss_pred ------------------------CC------------CCccceeEECCCCC-----EE-EEeCCceEEEecCCCCCeeE
Confidence 00 01122333344443 44 44467887777533344333
Q ss_pred EecC----CCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecC---CCCCeEEEEEc-CCceEEEE
Q psy467 317 TTEK----NSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPM---GWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 317 tl~g----h~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~---h~~~VtsVafS-dg~lLaaS 380 (845)
.+.. +...+.++++.+++.+++++...+| ++..+.|+....+.. ....+.++.|. ++++++++
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G 310 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILG 310 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEEC
T ss_pred eccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEc
Confidence 3321 2235889999998887777664435 456666766655542 34678899997 77777666
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.0011 Score=69.13 Aligned_cols=190 Identities=13% Similarity=0.117 Sum_probs=121.0
Q ss_pred cEEEEEcCCC--CCeEEEEEccCCCEEEEEECC--CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE-EeCCCc
Q psy467 91 TVQRTLNGHK--SSITSVDFHPYGDYLCSGSLD--SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS-GGEDGV 165 (845)
Q Consensus 91 ~~v~~l~~h~--~~V~~lafspdg~~Lasgs~D--G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las-gs~DG~ 165 (845)
+.+.++. |. .....+.|++ +.++.+.+.+ +.|+.+|+.+++.+..+..... ........+++.|.. .-.++.
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCE
Confidence 4556664 54 3467899986 5555566654 4899999999999988864332 322222333444443 445677
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
+.+ ||..+.+. +..+.....+
T Consensus 87 v~v-------------~D~~tl~~--------------------~~ti~~~~~G-------------------------- 107 (243)
T 3mbr_X 87 GFV-------------YDLATLTP--------------------RARFRYPGEG-------------------------- 107 (243)
T ss_dssp EEE-------------EETTTTEE--------------------EEEEECSSCC--------------------------
T ss_pred EEE-------------EECCcCcE--------------------EEEEeCCCCc--------------------------
Confidence 777 99998887 5555432222
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC---
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS--- 322 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~--- 322 (845)
+.++ +++. .|+++..++.|.++|..+.+.+.++.-..
T Consensus 108 ---------wglt--~dg~-----------------------------~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~ 147 (243)
T 3mbr_X 108 ---------WALT--SDDS-----------------------------HLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR 147 (243)
T ss_dssp ---------CEEE--ECSS-----------------------------CEEEECSSSEEEEECTTTCCEEEEEECEETTE
T ss_pred ---------eEEe--eCCC-----------------------------EEEEECCCCeEEEEeCCCCeEEEEEEEccCCc
Confidence 2232 2333 34444558899999999999888876421
Q ss_pred --CCEEEEEEeCCCCEEEEEe-CCC-EEEEEecCCceEEEecCC-------------CCCeEEEEEc-CCceEEEEEEEE
Q psy467 323 --STIRRLTFSEGGECLLGGD-TEG-LKVYGWEPARQYDAQPMG-------------WGKVQDLAVT-GTQLWFRRVGTW 384 (845)
Q Consensus 323 --~~VtslafSpdG~~Lasgs-~DG-I~IWDl~tgk~l~tl~~h-------------~~~VtsVafS-dg~lLaaSVsiW 384 (845)
..++.+.|. +|+ |.+.. .+. |.+.|..+++.+..+... ....++||++ +++.|.++-..|
T Consensus 148 ~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 148 PLDNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp ECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred ccccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 346677776 665 44444 344 999999999988776522 1357899999 555555553333
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00064 Score=82.35 Aligned_cols=140 Identities=11% Similarity=0.050 Sum_probs=89.0
Q ss_pred cEEEEEEe-cCCCCEEEEEeC-CC----eEEEEECCCC-eeEE-EecCCCCCeEEEEEcCCCCEEEEEECC-----CcEE
Q psy467 17 SVNCLALG-KKSGQVLATGGD-DK----KVNLWALGKS-NCIM-SLSGHSTPVESVQFGNGEETLSAGCQS-----GSIK 83 (845)
Q Consensus 17 ~V~~LafS-p~dg~~LaTgs~-DG----~I~IWdl~t~-~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~D-----GtV~ 83 (845)
.+...+|| | +|++||.+.. +| .|+++|+.++ +.+. .+. .....++|+|||+.|+....+ ..|.
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 68889999 9 8998886543 22 5999999988 6321 111 113467899999988877665 3688
Q ss_pred EEECCCCc--EEEEEc-CCCCCeEEEEEccCCCEEEEEEC---CCeEEEEECCCCc-eE--EEEc-CCCCCeEEEEEecC
Q psy467 84 IWNLAVPT--VQRTLN-GHKSSITSVDFHPYGDYLCSGSL---DSFIKLWDLRRKG-CI--YTYR-GHSKSINSIRFSPD 153 (845)
Q Consensus 84 VWDl~tg~--~v~~l~-~h~~~V~~lafspdg~~Lasgs~---DG~I~IWDl~t~~-~l--~~~~-~h~~~V~sLafSPd 153 (845)
++++.++. ....+. ........+.|+|||++|+..+. ...|.++|+.++. .. ..+. .......++.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~- 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG- 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-
Confidence 88988764 223332 22344667899999998877653 3468889997652 22 3333 2334455555543
Q ss_pred CCEEEEEe
Q psy467 154 GQWIASGG 161 (845)
Q Consensus 154 g~~Lasgs 161 (845)
|..|+..+
T Consensus 330 g~~l~~~t 337 (751)
T 2xe4_A 330 TSHLVILT 337 (751)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEe
Confidence 55444433
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0057 Score=66.92 Aligned_cols=153 Identities=12% Similarity=0.011 Sum_probs=100.3
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v 93 (845)
...+.+++|++.++.++++-...+.|..++.........+.........+++.+.+..|+ +-...+.|.+.+++.....
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 345789999984555666666778999999876654444443334567899998655554 4445678999998755444
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEE-CC-CeEEEEECCCCceEEEE-cCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGS-LD-SFIKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs-~D-G~I~IWDl~t~~~l~~~-~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
..+.........++++|.+..|+.+. .. +.|..+++... ....+ ...-.....++++|++..|+.+. ..+.|..
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 44443445678999999766666554 34 67888888643 33333 22334578999998777666554 3455666
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.91 E-value=0.0026 Score=71.82 Aligned_cols=148 Identities=11% Similarity=0.124 Sum_probs=93.6
Q ss_pred cEEEEEEec-CCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC-C----cEEEEECCCC
Q psy467 17 SVNCLALGK-KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS-G----SIKIWNLAVP 90 (845)
Q Consensus 17 ~V~~LafSp-~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D-G----tV~VWDl~tg 90 (845)
....|+++| +++. |+++...+.|+.+|..++...... ........++|++++++|+++... + .+.+.+. .+
T Consensus 138 ~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 457899997 2455 444444478999998776644433 355678999999999966666542 2 2333443 33
Q ss_pred cEE--EEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcC-CCCCeEEEEEecCCCEEEEEe-CCCc
Q psy467 91 TVQ--RTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKSINSIRFSPDGQWIASGG-EDGV 165 (845)
Q Consensus 91 ~~v--~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs-~DG~ 165 (845)
... ..+. .......++++| ++..+++-..++.|..++...+........ .......++|+|+|++|+.+. ..+.
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 221 2222 123356788999 666555555778999999986654222221 224578899999999655554 5567
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
|..
T Consensus 294 I~~ 296 (430)
T 3tc9_A 294 ILR 296 (430)
T ss_dssp EEE
T ss_pred EEE
Confidence 777
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.0048 Score=68.47 Aligned_cols=155 Identities=12% Similarity=0.025 Sum_probs=101.4
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE-EECCCcEEEEECCCCcE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA-GCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS-gs~DGtV~VWDl~tg~~ 92 (845)
....+..++|++.++.++++-...+.|..++.........+.........+++.+.+..|+. -...+.|.+.+++....
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 34567889999845666666667789999998766544444433345678899986555544 44467888888875544
Q ss_pred EEEEcCCCCCeEEEEEccCCCEEEEEEC-C-CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 93 QRTLNGHKSSITSVDFHPYGDYLCSGSL-D-SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 93 v~~l~~h~~~V~~lafspdg~~Lasgs~-D-G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
...+.........+++.|.+..|+.+.. . +.|..+++............-.....|+|+|++..|+.+. ..+.|..
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 4444434456789999997776666553 3 6788888864333333333344578999998776666554 3455666
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.005 Score=69.57 Aligned_cols=149 Identities=11% Similarity=0.074 Sum_probs=90.5
Q ss_pred cEEEEEEecC-CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC----c-EEEEECCCC
Q psy467 17 SVNCLALGKK-SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG----S-IKIWNLAVP 90 (845)
Q Consensus 17 ~V~~LafSp~-dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG----t-V~VWDl~tg 90 (845)
.-.+|+|+|+ +...|+.+...+.|+.++..++..... .........++|+++|+ |+.+...+ . +...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4678999983 233455554448899999877765544 33556789999999999 44444321 1 333333222
Q ss_pred cE-EEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEE-cC-CCCCeEEEEEecCCCEEEEEe-CCCc
Q psy467 91 TV-QRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTY-RG-HSKSINSIRFSPDGQWIASGG-EDGV 165 (845)
Q Consensus 91 ~~-v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~-h~~~V~sLafSPdg~~Lasgs-~DG~ 165 (845)
.. ...+. .......++++| ++.++++-..++.|+.+|..++.....+ .. .......++|+|++++|+.+. ..+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 11222 223456788999 6665555556788999998877653322 21 122335799999999665554 4566
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
|..
T Consensus 297 I~~ 299 (433)
T 4hw6_A 297 IYR 299 (433)
T ss_dssp EEE
T ss_pred EEE
Confidence 777
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.85 E-value=0.018 Score=61.74 Aligned_cols=154 Identities=10% Similarity=0.021 Sum_probs=98.6
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC----CeeEEEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECC
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGK----SNCIMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLA 88 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t----~~~i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~ 88 (845)
.-....+++|++.++.++++-..++.|..++... ......+.........+++.+.+..|+ +-...+.|.+.+++
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 3456789999984455566666678999999875 222222332334568899987555554 44557899999987
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC--CeEEEEECCCCceEEEE-cCCCCCeEEEEEecCCCEEEEEe-CCC
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD--SFIKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGG-EDG 164 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D--G~I~IWDl~t~~~l~~~-~~h~~~V~sLafSPdg~~Lasgs-~DG 164 (845)
.......+.........++++|.+..|+.+... +.|...++. +.....+ ...-.....+++++++..|+.+. ..+
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 554433343334567899999977766666543 688888875 3333333 22345678999999877766655 445
Q ss_pred cEEE
Q psy467 165 VVRI 168 (845)
Q Consensus 165 ~I~I 168 (845)
.|..
T Consensus 187 ~I~~ 190 (316)
T 1ijq_A 187 SISS 190 (316)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6777
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.85 E-value=0.02 Score=63.76 Aligned_cols=157 Identities=8% Similarity=-0.010 Sum_probs=103.5
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEE
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWN 86 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWD 86 (845)
......+.+|+|++.++.++++-...+.|..+++... .....+.........+++.+.+..|+ +-...+.|.+.+
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEe
Confidence 3445678999999855555556566788999988652 23333443455788999998555554 444578899999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-C
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-D 163 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-D 163 (845)
++.......+.........|++.|.+.+|+.... .+.|...++............-.....|++++++..|+.+.. .
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 9866554445434455789999997777766653 367888888644333333333456789999988777766653 4
Q ss_pred CcEEE
Q psy467 164 GVVRI 168 (845)
Q Consensus 164 G~I~I 168 (845)
+.|..
T Consensus 268 ~~I~~ 272 (400)
T 3p5b_L 268 HSISS 272 (400)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 56666
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.81 E-value=0.011 Score=63.97 Aligned_cols=137 Identities=11% Similarity=0.037 Sum_probs=82.4
Q ss_pred EEEEEeCCCeEEEEECCCCe--eEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcE-EEEEcCCCCCeEE
Q psy467 30 VLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTV-QRTLNGHKSSITS 105 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~-v~~l~~h~~~V~~ 105 (845)
+|+.+. ...|+.+++.... ....+. ....+..++|++.+..|.... ..+.|..+++..+.. ...+...-.....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 344443 3579999987653 222222 223567899998666555554 467899999876532 1222222234568
Q ss_pred EEEccCCCEEE-EEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC--CCcEEE
Q psy467 106 VDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE--DGVVRI 168 (845)
Q Consensus 106 lafspdg~~La-sgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~--DG~I~I 168 (845)
+++.+.+..|+ +-...+.|.++++............-.....++++|.+..|+.+.. .+.|..
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r 149 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIER 149 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEE
Confidence 88987555554 4446678999998754333333344556789999987666655542 345555
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00087 Score=81.20 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=68.7
Q ss_pred CeEEEEEc-CCCCEEEEEEC-CC----cEEEEECCCC-cEEE-EEcCCCCCeEEEEEccCCCEEEEEECC-----CeEEE
Q psy467 60 PVESVQFG-NGEETLSAGCQ-SG----SIKIWNLAVP-TVQR-TLNGHKSSITSVDFHPYGDYLCSGSLD-----SFIKL 126 (845)
Q Consensus 60 ~V~sLafS-pdg~~LaSgs~-DG----tV~VWDl~tg-~~v~-~l~~h~~~V~~lafspdg~~Lasgs~D-----G~I~I 126 (845)
.+...+|| |||++||.+.. +| +|+++|+.++ +.+. .+. .....++|+|||+.|+....+ ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99999886543 22 4999999988 6321 111 113467899999888777655 36888
Q ss_pred EECCCCce--EEEEc-CCCCCeEEEEEecCCCEEEEEeC
Q psy467 127 WDLRRKGC--IYTYR-GHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 127 WDl~t~~~--l~~~~-~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
+++.++.. ...+. ........+.|+|||++|+..+.
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~ 290 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ 290 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec
Confidence 89877642 22232 22334667899999999887653
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0082 Score=62.97 Aligned_cols=116 Identities=11% Similarity=0.136 Sum_probs=83.7
Q ss_pred EEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEEEEcC-CCCCeEEEEEccCCCEEEEEECCCeEEEEEC
Q psy467 52 MSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQRTLNG-HKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~~l~~-h~~~V~~lafspdg~~Lasgs~DG~I~IWDl 129 (845)
+.+.+-...+..++|+|+++.|+ +...++.|...|.. ++.++.+.. .......|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 34556667899999999876555 46678889999998 888887742 2356889999988877676667788999988
Q ss_pred CCCce---EEEEc------CCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 130 RRKGC---IYTYR------GHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 130 ~t~~~---l~~~~------~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..... +.... ..+.....++|+|+++.|+++.+.....+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i 146 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEV 146 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceE
Confidence 65442 22221 13445689999999888777776655555
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.18 Score=59.56 Aligned_cols=336 Identities=8% Similarity=-0.058 Sum_probs=167.0
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC--CCcEEEEECCCCcEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ--SGSIKIWNLAVPTVQ 93 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~--DGtV~VWDl~tg~~v 93 (845)
.....|++.+.+++++++-...+.|.+.+.+.......+...-.....|++.|.+.+|+.... .+.|...+++.....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 567899998845556666667789999998754433333344556789999997666666653 356777777643333
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeee
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~ 172 (845)
......-.....|++++++..|+.+. ..+.|...|+............-....+|++..+ ..+++-...+.|..
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~---- 238 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILA---- 238 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEE----
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEE----
Confidence 33333345578999999877776665 4567888888643322222212223345666544 33333334556666
Q ss_pred ccCCceeEEEECCCCccCCCCCC--CCCcceeec-CC----C-----------CeEEEEecCCCCCccceeeEeeecccc
Q psy467 173 HLTNTSIHVVDLSLVHPLGTPPP--QYTSSVPFS-HN----T-----------SLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 173 ~~~~~~I~vWDl~tg~~l~~~~~--~~i~svs~s-pd----g-----------~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
.|..+++....+.. .....+.+. +. + ..+......... .......-..
T Consensus 239 ---------~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~-----~~C~C~~g~~ 304 (619)
T 3s94_A 239 ---------CNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPF-----YQCACPTGVK 304 (619)
T ss_dssp ---------EESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTS-----EEEECCTTCC
T ss_pred ---------EECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCC-----ceEeCCchhe
Confidence 77766654322221 111222211 10 0 001110000000 0000000000
Q ss_pred cccc----cccchhhhhhccCCCceeEEEcCCCCcCCCCccc--ccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEE
Q psy467 235 ESED----QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCV--PVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWD 308 (845)
Q Consensus 235 ~~~~----~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~--~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWD 308 (845)
...+ ..+....+..........+.+.+... ..... .....+.+++|.+.+.. ++++-...+.|+.++
T Consensus 305 l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~---~~~~~~~~~l~~~~~ld~d~~~~~----ly~sD~~~~~I~r~~ 377 (619)
T 3s94_A 305 LLENGKTCKDGATELLLLARRTDLRRISLDTPDF---TDIVLQLEDIRHAIAIDYDPVEGY----IYWTDDEVRAIRRSF 377 (619)
T ss_dssp BCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTC---CCEECCCSCCSSEEEEEEETTTTE----EEEEETTTTEEEEEE
T ss_pred ecccCcccCCCCceEEEEEcccceEEEecCCCcc---ceeEEeccccCccEEEEEEcCCCe----EEEEeCCCCeEEEEE
Confidence 0000 00000000000001111111111110 00011 11234567888885441 555555678899998
Q ss_pred CCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC-C-EEEEEecCCceEEEe-cCCCCCeEEEEEc-CCceEE
Q psy467 309 LEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-G-LKVYGWEPARQYDAQ-PMGWGKVQDLAVT-GTQLWF 378 (845)
Q Consensus 309 l~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D-G-I~IWDl~tgk~l~tl-~~h~~~VtsVafS-dg~lLa 378 (845)
+........+...-.....++++..+..|+.+... + |.+.+++... ...+ ...-...+++++. ....|.
T Consensus 378 ~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly 450 (619)
T 3s94_A 378 IDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMY 450 (619)
T ss_dssp TTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEE
T ss_pred cCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEE
Confidence 87644333333333467889999866666666554 4 9888887543 3333 3344678999999 434444
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.027 Score=68.43 Aligned_cols=137 Identities=9% Similarity=0.001 Sum_probs=85.6
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCC----cEEEEEcCCCCCeE
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVP----TVQRTLNGHKSSIT 104 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg----~~v~~l~~h~~~V~ 104 (845)
+|+.+. ...|+..++........+. ....+..|+|++.+..|+... ..+.|..+++... .....+........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 444443 3468888887655444444 456688999998666665554 4678988998753 22334443445567
Q ss_pred EEEEccCCCEEEEE-ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC--CcEEE
Q psy467 105 SVDFHPYGDYLCSG-SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED--GVVRI 168 (845)
Q Consensus 105 ~lafspdg~~Lasg-s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D--G~I~I 168 (845)
.|++.+.++.|+.+ ...+.|.+.++........+...-.....|+++|.+.+|+..... +.|..
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~ 541 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 541 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEE
Confidence 89998877666555 456789999987544433333344568899999976666655432 44555
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.19 Score=59.35 Aligned_cols=154 Identities=7% Similarity=-0.002 Sum_probs=97.5
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee-EEEecCCCCCeEEEEEcCCCCEEEEE-ECCCcEEEEECCCCcE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC-IMSLSGHSTPVESVQFGNGEETLSAG-CQSGSIKIWNLAVPTV 92 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~-i~~l~~h~~~V~sLafSpdg~~LaSg-s~DGtV~VWDl~tg~~ 92 (845)
-....+|+|++.++.++++-...+.|..+++..... ...+...-.....+++.+.+..|+.+ ...+.|.+.+++....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 446789999984555555555567899999865432 23333333578999999966655555 4578999999985543
Q ss_pred EEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 93 QRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 93 v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
...+...-.....|++.|.+.+|+.+.. .+.|...++............-.....|+++++++.|+.+. ..+.|..
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 3333334445678999998767766653 35777777753333333333445678999999776666554 4456666
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.011 Score=67.71 Aligned_cols=151 Identities=14% Similarity=0.139 Sum_probs=94.2
Q ss_pred cEEEEEEecC-CCCEEEEEeCCCeEEEEECCCCeeEEEecCC---CCCeEEEEE-------cCCCCEEEEEECCC-----
Q psy467 17 SVNCLALGKK-SGQVLATGGDDKKVNLWALGKSNCIMSLSGH---STPVESVQF-------GNGEETLSAGCQSG----- 80 (845)
Q Consensus 17 ~V~~LafSp~-dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h---~~~V~sLaf-------Spdg~~LaSgs~DG----- 80 (845)
.-..|+|+|. .++++++....+.|++.|.+++......... ......|+| ++++++|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568999983 4555555555567999998877665544322 235899999 99999777766554
Q ss_pred --cEEEEECCC-CcEE-----EEEcCCCCCeEEEEEccCCCE-EEEEECCCeEEEEECC-------CCce----------
Q psy467 81 --SIKIWNLAV-PTVQ-----RTLNGHKSSITSVDFHPYGDY-LCSGSLDSFIKLWDLR-------RKGC---------- 134 (845)
Q Consensus 81 --tV~VWDl~t-g~~v-----~~l~~h~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~-------t~~~---------- 134 (845)
.|.+.+... +... ..+... .....++++|++.. +++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665443 2211 122211 23457789995544 5555577889999987 4543
Q ss_pred -EEE-Ec-CCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 135 -IYT-YR-GHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 135 -l~~-~~-~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
... +. ........++|+|+|++|+.+. ..+.|+.
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 112 22 2234467899999999655554 4556666
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.55 E-value=0.025 Score=61.00 Aligned_cols=152 Identities=7% Similarity=0.019 Sum_probs=98.1
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee-EEEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC-IMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~-i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~ 94 (845)
.+.+++|++.++.++++-...+.|..++...... ...+...-.....+++.+.+..|+ +-...+.|.+++++......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 4678999885566666666778999999876532 122222234567899987555554 44456889999987544333
Q ss_pred EEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 95 TLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 95 ~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
.+.........+++.|.+..|+.+.. .+.|...++............-.....+++++++..|+.+. ..+.|..
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 34344456789999997777766663 57888888763322222223334578999999777666654 4456666
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.023 Score=62.20 Aligned_cols=196 Identities=11% Similarity=0.223 Sum_probs=120.5
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccC----CC---EEEEEE-C--CCeEEEEECC-CCceEEE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPY----GD---YLCSGS-L--DSFIKLWDLR-RKGCIYT 137 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspd----g~---~Lasgs-~--DG~I~IWDl~-t~~~l~~ 137 (845)
....++.....+-+.+||+ +|+.+..+.. +.++.+..-|+ |+ ++++.. . +++|.+|++. ....+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 4456666677889999999 7999988863 56777777663 22 233333 3 5789999773 2223554
Q ss_pred EcC------CC-CCeEEEEE--ecC-CC-EEEEEeCCCcEEEeeeeccCCceeEEEECCC---CccCCCCCCCCCcceee
Q psy467 138 YRG------HS-KSINSIRF--SPD-GQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSL---VHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 138 ~~~------h~-~~V~sLaf--SPd-g~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t---g~~l~~~~~~~i~svs~ 203 (845)
+.. .. ..+..+++ +|. +. ++++...+|.+.. |++.. +..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q-------------~~l~~~~~g~~-------------- 168 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQ-------------YELKADKNGYI-------------- 168 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEE-------------EEEEECTTSCE--------------
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEE-------------EEEEeCCCCcc--------------
Confidence 421 11 45666777 664 44 6777888888888 77632 211
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
.++.+..+..... + ..+...+...
T Consensus 169 --~~~lVR~f~lgsq--------~---------------------------EgcvvDd~~g------------------- 192 (355)
T 3amr_A 169 --SGKKVRAFKMNSQ--------T---------------------------EGMAADDEYG------------------- 192 (355)
T ss_dssp --EEEEEEEEECSSC--------E---------------------------EEEEEETTTT-------------------
T ss_pred --cceEEEEecCCCC--------c---------------------------ceEEEcCCCC-------------------
Confidence 0111222221111 1 3344444433
Q ss_pred cCCCCcccceEEEEEeCCCeEEEEECC-----CCeEEEEec-CC-CCCEEEEEE--eCCCC-EEEEEeC-CC-EEEEEec
Q psy467 284 LPQSPMLCFILTTSSSADRTVNFWDLE-----KFSLVSTTE-KN-SSTIRRLTF--SEGGE-CLLGGDT-EG-LKVYGWE 351 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~DG~I~IWDl~-----s~~~l~tl~-gh-~~~Vtslaf--SpdG~-~Lasgs~-DG-I~IWDl~ 351 (845)
.|..+-.+.-|..||.+ +++.+..+. ++ ...+..|++ .++|+ +|++++. +. +.+||.+
T Consensus 193 ----------~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 193 ----------RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ----------EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ----------eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 78888888778888865 456666653 22 236888888 45666 7777664 44 9999997
Q ss_pred -CCceEEEec
Q psy467 352 -PARQYDAQP 360 (845)
Q Consensus 352 -tgk~l~tl~ 360 (845)
+.+.+..+.
T Consensus 263 ~~~~~vg~f~ 272 (355)
T 3amr_A 263 GKNKYVADFR 272 (355)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEEE
Confidence 667777764
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.28 Score=57.98 Aligned_cols=132 Identities=8% Similarity=0.008 Sum_probs=85.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEec-CCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEEEcCCCCCeEEE
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRTLNGHKSSITSV 106 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~l~~h~~~V~~l 106 (845)
.+|+.+ ..+.|+..++++......+. ..-..+..|+|++.+..|+.+. .++.|..++++.......+.........+
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 345554 34689999997655433332 1234688999999777766554 47889999987654444444333456788
Q ss_pred EEccCCCEEEEE-ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 107 DFHPYGDYLCSG-SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 107 afspdg~~Lasg-s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
++.+.+..|+.+ ...+.|.+.++........+...-.....|+++|...+|+...
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD 141 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTE 141 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeC
Confidence 998766656554 4567899999865433333333445678999998655555544
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.1 Score=63.44 Aligned_cols=158 Identities=8% Similarity=-0.017 Sum_probs=102.8
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCCeEEEEEcCCCCEEEEE-ECCCcEEEE
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTPVESVQFGNGEETLSAG-CQSGSIKIW 85 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~V~sLafSpdg~~LaSg-s~DGtV~VW 85 (845)
+......+.+|+|++.++.++++-...+.|+.+++... .....+.........|++.+.+..|+.+ ...+.|.+.
T Consensus 419 l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~ 498 (791)
T 3m0c_C 419 LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 498 (791)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEE
Confidence 33345668899999855556666666788999988652 2233344344567789999877655555 447889999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE- 162 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~- 162 (845)
+++.......+.........|++.|.+.+|+.+.. .+.|...++........+...-.....|++++.+..|+.+..
T Consensus 499 ~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 499 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 99855544444434456789999998777776653 267888888644433333333456889999987776666543
Q ss_pred CCcEEE
Q psy467 163 DGVVRI 168 (845)
Q Consensus 163 DG~I~I 168 (845)
.+.|..
T Consensus 579 ~~~I~~ 584 (791)
T 3m0c_C 579 LHSISS 584 (791)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 345655
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.077 Score=57.91 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=62.5
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE--EEEEc---CCCCCeEEEEEccC---CCEEEEEEC-C-----Ce
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV--QRTLN---GHKSSITSVDFHPY---GDYLCSGSL-D-----SF 123 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~--v~~l~---~h~~~V~~lafspd---g~~Lasgs~-D-----G~ 123 (845)
-.....++|.|+|+++++ ..+|.|.+++ +++. +..+. ........|+|+|+ +..|+++.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 345789999999985555 5679999998 4442 22221 12346789999998 556655443 2 57
Q ss_pred EEEEECCCCc-----eE-EEEc---CCCCCeEEEEEecCCCEEEEEe
Q psy467 124 IKLWDLRRKG-----CI-YTYR---GHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 124 I~IWDl~t~~-----~l-~~~~---~h~~~V~sLafSPdg~~Lasgs 161 (845)
|..|+...+. .+ ..+. ........++|.|||.+.++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 8888876432 11 1132 1112346789999987655543
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.046 Score=59.72 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=66.7
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEec---CCCCCeEEEEEcCC---CCEEEEEEC
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSLS---GHSTPVESVQFGNG---EETLSAGCQ 78 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~---~h~~~V~sLafSpd---g~~LaSgs~ 78 (845)
++..+...-..-.+|+|.| +|++++ +..+|.|.+++ +++. +..+. ........|+|+|+ +..|..+..
T Consensus 22 ~~~~va~~l~~P~~ia~~p-dG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 22 RVEEVVGGLEVPWALAFLP-DGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp CEEEEECCCSCEEEEEECT-TSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEEEEECCCCCceEEEEcC-CCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 4445554455678999999 888555 45679999998 4432 22221 12456899999998 555554433
Q ss_pred -C-----CcEEEEECCCCc-----EE-EEEc---CCCCCeEEEEEccCCCEEEEE
Q psy467 79 -S-----GSIKIWNLAVPT-----VQ-RTLN---GHKSSITSVDFHPYGDYLCSG 118 (845)
Q Consensus 79 -D-----GtV~VWDl~tg~-----~v-~~l~---~h~~~V~~lafspdg~~Lasg 118 (845)
. +.|..|+...+. .+ ..+. ........++|.|||.+.++.
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 2 678888877542 11 2233 111234689999999766554
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=97.27 E-value=0.4 Score=60.71 Aligned_cols=114 Identities=9% Similarity=-0.012 Sum_probs=73.7
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE--EEecCCCCCeEEEEEcCC------CCEEEEEEC-CCcEEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI--MSLSGHSTPVESVQFGNG------EETLSAGCQ-SGSIKIWN 86 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i--~~l~~h~~~V~sLafSpd------g~~LaSgs~-DGtV~VWD 86 (845)
..|.+.+.+ +.+++.+. .+.+.++.+.+++.. .... -...|.|+++.+. +++++.|.. |++|+|++
T Consensus 514 ~~I~~As~n---~~~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 514 KNISVASCN---SSQVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCCEEEEC---SSEEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred CEEEEEEeC---CCEEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 356666654 35666665 578888887655432 2222 3568999999863 479999997 99999999
Q ss_pred CCCCcEEEEEcC-CCCCeEEEEEcc--CCCEEEEEECCCeEEEEEC--CCCce
Q psy467 87 LAVPTVQRTLNG-HKSSITSVDFHP--YGDYLCSGSLDSFIKLWDL--RRKGC 134 (845)
Q Consensus 87 l~tg~~v~~l~~-h~~~V~~lafsp--dg~~Lasgs~DG~I~IWDl--~t~~~ 134 (845)
+.+.+.+....- ......++.+.. ...+|..|-.||.+..+.+ .++..
T Consensus 589 L~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l 641 (1158)
T 3ei3_A 589 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLL 641 (1158)
T ss_dssp TTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCE
T ss_pred CCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcc
Confidence 998776654332 112334444332 3357889999998866655 34443
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.11 Score=58.41 Aligned_cols=106 Identities=12% Similarity=0.091 Sum_probs=62.5
Q ss_pred CeEEEEEcCC--CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC-----eEEEEECCCC
Q psy467 60 PVESVQFGNG--EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS-----FIKLWDLRRK 132 (845)
Q Consensus 60 ~V~sLafSpd--g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG-----~I~IWDl~t~ 132 (845)
....++|+|+ +..|..+...+.|+.+|..++...... ........++|+++|+ |+++...+ .+...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4678999984 455655544489999999877655443 3455688999999999 55554322 1333332211
Q ss_pred ce-EEEEcCCCCCeEEEEEec-CCCEEEEEeCCCcEEE
Q psy467 133 GC-IYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168 (845)
Q Consensus 133 ~~-l~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I 168 (845)
.. ...+. .-.....++++| +|.++++-..++.|+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~ 254 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISS 254 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEE
Confidence 11 01111 223456678888 5555545445566666
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.19 Score=53.91 Aligned_cols=145 Identities=12% Similarity=0.149 Sum_probs=82.8
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec---CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS---GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~---~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
...+.+|.|++ +..++ ++.++.|.. ..+.++.-.... .+...+..+.+.+++..++++ .+|.|.. ..+.|+
T Consensus 79 ~~~~~~i~~~~--~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQG--NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGK 152 (327)
T ss_dssp CCEEEEEEEET--TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTS
T ss_pred CccEEEEEecC--CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCC
Confidence 45789999975 34444 455665543 333344333322 233567888887777666655 4564422 223343
Q ss_pred EEEE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEEC--CCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 92 VQRT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL--RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 92 ~v~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl--~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.-.. .......+..+.+.+++.+++++...+..+-+|- .+.+.+. ......+..+.+.+++..+ .++.+|.++.
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~ 229 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAF 229 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEE
Confidence 3322 2345567899999999887766644333333442 2223331 2345678889999888755 4456777666
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0042 Score=73.82 Aligned_cols=117 Identities=14% Similarity=0.129 Sum_probs=67.3
Q ss_pred cEEEEEEecCCCCEEEEEeC-CCeEEEEECCCCeeEEEecCCCC-CeEEEEEcCCCCEEEEEE-CC-----CcEEEEECC
Q psy467 17 SVNCLALGKKSGQVLATGGD-DKKVNLWALGKSNCIMSLSGHST-PVESVQFGNGEETLSAGC-QS-----GSIKIWNLA 88 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~~h~~-~V~sLafSpdg~~LaSgs-~D-----GtV~VWDl~ 88 (845)
...++++.. ++.++++|+. +..+.+||..+.+-...-..+.. .-.+++..++++.++.|+ .+ ..+.+||..
T Consensus 244 ~~~~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 244 FCPGISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SSCEEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred ccccccCCC-CCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 344567777 8899999884 45899999876643322111111 123455667899999988 34 579999998
Q ss_pred CCcEEEEEcCC-----CCCeEEEEEccCCCEEEEEECCC---------eEEEEECCCCceE
Q psy467 89 VPTVQRTLNGH-----KSSITSVDFHPYGDYLCSGSLDS---------FIKLWDLRRKGCI 135 (845)
Q Consensus 89 tg~~v~~l~~h-----~~~V~~lafspdg~~Lasgs~DG---------~I~IWDl~t~~~l 135 (845)
+++... +... ...-....+..++..++.|+.+| .+..||..+....
T Consensus 323 t~~W~~-~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~ 382 (656)
T 1k3i_A 323 SKTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV 382 (656)
T ss_dssp TTEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE
T ss_pred CCccee-CCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCccee
Confidence 876433 2100 00000011223455555555443 5678888766543
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.02 Score=64.48 Aligned_cols=60 Identities=10% Similarity=0.105 Sum_probs=43.2
Q ss_pred CeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC
Q psy467 102 SITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 102 ~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
....++++| ++..|+++...+.|+.+|+..+.... +.........++|+++|++|+++..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~ 198 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITND 198 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEEC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeC
Confidence 346899998 46667777666889999998665443 3334556889999999996666554
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.27 Score=55.13 Aligned_cols=125 Identities=11% Similarity=0.203 Sum_probs=85.1
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CcEEEEEcC
Q psy467 20 CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV-PTVQRTLNG 98 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t-g~~v~~l~~ 98 (845)
+.-.+| ..+.+|.=. ..++.|+|+++...++...- ...|.-=.|-.+ +.|+.. .+..|.-|+++. ..+++.+..
T Consensus 70 sAIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~-~~l~lV-T~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 70 SAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALV-TDNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp EEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEET-TEEEEE-CSSEEEEEESSSSCCCEEEEEC
T ss_pred eeeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCC-CeEEEE-cCCeeEEecccCCCCchhheec
Confidence 345567 667777665 56999999999999888874 445666677643 455555 467899999974 356666654
Q ss_pred C----CCCeEEEEEccCCCEEEEEE-------CCCeEEEEECCCCceEEEEcCCCCCeEEEEE
Q psy467 99 H----KSSITSVDFHPYGDYLCSGS-------LDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150 (845)
Q Consensus 99 h----~~~V~~lafspdg~~Lasgs-------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLaf 150 (845)
| ...|..-..+++.++++..+ -.|.+.+|..+. +.-+.+.+|......+..
T Consensus 145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~ 206 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKM 206 (494)
T ss_dssp CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEEC
T ss_pred chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEec
Confidence 4 34567777788889887543 246789999874 455667777654443333
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.21 Score=54.54 Aligned_cols=111 Identities=10% Similarity=0.015 Sum_probs=67.4
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-eEEEec---CCCCCeEEEEEcCC---CCEEEEEEC
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-CIMSLS---GHSTPVESVQFGNG---EETLSAGCQ 78 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-~i~~l~---~h~~~V~sLafSpd---g~~LaSgs~ 78 (845)
+++..+...-..-.+|+|.| +|+++ ++..+|.|.+++ .+++ .+..+. ........|+|+|+ +..|.++..
T Consensus 19 ~~~~~va~~l~~P~~ia~~p-dG~l~-V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 19 FKISEVASDLEVPWSIAPLG-GGRYL-VTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp EEEEEEECSCSCEEEEEEEE-TTEEE-EEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred eEEEEEeCCCCCCeEEEEcC-CCeEE-EEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 34555554456788999999 88744 456669999997 3454 222221 12356899999997 455544433
Q ss_pred ----C----CcEEEEECCCC--c-----EE-EEEcC-CCCCeEEEEEccCCCEEEEEE
Q psy467 79 ----S----GSIKIWNLAVP--T-----VQ-RTLNG-HKSSITSVDFHPYGDYLCSGS 119 (845)
Q Consensus 79 ----D----GtV~VWDl~tg--~-----~v-~~l~~-h~~~V~~lafspdg~~Lasgs 119 (845)
+ +.|..|+.... . .+ ..+.. .......++|.|||.+.++.+
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 2 56888887654 1 11 11221 112246799999998666643
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.021 Score=61.89 Aligned_cols=157 Identities=10% Similarity=0.125 Sum_probs=106.5
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE-ecC----CC--CCeEEEEE---cCCCCEEEEEEC--
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS-LSG----HS--TPVESVQF---GNGEETLSAGCQ-- 78 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~-l~~----h~--~~V~sLaf---Spdg~~LaSgs~-- 78 (845)
+.....--.+++|++.++.++++.-..++|..|+...+..... +.+ .. ..+..|.| .|++.++++...
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 4444444567899884444444444789999999875543333 222 11 13689999 688777775431
Q ss_pred -----------CCcEEEEECC---CCcEEEEEcC-------------CCCCeEEEEEccCCCEEEEEECC-CeEEEEECC
Q psy467 79 -----------SGSIKIWNLA---VPTVQRTLNG-------------HKSSITSVDFHPYGDYLCSGSLD-SFIKLWDLR 130 (845)
Q Consensus 79 -----------DGtV~VWDl~---tg~~v~~l~~-------------h~~~V~~lafspdg~~Lasgs~D-G~I~IWDl~ 130 (845)
+..|..+|+. +++.+....- .......++..++|+..++++.. +.|...+..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 5779999999 7776655531 11247899999999999998888 887777765
Q ss_pred CCceEEEEc------CCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 131 RKGCIYTYR------GHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 131 t~~~l~~~~------~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.. .+..+. ......+.|+++|+|+.|++...+|.+..
T Consensus 168 G~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~ 210 (334)
T 2p9w_A 168 GK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTA 210 (334)
T ss_dssp SC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEE
T ss_pred CC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEE
Confidence 33 333221 11223679999999999988877898988
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0014 Score=78.80 Aligned_cols=122 Identities=9% Similarity=0.030 Sum_probs=70.4
Q ss_pred CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCC----CcEEEEEcCCCCCeEEEEEccC
Q psy467 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAV----PTVQRTLNGHKSSITSVDFHPY 111 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~t----g~~v~~l~~h~~~V~~lafspd 111 (845)
.+.|+..++.+.+....+. ....+..|+|++.+..|+.+. ..+.|..+++.. ......+.........|++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 3578888887665544333 334567899998777776654 357899999875 2222222212223456788755
Q ss_pred CCEE-EEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 112 GDYL-CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 112 g~~L-asgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
+..| ++-...+.|.++++........+.........++++|.+.+|+.
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~ 512 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYW 512 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEE
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEE
Confidence 4444 44445678999988754433333322344667788876554443
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.095 Score=57.28 Aligned_cols=137 Identities=10% Similarity=0.184 Sum_probs=93.9
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCC----CC---EEEEEEC---CCcEEEEECC--CCcEEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG----EE---TLSAGCQ---SGSIKIWNLA--VPTVQR 94 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpd----g~---~LaSgs~---DGtV~VWDl~--tg~~v~ 94 (845)
...+++.....+-+.+||+ +|+.+..+.. ..++.+..-|+ |+ ++++... +++|.+|++. ++. +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3456666667788999999 8888888863 56777777663 22 2333333 5789999773 443 55
Q ss_pred EEcC------CC-CCeEEEEE--ccC-CC-EEEEEECCCeEEEEECC-------CCceEEEEcCCCCCeEEEEEecCCCE
Q psy467 95 TLNG------HK-SSITSVDF--HPY-GD-YLCSGSLDSFIKLWDLR-------RKGCIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 95 ~l~~------h~-~~V~~laf--spd-g~-~Lasgs~DG~I~IWDl~-------t~~~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
.+.. .. ..+..+++ +|. ++ ++++...+|.+..|++. +.+.++++.. .+.+-.+...+....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 5521 11 45566777 664 44 68888889999999882 3356677764 457889999998889
Q ss_pred EEEEeCCCcEEE
Q psy467 157 IASGGEDGVVRI 168 (845)
Q Consensus 157 Lasgs~DG~I~I 168 (845)
|+.+-++.-|..
T Consensus 194 Lyv~eEd~GIw~ 205 (355)
T 3amr_A 194 LYIAEEDEAIWK 205 (355)
T ss_dssp EEEEETTTEEEE
T ss_pred EEEecccceEEE
Confidence 999988865544
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.61 Score=50.81 Aligned_cols=102 Identities=15% Similarity=0.150 Sum_probs=62.0
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc-EEEEEc---CCCCCeEEEEEccC---CCEEEEEEC----C----C
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT-VQRTLN---GHKSSITSVDFHPY---GDYLCSGSL----D----S 122 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~-~v~~l~---~h~~~V~~lafspd---g~~Lasgs~----D----G 122 (845)
-.....|+|.|+|+++++ ..+|.|.+++. +++ .+..+. ........|+++|+ +..|+++.. + .
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 446789999999985554 56799999973 454 222221 12345789999998 555655443 3 5
Q ss_pred eEEEEECCCC--c-----eE-EEEcC-CCCCeEEEEEecCCCEEEEEe
Q psy467 123 FIKLWDLRRK--G-----CI-YTYRG-HSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 123 ~I~IWDl~t~--~-----~l-~~~~~-h~~~V~sLafSPdg~~Lasgs 161 (845)
.|..|+.... . .+ ..+.. .......|+|.|||.+.++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 6778877643 1 11 11221 112346688999887665543
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.039 Score=58.03 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=55.6
Q ss_pred CCCEEEEEe-CC-----CeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCc--
Q psy467 27 SGQVLATGG-DD-----KKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS-----GSIKIWNLAVPT-- 91 (845)
Q Consensus 27 dg~~LaTgs-~D-----G~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D-----GtV~VWDl~tg~-- 91 (845)
++.+++.|+ .+ ..+.+||..+.+-... +........++. .++..++.|+.+ ..+.+||..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 456667776 33 3688899877653221 111111122222 356667777654 468999998766
Q ss_pred -EEEE--EcCCCCCeEEEEEccCCCEEEEEECC-----CeEEEEECCCCce
Q psy467 92 -VQRT--LNGHKSSITSVDFHPYGDYLCSGSLD-----SFIKLWDLRRKGC 134 (845)
Q Consensus 92 -~v~~--l~~h~~~V~~lafspdg~~Lasgs~D-----G~I~IWDl~t~~~ 134 (845)
-... +....... +++. -+++.++.|+.+ ..+.+||+.+.+-
T Consensus 92 ~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLA-GATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp CCEEECCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred eeEECCCCCCCccce-eEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 3322 11111112 2222 256666777644 3588899877653
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.82 Score=51.24 Aligned_cols=247 Identities=10% Similarity=0.113 Sum_probs=150.0
Q ss_pred CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE
Q psy467 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC 116 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La 116 (845)
+..|.|.|+.++..+.+-.- .-.+.-.+|..+.||.-. ..++.|+|+++...++.+.-.+ .|..=.|-.+. .|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~-~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-EEE
T ss_pred CCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCC-eEE
Confidence 34788899887655433221 112344678877777765 7899999999999888887444 56666776544 455
Q ss_pred EEECCCeEEEEECCC-CceEEEEcCC----CCCeEEEEEecCCCEEEEEe---CCCcEEEeeeeccCCceeEEEECCCCc
Q psy467 117 SGSLDSFIKLWDLRR-KGCIYTYRGH----SKSINSIRFSPDGQWIASGG---EDGVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 117 sgs~DG~I~IWDl~t-~~~l~~~~~h----~~~V~sLafSPdg~~Lasgs---~DG~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
..+ +..|+-|++.. ..+...+..| ...|.....+++.+|++..+ .++.+ .+.+.+|..+.+.
T Consensus 121 lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v---------~G~mQLYS~er~~ 190 (494)
T 1bpo_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV---------VGAMQLYSVDRKV 190 (494)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEE---------EEEEEEEESTTCC
T ss_pred EEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcc---------cceEEEeeccccc
Confidence 444 46799999964 3455555543 45678888899999987554 23322 2345558877554
Q ss_pred cCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCC
Q psy467 189 PLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268 (845)
Q Consensus 189 ~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~ 268 (845)
. ..+.+|... . ..+..++..
T Consensus 191 s---------------------Q~ieGhaa~-------F-----------------------------~~~~~~g~~--- 210 (494)
T 1bpo_A 191 S---------------------QPIEGHAAS-------F-----------------------------AQFKMEGNA--- 210 (494)
T ss_dssp E---------------------EEECCSEEE-------E-----------------------------EEEECTTCS---
T ss_pred c---------------------chheeeeee-------e-----------------------------EEEecCCCC---
Confidence 3 334444332 1 111122210
Q ss_pred CcccccccCceeEEEcCCCCcccceEEEEEeC---CCeEEEEECCCC---------eEEEEec---CCCCCEEEEEEeCC
Q psy467 269 GTCVPVSVSRTSLSILPQSPMLCFILTTSSSA---DRTVNFWDLEKF---------SLVSTTE---KNSSTIRRLTFSEG 333 (845)
Q Consensus 269 ~~~~~~~~~I~slafSPdg~~~~~~lLatgs~---DG~I~IWDl~s~---------~~l~tl~---gh~~~VtslafSpd 333 (845)
.+.. +++.+.. .+.++|.++... +.+..+- ...+--.++..|+.
T Consensus 211 -------~~~~--------------lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~k 269 (494)
T 1bpo_A 211 -------EEST--------------LFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK 269 (494)
T ss_dssp -------SEEE--------------EEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETT
T ss_pred -------CCce--------------EEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEeccc
Confidence 0000 2222221 257777777432 1111111 12445678899998
Q ss_pred CCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc--CCceEEEE
Q psy467 334 GECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 334 G~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS--dg~lLaaS 380 (845)
-..++.-+.-| |++||++++.++..-+-....|..-+-+ .+..+++.
T Consensus 270 ygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vn 319 (494)
T 1bpo_A 270 HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN 319 (494)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEc
Confidence 88999999999 9999999999998777666666555544 34444433
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0022 Score=77.00 Aligned_cols=153 Identities=9% Similarity=-0.008 Sum_probs=88.4
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCC----CeeEEEecCCCCCeEEEEEcCCCCEE-EEEECCCcEEEEECCCC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGK----SNCIMSLSGHSTPVESVQFGNGEETL-SAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t----~~~i~~l~~h~~~V~sLafSpdg~~L-aSgs~DGtV~VWDl~tg 90 (845)
..+.+|+|++..+.++++-...+.|..+++.+ ......+.........|++.+.+..| ++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 45678899883444444445567899998865 22222222122335667887644444 44445688999998865
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEE
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVR 167 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~ 167 (845)
.....+.........+++.|.+.+|+.+.. .+.|..+++............-.....|+|+|++..|+.+. ..+.|.
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 444444333345678899997666655543 26788877753222222222233467899998765555443 455666
Q ss_pred E
Q psy467 168 I 168 (845)
Q Consensus 168 I 168 (845)
.
T Consensus 566 ~ 566 (699)
T 1n7d_A 566 S 566 (699)
T ss_dssp E
T ss_pred E
Confidence 6
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=1.3 Score=52.32 Aligned_cols=150 Identities=4% Similarity=-0.110 Sum_probs=96.7
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC--CCcEEEEECCCCcEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ--SGSIKIWNLAVPTVQ 93 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~--DGtV~VWDl~tg~~v 93 (845)
.....|++.+.++++.++-...+.|.+.+++.......+...-.....|++.|...+|..... .+.|...+++.....
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 356788888745666666666788999998654433333344556799999996666666553 467888888754433
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..+. .-.....|++++++..|+.+. ..+.|...|+..... ..+...-....++++.. +..+++-...+.|..
T Consensus 160 ~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 160 TLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIER 232 (628)
T ss_dssp EEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEE
T ss_pred EEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEE
Confidence 3333 445678999999887777665 457899999865433 23333334556777764 333444444666766
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.23 Score=53.84 Aligned_cols=115 Identities=8% Similarity=0.089 Sum_probs=78.6
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEE-EcC----CCC--CeEEEEE---ccCCCEEEEEE---
Q psy467 54 LSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRT-LNG----HKS--SITSVDF---HPYGDYLCSGS--- 119 (845)
Q Consensus 54 l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~-l~~----h~~--~V~~laf---spdg~~Lasgs--- 119 (845)
+......-.+++|++....|..++ ..++|..|+...+..... +.. ... .+..+.| .|+++++++..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 344455567889988666666666 689999999986644333 222 111 3578999 68877776544
Q ss_pred ----------CCCeEEEEECC---CCceEEEEcC-------------CCCCeEEEEEecCCCEEEEEeCC-CcEEE
Q psy467 120 ----------LDSFIKLWDLR---RKGCIYTYRG-------------HSKSINSIRFSPDGQWIASGGED-GVVRI 168 (845)
Q Consensus 120 ----------~DG~I~IWDl~---t~~~l~~~~~-------------h~~~V~sLafSPdg~~Lasgs~D-G~I~I 168 (845)
.+..|..+|+. +++.+....- .......++..++|+..++++.. +.|..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~r 163 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIAR 163 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEE
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEE
Confidence 26779999998 7777655431 11247889999999988888766 66544
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.31 Score=53.05 Aligned_cols=147 Identities=11% Similarity=0.067 Sum_probs=80.1
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEe-------cCCCCCeEEEEEcCC---CCEEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-------SGHSTPVESVQFGNG---EETLSAGC 77 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l-------~~h~~~V~sLafSpd---g~~LaSgs 77 (845)
+..+...-..-+.|+|.| +|+.|+++...|.|++++.. +.....+ .........|+|+|+ +..|..+.
T Consensus 10 ~~~va~~l~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 10 VEVLQDKLDHPWALAFLP-DNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp EEEEEEEESSEEEEEECS-TTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred EEEEECCCCCcEEEEEcC-CCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 334433344678999999 88834455567999999853 3321111 112346789999996 45444442
Q ss_pred -C-------CCcEEEEECCCC--c--EEEE-EcC------CCCCeEEEEEccCCCEEEEEEC-------------CCeEE
Q psy467 78 -Q-------SGSIKIWNLAVP--T--VQRT-LNG------HKSSITSVDFHPYGDYLCSGSL-------------DSFIK 125 (845)
Q Consensus 78 -~-------DGtV~VWDl~tg--~--~v~~-l~~------h~~~V~~lafspdg~~Lasgs~-------------DG~I~ 125 (845)
. ...|..|++..+ . .... +.. .......|+|.|||.+.++.+. .|.|.
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ 167 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLV 167 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEE
T ss_pred eCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEE
Confidence 2 235666776533 1 1111 111 1112357999999965555432 24576
Q ss_pred EEECCCC--------------ceEEEEcCCCCCeEEEEEec-CCCEEE
Q psy467 126 LWDLRRK--------------GCIYTYRGHSKSINSIRFSP-DGQWIA 158 (845)
Q Consensus 126 IWDl~t~--------------~~l~~~~~h~~~V~sLafSP-dg~~La 158 (845)
-++.... ..+... ++ .....++|+| +|++++
T Consensus 168 ri~~dG~~p~~npf~~~~~~~~~i~a~-G~-rnp~gl~~d~~~g~l~~ 213 (353)
T 2g8s_A 168 RLTDQGEIPDDNPFIKESGVRAEIWSY-GI-RNPQGMAMNPWSNALWL 213 (353)
T ss_dssp EEETTSCCCTTCTTTTSTTSCTTEEEE-CC-SEEEEEEEETTTTEEEE
T ss_pred EECCCCCCCCCCCCcCCCCCCccEEEE-cC-cCccceEEECCCCCEEE
Confidence 6676422 111111 22 3467899999 454433
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.2 Score=52.49 Aligned_cols=105 Identities=10% Similarity=0.169 Sum_probs=54.9
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCcEEEE
Q psy467 27 SGQVLATGGDD----KKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS-----GSIKIWNLAVPTVQRT 95 (845)
Q Consensus 27 dg~~LaTgs~D----G~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D-----GtV~VWDl~tg~~v~~ 95 (845)
++.+++.|+.+ ..+..||..+.+-... +......-..+.+ ++..++.|+.+ ..+.+||..+.+-...
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 34566666643 3588899877653222 1111111122222 56667777654 4588999987753332
Q ss_pred EcCCCCC-eEEEEEccCCCEEEEEECCC-----eEEEEECCCCce
Q psy467 96 LNGHKSS-ITSVDFHPYGDYLCSGSLDS-----FIKLWDLRRKGC 134 (845)
Q Consensus 96 l~~h~~~-V~~lafspdg~~Lasgs~DG-----~I~IWDl~t~~~ 134 (845)
-...... -.+++. -++..++.|+.++ .+.+||+.+.+-
T Consensus 93 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 93 ANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp CCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeE
Confidence 2111111 112222 2566777777553 477888876653
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=96.48 E-value=1.4 Score=55.77 Aligned_cols=151 Identities=12% Similarity=0.099 Sum_probs=83.7
Q ss_pred CCcEEEEEEecC-----CCCEEEEEeC-CCeEEEEECCCCeeEEEecC-CCCCeEEEEEc--CCCCEEEEEECCCcEEEE
Q psy467 15 GASVNCLALGKK-----SGQVLATGGD-DKKVNLWALGKSNCIMSLSG-HSTPVESVQFG--NGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 15 ~~~V~~LafSp~-----dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~~-h~~~V~sLafS--pdg~~LaSgs~DGtV~VW 85 (845)
...|.|+++.+. .++++|+|.. |++|+|+++.+.+.+....- ......++.+. ....+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 568999999762 2479999996 99999999987766543321 12344444443 234578899999998666
Q ss_pred ECC--CCcEEEE--EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeE-EEEEecC--CCEEE
Q psy467 86 NLA--VPTVQRT--LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN-SIRFSPD--GQWIA 158 (845)
Q Consensus 86 Dl~--tg~~v~~--l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~-sLafSPd--g~~La 158 (845)
.++ +|..... ..-...++.-..+...+..-+.+..+....++.-+ ++....--.. ..+. ...|+.. ..-++
T Consensus 633 ~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~l~~-~~v~~~~~F~se~~~~g~v 710 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSNVNL-KEVNYMCPLNSDGYPDSLA 710 (1158)
T ss_dssp EECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEEBSS-SCCCEEEEECCSSSTTEEE
T ss_pred EEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEeccCh-HHhceEeccCcccCCCcEE
Confidence 554 4544321 22224466655565555443334445555555443 3333221111 2233 3345432 23344
Q ss_pred EEeCCCcEEE
Q psy467 159 SGGEDGVVRI 168 (845)
Q Consensus 159 sgs~DG~I~I 168 (845)
..+ ++.++|
T Consensus 711 ~~~-~~~LrI 719 (1158)
T 3ei3_A 711 LAN-NSTLTI 719 (1158)
T ss_dssp EEC-SSCEEE
T ss_pred EEc-CCceEE
Confidence 443 455888
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.43 Score=50.07 Aligned_cols=104 Identities=11% Similarity=0.047 Sum_probs=56.4
Q ss_pred CCEEEEEeC--CCeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC----CcEEEEECCCCcEEEEEcCC
Q psy467 28 GQVLATGGD--DKKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS----GSIKIWNLAVPTVQRTLNGH 99 (845)
Q Consensus 28 g~~LaTgs~--DG~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D----GtV~VWDl~tg~~v~~l~~h 99 (845)
+.+++.|+. ...+.+||..+.+-... +......-.++. -++..++.|+.+ ..+.+||..+++-...-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345556654 35788999877653221 111112222222 256667777654 67889999887543322211
Q ss_pred CCCe-EEEEEccCCCEEEEEECC------CeEEEEECCCCce
Q psy467 100 KSSI-TSVDFHPYGDYLCSGSLD------SFIKLWDLRRKGC 134 (845)
Q Consensus 100 ~~~V-~~lafspdg~~Lasgs~D------G~I~IWDl~t~~~ 134 (845)
.... .+++ .-+++.++.|+.+ ..+.+||..+.+-
T Consensus 90 ~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 90 TPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp SCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred ccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 1111 1222 2256677777755 4588999887653
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.31 Score=55.76 Aligned_cols=62 Identities=19% Similarity=0.215 Sum_probs=41.8
Q ss_pred eEEEEEcc-CCCEEEEEE-CCCeEEEEECCCCceEEEEcCC---CCCeEEEEE-------ecCCCEEEEEeCCC
Q psy467 103 ITSVDFHP-YGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGH---SKSINSIRF-------SPDGQWIASGGEDG 164 (845)
Q Consensus 103 V~~lafsp-dg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h---~~~V~sLaf-------SPdg~~Lasgs~DG 164 (845)
...|+|+| ++..|+++. ..+.|++.|+.++......... ......++| +++|++|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 46899998 344455444 4467999999876655444322 235889999 99999777666544
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=95.84 E-value=2.6 Score=45.58 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=59.1
Q ss_pred CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc-------CCCCCeEEEEEccC---CCEEEEEE-C-------
Q psy467 59 TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN-------GHKSSITSVDFHPY---GDYLCSGS-L------- 120 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~-------~h~~~V~~lafspd---g~~Lasgs-~------- 120 (845)
.....|+|.|+|+.|+++...|.|++++.. +.....+. ........|+|+|+ +..|+++. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 356899999999934445578999999853 33211111 12345689999996 55555443 2
Q ss_pred CCeEEEEECCCC--c--eEEE-EcC------CCCCeEEEEEecCCCEEEEEeC
Q psy467 121 DSFIKLWDLRRK--G--CIYT-YRG------HSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 121 DG~I~IWDl~t~--~--~l~~-~~~------h~~~V~sLafSPdg~~Lasgs~ 162 (845)
...|..|++... . .... +.. .......|+|.|||.+.++.+.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 235666766532 1 1111 111 1122457999999965555443
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.28 Score=51.76 Aligned_cols=104 Identities=10% Similarity=0.114 Sum_probs=54.5
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEEC----C-----CcEEEEECCCCc
Q psy467 27 SGQVLATGGDD----KKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQ----S-----GSIKIWNLAVPT 91 (845)
Q Consensus 27 dg~~LaTgs~D----G~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~----D-----GtV~VWDl~tg~ 91 (845)
++.+++.|+.+ ..+.+||..+.+-... +......-..+.+ ++..++.|+. + ..+.+||..+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 56777777742 3688999876653221 1111111122222 5566666654 2 468899998765
Q ss_pred EEEEE--cCCCCCeEEEEEccCCCEEEEEECC-----CeEEEEECCCCce
Q psy467 92 VQRTL--NGHKSSITSVDFHPYGDYLCSGSLD-----SFIKLWDLRRKGC 134 (845)
Q Consensus 92 ~v~~l--~~h~~~V~~lafspdg~~Lasgs~D-----G~I~IWDl~t~~~ 134 (845)
-...- .........+.+ +++.++.|+.+ ..+.+||..+.+-
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 33221 111111222222 56666666643 3588889876543
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=95.73 E-value=0.51 Score=52.76 Aligned_cols=139 Identities=19% Similarity=0.141 Sum_probs=96.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCC----CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc-----------
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGH----STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT----------- 91 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h----~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~----------- 91 (845)
+|..++++-. +.||.-++......+.+... -..|..+..+|+|++||..+ +.+|.|-.+..+.
T Consensus 31 n~t~i~~a~~-n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQD-NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEET-TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEEC-CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 6666666643 57887787644445555432 23688899999999999885 6688888886321
Q ss_pred -EEEEEcC------CCCCeEEEEEccC---CCEEEEEECCCeEEEEECCCC--ceEEEEc---------CCCCCeEEEEE
Q psy467 92 -VQRTLNG------HKSSITSVDFHPY---GDYLCSGSLDSFIKLWDLRRK--GCIYTYR---------GHSKSINSIRF 150 (845)
Q Consensus 92 -~v~~l~~------h~~~V~~lafspd---g~~Lasgs~DG~I~IWDl~t~--~~l~~~~---------~h~~~V~sLaf 150 (845)
..+.+.- ...+|..+.|||- +..|++-..|+.|++||+... ++. .++ .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 1233332 2467999999995 468999999999999999742 122 222 22357889999
Q ss_pred ecCCCEEEEEe--CCCcEEE
Q psy467 151 SPDGQWIASGG--EDGVVRI 168 (845)
Q Consensus 151 SPdg~~Lasgs--~DG~I~I 168 (845)
..++-.|...+ .+|.|+-
T Consensus 188 g~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEE
T ss_pred cCCCcEEEEEecCCCCCEEE
Confidence 98877676655 7777765
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=95.73 E-value=4.9 Score=47.89 Aligned_cols=140 Identities=15% Similarity=0.199 Sum_probs=83.2
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec----CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS----GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~----~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg 90 (845)
...|.||.-.. +|. |..|+.+| +..||-.. ...+. .....|.++....++ .|..|+.+| +..+|..+.
T Consensus 21 ~n~V~~I~qD~-~G~-lWigT~~G-L~ryDG~~---~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~ 92 (758)
T 3ott_A 21 ASVVSCFLQDS-EGL-IWIGSNKG-LFSYDGYS---TQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRAD 92 (758)
T ss_dssp CCCEEEEEECT-TSC-EEEEESSC-EEEECSSC---EEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTT
T ss_pred cceEEEEEECC-CCC-EEEEECCC-ccccCCCc---eEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCC
Confidence 45799999876 554 55667777 66676432 22221 123568888877765 566666554 889998876
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc-----CCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-----GHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-----~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
+...........|.++.. .++ .|..++.+ -|..+|..+++.. .+. .....|.++....+|.+.+ ++.+|
T Consensus 93 ~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G- 166 (758)
T 3ott_A 93 RYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG- 166 (758)
T ss_dssp EECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-
T ss_pred EEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-
Confidence 432211112234776654 344 56667766 5888998765543 331 1234578888877777554 44444
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
+..
T Consensus 167 l~~ 169 (758)
T 3ott_A 167 LCR 169 (758)
T ss_dssp EEE
T ss_pred Hhh
Confidence 555
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.44 Score=49.78 Aligned_cols=60 Identities=10% Similarity=0.064 Sum_probs=34.0
Q ss_pred EEEEEeCC-----CeEEEEECCCCeEEEE--ecCCCCCEEEEEEeCCCCEEEEEeCC-----C-EEEEEecCCce
Q psy467 294 LTTSSSAD-----RTVNFWDLEKFSLVST--TEKNSSTIRRLTFSEGGECLLGGDTE-----G-LKVYGWEPARQ 355 (845)
Q Consensus 294 lLatgs~D-----G~I~IWDl~s~~~l~t--l~gh~~~VtslafSpdG~~Lasgs~D-----G-I~IWDl~tgk~ 355 (845)
+++.|+.+ ..+.+||+.+.+-... +........++. -++++++.|+.+ . +.+||..+.+-
T Consensus 162 iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 66666544 4688999887643322 111111112222 266777777653 2 88999887653
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=95.64 E-value=1.2 Score=56.79 Aligned_cols=118 Identities=10% Similarity=0.226 Sum_probs=76.0
Q ss_pred CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE
Q psy467 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC 116 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La 116 (845)
..+|.|.|+.++..+.+-. -.--+.-.+|..+.||.-. ..++.|+|+++...++.+.- ..+|..=.|-.+. .|+
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVA 120 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-eeE
Confidence 3478888887765542211 1122334577777776654 78999999998887777763 3456666776544 444
Q ss_pred EEECCCeEEEEECCC-CceEEEEcCC----CCCeEEEEEecCCCEEEEEe
Q psy467 117 SGSLDSFIKLWDLRR-KGCIYTYRGH----SKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 117 sgs~DG~I~IWDl~t-~~~l~~~~~h----~~~V~sLafSPdg~~Lasgs 161 (845)
..+ +..|..|++.. ..+...+..| ...|.....+++.+|++..|
T Consensus 121 lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred EEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence 443 45799999964 2343333333 45677888899999977654
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.61 E-value=1.7 Score=45.75 Aligned_cols=100 Identities=9% Similarity=0.048 Sum_probs=53.5
Q ss_pred EEEEEeCCCeEEEEECCCCeeEE-EecCCCCCeEEEEEcCCCCEEEEEEC-----C------CcEEEEECCCCcEEEEEc
Q psy467 30 VLATGGDDKKVNLWALGKSNCIM-SLSGHSTPVESVQFGNGEETLSAGCQ-----S------GSIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~-----D------GtV~VWDl~tg~~v~~l~ 97 (845)
+++.|+ ..+.+||..+.+-.. .+..........+...++..++.|+. . ..+.+||..+++-. .+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECC
Confidence 344555 479999998776432 22212223333334457777777773 1 12778898876542 222
Q ss_pred CCCCCe--EEEEEccCCCEEEEEECC--------CeEEEEECCCCc
Q psy467 98 GHKSSI--TSVDFHPYGDYLCSGSLD--------SFIKLWDLRRKG 133 (845)
Q Consensus 98 ~h~~~V--~~lafspdg~~Lasgs~D--------G~I~IWDl~t~~ 133 (845)
....+- .+++.. ++..++.|+.+ ..+.+||..+.+
T Consensus 84 ~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~ 128 (315)
T 4asc_A 84 PLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFK 128 (315)
T ss_dssp CBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTE
T ss_pred CCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCc
Confidence 111111 122222 55666666632 358889988764
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=95.54 E-value=3.5 Score=44.84 Aligned_cols=116 Identities=10% Similarity=0.019 Sum_probs=74.1
Q ss_pred ceeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEe----cCCCCCeEEEEEcCC---CCEE
Q psy467 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSL----SGHSTPVESVQFGNG---EETL 73 (845)
Q Consensus 3 irlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l----~~h~~~V~sLafSpd---g~~L 73 (845)
..+|.+..+...-..-+.|+|.| +|+++++--..|.|++++..+++. +..+ .........|+|+|+ +.+|
T Consensus 19 ~~~~~~~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~l 97 (347)
T 3das_A 19 GSVKVLRTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMV 97 (347)
T ss_dssp CCEEEEEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEE
T ss_pred CCCceeEEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEE
Confidence 34677788877777889999999 898777665589999998765543 2222 123456899999995 3444
Q ss_pred EEE-E--CCCcEEEEECCCC----------cEE-EEEcC-CCCCeEEEEEccCCCEEEEEE
Q psy467 74 SAG-C--QSGSIKIWNLAVP----------TVQ-RTLNG-HKSSITSVDFHPYGDYLCSGS 119 (845)
Q Consensus 74 aSg-s--~DGtV~VWDl~tg----------~~v-~~l~~-h~~~V~~lafspdg~~Lasgs 119 (845)
... + .++.|.-|....+ +.+ ..+.. .......|.|.|||.+.++.+
T Consensus 98 Yv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 98 YAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 432 2 3556666766541 111 22321 112345799999998777654
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.43 E-value=1.3 Score=46.17 Aligned_cols=62 Identities=10% Similarity=0.165 Sum_probs=33.2
Q ss_pred CEEEEEECC----CcEEEEECCCCcEEEEEcCCC-CC-eEEEEEccCCCEEEEEECC-----CeEEEEECCCCce
Q psy467 71 ETLSAGCQS----GSIKIWNLAVPTVQRTLNGHK-SS-ITSVDFHPYGDYLCSGSLD-----SFIKLWDLRRKGC 134 (845)
Q Consensus 71 ~~LaSgs~D----GtV~VWDl~tg~~v~~l~~h~-~~-V~~lafspdg~~Lasgs~D-----G~I~IWDl~t~~~ 134 (845)
..++.|+.+ ..+..+|+.+.+-.. +.... .. -.+++. -++..++.|+.+ ..+.+||..+.+-
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 89 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQ-VAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQW 89 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeE-cccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCce
Confidence 444555432 458888988765332 22111 11 112222 256667777654 3588899877653
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.36 E-value=1.4 Score=46.05 Aligned_cols=105 Identities=9% Similarity=0.074 Sum_probs=57.5
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC------CcEEEEECCCCcEEE
Q psy467 27 SGQVLATGGDD----KKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS------GSIKIWNLAVPTVQR 94 (845)
Q Consensus 27 dg~~LaTgs~D----G~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D------GtV~VWDl~tg~~v~ 94 (845)
++.+++.|+.+ ..+.+||..+.+-... +......-.++.+ ++..++.|+.+ ..+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56777777754 5788899877643322 2211222222222 56677777654 468999998875433
Q ss_pred EEcCCCC-CeEEEEEccCCCEEEEEEC---------CCeEEEEECCCCce
Q psy467 95 TLNGHKS-SITSVDFHPYGDYLCSGSL---------DSFIKLWDLRRKGC 134 (845)
Q Consensus 95 ~l~~h~~-~V~~lafspdg~~Lasgs~---------DG~I~IWDl~t~~~ 134 (845)
.-..... .-.+++. -+++.++.|+. -..+.+||+.+.+-
T Consensus 133 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred CCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 2111111 1112222 25666666653 34588999987643
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=2.1 Score=46.73 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=60.0
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEE------------ECCCcEEEEECCC--CcEE-EEEcC-----CCCCeEEEEEcc--C
Q psy467 54 LSGHSTPVESVQFGNGEETLSAG------------CQSGSIKIWNLAV--PTVQ-RTLNG-----HKSSITSVDFHP--Y 111 (845)
Q Consensus 54 l~~h~~~V~sLafSpdg~~LaSg------------s~DGtV~VWDl~t--g~~v-~~l~~-----h~~~V~~lafsp--d 111 (845)
+.+-......+...++|..++++ ..+|.|.++|.++ ++.. ..+.+ .......+.+.+ +
T Consensus 45 i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 45 VKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD 124 (355)
T ss_dssp CTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT
T ss_pred eCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC
Confidence 34323456677778876544443 1689999999974 3321 12222 123567788766 3
Q ss_pred CC-EEEEEE-C--CCeEEEEECCCC-c---eEEEEcCC-CCCeEEEEEecCCCEEEEE
Q psy467 112 GD-YLCSGS-L--DSFIKLWDLRRK-G---CIYTYRGH-SKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 112 g~-~Lasgs-~--DG~I~IWDl~t~-~---~l~~~~~h-~~~V~sLafSPdg~~Lasg 160 (845)
+. +|+++. . +.+|.+|++... . .+..+.+. -...+.+++.++|.+.++.
T Consensus 125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~ 182 (355)
T 3sre_A 125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATN 182 (355)
T ss_dssp CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecC
Confidence 53 454443 2 457778777543 2 22333322 2357788888888766654
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=94.92 E-value=5.3 Score=43.41 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=67.4
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE--EEEc----CCCCCeEEEEEccC---CCEEEEE-E--
Q psy467 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ--RTLN----GHKSSITSVDFHPY---GDYLCSG-S-- 119 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v--~~l~----~h~~~V~~lafspd---g~~Lasg-s-- 119 (845)
..+...-...+.|+|.|+|.++++--..|.|++++..+++.. ..+. ........|+++|+ +..|++. +
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 334444556789999999997777654899999987666532 2221 23456789999995 4455443 2
Q ss_pred CCCeEEEEECCCC----------ceEE-EEc-CCCCCeEEEEEecCCCEEEEEeC
Q psy467 120 LDSFIKLWDLRRK----------GCIY-TYR-GHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 120 ~DG~I~IWDl~t~----------~~l~-~~~-~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
.++.|.-|.+..+ +.+. .+. .....-..|+|.|||.+.++.+.
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 3456666766541 1111 221 11123456889998877666554
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=94.85 E-value=2.6 Score=46.06 Aligned_cols=75 Identities=12% Similarity=0.136 Sum_probs=47.6
Q ss_pred CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC--EEEEEecC-Cce--EEEecCCCCCeEEEEEc-C-C
Q psy467 302 RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--LKVYGWEP-ARQ--YDAQPMGWGKVQDLAVT-G-T 374 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--I~IWDl~t-gk~--l~tl~~h~~~VtsVafS-d-g 374 (845)
|.|+.+|.. +.. .+...-...+.++|||||+.|+.+.... |..|+++. ++. .+.+ ...+..-.+++. + |
T Consensus 203 g~vyr~d~~--~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G 278 (355)
T 3sre_A 203 SFVTYYSPN--DVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTG 278 (355)
T ss_dssp EEEEEECTT--CCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTC
T ss_pred cEEEEEECC--eEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCC
Confidence 456666653 222 2222234579999999999988887544 99999874 332 1233 224667888888 4 8
Q ss_pred ceEEEE
Q psy467 375 QLWFRR 380 (845)
Q Consensus 375 ~lLaaS 380 (845)
.+.+++
T Consensus 279 ~lwva~ 284 (355)
T 3sre_A 279 DLWVGC 284 (355)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 876654
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=94.84 E-value=0.76 Score=58.45 Aligned_cols=122 Identities=11% Similarity=0.204 Sum_probs=78.4
Q ss_pred EEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-cEEEEEcCC-
Q psy467 22 ALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-TVQRTLNGH- 99 (845)
Q Consensus 22 afSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg-~~v~~l~~h- 99 (845)
-.+| ..+.+|.=. ..++.|+|+++...++...- ...|.-=.|-.+ +.|+.. .+..|.-|++... .+++.|..|
T Consensus 72 IMnP-~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~-~~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 72 IMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALV-TDNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred ccCC-CcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCC-CeeEEE-cCCeEEEeccCCCCccHHHHhcch
Confidence 3456 556666654 56899999988887777663 445766677644 445444 3668999999742 444444433
Q ss_pred ---CCCeEEEEEccCCCEEEEEE-------CCCeEEEEECCCCceEEEEcCCCCCeEEEE
Q psy467 100 ---KSSITSVDFHPYGDYLCSGS-------LDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149 (845)
Q Consensus 100 ---~~~V~~lafspdg~~Lasgs-------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLa 149 (845)
...|..-..+++.++++..| ..|.+.+|.++. +.-+.+.+|......+.
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~~F~~~~ 205 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFK 205 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHhhhheec
Confidence 35677777888888877543 357889998864 34445566655443333
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.76 E-value=0.59 Score=50.85 Aligned_cols=113 Identities=12% Similarity=0.069 Sum_probs=75.4
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCC-CCCeEEEEEc--CCCCEEEEE--ECCCcEEEEECCCCcEEEEEcC----
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGH-STPVESVQFG--NGEETLSAG--CQSGSIKIWNLAVPTVQRTLNG---- 98 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h-~~~V~sLafS--pdg~~LaSg--s~DGtV~VWDl~tg~~v~~l~~---- 98 (845)
+.++++++.||.|.-.|..+|+...++... ..++....-. +.+..++.+ +.||.|..++..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 357889999999999999999999988753 1233221100 112234433 5799999999998865554431
Q ss_pred CCCCeEE---EEE-----ccCCCEEEEEECCCeEEEEECCCCceEEEEcC
Q psy467 99 HKSSITS---VDF-----HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 99 h~~~V~~---laf-----spdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~ 140 (845)
...++.. ... ...+..+++|+.+|.+...|+.+|+.+..+..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1222221 000 01355789999999999999999999999864
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=94.54 E-value=1.6 Score=48.71 Aligned_cols=105 Identities=21% Similarity=0.227 Sum_probs=74.8
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCcEEEEEcCC----CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc---------
Q psy467 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGH----KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--------- 133 (845)
Q Consensus 67 Spdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h----~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~--------- 133 (845)
+.+|..++.+ .++.||.-++......+.+... ...|..+..+|+|++||..+ +..|.|..+..+.
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 4466666666 4678888887754444554432 23688899999999998886 4578888886221
Q ss_pred ---eEEEEcC------CCCCeEEEEEec---CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCC
Q psy467 134 ---CIYTYRG------HSKSINSIRFSP---DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL 186 (845)
Q Consensus 134 ---~l~~~~~------h~~~V~sLafSP---dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t 186 (845)
..+.+.- ...+|..+.|+| .+..|++-..|+.|++ ||+..
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~-------------yDl~~ 158 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITM-------------FDILN 158 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEE-------------EETTC
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEE-------------EEccc
Confidence 1223332 246799999999 4568999999999999 99986
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=94.46 E-value=3.3 Score=43.50 Aligned_cols=101 Identities=9% Similarity=0.022 Sum_probs=52.5
Q ss_pred EEEEEeCCCeEEEEECCCCeeEE-EecCCCCCeEEEEEcCCCCEEEEEEC----CC-------cEEEEECCCCcEEEEEc
Q psy467 30 VLATGGDDKKVNLWALGKSNCIM-SLSGHSTPVESVQFGNGEETLSAGCQ----SG-------SIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~----DG-------tV~VWDl~tg~~v~~l~ 97 (845)
+++.|+. .+..||..+.+-.. .+..........+...++..++.|+. ++ .+.++|..+++-.. +.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG-LP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE-CS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE-CC
Confidence 4444443 48899988776433 12211222233334456777788773 11 27788888765432 22
Q ss_pred CCCC--CeEEEEEccCCCEEEEEECC-------CeEEEEECCCCce
Q psy467 98 GHKS--SITSVDFHPYGDYLCSGSLD-------SFIKLWDLRRKGC 134 (845)
Q Consensus 98 ~h~~--~V~~lafspdg~~Lasgs~D-------G~I~IWDl~t~~~ 134 (845)
.... .-.+++.. +++.++.|+.+ ..+.+||..+.+-
T Consensus 95 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 139 (318)
T 2woz_A 95 PLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKW 139 (318)
T ss_dssp CBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEE
T ss_pred CCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCE
Confidence 1111 11122222 56666777754 2478888876643
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=94.19 E-value=1.7 Score=45.68 Aligned_cols=60 Identities=12% Similarity=0.052 Sum_probs=33.3
Q ss_pred EEEEEeCC-----CeEEEEECCCCeEEEE--ecCCCCCEEEEEEeCCCCEEEEEeCC-----C-EEEEEecCCce
Q psy467 294 LTTSSSAD-----RTVNFWDLEKFSLVST--TEKNSSTIRRLTFSEGGECLLGGDTE-----G-LKVYGWEPARQ 355 (845)
Q Consensus 294 lLatgs~D-----G~I~IWDl~s~~~l~t--l~gh~~~VtslafSpdG~~Lasgs~D-----G-I~IWDl~tgk~ 355 (845)
+++.|+.+ ..+.+||+.+.+-... +........++.+ ++++++.|+.+ . +.+||+.+.+-
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 56666544 4588999877643221 1111111222222 67777777653 3 88999887643
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.18 E-value=1.9 Score=45.37 Aligned_cols=125 Identities=10% Similarity=-0.033 Sum_probs=61.9
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeC-----C------CeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCC
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGD-----D------KKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~-----D------G~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~ 71 (845)
-|....+........+.+... ++.+++.|+. . ..+.+||..+.+-... +......-..+.+ ++.
T Consensus 24 ~W~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 100 (315)
T 4asc_A 24 ECYCASLSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNS 100 (315)
T ss_dssp EEEEEECCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTE
T ss_pred eEecCCCCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCE
Confidence 355444433222333333333 6788888873 1 1277888876543221 1111111112222 556
Q ss_pred EEEEEECC--------CcEEEEECCCCcEEEEEcCCCCCe-EEEEEccCCCEEEEEEC-C-----CeEEEEECCCCc
Q psy467 72 TLSAGCQS--------GSIKIWNLAVPTVQRTLNGHKSSI-TSVDFHPYGDYLCSGSL-D-----SFIKLWDLRRKG 133 (845)
Q Consensus 72 ~LaSgs~D--------GtV~VWDl~tg~~v~~l~~h~~~V-~~lafspdg~~Lasgs~-D-----G~I~IWDl~t~~ 133 (845)
.++.|+.+ ..+.+||..+++-...-....... .+++. -+++.++.|+. + ..+.+||..+.+
T Consensus 101 lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 101 IYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp EEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred EEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 66666632 468999998775332211111111 12222 35666677765 2 468899988764
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=94.04 E-value=5.4 Score=46.00 Aligned_cols=93 Identities=10% Similarity=0.176 Sum_probs=57.6
Q ss_pred CCCEEEEEe-CCCeEEEEECCCCeeEEEec-CCCCCeEEEEEc--CCCCEEEEEEC-------CCcE---------EE--
Q psy467 27 SGQVLATGG-DDKKVNLWALGKSNCIMSLS-GHSTPVESVQFG--NGEETLSAGCQ-------SGSI---------KI-- 84 (845)
Q Consensus 27 dg~~LaTgs-~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafS--pdg~~LaSgs~-------DGtV---------~V-- 84 (845)
+|++|+.-. .+..|-..++...++-+.+. .....+.+++|- |+..|+++++. ||.. .+
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 567777766 46688888988887766554 346678899986 68889888874 3331 11
Q ss_pred -EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC
Q psy467 85 -WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL 120 (845)
Q Consensus 85 -WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~ 120 (845)
.|.++.+....+.. .+..-.+...+++++.++.+.
T Consensus 221 ~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~y 256 (638)
T 3sbq_A 221 AIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCY 256 (638)
T ss_dssp EEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEES
T ss_pred EEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeee
Confidence 23333333333221 223344566777888777664
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=93.97 E-value=13 Score=44.08 Aligned_cols=144 Identities=13% Similarity=0.082 Sum_probs=85.1
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
..|.++.... +| .|..|+.+| +..||..+.............|.++... ++ .|..++.+ .|..+|..+++....
T Consensus 63 ~~i~~i~~d~-~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~~~ 136 (758)
T 3ott_A 63 TRIYCGVIID-NT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLTSF 136 (758)
T ss_dssp SCEEEEEEET-TT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEEEE
T ss_pred ceEEEEEEcC-CC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEEEe
Confidence 4688888765 44 566676665 7899987764332111123457777653 44 56666655 688899887654332
Q ss_pred Ec----CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-----CCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 96 LN----GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-----HSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 96 l~----~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-----h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
.. .....|.++....++...+ |+.+ -|..++..+++....... ....|.++....++..|..|+.. -+
T Consensus 137 ~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~-Gl 213 (758)
T 3ott_A 137 DTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG-YL 213 (758)
T ss_dssp CHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE-EE
T ss_pred ccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECC-CC
Confidence 11 1234588888777776544 5554 477888876654321111 12247888888777655555543 46
Q ss_pred EE
Q psy467 167 RI 168 (845)
Q Consensus 167 ~I 168 (845)
..
T Consensus 214 ~~ 215 (758)
T 3ott_A 214 FQ 215 (758)
T ss_dssp EE
T ss_pred eE
Confidence 66
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=93.87 E-value=2.6 Score=47.55 Aligned_cols=111 Identities=8% Similarity=0.034 Sum_probs=66.1
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEecC------CCCCeEEEEEcCC---CCEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSLSG------HSTPVESVQFGNG---EETLSAG 76 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~~------h~~~V~sLafSpd---g~~LaSg 76 (845)
+..+...-..-++|+|.| +|+++++-...+.|++++..++.. +..+.. .......|+|+|+ +.+|..+
T Consensus 19 ~~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 444444445678999999 898777654445788888655543 222321 2456789999995 5555444
Q ss_pred EC-------------CCcEEEEECCCC-------cEEE-EEcC-CCCCeEEEEEccCCCEEEEEE
Q psy467 77 CQ-------------SGSIKIWNLAVP-------TVQR-TLNG-HKSSITSVDFHPYGDYLCSGS 119 (845)
Q Consensus 77 s~-------------DGtV~VWDl~tg-------~~v~-~l~~-h~~~V~~lafspdg~~Lasgs 119 (845)
.. ...|.-|+...+ +.+. .+.. .......|+|.|||.+.++.+
T Consensus 98 ~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 32 235666665432 1111 1221 123468899999998776654
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=93.81 E-value=9.9 Score=43.88 Aligned_cols=91 Identities=10% Similarity=0.185 Sum_probs=63.9
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCC-------------------------CCCe--EEEEEc---CCCCEEEEEEC-
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGH-------------------------STPV--ESVQFG---NGEETLSAGCQ- 78 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h-------------------------~~~V--~sLafS---pdg~~LaSgs~- 78 (845)
.+.+|+..|.|+|+-+.+++.++.+.-. .+.. -.+.+. .||+||+.-..
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 4667888999999999999998887411 1111 123333 26788888765
Q ss_pred CCcEEEEECCCCcEEEEEc-CCCCCeEEEEEc--cCCCEEEEEEC
Q psy467 79 SGSIKIWNLAVPTVQRTLN-GHKSSITSVDFH--PYGDYLCSGSL 120 (845)
Q Consensus 79 DGtV~VWDl~tg~~v~~l~-~h~~~V~~lafs--pdg~~Lasgs~ 120 (845)
...|...+++..++-+.+. .....+..++|- |+..|+++++.
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e 196 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAE 196 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEEC
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecce
Confidence 5678889999887765553 245678888886 67788888774
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=93.75 E-value=4.4 Score=42.47 Aligned_cols=105 Identities=11% Similarity=0.072 Sum_probs=53.9
Q ss_pred CCCEEEEEeC----CC-------eEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC-------CcEEEEE
Q psy467 27 SGQVLATGGD----DK-------KVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS-------GSIKIWN 86 (845)
Q Consensus 27 dg~~LaTgs~----DG-------~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D-------GtV~VWD 86 (845)
++.+++.|+. ++ .+.+||..+.+-... +......-..+.+ ++..++.|+.+ ..+.+||
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEe
Confidence 6788888873 12 167788766543221 1111111222222 56666777653 3588889
Q ss_pred CCCCcEEEEEcCCCCCe-EEEEEccCCCEEEEEEC------CCeEEEEECCCCce
Q psy467 87 LAVPTVQRTLNGHKSSI-TSVDFHPYGDYLCSGSL------DSFIKLWDLRRKGC 134 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V-~~lafspdg~~Lasgs~------DG~I~IWDl~t~~~ 134 (845)
..+.+-...-....... .+++. .+++.++.|+. -..+.+||+.+.+-
T Consensus 134 ~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 134 PVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 88765433211111111 12222 35666666653 23589999987653
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.69 E-value=1.1 Score=47.88 Aligned_cols=55 Identities=4% Similarity=-0.086 Sum_probs=30.2
Q ss_pred eEEEEECCCC--eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-------EEEEEecCCceEEEe
Q psy467 303 TVNFWDLEKF--SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-------LKVYGWEPARQYDAQ 359 (845)
Q Consensus 303 ~I~IWDl~s~--~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-------I~IWDl~tgk~l~tl 359 (845)
.+.+||+.+. +.+..+......-. +..-++++++.|+.++ |.++++++++.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGV--SLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSE--EEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCCCCcccce--eEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 5778998754 44444443222222 2334778888888542 556688887766543
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=93.60 E-value=0.48 Score=48.41 Aligned_cols=143 Identities=12% Similarity=0.059 Sum_probs=84.6
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee------EEEec--CCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC------IMSLS--GHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~------i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
..+.+++|+| +|.+.++ .+|.+.-.+..+... -..+- +-+. -.++.|.++|.+.++ .||.|.-++-
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 3778999999 9997777 677766655543211 11111 1111 368899999988777 5699988876
Q ss_pred CCCcE-------EEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc------eEEEEc-CCCCCeEEEEEecC
Q psy467 88 AVPTV-------QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG------CIYTYR-GHSKSINSIRFSPD 153 (845)
Q Consensus 88 ~tg~~-------v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~------~l~~~~-~h~~~V~sLafSPd 153 (845)
.+... ...-...-..+..|.|.|+|.+.++. |+.+.-+...++. ....+. ..-.....+.|.++
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~ 192 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV 192 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCC
Confidence 33110 11111122468999999999876666 7775443332111 111111 22234556779999
Q ss_pred CCEEEEEeCCCcEEE
Q psy467 154 GQWIASGGEDGVVRI 168 (845)
Q Consensus 154 g~~Lasgs~DG~I~I 168 (845)
+.+.++. ++.+.-
T Consensus 193 G~l~~v~--~g~~Y~ 205 (236)
T 1tl2_A 193 GTLFGVQ--GGKFYE 205 (236)
T ss_dssp SCEEEEE--TTEEEE
T ss_pred CcEEEEe--CCeEEe
Confidence 8877666 775544
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=93.34 E-value=13 Score=41.81 Aligned_cols=105 Identities=12% Similarity=0.212 Sum_probs=64.4
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE--EEEcC------CCCCeEEEEEccC---CCEEEEEEC------
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ--RTLNG------HKSSITSVDFHPY---GDYLCSGSL------ 120 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v--~~l~~------h~~~V~~lafspd---g~~Lasgs~------ 120 (845)
-...+.|+|.|+|+++++-...+.|.+++..+++.. ..+.. .......|+|+|+ +..|+++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 346789999999997776643457888887655432 23321 2355779999996 555655442
Q ss_pred -------CCeEEEEECCCC-------ceEE-EEcC-CCCCeEEEEEecCCCEEEEEeC
Q psy467 121 -------DSFIKLWDLRRK-------GCIY-TYRG-HSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 121 -------DG~I~IWDl~t~-------~~l~-~~~~-h~~~V~sLafSPdg~~Lasgs~ 162 (845)
...|.-|+.... +.+. .+.. .......|+|.|||.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666665322 1121 1221 2234688999999987776654
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=91.29 E-value=17 Score=38.45 Aligned_cols=127 Identities=9% Similarity=0.025 Sum_probs=72.8
Q ss_pred CCCEEEEEe--CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC--------------CcEEEEECCCC
Q psy467 27 SGQVLATGG--DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS--------------GSIKIWNLAVP 90 (845)
Q Consensus 27 dg~~LaTgs--~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D--------------GtV~VWDl~tg 90 (845)
++.+++... .++.|...+.+... ...+... .+--+++++.+|+-+... ..|+..+++.+
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 556666654 24566666654333 3334321 234568889988877543 36777787766
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEE----CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-CCc
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGS----LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-DGV 165 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs----~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-DG~ 165 (845)
+...... . . +..|++++++|+-.. .+..|...++.. .....+..+.. .+++++++.|+-.+. ...
T Consensus 99 ~~~~l~~-~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 99 GSTVLDP-D--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp CCEEEEC-S--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCC
T ss_pred cceEeec-C--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCce
Confidence 5333222 1 1 336788898888766 334566666653 33444443332 456777887775554 445
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
|..
T Consensus 169 Iy~ 171 (302)
T 3s25_A 169 LYR 171 (302)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.56 E-value=5.7 Score=42.24 Aligned_cols=64 Identities=6% Similarity=0.063 Sum_probs=33.0
Q ss_pred CCCEEEEEEC-CCcEEEEECCC-CcEEEEEcCCC--CC-eEEEEEccCCCEEEEEEC-C---------CeEEEEECCCCc
Q psy467 69 GEETLSAGCQ-SGSIKIWNLAV-PTVQRTLNGHK--SS-ITSVDFHPYGDYLCSGSL-D---------SFIKLWDLRRKG 133 (845)
Q Consensus 69 dg~~LaSgs~-DGtV~VWDl~t-g~~v~~l~~h~--~~-V~~lafspdg~~Lasgs~-D---------G~I~IWDl~t~~ 133 (845)
++..++.|+. ...+.++|..+ ......+.... .. -.+++. -+++.++.|+. + ..+.+||+.+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 4555555543 35688888864 12222332111 11 122222 25666666665 2 458899988764
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=88.01 E-value=16 Score=43.24 Aligned_cols=108 Identities=12% Similarity=0.091 Sum_probs=60.8
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeeEEEe-c-------CCCCCeEEEEEcCCCCEEEEEECC------CcEEEEECC
Q psy467 27 SGQVLATGGDD----KKVNLWALGKSNCIMSL-S-------GHSTPVESVQFGNGEETLSAGCQS------GSIKIWNLA 88 (845)
Q Consensus 27 dg~~LaTgs~D----G~I~IWdl~t~~~i~~l-~-------~h~~~V~sLafSpdg~~LaSgs~D------GtV~VWDl~ 88 (845)
++.+++.||.+ ..+.+||..+.+-...- . .....-.++.+..++..++.|+.+ +.+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 66788888753 35888888765433222 1 111122233332267777777653 358889998
Q ss_pred CCcEEEEEcCC-CCCeEEEEEccCCCEEEEEECCC--eEEEEECCCCce
Q psy467 89 VPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLDS--FIKLWDLRRKGC 134 (845)
Q Consensus 89 tg~~v~~l~~h-~~~V~~lafspdg~~Lasgs~DG--~I~IWDl~t~~~ 134 (845)
+.+-...-... ...-.+++...+++.++.|+.++ .+.+||..+..-
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 76433221111 11112333334778888887654 689999987653
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=83.08 E-value=49 Score=34.73 Aligned_cols=128 Identities=6% Similarity=-0.006 Sum_probs=75.9
Q ss_pred EEEecCCCCEEEEEeCC--------------CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE--C--CCcE
Q psy467 21 LALGKKSGQVLATGGDD--------------KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC--Q--SGSI 82 (845)
Q Consensus 21 LafSp~dg~~LaTgs~D--------------G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs--~--DGtV 82 (845)
--+++ +|++|+.+... ..|+..+++..+... +.. .. +..|++++++|+-.. . ...|
T Consensus 58 ~~i~~-~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINA-DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEE-CSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeEEE-cCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 34567 77777766542 367777776655333 321 11 236788899988776 2 3455
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC-CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL-DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~-DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
..-+++... ...+..+.. .+|+++++.|+-.+. ...|.+.++..+.....+. +... ..++|++.+|+-..
T Consensus 132 y~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 132 YRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMD 202 (302)
T ss_dssp EEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEE
T ss_pred EEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEE
Confidence 556666433 344443332 456778888876665 5788888887655443333 2222 34668888877665
Q ss_pred CC
Q psy467 162 ED 163 (845)
Q Consensus 162 ~D 163 (845)
.+
T Consensus 203 ~~ 204 (302)
T 3s25_A 203 VN 204 (302)
T ss_dssp GG
T ss_pred cC
Confidence 43
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=81.37 E-value=2.7 Score=42.95 Aligned_cols=133 Identities=11% Similarity=0.034 Sum_probs=76.1
Q ss_pred CCEEEEEeCCCeEEEEECCCCe------eEEEecC-CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE------EE
Q psy467 28 GQVLATGGDDKKVNLWALGKSN------CIMSLSG-HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV------QR 94 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~------~i~~l~~-h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~------v~ 94 (845)
..+|++...| +++.=...++. ...++-. -=..+.+++|+|+|.+.++ .+|.+.-.+..+... -.
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 3456666666 55444333332 1222221 1236779999999986666 677766666544111 12
Q ss_pred EEc--CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE------EEE-cCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 95 TLN--GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI------YTY-RGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 95 ~l~--~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l------~~~-~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
.+- +-. ...++.|.|+|.+.++ .||.|.-++-.+...- ..+ ...=..+..|.+.|+|.+.++. |+.
T Consensus 81 ~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 81 KIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp EEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred Eecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 221 111 1468899999987776 5698887775332111 111 1111467899999999977766 776
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
++-
T Consensus 156 lyr 158 (236)
T 1tl2_A 156 FYK 158 (236)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 845 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-31 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 6e-27 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-19 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-31 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-22 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-18 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-12 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 4e-12 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-12 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-24 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-18 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-15 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 9e-13 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-08 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-20 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 7e-16 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 7e-16 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-18 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-14 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 7e-14 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-17 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-14 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 4e-10 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 4e-17 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 4e-13 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-12 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-12 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 4e-08 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 3e-07 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 5e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 9e-17 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-15 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 3e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 0.003 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 1e-16 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 6e-10 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-06 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 1e-05 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 2e-04 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 8e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-16 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-12 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-11 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 7e-11 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-07 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 6e-15 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 7e-08 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-07 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 8e-15 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 4e-14 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-08 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 6e-08 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 1e-07 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-14 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 1e-13 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 9e-09 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 5e-13 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 9e-10 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 8e-07 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 4e-11 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 9e-11 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-07 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 6e-07 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 5e-10 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 5e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 7e-05 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-10 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-08 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 3e-07 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 6e-08 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 6e-05 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 6e-07 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 0.001 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 2e-06 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 3e-05 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 5e-04 | |
| d1qnia2 | 441 | b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter | 3e-06 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 5e-05 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 7e-04 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 124 bits (310), Expect = 1e-31
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 21/178 (11%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF---- 66
F H V + + G ++A+ +D+ V +W + C L H VE + +
Sbjct: 139 FTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPES 197
Query: 67 ----------------GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP 110
G L +G + +IK+W+++ TL GH + + V FH
Sbjct: 198 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 257
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
G ++ S + D +++WD + K C+ T H + S+ F ++ +G D V++
Sbjct: 258 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 315
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 110 bits (274), Expect = 6e-27
Identities = 64/341 (18%), Positives = 126/341 (36%), Gaps = 36/341 (10%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
H + V + V+ + +D + +W + +L GH+ V+ + F +
Sbjct: 13 LSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ L++ +IK+W+ RT++GH +++SV P GD++ S S D IK+W+++
Sbjct: 72 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 131
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190
C+ T+ GH + + +R + DG IAS D VR+ + +V +
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 191
Query: 191 GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250
P SS+ + + +KS G + ++
Sbjct: 192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSR-------------------------- 225
Query: 251 NPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310
D + + T V + + S + D+T+ WD +
Sbjct: 226 ---DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-----SCADDKTLRVWDYK 277
Query: 311 KFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ T + + L F + ++ G + V WE
Sbjct: 278 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ-TVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 87.9 bits (216), Expect = 2e-19
Identities = 61/306 (19%), Positives = 110/306 (35%), Gaps = 12/306 (3%)
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142
K W P + L+GH+S +T V FHP + S S D+ IK+WD T +GH+
Sbjct: 1 KEWIPR-PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 143 KSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYT---- 198
S+ I F G+ +AS D +++ V + P
Sbjct: 60 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSA 119
Query: 199 SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE-----SEDQAGEEELFATIANPC 253
S ++ + G + + + R ++ S DQ + AT
Sbjct: 120 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 179
Query: 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS 313
+ ++ + S+S + S +S L + S D+T+ WD+
Sbjct: 180 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR-DKTIKMWDVSTGM 238
Query: 314 LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372
+ T + + +R + F GG+ +L + L+V+ ++ R V L
Sbjct: 239 CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 298
Query: 373 GTQLWF 378
T +
Sbjct: 299 KTAPYV 304
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 123 bits (309), Expect = 2e-31
Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 2/143 (1%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI--W 85
++ +G D LW + + C + +GH + + ++ F + G + ++
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
+ + + ITSV F G L +G D +WD + GH +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
+ + + DG +A+G D ++I
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLKI 338
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 97.9 bits (242), Expect = 1e-22
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNL--WALGKSNCIMSLSGHSTPVESVQFGN 68
F H + +N + +G ATG DD L + S + SV F
Sbjct: 222 FTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L AG + +W+ L GH + ++ + G + +GS DSF+K+W+
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 86.3 bits (212), Expect = 1e-18
Identities = 55/340 (16%), Positives = 98/340 (28%), Gaps = 98/340 (28%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H A + + G ++L + D K+ +W +N + ++ S+ V + + +
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 SAGCQSGSIKIWNL---------------------------------------------A 88
+ G I+NL
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
T GH + S+ P SG+ D+ KLWD+R C T+ GH IN+I
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232
Query: 149 RFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208
F P+G A+G +D R+ + D +SV FS +
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD---------NIICGITSVSFSKSGR 283
Query: 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
L + G +V + + + H +
Sbjct: 284 LLLA------GYDDFNCNVWDALKADR--------------------AGVLAGHDN---- 313
Query: 269 GTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWD 308
V + L + + + S D + W+
Sbjct: 314 ----RV----SCLGVTDDGMAVA-----TGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.7 bits (161), Expect = 3e-12
Identities = 40/302 (13%), Positives = 84/302 (27%), Gaps = 8/302 (2%)
Query: 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDF 108
+L GH + ++ +G L + Q G + IW+ + S + + +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
P G+Y+ G LD+ +++L+ +
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVT 228
A + + + + + + S R G +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSP 288
+ NA G FAT ++ + + + TS+S
Sbjct: 226 ESDINAICFFPNG--NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283
Query: 289 MLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVY 348
+L + D N WD K + + + L ++ G + G + +
Sbjct: 284 LLL-----AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS-FLK 337
Query: 349 GW 350
W
Sbjct: 338 IW 339
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.3 bits (160), Expect = 4e-12
Identities = 30/248 (12%), Positives = 63/248 (25%), Gaps = 12/248 (4%)
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP 193
T RGH I ++ + D + + S +DG + I T +H +
Sbjct: 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLII--WDSYTTNKVHAIP-------LRS 97
Query: 194 PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253
T + S N + + N
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQI 157
Query: 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS 313
S+ + + + + ++ S L S + D + WD+ +
Sbjct: 158 VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217
Query: 314 LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG---LKVYGWEPARQYDAQPMGWGKVQDLA 370
T + S I + F G G + L + + + ++
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 371 VTGTQLWF 378
+ +
Sbjct: 278 FSKSGRLL 285
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 65.5 bits (158), Expect = 7e-12
Identities = 43/262 (16%), Positives = 83/262 (31%), Gaps = 12/262 (4%)
Query: 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
+RTL GH + I ++ + L S S D + +WD ++ S + + ++
Sbjct: 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 152 PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRK 211
P G ++A GG D + + T V +S T + + +
Sbjct: 107 PSGNYVACGGLDNICS----IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG 162
Query: 212 SFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271
T + T + + + ++ CD SA R T
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 222
Query: 272 VPVSVSRTSLSILPQSPMLCFILTTSSSADRTV--NFWDLEKFSLVSTTEKNSSTIRRLT 329
++ P + S D T ++ + + + I ++
Sbjct: 223 TGHESDINAICFFPNGNAFA-----TGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 330 FSEGGECLLGGDTEGLKVYGWE 351
FS+ G LL G + W+
Sbjct: 278 FSKSGRLLLAGYDDF-NCNVWD 298
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 104 bits (258), Expect = 2e-24
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 25/166 (15%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSL-------SGHSTPVESVQFGNGEETLSAGCQSG 80
G+ +A G D+ V +W + L +GH V SV F +++ +G
Sbjct: 217 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 276
Query: 81 SIKIWNLAVP------------TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
S+K+WNL T + T GHK + SV +Y+ SGS D + WD
Sbjct: 277 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD 336
Query: 129 LRRKGCIYTYRGHSKSINSI------RFSPDGQWIASGGEDGVVRI 168
+ + +GH S+ S+ P+ A+G D RI
Sbjct: 337 KKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARI 382
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 86.0 bits (211), Expect = 2e-18
Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 19/141 (13%)
Query: 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN------------CIMSLSG 56
E H SV + + GQ + +G D+ V LW L +N C ++ G
Sbjct: 248 ESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 306
Query: 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVD------FHP 110
H V SV +E + +G + + W+ L GH++S+ SV P
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP 366
Query: 111 YGDYLCSGSLDSFIKLWDLRR 131
+ +GS D ++W ++
Sbjct: 367 EYNVFATGSGDCKARIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 76.4 bits (186), Expect = 3e-15
Identities = 60/307 (19%), Positives = 106/307 (34%), Gaps = 46/307 (14%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
+ + + G+ LATG +D+ + +W + +M L GH + S+ + +
Sbjct: 119 SSDLYIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDK 177
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
L +G +++IW+L TL+ T G Y+ +GSLD +++WD
Sbjct: 178 LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG 237
Query: 133 GCIYTY-------RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLS 185
+ GH S+ S+ F+ DGQ + SG D V++ + N S S
Sbjct: 238 FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS 297
Query: 186 LVHPL-GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244
+ + SV + N S G + +
Sbjct: 298 GTCEVTYIGHKDFVLSVATTQNDEYILS------GSKDRGVLFWDKKSGNPL-------- 343
Query: 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304
+ Q HR+ S V V+ S+ P+ + + S D
Sbjct: 344 ------------LMLQGHRN---SVISVAVA---NGSSLGPEYNVFA-----TGSGDCKA 380
Query: 305 NFWDLEK 311
W +K
Sbjct: 381 RIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 68.7 bits (166), Expect = 9e-13
Identities = 69/350 (19%), Positives = 123/350 (35%), Gaps = 55/350 (15%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP---------- 60
+ H + V C+ G+ LATG + ++ + + + LS S
Sbjct: 58 SLDHTSVVCCVKF-SNDGEYLATGCNKT-TQVYRVSDGSLVARLSDDSAANKDPENLNTS 115
Query: 61 --------VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+ SV F + L+ G + I+IW++ + L GH+ I S+D+ P G
Sbjct: 116 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG 175
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
D L SGS D +++WDLR C T DG++IA+G D VR+
Sbjct: 176 DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRV---- 231
Query: 173 HLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232
+ T V L + GT SV F+ + S G + + ++
Sbjct: 232 WDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS------GSLDRSVKLWNLQN 285
Query: 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCF 292
+ + + S T + S++ +
Sbjct: 286 --------------------ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL- 324
Query: 293 ILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDT 342
S S DR V FWD + + + + + +++ + + G +
Sbjct: 325 ----SGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV 370
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.2 bits (131), Expect = 1e-08
Identities = 47/319 (14%), Positives = 90/319 (28%), Gaps = 19/319 (5%)
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIY----TYRGHSK 143
VP QR + +D + + L++ I H+
Sbjct: 4 VPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTS 63
Query: 144 SINSIRFSPDGQWIASGGEDGVVRIGASFH-----LTNTSIHVVDLSLVHPLGTP-PPQY 197
+ ++FS DG+++A+G S L++ S D ++ +P Y
Sbjct: 64 VVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLY 123
Query: 198 TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSA 257
SV FS + + + R + + E + F + S
Sbjct: 124 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 183
Query: 258 IFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317
R+G C ++ + SP + + S DR V WD E LV
Sbjct: 184 DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI-AAGSLDRAVRVWDSETGFLVER 242
Query: 318 TEKN-------SSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMGWGKVQDLA 370
+ ++ + F+ G+ ++ G + +
Sbjct: 243 LDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEV 302
Query: 371 VTGTQLWFRRVGTWSHQDS 389
F + D
Sbjct: 303 TYIGHKDFVLSVATTQNDE 321
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.2 bits (227), Expect = 1e-20
Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 8/144 (5%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
G + +G D + +W + NCI +L+GH + ++ + L +G ++KIW+
Sbjct: 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWD 243
Query: 87 LAVPT-VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-----G 140
+ +Q +K +++ + S D +KLWDL+ I G
Sbjct: 244 IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG 303
Query: 141 HSKSINSIRFSPDGQWIASGGEDG 164
+ IR S A G +G
Sbjct: 304 SGGVVWRIRASNTKLVCAVGSRNG 327
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.9 bits (190), Expect = 7e-16
Identities = 57/350 (16%), Positives = 109/350 (31%), Gaps = 39/350 (11%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
H V + G + +G DD + +W+ C+ +L GH+ V S Q +
Sbjct: 14 GHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 71
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
S + T + + + T H + + SGS D+ +++WD+
Sbjct: 72 ----SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 127
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT 192
C++ GH ++ +++ + + SG D +V++ D L T
Sbjct: 128 QCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKV-------------WDPETETCLHT 172
Query: 193 PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANP 252
+ S G I V +E G + L + +
Sbjct: 173 LQGHTNRVYSLQFDGIHVVS------GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK 226
Query: 253 CDYSAIFQPHRSLN----RSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWD 308
+ ++ ++G C+ +SS D TV WD
Sbjct: 227 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWD 286
Query: 309 LEKFSLVST-----TEKNSSTIRRLTFSEGGECLLGGD---TEGLKVYGW 350
L+ + + + + R+ S G TE K+
Sbjct: 287 LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.5 bits (189), Expect = 7e-16
Identities = 46/302 (15%), Positives = 82/302 (27%), Gaps = 24/302 (7%)
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS 144
W + L GH + + G+ + SGS D+ +K+W C+ T GH+
Sbjct: 1 WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 145 INSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFS 204
+ S + + S V + +T L S
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 205 HNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS 264
+ G A + + + A + + Q H
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGH-- 176
Query: 265 LNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324
+ + + S S D ++ WD+E + + T + S
Sbjct: 177 ---TNRVYSLQFDGIHV--------------VSGSLDTSIRVWDVETGNCIHTLTGHQSL 219
Query: 325 IRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMGWGKVQDLAVTGTQLWFRRVGTW 384
+ L+ G+ + V W+ Q + AVT Q V T
Sbjct: 220 TSGMELK--DNILVSGNADS-TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 276
Query: 385 SH 386
S
Sbjct: 277 SD 278
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.3 bits (209), Expect = 1e-18
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 15/143 (10%)
Query: 35 GDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94
D+ + +W + +L+GH + +Q+ + + +G +I++W++ R
Sbjct: 155 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLR 212
Query: 95 TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG---------CIYTYRGHSKSI 145
L GH+ + + SG+ D IK+WDL C+ T HS +
Sbjct: 213 VLEGHEELVR--CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 270
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
++F D I S D + I
Sbjct: 271 FRLQF--DEFQIVSSSHDDTILI 291
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.6 bits (176), Expect = 2e-14
Identities = 41/208 (19%), Positives = 71/208 (34%), Gaps = 48/208 (23%)
Query: 2 RAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPV 61
R +++ V CL Q + +G D + +W C L+GH+ V
Sbjct: 2 RHSLQRIHCRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV 58
Query: 62 ESVQFGNG--------------------------------------EETLSAGCQSGSIK 83
+Q+ + + SI
Sbjct: 59 LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIA 118
Query: 84 IWNLAVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
+W++A PT ++R L GH++++ VDF SG D IK+W+ + T G
Sbjct: 119 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNG 176
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H + I + + SG D +R+
Sbjct: 177 HKRGIA--CLQYRDRLVVSGSSDNTIRL 202
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.0 bits (172), Expect = 7e-14
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 13/111 (11%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+++ +G D + LW + C+ L GH V ++F N + + +G G IK+W+
Sbjct: 187 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--KRIVSGAYDGKIKVWD 244
Query: 87 L---------AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L A RTL H + + F + S S D I +WD
Sbjct: 245 LVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (95), Expect = 3e-04
Identities = 29/231 (12%), Positives = 56/231 (24%), Gaps = 20/231 (8%)
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP 193
I+ SK + D Q I SG D ++I L L
Sbjct: 7 RIHCRSETSKGVYC--LQYDDQKIVSGLRDNTIKI----------WDKNTLECKRILTGH 54
Query: 194 PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253
S + R + + + E+ +
Sbjct: 55 TGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKD 114
Query: 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS 313
A++ T + + S+S DRT+ W+
Sbjct: 115 RSIAVWDMASP-----TDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE 169
Query: 314 LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGW 363
V T + I L + ++ G ++ ++++ E
Sbjct: 170 FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHE 218
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 83.0 bits (203), Expect = 2e-17
Identities = 45/384 (11%), Positives = 85/384 (22%), Gaps = 86/384 (22%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC------IMSLSGHSTPVESVQF 66
AH A + ++ + D + +W + S H + + V
Sbjct: 12 AHDADIFSVSA---CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV 68
Query: 67 -------GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP--------- 110
++ SG + + + + + K + D
Sbjct: 69 LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 128
Query: 111 ------YGDYLCSGSLDSFIKLWDLRRKG------------------CIYTYRGHSKSIN 146
L + + +W + + S+
Sbjct: 129 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFAT 188
Query: 147 SIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHN 206
S+ S G IA+G +G V+I L SV FS
Sbjct: 189 SVDISERG-LIATGFNNGTVQISELSTLRPLYNFES-----QHSMINNSNSIRSVKFSPQ 242
Query: 207 TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN 266
SL G + E + + + S
Sbjct: 243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 302
Query: 267 RSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
+ D + FWD++ ++T + I
Sbjct: 303 TLCSA---------------------------GWDGKLRFWDVKTKERITTLNMHCDDIE 335
Query: 327 R----LTFSEGGECLLGGDTEGLK 346
L E G+ L +K
Sbjct: 336 IEEDILAVDEHGDSLAEPGVFDVK 359
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.5 bits (181), Expect = 1e-14
Identities = 37/210 (17%), Positives = 65/210 (30%), Gaps = 33/210 (15%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST------P 60
E M + + ++ ++ATG ++ V + L + + +
Sbjct: 176 TVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 233
Query: 61 VESVQFGNGEETLSAGCQSGSIKIW----------------NLAVPTVQRTLNGHKSSIT 104
+ SV+F L+ S S H S +
Sbjct: 234 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVM 293
Query: 105 SVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI----NSIRFSPDGQWIASG 160
S+ F+ G+ LCS D ++ WD++ K I T H I + + G +A
Sbjct: 294 SLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP 353
Query: 161 GEDGVVRI-----GASFHLTNTSIHVVDLS 185
G V + N S+ V L
Sbjct: 354 GVFDVKFLKKGWRSGMGADLNESLCCVCLD 383
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 60.3 bits (144), Expect = 4e-10
Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 16/93 (17%)
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC------IYTYRGHS 142
+ T H + I SV + S S D ++K+WD + Y++ H
Sbjct: 4 IATAN-AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK 60
Query: 143 KSINSIRF-------SPDGQWIASGGEDGVVRI 168
++ + + + +A+ G +
Sbjct: 61 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLF 93
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.4 bits (199), Expect = 4e-17
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 99 HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158
H+S + S+ F G + S D+ + W I+ S S+ S S D ++I
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIV 322
Query: 159 SGGEDGVVRI 168
+G D +
Sbjct: 323 TGSGDKKATV 332
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.1 bits (167), Expect = 4e-13
Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Query: 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDF 108
L H + V S++F + + + + W SS+ S D
Sbjct: 256 PDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDI 314
Query: 109 HPYGDYLCSGSLDSFIKLWDL 129
Y+ +GS D ++++
Sbjct: 315 SVDDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.5 bits (163), Expect = 2e-12
Identities = 21/114 (18%), Positives = 34/114 (29%), Gaps = 8/114 (7%)
Query: 57 HSTPVESVQF-GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
S P S +G+ I TL H + +V ++
Sbjct: 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHV 66
Query: 116 CSGSLDSFIKLWDL-----RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164
+G +K+WD+ + I S + PDG + GGE
Sbjct: 67 YTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.1 bits (162), Expect = 2e-12
Identities = 43/332 (12%), Positives = 96/332 (28%), Gaps = 24/332 (7%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
GQ+ + + + ++ H V +V N + G + G +K+W+
Sbjct: 20 DGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGK-GCVKVWD 78
Query: 87 LA-----VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH 141
++ P Q + I S P G L G S + +WDL
Sbjct: 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT 138
Query: 142 SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSV 201
S + + + N ++ + + S +
Sbjct: 139 SSAPACYALAISPDSK---------VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 189
Query: 202 PFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED--QAGEEELFATIANPCDYSAIF 259
S++ + + + + +++++ + G +A + S +
Sbjct: 190 DISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVE 249
Query: 260 QPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE 319
H + SL S+ D +N W + + +
Sbjct: 250 VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFV-----STGKDNLLNAWRTPYGASIFQS- 303
Query: 320 KNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
K SS++ S + ++ G + K +E
Sbjct: 304 KESSSVLSCDISVDDKYIVTGSGDK-KATVYE 334
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.7 bits (127), Expect = 4e-08
Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
H + V L G+ + G D +N W I S+ V S +
Sbjct: 261 LHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDD 318
Query: 71 ETLSAGCQSGSIKIWNL 87
+ + G ++ +
Sbjct: 319 KYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.3 bits (121), Expect = 3e-07
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 98 GHKSSITSVDFHPYGD---YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154
G S + FH D D+ I R I T H + + ++ S
Sbjct: 5 GAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPT 63
Query: 155 QWIASGGEDGVVRI 168
+ + +GG G V++
Sbjct: 64 RHVYTGG-KGCVKV 76
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (102), Expect = 5e-05
Identities = 55/306 (17%), Positives = 96/306 (31%), Gaps = 30/306 (9%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI-----MSLSGHSTPVESVQFGN 68
HG V + + + + TGG V +W + + + S +
Sbjct: 50 HGEVVCAVTISN-PTRHVYTGGKGC-VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS--SITSVDFHPYGDYLCSGSLDSFIKL 126
TL G ++ ++ IW+LA PT + S + ++ P S D I +
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL 186
WDL + + ++GH+ + I S DG + +GG D VR S
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE-GRQLQQHDFTSQ 226
Query: 187 VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246
+ LG P +V + K + E S A + F
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK------YQLHLHESCVLSLKFAYCGKWF 280
Query: 247 ATIANPCDYSAIF---QPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT 303
+ D S+ +S V S I + + S D+
Sbjct: 281 VSTGK--DNLLNAWRTPYGASIFQSKESSSV----LSCDISVDDKYIV-----TGSGDKK 329
Query: 304 VNFWDL 309
+++
Sbjct: 330 ATVYEV 335
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 80.3 bits (196), Expect = 9e-17
Identities = 41/346 (11%), Positives = 96/346 (27%), Gaps = 11/346 (3%)
Query: 14 HGASV-NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
H SV CL + TG DDK + ++ ++ LSGH V ++++ +G
Sbjct: 11 HMTSVITCLQF---EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGIL 67
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKS-SITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
+S + + + + Y+ +GS D+ + +W L +
Sbjct: 68 VSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK 127
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG 191
+ + + + + + + N + + +
Sbjct: 128 ESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWD 187
Query: 192 TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIAN 251
+ + + + R A +D T + E+ + + +
Sbjct: 188 VAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVG 247
Query: 252 PCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT-----SSSADRTVNF 306
S F + + S + S + S ++ N
Sbjct: 248 LLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNI 307
Query: 307 WDLEKFSLVSTT-EKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
++L LV K++ I + F + +
Sbjct: 308 YNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEILD 353
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 76.5 bits (186), Expect = 2e-15
Identities = 18/118 (15%), Positives = 44/118 (37%), Gaps = 1/118 (0%)
Query: 93 QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152
+ TL GH +S+ + +Y+ +G+ D I+++D K + GH + +++++
Sbjct: 5 RTTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH 63
Query: 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR 210
G ++ + V + ++ V S + +L
Sbjct: 64 GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 121
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.0 bits (112), Expect = 3e-06
Identities = 14/78 (17%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS-LSGHSTPVESVQFGNG 69
F H +++ + S +L +G ++ + N++ L + + + + + SV F G
Sbjct: 277 FSYHHTNLSAITTFYVSDNILVSGSEN-QFNIYNLRSGKLVHANILKDADQIWSVNF-KG 334
Query: 70 EETLSAGCQSGSIKIWNL 87
+ ++A + G + L
Sbjct: 335 KTLVAAVEKDGQSFLEIL 352
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.3 bits (87), Expect = 0.003
Identities = 7/67 (10%), Positives = 22/67 (32%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQY 356
+ + D+ + +D + + + L ++ GG + G ++V+ +
Sbjct: 28 TGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCT 87
Query: 357 DAQPMGW 363
Sbjct: 88 HVFEGHN 94
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 80.3 bits (196), Expect = 1e-16
Identities = 13/155 (8%), Positives = 34/155 (21%), Gaps = 18/155 (11%)
Query: 28 GQVLATGGDDKKVNLW-------ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
+ L + + + + T AG
Sbjct: 190 SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 249
Query: 81 SIKIWNLAVPTV-------QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + V L + + Y + +D++ +
Sbjct: 250 NDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR- 308
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++ +R S D + + +DG +
Sbjct: 309 ---KVTEVKNNLTDLRLSADRKTVMVRKDDGKIYT 340
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 59.5 bits (142), Expect = 6e-10
Identities = 13/113 (11%), Positives = 32/113 (28%), Gaps = 5/113 (4%)
Query: 26 KSGQVLATGGDDKKVNLW-ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84
++G+ + + G I+ L G + G +
Sbjct: 243 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLK 302
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
+++ R + K+++T + + D I + L + T
Sbjct: 303 YDVK----TRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERT 351
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 47.9 bits (112), Expect = 3e-06
Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 4/68 (5%)
Query: 102 SITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160
S + DF P GD + S + D+ + I +R D +
Sbjct: 4 SKFAEDFSPLDGDLIAFVSRGQ-AFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIH 60
Query: 161 GEDGVVRI 168
G +
Sbjct: 61 GTREGDFL 68
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 46.0 bits (107), Expect = 1e-05
Identities = 13/118 (11%), Positives = 26/118 (22%), Gaps = 8/118 (6%)
Query: 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP 110
I + + + G +I ++++ + S + F
Sbjct: 130 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT-TENSHDYAPAFDA 188
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGC-------IYTYRGHSKSINSIRFSPDGQWIASGG 161
L S S D + S N + P +G
Sbjct: 189 DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGE 246
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 42.2 bits (97), Expect = 2e-04
Identities = 8/78 (10%), Positives = 24/78 (30%), Gaps = 4/78 (5%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
+ + + + + ++ + ++ +T+ G I +
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVKTR----KVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
Query: 86 NLAVPTVQRTLNGHKSSI 103
L P +RT+ K +
Sbjct: 342 PLEKPEDERTVETDKRPL 359
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.2 bits (92), Expect = 8e-04
Identities = 10/79 (12%), Positives = 26/79 (32%), Gaps = 5/79 (6%)
Query: 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS--FIKLWDLRRKGCIYT 137
G I +++ V + I V F+ ++D R G
Sbjct: 24 GQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDY-RTGKAEK 80
Query: 138 YRGHSKSINSIRFSPDGQW 156
+ + ++ ++ +G++
Sbjct: 81 FEENLGNVFAMGVDRNGKF 99
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 80.7 bits (197), Expect = 1e-16
Identities = 7/72 (9%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 99 HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSPDGQW 156
I+ ++ + + + +++ ++ + H+ + + ++PD
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 157 IASGGEDGVVRI 168
I + G D +
Sbjct: 66 IVTCGTDRNAYV 77
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 68.0 bits (164), Expect = 1e-12
Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Query: 55 SGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA--VPTVQRTLNGHKSSITSVDFHPYG 112
S P+ + ++ + + I+ + L H +T VD+ P
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGH 141
+ + + D +W L+ + T
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPTLVIL 92
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.5 bits (155), Expect = 2e-11
Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 10/182 (5%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
+ + V+ + +G +A D V L K + +L+ + P+ +V F
Sbjct: 196 ESSSSCGWVHGVC-FSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITE 254
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
++AG ++ + + G +LD
Sbjct: 255 SSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEG- 312
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQW----IASGGEDGVVRIGASFHLTNTSIHVVDLS 185
H S++ I G+ + G DG + I + + + + DL
Sbjct: 313 SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSI---WDVRSLESALKDLK 369
Query: 186 LV 187
+V
Sbjct: 370 IV 371
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.6 bits (150), Expect = 7e-11
Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 9/160 (5%)
Query: 17 SVNCLALGKKSGQVLATGGDDKKVNLWAL--GKSNCIMSLSGHSTPVESVQFGNGEETLS 74
++C A K +A ++ +V+++ K + L H+ V V + +
Sbjct: 9 PISCHAW-NKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 75 AGCQSGSIKIWNLAVPTVQRTLNGH--KSSITSVDFHPYGDYLCSGSLDSFIKLWDL--- 129
+ +W L T + TL + V + P GS I +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 130 -RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C + + ++ S+ + P+ +A+G D RI
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 167
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.0 bits (120), Expect = 4e-07
Identities = 46/373 (12%), Positives = 91/373 (24%), Gaps = 119/373 (31%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLW-------------------- 43
K + + H V + + T G D+ +W
Sbjct: 40 KWVQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAA 98
Query: 44 ----------------------------ALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75
C + V S+ + L+A
Sbjct: 99 RCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 158
Query: 76 GCQSGSIKIWNLAVPTVQR------------------TLNGHKSSITSVDFHPYGDYLCS 117
G +I++ + V+ + + V F G +
Sbjct: 159 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW 218
Query: 118 GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNT 177
S DS + L D +K + T + + ++ F + +A+G + V
Sbjct: 219 VSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLF-------TY 271
Query: 178 SIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237
LS L P+ +S + + K G+ A
Sbjct: 272 DSAAGKLSFGGRLDV--PKQSSQRGLTARERFQNLDKKASSEGSAAA------------- 316
Query: 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS 297
+ + H++ S + +S+L C T+
Sbjct: 317 -----------------GAGLDSLHKN------------SVSQISVLSGGKAKCSQFCTT 347
Query: 298 SSADRTVNFWDLE 310
D ++ WD+
Sbjct: 348 GM-DGGMSIWDVR 359
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.5 bits (98), Expect = 1e-04
Identities = 6/32 (18%), Positives = 12/32 (37%)
Query: 137 TYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ + I+ ++ D IA + V I
Sbjct: 2 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHI 33
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 74.3 bits (180), Expect = 6e-15
Identities = 39/293 (13%), Positives = 81/293 (27%), Gaps = 35/293 (11%)
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-GHSKSINSIR 149
++ + GH +IT++ G L S + I WD+ + H+ I I+
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG------------------ 191
+ G +D + + A ++S V + PLG
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 192 -------------TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238
+ + ++ +K +E
Sbjct: 123 AIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI 182
Query: 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS 298
+ D S P+ N S + + + S + +
Sbjct: 183 TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATG 242
Query: 299 SADRTVNFWDLEKFSLVSTTEKNS---STIRRLTFSEGGECLLGGDTEGLKVY 348
S D +V W++ K S K + S++ + + + G +K +
Sbjct: 243 SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 52.7 bits (124), Expect = 7e-08
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 75 AGCQSGSIKIWNLAVPTVQRTL--NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
G S+ +WN+ P+ + H S + + S DS IK W++
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 51.5 bits (121), Expect = 2e-07
Identities = 31/300 (10%), Positives = 80/300 (26%), Gaps = 17/300 (5%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEET 72
H ++ L+ G+ L + + +N W + H+T + ++ +
Sbjct: 11 HNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT-TSKGD 68
Query: 73 LSAGCQSGSIKIWNL---AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
L +K+ V + + N S + GD +
Sbjct: 69 LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG 128
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189
+ +Y ++++ + + L+ S+ V +
Sbjct: 129 KLTEVPISYNSSCVALSNDKQFVAVGGQ--------DSKVHVYKLSGASVSEVKTIVHPA 180
Query: 190 LGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249
T + RK + + A+ + +
Sbjct: 181 EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA 240
Query: 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309
D S I + + + + +S++ + + S+ D + FW++
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIV---SAGQDSNIKFWNV 297
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.5 bits (181), Expect = 8e-15
Identities = 8/71 (11%), Positives = 18/71 (25%), Gaps = 3/71 (4%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSINSIRF 150
+ K I+ + P L S D + ++ + + + F
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF 64
Query: 151 SPDGQWIASGG 161
+ G
Sbjct: 65 IDNTDLQIYVG 75
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 72.2 bits (175), Expect = 4e-14
Identities = 18/177 (10%), Positives = 50/177 (28%), Gaps = 25/177 (14%)
Query: 36 DDKKVNLWALGKSNCI----MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91
++ +V + L + +E + G + +
Sbjct: 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227
Query: 92 ---------------VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIY 136
+ + S++F P +L + D I W+L+ + I
Sbjct: 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK 287
Query: 137 TYRGHSKSINSIRFSPDGQWIASGGEDGVVRI----GASFHLTNTSIHVVDLSLVHP 189
+ + + ++ + + D + + L +SI+++ +P
Sbjct: 288 NFAKFN-EDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIF-DYENP 342
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.1 bits (128), Expect = 3e-08
Identities = 43/335 (12%), Positives = 94/335 (28%), Gaps = 36/335 (10%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL---SGHSTPVESVQFGNG 69
A ++ + + S +L D + ++ + L + P+ F +
Sbjct: 9 APKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN 67
Query: 70 EETL--SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ Q +K+ + P+ Q N + D L + S D I++
Sbjct: 68 TDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVI 127
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV 187
D R G + S N+ + + + N+ + L L
Sbjct: 128 DPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSS-------RLIVGMNNSQVQWFRLPLC 180
Query: 188 HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247
+ L K ++ V ++ + + +
Sbjct: 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA--- 237
Query: 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307
F+ HR + S+ P+ L +D ++ W
Sbjct: 238 -----------FRCHRLNLKDTNLA---YPVNSIEFSPRHKFLYTA-----GSDGIISCW 278
Query: 308 DLEKFSLVSTTEK-NSSTIRRLTFSEGGECLLGGD 341
+L+ + K N ++ ++ S+ CL D
Sbjct: 279 NLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSD 313
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.3 bits (126), Expect = 6e-08
Identities = 11/97 (11%), Positives = 27/97 (27%), Gaps = 4/97 (4%)
Query: 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL---NGHKSSITS 105
+ + ++ + L GS+ ++ + L +K +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 106 VDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIYTYRGH 141
+F D + G++ I DL +
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNN 98
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.5 bits (124), Expect = 1e-07
Identities = 5/35 (14%), Positives = 12/35 (34%)
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ + I+ I+ P + DG + +
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTV 37
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.8 bits (104), Expect = 3e-05
Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 8/104 (7%)
Query: 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN 68
VN + + + L T G D ++ W L I + + + V+
Sbjct: 245 LKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNLQTRKKIKNFAKFN-EDSVVKIAC 302
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDF--HP 110
+ L + K + +T+ + SSI + +P
Sbjct: 303 SDNILCLATSDDTFKTNAA----IDQTIELNASSIYIIFDYENP 342
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 71.9 bits (174), Expect = 4e-14
Identities = 35/287 (12%), Positives = 67/287 (23%), Gaps = 18/287 (6%)
Query: 75 AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC 134
C S+ + T H T P G Y SG + +++WD +
Sbjct: 33 QYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 92
Query: 135 IYT--YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT 192
I S + I + + + I +G + L
Sbjct: 93 ILKTTIPVFSGPVKDISWDSESKRI--------AAVGEGRERFGHVFLFDTGTSNGNLTG 144
Query: 193 PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANP 252
S S + E +
Sbjct: 145 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLF 204
Query: 253 CDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT------SSSADRTVNF 306
GT V + ++ + + S+SAD+T+
Sbjct: 205 ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKI 264
Query: 307 WDLEKFSLVSTTEKNSS-TIRRLTFSEGGECLLGGDTEGLKVYGWEP 352
W++ + T + ++L + L+ G + P
Sbjct: 265 WNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG-FINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 70.3 bits (170), Expect = 1e-13
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P++ RT G + P GD + + S + + Y HS +
Sbjct: 10 PSLPRTARGT---AVVLGNTPAGDKIQYCNGTS-VYTVPVGSLTDTEIYTEHSHQTTVAK 65
Query: 150 FSPDGQWIASGGEDGVVRI 168
SP G + ASG G VRI
Sbjct: 66 TSPSGYYCASGDVHGNVRI 84
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 55.7 bits (132), Expect = 9e-09
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS-SITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+++ +IKIWN+A V++T+ + L S S + FI +
Sbjct: 251 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 48.4 bits (113), Expect = 2e-06
Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHS-TPVESVQFGNGEETLSAGCQSGSIKI 84
G +A+ DK + +W + ++ + + + ++ L + +G I
Sbjct: 248 PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINF 307
Query: 85 WNL 87
N
Sbjct: 308 VNP 310
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 68.4 bits (165), Expect = 5e-13
Identities = 35/304 (11%), Positives = 78/304 (25%), Gaps = 21/304 (6%)
Query: 46 GKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITS 105
G + ++SGH+ + ++ L +G G I W+ H + I S
Sbjct: 1 GHDEVLKTISGHNKGITALTV----NPLISGSYDGRIMEWS-----SSSMHQDHSNLIVS 51
Query: 106 VDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+D +Y WD K T + DG +D +
Sbjct: 52 LDNSKAQEYSSIS--------WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDL 103
Query: 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225
+ + + S+ + L + T +
Sbjct: 104 LILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRA 163
Query: 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285
+ I + S + + S T ++S
Sbjct: 164 KPSYI---SISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGA 220
Query: 286 QSPMLCFILTTSSSADRTVNFWDLEKFS-LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
+ L + S D + + +++ ++ + + L + + G
Sbjct: 221 NEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADAC 280
Query: 345 LKVY 348
+K +
Sbjct: 281 IKRW 284
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.4 bits (139), Expect = 9e-10
Identities = 17/94 (18%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 36 DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-TVQR 94
+ +++ I ++S + + E+ ++ G +I I+++ P + +
Sbjct: 193 SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK 252
Query: 95 TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
LN HK + ++ + L S D+ IK W+
Sbjct: 253 ALNAHKDGVNNLLWET-PSTLVSSGADACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.2 bits (115), Expect = 8e-07
Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVESVQFGNG 69
++ + + ++ATG D + ++++ + I +L+ H V ++ +
Sbjct: 210 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP 269
Query: 70 EETLSAGCQSGSIKIWN 86
+S+G IK WN
Sbjct: 270 STLVSSG-ADACIKRWN 285
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 63.0 bits (151), Expect = 4e-11
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 10/93 (10%)
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS-FIKLWDLRRKG--CIYT 137
SI + + +P T T + + P + + S F++ D +
Sbjct: 2 SISLKEI-IPPQPSTQRNF---TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQ 57
Query: 138 YRGH-SKSINSIRFSP--DGQWIASGGEDGVVR 167
+ GH S + +++FSP Q++ SG E G V
Sbjct: 58 FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVI 90
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 61.9 bits (148), Expect = 9e-11
Identities = 41/298 (13%), Positives = 76/298 (25%), Gaps = 19/298 (6%)
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQ--RTLNGHKSS-ITSVDFHPYGD--YLCSGSLDS 122
+S ++ + V GH SS +T+V F P YLCSG
Sbjct: 28 TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESG 87
Query: 123 FIKLWDLRRKGCIYT--------YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174
+ +W + ++ + I+ I + +G+ + GE
Sbjct: 88 KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD 147
Query: 175 TNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234
+ S+ V Q + F +G P A + +
Sbjct: 148 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSF 207
Query: 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294
+ + + I D +S
Sbjct: 208 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFA 267
Query: 295 TTSSSADRTVNFWDLEKFSLVST----TEKNSSTIRRLTFSEGGECLLGGDTEGLKVY 348
T AD T+ WD+ V ++ + + + G + L Y
Sbjct: 268 T--VGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.7 bits (119), Expect = 3e-07
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG---NGEETLSAGCQSGSIKI 84
Q AT G D + +W + S C+ + + + Q G G + + G++
Sbjct: 263 SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNF 322
Query: 85 WNL 87
+ L
Sbjct: 323 YEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.9 bits (117), Expect = 6e-07
Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI--TSVDFHPYGD-YLCSGSLDSFIKLW 127
+ + +I++W++ + K + V G+ + S SLD + +
Sbjct: 264 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323
Query: 128 DL 129
+L
Sbjct: 324 EL 325
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 59.8 bits (143), Expect = 5e-10
Identities = 13/113 (11%), Positives = 32/113 (28%), Gaps = 3/113 (2%)
Query: 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDFHPYGDYL 115
S +F + ++ + +L + + P
Sbjct: 207 FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ 266
Query: 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
G L+ + +DL+++ I + + F G + GG + +
Sbjct: 267 IYGVLNR-LAKYDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLYLGGTFNDLAV 317
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 53.6 bits (127), Expect = 5e-08
Identities = 13/118 (11%), Positives = 31/118 (26%), Gaps = 1/118 (0%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
Q AT L T + + ++ + ++L
Sbjct: 220 KQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDL 279
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
+ + N + V F GD L G + + +++ + + +
Sbjct: 280 KQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDM 336
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 43.6 bits (101), Expect = 7e-05
Identities = 5/63 (7%), Positives = 17/63 (26%), Gaps = 2/63 (3%)
Query: 108 FHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-GHSKSINSIRFSPDGQWI-ASGGEDGV 165
+Y+ + + + + D+ + + +PD + G
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 166 VRI 168
+
Sbjct: 64 IYG 66
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 59.4 bits (142), Expect = 6e-10
Identities = 15/141 (10%), Positives = 33/141 (23%), Gaps = 4/141 (2%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
+ + + + S + + +L
Sbjct: 168 EDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227
Query: 89 VPTVQRT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ + S +P + ++ +DL + I S S
Sbjct: 228 TGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV-PLPHSYYS 284
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ S DG + GG G +
Sbjct: 285 VNVSTDGSTVWLGGALGDLAA 305
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 54.8 bits (130), Expect = 2e-08
Identities = 31/311 (9%), Positives = 77/311 (24%), Gaps = 29/311 (9%)
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTL--NGHKSSITSVDFHPYGDYLC-SGSLDSFIKL 126
+ + A + + + + V + + + P G + + +
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 127 WDLRRKGCIYTYRGHS-----KSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHV 181
DL + + KS+ SPDG+ +A + +
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 182 VDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSF--------------TKGRPGGTKAKIDV 227
+L P+ + + ++ + S + +P +
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETY 180
Query: 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN-----RSGTCVPVSVSRTSLS 282
+ + A + P T +
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD 240
Query: 283 ILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDT 342
+ S + T + A + +DLEK + + + + S G + G
Sbjct: 241 VFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGA 299
Query: 343 EGLKVYGWEPA 353
G + ++
Sbjct: 300 LG-DLAAYDAE 309
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 51.3 bits (121), Expect = 3e-07
Identities = 20/130 (15%), Positives = 38/130 (29%), Gaps = 6/130 (4%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
+ L M N +T + ++ ++L
Sbjct: 209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAF-GAYNVLESFDL 267
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD---LRRKGCIYTYRGHSKS 144
+ + S SV+ G + G + +D L +KG + S S
Sbjct: 268 EKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMS 326
Query: 145 INSIR-FSPD 153
+ S+R F+ D
Sbjct: 327 LASVRLFTRD 336
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 53.3 bits (126), Expect = 6e-08
Identities = 11/146 (7%), Positives = 34/146 (23%), Gaps = 3/146 (2%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ + ++ + L + L + + ++ H +
Sbjct: 211 WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR 270
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL--CSGSLDSFIKLWD 128
+ S + + + I S++ L + D + + D
Sbjct: 271 DEWRHKTASRFVVVLDAKTGERLAKFEMGHE-IDSINVSQDEKPLLYALSTGDKTLYIHD 329
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDG 154
+ + I + G
Sbjct: 330 AESGEELRSVNQLGHGPQVITTADMG 355
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 44.0 bits (102), Expect = 6e-05
Identities = 17/145 (11%), Positives = 37/145 (25%), Gaps = 27/145 (18%)
Query: 28 GQVLATGGDDKKVNLWAL--GKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
L K++ L G + + ++ + + + G A ++
Sbjct: 206 AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYL 265
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
D + F+ + D + + + I
Sbjct: 266 ----------------------LVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEI 302
Query: 146 NSIRFSPDGQW--IASGGEDGVVRI 168
+SI S D + A D + I
Sbjct: 303 DSINVSQDEKPLLYALSTGDKTLYI 327
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 50.6 bits (120), Expect = 6e-07
Identities = 19/134 (14%), Positives = 36/134 (26%), Gaps = 7/134 (5%)
Query: 79 SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL-----RRKG 133
+G I + + + ++ L+ + + G YL D + + DL
Sbjct: 41 AGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 99
Query: 134 CIYTYRGHSKSINSIRFSPDGQW-IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT 192
I S + ++ IA I L I
Sbjct: 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 159
Query: 193 PPPQYTSSVPFSHN 206
P +++ SH
Sbjct: 160 HPEPRVAAILASHY 173
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 39.8 bits (92), Expect = 0.001
Identities = 46/331 (13%), Positives = 84/331 (25%), Gaps = 66/331 (19%)
Query: 85 WNLAVPTVQR----TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
W + V R + ++ SV G I L D
Sbjct: 11 WKVHVAPEDRPTQQMNDWDLENLFSVTLRDAGQ----------IALIDGSTYEIKTVLDT 60
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS 200
+++ R S G+++ G DG V + + T++ + +G+ +S
Sbjct: 61 G-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI------KIGSEARSIETS 113
Query: 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQ 260
A P Y +
Sbjct: 114 KMEGWEDKY-----------------------------------AIAGAYWPPQYVIMDG 138
Query: 261 PHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320
+ + ++ P + IL + + VN + K LV T+
Sbjct: 139 ETLEPKKIQSTRGMTYDEQE---YHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDL 195
Query: 321 NSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMGWGKVQDLA----VTGTQL 376
N+ ++ L G +G Y A + + K L G
Sbjct: 196 NNLKTTEIS---AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP 252
Query: 377 WFRRVGTWSHQDSGFSTLDSYSAGSPVSTMG 407
R + H G S+ V+ +G
Sbjct: 253 HPGRGANFVHPTFGPVWATSHMGDDSVALIG 283
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 48.8 bits (115), Expect = 2e-06
Identities = 32/261 (12%), Positives = 63/261 (24%), Gaps = 14/261 (5%)
Query: 79 SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+G I + + + + ++ ++ G YL D+ I + DL K
Sbjct: 41 AGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 99
Query: 139 R-----GHSKSINSIRFSPDGQW-IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT 192
+S + ++ IA I L I V
Sbjct: 100 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTY 159
Query: 193 PPPQYTSSVPFSHNTSLRKSFTKGR------PGGTKAKIDVTRIEENAESEDQA-GEEEL 245
P +++ SH K + VT I D
Sbjct: 160 HPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHR 219
Query: 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305
+ A + S P + +TS D +++
Sbjct: 220 YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSIS 279
Query: 306 FWDLEKFSLVSTTEKNSSTIR 326
+ + K + ++
Sbjct: 280 LIGTDPKNHPQYAWKKVAELQ 300
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.9 bits (105), Expect = 3e-05
Identities = 28/204 (13%), Positives = 49/204 (24%), Gaps = 34/204 (16%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
A S + K ++ A K + + PV S
Sbjct: 222 MTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR-----GANFVHPKYGPVWSTSHLGDG 276
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC-------SGSLDSF 123
G + + L G + HP +L +
Sbjct: 277 SISLIGTDPKNHPQYA---WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS 333
Query: 124 IKLWDLRRKGCIYTYRGHS---------KSINSIRFSPDGQ------WIASGGEDGVVRI 168
+ ++DL+ Y + K + ++ G W +V +
Sbjct: 334 VAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVV 393
Query: 169 GASFHLTNTSIHVV-DLSLVHPLG 191
T VV D L+ P G
Sbjct: 394 DDK---TLKLKAVVKDPRLITPTG 414
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.1 bits (95), Expect = 5e-04
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173
+ + I L D K + +++ R S G+++ G D + + +
Sbjct: 34 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWA 92
Query: 174 LTNTSIHVVDLSLVH 188
T + + + +
Sbjct: 93 KEPTKVAEIKIGIEA 107
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Score = 48.0 bits (114), Expect = 3e-06
Identities = 23/161 (14%), Positives = 52/161 (32%), Gaps = 27/161 (16%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K+G G V + G+S + P +G+ ++ G S ++ +
Sbjct: 227 KAGNFKTIGDSKVPV-VDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVI 285
Query: 86 NLA-VPTVQRTLNGHKSSIT----------SVDFHPYGDYLCSGSLDSFIKLWDL----- 129
+ + + + +I F G+ + +DS + W++
Sbjct: 286 AIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIK 345
Query: 130 ----------RRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160
R+K + GH+ + + DG+W+
Sbjct: 346 HYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVL 386
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 44.2 bits (103), Expect = 5e-05
Identities = 17/163 (10%), Positives = 43/163 (26%), Gaps = 24/163 (14%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
+ A+ +G + ++ Q + A S
Sbjct: 183 CPASLAASDLAAAPAAAGIVGAQ----CTGAQNCSSQAAQANYPGMLVWAVASSILQGDI 238
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG----- 140
A T++ ++G++S + +F G + + ++ +
Sbjct: 239 PAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSS 298
Query: 141 -------------HSKSINSIRFSPDGQW--IASGGEDGVVRI 168
+ ++I + DG A+ V+ I
Sbjct: 299 VTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDI 341
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 40.2 bits (92), Expect = 7e-04
Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 117 SGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI-ASGGEDGVVRI 168
+ S I + D+ T S + SPDG + + V I
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSI 58
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 845 | |||
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.98 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.98 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.98 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.97 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.97 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.96 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.96 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.96 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.96 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.95 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.95 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.95 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.94 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.94 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.93 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.93 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.92 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.91 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.91 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.9 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.89 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.88 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.88 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.88 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.86 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.86 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.84 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.84 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.82 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.77 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.76 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.76 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.74 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.74 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.65 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.55 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.52 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.5 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.47 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.32 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.28 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.21 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.1 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.97 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.93 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.87 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.85 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.81 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.77 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.76 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.75 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.73 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.72 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.71 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.68 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.66 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.56 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.55 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.54 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.32 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.25 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.22 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.76 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.54 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.53 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 97.39 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 97.27 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 97.14 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.1 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 97.01 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.91 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.89 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.72 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 96.7 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 96.67 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 96.58 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.53 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.44 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.32 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 96.3 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.68 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 95.52 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 94.54 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 93.46 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 93.24 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 93.03 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 89.17 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 88.11 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 87.2 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 85.64 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 85.45 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 84.61 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 81.09 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.9e-37 Score=322.89 Aligned_cols=301 Identities=22% Similarity=0.388 Sum_probs=266.2
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
...|+||.+.|++|+|+| ++++||||+.||+|+|||+.+++.+.++.+|...|.+++|++++.++++++.++.+.+|+.
T Consensus 10 ~~~L~GH~~~I~~l~~sp-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (317)
T d1vyhc1 10 KYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 88 (317)
T ss_dssp SCEEECCSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred cEEEcCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccc
Confidence 357999999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
...+....+..|...+.++.|+++++.+++++.|+.+++||+++++.+..+..|...+.+++|++++++|++++.|+.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~ 168 (317)
T d1vyhc1 89 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168 (317)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEE
Confidence 99998888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ |+..++.. +..+.++... +
T Consensus 169 ~-------------~~~~~~~~--------------------~~~~~~~~~~-------i-------------------- 188 (317)
T d1vyhc1 169 V-------------WVVATKEC--------------------KAELREHRHV-------V-------------------- 188 (317)
T ss_dssp E-------------EETTTCCE--------------------EEEECCCSSC-------E--------------------
T ss_pred E-------------Eeecccee--------------------eEEEecCCCC-------c--------------------
Confidence 9 99998877 6666666655 5
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts 327 (845)
..+.++|+.... ............+..++. ++++++.|+.|++||+.+++++.++.+|...|++
T Consensus 189 -------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~ 252 (317)
T d1vyhc1 189 -------ECISWAPESSYS----SISEATGSETKKSGKPGP-----FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 252 (317)
T ss_dssp -------EEEEECCSCGGG----GGGGCCSCC-------CC-----EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred -------eEEEEeeccccc----eeeccccceeeeeccCCc-----eeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEE
Confidence 666677665411 111112222333444555 8999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
++|+|+|++|++|+.|| |+|||+.+++++.++.+|.+.|++++|+ ++++|+++ |.+|.
T Consensus 253 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 253 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp EEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 99999999999999999 9999999999999999999999999999 88888876 88883
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-34 Score=311.00 Aligned_cols=279 Identities=17% Similarity=0.279 Sum_probs=240.6
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee-----EEEecCCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC-----IMSLSGHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~-----i~~l~~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
..++++ +|...|+|++|+| +|++||+|+ ||.|+|||+.++.. .....+|...|.+++|+|++++|++|+.||
T Consensus 43 ~~~~~~-~H~~~V~~v~fs~-~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg 119 (337)
T d1gxra_ 43 RQINTL-NHGEVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119 (337)
T ss_dssp EEEEEE-CCSSCCCEEEECS-SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS
T ss_pred eEEEEC-CCCCcEEEEEECC-CCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccc
Confidence 345555 7999999999999 999999987 79999999975432 233457999999999999999999999999
Q ss_pred cEEEEECCCC--cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 81 SIKIWNLAVP--TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 81 tV~VWDl~tg--~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
.|++||+... +....+..|...+.+++|+|++.++++++.|+.|++||+.++++......|...|.+++|++++..++
T Consensus 120 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~ 199 (337)
T d1gxra_ 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLW 199 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999998754 55677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+++.|+.+++ ||+++++. +..+. +... +
T Consensus 200 ~~~~d~~v~i-------------~d~~~~~~--------------------~~~~~-~~~~-------i----------- 227 (337)
T d1gxra_ 200 TGGLDNTVRS-------------WDLREGRQ--------------------LQQHD-FTSQ-------I----------- 227 (337)
T ss_dssp EEETTSEEEE-------------EETTTTEE--------------------EEEEE-CSSC-------E-----------
T ss_pred cccccccccc-------------ccccccee--------------------ecccc-cccc-------e-----------
Confidence 9999999999 99988776 43332 2222 3
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT 318 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl 318 (845)
.+++|+|++. ++++|+.|+.|++||+++++.. ..
T Consensus 228 ----------------~~l~~~~~~~-----------------------------~l~~~~~d~~i~i~d~~~~~~~-~~ 261 (337)
T d1gxra_ 228 ----------------FSLGYCPTGE-----------------------------WLAVGMESSNVEVLHVNKPDKY-QL 261 (337)
T ss_dssp ----------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTSSCEE-EE
T ss_pred ----------------EEEEEccccc-----------------------------ccceeccccccccccccccccc-cc
Confidence 4455555554 9999999999999999988765 45
Q ss_pred cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 319 EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 319 ~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
..|...|++++|+|+|++|++++.|+ |++||+.+++.+..+. |.+.|++++|+ ++++|+++ |.+|.+
T Consensus 262 ~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 262 HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred cccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 67899999999999999999999999 9999999999887765 78899999999 88988876 999964
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-33 Score=307.24 Aligned_cols=289 Identities=22% Similarity=0.353 Sum_probs=238.2
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec------------------CCCCCeEEEEEcCC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS------------------GHSTPVESVQFGNG 69 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~------------------~h~~~V~sLafSpd 69 (845)
+....+|.+.|+||+|+| +|++||+|+ |+.|+|||+.+++.+..+. .|...|++++|+|+
T Consensus 55 l~~~~~H~~~V~~l~fs~-dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 132 (388)
T d1erja_ 55 LHKSLDHTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 132 (388)
T ss_dssp EEEEEECSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred eEeeCCCCCcEEEEEECC-CCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCC
Confidence 344457999999999999 999999986 8899999999988877664 35677999999999
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEE
Q psy467 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149 (845)
Q Consensus 70 g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLa 149 (845)
+++|++|+.||.|++||...++.+..+.+|...|.+++|++++..+++++.++.|++||..+.........+...+....
T Consensus 133 ~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 212 (388)
T d1erja_ 133 GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV 212 (388)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred CCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999888877775555444444
Q ss_pred EecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEee
Q psy467 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229 (845)
Q Consensus 150 fSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~ 229 (845)
+.+++++|++++.||.|++ ||..++.. +..+......
T Consensus 213 ~~~~~~~l~~~~~d~~i~i-------------~~~~~~~~--------------------~~~~~~~~~~---------- 249 (388)
T d1erja_ 213 SPGDGKYIAAGSLDRAVRV-------------WDSETGFL--------------------VERLDSENES---------- 249 (388)
T ss_dssp CSTTCCEEEEEETTSCEEE-------------EETTTCCE--------------------EEEEC---------------
T ss_pred cCCCCCeEEEEcCCCeEEE-------------eecccCcc--------------------ceeecccccc----------
Confidence 4458899999999999999 99988776 3322111000
Q ss_pred ecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEEC
Q psy467 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 230 i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl 309 (845)
...+...|.+++|+|+++ +|++|+.||.|++||+
T Consensus 250 -----------------------------------------~~~h~~~v~~l~~s~~~~-----~l~s~~~d~~i~iwd~ 283 (388)
T d1erja_ 250 -----------------------------------------GTGHKDSVYSVVFTRDGQ-----SVVSGSLDRSVKLWNL 283 (388)
T ss_dssp ------------------------------------------CCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEEC
T ss_pred -----------------------------------------ccCCCCCEEEEEECCCCC-----EEEEEECCCcEEEEec
Confidence 001224466667777766 9999999999999999
Q ss_pred CCCe------------EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc----
Q psy467 310 EKFS------------LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT---- 372 (845)
Q Consensus 310 ~s~~------------~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS---- 372 (845)
.++. +......|...|++++|+|+|++|++|+.|| |++||+.+++++.++.+|.+.|++++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~ 363 (388)
T d1erja_ 284 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSS 363 (388)
T ss_dssp ---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCT
T ss_pred cCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcc
Confidence 7643 3445567889999999999999999999999 9999999999999999999999999864
Q ss_pred ---CCceEEEE-----EEEEeeC
Q psy467 373 ---GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 373 ---dg~lLaaS-----VsiW~~d 387 (845)
++.+|+++ |.+|.+.
T Consensus 364 ~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 364 LGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp TCTTCEEEEEEETTSEEEEEEEE
T ss_pred cCCCCCEEEEEeCCCEEEEEeee
Confidence 56778776 9999763
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=8.7e-34 Score=305.52 Aligned_cols=277 Identities=16% Similarity=0.220 Sum_probs=238.8
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~ 92 (845)
.+.+.+.+++++| +|+.||.++ ++.|.+|++.+++..+.+.+|...|++++|+|+|++||+|+.||+|++||+.++..
T Consensus 15 ~~r~~~~~~a~~~-~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~ 92 (311)
T d1nr0a1 15 TARGTAVVLGNTP-AGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 92 (311)
T ss_dssp CCTTCCCCCEECT-TSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred CCCCCeEEEEEcC-CCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccc
Confidence 3556778899999 899999886 55799999999999999999999999999999999999999999999999988754
Q ss_pred --EEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCE-EEEEeCCCcEE
Q psy467 93 --QRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW-IASGGEDGVVR 167 (845)
Q Consensus 93 --v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~-Lasgs~DG~I~ 167 (845)
...+..|...|.+++|+|++++|++++. +..+++|++.+++....+.+|...|.+++|+|++++ |++|+.|+.|+
T Consensus 93 ~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~ 172 (311)
T d1nr0a1 93 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVA 172 (311)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEE
T ss_pred ccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeecccccccccc
Confidence 3567889999999999999999999886 456999999999999999999999999999999885 78899999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ ||+++++. ...+..|... |
T Consensus 173 i-------------~d~~~~~~--------------------~~~~~~~~~~-------i-------------------- 192 (311)
T d1nr0a1 173 I-------------FEGPPFKF--------------------KSTFGEHTKF-------V-------------------- 192 (311)
T ss_dssp E-------------EETTTBEE--------------------EEEECCCSSC-------E--------------------
T ss_pred c-------------cccccccc--------------------cccccccccc-------c--------------------
Confidence 9 99998776 5555555555 4
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec-------C
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE-------K 320 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~-------g 320 (845)
.++.|+|++. ++++++.|+.|++||..++..+..+. +
T Consensus 193 -------~~v~~~p~~~-----------------------------~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~ 236 (311)
T d1nr0a1 193 -------HSVRYNPDGS-----------------------------LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVA 236 (311)
T ss_dssp -------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCS
T ss_pred -------cccccCcccc-----------------------------cccccccccccccccccccccccccccccccccc
Confidence 5566666655 99999999999999999998888765 5
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCC---CeEEEEEcCCceEEEE----EEEEeeC
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWG---KVQDLAVTGTQLWFRR----VGTWSHQ 387 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~---~VtsVafSdg~lLaaS----VsiW~~d 387 (845)
|.+.|++++|+|+|++|++|+.|+ |+|||+.+++++.++..|.. .+.++.|++..+++++ |.+|..|
T Consensus 237 h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 237 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 311 (311)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred ccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence 788999999999999999999999 99999999999999887653 4567777766666666 9999754
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.8e-32 Score=290.16 Aligned_cols=283 Identities=21% Similarity=0.312 Sum_probs=249.8
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
+...++|+||.+.|+||+|+| ++++||+|+.||+|+|||+.+++.+..+..|...|.+++|+|++.++++|+.|+.+.+
T Consensus 45 ~~~~~tL~GH~~~I~~l~~s~-~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~ 123 (340)
T d1tbga_ 45 MRTRRTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred eeeeEEECCCCCCEEEEEECC-CCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeec
Confidence 344678999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCC----cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 85 WNLAVP----TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 85 WDl~tg----~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
|+.... .....+.+|.......... .+..++....+.....|+............+...+....+.+.+.+++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (340)
T d1tbga_ 124 YNLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EESSSSCSCCCEEEEECCCSSCEEEEEEE-ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred ccccccccccccceecccccccccccccc-cccccccccccccccccccccccccccccccceeEeeeccccccceeEEe
Confidence 998654 4556677777766655554 45678888899999999998888888888888899999999999999999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
+.|+.+++ ||+++++. +..+.+|... |
T Consensus 203 ~~d~~v~i-------------~d~~~~~~--------------------~~~~~~h~~~-------i------------- 229 (340)
T d1tbga_ 203 ACDASAKL-------------WDVREGMC--------------------RQTFTGHESD-------I------------- 229 (340)
T ss_dssp ETTTEEEE-------------EETTTTEE--------------------EEEECCCSSC-------E-------------
T ss_pred ecCceEEE-------------EECCCCcE--------------------EEEEeCCCCC-------e-------------
Confidence 99999999 99998887 6677666665 5
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec-
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE- 319 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~- 319 (845)
.+++|+|++. +|++|+.||.|++||+.....+..+.
T Consensus 230 --------------~~v~~~p~~~-----------------------------~l~s~s~d~~i~~~~~~~~~~~~~~~~ 266 (340)
T d1tbga_ 230 --------------NAICFFPNGN-----------------------------AFATGSDDATCRLFDLRADQELMTYSH 266 (340)
T ss_dssp --------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred --------------EEEEECCCCC-----------------------------EEEEEeCCCeEEEEeeccccccccccc
Confidence 5666666666 99999999999999999998877764
Q ss_pred -CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 320 -KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 320 -gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
.+...|++++|+|+|++|++|+.|| |++||+.+++++..+.+|.+.|++++|+ ++++|+++ |.+|.
T Consensus 267 ~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 4567899999999999999999999 9999999999999999999999999999 88888876 89994
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.9e-32 Score=297.39 Aligned_cols=259 Identities=15% Similarity=0.164 Sum_probs=207.0
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe--eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~ 92 (845)
..+|+|++|+| +|++||+|+.||.|+||+..+++ .+..+.+|..+|.+++|+|++++|++|+.|++|+|||+.++..
T Consensus 7 ~~pIt~~~~s~-dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~ 85 (371)
T d1k8kc_ 7 VEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 85 (371)
T ss_dssp SSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred CCCeEEEEECC-CCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence 47899999999 99999999999999999997765 6677899999999999999999999999999999999987754
Q ss_pred E--EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce----EEEEcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 93 Q--RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC----IYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 93 v--~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~----l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
. ..+.+|...|++++|+|++++|++++.|+.|++|++..... ......|...|.+++|+|++++|++|+.|+.+
T Consensus 86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v 165 (371)
T d1k8kc_ 86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC 165 (371)
T ss_dssp EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEE
Confidence 4 44567888999999999999999999999999999866543 23345688899999999999999999999999
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
++ ||............ .....-.+.+..+....+
T Consensus 166 ~v-------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~------------------------------- 199 (371)
T d1k8kc_ 166 RI-------------FSAYIKEVEERPAP--TPWGSKMPFGELMFESSS------------------------------- 199 (371)
T ss_dssp EE-------------EECCCTTTSCCCCC--BTTBSCCCTTCEEEECCC-------------------------------
T ss_pred EE-------------EeeccCcccccccc--ccccccccceeeeeeccC-------------------------------
Confidence 99 99876554111100 000000011111111111
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEE
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vt 326 (845)
+...+.+++|+|+++ +|++++.|+.|++||+.++..+..+..|..+|.
T Consensus 200 ---------------------------~~~~v~~~~~s~~g~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~ 247 (371)
T d1k8kc_ 200 ---------------------------SCGWVHGVCFSANGS-----RVAWVSHDSTVCLADADKKMAVATLASETLPLL 247 (371)
T ss_dssp ---------------------------CSSCEEEEEECSSSS-----EEEEEETTTEEEEEEGGGTTEEEEEECSSCCEE
T ss_pred ---------------------------ccCcEEEEEeecccc-----cccccccCCcceEEeeecccceeeeecccccce
Confidence 224566777777777 899999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEEeCCCEEEEEecC
Q psy467 327 RLTFSEGGECLLGGDTEGLKVYGWEP 352 (845)
Q Consensus 327 slafSpdG~~Lasgs~DGI~IWDl~t 352 (845)
+++|+|+|++|++|.++.+++|.++.
T Consensus 248 s~~fs~d~~~la~g~d~~~~~~~~~~ 273 (371)
T d1k8kc_ 248 AVTFITESSLVAAGHDCFPVLFTYDS 273 (371)
T ss_dssp EEEEEETTEEEEEETTSSCEEEEEET
T ss_pred eeeecCCCCEEEEEcCCceEEEEeeC
Confidence 99999999988877654477776553
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3.5e-32 Score=292.92 Aligned_cols=254 Identities=21% Similarity=0.317 Sum_probs=214.4
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEecCCCCCeEEEEEcCCCCEEEEEEC--CCcEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQ--SGSIK 83 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~~h~~~V~sLafSpdg~~LaSgs~--DGtV~ 83 (845)
.+.|.+|.+.|+|++|+| +|++||+|+.||+|+|||+.+++. ...+..|...|.+++|+|++++|++++. +..++
T Consensus 51 ~~~~~~H~~~v~~~~~sp-~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~ 129 (311)
T d1nr0a1 51 TEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 129 (311)
T ss_dssp CEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred eEEEcCCCCCEEEEEEeC-CCCeEeccccCceEeeeeeeccccccccccccccCcccccccccccccccccccccccccc
Confidence 367889999999999999 999999999999999999987754 3567889999999999999999999986 45699
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCE-EEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDY-LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
+|++++++....+.+|...|++++|+|++++ |++|+.||.|++||+++++....+..|...|.++.|+|+++++++++.
T Consensus 130 v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~ 209 (311)
T d1nr0a1 130 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG 209 (311)
T ss_dssp EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ccccccccccccccccccccccccccccceeeecccccccccccccccccccccccccccccccccccCccccccccccc
Confidence 9999999999999999999999999999875 788999999999999999999999999999999999999999999999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
|+.+++ ||..++.. +..+.....
T Consensus 210 d~~v~~-------------~d~~~~~~--------------------~~~~~~~~~------------------------ 232 (311)
T d1nr0a1 210 DGTIVL-------------YNGVDGTK--------------------TGVFEDDSL------------------------ 232 (311)
T ss_dssp TSCEEE-------------EETTTCCE--------------------EEECBCTTS------------------------
T ss_pred cccccc-------------cccccccc--------------------ccccccccc------------------------
Confidence 999999 99987766 333221110
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
....+...|++++|+|+++ +|++|+.||.|+|||+++++++.++..|.
T Consensus 233 ---------------------------~~~~h~~~V~~~~~s~~~~-----~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~ 280 (311)
T d1nr0a1 233 ---------------------------KNVAHSGSVFGLTWSPDGT-----KIASASADKTIKIWNVATLKVEKTIPVGT 280 (311)
T ss_dssp ---------------------------SSCSSSSCEEEEEECTTSS-----EEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred ---------------------------ccccccccccccccCCCCC-----EEEEEeCCCeEEEEECCCCcEEEEEECCC
Confidence 0111234566777777776 99999999999999999999999998764
Q ss_pred C-CEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 323 S-TIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 323 ~-~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
. ....+.+.+++..|++++.|| |++||.+
T Consensus 281 ~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 281 RIEDQQLGIIWTKQALVSISANGFINFVNPE 311 (311)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred CccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence 3 233344455566899999999 9999964
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-31 Score=286.21 Aligned_cols=241 Identities=21% Similarity=0.382 Sum_probs=213.4
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC--CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK--SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t--~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
...+|.+.|.+++|+| ++++|++|+.||.|++||+.. ++....+..|...|.+++|+|++.++++++.++.|.+|++
T Consensus 92 ~~~~h~~~I~~v~~s~-dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~ 170 (337)
T d1gxra_ 92 DCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp ECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eecCCCCcEEEEEEcC-CCCEEEEeecccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3568999999999999 999999999999999999864 4566778889999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
.+++.......|...|.+++|++++..+++++.|+.|++||+++++.+..+. +...|.+++|+|++++|++++.|+.++
T Consensus 171 ~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~ 249 (337)
T d1gxra_ 171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVE 249 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccceeecccc-cccceEEEEEcccccccceeccccccc
Confidence 9999999999999999999999999999999999999999999999888775 788999999999999999999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ ||+.++.. . ....|... |
T Consensus 250 i-------------~d~~~~~~--------------------~-~~~~~~~~-------i-------------------- 268 (337)
T d1gxra_ 250 V-------------LHVNKPDK--------------------Y-QLHLHESC-------V-------------------- 268 (337)
T ss_dssp E-------------EETTSSCE--------------------E-EECCCSSC-------E--------------------
T ss_pred c-------------cccccccc--------------------c-cccccccc-------c--------------------
Confidence 9 99987654 2 22233333 3
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts 327 (845)
..++|+|++. +|++|+.||.|++||+.+++++..+. |...|++
T Consensus 269 -------~~v~~s~~g~-----------------------------~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~ 311 (337)
T d1gxra_ 269 -------LSLKFAYCGK-----------------------------WFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLS 311 (337)
T ss_dssp -------EEEEECTTSS-----------------------------EEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEE
T ss_pred -------ceEEECCCCC-----------------------------EEEEEeCCCeEEEEECCCCCEEEEcc-CCCCEEE
Confidence 4455555554 99999999999999999999988765 6789999
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl 350 (845)
++|+|+|++|++|+.|+ |+|||+
T Consensus 312 ~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 312 CDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEeCCCCEEEEEeCCCeEEEEEE
Confidence 99999999999999999 999997
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-30 Score=269.98 Aligned_cols=251 Identities=22% Similarity=0.415 Sum_probs=231.8
Q ss_pred cceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
++++|++ +++.+|.+.|.+++|+| ++.++++++.++.+.+|+....+....+.+|...+.++.|+++++.+++
T Consensus 40 ~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (317)
T d1vyhc1 40 TIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 118 (317)
T ss_dssp CEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCCcEEEEeeec-ccccccccccccccccccccccccccccccccccceeeeccCCCceEEe
Confidence 4788874 67999999999999999 9999999999999999999999988889999999999999999999999
Q ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC-
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG- 154 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg- 154 (845)
++.|+.+++||+.+++.+..+.+|...+.+++|++++++|++++.|+.|++|++.++..+..+..|...+.+++|+|++
T Consensus 119 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 198 (317)
T d1vyhc1 119 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESS 198 (317)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCG
T ss_pred eccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred -------------------CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec
Q psy467 155 -------------------QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 155 -------------------~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~ 215 (845)
.++++++.|+.|++ ||+.+++. +..+.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~-------------~~~~~~~~--------------------~~~~~~ 245 (317)
T d1vyhc1 199 YSSISEATGSETKKSGKPGPFLLSGSRDKTIKM-------------WDVSTGMC--------------------LMTLVG 245 (317)
T ss_dssp GGGGGGCCSCC-------CCEEEEEETTSEEEE-------------EETTTTEE--------------------EEEEEC
T ss_pred cceeeccccceeeeeccCCceeEeccCCCEEEE-------------EECCCCcE--------------------EEEEeC
Confidence 46889999999999 99998887 777777
Q ss_pred CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 216 GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 216 h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
|... + ..++++|++. +|
T Consensus 246 ~~~~-------v---------------------------~~~~~~~~~~-----------------------------~l 262 (317)
T d1vyhc1 246 HDNW-------V---------------------------RGVLFHSGGK-----------------------------FI 262 (317)
T ss_dssp CSSC-------E---------------------------EEEEECSSSS-----------------------------CE
T ss_pred CCCC-------E---------------------------EEEEECCCCC-----------------------------EE
Confidence 6665 5 6666666666 89
Q ss_pred EEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 296 TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
++|+.||.|++||+.+++++.++.+|.+.|++++|+|++++|++|+.|+ |+|||
T Consensus 263 ~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 263 LSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp EEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 9999999999999999999999999999999999999999999999999 99997
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=3.6e-30 Score=279.96 Aligned_cols=255 Identities=20% Similarity=0.360 Sum_probs=207.4
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
.+|...|++++|+| ++++|++|+.||.|++|+...++.+..+.+|...|.+++|++++..+++++.++.|++||..+..
T Consensus 118 ~~~~~~V~~l~~s~-~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 196 (388)
T d1erja_ 118 PSSDLYIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 196 (388)
T ss_dssp -CCCCBEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred cCCCCCEEEEEECC-CCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccc
Confidence 46788899999999 99999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc-------CCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-------GHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 92 ~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-------~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
.......+...+....+.+++++|++++.||.|++||+.++..+..+. +|...|.+++|+|++++|++++.||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~ 276 (388)
T d1erja_ 197 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 276 (388)
T ss_dssp EEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCC
Confidence 888777555544444444588999999999999999999988776653 5788999999999999999999999
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
.|++ ||+.++.... ........ .
T Consensus 277 ~i~i-------------wd~~~~~~~~--------------------~~~~~~~~-------~----------------- 299 (388)
T d1erja_ 277 SVKL-------------WNLQNANNKS--------------------DSKTPNSG-------T----------------- 299 (388)
T ss_dssp EEEE-------------EEC------------------------------------------C-----------------
T ss_pred cEEE-------------EeccCCcccc--------------------cccccccc-------c-----------------
Confidence 9999 9998776511 11000000 0
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~ 324 (845)
....+.. +...|.+++|+|+++ +|++|+.||.|++||+.+++++.++.+|.+.
T Consensus 300 ----------~~~~~~~------------~~~~v~~~~~s~~~~-----~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~ 352 (388)
T d1erja_ 300 ----------CEVTYIG------------HKDFVLSVATTQNDE-----YILSGSKDRGVLFWDKKSGNPLLMLQGHRNS 352 (388)
T ss_dssp ----------EEEEEEC------------CSSCEEEEEECGGGC-----EEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred ----------eeeeccc------------ccceEEEEEECCCCC-----EEEEEeCCCEEEEEECCCCcEEEEEeCCCCC
Confidence 0111111 123466777777776 9999999999999999999999999999999
Q ss_pred EEEEEE------eCCCCEEEEEeCCC-EEEEEec
Q psy467 325 IRRLTF------SEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 325 Vtslaf------SpdG~~Lasgs~DG-I~IWDl~ 351 (845)
|+++++ +|++.+||+|+.|| |+||+++
T Consensus 353 V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 353 VISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp EEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 999975 56899999999999 9999985
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.98 E-value=2.9e-30 Score=271.64 Aligned_cols=276 Identities=13% Similarity=0.164 Sum_probs=215.3
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-CCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
.+.+.||.+.|+|++|+| ++++||+|+.||+|++||+.+++.+..+. +|...|.+++|+|++.++ +++.|+.+++|+
T Consensus 5 ~~~~~GH~~~V~~l~~s~-dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~-~~~~d~~v~~~~ 82 (299)
T d1nr0a2 5 DQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF-TVSWDDHLKVVP 82 (299)
T ss_dssp EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEE-EEETTTEEEEEC
T ss_pred ceEcCCCCCCcEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceee-cccceeeEEEec
Confidence 578999999999999999 99999999999999999999999888874 689999999999998755 556799999999
Q ss_pred CCCCcE---EEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC
Q psy467 87 LAVPTV---QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 87 l~tg~~---v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D 163 (845)
...... ......+...+.+++|+++++.+++++ ++.+.+|+.. +..... ....+.+++|+|++++|++++.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~--~~~~~~--~~~~~~~~~~s~~~~~l~~g~~d 157 (299)
T d1nr0a2 83 AGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHG--KLTEVP--ISYNSSCVALSNDKQFVAVGGQD 157 (299)
T ss_dssp SSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETT--EEEEEE--CSSCEEEEEECTTSCEEEEEETT
T ss_pred cCCccccccccccccccccccccccccccccccccc-cccccccccc--cccccc--ccccccccccccccccccccccc
Confidence 865321 112234667889999999998776665 5689999954 333332 34567899999999999999999
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEE-EEecCCCCCccceeeEeeecccccccccccc
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRK-SFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~-~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
|.+++ ||+.++.. .. ....|...
T Consensus 158 g~i~~-------------~d~~~~~~--------------------~~~~~~~~~~~----------------------- 181 (299)
T d1nr0a2 158 SKVHV-------------YKLSGASV--------------------SEVKTIVHPAE----------------------- 181 (299)
T ss_dssp SEEEE-------------EEEETTEE--------------------EEEEEEECSSC-----------------------
T ss_pred ccccc-------------cccccccc--------------------ccccccccccc-----------------------
Confidence 99999 99876554 11 11122222
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE---Eec
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS---TTE 319 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~---tl~ 319 (845)
|++++|+|+++ +|++++.|+.|++||+.++.... .+.
T Consensus 182 -----------------------------------i~~~~~~~~~~-----~l~~~~~d~~i~~~~~~~~~~~~~~~~~~ 221 (299)
T d1nr0a2 182 -----------------------------------ITSVAFSNNGA-----FLVATDQSRKVIPYSVANNFELAHTNSWT 221 (299)
T ss_dssp -----------------------------------EEEEEECTTSS-----EEEEEETTSCEEEEEGGGTTEESCCCCCC
T ss_pred -----------------------------------ccccccccccc-----ccccccccccccccccccccccccccccc
Confidence 34444555554 99999999999999998876543 455
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEE--EecC-CCCCeEEEEEcCCceEEEE-----EEEEee
Q psy467 320 KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYD--AQPM-GWGKVQDLAVTGTQLWFRR-----VGTWSH 386 (845)
Q Consensus 320 gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~--tl~~-h~~~VtsVafSdg~lLaaS-----VsiW~~ 386 (845)
+|...|++++|+|+|++|++|+.|+ |+|||+.++.... .... +...|+.+.|.++++|+++ |.+|.+
T Consensus 222 ~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~s~D~~i~iWdl 297 (299)
T d1nr0a2 222 FHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297 (299)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred ccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCCCEEEEEeCCCEEEEEec
Confidence 7889999999999999999999999 9999999875432 2333 3456888877766666665 999975
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=1.2e-29 Score=268.52 Aligned_cols=314 Identities=18% Similarity=0.302 Sum_probs=203.7
Q ss_pred eEEeccCCCcE-EEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 8 AEDFMAHGASV-NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V-~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
..+|+||.+.| +|++| ++++||||+.||+|+|||+.+++.+.++.+|...|++++|+++ .+|++|+.|+.|++|+
T Consensus 5 ~~tL~GH~~~vitc~~~---~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~ 80 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF---EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWD 80 (355)
T ss_dssp EEEEECCSSSCEEEEEE---ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEE
T ss_pred cEEECCcCCCcEEEEEE---CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEeccccccccc
Confidence 45799998875 67766 5689999999999999999999999999999999999999985 5899999999999999
Q ss_pred CCCCcEEEEEcCCCC--CeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE-----------------------cCC
Q psy467 87 LAVPTVQRTLNGHKS--SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-----------------------RGH 141 (845)
Q Consensus 87 l~tg~~v~~l~~h~~--~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-----------------------~~h 141 (845)
+...+.......... .+....+++++.++++++.|+.|++||+.+....... ..|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d1nexb2 81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 160 (355)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred ccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeec
Confidence 998887766653333 3445567778888888888888888888654332211 111
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCcEEE-eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 142 SKSINSIRFSPDGQWIASGGEDGVVRI-GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 142 ~~~V~sLafSPdg~~Lasgs~DG~I~I-~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
...+ ..+.+++++++++..|+.+++ -. .....+..+... ......+.+++++..+..... ..
T Consensus 161 ~~~v--~~~~~~~~~~~~~~~d~~i~~~d~---~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-d~-- 223 (355)
T d1nexb2 161 MASV--RTVSGHGNIVVSGSYDNTLIVWDV---AQMKCLYILSGH---------TDRIYSTIYDHERKRCISASM-DT-- 223 (355)
T ss_dssp SSCE--EEEEEETTEEEEEETTSCEEEEET---TTTEEEEEECCC---------SSCEEEEEEETTTTEEEEEET-TS--
T ss_pred cccc--cccccccceeeeecccceeeeeec---ccccceeeeecc---------ccccccccccccceeeecccc-cc--
Confidence 2222 223344666666666666543 00 000011111110 112334455555554433211 11
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
.+.++++.... ....+ ..+...|.+++++++ +|++|+.
T Consensus 224 ---~i~i~d~~~~~--------------------~~~~~------------~~h~~~v~~~~~~~~-------~l~~~~~ 261 (355)
T d1nexb2 224 ---TIRIWDLENGE--------------------LMYTL------------QGHTALVGLLRLSDK-------FLVSAAA 261 (355)
T ss_dssp ---CEEEEETTTCC--------------------EEEEE------------CCCSSCCCEEEECSS-------EEEEECT
T ss_pred ---eEEeeeccccc--------------------ccccc------------ccccccccccccccc-------eeeeeec
Confidence 11121111000 00000 112234566666543 8999999
Q ss_pred CCeEEEEECCCCeEEEEecCCCCCEEEE-EEeCCCCEEEEEeCCC-EEEEEecCCceEE-EecCCCCCeEEEEEcCCceE
Q psy467 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRL-TFSEGGECLLGGDTEG-LKVYGWEPARQYD-AQPMGWGKVQDLAVTGTQLW 377 (845)
Q Consensus 301 DG~I~IWDl~s~~~l~tl~gh~~~Vtsl-afSpdG~~Lasgs~DG-I~IWDl~tgk~l~-tl~~h~~~VtsVafSdg~lL 377 (845)
||.|++||+++...... .|...+.++ ++++++++|++|+ |+ |+|||+++++++. .+.+|.+.|++++|++..++
T Consensus 262 dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~~~~ 338 (355)
T d1nexb2 262 DGSIRGWDANDYSRKFS--YHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLV 338 (355)
T ss_dssp TSEEEEEETTTCCEEEE--EECTTCCCCCEEEECSSEEEEEE-TTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETTEEE
T ss_pred ccccccccccccceecc--cccCCceEEEEEcCCCCEEEEEe-CCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCCeEE
Confidence 99999999998876543 444555554 5677888887776 66 9999999999885 56789999999999965666
Q ss_pred EEE-----EEEEeeC
Q psy467 378 FRR-----VGTWSHQ 387 (845)
Q Consensus 378 aaS-----VsiW~~d 387 (845)
+++ +.+|..|
T Consensus 339 ~~~s~dg~~~l~~~d 353 (355)
T d1nexb2 339 AAVEKDGQSFLEILD 353 (355)
T ss_dssp EEEESSSCEEEEEEE
T ss_pred EEEECCCcEEEEEEe
Confidence 554 7788765
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.4e-28 Score=258.78 Aligned_cols=277 Identities=22% Similarity=0.394 Sum_probs=196.4
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
+...+.|+||.+.|.+ ++++ +|++||||+.||+|+|||+.+++++.++.+|...|.+++|+++ +|++|+.|+.+++
T Consensus 6 ~~~~~~l~GH~~~V~s-~~~~-~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~ 81 (342)
T d2ovrb2 6 LKSPKVLKGHDDHVIT-CLQF-CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKV 81 (342)
T ss_dssp CCCCEEEECSTTSCEE-EEEE-ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEE
T ss_pred CCcCEEECCcCCceEE-EEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceecccccc
Confidence 3446789999999865 3555 7899999999999999999999999999999999999999874 9999999999999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEc--------------------------------------cCCCEEEEEECCCeEEE
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFH--------------------------------------PYGDYLCSGSLDSFIKL 126 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafs--------------------------------------pdg~~Lasgs~DG~I~I 126 (845)
|+............+...+...... +....+++++.|+.|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 161 (342)
T d2ovrb2 82 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 161 (342)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEE
T ss_pred cccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEE
Confidence 9998776655554444333332222 22334455555555555
Q ss_pred EECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCC
Q psy467 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHN 206 (845)
Q Consensus 127 WDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spd 206 (845)
||......+..+.+|...+..+ ++++.++++++.||.|++ ||++.++.
T Consensus 162 ~d~~~~~~~~~~~~~~~~~~~~--~~~~~~l~s~~~dg~i~~-------------~d~~~~~~----------------- 209 (342)
T d2ovrb2 162 WDPETETCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRV-------------WDVETGNC----------------- 209 (342)
T ss_dssp EEGGGTEEEEEECCCSSCEEEE--EECSSEEEEEETTSCEEE-------------EETTTCCE-----------------
T ss_pred eecccceeeEEEcCcccccccc--cCCCCEEEEEeCCCeEEE-------------eeccccee-----------------
Confidence 5555555555555554433332 223555555555555555 55555444
Q ss_pred CCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 207 TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 207 g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
+..+.+|... +.++++++
T Consensus 210 ---~~~~~~~~~~----------------------------------------------------------v~~~~~~~- 227 (342)
T d2ovrb2 210 ---IHTLTGHQSL----------------------------------------------------------TSGMELKD- 227 (342)
T ss_dssp ---EEEECCCCSC----------------------------------------------------------EEEEEEET-
T ss_pred ---eeEecccccc----------------------------------------------------------eeEEecCC-
Confidence 3333333322 23333332
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecC---CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec--
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK---NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP-- 360 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g---h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~-- 360 (845)
+ +|++|+.|+.|++||+...+....+.. |...+.++.++ ++++++|+.|| |+|||+++++++..+.
T Consensus 228 -~-----~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~ 299 (342)
T d2ovrb2 228 -N-----ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTL 299 (342)
T ss_dssp -T-----EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEEC
T ss_pred -C-----EEEEEcCCCEEEEEecccccccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEEEEEecc
Confidence 2 899999999999999999988888775 44566666664 56999999999 9999999999988764
Q ss_pred ---CCCCCeEEEEEc-CCceEEEE---------EEEEeeC
Q psy467 361 ---MGWGKVQDLAVT-GTQLWFRR---------VGTWSHQ 387 (845)
Q Consensus 361 ---~h~~~VtsVafS-dg~lLaaS---------VsiW~~d 387 (845)
+|.+.|++++|+ ++.+++++ +.+|..+
T Consensus 300 ~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~ 339 (342)
T d2ovrb2 300 ESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 339 (342)
T ss_dssp TTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred cCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCC
Confidence 467789999999 77777776 5666554
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=8.2e-29 Score=271.45 Aligned_cols=240 Identities=13% Similarity=0.159 Sum_probs=199.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc--EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce
Q psy467 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT--VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC 134 (845)
Q Consensus 57 h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~--~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~ 134 (845)
+..+|+|++|+|++++||+|+.||.|+|||+.+++ .+..+.+|.++|.+++|+|++++|++|+.|+.|++||+.++..
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~ 85 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 85 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence 35789999999999999999999999999998775 5677889999999999999999999999999999999987664
Q ss_pred E--EEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE
Q psy467 135 I--YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS 212 (845)
Q Consensus 135 l--~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~ 212 (845)
. ..+..|...|.+++|+|++++|++++.|+.+++ |++..... ...
T Consensus 86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i-------------~~~~~~~~--------------------~~~ 132 (371)
T d1k8kc_ 86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI-------------CYFEQEND--------------------WWV 132 (371)
T ss_dssp EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEE-------------EEEETTTT--------------------EEE
T ss_pred ccccccccccccccccccccccccceeecccCccee-------------eeeecccc--------------------ccc
Confidence 4 445678889999999999999999999999999 88765443 111
Q ss_pred EecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccc
Q psy467 213 FTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCF 292 (845)
Q Consensus 213 ~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~ 292 (845)
...... .+...|.+++|+|+++
T Consensus 133 ~~~~~~------------------------------------------------------~~~~~v~~v~~~p~~~---- 154 (371)
T d1k8kc_ 133 CKHIKK------------------------------------------------------PIRSTVLSLDWHPNSV---- 154 (371)
T ss_dssp EEEECT------------------------------------------------------TCCSCEEEEEECTTSS----
T ss_pred cccccc------------------------------------------------------cccccccccccccccc----
Confidence 100000 0112345555566555
Q ss_pred eEEEEEeCCCeEEEEECCC------------------CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 293 ILTTSSSADRTVNFWDLEK------------------FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 293 ~lLatgs~DG~I~IWDl~s------------------~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+|++|+.|+.|++||... +..+....+|...|.+++|+|+|++|++++.|+ |++||+.++
T Consensus 155 -~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~ 233 (371)
T d1k8kc_ 155 -LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 233 (371)
T ss_dssp -EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred -ceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecc
Confidence 999999999999999754 346677788999999999999999999999999 999999999
Q ss_pred ceEEEecCCCCCeEEEEEc-CCceEEEE----EEEEeeCC
Q psy467 354 RQYDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQD 388 (845)
Q Consensus 354 k~l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d~ 388 (845)
+.+..+..|..+|.+++|+ ++++|+++ +.+|..+.
T Consensus 234 ~~~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~ 273 (371)
T d1k8kc_ 234 MAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 273 (371)
T ss_dssp TEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred cceeeeecccccceeeeecCCCCEEEEEcCCceEEEEeeC
Confidence 9999999999999999999 99999887 56665543
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=7.5e-28 Score=259.39 Aligned_cols=278 Identities=15% Similarity=0.212 Sum_probs=216.4
Q ss_pred CcEEEEEEecCCCCEEEEEeCCC-eEEEEECCCC--eeEEEecCC-CCCeEEEEEcC--CCCEEEEEECCCcEEEEECCC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDK-KVNLWALGKS--NCIMSLSGH-STPVESVQFGN--GEETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG-~I~IWdl~t~--~~i~~l~~h-~~~V~sLafSp--dg~~LaSgs~DGtV~VWDl~t 89 (845)
+.+++++|+| +++.||.++.+. .|+.|+.... ..+..+.+| ...|++++|+| ++.+|++|+.||+|+|||+..
T Consensus 18 ~~~t~l~~~~-~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~ 96 (325)
T d1pgua1 18 NFTTHLSYDP-TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF 96 (325)
T ss_dssp TCCCCCEEET-TTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred CCeEEEEECC-CCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecC
Confidence 3578999999 899999887654 3566665433 346677777 46899999998 668999999999999999975
Q ss_pred CcE--------EEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCE-EE
Q psy467 90 PTV--------QRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW-IA 158 (845)
Q Consensus 90 g~~--------v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~-La 158 (845)
++. ...+..|.++|.+++|+++++++++++. ++.+.+|+..+++++..+.+|...|.+++|+|++.+ ++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 176 (325)
T d1pgua1 97 DKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSM 176 (325)
T ss_dssp EGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEE
T ss_pred CcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEE
Confidence 432 2334568899999999999999988764 678999999999999999999999999999998875 67
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+++.|+.+++ ||...++. ......+..
T Consensus 177 ~~~~d~~v~~-------------~d~~~~~~--------------------~~~~~~~~~-------------------- 203 (325)
T d1pgua1 177 TVGDDGSVVF-------------YQGPPFKF--------------------SASDRTHHK-------------------- 203 (325)
T ss_dssp EEETTTEEEE-------------EETTTBEE--------------------EEEECSSSC--------------------
T ss_pred Eeeccccccc-------------cccccccc--------------------ceecccccC--------------------
Confidence 8999999999 99876654 222211110
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT 318 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl 318 (845)
+...|++++|+|++.. ++++++.|+.|++||+++++++.++
T Consensus 204 -----------------------------------~~~~v~~v~~~pd~~~----~l~s~~~d~~i~iwd~~~~~~~~~l 244 (325)
T d1pgua1 204 -----------------------------------QGSFVRDVEFSPDSGE----FVITVGSDRKISCFDGKSGEFLKYI 244 (325)
T ss_dssp -----------------------------------TTCCEEEEEECSTTCC----EEEEEETTCCEEEEETTTCCEEEEC
T ss_pred -----------------------------------CCCccEEeeeccccce----eccccccccceeeeeeccccccccc
Confidence 1123455566665321 8999999999999999999999999
Q ss_pred cCCCCCEEEEEEe---CCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCC--eE--EEEEc-CCceEEEE----EEEEe
Q psy467 319 EKNSSTIRRLTFS---EGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGK--VQ--DLAVT-GTQLWFRR----VGTWS 385 (845)
Q Consensus 319 ~gh~~~VtslafS---pdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~--Vt--sVafS-dg~lLaaS----VsiW~ 385 (845)
.+|...+.++.|+ ++|++|++++.|+ |+|||+.+++++..+..|... +. ++.|. ++.+++++ |.+|.
T Consensus 245 ~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwd 324 (325)
T d1pgua1 245 EDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324 (325)
T ss_dssp CBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred cccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEE
Confidence 9998887766666 7899999999999 999999999999888776654 33 44455 45555555 99996
Q ss_pred e
Q psy467 386 H 386 (845)
Q Consensus 386 ~ 386 (845)
+
T Consensus 325 l 325 (325)
T d1pgua1 325 L 325 (325)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=3.9e-27 Score=248.81 Aligned_cols=252 Identities=23% Similarity=0.394 Sum_probs=216.4
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCCeEEEEEcCCCC
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~V~sLafSpdg~ 71 (845)
++++|+ ++.+.+|.+.|.+++|+| ++.++++|+.|+.+.+|+.... .....+.+|........... +.
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 155 (340)
T d1tbga_ 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DN 155 (340)
T ss_dssp EEEEEETTTTEEEEEEECSCSCEEEEEECT-TSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEE-TT
T ss_pred ceeeeecccceeEEEEecccccEEeeEeec-cceeeeeecccceeecccccccccccccceeccccccccccccccc-cc
Confidence 467887 467889999999999999 9999999999999999997543 45667788888777666654 56
Q ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEe
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafS 151 (845)
.++.+..+.....|.............+...+....+.+.+.++++++.|+.|++||+++++++..+.+|...|.+++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~ 235 (340)
T d1tbga_ 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF 235 (340)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEEC
Confidence 77778889999999999888888777788899999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 152 PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 152 Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
|++++|++++.||.+++ ||+..... +..+.....
T Consensus 236 p~~~~l~s~s~d~~i~~-------------~~~~~~~~--------------------~~~~~~~~~------------- 269 (340)
T d1tbga_ 236 PNGNAFATGSDDATCRL-------------FDLRADQE--------------------LMTYSHDNI------------- 269 (340)
T ss_dssp TTSSEEEEEETTSCEEE-------------EETTTTEE--------------------EEEECCTTC-------------
T ss_pred CCCCEEEEEeCCCeEEE-------------Eeeccccc--------------------ccccccccc-------------
Confidence 99999999999999999 99987665 333221111
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
...+.+++|+|+++ +|++|+.||.|++||+.+
T Consensus 270 -------------------------------------------~~~i~~~~~s~~~~-----~l~~g~~dg~i~iwd~~~ 301 (340)
T d1tbga_ 270 -------------------------------------------ICGITSVSFSKSGR-----LLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp -------------------------------------------CSCEEEEEECSSSC-----EEEEEETTSCEEEEETTT
T ss_pred -------------------------------------------cCceEEEEECCCCC-----EEEEEECCCEEEEEECCC
Confidence 12344555555555 999999999999999999
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
++++.++.+|.+.|++++|+|+|++|++|+.|| |+|||
T Consensus 302 ~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 999999999999999999999999999999999 99997
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.2e-26 Score=238.31 Aligned_cols=272 Identities=19% Similarity=0.361 Sum_probs=222.9
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
.+.+++.+.+|...|+|++| ++++||||+.||+|+|||+.+++++.++.+|...|.+++| ++++|++|+.|+.|+
T Consensus 4 ~~~~i~~~~~~~~~V~c~~~---d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~ 78 (293)
T d1p22a2 4 SLQRIHCRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 78 (293)
T ss_dssp CCCCEECCCSSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred eEEEEeccCCCCCCEEEEEE---cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeeccccccccc
Confidence 35667778889999999876 6899999999999999999999999999999999999987 578999999999999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc---eEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG---CIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~---~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
+|++..+........+... ...+.+....++++..++.+.+||..+.. ....+..|...+.++.+. ...++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~ 154 (293)
T d1p22a2 79 VWDVNTGEMLNTLIHHCEA--VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSA 154 (293)
T ss_dssp EEESSSCCEEEEECCCCSC--EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEE
T ss_pred ccccccccccccccccccc--cccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccc
Confidence 9999999888777644443 33455667789999999999999997654 344556788888887776 5678899
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
+.|+.+++ ||+++++. +..+.++... +
T Consensus 155 s~d~~i~~-------------~d~~~~~~--------------------~~~~~~~~~~-------v------------- 181 (293)
T d1p22a2 155 SGDRTIKV-------------WNTSTCEF--------------------VRTLNGHKRG-------I------------- 181 (293)
T ss_dssp ETTSEEEE-------------EETTTCCE--------------------EEEEECCSSC-------E-------------
T ss_pred cCCCceee-------------ecCCCCcE--------------------EEEEcccccc-------c-------------
Confidence 99999999 99998877 6666655544 3
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
..+.+ ++. .+++++.||.|++||+++.+.+..+.+
T Consensus 182 --------------~~~~~--~~~-----------------------------~l~~~~~dg~i~i~d~~~~~~~~~~~~ 216 (293)
T d1p22a2 182 --------------ACLQY--RDR-----------------------------LVVSGSSDNTIRLWDIECGACLRVLEG 216 (293)
T ss_dssp --------------EEEEE--ETT-----------------------------EEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred --------------ccccC--CCC-----------------------------eEEEecCCCEEEEEecccceeeeeecc
Confidence 33333 334 899999999999999999999999999
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC---------CceEEEecCCCCCeEEEEEcCCceEEEE-----EEEEe
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP---------ARQYDAQPMGWGKVQDLAVTGTQLWFRR-----VGTWS 385 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t---------gk~l~tl~~h~~~VtsVafSdg~lLaaS-----VsiW~ 385 (845)
|...+.+ +++++.+|++|+.|| |++||+.. ..++..+.+|.+.|++++|++. +|+++ |.+|.
T Consensus 217 ~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~-~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 217 HEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF-QIVSSSHDDTILIWD 293 (293)
T ss_dssp CSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSS-CEEECCSSSEEEEEC
T ss_pred cceeeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcCC-EEEEEecCCEEEEeC
Confidence 8888765 567888999999999 99999764 3467889999999999999644 45544 88883
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2.1e-27 Score=255.79 Aligned_cols=247 Identities=15% Similarity=0.211 Sum_probs=200.4
Q ss_pred eEEeccCC-CcEEEEEEecC-CCCEEEEEeCCCeEEEEECCCCee--------EEEecCCCCCeEEEEEcCCCCEEEEEE
Q psy467 8 AEDFMAHG-ASVNCLALGKK-SGQVLATGGDDKKVNLWALGKSNC--------IMSLSGHSTPVESVQFGNGEETLSAGC 77 (845)
Q Consensus 8 l~~L~gH~-~~V~~LafSp~-dg~~LaTgs~DG~I~IWdl~t~~~--------i~~l~~h~~~V~sLafSpdg~~LaSgs 77 (845)
+..+.+|. ..|++++|+|. ++.+||+|+.||+|+|||+..++. ...+..|..+|.+++|++++++|++++
T Consensus 55 ~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~ 134 (325)
T d1pgua1 55 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134 (325)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceee
Confidence 45788885 67999999983 678999999999999999864332 233567899999999999999998876
Q ss_pred C--CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCE-EEEEECCCeEEEEECCCCceEEEEc---CCCCCeEEEEEe
Q psy467 78 Q--SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY-LCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSINSIRFS 151 (845)
Q Consensus 78 ~--DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~t~~~l~~~~---~h~~~V~sLafS 151 (845)
. ++.+.+|++++++.+..+.+|...|.+++|+|++.+ +++++.|+.|++||....+....+. .|...|.+++|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~ 214 (325)
T d1pgua1 135 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 214 (325)
T ss_dssp CCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred ccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeec
Confidence 5 678999999999999999999999999999999865 6789999999999998877766654 467789999999
Q ss_pred cC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 152 PD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 152 Pd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
|+ +.+|++++.|+.|++ ||+++++. +..+.+|... +
T Consensus 215 pd~~~~l~s~~~d~~i~i-------------wd~~~~~~--------------------~~~l~~~~~~-------v--- 251 (325)
T d1pgua1 215 PDSGEFVITVGSDRKISC-------------FDGKSGEF--------------------LKYIEDDQEP-------V--- 251 (325)
T ss_dssp STTCCEEEEEETTCCEEE-------------EETTTCCE--------------------EEECCBTTBC-------C---
T ss_pred cccceeccccccccceee-------------eeeccccc--------------------cccccccccc-------c---
Confidence 96 688999999999999 99998877 6666666554 3
Q ss_pred cccccccccccchhhhhhccCCCceeEEEc---CCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEE
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQ---PHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fs---pdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IW 307 (845)
..+.|+ +++. +|++++.|+.|+||
T Consensus 252 ------------------------~~~~~s~~~~dg~-----------------------------~l~s~s~D~~i~iw 278 (325)
T d1pgua1 252 ------------------------QGGIFALSWLDSQ-----------------------------KFATVGADATIRVW 278 (325)
T ss_dssp ------------------------CSCEEEEEESSSS-----------------------------EEEEEETTSEEEEE
T ss_pred ------------------------ccceeeeeccCCC-----------------------------EEEEEeCCCeEEEE
Confidence 112221 3444 89999999999999
Q ss_pred ECCCCeEEEEecCCCCC--EEEEEEeCC-CCEEEEEeCCC-EEEEEe
Q psy467 308 DLEKFSLVSTTEKNSST--IRRLTFSEG-GECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 308 Dl~s~~~l~tl~gh~~~--VtslafSpd-G~~Lasgs~DG-I~IWDl 350 (845)
|+++++++..+..|... +..+++.+. +.+|++++.|| |+|||+
T Consensus 279 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 279 DVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp ETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred ECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 99999999988766543 334444432 34788999999 999995
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=5.5e-27 Score=245.36 Aligned_cols=281 Identities=11% Similarity=0.098 Sum_probs=206.2
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee---EEEecCCCCCeEEEEEcCC-CCEEEEEECCCc
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC---IMSLSGHSTPVESVQFGNG-EETLSAGCQSGS 81 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~---i~~l~~h~~~V~sLafSpd-g~~LaSgs~DGt 81 (845)
..++..++|++.|++|+|+| ++++||+|+.||+|+|||+.++.. +....+|..+|.+++|+++ +.+|++|+.||.
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp-~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~ 80 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred CeEEcCCCCCCCEEEEEEeC-CCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccc
Confidence 45677889999999999999 999999999999999999866543 2333469999999999986 458999999999
Q ss_pred EEEEECCCCcEEEEEcCCCCC-eEEEEEccCCCEEEEEECCCeEEEEECCCCce----EEEEcCC--CCCeEEEEEecCC
Q psy467 82 IKIWNLAVPTVQRTLNGHKSS-ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC----IYTYRGH--SKSINSIRFSPDG 154 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~-V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~----l~~~~~h--~~~V~sLafSPdg 154 (845)
|++|++..+........+... .....+.+++..+++++.++.+++||++++.. ......+ ......+.+.+++
T Consensus 81 v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (342)
T d1yfqa_ 81 ILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNS 160 (342)
T ss_dssp EEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECS
T ss_pred eeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccC
Confidence 999999988777666544443 44556667888999999999999999865432 2222222 2344567788889
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
..+++++.|+.+++ ||+........ .......... .
T Consensus 161 ~~~~~~~~d~~i~~-------------~~~~~~~~~~~-----------------~~~~~~~~~~-------~------- 196 (342)
T d1yfqa_ 161 SRLIVGMNNSQVQW-------------FRLPLCEDDNG-----------------TIEESGLKYQ-------I------- 196 (342)
T ss_dssp SEEEEEESTTEEEE-------------EESSCCTTCCC-----------------EEEECSCSSC-------E-------
T ss_pred CceeeecCCCcEEE-------------EecccCcccce-----------------eeeecccccc-------e-------
Confidence 99999999999999 99987665111 1111111111 1
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe-
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS- 313 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~- 313 (845)
....+.+. ++. .+++++.||.+.+|+.....
T Consensus 197 --------------------~~~~~~~~-----------------------~~~-----~~~~~s~dg~~~v~~~~~~~~ 228 (342)
T d1yfqa_ 197 --------------------RDVALLPK-----------------------EQE-----GYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp --------------------EEEEECSG-----------------------GGC-----EEEEEETTSEEEEEECCTTCC
T ss_pred --------------------eeeEeecC-----------------------CCC-----EEEeecCCCeEEEEEecCCcc
Confidence 22222222 122 89999999999999976431
Q ss_pred --------EEEE------ecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceE
Q psy467 314 --------LVST------TEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLW 377 (845)
Q Consensus 314 --------~l~t------l~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lL 377 (845)
.... ..+|...|++++|+|++++||+|+.|| |+|||+++++.+..+..+ ..+..++|+ +++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l 307 (342)
T d1yfqa_ 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNIL 307 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEE
T ss_pred eeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEE
Confidence 1111 124567899999999999999999999 999999999999888643 344456677 77777
Q ss_pred EEE
Q psy467 378 FRR 380 (845)
Q Consensus 378 aaS 380 (845)
+++
T Consensus 308 ~~a 310 (342)
T d1yfqa_ 308 CLA 310 (342)
T ss_dssp EEE
T ss_pred EEE
Confidence 766
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.1e-26 Score=256.28 Aligned_cols=283 Identities=18% Similarity=0.213 Sum_probs=209.5
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe------eEEEecCCCCCeEEEEEc------C-CC
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN------CIMSLSGHSTPVESVQFG------N-GE 70 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~------~i~~l~~h~~~V~sLafS------p-dg 70 (845)
-+-.....++|.+.|.++++++ ++++|++.|++|+|||..+.+ .......|...+..+... . ++
T Consensus 3 ~~~~~~~~~~H~~~I~~v~~~~---~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (393)
T d1sq9a_ 3 FIATANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFEL 79 (393)
T ss_dssp EEEEEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEE
T ss_pred eEeeeecCCcccCccEEEEEeC---CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCC
Confidence 3455677899999999999864 799999999999999975543 223334455555444331 1 33
Q ss_pred CEEEEEECCCcEEEEECCCCcEE-----EEE-----cCCCCCeEEEEEccC-----CCEEEEEECCCeEEEEECCCCc--
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQ-----RTL-----NGHKSSITSVDFHPY-----GDYLCSGSLDSFIKLWDLRRKG-- 133 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v-----~~l-----~~h~~~V~~lafspd-----g~~Lasgs~DG~I~IWDl~t~~-- 133 (845)
.++++++.||.|++|++...... ... ..+...+..++|.++ +.++++++.||.|++|++....
T Consensus 80 ~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~ 159 (393)
T d1sq9a_ 80 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 159 (393)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred cEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcc
Confidence 56789999999999997643211 111 124456778888775 3688999999999999984211
Q ss_pred -------------eEEE---EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCC
Q psy467 134 -------------CIYT---YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY 197 (845)
Q Consensus 134 -------------~l~~---~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~ 197 (845)
.... ...+...+.+++|+|++ +|++|+.||.|++ ||+.+++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~i-------------wd~~~~~~-------- 217 (393)
T d1sq9a_ 160 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQI-------------SELSTLRP-------- 217 (393)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEE-------------EETTTTEE--------
T ss_pred cceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEE-------------Eeeccccc--------
Confidence 1111 12345668999999987 8999999999999 99998877
Q ss_pred CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccC
Q psy467 198 TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVS 277 (845)
Q Consensus 198 i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~ 277 (845)
+..+..... ...+...
T Consensus 218 ------------~~~~~~~~~----------------------------------------------------l~~h~~~ 233 (393)
T d1sq9a_ 218 ------------LYNFESQHS----------------------------------------------------MINNSNS 233 (393)
T ss_dssp ------------EEEEECCC-------------------------------------------------------CCCCC
T ss_pred ------------ccccccccc----------------------------------------------------cccccce
Confidence 433322110 0112345
Q ss_pred ceeEEEcCCCCcccceEEEEEeCCC---eEEEEECCCCeEEEEec-------------CCCCCEEEEEEeCCCCEEEEEe
Q psy467 278 RTSLSILPQSPMLCFILTTSSSADR---TVNFWDLEKFSLVSTTE-------------KNSSTIRRLTFSEGGECLLGGD 341 (845)
Q Consensus 278 I~slafSPdg~~~~~~lLatgs~DG---~I~IWDl~s~~~l~tl~-------------gh~~~VtslafSpdG~~Lasgs 341 (845)
|++++|+|||+ +|++|+.|+ .|++||+.+++++..+. +|.+.|++++|+|||++|++|+
T Consensus 234 V~~l~~spdg~-----~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s 308 (393)
T d1sq9a_ 234 IRSVKFSPQGS-----LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 308 (393)
T ss_dssp EEEEEECSSTT-----EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred EEEcccccccc-----eeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEEC
Confidence 66667777766 999999887 49999999998888774 7999999999999999999999
Q ss_pred CCC-EEEEEecCCceEEEecCCCCCeE----EEEEc-CCceEEEE
Q psy467 342 TEG-LKVYGWEPARQYDAQPMGWGKVQ----DLAVT-GTQLWFRR 380 (845)
Q Consensus 342 ~DG-I~IWDl~tgk~l~tl~~h~~~Vt----sVafS-dg~lLaaS 380 (845)
.|+ |+|||+++++++.++.+|.+.|. .++|+ ++..++.+
T Consensus 309 ~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~ 353 (393)
T d1sq9a_ 309 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP 353 (393)
T ss_dssp TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred CCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEc
Confidence 999 99999999999999999998876 47888 77766543
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=5.9e-26 Score=237.32 Aligned_cols=265 Identities=14% Similarity=0.182 Sum_probs=207.1
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
-..+++|.||.++|++++|+| |++|+.||+|++||+.++ ..+|...|.+++|+++ ..+++++.|++|++
T Consensus 3 ~~~i~~l~gH~~~I~~l~~s~-----l~sgs~Dg~v~~Wd~~~~-----~~~h~~~V~~~~~~~~-~~~~s~s~D~~v~~ 71 (287)
T d1pgua2 3 DEVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKA-QEYSSISWDDTLKV 71 (287)
T ss_dssp EEEEEEECCCSSCEEEEETTT-----TEEEETTSCEEETTTTEE-----ECCCCSCEEEEECCST-TCCEEEETTTEEEE
T ss_pred cceeEEECCCCCceEEEEECc-----EEEEeCCCeEEEEECCCC-----CCCCCCCEEEEEecCC-CeEEEEeecccccc
Confidence 356789999999999999987 999999999999998753 3679999999999876 46789999999999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
|++...+ ....+.++++++++..+++ +.++.+.+|+..++..+..+..+ .. ..++++++..+++++.++
T Consensus 72 w~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~v~~~~~ 140 (287)
T d1pgua2 72 NGITKHE-------FGSQPKVASANNDGFTAVL-TNDDDLLILQSFTGDIIKSVRLN-SP--GSAVSLSQNYVAVGLEEG 140 (287)
T ss_dssp TTEEEEE-------CSSCEEEEEECSSSEEEEE-ETTSEEEEEETTTCCEEEEEECS-SC--EEEEEECSSEEEEEETTT
T ss_pred ccccccc-------cccceeeeeeccCCceEEE-eecccceeeeccceeeeeecccc-ce--eeeeeccCcceeeecccc
Confidence 9975421 3345778899988866655 55677999999999888887643 33 346677788888888775
Q ss_pred -cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 165 -VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 165 -~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
.+++ |++..... ...+...
T Consensus 141 ~~v~~-------------~~~~~~~~--------------------~~~~~~~--------------------------- 160 (287)
T d1pgua2 141 NTIQV-------------FKLSDLEV--------------------SFDLKTP--------------------------- 160 (287)
T ss_dssp SCEEE-------------EETTEEEE--------------------EEECSSC---------------------------
T ss_pred ceeee-------------eeccccce--------------------eeeeeec---------------------------
Confidence 6889 99764433 1111100
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE-EecCCC
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS-TTEKNS 322 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~-tl~gh~ 322 (845)
+...+++++|+|++. +|++|+.||.|++||+.+++... .+.+|.
T Consensus 161 ------------------------------~~~~v~~~~~s~~~~-----~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~ 205 (287)
T d1pgua2 161 ------------------------------LRAKPSYISISPSET-----YIAAGDVMGKILLYDLQSREVKTSRWAFRT 205 (287)
T ss_dssp ------------------------------CSSCEEEEEECTTSS-----EEEEEETTSCEEEEETTTTEEEECCSCCCS
T ss_pred ------------------------------cCCceeEEEeccCcc-----ccccccccccccceeecccccccccccccc
Confidence 112344555555555 99999999999999999988765 467899
Q ss_pred CCEEEEEEeCC----------CCEEEEEeCCC-EEEEEecC-CceEEEecCCCCCeEEEEEc-CCceEEEE----EEEEe
Q psy467 323 STIRRLTFSEG----------GECLLGGDTEG-LKVYGWEP-ARQYDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWS 385 (845)
Q Consensus 323 ~~VtslafSpd----------G~~Lasgs~DG-I~IWDl~t-gk~l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~ 385 (845)
..|++++|+|+ +.+|++|+.|+ |+|||+++ .+.+..+.+|.+.|++++|+ ++++++++ |.+|.
T Consensus 206 ~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~l~s~g~D~~v~iW~ 285 (287)
T d1pgua2 206 SKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWN 285 (287)
T ss_dssp SCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred cccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCCEEEEEECCCeEEEEE
Confidence 99999999874 56899999999 99999977 56678888999999999999 77766666 99996
Q ss_pred e
Q psy467 386 H 386 (845)
Q Consensus 386 ~ 386 (845)
+
T Consensus 286 i 286 (287)
T d1pgua2 286 V 286 (287)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.94 E-value=4.7e-25 Score=231.41 Aligned_cols=239 Identities=16% Similarity=0.195 Sum_probs=191.1
Q ss_pred CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc-CCCCCeEEEEEccCCCEEEEEECCCeEEE
Q psy467 48 SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLDSFIKL 126 (845)
Q Consensus 48 ~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~-~h~~~V~~lafspdg~~Lasgs~DG~I~I 126 (845)
|+..+.+.||...|++++|+|++++|++|+.||+|++||+++++.+..+. .|...|++++|+|+++ +++++.|+.+++
T Consensus 2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~ 80 (299)
T d1nr0a2 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKV 80 (299)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEEE
T ss_pred CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce-eecccceeeEEE
Confidence 56788999999999999999999999999999999999999999888874 6889999999999987 556778999999
Q ss_pred EECCCCce---EEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceee
Q psy467 127 WDLRRKGC---IYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 127 WDl~t~~~---l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~ 203 (845)
|+...... ......+...+.+++|+++++++++++ ++.+.+ |+......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~-------------~~~~~~~~-------------- 132 (299)
T d1nr0a2 81 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAI-------------YSHGKLTE-------------- 132 (299)
T ss_dssp ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEE-------------EETTEEEE--------------
T ss_pred eccCCccccccccccccccccccccccccccccccccc-cccccc-------------cccccccc--------------
Confidence 99864321 122234667889999999999777665 467888 87432111
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
.... .. + .+++|+|++.
T Consensus 133 ---------~~~~-~~-------~---------------------------~~~~~s~~~~------------------- 149 (299)
T d1nr0a2 133 ---------VPIS-YN-------S---------------------------SCVALSNDKQ------------------- 149 (299)
T ss_dssp ---------EECS-SC-------E---------------------------EEEEECTTSC-------------------
T ss_pred ---------cccc-cc-------c---------------------------cccccccccc-------------------
Confidence 1000 01 1 4445555554
Q ss_pred cCCCCcccceEEEEEeCCCeEEEEECCCCeEEE-EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceE---EE
Q psy467 284 LPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS-TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQY---DA 358 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~-tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l---~t 358 (845)
++++|+.||.|++||+++++... ....|...|++++|+|++++|++++.|+ |++||+.++..+ ..
T Consensus 150 ----------~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~ 219 (299)
T d1nr0a2 150 ----------FVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNS 219 (299)
T ss_dssp ----------EEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCC
T ss_pred ----------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999998887654 3446889999999999999999999999 999999987655 45
Q ss_pred ecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 359 QPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 359 l~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
+.+|...|++++|+ ++++|+++ +.+|.+..
T Consensus 220 ~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~ 255 (299)
T d1nr0a2 220 WTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 255 (299)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred ccccccccccccccccccceEEEcCCCEEEEEECCC
Confidence 56789999999999 88888877 99997654
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=4.7e-24 Score=223.74 Aligned_cols=249 Identities=23% Similarity=0.397 Sum_probs=194.9
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEE------------
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES------------ 63 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~s------------ 63 (845)
++++|+ +++|.+|.+.|.+++|++ ++|++|+.|+.+++|+............+...+..
T Consensus 38 ~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~---~~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (342)
T d2ovrb2 38 TLKVWSAVTGKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS 114 (342)
T ss_dssp CEEEEETTTCCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCCCEEEEEeCC---CccccceecccccccccccccceecccccceeEeeeecccccccccc
Confidence 478887 467999999999999987 59999999999999998765544433322222211
Q ss_pred --------------------------EEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEE
Q psy467 64 --------------------------VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCS 117 (845)
Q Consensus 64 --------------------------LafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Las 117 (845)
..+......+++++.|+.|++||......+..+.+|...+.++ ++++.++++
T Consensus 115 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~l~s 192 (342)
T d2ovrb2 115 RDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL--QFDGIHVVS 192 (342)
T ss_dssp TTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEE--EECSSEEEE
T ss_pred cceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcCcccccccc--cCCCCEEEE
Confidence 1223345567888899999999999999899998887766555 456889999
Q ss_pred EECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCC
Q psy467 118 GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY 197 (845)
Q Consensus 118 gs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~ 197 (845)
++.||.|++||++.++++..+..|...+.+++++ +++|++++.||.|++ ||+...+.
T Consensus 193 ~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~s~d~~i~i-------------wd~~~~~~-------- 249 (342)
T d2ovrb2 193 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKI-------------WDIKTGQC-------- 249 (342)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEE-------------EETTTCCE--------
T ss_pred EeCCCeEEEeecccceeeeEecccccceeEEecC--CCEEEEEcCCCEEEE-------------Eecccccc--------
Confidence 9999999999999999999999999999988877 579999999999999 99987766
Q ss_pred CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccC
Q psy467 198 TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVS 277 (845)
Q Consensus 198 i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~ 277 (845)
...+..+... . ....++..++.
T Consensus 250 ------------~~~~~~~~~~-------~--------------------------~~~~~~~~~~~------------- 271 (342)
T d2ovrb2 250 ------------LQTLQGPNKH-------Q--------------------------SAVTCLQFNKN------------- 271 (342)
T ss_dssp ------------EEEECSTTSC-------S--------------------------SCEEEEEECSS-------------
T ss_pred ------------ccccccccee-------e--------------------------eceeecccCCC-------------
Confidence 4444332221 0 01122222233
Q ss_pred ceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec-----CCCCCEEEEEEeCCCCEEEEEeCCC-----EEE
Q psy467 278 RTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE-----KNSSTIRRLTFSEGGECLLGGDTEG-----LKV 347 (845)
Q Consensus 278 I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~-----gh~~~VtslafSpdG~~Lasgs~DG-----I~I 347 (845)
++++|+.||.|++||+++++++.++. +|...|++++|+|++.+||+|+.|| |++
T Consensus 272 ----------------~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~ 335 (342)
T d2ovrb2 272 ----------------FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLV 335 (342)
T ss_dssp ----------------EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEE
T ss_pred ----------------eeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEE
Confidence 89999999999999999999988774 5677899999999999999999886 899
Q ss_pred EEecC
Q psy467 348 YGWEP 352 (845)
Q Consensus 348 WDl~t 352 (845)
||++.
T Consensus 336 ~Df~~ 340 (342)
T d2ovrb2 336 LDFDV 340 (342)
T ss_dssp EECCC
T ss_pred EeCCC
Confidence 99864
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.93 E-value=1.3e-25 Score=239.92 Aligned_cols=297 Identities=8% Similarity=0.020 Sum_probs=209.7
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCC--eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDK--KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG--~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg 90 (845)
+|...|.+++|+| +|++|++++.+. .|++||..+++. ..+..|...|.+++|+|++++|++++.++.+++|++.++
T Consensus 40 ~~~~~v~~~~~sp-Dg~~l~~~~~~~g~~v~v~d~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 117 (360)
T d1k32a3 40 PEPLRIRYVRRGG-DTKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 117 (360)
T ss_dssp SCCSCEEEEEECS-SSEEEEEEEETTEEEEEEEETTTCCE-EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred cCCCCEEEEEECC-CCCEEEEEEcCCCCEEEEEECCCCcE-EEeeCCCceEEeeeecccccccceecccccccccccccc
Confidence 7999999999999 999888776553 799999987664 467789999999999999999999999999999999999
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEE----------CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGS----------LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs----------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
+....+..|...+.+++|+|+|++|+.++ .++.+++||+.+++.. .+..+...+.+++|+|||++|+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~ 196 (360)
T d1k32a3 118 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF-AATTENSHDYAPAFDADSKNLYYL 196 (360)
T ss_dssp CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE-ECSCSSSBEEEEEECTTSCEEEEE
T ss_pred ceeeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCcee-eecccccccccccccCCCCEEEEE
Confidence 99999998999999999999999998654 3456999999877654 444577788999999999999999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCC---------CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT---------PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~---------~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
+.++.+.+ ||......... ........+.+++++..+.........
T Consensus 197 s~~~~~~~-------------~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~------------ 251 (360)
T d1k32a3 197 SYRSLDPS-------------PDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLND------------ 251 (360)
T ss_dssp ESCCCCCE-------------ECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTT------------
T ss_pred eCCCceEc-------------ccccccceeeccccceEEEecccCccccceECCCcCcccccceeecc------------
Confidence 99999999 77654432110 011222233333333322111000000
Q ss_pred ccccccccccchhhhhh-ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 232 ENAESEDQAGEEELFAT-IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~-~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
....++.. ........+...++ .+..+.+...+.... ++++++.++.|++||+.
T Consensus 252 ---------~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~d~~ 306 (360)
T d1k32a3 252 ---------MYKRSSPINVDPGDYRMIIPLES--------------SILIYSVPVHGEFAA--YYQGAPEKGVLLKYDVK 306 (360)
T ss_dssp ---------GGGGCEECSCCCBCEEEEEECSS--------------EEEEEECCCCCSHHH--HHHCCCCCEEEEEEETT
T ss_pred ---------cccceeecccCcCceeEeeecCC--------------CceEEEEEecCCCee--EEEecCCCCEEEEEECC
Confidence 00000000 00000012222221 223334443332111 57788889999999999
Q ss_pred CCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCe
Q psy467 311 KFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKV 366 (845)
Q Consensus 311 s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~V 366 (845)
+++.. . |.+.|.+++|||||++|++++.|| |++||++.++...++..+..++
T Consensus 307 ~~~~~-~---~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~~ 359 (360)
T d1k32a3 307 TRKVT-E---VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL 359 (360)
T ss_dssp TCCEE-E---EEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSCE
T ss_pred CCeEE-E---ecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEeccccc
Confidence 87653 2 334599999999999999999999 9999999998888777665543
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=9.2e-24 Score=222.72 Aligned_cols=258 Identities=16% Similarity=0.274 Sum_probs=195.1
Q ss_pred EEEecCCCCCe-EEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEEC
Q psy467 51 IMSLSGHSTPV-ESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 51 i~~l~~h~~~V-~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl 129 (845)
..++++|...| +|++| ++++||+|+.||+|+|||+.+++++.++.+|.+.|.+++|+|+ .+|++|+.||.|++|++
T Consensus 5 ~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~ 81 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDI 81 (355)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEET
T ss_pred cEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEecccccccccc
Confidence 45689998876 56655 5789999999999999999999999999999999999999985 58999999999999999
Q ss_pred CCCceEEEEcCCCC--CeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcce-eecCC
Q psy467 130 RRKGCIYTYRGHSK--SINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSV-PFSHN 206 (845)
Q Consensus 130 ~t~~~l~~~~~h~~--~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~sv-s~spd 206 (845)
.............. ......+++++.++++++.|+.|++ ||+.+............... ...+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i-------------w~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (355)
T d1nexb2 82 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV-------------WKLPKESSVPDHGEEHDYPLVFHTPE 148 (355)
T ss_dssp TTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEE-------------EECCC-----------CCCEEESCTT
T ss_pred cccccccccccccccccccccccccccceeeeecCCCcEEE-------------EEccCCceeccccccceeccceeccc
Confidence 98888776654433 3455677889999999999999999 99987765221110000000 00000
Q ss_pred CCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 207 TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 207 g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
. .. ..+..... .......+.++
T Consensus 149 ~----------~~-----------------------------------~~~~~~~~-------------~~~~v~~~~~~ 170 (355)
T d1nexb2 149 E----------NP-----------------------------------YFVGVLRG-------------HMASVRTVSGH 170 (355)
T ss_dssp T----------CT-----------------------------------TEEEEEEC-------------CSSCEEEEEEE
T ss_pred c----------cc-----------------------------------ceeeeeee-------------ccccccccccc
Confidence 0 00 00000000 00112233444
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCC
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGK 365 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~ 365 (845)
++ +++++..|+.|++||+.+++.+....++...+.++.|++++.++++++.|+ |++||+.++..+..+.+|...
T Consensus 171 ~~-----~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~ 245 (355)
T d1nexb2 171 GN-----IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 245 (355)
T ss_dssp TT-----EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred cc-----eeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccccccccccccccc
Confidence 44 899999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred eEEEEEcCCceEEEE-----EEEEeeCC
Q psy467 366 VQDLAVTGTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 366 VtsVafSdg~lLaaS-----VsiW~~d~ 388 (845)
|++++|++. +|+++ |.+|....
T Consensus 246 v~~~~~~~~-~l~~~~~dg~i~iwd~~~ 272 (355)
T d1nexb2 246 VGLLRLSDK-FLVSAAADGSIRGWDAND 272 (355)
T ss_dssp CCEEEECSS-EEEEECTTSEEEEEETTT
T ss_pred ccccccccc-eeeeeecccccccccccc
Confidence 999999754 45554 99997653
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=1.4e-23 Score=219.10 Aligned_cols=250 Identities=12% Similarity=0.168 Sum_probs=195.0
Q ss_pred cceeeeeE-EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 2 RAKVEKAE-DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 2 ~irlw~l~-~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
++++|++. ...+|...|.++++++ + ..+++++.|++|++|++... .....+.++++++++..++++ .++
T Consensus 32 ~v~~Wd~~~~~~~h~~~V~~~~~~~-~-~~~~s~s~D~~v~~w~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~ 101 (287)
T d1pgua2 32 RIMEWSSSSMHQDHSNLIVSLDNSK-A-QEYSSISWDDTLKVNGITKH-------EFGSQPKVASANNDGFTAVLT-NDD 101 (287)
T ss_dssp CEEETTTTEEECCCCSCEEEEECCS-T-TCCEEEETTTEEEETTEEEE-------ECSSCEEEEEECSSSEEEEEE-TTS
T ss_pred eEEEEECCCCCCCCCCCEEEEEecC-C-CeEEEEeecccccccccccc-------ccccceeeeeeccCCceEEEe-ecc
Confidence 46788865 4678999999999986 4 56889999999999986432 134568889999888776665 677
Q ss_pred cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC-eEEEEECCCCceEEEEc-CCCCCeEEEEEecCCCEEE
Q psy467 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS-FIKLWDLRRKGCIYTYR-GHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG-~I~IWDl~t~~~l~~~~-~h~~~V~sLafSPdg~~La 158 (845)
.+.+|+..+++.+..+..+ .. ..++++++..+++++.++ .|++|++........+. .+...+.+++|+|++.+|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 178 (287)
T d1pgua2 102 DLLILQSFTGDIIKSVRLN-SP--GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA 178 (287)
T ss_dssp EEEEEETTTCCEEEEEECS-SC--EEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEE
T ss_pred cceeeeccceeeeeecccc-ce--eeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccc
Confidence 8999999999988888743 33 346677888888888775 79999998766665554 3677899999999999999
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+|+.||.|++ ||+.++... ...+.+|... |
T Consensus 179 ~g~~dg~i~i-------------~d~~~~~~~-------------------~~~~~~h~~~-------v----------- 208 (287)
T d1pgua2 179 AGDVMGKILL-------------YDLQSREVK-------------------TSRWAFRTSK-------I----------- 208 (287)
T ss_dssp EEETTSCEEE-------------EETTTTEEE-------------------ECCSCCCSSC-------E-----------
T ss_pred cccccccccc-------------eeecccccc-------------------cccccccccc-------c-----------
Confidence 9999999999 999877651 1113345554 5
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-CeEEEE
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-FSLVST 317 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~~~l~t 317 (845)
.+++|+|.+. ....+.+++. ++++|+.|+.|++||+++ .+.+..
T Consensus 209 ----------------~~~~~~p~~~--------------~~~~~~~~~~-----~l~sgs~D~~i~iw~~~~~~~~~~~ 253 (287)
T d1pgua2 209 ----------------NAISWKPAEK--------------GANEEEIEED-----LVATGSLDTNIFIYSVKRPMKIIKA 253 (287)
T ss_dssp ----------------EEEEECCCC--------------------CCSCC-----EEEEEETTSCEEEEESSCTTCCEEE
T ss_pred ----------------ceeeeccccc--------------ccccccCCCC-----eeEeecCCCeEEEEECCCCCeEEEE
Confidence 7778887765 3344556666 899999999999999976 567888
Q ss_pred ecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 318 TEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 318 l~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
+.+|...|++++|+|++ .|++++.|+ |++|++
T Consensus 254 ~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 254 LNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp TTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred eCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence 88999999999999987 588899999 999996
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=6.5e-22 Score=202.46 Aligned_cols=239 Identities=23% Similarity=0.421 Sum_probs=195.9
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
++++|+ +++|.+|.+.|++++| ++++|++|+.|+.|++|++..+........+..... .+.+....+++
T Consensus 36 ~i~vWd~~~~~~~~~l~~H~~~V~~v~~---~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 110 (293)
T d1p22a2 36 TIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL--HLRFNNGMMVT 110 (293)
T ss_dssp CEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE--EEECCTTEEEE
T ss_pred eEEEEECCCCcEEEEEecCCCCEeeeec---ccceeecccccccccccccccccccccccccccccc--cccccccceee
Confidence 478887 4678999999999988 568999999999999999999888877765554443 45556678999
Q ss_pred EECCCcEEEEECCCCc---EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 76 GCQSGSIKIWNLAVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~---~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
+..++.+.+|+..+.. ....+..|...+.++.+. ...+++++.|+.|++||+++++.+..+.++...+..+.++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~- 187 (293)
T d1p22a2 111 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR- 187 (293)
T ss_dssp EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE-
T ss_pred cccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCCCcEEEEEcccccccccccCC-
Confidence 9999999999998754 345566788888887776 4578899999999999999999999999998888888776
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
+.++++++.||.|++ ||+++... +....++... +
T Consensus 188 -~~~l~~~~~dg~i~i-------------~d~~~~~~--------------------~~~~~~~~~~-------v----- 221 (293)
T d1p22a2 188 -DRLVVSGSSDNTIRL-------------WDIECGAC--------------------LRVLEGHEEL-------V----- 221 (293)
T ss_dssp -TTEEEEEETTSCEEE-------------EETTTCCE--------------------EEEECCCSSC-------E-----
T ss_pred -CCeEEEecCCCEEEE-------------Eeccccee--------------------eeeeccccee-------e-----
Confidence 678999999999999 99988776 5555444433 2
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK- 311 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s- 311 (845)
..+.+++. +|++|+.||.|++||+..
T Consensus 222 ------------------------~~~~~~~~-----------------------------~l~sg~~dg~i~iwd~~~~ 248 (293)
T d1p22a2 222 ------------------------RCIRFDNK-----------------------------RIVSGAYDGKIKVWDLVAA 248 (293)
T ss_dssp ------------------------EEEECCSS-----------------------------EEEEEETTSCEEEEEHHHH
T ss_pred ------------------------eeccccce-----------------------------EEEEEcCCCEEEEEECCCC
Confidence 23444555 899999999999999642
Q ss_pred --------CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 312 --------FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 312 --------~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
..++..+.+|.+.|++++| ++.+|++|+.|+ |+|||
T Consensus 249 ~~~~~~~~~~~~~~~~~H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 249 LDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp TSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred ccccccCCceeeEEecCCCCCEEEEEE--cCCEEEEEecCCEEEEeC
Confidence 4578899999999999999 467899999999 99997
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.91 E-value=4.4e-23 Score=219.93 Aligned_cols=323 Identities=11% Similarity=0.063 Sum_probs=222.1
Q ss_pred EEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC--cEEEEECCCCcEEEEE
Q psy467 19 NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG--SIKIWNLAVPTVQRTL 96 (845)
Q Consensus 19 ~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG--tV~VWDl~tg~~v~~l 96 (845)
.+-.|||.+|+++|+++ +|.|++|++.++..++ + +|...|.+++|+|||++|++++.+. .|++||+++++.. .+
T Consensus 6 ~~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~-~~ 81 (360)
T d1k32a3 6 FAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KF 81 (360)
T ss_dssp GEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-EC
T ss_pred hcccccCCCCCEEEEEE-CCeEEEEECCCCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-Ee
Confidence 35679997899999987 4799999998877665 3 5999999999999999998876553 7999999987654 56
Q ss_pred cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCC
Q psy467 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN 176 (845)
Q Consensus 97 ~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~ 176 (845)
..|...|.+++|+|++++|++++.++.+++|++.+++....+..+...+.+++|+|||++|+.++.++.... .....
T Consensus 82 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~---~~~~~ 158 (360)
T d1k32a3 82 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGET---DGYVM 158 (360)
T ss_dssp CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTT---CSCCE
T ss_pred eCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccce---eeccc
Confidence 679999999999999999999999999999999999999999989999999999999999987654332111 11222
Q ss_pred ceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCce
Q psy467 177 TSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDY 255 (845)
Q Consensus 177 ~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 255 (845)
..+++||+.+++...... ......+.|+|+|+.+......... .++........ ........
T Consensus 159 ~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~------~~~d~~~~~~~-----------~~~~~~~~ 221 (360)
T d1k32a3 159 QAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLD------PSPDRVVLNFS-----------FEVVSKPF 221 (360)
T ss_dssp EEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCC------CEECSSSSCEE-----------CCSCBEEE
T ss_pred cceeeeccccCceeeecccccccccccccCCCCEEEEEeCCCce------Eccccccccee-----------eccccceE
Confidence 334559999877644333 4556678899999988764322111 02111000000 00000001
Q ss_pred eEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC-----eEEEEECCCCeEEEEecCCCCCEEEEEE
Q psy467 256 SAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR-----TVNFWDLEKFSLVSTTEKNSSTIRRLTF 330 (845)
Q Consensus 256 ~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG-----~I~IWDl~s~~~l~tl~gh~~~Vtslaf 330 (845)
.+.++. ..+..++|++++. .++++..+. .+..++...+.. ..+..+.+.+..+.+
T Consensus 222 ~~~~~~--------------~~~~~~~~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 281 (360)
T d1k32a3 222 VIPLIP--------------GSPNPTKLVPRSM-----TSEAGEYDLNDMYKRSSPINVDPGDY-RMIIPLESSILIYSV 281 (360)
T ss_dssp EEESST--------------TCCCGGGCCCGGG-----SCCCCCCCCTTGGGGCEECSCCCBCE-EEEEECSSEEEEEEC
T ss_pred EEeccc--------------CccccceECCCcC-----cccccceeecccccceeecccCcCce-eEeeecCCCceEEEE
Confidence 122222 2345667788877 444443332 244444454443 334444555666666
Q ss_pred eCCC---CEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 331 SEGG---ECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 331 SpdG---~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
...+ .++++++.++ |++||+.+++.. .|.+.|.+++|| ||+.|+++ |.+|..+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~ 346 (360)
T d1k32a3 282 PVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 346 (360)
T ss_dssp CCCCSHHHHHHCCCCCEEEEEEETTTCCEE----EEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred EecCCCeeEEEecCCCCEEEEEECCCCeEE----EecCCcCEEEECCCCCEEEEEECCCeEEEEECCCC
Confidence 5544 4677888888 999999987643 244569999999 99999887 999977543
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=1.9e-23 Score=230.09 Aligned_cols=230 Identities=20% Similarity=0.255 Sum_probs=172.0
Q ss_pred CCEEEEEeCCCeEEEEECCCCee---E--EEe-----cCCCCCeEEEEEcCC-----CCEEEEEECCCcEEEEECCCCc-
Q psy467 28 GQVLATGGDDKKVNLWALGKSNC---I--MSL-----SGHSTPVESVQFGNG-----EETLSAGCQSGSIKIWNLAVPT- 91 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~---i--~~l-----~~h~~~V~sLafSpd-----g~~LaSgs~DGtV~VWDl~tg~- 91 (845)
+.++++++.||.|++|++..... . ... ..+...+..++|.++ +.++++++.||++.+|++....
T Consensus 79 ~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~ 158 (393)
T d1sq9a_ 79 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD 158 (393)
T ss_dssp EEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred CcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCc
Confidence 45788999999999998743321 1 111 124567888888875 4678999999999999974211
Q ss_pred --------------EEEE---EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE------cCCCCCeEEE
Q psy467 92 --------------VQRT---LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY------RGHSKSINSI 148 (845)
Q Consensus 92 --------------~v~~---l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~------~~h~~~V~sL 148 (845)
.... ...+...+.+++|+|++ +|++|+.||+|++||+.+++++..+ .+|...|.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l 237 (393)
T d1sq9a_ 159 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 237 (393)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred ccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEc
Confidence 1111 12355668999999998 8999999999999999999887655 4588899999
Q ss_pred EEecCCCEEEEEeCCCc---EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 149 RFSPDGQWIASGGEDGV---VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 149 afSPdg~~Lasgs~DG~---I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+|+|||++|++|+.|+. |++ ||+.+++. +..+......
T Consensus 238 ~~spdg~~l~sgs~D~t~~~i~l-------------wd~~~g~~--------------------~~~l~~~~~~------ 278 (393)
T d1sq9a_ 238 KFSPQGSLLAIAHDSNSFGCITL-------------YETEFGER--------------------IGSLSVPTHS------ 278 (393)
T ss_dssp EECSSTTEEEEEEEETTEEEEEE-------------EETTTCCE--------------------EEEECBC---------
T ss_pred ccccccceeeeecCCCCcceeee-------------ccccccee--------------------eeeecccccc------
Confidence 99999999999999986 566 99998887 4444322211
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
. .. ......|...|++++|+||++ +|++|+.|++|+
T Consensus 279 -~----------------------------~~----------~~~~~gH~~~V~~l~fspd~~-----~l~S~s~D~~v~ 314 (393)
T d1sq9a_ 279 -S----------------------------QA----------SLGEFAHSSWVMSLSFNDSGE-----TLCSAGWDGKLR 314 (393)
T ss_dssp --------------------------------------------CCBSBSSCEEEEEECSSSS-----EEEEEETTSEEE
T ss_pred -c----------------------------cc----------eeeeecccCceeeeccCCCCC-----eeEEECCCCEEE
Confidence 0 00 001123456688888888888 999999999999
Q ss_pred EEECCCCeEEEEecCCCCCEE----EEEEeCCCCEEEEEe
Q psy467 306 FWDLEKFSLVSTTEKNSSTIR----RLTFSEGGECLLGGD 341 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~~~Vt----slafSpdG~~Lasgs 341 (845)
+||+.+++++.++.+|...|. .++|+++|..+++++
T Consensus 315 vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~ 354 (393)
T d1sq9a_ 315 FWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 354 (393)
T ss_dssp EEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred EEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcc
Confidence 999999999999999987775 588999998876554
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.89 E-value=5.6e-22 Score=221.34 Aligned_cols=311 Identities=8% Similarity=0.007 Sum_probs=200.8
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE--EEc---CCCCCeE
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR--TLN---GHKSSIT 104 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~--~l~---~h~~~V~ 104 (845)
++++++.||+|+|||+.+++.+.++..|. .+..++|||||++|++++.|++|++||+.+++... .+. +|...+.
T Consensus 34 ~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~ 112 (426)
T d1hzua2 34 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVES 112 (426)
T ss_dssp EEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEE
Confidence 45677889999999999999999999774 59999999999999999999999999999887443 332 3445566
Q ss_pred EEEEccCCCEEEE-EECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCE-EEEEeCCCcEEEeeeeccCCceeEEE
Q psy467 105 SVDFHPYGDYLCS-GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW-IASGGEDGVVRIGASFHLTNTSIHVV 182 (845)
Q Consensus 105 ~lafspdg~~Las-gs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~-Lasgs~DG~I~I~~~~~~~~~~I~vW 182 (845)
+++|+|||+++++ +..++.+.+||..++.++..+..+...+..+++.+++.. .++.+.|+...++. ....+.+.++
T Consensus 113 s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~--~~~~~~i~~~ 190 (426)
T d1hzua2 113 SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN--VKETGKVLLV 190 (426)
T ss_dssp CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE--ETTTTEEEEE
T ss_pred eeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEe--cCCCCeEEEE
Confidence 7778899998755 458899999999999988888766655555555555543 23344444433311 1112233335
Q ss_pred ECCCCccCCC---CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEE
Q psy467 183 DLSLVHPLGT---PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIF 259 (845)
Q Consensus 183 Dl~tg~~l~~---~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~f 259 (845)
+......+.. ........+.++|+++++......... +.+...... ..+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~-----~~~~~~~~~---------------------~~~~~ 244 (426)
T d1hzua2 191 NYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNK-----VAVIDSKDR---------------------RLSAL 244 (426)
T ss_dssp ECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSE-----EEEEETTTT---------------------EEEEE
T ss_pred EeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccc-----eeeeecccc---------------------cEEEE
Confidence 5544433211 124556678889988877664433222 111111100 11111
Q ss_pred cCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-------CeEEEEecCCCCCEEEEEEeC
Q psy467 260 QPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-------FSLVSTTEKNSSTIRRLTFSE 332 (845)
Q Consensus 260 spdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-------~~~l~tl~gh~~~VtslafSp 332 (845)
.+.+. .........+..++... ...+..+.|+.+.+|+... ++...++.+|...+..++|+|
T Consensus 245 ~~~~~---------~~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sP 313 (426)
T d1hzua2 245 VDVGK---------TPHPGRGANFVHPKYGP--VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHP 313 (426)
T ss_dssp EECSS---------CCCCSCCEEEEETTTEE--EEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCT
T ss_pred eccCC---------cccccceeeeecCCCCc--eEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCC
Confidence 11111 00111122222222100 0223334567777777543 578889999999999999999
Q ss_pred CCCEEEE-------EeCCC-EEEEEecCCceEEEe---------cCCCCCeEEEEEc-CCceEEEE
Q psy467 333 GGECLLG-------GDTEG-LKVYGWEPARQYDAQ---------PMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 333 dG~~Las-------gs~DG-I~IWDl~tgk~l~tl---------~~h~~~VtsVafS-dg~lLaaS 380 (845)
||++|++ +..++ |+|||+.+++...++ ..|...|.+++|| ||+.++++
T Consensus 314 dg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs 379 (426)
T d1hzua2 314 KSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS 379 (426)
T ss_dssp TCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEE
T ss_pred CCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEE
Confidence 9999995 34466 999999998766544 2456679999999 99977654
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.88 E-value=2.3e-20 Score=193.73 Aligned_cols=271 Identities=11% Similarity=0.110 Sum_probs=199.8
Q ss_pred EEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEc
Q psy467 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFH 109 (845)
Q Consensus 31 LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafs 109 (845)
.++++.|++|.+||+.+++.+.++.. ...+..++|+|||++|+ +++.++.|.+||+.+++.+..+..+. .+..++|+
T Consensus 5 yV~~~~~~~v~v~D~~t~~~~~~i~~-g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~ 82 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVS 82 (301)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCeEEEEEEC-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-cccccccc
Confidence 34567889999999999999998874 45678999999999875 56678999999999999999998665 46899999
Q ss_pred cCCCEEEE-EECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE-eCCCcEEEeeeeccCCceeEEEECCCC
Q psy467 110 PYGDYLCS-GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG-GEDGVVRIGASFHLTNTSIHVVDLSLV 187 (845)
Q Consensus 110 pdg~~Las-gs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg-s~DG~I~I~~~~~~~~~~I~vWDl~tg 187 (845)
+++..+++ +..++.+.+|+..+++....+.. ...+.+++|+|+++.++.+ ..++.+.+ |+..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~-------------~~~~~~ 148 (301)
T d1l0qa2 83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSV-------------INTVTK 148 (301)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEE-------------EETTTT
T ss_pred cccccccccccccceeeecccccceeeeeccc-cccceEEEeecCCCeeeeeeccccceee-------------eecccc
Confidence 99986655 55677899999999988888874 4567899999999987654 45777888 998887
Q ss_pred ccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcC
Q psy467 188 HPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN 266 (845)
Q Consensus 188 ~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~ 266 (845)
....... ......+.+++++..+......... + ..+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----------------------------~~~~~~~~-- 190 (301)
T d1l0qa2 149 AVINTVSVGRSPKGIAVTPDGTKVYVANFDSMS-------I-----------------------------SVIDTVTN-- 190 (301)
T ss_dssp EEEEEEECCSSEEEEEECTTSSEEEEEETTTTE-------E-----------------------------EEEETTTT--
T ss_pred ceeeecccCCCceEEEeeccccceeeecccccc-------c-----------------------------ccccccce--
Confidence 7654432 3445677788887766554332211 1 00111100
Q ss_pred CCCcccccccCceeEEEcCCCCcccceEEEEEe---CCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEE-EEeC
Q psy467 267 RSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS---ADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDT 342 (845)
Q Consensus 267 ~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs---~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~La-sgs~ 342 (845)
..............++|++++. .+++++ .++.|++||+.+++.+..+..+ ..+.+++|+|||++|+ +++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~g~-----~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~ 264 (301)
T d1l0qa2 191 SVIDTVKVEAAPSGIAVNPEGT-----KAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSF 264 (301)
T ss_dssp EEEEEEECSSEEEEEEECTTSS-----EEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETT
T ss_pred eeeecccccCCcceeecccccc-----ccccccccceeeeeeeeecCCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECC
Confidence 0000111223456788888888 444433 3478999999999999888754 5689999999999875 6666
Q ss_pred CC-EEEEEecCCceEEEecC
Q psy467 343 EG-LKVYGWEPARQYDAQPM 361 (845)
Q Consensus 343 DG-I~IWDl~tgk~l~tl~~ 361 (845)
++ |++||+++++.+.++..
T Consensus 265 ~~~i~v~D~~t~~~~~~~~v 284 (301)
T d1l0qa2 265 CNTVSVIDTATNTITATMAV 284 (301)
T ss_dssp TTEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEECCCCeEEEEEeC
Confidence 78 99999999999988864
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.88 E-value=7.1e-21 Score=200.32 Aligned_cols=294 Identities=12% Similarity=0.066 Sum_probs=199.3
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecC--CCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEEEEcCCCC----
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSG--HSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQRTLNGHKS---- 101 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~--h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~~l~~h~~---- 101 (845)
+++++++.|++|.|||+.+++.+..+.. +...+.+++|+|||++++ +++.++.|.+||+.+++.+..+..+..
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~ 81 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence 5899999999999999999999998864 345678999999999874 566789999999999999988865543
Q ss_pred -CeEEEEEccCCCEEEEEE------------CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 102 -SITSVDFHPYGDYLCSGS------------LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 102 -~V~~lafspdg~~Lasgs------------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.+..++|+|+++++++++ .++.+.+||..++..+..+.. ...+.+++|+|||+++++++.+ +.+
T Consensus 82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~--~~~ 158 (337)
T d1pbyb_ 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLGRD--LHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEESSS--EEE
T ss_pred cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc-cCCceEEEEcCCCCEEEEEcCC--cce
Confidence 345789999999998775 457899999999998888874 4568899999999999988654 677
Q ss_pred eeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc--cccccccchhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA--ESEDQAGEEEL 245 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~--~~~~~~~~~~l 245 (845)
||..+++...... ........+.+++..+.....+... ............. ...........
T Consensus 159 -------------~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (337)
T d1pbyb_ 159 -------------MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGV--MATPFYTARKDIDPADPTAYRTGLLT 223 (337)
T ss_dssp -------------EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTE--EEEEEEEEBTTSCTTSGGGEEEEEEE
T ss_pred -------------eeeecCcEEEEeecCCccccceecCCcceeeccccccce--eeeeeeeeeeccceeeecccCccEEE
Confidence 8888776543322 1222233333433322111000000 0000000000000 00000000000
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCE
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTI 325 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~V 325 (845)
+.. .........+.+ ....+..++++|++. +++++ ++.|++||+.+++.+..+. +...+
T Consensus 224 ~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~-----~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~ 282 (337)
T d1pbyb_ 224 MDL-ETGEMAMREVRI------------MDVFYFSTAVNPAKT-----RAFGA--YNVLESFDLEKNASIKRVP-LPHSY 282 (337)
T ss_dssp EET-TTCCEEEEEEEE------------CSSCEEEEEECTTSS-----EEEEE--ESEEEEEETTTTEEEEEEE-CSSCC
T ss_pred EEc-CCCcEEEEEecC------------CCcceEEEEecccce-----EEEEc--cccEEEEECCCCcEEEEEc-CCCCE
Confidence 000 000001122222 234567788899988 66554 5899999999999998886 45678
Q ss_pred EEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC
Q psy467 326 RRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM 361 (845)
Q Consensus 326 tslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~ 361 (845)
.+++|+|||++|++++.++ |+|||.++++.+.++..
T Consensus 283 ~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~ 319 (337)
T d1pbyb_ 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp CEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEEC
Confidence 9999999999999999999 99999999999988764
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=6e-21 Score=198.92 Aligned_cols=281 Identities=13% Similarity=0.079 Sum_probs=197.9
Q ss_pred cceeeee---------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCC-CeEEEEEcCCCC
Q psy467 2 RAKVEKA---------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST-PVESVQFGNGEE 71 (845)
Q Consensus 2 ~irlw~l---------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~-~V~sLafSpdg~ 71 (845)
++++|++ ....+|.+.|.+++|+|+++.+|++|+.||.|++|+............+.. ......+.++..
T Consensus 34 ~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (342)
T d1yfqa_ 34 SLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDD 113 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTT
T ss_pred eEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccccccccccccccccccccccccc
Confidence 4788875 334479999999999995677999999999999999988877776655544 445556677889
Q ss_pred EEEEEECCCcEEEEECCCCcE----EEEEcCC--CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE---EEEcCCC
Q psy467 72 TLSAGCQSGSIKIWNLAVPTV----QRTLNGH--KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI---YTYRGHS 142 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~----v~~l~~h--~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l---~~~~~h~ 142 (845)
.+++++.++.+++||++++.. ......+ ......+.+.+++..+++++.|+.|++||+...... .......
T Consensus 114 ~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 193 (342)
T d1yfqa_ 114 KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193 (342)
T ss_dssp EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCS
T ss_pred cccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccc
Confidence 999999999999999865432 2222222 234556778888999999999999999999765532 2233445
Q ss_pred CCeEEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCc
Q psy467 143 KSINSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGT 221 (845)
Q Consensus 143 ~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~ 221 (845)
..+.+..+.+ ++..+++++.||.+.+ |+............ ...+..+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~s~dg~~~v-------------~~~~~~~~~~~~~~--------------~~~~~~~~~--- 243 (342)
T d1yfqa_ 194 YQIRDVALLPKEQEGYACSSIDGRVAV-------------EFFDDQGDDYNSSK--------------RFAFRCHRL--- 243 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEETTSEEEE-------------EECCTTCCSTTCTT--------------CEEEECCCC---
T ss_pred cceeeeEeecCCCCEEEeecCCCeEEE-------------EEecCCcceeeccc--------------cceeeeeee---
Confidence 5566666655 6788999999999999 88765444111000 000000000
Q ss_pred cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 222 KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 222 ~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
......+...+++++|+|+++ +|++|+.|
T Consensus 244 ----------------------------------------------~~~~~~~~~~v~~l~~sp~~~-----~lasg~~D 272 (342)
T d1yfqa_ 244 ----------------------------------------------NLKDTNLAYPVNSIEFSPRHK-----FLYTAGSD 272 (342)
T ss_dssp ----------------------------------------------CTTCCSSCCCEEEEEECTTTC-----CEEEEETT
T ss_pred ----------------------------------------------ccCCCcccccceeEEecCCcc-----EEEEECCC
Confidence 001112334567788888887 89999999
Q ss_pred CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEE
Q psy467 302 RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQD 368 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~Vts 368 (845)
|.|++||+.+++++.++..+ ..+..++|+|+|++|++|+.|. +++|.... ..+..|...|..
T Consensus 273 g~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~~~~----~~~~~~~~~i~~ 335 (342)
T d1yfqa_ 273 GIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAID----QTIELNASSIYI 335 (342)
T ss_dssp SCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCSSSC----TTSCCCCCEEEE
T ss_pred CEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEEEEEEcCCcEEEeeeeC----CCccCCCCeEEE
Confidence 99999999999999888753 3566788999999999998888 77775432 234445555543
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.86 E-value=1.4e-20 Score=198.74 Aligned_cols=310 Identities=11% Similarity=0.044 Sum_probs=202.0
Q ss_pred EEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-CCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEEEEcC
Q psy467 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 21 LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~~l~~ 98 (845)
++|++ ++++|++++.+++|.+||+.+++.+.++. .|...+.+++|+|||++++ +++.++.|.+||+.+++.+..+..
T Consensus 2 ~a~~~-~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~ 80 (346)
T d1jmxb_ 2 PALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 80 (346)
T ss_dssp CCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred ccCCC-CCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecc
Confidence 46888 99999999999999999999999999886 4566789999999999875 555789999999999998887753
Q ss_pred CC------CCeEEEEEccCCCEEEEEE------------CCCeEEEEECCCCceEEEEcC--CCCCeEEEEEecCCCEEE
Q psy467 99 HK------SSITSVDFHPYGDYLCSGS------------LDSFIKLWDLRRKGCIYTYRG--HSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 99 h~------~~V~~lafspdg~~Lasgs------------~DG~I~IWDl~t~~~l~~~~~--h~~~V~sLafSPdg~~La 158 (845)
.. ..+..++|+|||+++++++ .++.+.+||..+++....+.. ....+..+.+++++.+++
T Consensus 81 ~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
T d1jmxb_ 81 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYV 160 (346)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEE
T ss_pred cccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEE
Confidence 32 2356789999999988765 467788898877654433221 223455566666666554
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
++ +.+.+ |++.+++.+.... ......+.++|++..+......... +.+........
T Consensus 161 ~~---~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-- 217 (346)
T d1jmxb_ 161 AG---PDIYK-------------MDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHE-----FSMLYTIARFK-- 217 (346)
T ss_dssp ES---SSEEE-------------ECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCE-----EEEEEEEEEC---
T ss_pred eC---CcceE-------------EEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCc-----eEeeeeeeeec--
Confidence 32 34666 8888877654433 3455667777777654322211111 00100000000
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t 317 (845)
.....+... ........+..................+..+.+++++. .++.+. ++.|.+||..+++.+..
T Consensus 218 --~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~v~v~d~~~~~~~~~ 287 (346)
T d1jmxb_ 218 --DDKQDPATA--DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-----NQIYGV-LNRLAKYDLKQRKLIKA 287 (346)
T ss_dssp --------CCC--EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-----TEEEEE-ESEEEEEETTTTEEEEE
T ss_pred --cCceeEeec--cCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCC-----EEEEec-CCeEEEEECCCCcEEEE
Confidence 000000000 00000111111110000001112234567788888887 455554 46899999999999888
Q ss_pred ecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCC
Q psy467 318 TEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGK 365 (845)
Q Consensus 318 l~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~ 365 (845)
+. +...+.+++|||||++|++++.|+ |+|||.++++.+.++..+.+.
T Consensus 288 ~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g~ 335 (346)
T d1jmxb_ 288 AN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGD 335 (346)
T ss_dssp EE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSSC
T ss_pred Ec-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCCC
Confidence 76 345799999999999999999999 999999999999988765543
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.86 E-value=1.5e-20 Score=209.56 Aligned_cols=307 Identities=10% Similarity=0.050 Sum_probs=198.8
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE--e---cCCCCCeEEEEEcCCC
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS--L---SGHSTPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~--l---~~h~~~V~sLafSpdg 70 (845)
++++|+ +++|..|. .+..++||| ||++|++++.|++|++||+.+++.... + .+|...+.+++|+|||
T Consensus 43 ~v~vwD~~t~~~~~~l~~g~-~~~~vafSP-DGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG 120 (426)
T d1hzua2 43 QIALVDGDSKKIVKVIDTGY-AVHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYED 120 (426)
T ss_dssp EEEEEETTTCSEEEEEECCS-SEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTT
T ss_pred EEEEEECCCCcEEEEEeCCC-CeeEEEECC-CCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCC
Confidence 467776 46777774 599999999 999999999999999999988875432 2 3456667778888999
Q ss_pred CEEEEE-ECCCcEEEEECCCCcEEEEEcCCCCC-----------eEEEEEccCCCEEEEEEC-CCeEEEEECCCCce-EE
Q psy467 71 ETLSAG-CQSGSIKIWNLAVPTVQRTLNGHKSS-----------ITSVDFHPYGDYLCSGSL-DSFIKLWDLRRKGC-IY 136 (845)
Q Consensus 71 ~~LaSg-s~DGtV~VWDl~tg~~v~~l~~h~~~-----------V~~lafspdg~~Lasgs~-DG~I~IWDl~t~~~-l~ 136 (845)
++|+++ ..++.+.+||..++.+...+..|... ...+.+++++..++.... .+.+.+++...... ..
T Consensus 121 ~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~ 200 (426)
T d1hzua2 121 RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV 200 (426)
T ss_dssp TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEE
T ss_pred CEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceee
Confidence 987555 47899999999999988877655433 445566666665554443 34566666554432 22
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECCCCccCCCCC----CCCCcceeecCCCCe-E
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP----PQYTSSVPFSHNTSL-R 210 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~----~~~i~svs~spdg~~-l 210 (845)
....+...+..+.|+|++++++++.. +..+.+ ++..+++...... ........+...+.. .
T Consensus 201 ~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (426)
T d1hzua2 201 TSIGAAPFLADGGWDSSHRYFMTAANNSNKVAV-------------IDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPV 267 (426)
T ss_dssp EEEECCSSEEEEEECTTSCEEEEEETTCSEEEE-------------EETTTTEEEEEEECSSCCCCSCCEEEEETTTEEE
T ss_pred EEeccCCccEeeeECCCCcEEEeeeecccceee-------------eecccccEEEEeccCCcccccceeeeecCCCCce
Confidence 33356778899999999998887764 445666 8887776632211 111111222111111 1
Q ss_pred EEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCC-CC-cCC----CCcccccccCceeEEEc
Q psy467 211 KSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPH-RS-LNR----SGTCVPVSVSRTSLSIL 284 (845)
Q Consensus 211 ~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspd-g~-~~~----~~~~~~~~~~I~slafS 284 (845)
......... . + ..+... .. ... ......+...+..++|+
T Consensus 268 ~~~~~~~d~----~--v-----------------------------~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~s 312 (426)
T d1hzua2 268 WSTSHLGDG----S--I-----------------------------SLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTH 312 (426)
T ss_dssp EEEECTTTC----E--E-----------------------------EEEECCTTTCTTTBTSEEEEEECSSSCCCCEECC
T ss_pred EEeccCCCc----e--E-----------------------------EEeeccccccccccceEeEEEecCCCceeEEEcC
Confidence 111110000 0 0 000000 00 000 01111234568899999
Q ss_pred CCCCcccceEEEE-------EeCCCeEEEEECCCCeEEEEec---------CCCCCEEEEEEeCCCCEEEEE-----eCC
Q psy467 285 PQSPMLCFILTTS-------SSADRTVNFWDLEKFSLVSTTE---------KNSSTIRRLTFSEGGECLLGG-----DTE 343 (845)
Q Consensus 285 Pdg~~~~~~lLat-------gs~DG~I~IWDl~s~~~l~tl~---------gh~~~VtslafSpdG~~Lasg-----s~D 343 (845)
||++ +|++ ++.|++|+|||+.++++..++. .|...|.+++|||||++|+++ +.+
T Consensus 313 Pdg~-----~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~ 387 (426)
T d1hzua2 313 PKSS-----HLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDS 387 (426)
T ss_dssp TTCS-----EEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSC
T ss_pred CCCc-----eEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCC
Confidence 9999 7774 4567899999999987655442 356679999999999977543 246
Q ss_pred C-EEEEEecCCceEEEecCCC
Q psy467 344 G-LKVYGWEPARQYDAQPMGW 363 (845)
Q Consensus 344 G-I~IWDl~tgk~l~tl~~h~ 363 (845)
+ |+|||..+++....+.++.
T Consensus 388 ~~i~v~D~~T~k~~~~i~~~~ 408 (426)
T d1hzua2 388 SALVVVDDKTLKLKAVVKDPR 408 (426)
T ss_dssp CEEEEEETTTTEEEEEECCTT
T ss_pred CeEEEEECCCCeEEEEECCCC
Confidence 6 9999999999988888764
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.84 E-value=4.2e-21 Score=215.83 Aligned_cols=317 Identities=9% Similarity=-0.059 Sum_probs=209.8
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc--EEEEEc---CCCCCeE
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT--VQRTLN---GHKSSIT 104 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~--~v~~l~---~h~~~V~ 104 (845)
++++.+.+|+|.|||..+++++..+..+ ..+..++|||||++|++++.||.|.+||+.+++ .+..+. .|.+.+.
T Consensus 34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~ 112 (432)
T d1qksa2 34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIET 112 (432)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEE
Confidence 4588899999999999999999999877 469999999999999999999999999998875 334443 3444556
Q ss_pred EEEEccCCCEE-EEEECCCeEEEEECCCCceEEEEcCC-----------CCCeEEEEEecCCCEEE-EEeCCCcEEEeee
Q psy467 105 SVDFHPYGDYL-CSGSLDSFIKLWDLRRKGCIYTYRGH-----------SKSINSIRFSPDGQWIA-SGGEDGVVRIGAS 171 (845)
Q Consensus 105 ~lafspdg~~L-asgs~DG~I~IWDl~t~~~l~~~~~h-----------~~~V~sLafSPdg~~La-sgs~DG~I~I~~~ 171 (845)
+..|+|||++| ++++.++.|++||..+++++..+..+ ......+.++|+|..++ +...++.+.+
T Consensus 113 s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~--- 189 (432)
T d1qksa2 113 SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL--- 189 (432)
T ss_dssp CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE---
T ss_pred ecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEE---
Confidence 66778899986 67888999999999999988877643 34556778888887654 4556678888
Q ss_pred eccCCceeEEEECCCCccCC--CC-CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 172 FHLTNTSIHVVDLSLVHPLG--TP-PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 172 ~~~~~~~I~vWDl~tg~~l~--~~-~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||..+++... .. .......+.++|+|+++......... +.+.....................
T Consensus 190 ----------~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~-----v~v~d~~~~~~~~~~~~g~~~~~~ 254 (432)
T d1qksa2 190 ----------VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNK-----LVVIDTKEGKLVAIEDTGGQTPHP 254 (432)
T ss_dssp ----------EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTE-----EEEEETTTTEEEEEEECSSSSBCC
T ss_pred ----------EEccCCCcceEEEEcccCccccceECCCCCEEEEeccccce-----EEEeecccceEEEEeccCcccccc
Confidence 7776655322 11 23456789999999987765543332 112111111110000000000000
Q ss_pred c------cCCCceeEEEcC--CCCcC----CCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE
Q psy467 249 I------ANPCDYSAIFQP--HRSLN----RSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316 (845)
Q Consensus 249 ~------~~~~~~~l~fsp--dg~~~----~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~ 316 (845)
. ............ ++... .......+...+....++|++. .+++++.++..++|+.....
T Consensus 255 ~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~-----~~~~~s~p~~~~lw~~~~~~--- 326 (432)
T d1qksa2 255 GRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGG-----SLFIKTHPNSQYLYVDATLN--- 326 (432)
T ss_dssp TTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-----CCCEECCTTCSEEEEECTTC---
T ss_pred CcccceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCC-----eEEEEecCCccceeecccCC---
Confidence 0 000000011111 11000 0111122345677889999988 78889999999999865432
Q ss_pred EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 317 TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 317 tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.|.....++++ ||++.|++++.|+ +++|++.++.. +..|...|.+++|| ||+.+.+|
T Consensus 327 ---~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~---l~~~~~~v~~~~fS~DG~~v~~S 385 (432)
T d1qksa2 327 ---PEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAG---ITEGQPRVVQGEFNKDGTEVWFS 385 (432)
T ss_dssp ---SSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHHT---CCSSCCEEEEEEECTTSSEEEEE
T ss_pred ---CCCCeeeEEEE-EechhhcccccCCceEecccccccc---cCCCCCcEEEeEECCCCCEEEEE
Confidence 23333344554 8999999999999 99999866533 34577889999999 99988765
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.84 E-value=2.1e-20 Score=210.07 Aligned_cols=319 Identities=10% Similarity=0.024 Sum_probs=205.2
Q ss_pred ceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEe---cCCCCCeEEEEEcCCCC
Q psy467 3 AKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSL---SGHSTPVESVQFGNGEE 71 (845)
Q Consensus 3 irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l---~~h~~~V~sLafSpdg~ 71 (845)
+++|+ ++++..|. .+..++||| +|+++++++.||.|.+||+.+++. ...+ .+|...+.+..|+|||+
T Consensus 44 v~v~D~~t~~v~~~~~~g~-~~~~v~fSp-DG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~ 121 (432)
T d1qksa2 44 IALIDGSTYEIKTVLDTGY-AVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDK 121 (432)
T ss_dssp EEEEETTTCCEEEEEECSS-CEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTT
T ss_pred EEEEECCCCcEEEEEeCCC-CeeEEEECC-CCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCC
Confidence 55665 45677664 699999999 999999999999999999987653 3333 34556667777889999
Q ss_pred EE-EEEECCCcEEEEECCCCcEEEEEcCC-----------CCCeEEEEEccCCCEEE-EEECCCeEEEEECCCCceEEEE
Q psy467 72 TL-SAGCQSGSIKIWNLAVPTVQRTLNGH-----------KSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 72 ~L-aSgs~DGtV~VWDl~tg~~v~~l~~h-----------~~~V~~lafspdg~~La-sgs~DG~I~IWDl~t~~~l~~~ 138 (845)
+| ++++.+++|++||..+++++..+..+ ......+.++|++..++ +...++.|.+||..+.+.....
T Consensus 122 ~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~ 201 (432)
T d1qksa2 122 YAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT 201 (432)
T ss_dssp EEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE
T ss_pred EEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEE
Confidence 86 67778999999999999988877543 34566789999998764 5566799999999887755433
Q ss_pred c-CCCCCeEEEEEecCCCEEEEEeCC-CcEEEeeeeccCCceeEEEECCCCccCCCCC-------CCCCcceeecCCCCe
Q psy467 139 R-GHSKSINSIRFSPDGQWIASGGED-GVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-------PQYTSSVPFSHNTSL 209 (845)
Q Consensus 139 ~-~h~~~V~sLafSPdg~~Lasgs~D-G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-------~~~i~svs~spdg~~ 209 (845)
. .+...+.+++|+|||+++++++.+ +.+.+ +|..+++...... ............+..
T Consensus 202 ~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v-------------~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 268 (432)
T d1qksa2 202 EISAERFLHDGGLDGSHRYFITAANARNKLVV-------------IDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPV 268 (432)
T ss_dssp EEECCSSEEEEEECTTSCEEEEEEGGGTEEEE-------------EETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEE
T ss_pred EEcccCccccceECCCCCEEEEeccccceEEE-------------eecccceEEEEeccCccccccCcccceecCCCCce
Confidence 2 355678999999999988777754 45666 7776665532211 111122222222222
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCC------------CcccccccC
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS------------GTCVPVSVS 277 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~------------~~~~~~~~~ 277 (845)
........ ..+.++........ ..........+++++..... .....+...
T Consensus 269 ~~~~~lg~-----~~v~~~~~~~~~~~------------~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~ 331 (432)
T d1qksa2 269 WATSHMGD-----DSVALIGTDPEGHP------------DNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEI 331 (432)
T ss_dssp EEEEBSSS-----SEEEEEECCTTTCT------------TTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHH
T ss_pred ecccccCC-----ceEEeccccccccc------------ccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCe
Confidence 22111111 11111111100000 00001123334443321100 000111112
Q ss_pred ceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEe-----CCC-EEEEEec
Q psy467 278 RTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGD-----TEG-LKVYGWE 351 (845)
Q Consensus 278 I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs-----~DG-I~IWDl~ 351 (845)
...+++ ||++ .+++++.|+.+++||+.++. .+..|...|.+++|||||++|+++. .++ |+|||..
T Consensus 332 ~~sv~v-pDg~-----~la~~s~d~~~k~w~~~~~~---~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~ 402 (432)
T d1qksa2 332 SGSVAV-FDIK-----AMTGDGSDPEFKTLPIAEWA---GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDK 402 (432)
T ss_dssp HTCEEE-EEGG-----GCCCSSSCCCEEEECHHHHH---TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred eeEEEE-Eech-----hhcccccCCceEeccccccc---ccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECC
Confidence 345555 8998 79999999999999986543 2235667899999999999886654 356 9999999
Q ss_pred CCceEEEecCC
Q psy467 352 PARQYDAQPMG 362 (845)
Q Consensus 352 tgk~l~tl~~h 362 (845)
+.++...+++.
T Consensus 403 T~k~~~~i~~~ 413 (432)
T d1qksa2 403 TLELKHVIKDE 413 (432)
T ss_dssp TTEEEEEECCT
T ss_pred CceEEeEecCC
Confidence 99998887654
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.82 E-value=1.4e-17 Score=179.51 Aligned_cols=315 Identities=9% Similarity=-0.065 Sum_probs=205.6
Q ss_pred eccCCCcEEEEEEecCCCCEEEEE-----eCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE--------
Q psy467 11 FMAHGASVNCLALGKKSGQVLATG-----GDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-------- 77 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTg-----s~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-------- 77 (845)
...|.+++.+++++| +|+.+++. +..+.|.+||..+++.+.++..+..+ .++|+|||++|++++
T Consensus 16 ~~~~~~p~~~~a~sp-dg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~ 92 (373)
T d2madh_ 16 AGAADGPTNDEAPGA-DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAK 92 (373)
T ss_pred cccCCCCccccccCC-CCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccc
Confidence 346889999999999 88877764 23467999999999999998866654 799999999998875
Q ss_pred --CCCcEEEEECCCCcEEEEEcCCCCCe-------EEEEEccCCCEEEEEE--CCCeEEEEECCCCceEEEEcCCCCCeE
Q psy467 78 --QSGSIKIWNLAVPTVQRTLNGHKSSI-------TSVDFHPYGDYLCSGS--LDSFIKLWDLRRKGCIYTYRGHSKSIN 146 (845)
Q Consensus 78 --~DGtV~VWDl~tg~~v~~l~~h~~~V-------~~lafspdg~~Lasgs--~DG~I~IWDl~t~~~l~~~~~h~~~V~ 146 (845)
.++.|.+||..+++.+..+..+.... ..+.|+++++.++... .++.+.+|+....+...... ...
T Consensus 93 ~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 168 (373)
T d2madh_ 93 GKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS----SPT 168 (373)
T ss_pred cccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec----cce
Confidence 35789999999999988887655433 4578899998766554 45678999988776654443 457
Q ss_pred EEEEecCCCEE-EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC--------CCCCcceeecCCCCeEEEEecCC
Q psy467 147 SIRFSPDGQWI-ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP--------PQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 147 sLafSPdg~~L-asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~--------~~~i~svs~spdg~~l~~~~~h~ 217 (845)
++.++|+|+.+ ++.+.|+.+.+ ||...+....... ........+.+++..+.. ...
T Consensus 169 ~~~~s~~g~~~~v~~~~dg~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 233 (373)
T d2madh_ 169 CYHIHPGAPSTFYLLCAQGGLAK-------------TDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP--VYS 233 (373)
T ss_pred eEEEecCCCcEEEEEcCCCeEEE-------------EEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEe--cCC
Confidence 88999998764 67888999999 8887766532211 111122333333332221 111
Q ss_pred CCCccceeeEeeecccccccccccc----hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccce
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGE----EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFI 293 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~----~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~ 293 (845)
.. +.++.............. ..............+.+++++. ....+..++.
T Consensus 234 ~~-----v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--------------~~~~~~~~~~----- 289 (373)
T d2madh_ 234 GK-----ILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD--------------GIYLLTSEQS----- 289 (373)
T ss_pred ce-----EEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCC--------------eEEEecCCCc-----
Confidence 10 001111000000000000 0000000000012233333332 1122223333
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCE--EEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEE
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGEC--LLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLA 370 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~--Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVa 370 (845)
.+++...++.+.+||..+++.+..+. +...+.+++|+|||+. +++++.|+ |+|||+.+++.+.++..+....+.++
T Consensus 290 ~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~ 368 (373)
T d2madh_ 290 AWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLS 368 (373)
T ss_pred eEEeecCCCeEEEEECCCCcEEEEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEE
Confidence 55677778899999999999988876 4567899999999984 46778888 99999999999999998888888887
Q ss_pred Ec
Q psy467 371 VT 372 (845)
Q Consensus 371 fS 372 (845)
+.
T Consensus 369 ~~ 370 (373)
T d2madh_ 369 VM 370 (373)
T ss_pred Ee
Confidence 65
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=6.2e-17 Score=170.29 Aligned_cols=282 Identities=12% Similarity=0.145 Sum_probs=178.4
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEEC-CCcEEEEECCCCcEEEEE---cCCCCCe
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTL---NGHKSSI 103 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~-DGtV~VWDl~tg~~v~~l---~~h~~~V 103 (845)
.+++++.|++|++|++.+...+.. ...|...+.+|+|+|||++|++++. |+.|.+|++........+ ..+...+
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p 85 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL 85 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence 456777999999999865443322 2358889999999999999966554 899999999865432222 2244557
Q ss_pred EEEEEccCCCEEEEEEC-CCeEEEEECCCCceEEE--EcCCCCCeEEEEEecCCCEEEEEeCC-CcEEEeeeeccCCcee
Q psy467 104 TSVDFHPYGDYLCSGSL-DSFIKLWDLRRKGCIYT--YRGHSKSINSIRFSPDGQWIASGGED-GVVRIGASFHLTNTSI 179 (845)
Q Consensus 104 ~~lafspdg~~Lasgs~-DG~I~IWDl~t~~~l~~--~~~h~~~V~sLafSPdg~~Lasgs~D-G~I~I~~~~~~~~~~I 179 (845)
..++|+|||++|++++. ++.|.+|+......... ...+...+.++.++|+++++++++.+ ..+.+
T Consensus 86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~----------- 154 (333)
T d1ri6a_ 86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICL----------- 154 (333)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEE-----------
T ss_pred eEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeE-----------
Confidence 78999999999998885 67899998876654433 33466778899999999998877754 45777
Q ss_pred EEEECCCCccCC--------CCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccC
Q psy467 180 HVVDLSLVHPLG--------TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIAN 251 (845)
Q Consensus 180 ~vWDl~tg~~l~--------~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~ 251 (845)
|+........ .........+.+++++............ ..++.+.........
T Consensus 155 --~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~------------ 215 (333)
T d1ri6a_ 155 --FTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS-----VDVWELKDPHGNIEC------------ 215 (333)
T ss_dssp --EEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE-----EEEEESSCTTSCCEE------------
T ss_pred --EEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCc-----eEEEeecccccceee------------
Confidence 6655432211 1112344567888887766544332221 111111000000000
Q ss_pred CCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE---EecCCCCCEEEE
Q psy467 252 PCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS---TTEKNSSTIRRL 328 (845)
Q Consensus 252 ~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~---tl~gh~~~Vtsl 328 (845)
...+...+.. .........+++++|++. +++++..++.+.+|++....... ....+...+.++
T Consensus 216 --~~~~~~~~~~--------~~~~~~~~~~~~s~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 281 (333)
T d1ri6a_ 216 --VQTLDMMPEN--------FSDTRWAADIHITPDGRH----LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGF 281 (333)
T ss_dssp --EEEEECSCTT--------CCSCCCEEEEEECTTSSE----EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCE
T ss_pred --eeeeeeeecC--------CCccccceeEEEecccCc----eeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEE
Confidence 0011111111 112234567888999883 56666778899999886543222 222344567899
Q ss_pred EEeCCCCEEEEEeCC-C-EEEEEec--CCce
Q psy467 329 TFSEGGECLLGGDTE-G-LKVYGWE--PARQ 355 (845)
Q Consensus 329 afSpdG~~Lasgs~D-G-I~IWDl~--tgk~ 355 (845)
+|+|||++|++++.+ + |++|+++ +|++
T Consensus 282 a~spDGk~l~va~~~~~~v~v~~id~~tG~l 312 (333)
T d1ri6a_ 282 NVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 312 (333)
T ss_dssp EECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred EEeCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence 999999999888765 4 9999664 5544
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.76 E-value=3e-16 Score=162.21 Aligned_cols=254 Identities=15% Similarity=0.155 Sum_probs=183.1
Q ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE-EEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La-sgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
++++.+++|.+||+++++.+.++... ..+..++|+|||++|+ +++.++.|.+||+.+++.+..+..+. .+..++|++
T Consensus 6 V~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~~ 83 (301)
T d1l0qa2 6 IANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSP 83 (301)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECT
T ss_pred EEECCCCEEEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-ccccccccc
Confidence 45667899999999999999999744 4578999999999875 56678999999999999999987655 578999999
Q ss_pred CCCEEEEE-eCCCcEEEeeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 153 DGQWIASG-GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 153 dg~~Lasg-s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
++.++++. ..++.+.+ |+..+++...... ......+.+++++..+......... +.++..
T Consensus 84 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~-----~~~~~~ 145 (301)
T d1l0qa2 84 DGKQVYVTNMASSTLSV-------------IDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKT-----VSVINT 145 (301)
T ss_dssp TSSEEEEEETTTTEEEE-------------EETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTE-----EEEEET
T ss_pred ccccccccccccceeee-------------cccccceeeeeccccccceEEEeecCCCeeeeeeccccc-----eeeeec
Confidence 99876554 45667778 9998877654433 3445678888888876554332221 111110
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEEC
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDL 309 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl 309 (845)
... ..+. .......+..++++|++. .+++++ .++.+.+|+.
T Consensus 146 ~~~---------------------~~~~------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 187 (301)
T d1l0qa2 146 VTK---------------------AVIN------------TVSVGRSPKGIAVTPDGT-----KVYVANFDSMSISVIDT 187 (301)
T ss_dssp TTT---------------------EEEE------------EEECCSSEEEEEECTTSS-----EEEEEETTTTEEEEEET
T ss_pred ccc---------------------ceee------------ecccCCCceEEEeecccc-----ceeeecccccccccccc
Confidence 000 0000 011123456788888887 555555 4577888998
Q ss_pred CCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC---C-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE----
Q psy467 310 EKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE---G-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR---- 380 (845)
Q Consensus 310 ~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D---G-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS---- 380 (845)
...+....+..+ ..+..++|+++|..+++++.+ + |++||+.+++.+..+..+ ..+++++|+ ||++|+++
T Consensus 188 ~~~~~~~~~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~ 265 (301)
T d1l0qa2 188 VTNSVIDTVKVE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFC 265 (301)
T ss_dssp TTTEEEEEEECS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTT
T ss_pred cceeeeeccccc-CCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCC
Confidence 888877777654 557889999999988766433 4 999999999998888754 568999999 99877544
Q ss_pred --EEEEeeC
Q psy467 381 --VGTWSHQ 387 (845)
Q Consensus 381 --VsiW~~d 387 (845)
|.+|...
T Consensus 266 ~~i~v~D~~ 274 (301)
T d1l0qa2 266 NTVSVIDTA 274 (301)
T ss_dssp TEEEEEETT
T ss_pred CeEEEEECC
Confidence 8999754
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.76 E-value=2.1e-17 Score=174.03 Aligned_cols=299 Identities=11% Similarity=-0.023 Sum_probs=193.6
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc-CCCCCeEEEEEccCCCEEEE-EECCCeEEEEECCCCceEEEEcCC
Q psy467 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYGDYLCS-GSLDSFIKLWDLRRKGCIYTYRGH 141 (845)
Q Consensus 64 LafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~-~h~~~V~~lafspdg~~Las-gs~DG~I~IWDl~t~~~l~~~~~h 141 (845)
++|++++++|++++.+++|.+||+.+++.+.++. .+...+.+++|+|||+++++ ++.++.|.+||+.+++.+..+...
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~ 81 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 81 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence 4789999999999999999999999999999886 35566889999999998754 557899999999999988877543
Q ss_pred C------CCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC----CCCCcceeecCCCCeEE
Q psy467 142 S------KSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP----PQYTSSVPFSHNTSLRK 211 (845)
Q Consensus 142 ~------~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~----~~~i~svs~spdg~~l~ 211 (845)
. ..+..++|+|||+++++++.+..... ..+......+.+||..+++...... +.....+.+++++..+.
T Consensus 82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
T d1jmxb_ 82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLN-DHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYV 160 (346)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECS-SCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEE
T ss_pred ccccccCCceEEEEEecCCCEEEEEecCCccee-eeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEE
Confidence 2 23567899999999988765432222 2233344556669998877654432 34455566666665443
Q ss_pred EEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccC--ceeEEEcCCCCc
Q psy467 212 SFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVS--RTSLSILPQSPM 289 (845)
Q Consensus 212 ~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~--I~slafSPdg~~ 289 (845)
. . .. ..++.+.......... .......+.++|++.............. .....+.+...
T Consensus 161 ~-~-~~-------~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 221 (346)
T d1jmxb_ 161 A-G-PD-------IYKMDVKTGKYTVALP---------LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQ- 221 (346)
T ss_dssp E-S-SS-------EEEECTTTCCEEEEEC---------STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC------
T ss_pred e-C-Cc-------ceEEEccCCCEEEEEe---------cCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCce-
Confidence 2 1 11 1122211111000000 0001122334444431110000000000 01112222332
Q ss_pred ccceEEEEEeCCCeEEEEECCCCeEEEE-ecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecCCCCCeEE
Q psy467 290 LCFILTTSSSADRTVNFWDLEKFSLVST-TEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMGWGKVQD 368 (845)
Q Consensus 290 ~~~~lLatgs~DG~I~IWDl~s~~~l~t-l~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~h~~~Vts 368 (845)
.++++..++.+.+||+.++..... +..|...+..+.+++++.+++.+..+.|.+||..+++.+..+. +...+.+
T Consensus 222 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~ 296 (346)
T d1jmxb_ 222 ----DPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN-LDHTYYC 296 (346)
T ss_dssp ------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEEEEE-CSSCCCE
T ss_pred ----eEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecCCeEEEEECCCCcEEEEEc-CCCCEEE
Confidence 556666778899999998876544 4567888999999999999888877669999999999888776 4457999
Q ss_pred EEEc-CCceEEEE-----EEEEeeC
Q psy467 369 LAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 369 VafS-dg~lLaaS-----VsiW~~d 387 (845)
++|+ ||++|+++ |.+|..+
T Consensus 297 va~s~DG~~l~v~~~d~~v~v~D~~ 321 (346)
T d1jmxb_ 297 VAFDKKGDKLYLGGTFNDLAVFNPD 321 (346)
T ss_dssp EEECSSSSCEEEESBSSEEEEEETT
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECc
Confidence 9999 99999988 9999664
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.74 E-value=4.8e-17 Score=173.36 Aligned_cols=304 Identities=11% Similarity=0.001 Sum_probs=190.6
Q ss_pred EEEEEEecCCCCEEEEEe-----CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE----------CCCcE
Q psy467 18 VNCLALGKKSGQVLATGG-----DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC----------QSGSI 82 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs-----~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs----------~DGtV 82 (845)
+.-.+.+| +++.+++.. .++.|.+||..+++.+.++..+..+ .++|||||++|++.+ .++.|
T Consensus 4 ~~~~a~sp-dg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v 80 (355)
T d2bbkh_ 4 RILEAPAP-DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYV 80 (355)
T ss_dssp CBCCCCCC-CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred cEeEeeCC-CCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEE
Confidence 33345678 888887653 3557999999999999988766554 799999999887643 47899
Q ss_pred EEEECCCCcEEEEEcCCCC-------CeEEEEEccCCCEEEEEE--CCCeEEEEECCCCceEEEEcCCCC-------CeE
Q psy467 83 KIWNLAVPTVQRTLNGHKS-------SITSVDFHPYGDYLCSGS--LDSFIKLWDLRRKGCIYTYRGHSK-------SIN 146 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~-------~V~~lafspdg~~Lasgs--~DG~I~IWDl~t~~~l~~~~~h~~-------~V~ 146 (845)
.+||+.+++.+..+..+.. ....++|+++++++++++ .+..+.+|+..+++.+..+..+.. ...
T Consensus 81 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d2bbkh_ 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDT 160 (355)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTE
T ss_pred EEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcc
Confidence 9999999998887753322 235689999999887765 456899999999988877764322 223
Q ss_pred EEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 147 SIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 147 sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
.+.+++|++.++... .++.+.+ ++......... ..+....+.+++..+..... .. .+
T Consensus 161 ~~~~~~dg~~~~v~~~~~~~~~~-------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~-----~~ 218 (355)
T d2bbkh_ 161 FFMHCRDGSLAKVAFGTEGTPEI-------------THTEVFHPEDE---FLINHPAYSQKAGRLVWPTY-TG-----KI 218 (355)
T ss_dssp EEEEETTSCEEEEECCSSSCCEE-------------EECCCCSCTTS---CBCSCCEEETTTTEEEEEBT-TS-----EE
T ss_pred eEEEcCCCCEEEEEecCCCeEEE-------------Eecccccceec---ceeeeccccCCCCeEEEecC-CC-----eE
Confidence 456666666655433 3334444 67665544221 12233344444443332211 11 11
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC----
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD---- 301 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D---- 301 (845)
.++.+.................. ....+.|+ ....+++++++. .++....+
T Consensus 219 ~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~p~--------------~~~~~~~~~d~~-----~~~~~~~~~~~~ 273 (355)
T d2bbkh_ 219 HQIDLSSGDAKFLPAVEALTEAE------RADGWRPG--------------GWQQVAYHRALD-----RIYLLVDQRDEW 273 (355)
T ss_dssp EEEECTTSSCEECCCEESSCHHH------HHTTEEEC--------------SSSCEEEETTTT-----EEEEEEEECCTT
T ss_pred EEEecCCCcEEEEeccCCcccce------Eeeeeecc--------------ceEEEEEeCCCC-----eEEEEeccCCce
Confidence 12211111000000000000000 00111122 234577788877 44444332
Q ss_pred ------CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCC--EEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 302 ------RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE--CLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 302 ------G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~--~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
+.|.+||..+++.+.++.. ...+.+++|+|||+ ++++++.|+ |+|||.++++.+.++..+......+.+.
T Consensus 274 ~~~~~~~~v~v~d~~t~~~~~~~~~-~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~ 352 (355)
T d2bbkh_ 274 RHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTA 352 (355)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECC
T ss_pred eecCCCCeEEEEeCCCCcEEEEecC-CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEeC
Confidence 4799999999999888764 35689999999998 345666788 9999999999999998776666666554
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.74 E-value=2.4e-17 Score=172.83 Aligned_cols=298 Identities=10% Similarity=0.041 Sum_probs=192.7
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCC--CCCeEEEEEccCCCEEE-EEECCCeEEEEECCCCceEEEEcCCCC----
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGH--KSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSK---- 143 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h--~~~V~~lafspdg~~La-sgs~DG~I~IWDl~t~~~l~~~~~h~~---- 143 (845)
+|+++++.|++|.+||+.+++.+..+..+ ...+.+++|+|||++++ +++.++.|.+||+.+++.+..+..+..
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~ 81 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence 58999999999999999999999988643 45578999999999875 566889999999999999988865433
Q ss_pred -CeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCc
Q psy467 144 -SINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGT 221 (845)
Q Consensus 144 -~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~ 221 (845)
.+..++|+||+++++++..+..... .........+.+||..++....... ...+..++++++|+.+....+ ...
T Consensus 82 ~~~~~v~~s~dg~~l~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~-- 157 (337)
T d1pbyb_ 82 KSLFGAALSPDGKTLAIYESPVRLEL-THFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGR-DLH-- 157 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECS-SCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESS-SEE--
T ss_pred cceeeEEEcCCCcEEEEeecCCccee-eeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcC-Ccc--
Confidence 3457899999999988876543333 2222344556669999887654433 456778999999998876422 111
Q ss_pred cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 222 KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 222 ~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
+++............ ........+.+++......................+.. ....++.+
T Consensus 158 -----~~d~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 218 (337)
T d1pbyb_ 158 -----VMDPEAGTLVEDKPI---------QSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDID-----PADPTAYR 218 (337)
T ss_dssp -----EEETTTTEEEEEECS---------TTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSC-----TTSGGGEE
T ss_pred -----eeeeecCcEEEEeec---------CCccccceecCCcceeeccccccceeeeeeeeeeeccc-----eeeecccC
Confidence 222111110000000 00001111222221000000000000111111122222 12233345
Q ss_pred CeEEEEECCCCeEEEE-ecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEE
Q psy467 302 RTVNFWDLEKFSLVST-TEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWF 378 (845)
Q Consensus 302 G~I~IWDl~s~~~l~t-l~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLa 378 (845)
+.+.+||..++..... +..+...+..+.+++++.++++++ + |++||+.+++.+..+. +...+.+++|+ ||++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~ 295 (337)
T d1pbyb_ 219 TGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAY--NVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVW 295 (337)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEE--SEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEE
T ss_pred ccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEcc--ccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEE
Confidence 6799999998876543 456777899999999999987764 5 9999999999988875 56778999999 999998
Q ss_pred EE-----EEEEeeC-CCCCccc
Q psy467 379 RR-----VGTWSHQ-DSGFSTL 394 (845)
Q Consensus 379 aS-----VsiW~~d-~~~~~~~ 394 (845)
++ |.+|... .+.+..+
T Consensus 296 v~~~~~~i~v~D~~t~~~v~~i 317 (337)
T d1pbyb_ 296 LGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp EESBSSEEEEEETTTCCEEEEE
T ss_pred EEeCCCcEEEEECCCCcEEEEE
Confidence 88 8899764 3444333
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=7.7e-14 Score=146.19 Aligned_cols=260 Identities=10% Similarity=0.104 Sum_probs=165.9
Q ss_pred cceeeee------E--EeccCCCcEEEEEEecCCCCEEEEEe-CCCeEEEEECCCCeeEEEe---cCCCCCeEEEEEcCC
Q psy467 2 RAKVEKA------E--DFMAHGASVNCLALGKKSGQVLATGG-DDKKVNLWALGKSNCIMSL---SGHSTPVESVQFGNG 69 (845)
Q Consensus 2 ~irlw~l------~--~L~gH~~~V~~LafSp~dg~~LaTgs-~DG~I~IWdl~t~~~i~~l---~~h~~~V~sLafSpd 69 (845)
+|++|++ + +...|.+.|.+|+|+| +|++|++++ .|+.|++|++........+ ..+...+..++|+||
T Consensus 15 ~I~v~~~~~~~~l~~~~~~~~~~~v~~la~sp-DG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spD 93 (333)
T d1ri6a_ 15 QIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQ 93 (333)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTT
T ss_pred cEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCC
Confidence 4678874 2 3347889999999999 899886655 5899999998765432222 234556778999999
Q ss_pred CCEEEEEEC-CCcEEEEECCCCcEEEE--EcCCCCCeEEEEEccCCCEEEEEEC-CCeEEEEECCCCceEEE------Ec
Q psy467 70 EETLSAGCQ-SGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCSGSL-DSFIKLWDLRRKGCIYT------YR 139 (845)
Q Consensus 70 g~~LaSgs~-DGtV~VWDl~tg~~v~~--l~~h~~~V~~lafspdg~~Lasgs~-DG~I~IWDl~t~~~l~~------~~ 139 (845)
|++|++++. ++.|.+|+......... ...+...+.++.++|+++++++++. +..|.+|+......... ..
T Consensus 94 g~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (333)
T d1ri6a_ 94 GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 173 (333)
T ss_dssp SSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC
T ss_pred CCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeee
Confidence 999999885 67899999887654433 3346677889999999998888774 45799999876533221 12
Q ss_pred CCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccC-------C-----CCCCCCCcceeecCC
Q psy467 140 GHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPL-------G-----TPPPQYTSSVPFSHN 206 (845)
Q Consensus 140 ~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l-------~-----~~~~~~i~svs~spd 206 (845)
........++|++++.+++... ..+...+ |+....... . .........+.++++
T Consensus 174 ~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 240 (333)
T d1ri6a_ 174 VEGAGPRHMVFHPNEQYAYCVNELNSSVDV-------------WELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD 240 (333)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEE-------------EESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT
T ss_pred ecCCCccEEEEeccceeEEeeccccCceEE-------------EeecccccceeeeeeeeeeecCCCccccceeEEEecc
Confidence 2445678899999998877665 4455566 443322110 0 011233445678888
Q ss_pred CCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 207 TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 207 g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
++.+......... + ..+....++..............+..++|+||
T Consensus 241 ~~~~~~~~~~~~~-------~---------------------------~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spD 286 (333)
T d1ri6a_ 241 GRHLYACDRTASL-------I---------------------------TVFSVSEDGSVLSKEGFQPTETQPRGFNVDHS 286 (333)
T ss_dssp SSEEEEEETTTTE-------E---------------------------EEEEECTTSCCEEEEEEEECSSSCCCEEECTT
T ss_pred cCceeeecccCCe-------E---------------------------EEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCC
Confidence 8876554433322 1 11122222221111111122234678899999
Q ss_pred CCcccceEEEEE-eCCCeEEEE--ECCCCeE
Q psy467 287 SPMLCFILTTSS-SADRTVNFW--DLEKFSL 314 (845)
Q Consensus 287 g~~~~~~lLatg-s~DG~I~IW--Dl~s~~~ 314 (845)
|+ +|+++ ..++.|.+| |..+|++
T Consensus 287 Gk-----~l~va~~~~~~v~v~~id~~tG~l 312 (333)
T d1ri6a_ 287 GK-----YLIAAGQKSHHISVYEIVGEQGLL 312 (333)
T ss_dssp SS-----EEEEECTTTCEEEEEEEETTTTEE
T ss_pred CC-----EEEEEECCCCeEEEEEEECCCCcE
Confidence 98 55555 456899998 5567754
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.55 E-value=2e-12 Score=138.32 Aligned_cols=271 Identities=11% Similarity=-0.027 Sum_probs=173.7
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEe----------CCCeEEEEECCCCeeEEEecCCCCCe-------EEEEEcCCCC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGG----------DDKKVNLWALGKSNCIMSLSGHSTPV-------ESVQFGNGEE 71 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs----------~DG~I~IWdl~t~~~i~~l~~h~~~V-------~sLafSpdg~ 71 (845)
.++.++... .++|+| +|++|++++ .++.|.+||..+++.+..+..+.... ..+.|+++++
T Consensus 61 ~~~~~~~~~--~~a~Sp-DG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 137 (373)
T d2madh_ 61 GHVNGGFLP--NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA 137 (373)
T ss_pred EEEeCCCCc--cEEEcC-CCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCC
Confidence 455555543 799999 999998875 35789999999999988887665544 4578888888
Q ss_pred EEEEEE--CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE-EEEECCCeEEEEECCCCceEEEEcCC------C
Q psy467 72 TLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRRKGCIYTYRGH------S 142 (845)
Q Consensus 72 ~LaSgs--~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L-asgs~DG~I~IWDl~t~~~l~~~~~h------~ 142 (845)
.++... .++.+.+|+..+.+...... ...++.++|+++.+ ++.+.|+.+.+|+...+........+ .
T Consensus 138 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (373)
T d2madh_ 138 DLLFFQFAAGPAVGLVVQGGSSDDQLLS----SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQN 213 (373)
T ss_pred cEEEEEEcCCCceEEeeccCCeEEEEec----cceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCcc
Confidence 766554 35788999998877655443 35688999998754 67889999999999888776655422 1
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCC-------------C-CCCCCCcceeecCCCC
Q psy467 143 KSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG-------------T-PPPQYTSSVPFSHNTS 208 (845)
Q Consensus 143 ~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~-------------~-~~~~~i~svs~spdg~ 208 (845)
.....+.+++++. ++..+.++.+.+ |+........ . ..+.....+++++++.
T Consensus 214 ~~~~~~~~~~~~~-~~~~~~~~~v~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 279 (373)
T d2madh_ 214 LLTQPAQANKSGR-IVWPVYSGKILQ-------------ADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD 279 (373)
T ss_pred ceeeeEEECCCce-EEEecCCceEEE-------------EEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCC
Confidence 2233455565554 445567778888 5544432210 0 0123334556666666
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcC-CCCcCCCCcccccccCceeEEEcCCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQP-HRSLNRSGTCVPVSVSRTSLSILPQS 287 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fsp-dg~~~~~~~~~~~~~~I~slafSPdg 287 (845)
.+......... +... .... ....|.. .+. ....+.+...+..++|+|||
T Consensus 280 ~~~~~~~~~~~-------~~~~-------~~~~-------------~v~~~d~~t~~---~~~~~~~~~~~~~~a~spDG 329 (373)
T d2madh_ 280 GIYLLTSEQSA-------WKLH-------AAAK-------------EVTSVTGLVGQ---TSSQISLGHDVDAISVAQDG 329 (373)
T ss_pred eEEEecCCCce-------EEee-------cCCC-------------eEEEEECCCCc---EEEEecCCCCeeEEEECCCC
Confidence 55443221111 0000 0000 1111111 111 01112334567889999999
Q ss_pred CcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCC
Q psy467 288 PMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEG 333 (845)
Q Consensus 288 ~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpd 333 (845)
+.+ ++++++.|+.|++||+.+++.+.++..+....+.+++.++
T Consensus 330 ~~~---l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~ 372 (373)
T d2madh_ 330 GPD---LYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNE 372 (373)
T ss_pred CEE---EEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEecC
Confidence 832 4578899999999999999999999988777888877654
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.52 E-value=3.1e-13 Score=146.07 Aligned_cols=297 Identities=6% Similarity=-0.105 Sum_probs=180.1
Q ss_pred CCCcEEEEEEecCCCCEEEE---EeCCC--eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE----------C
Q psy467 14 HGASVNCLALGKKSGQVLAT---GGDDK--KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC----------Q 78 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaT---gs~DG--~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs----------~ 78 (845)
+.+....++..+ +++.... ...+| .|.+||..+++.+..+..+... .++|+|||++|++.+ .
T Consensus 18 ~~g~~~~~a~~~-~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~ 94 (368)
T d1mdah_ 18 SDGSSCDHGPGA-ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKR 94 (368)
T ss_dssp CCCCCBCCCCCC-CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSE
T ss_pred cCCCccccccCC-CCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCcccccccc
Confidence 455556666677 6664322 23334 5777799999999988877665 589999999988765 3
Q ss_pred CCcEEEEECCCCcEEEEEcCCCC-------CeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEE
Q psy467 79 SGSIKIWNLAVPTVQRTLNGHKS-------SITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150 (845)
Q Consensus 79 DGtV~VWDl~tg~~v~~l~~h~~-------~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLaf 150 (845)
|+.|.+||..+++++..+..+.. ....++|+|||++++++. .++.+.+||+.+++.+..+..+..... +
T Consensus 95 d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~---~ 171 (368)
T d1mdah_ 95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI---H 171 (368)
T ss_dssp EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC---E
T ss_pred CCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE---c
Confidence 67899999999999888754322 234689999999998776 578999999999998888765443221 1
Q ss_pred ecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCC--------CCCCCCCcceeecCCCCeEEEEecCCCCCcc
Q psy467 151 SPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG--------TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTK 222 (845)
Q Consensus 151 SPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~--------~~~~~~i~svs~spdg~~l~~~~~h~~~~~~ 222 (845)
......+++.+.||.+.. |+........ ...........+.+++..+....+ .
T Consensus 172 ~~~~~~~v~~~~Dg~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~--- 232 (368)
T d1mdah_ 172 PGAAATHYLGSCPASLAA-------------SDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVAS---S--- 232 (368)
T ss_dssp EEETTEEECCCCTTSCEE-------------EECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSS---C---
T ss_pred cCCCceEEEEcCCCCEEE-------------EEecCCceeeeeeecccccccccceeecccccCcEEEEecCC---C---
Confidence 112345566667777766 5544332210 011223334555555544332111 0
Q ss_pred ceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE-eCC
Q psy467 223 AKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS-SAD 301 (845)
Q Consensus 223 ~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg-s~D 301 (845)
+.+........ .+....+..................+++++++. .++.. ..+
T Consensus 233 --v~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~-----~~~v~~~~~ 285 (368)
T d1mdah_ 233 --ILQGDIPAAGA--------------------TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD-----GIMILTVEH 285 (368)
T ss_dssp --CEEEECCSSCC--------------------EEECCCCSSCTHHHHTTEEECSSSCEEEETTTT-----EEEEEEEEC
T ss_pred --EEEEeecCCce--------------------EEEeecccccceeeeeeecCCCceeEEEcCCCC-----EEEEEecCC
Confidence 00111000000 000000000000000000112234577888877 33332 222
Q ss_pred --------CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCC-EE-EEEeCCC-EEEEEecCCceEEEecCCC
Q psy467 302 --------RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE-CL-LGGDTEG-LKVYGWEPARQYDAQPMGW 363 (845)
Q Consensus 302 --------G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~-~L-asgs~DG-I~IWDl~tgk~l~tl~~h~ 363 (845)
..|.+||..+++.+.++.. ...+.+++|||||+ +| +++..++ |++||..+++.+.++....
T Consensus 286 ~~~~~~~~~~v~v~D~~t~~~~~~~~~-~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~ 357 (368)
T d1mdah_ 286 SRSCLAAAENTSSVTASVGQTSGPISN-GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp SSCTTSCEEEEEEEESSSCCEEECCEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred CceeecCCceEEEEECCCCcEeEEecC-CCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCC
Confidence 3599999999998888764 35788999999997 33 4556677 9999999999999987543
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.50 E-value=4.2e-13 Score=142.28 Aligned_cols=271 Identities=8% Similarity=-0.029 Sum_probs=173.4
Q ss_pred eEEEEEcCCCCEEEEEE-----CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE----------CCCeEE
Q psy467 61 VESVQFGNGEETLSAGC-----QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS----------LDSFIK 125 (845)
Q Consensus 61 V~sLafSpdg~~LaSgs-----~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs----------~DG~I~ 125 (845)
+.-.+.+||++.+++.. .+++|.+||..+++.+.++..+.. ..++|+|||++|++++ .|+.|.
T Consensus 4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~--~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~ 81 (355)
T d2bbkh_ 4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL--PNPVVADDGSFIAHASTVFSRIARGERTDYVE 81 (355)
T ss_dssp CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS--CEEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred cEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCC--CceEEcCCCCEEEEEeCCCccccccCCCCEEE
Confidence 33446689999987764 356799999999999998876544 3799999999887643 478999
Q ss_pred EEECCCCceEEEEcCCC-------CCeEEEEEecCCCEEEEEe--CCCcEEEeeeeccCCceeEEEECCCCccCCCCCC-
Q psy467 126 LWDLRRKGCIYTYRGHS-------KSINSIRFSPDGQWIASGG--EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP- 195 (845)
Q Consensus 126 IWDl~t~~~l~~~~~h~-------~~V~sLafSPdg~~Lasgs--~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~- 195 (845)
+||+.+++.+..+..+. .....++|+|++++++++. .+..+.+ ||..+++.+.....
T Consensus 82 v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~-------------~~~~~~~~~~~~~~~ 148 (355)
T d2bbkh_ 82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGV-------------VDLEGKAFKRMLDVP 148 (355)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEE-------------EETTTTEEEEEEECC
T ss_pred EEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeee-------------eecCCCcEeeEEecC
Confidence 99999999888775332 2345689999999887765 4556777 99988776332210
Q ss_pred --------CCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCC
Q psy467 196 --------QYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNR 267 (845)
Q Consensus 196 --------~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~ 267 (845)
.....+.++++++.+......... + ..+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~-------~-----------------------------~~~~~~~---- 188 (355)
T d2bbkh_ 149 DCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGT-------P-----------------------------EITHTEV---- 188 (355)
T ss_dssp SEEEEEEEETTEEEEEETTSCEEEEECCSSSC-------C-----------------------------EEEECCC----
T ss_pred CcceEeecCCcceEEEcCCCCEEEEEecCCCe-------E-----------------------------EEEeccc----
Confidence 112223444444433221111110 0 0000000
Q ss_pred CCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE--EEecCC----------CCCEEEEEEeCCCC
Q psy467 268 SGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV--STTEKN----------SSTIRRLTFSEGGE 335 (845)
Q Consensus 268 ~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l--~tl~gh----------~~~VtslafSpdG~ 335 (845)
........+...++++++. .++.++.++.+++|++..+... .....+ ......+++++++.
T Consensus 189 --~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~ 261 (355)
T d2bbkh_ 189 --FHPEDEFLINHPAYSQKAG-----RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD 261 (355)
T ss_dssp --CSCTTSCBCSCCEEETTTT-----EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTT
T ss_pred --ccceecceeeeccccCCCC-----eEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCC
Confidence 0001122334556666666 7888899999999999877532 122222 12345688999999
Q ss_pred EEEEEeCC----------C-EEEEEecCCceEEEecCCCCCeEEEEEc-CCc-eEE-EE-----EEEEee-CCCCCccc
Q psy467 336 CLLGGDTE----------G-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQ-LWF-RR-----VGTWSH-QDSGFSTL 394 (845)
Q Consensus 336 ~Lasgs~D----------G-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~-lLa-aS-----VsiW~~-d~~~~~~~ 394 (845)
.++....+ . |.+||..+++.+..+.. ...+.+++|+ ||+ +++ ++ |.+|.. .++.+..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~-~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i 339 (355)
T d2bbkh_ 262 RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV 339 (355)
T ss_dssp EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred eEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecC-CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEE
Confidence 88765432 2 89999999998887763 4568899999 887 343 33 888865 34444443
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.47 E-value=8.8e-12 Score=139.05 Aligned_cols=330 Identities=10% Similarity=0.073 Sum_probs=191.5
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC-----CCCCeEEEEEcCCCCEEEEEEC---------CCcEEEE
Q psy467 20 CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG-----HSTPVESVQFGNGEETLSAGCQ---------SGSIKIW 85 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-----h~~~V~sLafSpdg~~LaSgs~---------DGtV~VW 85 (845)
.+.|.+ +++++.. .++.|.+||+.+++....+.. |...|.++.|||||++|+.++. ++.+.+|
T Consensus 21 ~~~W~~-d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~ 97 (470)
T d2bgra1 21 SLRWIS-DHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (470)
T ss_dssp CCEECS-SSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CCEeCC-CCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence 578988 7777754 477899999999987765544 4578999999999999998753 5678999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCC------------------CCCeEE
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH------------------SKSINS 147 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h------------------~~~V~s 147 (845)
|+.+++ +..+..+...+..+.|+|||+++|... ++.+.+|+..++...+....+ .+....
T Consensus 98 d~~~~~-~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~ 175 (470)
T d2bgra1 98 DLNKRQ-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (470)
T ss_dssp ETTTTE-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred ECCCCc-ccccccCCccccccccccCcceeeEee-cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccc
Confidence 999876 456777888999999999999999864 678999999888765543221 223456
Q ss_pred EEEecCCCEEEEEeCCCc-EEEeeee----------------------ccCCceeEEEECCCCccCCCCC----------
Q psy467 148 IRFSPDGQWIASGGEDGV-VRIGASF----------------------HLTNTSIHVVDLSLVHPLGTPP---------- 194 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~-I~I~~~~----------------------~~~~~~I~vWDl~tg~~l~~~~---------- 194 (845)
+.|||||++|+....|.. +..+... ......+.+|++..+.......
T Consensus 176 ~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 255 (470)
T d2bgra1 176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASM 255 (470)
T ss_dssp EEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHH
T ss_pred cEECCCCCccceeEecCCcCceEEEEeeccCCCCCCeeeeeccccccccCCcceEEEEECCCcceeeeccccccCCcccc
Confidence 889999999998865433 3221100 0122356778877766543322
Q ss_pred ---CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcc
Q psy467 195 ---PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271 (845)
Q Consensus 195 ---~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~ 271 (845)
...+..+.|.+++............ ...+.+..+........ .+... ........+. .
T Consensus 256 ~~~~~~~~~~~w~~~~~~~~~~~~r~~~--~~~~~~~~~d~~tg~~~-----~~~~~------~~~~~~~~~~-i----- 316 (470)
T d2bgra1 256 LIGDHYLCDVTWATQERISLQWLRRIQN--YSVMDICDYDESSGRWN-----CLVAR------QHIEMSTTGW-V----- 316 (470)
T ss_dssp HTSCEEEEEEEEEETTEEEEEEEESSTT--EEEEEEEEEETTTTEEE-----ECGGG------CEEEECSSSC-S-----
T ss_pred CCCCceEEEEEEcCCCceeEEEeeccCC--ceEEEEEEecCCCCcEE-----EEEEE------eeeeeeccce-e-----
Confidence 1223356666666644433222111 01111111111000000 00000 0011111110 0
Q ss_pred cccccCceeEEEcCCCCcccceEEEEEeCCCeEEE--EECCCCeEEEEecCCCCCEEEEEEeCCCCEE-EEEeCCC----
Q psy467 272 VPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNF--WDLEKFSLVSTTEKNSSTIRRLTFSEGGECL-LGGDTEG---- 344 (845)
Q Consensus 272 ~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~I--WDl~s~~~l~tl~gh~~~VtslafSpdG~~L-asgs~DG---- 344 (845)
.. ..-....+.+++... ++.....||..+| |+...+.. ..+..+...|..+ ++++++.+ +++..++
T Consensus 317 ~~--~~~~~~~~~~~~~~~---~~~~s~~dg~~~ly~~~~~g~~~-~~lt~g~~~v~~~-~~~d~~~iyf~a~~~~~~p~ 389 (470)
T d2bgra1 317 GR--FRPSEPHFTLDGNSF---YKIISNEEGYRHICYFQIDKKDC-TFITKGTWEVIGI-EALTSDYLYYISNEYKGMPG 389 (470)
T ss_dssp SS--SSCCCCEECTTSSEE---EEEEECTTSCEEEEEEETTCSCC-EESCCSSSCEEEE-EEECSSEEEEEESCGGGCTT
T ss_pred ec--ccCCCceeeecCCCc---EEEEeccCcCceeEEEeccCCce-eeeccCCeeEEEE-EEECCCEEEEEEecCCCCcc
Confidence 00 011223444444321 4566667776555 56554444 3444345567766 44455554 3443221
Q ss_pred -EEEEEec--CCceEEE----ecCCCCCeEEEEEc-CCceEEEE
Q psy467 345 -LKVYGWE--PARQYDA----QPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 345 -I~IWDl~--tgk~l~t----l~~h~~~VtsVafS-dg~lLaaS 380 (845)
-+||.+. .+..... +..|...+.+++|| ||++++..
T Consensus 390 ~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~ 433 (470)
T d2bgra1 390 GRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLR 433 (470)
T ss_dssp CBEEEEEETTCTTCEEESSTTTSTTTBCBEEEEECTTSSEEEEE
T ss_pred eEEEEEEECCCCCceeEecccccCCCCCEEEEEECCCCCEEEEE
Confidence 3566554 3333333 34678889999999 99998865
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.32 E-value=5.9e-11 Score=132.22 Aligned_cols=109 Identities=15% Similarity=0.175 Sum_probs=87.6
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeC---------CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGD---------DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~---------DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
+|..|...|.++.||| ||++|+.++. ++.+.|||+.+++ +..+..|...+..+.|||||++||.. .++
T Consensus 56 ~~~~~~~~i~~~~~Sp-Dg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~ 132 (470)
T d2bgra1 56 TFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGHKLAYV-WNN 132 (470)
T ss_dssp TTTTSSSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCTTEEEEEECSSTTCEEEE-ETT
T ss_pred hhhhccCccceeEECC-CCCEEEEEECCcceeeeccCceEEEEECCCCc-ccccccCCccccccccccCcceeeEe-ecc
Confidence 4566778999999999 9999998753 5678999999877 45678899999999999999999986 578
Q ss_pred cEEEEECCCCcEEEEEcCC------------------CCCeEEEEEccCCCEEEEEECC
Q psy467 81 SIKIWNLAVPTVQRTLNGH------------------KSSITSVDFHPYGDYLCSGSLD 121 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~~h------------------~~~V~~lafspdg~~Lasgs~D 121 (845)
.+.+|+..+++..+....+ .+....+.|+|||++|+....|
T Consensus 133 ~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d 191 (470)
T d2bgra1 133 DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN 191 (470)
T ss_dssp EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred cceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEec
Confidence 9999999988766543321 1234568899999999987654
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.28 E-value=1.2e-10 Score=129.46 Aligned_cols=292 Identities=8% Similarity=0.030 Sum_probs=185.0
Q ss_pred EEEEeCCCeEEEEECCCCeeEEEecC------------------------------CCCCeEEEEEcCCCCEEEEEE-CC
Q psy467 31 LATGGDDKKVNLWALGKSNCIMSLSG------------------------------HSTPVESVQFGNGEETLSAGC-QS 79 (845)
Q Consensus 31 LaTgs~DG~I~IWdl~t~~~i~~l~~------------------------------h~~~V~sLafSpdg~~LaSgs-~D 79 (845)
+++++.+|.|.+|++.+++.++++.- |........++|||++|++.. .+
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~ 93 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN 93 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence 56778899999999999998888632 223345555678999997765 57
Q ss_pred CcEEEEECCCCcEEEEEc-CCCCCeEEEEEccCCC--EEEEEECCC-----------------eEEEEECCCCceEEEEc
Q psy467 80 GSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYGD--YLCSGSLDS-----------------FIKLWDLRRKGCIYTYR 139 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~-~h~~~V~~lafspdg~--~Lasgs~DG-----------------~I~IWDl~t~~~l~~~~ 139 (845)
+.|.+||+++++....+. .+......++|+|+++ +++..+.+. .+..+|..+.+...++.
T Consensus 94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~ 173 (441)
T d1qnia2 94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVI 173 (441)
T ss_dssp TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEE
T ss_pred CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEe
Confidence 899999999998877664 3566789999999998 444444332 24568888888877776
Q ss_pred CCCCCeEEEEEecCCCEEEEEeCCCc-EEEeeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCC
Q psy467 140 GHSKSINSIRFSPDGQWIASGGEDGV-VRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 140 ~h~~~V~sLafSPdg~~Lasgs~DG~-I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~ 217 (845)
.. +.+..++|+|||+++++.+.+.. +.. ++..+........ ..+...+.++++|+.+.. .++
T Consensus 174 v~-~~p~~v~~spdGk~a~vt~~nse~~~~-------------id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v-~~~- 237 (441)
T d1qnia2 174 VD-GNLDNTDADYTGKYATSTCYNSERAVD-------------LAGTMRNDRDWVVVFNVERIAAAVKAGNFKTI-GDS- 237 (441)
T ss_dssp ES-SCCCCEEECSSSSEEEEEESCTTCCSS-------------HHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCC-TTC-
T ss_pred cC-CCccceEECCCCCEEEEEecCCCceEE-------------EeccCcceEEEEEeCCccceEEEecCCCEEEe-CCC-
Confidence 43 45788999999999988876532 222 2332322211111 112234556677764321 111
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS 297 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat 297 (845)
. ...+ .... ....+.+-| .......++++|||++ ++++
T Consensus 238 -~----v~vv---d~~~------------------~~~v~~~IP------------vgksPhGv~vSPDGky----l~~~ 275 (441)
T d1qnia2 238 -K----VPVV---DGRG------------------ESEFTRYIP------------VPKNPHGLNTSPDGKY----FIAN 275 (441)
T ss_dssp -C----CCEE---ECSS------------------SCSSEEEEC------------CBSSCCCEEECTTSCE----EEEE
T ss_pred -C----cEEE---Eccc------------------CCceEEEEe------------CCCCccCceECCCCCE----EEEe
Confidence 1 0001 0000 001112222 2334567899999983 5567
Q ss_pred EeCCCeEEEEECCCCe-----------EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC----------Cce
Q psy467 298 SSADRTVNFWDLEKFS-----------LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP----------ARQ 355 (845)
Q Consensus 298 gs~DG~I~IWDl~s~~-----------~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t----------gk~ 355 (845)
+..+++|.+||+.+.. .+.-.....-.....+|+++|....+...|. |..|++.. ...
T Consensus 276 ~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v 355 (441)
T d1qnia2 276 GKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYI 355 (441)
T ss_dssp CTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCE
T ss_pred CCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCcee
Confidence 7889999999986521 1111111122356678999998888888999 99999852 124
Q ss_pred EEEe-----cCCCCCeEEEEEc-CCceEEEE
Q psy467 356 YDAQ-----PMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 356 l~tl-----~~h~~~VtsVafS-dg~lLaaS 380 (845)
+..+ .+|...+.+.+++ ||++|++.
T Consensus 356 ~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~ 386 (441)
T d1qnia2 356 RQKLDVQYQPGHNHASLTESRDADGKWLVVL 386 (441)
T ss_dssp EEEEECSSCEEEEEETTTTSTTCCCCEEEEE
T ss_pred EeccccccCCCCCccccccccCCCCcEEEec
Confidence 4445 3555556666778 99998865
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.21 E-value=4.5e-10 Score=120.66 Aligned_cols=268 Identities=10% Similarity=-0.057 Sum_probs=159.5
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEe----------CCCeEEEEECCCCeeEEEecCCCC-------CeEEEEEcCCCC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGG----------DDKKVNLWALGKSNCIMSLSGHST-------PVESVQFGNGEE 71 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs----------~DG~I~IWdl~t~~~i~~l~~h~~-------~V~sLafSpdg~ 71 (845)
..+.++... .++|+| +|+.|++++ .|+.|.+||..+++.+..+..+.. ....++|+|||+
T Consensus 60 ~~~~~~~~~--~~a~sp-Dg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk 136 (368)
T d1mdah_ 60 GHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSA 136 (368)
T ss_dssp EEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSS
T ss_pred EEEeCCCCC--cceECC-CCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCC
Confidence 345555544 589999 888888764 367899999999998887754322 234689999999
Q ss_pred EEEEEE-CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE------cCCCCC
Q psy467 72 TLSAGC-QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY------RGHSKS 144 (845)
Q Consensus 72 ~LaSgs-~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~------~~h~~~ 144 (845)
+|+++. .++.+.+||+.+++....+..+..... +......++..+.||.+.+|++......... ..+...
T Consensus 137 ~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (368)
T d1mdah_ 137 CLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI---HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCS 213 (368)
T ss_dssp CEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC---EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBC
T ss_pred EEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE---ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccc
Confidence 998876 579999999999999888875544321 1123456677788888888887654432222 223344
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC----CCCCCCcceeecCCCCeEEEEecCCCC-
Q psy467 145 INSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT----PPPQYTSSVPFSHNTSLRKSFTKGRPG- 219 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~----~~~~~i~svs~spdg~~l~~~~~h~~~- 219 (845)
+....+.+++..+... ++.+.+ .......+.+++......... ..+.....+++++++..+.........
T Consensus 214 ~~~~~~~~~g~~~~~~--~~~v~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~ 288 (368)
T d1mdah_ 214 SQAAQANYPGMLVWAV--ASSILQ---GDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRS 288 (368)
T ss_dssp SCCEEETTTTEEEECB--SSCCEE---EECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSC
T ss_pred eeecccccCcEEEEec--CCCEEE---EeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCce
Confidence 5567777777655543 344555 112222222233222211000 012334457777777765543221111
Q ss_pred CccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe
Q psy467 220 GTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS 299 (845)
Q Consensus 220 ~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs 299 (845)
...... ....|..... +....+.....+..++|+|||+.+ +++++.
T Consensus 289 ~~~~~~-----------------------------~v~v~D~~t~--~~~~~~~~~~~~~~~a~spDG~~~---ly~s~~ 334 (368)
T d1mdah_ 289 CLAAAE-----------------------------NTSSVTASVG--QTSGPISNGHDSDAIIAAQDGASD---NYANSA 334 (368)
T ss_dssp TTSCEE-----------------------------EEEEEESSSC--CEEECCEEEEEECEEEECCSSSCE---EEEEET
T ss_pred eecCCc-----------------------------eEEEEECCCC--cEeEEecCCCceeEEEECCCCCEE---EEEEeC
Confidence 000000 0111221111 001112234457789999998732 456777
Q ss_pred CCCeEEEEECCCCeEEEEecCC
Q psy467 300 ADRTVNFWDLEKFSLVSTTEKN 321 (845)
Q Consensus 300 ~DG~I~IWDl~s~~~l~tl~gh 321 (845)
.|+.|++||..+++.+.++...
T Consensus 335 ~~~~v~v~D~~tgk~~~~i~~g 356 (368)
T d1mdah_ 335 GTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp TTTEEEEEESSSCEEEEECCCC
T ss_pred CCCeEEEEECCCCCEEEEEECC
Confidence 8999999999999999998854
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.10 E-value=3.4e-10 Score=125.61 Aligned_cols=241 Identities=10% Similarity=0.072 Sum_probs=159.1
Q ss_pred CCCcEEEEEEecCCCCEEEEEe-CCCeEEEEECCCCeeEEEec-CCCCCeEEEEEcCCCC--EEEEEECCC---------
Q psy467 14 HGASVNCLALGKKSGQVLATGG-DDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEE--TLSAGCQSG--------- 80 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs-~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafSpdg~--~LaSgs~DG--------- 80 (845)
|.-...+..++| ||++|++.. .+++|.+||+.+++....+. .+...+..++|+|+++ |++..+.+.
T Consensus 70 hhP~~s~t~gtp-DGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~ 148 (441)
T d1qnia2 70 HHPHISMTDGRY-DGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTD 148 (441)
T ss_dssp CCCEEEEETTEE-EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSC
T ss_pred cCCCcceecccC-CCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccc
Confidence 555566677788 888886664 67899999999999887764 4677899999999998 555444332
Q ss_pred --------cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC-------------------------------
Q psy467 81 --------SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD------------------------------- 121 (845)
Q Consensus 81 --------tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D------------------------------- 121 (845)
.+..+|..+.+...++... +....++|+|+|+++++++.+
T Consensus 149 ~~~~~~~~~~~~iD~~t~~v~~qI~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~ 227 (441)
T d1qnia2 149 FSLDNSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVK 227 (441)
T ss_dssp CCGGGEEEEEEEEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHH
T ss_pred cccccccceEEeecCccceeeEEEecC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEec
Confidence 2456888888888777643 457889999999999887643
Q ss_pred ----------CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE-EeCCCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 122 ----------SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS-GGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 122 ----------G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las-gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
+.+.+++......+..+.... ....+.++|||+++++ +..++++.+ ||+.+....
T Consensus 228 dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgk-sPhGv~vSPDGkyl~~~~~~~~tvsv-------------~d~~k~~~~ 293 (441)
T d1qnia2 228 AGNFKTIGDSKVPVVDGRGESEFTRYIPVPK-NPHGLNTSPDGKYFIANGKLSPTVSV-------------IAIDKLDDL 293 (441)
T ss_dssp TTCCBCCTTCCCCEEECSSSCSSEEEECCBS-SCCCEEECTTSCEEEEECTTSSBEEE-------------EEGGGHHHH
T ss_pred CCCEEEeCCCCcEEEEcccCCceEEEEeCCC-CccCceECCCCCEEEEeCCcCCcEEE-------------EEeehhhhH
Confidence 234444444445555555433 3577899999998654 567889999 998754331
Q ss_pred CCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCc
Q psy467 191 GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGT 270 (845)
Q Consensus 191 ~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~ 270 (845)
+.++... . .++...+..-
T Consensus 294 ----------------------~~~~~~~-------~---------------------------~~~~~~~~~g------ 311 (441)
T d1qnia2 294 ----------------------FEDKIEL-------R---------------------------DTIVAEPELG------ 311 (441)
T ss_dssp ----------------------TTTSSCG-------G---------------------------GGEEECCBCC------
T ss_pred ----------------------hhccCCc-------c---------------------------eEEEeecccc------
Confidence 0000000 0 1121222111
Q ss_pred ccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC----------CeEEEEe-----cCCCCCEEEEEEeCCCC
Q psy467 271 CVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK----------FSLVSTT-----EKNSSTIRRLTFSEGGE 335 (845)
Q Consensus 271 ~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s----------~~~l~tl-----~gh~~~VtslafSpdG~ 335 (845)
-.....+|.++|. .+.+.+.|..|..|++.. ...+..+ .+|...+.+.+++|||+
T Consensus 312 -----lgplh~~fd~~g~-----~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk 381 (441)
T d1qnia2 312 -----LGPLHTTFDGRGN-----AYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGK 381 (441)
T ss_dssp -----SCEEEEEECSSSE-----EEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCC
T ss_pred -----cCcccceecCCce-----EEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCc
Confidence 1112234555555 788889999999999741 2344444 35655666677899999
Q ss_pred EEEEEeC
Q psy467 336 CLLGGDT 342 (845)
Q Consensus 336 ~Lasgs~ 342 (845)
||++++.
T Consensus 382 ~l~s~~k 388 (441)
T d1qnia2 382 WLVVLSK 388 (441)
T ss_dssp EEEEEES
T ss_pred EEEecCc
Confidence 9999943
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=5.4e-07 Score=91.02 Aligned_cols=234 Identities=14% Similarity=0.092 Sum_probs=138.0
Q ss_pred eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC---cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE
Q psy467 39 KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG---SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115 (845)
Q Consensus 39 ~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG---tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L 115 (845)
.|.|-|.+. .....+..+...+...+|||||+.||...... .+.+.+...+..... ..+........|+|+|+.+
T Consensus 20 ~l~i~d~dG-~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~i 97 (269)
T d2hqsa1 20 ELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKL 97 (269)
T ss_dssp EEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE-ECCSSCEEEEEECTTSSEE
T ss_pred EEEEEcCCC-CCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEE-eeeecccccceecCCCCee
Confidence 577778754 44444545677899999999999999876533 477777776665444 4467778899999999988
Q ss_pred EEEEC-CCe--EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE-eCCCcEEEeeeeccCCceeEEEECCCCccCC
Q psy467 116 CSGSL-DSF--IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG-GEDGVVRIGASFHLTNTSIHVVDLSLVHPLG 191 (845)
Q Consensus 116 asgs~-DG~--I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg-s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~ 191 (845)
+.... ++. +..+........ .............+++++..++.. ..+|...+ ...++..+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i-----------~~~~~~~~~~-- 163 (269)
T d2hqsa1 98 AFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQV-----------YKVNINGGAP-- 163 (269)
T ss_dssp EEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEE-----------EEEETTSSCC--
T ss_pred eEeeecCCccceeecccccccce-eeeeccccccccccccccccceecccccCCceE-----------eeeecccccc--
Confidence 77653 332 333333333222 222334444556677776654443 34444444 1144443322
Q ss_pred CCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcc
Q psy467 192 TPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271 (845)
Q Consensus 192 ~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~ 271 (845)
......... . ....|+|++.
T Consensus 164 -------------------~~~~~~~~~-------~---------------------------~~~~~spdg~------- 183 (269)
T d2hqsa1 164 -------------------QRITWEGSQ-------N---------------------------QDADVSSDGK------- 183 (269)
T ss_dssp -------------------EECCCSSSE-------E---------------------------EEEEECTTSS-------
T ss_pred -------------------eeeeccccc-------c---------------------------cccccccccc-------
Confidence 000000000 1 3344555555
Q ss_pred cccccCceeEEEcCCCCcccceEEEEEeC-CC--eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC----
Q psy467 272 VPVSVSRTSLSILPQSPMLCFILTTSSSA-DR--TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG---- 344 (845)
Q Consensus 272 ~~~~~~I~slafSPdg~~~~~~lLatgs~-DG--~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG---- 344 (845)
.++..+. .+ .+.+.|...+.. .+..+........|||||+.|+..+..+
T Consensus 184 ----------------------~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~ 239 (269)
T d2hqsa1 184 ----------------------FMVMVSSNGGQQHIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSV 239 (269)
T ss_dssp ----------------------EEEEEEECSSCEEEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEEEEEETTEEE
T ss_pred ----------------------eeEEEeecCCceeeeEeecccccc--eEeecCccccceEECCCCCEEEEEEcCCCCcE
Confidence 5554443 33 455556555543 2333455678889999999997655432
Q ss_pred EEEEEecCCceEEEecCCCCCeEEEEEcC
Q psy467 345 LKVYGWEPARQYDAQPMGWGKVQDLAVTG 373 (845)
Q Consensus 345 I~IWDl~tgk~l~tl~~h~~~VtsVafSd 373 (845)
|.+++++.+.. ..+....+.+...+||+
T Consensus 240 l~~~~~dg~~~-~~lt~~~g~~~~p~WSP 267 (269)
T d2hqsa1 240 LNLVSTDGRFK-ARLPATDGQVKFPAWSP 267 (269)
T ss_dssp EEEEETTSCCE-EECCCSSSEEEEEEECC
T ss_pred EEEEECCCCCE-EEEeCCCCcEEeEEeCC
Confidence 88899877654 55666677788888874
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.93 E-value=5.2e-07 Score=97.20 Aligned_cols=171 Identities=8% Similarity=0.051 Sum_probs=102.6
Q ss_pred eeeeeEEe-ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-CeeEEEe-cCCCCCeEEEEEcCCCCEEEEEE---
Q psy467 4 KVEKAEDF-MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-SNCIMSL-SGHSTPVESVQFGNGEETLSAGC--- 77 (845)
Q Consensus 4 rlw~l~~L-~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-~~~i~~l-~~h~~~V~sLafSpdg~~LaSgs--- 77 (845)
+++.++.. ..+...+.-|+|++ ++++|+++.. +.+..|.+.. +...... .........++++++++.+....
T Consensus 27 ~l~~~~~~~~~~~~~~s~la~s~-d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~ 104 (365)
T d1jofa_ 27 TCKLIKRTEIPQDEPISWMTFDH-ERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQ 104 (365)
T ss_dssp EEEEEEEEECCTTCCCSEEEECT-TSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSS
T ss_pred eEEEeeeeeccCCCCCCEEEEcC-CCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecC
Confidence 34444332 23455677899999 8888887765 5677887653 3332221 12234456778888887543322
Q ss_pred CCCcEEEEECCC-CcE---------------EEEE-cCCCCCeEEEEEccCCCEEEEEEC-CCeEEEEECCCCceE---E
Q psy467 78 QSGSIKIWNLAV-PTV---------------QRTL-NGHKSSITSVDFHPYGDYLCSGSL-DSFIKLWDLRRKGCI---Y 136 (845)
Q Consensus 78 ~DGtV~VWDl~t-g~~---------------v~~l-~~h~~~V~~lafspdg~~Lasgs~-DG~I~IWDl~t~~~l---~ 136 (845)
..++|..+.+.. +.. .... ......+.++.|+|||+++++++. ...|.+|+......+ .
T Consensus 105 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~ 184 (365)
T d1jofa_ 105 PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVG 184 (365)
T ss_dssp TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEE
T ss_pred CCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeecc
Confidence 245565554422 111 1111 112334789999999999888764 357888876543222 1
Q ss_pred EEc--CCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 137 TYR--GHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 137 ~~~--~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
... ........++|+|+++++++.. .++.|.+ |++.....
T Consensus 185 ~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v-------------~~~~~~~~ 227 (365)
T d1jofa_ 185 SVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICE-------------YVIDPATH 227 (365)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEE-------------EEECTTTC
T ss_pred ceeecCCCCceEEEEECCCCceEEEeccCCCEEEE-------------EEecCCCc
Confidence 221 2345789999999999886655 5678888 88765543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.87 E-value=1.1e-06 Score=91.75 Aligned_cols=230 Identities=13% Similarity=0.099 Sum_probs=149.9
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC--cEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP--TVQR 94 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg--~~v~ 94 (845)
.+..++++| +|+++++...+++|..|+... + ...+......+.+++|+++|+++++...++.+..|+.... ....
T Consensus 29 ~~e~iAv~p-dG~l~vt~~~~~~I~~i~p~g-~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~ 105 (302)
T d2p4oa1 29 FLENLASAP-DGTIFVTNHEVGEIVSITPDG-N-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 105 (302)
T ss_dssp CEEEEEECT-TSCEEEEETTTTEEEEECTTC-C-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CcCCEEECC-CCCEEEEeCCCCEEEEEeCCC-C-EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceee
Confidence 588999999 999999999999999888653 3 3344446678999999999999999888888888877543 2222
Q ss_pred EE-cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC----------CCCCeEEEEEecCCCEEEEEeCC
Q psy467 95 TL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG----------HSKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 95 ~l-~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~----------h~~~V~sLafSPdg~~Lasgs~D 163 (845)
.. .........+++.++++++++.+.++.+..+|...+........ .......+.++. +.++++.+..
T Consensus 106 ~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~~ 184 (302)
T d2p4oa1 106 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTEK 184 (302)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETTT
T ss_pred ccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-CceeeecCCC
Confidence 21 22445688999999999888888889999999887654332211 112345555553 2334444555
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
+.|.. ++......... ...+...
T Consensus 185 ~~i~~-------------~~~~~~~~~~~-----------------~~~~~~~--------------------------- 207 (302)
T d2p4oa1 185 MLLLR-------------IPVDSTDKPGE-----------------PEIFVEQ--------------------------- 207 (302)
T ss_dssp TEEEE-------------EEBCTTSCBCC-----------------CEEEEES---------------------------
T ss_pred CeEEe-------------ccccccccccc-----------------cccccCC---------------------------
Confidence 66655 66554332000 0000000
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE-EEEecCCC
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL-VSTTEKNS 322 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~-l~tl~gh~ 322 (845)
.....+++.++|+ ++++...++.|..|+...... +.......
T Consensus 208 --------------------------------~~pdgia~d~dG~-----l~va~~~~~~V~~i~p~G~~~~~~~~~~~~ 250 (302)
T d2p4oa1 208 --------------------------------TNIDDFAFDVEGN-----LYGATHIYNSVVRIAPDRSTTIIAQAEQGV 250 (302)
T ss_dssp --------------------------------CCCSSEEEBTTCC-----EEEECBTTCCEEEECTTCCEEEEECGGGTC
T ss_pred --------------------------------CCCcceEECCCCC-----EEEEEcCCCcEEEECCCCCEEEEEecCCCC
Confidence 0112355555555 788877889999998764332 33334344
Q ss_pred CCEEEEEE---eCCCCEEEEEeCCC
Q psy467 323 STIRRLTF---SEGGECLLGGDTEG 344 (845)
Q Consensus 323 ~~Vtslaf---SpdG~~Lasgs~DG 344 (845)
...++++| ++|++.|++++..+
T Consensus 251 ~~pt~vafg~~~~D~~~Lyvtt~~g 275 (302)
T d2p4oa1 251 IGSTAVAFGQTEGDCTAIYVVTNGG 275 (302)
T ss_dssp TTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCceEEEEcCCCCCCCEEEEECCCC
Confidence 56899999 67888888776554
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.85 E-value=2.2e-07 Score=95.10 Aligned_cols=150 Identities=9% Similarity=0.011 Sum_probs=97.0
Q ss_pred cEEEEEEecCCCCEEEEE-eCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 17 SVNCLALGKKSGQVLATG-GDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTg-s~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
.-.++++++ +|+++++. +..+.|..++............-......++++++++.+++....+.+++++-.+...+..
T Consensus 15 ~P~~vavd~-dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~ 93 (260)
T d1rwia_ 15 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP 93 (260)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECC
T ss_pred CCCEEEEcC-CCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeee
Confidence 348999998 88866655 4557777776644332222222223457889999999877776666666666555554433
Q ss_pred EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 96 LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 96 l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.. ......++++.++++++++-..+..+..++..................+++++++++.+++...++.|..
T Consensus 94 ~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~ 165 (260)
T d1rwia_ 94 FD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK 165 (260)
T ss_dssp CC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEE
T ss_pred ee-eeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccc
Confidence 33 2345789999999988777666677777776543332222222345678999999998877777777777
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.81 E-value=1.6e-06 Score=91.54 Aligned_cols=251 Identities=6% Similarity=-0.026 Sum_probs=148.1
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeC-------CCeEEEEECCCCeeEEEecCC----CCCeEEEEEcCCCCEEEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGD-------DKKVNLWALGKSNCIMSLSGH----STPVESVQFGNGEETLSAGC 77 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~-------DG~I~IWdl~t~~~i~~l~~h----~~~V~sLafSpdg~~LaSgs 77 (845)
..+...-.....++|.+ +|+++++... +|+|..||..++......... ...-..++|.++++.|+++.
T Consensus 11 ~~v~~~~~g~EGpa~d~-dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad 89 (314)
T d1pjxa_ 11 TKVTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD 89 (314)
T ss_dssp EEEECCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE
T ss_pred EEeecCCCCCeEeEEeC-CCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEE
Confidence 33444444567789999 8987776432 467999998877654433221 23357899999999888887
Q ss_pred CCCcEEEEECCCCcEEEEEcCCCC----CeEEEEEccCCCEEEEEEC---------------CCeEEEEECCCCceEEEE
Q psy467 78 QSGSIKIWNLAVPTVQRTLNGHKS----SITSVDFHPYGDYLCSGSL---------------DSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 78 ~DGtV~VWDl~tg~~v~~l~~h~~----~V~~lafspdg~~Lasgs~---------------DG~I~IWDl~t~~~l~~~ 138 (845)
..+.|...+.+.+..........+ ..+.+++.++|++.++-.. .|.|..++.. ++.....
T Consensus 90 ~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~ 168 (314)
T d1pjxa_ 90 MRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp TTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEee
Confidence 778899999875532221111111 2578999999987776422 2334444432 3333222
Q ss_pred cCCCCCeEEEEEecCCC----EEE-EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEE
Q psy467 139 RGHSKSINSIRFSPDGQ----WIA-SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSF 213 (845)
Q Consensus 139 ~~h~~~V~sLafSPdg~----~La-sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~ 213 (845)
. .-...+.++|+|++. +|+ +-+..+.|.. ||+..... +...
T Consensus 169 ~-~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~-------------~d~~~~g~--------------------~~~~ 214 (314)
T d1pjxa_ 169 T-AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWS-------------YDIKGPAK--------------------IENK 214 (314)
T ss_dssp E-EESSEEEEEEEECTTSCEEEEEEEETTTTEEEE-------------EEEEETTE--------------------EEEE
T ss_pred C-CcceeeeeEECCCCCcceeEEEEEeecccceEE-------------eeccCccc--------------------ccee
Confidence 2 223456788888764 333 3344555655 65432211 1000
Q ss_pred ecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccce
Q psy467 214 TKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFI 293 (845)
Q Consensus 214 ~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~ 293 (845)
.+.....+. .......+++..+|+
T Consensus 215 ------------------------------------------~~~~~~~~~---------~~~~pdGiavD~~Gn----- 238 (314)
T d1pjxa_ 215 ------------------------------------------KVWGHIPGT---------HEGGADGMDFDEDNN----- 238 (314)
T ss_dssp ------------------------------------------EEEEECCCC---------SSCEEEEEEEBTTCC-----
T ss_pred ------------------------------------------eEEEEcccc---------ccccceeeEEecCCc-----
Confidence 000000000 000112455556665
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEE-eCCC-EEEEEec
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEG-LKVYGWE 351 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasg-s~DG-I~IWDl~ 351 (845)
+.++....+.|.+||.+.++.+..+.......++++|.+|++.|+.. +.++ |..+++.
T Consensus 239 lyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 239 LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence 77777788999999998887777776656678999999999866554 4556 6555554
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.77 E-value=2.3e-06 Score=92.01 Aligned_cols=274 Identities=9% Similarity=0.060 Sum_probs=152.5
Q ss_pred EEEEeC--CCeEEEE--ECCCCeeE--EEe-cCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-cEEEEE-cCCCC
Q psy467 31 LATGGD--DKKVNLW--ALGKSNCI--MSL-SGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-TVQRTL-NGHKS 101 (845)
Q Consensus 31 LaTgs~--DG~I~IW--dl~t~~~i--~~l-~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg-~~v~~l-~~h~~ 101 (845)
|++|+. .+.|.++ |.++++.- ... ......+..|+|++++++|.+.. .+.+..|.+... ...... .....
T Consensus 5 l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~-~~~~~~~~i~~~~~~~~~~~~~~~~ 83 (365)
T d1jofa_ 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA-MKKWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE-BTEEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEe-CCcEEEEEEeCCCCeEEEeeecCCC
Confidence 555643 4566554 44555432 221 22455567799999999998875 456788877643 222221 11223
Q ss_pred CeEEEEEccCCCEEEEEE---CCCeEEEEECCC-Cce---------------EEE-EcCCCCCeEEEEEecCCCEEEEEe
Q psy467 102 SITSVDFHPYGDYLCSGS---LDSFIKLWDLRR-KGC---------------IYT-YRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 102 ~V~~lafspdg~~Lasgs---~DG~I~IWDl~t-~~~---------------l~~-~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
....+.++++++.++... ..++|..+.+.. +.. ... -......+.++.|+|||+++++++
T Consensus 84 ~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d 163 (365)
T d1jofa_ 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEee
Confidence 455678888887543322 235555554421 111 111 111233478999999999888876
Q ss_pred C-CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccc
Q psy467 162 E-DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 162 ~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
. ...|.+ |+...... +...
T Consensus 164 ~g~d~v~~-------------~~~~~~g~--------------------~~~~--------------------------- 183 (365)
T d1jofa_ 164 LTANKLWT-------------HRKLASGE--------------------VELV--------------------------- 183 (365)
T ss_dssp TTTTEEEE-------------EEECTTSC--------------------EEEE---------------------------
T ss_pred CCCCEEEE-------------EEccCCCc--------------------eeec---------------------------
Confidence 4 335666 65443222 1110
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe--EEEE-
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS--LVST- 317 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~--~l~t- 317 (845)
......+.+ ...+.++|+|+++. +.++...++.|.+|++...+ .+..
T Consensus 184 --------------~~~~~~~~g------------~gPr~i~f~pdg~~----~yv~~e~~~~V~v~~~~~~~~~~~~~~ 233 (365)
T d1jofa_ 184 --------------GSVDAPDPG------------DHPRWVAMHPTGNY----LYALMEAGNRICEYVIDPATHMPVYTH 233 (365)
T ss_dssp --------------EEEECSSTT------------CCEEEEEECTTSSE----EEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred --------------cceeecCCC------------CceEEEEECCCCce----EEEeccCCCEEEEEEecCCCceEEEEe
Confidence 000000011 12345666666652 44566678999999986653 2222
Q ss_pred --ec--------------CCCCCEEEEEEeCCCCEEEEEeC--C----C-EEEEEecCCceEE------EecCCCCCeEE
Q psy467 318 --TE--------------KNSSTIRRLTFSEGGECLLGGDT--E----G-LKVYGWEPARQYD------AQPMGWGKVQD 368 (845)
Q Consensus 318 --l~--------------gh~~~VtslafSpdG~~Lasgs~--D----G-I~IWDl~tgk~l~------tl~~h~~~Vts 368 (845)
.. .+......+.++|||++|+++.. + . |..|++.....+. .........++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~ 313 (365)
T d1jofa_ 234 HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNA 313 (365)
T ss_dssp EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCC
T ss_pred eeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccE
Confidence 11 01123567899999999988743 2 2 6667665432221 11223456788
Q ss_pred EEEc--CCceEEEE------EEEEeeCCCCCcccc
Q psy467 369 LAVT--GTQLWFRR------VGTWSHQDSGFSTLD 395 (845)
Q Consensus 369 VafS--dg~lLaaS------VsiW~~d~~~~~~~~ 395 (845)
++++ +|++|+++ |.+|..+...+....
T Consensus 314 i~~~p~~G~~l~va~~~s~~v~v~~~~~~~l~~~~ 348 (365)
T d1jofa_ 314 VSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVA 348 (365)
T ss_dssp EEECTTCTTEEEEECSSSCEEEEEEEETTEEEEEE
T ss_pred EEecCCCCCEEEEEeCCCCeEEEEEEeCCcCcEEE
Confidence 9998 68988888 999988776554433
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.76 E-value=5.6e-07 Score=91.91 Aligned_cols=224 Identities=6% Similarity=-0.006 Sum_probs=134.3
Q ss_pred CCeEEEEEcCCCCEEEEE-ECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE
Q psy467 59 TPVESVQFGNGEETLSAG-CQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSg-s~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~ 137 (845)
..-..|+++++|+..++. +..+.+..++...................++++++++.+++....+.+++++-.+...+..
T Consensus 14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~ 93 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP 93 (260)
T ss_dssp CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECC
T ss_pred CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeee
Confidence 345899999999966654 3456777776654432222222223457889999998777766666666665554444433
Q ss_pred EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC
Q psy467 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 138 ~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~ 217 (845)
.. ......+++++++++++++-..+..+.. ++...... ..+..
T Consensus 94 ~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~-------------~~~~~~~~---------------------~~~~~-- 136 (260)
T d1rwia_ 94 FD-GLNYPEGLAVDTQGAVYVADRGNNRVVK-------------LAAGSKTQ---------------------TVLPF-- 136 (260)
T ss_dssp CC-SCCSEEEEEECTTCCEEEEEGGGTEEEE-------------ECTTCSSC---------------------EECCC--
T ss_pred ee-eeeecccccccccceeEeeccccccccc-------------ccccccee---------------------eeeee--
Confidence 32 2345789999998887766555554554 44332221 00000
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS 297 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat 297 (845)
.+ ......+++.++++ ++++
T Consensus 137 --------------------------------------------~~-----------~~~p~~i~~~~~g~-----~~v~ 156 (260)
T d1rwia_ 137 --------------------------------------------TG-----------LNDPDGVAVDNSGN-----VYVT 156 (260)
T ss_dssp --------------------------------------------CS-----------CCSCCEEEECTTCC-----EEEE
T ss_pred --------------------------------------------cc-----------cCCcceeeecCCCC-----Eeee
Confidence 00 01113344455554 7888
Q ss_pred EeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe-cCCCCCeEEEEEc-CC
Q psy467 298 SSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ-PMGWGKVQDLAVT-GT 374 (845)
Q Consensus 298 gs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl-~~h~~~VtsVafS-dg 374 (845)
...++.|..+|...................++++++|.++++...++ |..++..... ...+ ...-....+|+++ +|
T Consensus 157 ~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~-~~~~~~~~~~~P~~i~~d~~g 235 (260)
T d1rwia_ 157 DTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-STVLPFTGLNTPLAVAVDSDR 235 (260)
T ss_dssp EGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC-CEECCCCSCCCEEEEEECTTC
T ss_pred ccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCe-EEEEccCCCCCeEEEEEeCCC
Confidence 88888999999876554433334456678999999998877777777 6666654432 2222 2233568899999 77
Q ss_pred ceEEEE
Q psy467 375 QLWFRR 380 (845)
Q Consensus 375 ~lLaaS 380 (845)
.++++-
T Consensus 236 ~l~vad 241 (260)
T d1rwia_ 236 TVYVAD 241 (260)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 766553
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.75 E-value=5.8e-06 Score=83.11 Aligned_cols=153 Identities=13% Similarity=0.121 Sum_probs=100.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCC---eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC-CCc--
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDK---KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ-SGS-- 81 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG---~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~-DGt-- 81 (845)
.+.+..+...+...+||| ||+.||...... .+.+.+...+.. ..+..+........|+|+|..++.... ++.
T Consensus 31 ~~~l~~~~~~~~sP~wSP-DGk~IAf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~ 108 (269)
T d2hqsa1 31 QFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLN 108 (269)
T ss_dssp CEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred cEEEecCCCceeeeEECC-CCCEEEEEEeeccCcceeeeecccCce-eEEeeeecccccceecCCCCeeeEeeecCCccc
Confidence 356666778899999999 999999765433 466667665554 445557888999999999999887664 333
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
+..+......... ............+++++..++..+ .+| .|.+.++..+.. ..............|+|+++.++
T Consensus 109 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~~~ 186 (269)
T d2hqsa1 109 LYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMV 186 (269)
T ss_dssp EEEEETTTCCEEE-CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEE
T ss_pred eeeccccccccee-eeeccccccccccccccccceecccccCCceEeeeecccccc-eeeecccccccccccccccceeE
Confidence 3333333333333 333444455667888777655443 444 466666665433 33344566677889999999988
Q ss_pred EEeCCC
Q psy467 159 SGGEDG 164 (845)
Q Consensus 159 sgs~DG 164 (845)
..+.++
T Consensus 187 ~~~~~~ 192 (269)
T d2hqsa1 187 MVSSNG 192 (269)
T ss_dssp EEEECS
T ss_pred EEeecC
Confidence 766544
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.73 E-value=7.4e-06 Score=84.22 Aligned_cols=237 Identities=9% Similarity=0.133 Sum_probs=157.5
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC------CCCCeEEEEEcCCCC-EEEEE-ECCCcEEEEECC
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG------HSTPVESVQFGNGEE-TLSAG-CQSGSIKIWNLA 88 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~------h~~~V~sLafSpdg~-~LaSg-s~DGtV~VWDl~ 88 (845)
.-..|++++ +|+++++-..++.|++||.+ ++.+..+.. ....-..+++..+.. .+++. +.++.|.+++..
T Consensus 24 ~P~gvavd~-dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 101 (279)
T d1q7fa_ 24 EPSGVAVNA-QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY 101 (279)
T ss_dssp CEEEEEECT-TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred CccEEEEcC-CCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc
Confidence 468999999 89988887778899999964 677766632 122345666666544 44433 234577777764
Q ss_pred CCcEEEEEc-CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 89 VPTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 89 tg~~v~~l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
+.....+. ........+++.+++..+++....+.+.+++.. ++.+..+. .+......+++.++++.+++....+.
T Consensus 102 -g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~ 179 (279)
T d1q7fa_ 102 -GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 179 (279)
T ss_dssp -SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred -ccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeeccccc
Confidence 66666664 234567889999999988887777888888864 66666653 34556788999999888887777788
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
|.+ ||.. ++. +..+.. ...
T Consensus 180 V~~-------------~d~~-G~~--------------------~~~~g~-~g~-------------------------- 198 (279)
T d1q7fa_ 180 VKV-------------FNYE-GQY--------------------LRQIGG-EGI-------------------------- 198 (279)
T ss_dssp EEE-------------EETT-CCE--------------------EEEESC-TTT--------------------------
T ss_pred eee-------------eecC-Cce--------------------eeeecc-ccc--------------------------
Confidence 888 7753 222 333211 000
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCeEEEEecCC--C
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFSLVSTTEKN--S 322 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~~l~tl~gh--~ 322 (845)
......+++.++|+ ++++-. .++.|.+|+. +++.+.++... .
T Consensus 199 -----------------------------~~~P~giavD~~G~-----i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~ 243 (279)
T d1q7fa_ 199 -----------------------------TNYPIGVGINSNGE-----ILIADNHNNFNLTIFTQ-DGQLISALESKVKH 243 (279)
T ss_dssp -----------------------------SCSEEEEEECTTCC-----EEEEECSSSCEEEEECT-TSCEEEEEEESSCC
T ss_pred -----------------------------ccCCcccccccCCe-----EEEEECCCCcEEEEECC-CCCEEEEEeCCCCC
Confidence 01123344555554 666654 3557999984 57777776532 3
Q ss_pred CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc
Q psy467 323 STIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 323 ~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk 354 (845)
.....+++.+||.+++ ++.++ |++|.+....
T Consensus 244 ~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~~ 275 (279)
T d1q7fa_ 244 AQCFDVALMDDGSVVL-ASKDYRLYIYRYVQLA 275 (279)
T ss_dssp SCEEEEEEETTTEEEE-EETTTEEEEEECSCCC
T ss_pred CCEeEEEEeCCCcEEE-EeCCCeEEEEEeeeec
Confidence 4688999999997555 55677 9999987653
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.72 E-value=8.3e-06 Score=85.79 Aligned_cols=250 Identities=10% Similarity=0.039 Sum_probs=155.5
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC----CCcEEEEEC
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ----SGSIKIWNL 87 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~----DGtV~VWDl 87 (845)
.........++|.+ +|+++++-...+.|..|+.++++....+.........++++++|+++++... .+.+...+.
T Consensus 36 ~~~~~~lEG~~~D~-~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~ 114 (319)
T d2dg1a1 36 SKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 114 (319)
T ss_dssp ESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred ccCCcCcEeCEECC-CCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcC
Confidence 33444567899998 8998888778899999998877766666556677899999999998877543 234555565
Q ss_pred CCCcEEEEEcC--CCCCeEEEEEccCCCEEEEEEC------CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 88 AVPTVQRTLNG--HKSSITSVDFHPYGDYLCSGSL------DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 88 ~tg~~v~~l~~--h~~~V~~lafspdg~~Lasgs~------DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
..+........ .......+++.++|++.++... .+.+..++... ..+..+...-...+.++|+||++.|+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg-~~~~~~~~~~~~pnGia~s~dg~~lyv 193 (319)
T d2dg1a1 115 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF-RTVTPIIQNISVANGIALSTDEKVLWV 193 (319)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS-CCEEEEEEEESSEEEEEECTTSSEEEE
T ss_pred CCceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEeccc-ceeEEEeeccceeeeeeeccccceEEE
Confidence 55554444432 2234778999999986665322 13355555443 333333223345678999999987655
Q ss_pred E-eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 160 G-GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 160 g-s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+ +..+.|.. ||+..... .......
T Consensus 194 ad~~~~~I~~-------------~d~~~~g~-------------------~~~~~~~----------------------- 218 (319)
T d2dg1a1 194 TETTANRLHR-------------IALEDDGV-------------------TIQPFGA----------------------- 218 (319)
T ss_dssp EEGGGTEEEE-------------EEECTTSS-------------------SEEEEEE-----------------------
T ss_pred ecccCCceEE-------------EEEcCCCc-------------------eeccccc-----------------------
Confidence 4 45677777 77653221 0111000
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT 318 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl 318 (845)
.......+. .....+++.++|+ +.++....+.|.+||. .++.+..+
T Consensus 219 -----------------~~~~~~~~~-----------~~PdGl~vD~~G~-----l~Va~~~~g~V~~~~p-~G~~l~~i 264 (319)
T d2dg1a1 219 -----------------TIPYYFTGH-----------EGPDSCCIDSDDN-----LYVAMYGQGRVLVFNK-RGYPIGQI 264 (319)
T ss_dssp -----------------EEEEECCSS-----------SEEEEEEEBTTCC-----EEEEEETTTEEEEECT-TSCEEEEE
T ss_pred -----------------eeeeccCCc-----------cceeeeeEcCCCC-----EEEEEcCCCEEEEECC-CCcEEEEE
Confidence 000000000 0112345555555 7888888999999995 68888777
Q ss_pred c------CCCCCEEEEEEeCCCCEEEEEeCC----C-EEEEEecC
Q psy467 319 E------KNSSTIRRLTFSEGGECLLGGDTE----G-LKVYGWEP 352 (845)
Q Consensus 319 ~------gh~~~VtslafSpdG~~Lasgs~D----G-I~IWDl~t 352 (845)
. ++...+++++|.+++..+++.+.+ + -.||-++.
T Consensus 265 ~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~l~~~~~ 309 (319)
T d2dg1a1 265 LIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 309 (319)
T ss_dssp ECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred eCCCcCCCcCceeeeEEEeCCCCEEEEEcCCCCcCCceeEEEEeC
Confidence 5 334468899999988777665432 2 45555543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.71 E-value=1.9e-06 Score=89.87 Aligned_cols=241 Identities=12% Similarity=0.069 Sum_probs=149.4
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEE
Q psy467 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 49 ~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWD 128 (845)
+.+..+.. ...+..++++|||+++++...+++|..|+... +. ..+......+.+++|+++|+++++...++.+..|+
T Consensus 19 ~v~~~~p~-~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g-~~-~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~ 95 (302)
T d2p4oa1 19 KIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQ-QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVS 95 (302)
T ss_dssp EEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTC-CE-EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred cEEEECCC-CCCcCCEEECCCCCEEEEeCCCCEEEEEeCCC-CE-EEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEE
Confidence 34445542 23588999999999999988899998888663 33 33334567799999999999988888888888887
Q ss_pred CCCCc-eEEEE--cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecC
Q psy467 129 LRRKG-CIYTY--RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSH 205 (845)
Q Consensus 129 l~t~~-~l~~~--~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~sp 205 (845)
..... ....+ .........+++.++++++++.+.++.+.. +|...+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~-------------~~~~~~~~---------------- 146 (302)
T d2p4oa1 96 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWL-------------IDVVQPSG---------------- 146 (302)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEE-------------EETTTTEE----------------
T ss_pred ecccccceeeccccCCccccceeEEccCCCEEeecccccccee-------------eeccCCcc----------------
Confidence 64322 11122 124456889999999998888777887777 77665443
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
.......... . . ...........+++..
T Consensus 147 ----~~~~~~~~~~-------~--------------------------------------~---~~~~~~~~~ngi~~~~ 174 (302)
T d2p4oa1 147 ----SIWLEHPMLA-------R--------------------------------------S---NSESVFPAANGLKRFG 174 (302)
T ss_dssp ----EEEEECGGGS-------C--------------------------------------S---STTCCSCSEEEEEEET
T ss_pred ----eeEecCCccc-------e--------------------------------------e---eccCcccccccccccC
Confidence 1111000000 0 0 0000001112233322
Q ss_pred CCCcccceEEEEEeCCCeEEEEECCCCeEE---EEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc-eEEEec
Q psy467 286 QSPMLCFILTTSSSADRTVNFWDLEKFSLV---STTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR-QYDAQP 360 (845)
Q Consensus 286 dg~~~~~~lLatgs~DG~I~IWDl~s~~~l---~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk-~l~tl~ 360 (845)
+ . ++++.+..+.|+.++....... ..+. .......++++++|.+.++...++ |..++.+... .+....
T Consensus 175 ~-~-----l~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~ 247 (302)
T d2p4oa1 175 N-F-----LYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAE 247 (302)
T ss_dssp T-E-----EEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGG
T ss_pred C-c-----eeeecCCCCeEEecccccccccccccccc-CCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecC
Confidence 2 1 6677778889998887653221 1111 123456799999999777777777 7777654322 123334
Q ss_pred CCCCCeEEEEE---c-CCceEEEE
Q psy467 361 MGWGKVQDLAV---T-GTQLWFRR 380 (845)
Q Consensus 361 ~h~~~VtsVaf---S-dg~lLaaS 380 (845)
..-...++++| + |++.|.++
T Consensus 248 ~~~~~pt~vafg~~~~D~~~Lyvt 271 (302)
T d2p4oa1 248 QGVIGSTAVAFGQTEGDCTAIYVV 271 (302)
T ss_dssp GTCTTEEEEEECCSTTTTTEEEEE
T ss_pred CCCCCceEEEEcCCCCCCCEEEEE
Confidence 44567899999 4 67766554
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=2.3e-06 Score=95.30 Aligned_cols=297 Identities=10% Similarity=-0.009 Sum_probs=162.5
Q ss_pred cEEEEEEecCCCCEEEEEe---------CCCeEEEEECCCCeeEEEe--cCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 17 SVNCLALGKKSGQVLATGG---------DDKKVNLWALGKSNCIMSL--SGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs---------~DG~I~IWdl~t~~~i~~l--~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
.+....||| ++++++.+. ..+.+.++|+.++...... ......+....|||||+.||... ++.|.+.
T Consensus 62 ~~~~~~~Sp-D~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~ 139 (465)
T d1xfda1 62 RAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYC 139 (465)
T ss_dssp TCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEE
T ss_pred ccceeEECC-CCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEE
Confidence 677888999 899888764 3567899999887654332 22344566789999999998874 7789999
Q ss_pred ECCCCcEEEEEc-CCCCCe-----------------EEEEEccCCCEEEEEECC-Ce-----------------------
Q psy467 86 NLAVPTVQRTLN-GHKSSI-----------------TSVDFHPYGDYLCSGSLD-SF----------------------- 123 (845)
Q Consensus 86 Dl~tg~~v~~l~-~h~~~V-----------------~~lafspdg~~Lasgs~D-G~----------------------- 123 (845)
+..++..++... +....| ..+.|||||++||....| ..
T Consensus 140 ~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp 219 (465)
T d1xfda1 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (465)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeecc
Confidence 888776555443 222212 467899999999876422 22
Q ss_pred ----------EEEEECCCCceEEEEc------CCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCC
Q psy467 124 ----------IKLWDLRRKGCIYTYR------GHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSL 186 (845)
Q Consensus 124 ----------I~IWDl~t~~~l~~~~------~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~t 186 (845)
+.++|+.++....... ....-+..+.|++++++++... .+... ..+.++|..+
T Consensus 220 ~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~----------~~i~~~d~~t 289 (465)
T d1xfda1 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNV----------SILTLCDATT 289 (465)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCE----------EEEEEEETTT
T ss_pred ccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEcccccc----------ceEEEEcCCC
Confidence 3344443332211111 0111256678888887554432 22221 1244588887
Q ss_pred CccCCCCC---CCC----CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEE
Q psy467 187 VHPLGTPP---PQY----TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIF 259 (845)
Q Consensus 187 g~~l~~~~---~~~----i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~f 259 (845)
++...... ..+ .....|+++|+.+..+......+... + ..+.+
T Consensus 290 g~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~---l---------------------------y~~~~ 339 (465)
T d1xfda1 290 GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGK---F---------------------------YHITV 339 (465)
T ss_dssp CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSC---E---------------------------EEEEE
T ss_pred CcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCc---e---------------------------EEEEe
Confidence 76532211 112 23456778887554322111110000 1 11111
Q ss_pred cC-----CCCcCCCCcccccccCcee-EEEcCCCCcccceEEEEEeCCC--eEEEE--ECCCCeEEEEec---CCCCCEE
Q psy467 260 QP-----HRSLNRSGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSADR--TVNFW--DLEKFSLVSTTE---KNSSTIR 326 (845)
Q Consensus 260 sp-----dg~~~~~~~~~~~~~~I~s-lafSPdg~~~~~~lLatgs~DG--~I~IW--Dl~s~~~l~tl~---gh~~~Vt 326 (845)
.. .+. ...........|.. ++|..+++. +.+++..++ .-++| ++........+. .......
T Consensus 340 ~~~~~~~~~~--~~~~LT~G~w~V~~i~~~d~~~~~----vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~ 413 (465)
T d1xfda1 340 SSSQPNSSND--NIQSITSGDWDVTKILAYDEKGNK----IYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYF 413 (465)
T ss_dssp ECSSCCSSSC--CCCBSCCSSSCEEEEEEEETTTTE----EEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCC
T ss_pred ccccccCCCc--eeEEeccCCceEEEEEEEcCCCCE----EEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEE
Confidence 10 010 00001111233444 357777663 334444332 33344 444332222221 2344577
Q ss_pred EEEEeCCCCEEEEEeCC--C--EEEEEecCCceEEEecC
Q psy467 327 RLTFSEGGECLLGGDTE--G--LKVYGWEPARQYDAQPM 361 (845)
Q Consensus 327 slafSpdG~~Lasgs~D--G--I~IWDl~tgk~l~tl~~ 361 (845)
.+.|||+|++++....+ - +.+++..+++.+..+..
T Consensus 414 ~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~Le~ 452 (465)
T d1xfda1 414 SASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLET 452 (465)
T ss_dssp EEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEEEEC
T ss_pred EEEECCCCCEEEEEeecCCCCeEEEEECCCCCEEEEEcC
Confidence 99999999998855443 2 88898888888877753
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.66 E-value=6.2e-06 Score=86.79 Aligned_cols=253 Identities=11% Similarity=0.087 Sum_probs=145.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEEC-------CCcEEEEECCCCcEEEEEcCC----CCCeEEEEEccCCCEEEEEECCCeEE
Q psy467 57 HSTPVESVQFGNGEETLSAGCQ-------SGSIKIWNLAVPTVQRTLNGH----KSSITSVDFHPYGDYLCSGSLDSFIK 125 (845)
Q Consensus 57 h~~~V~sLafSpdg~~LaSgs~-------DGtV~VWDl~tg~~v~~l~~h----~~~V~~lafspdg~~Lasgs~DG~I~ 125 (845)
.-.....++|.++|+..++... +|.|..||..++......... .+.-..++|.++++.+++++..+.|.
T Consensus 16 ~~~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~ 95 (314)
T d1pjxa_ 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLL 95 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEE
T ss_pred CCCCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEE
Confidence 3345678899999997776432 467999999887654433211 22356899999999888888878888
Q ss_pred EEECCCCceEEEEcCCCC----CeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcce
Q psy467 126 LWDLRRKGCIYTYRGHSK----SINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSV 201 (845)
Q Consensus 126 IWDl~t~~~l~~~~~h~~----~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~sv 201 (845)
.+|..............+ ..+.++++++|++.++-.. +.... |+...... ...-.-.
T Consensus 96 ~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~-~~~~~-------------~~~~~~~~-----~~~G~v~ 156 (314)
T d1pjxa_ 96 VVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPA-GEVAP-------------ADYTRSMQ-----EKFGSIY 156 (314)
T ss_dssp EEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECB-CBCTT-------------SCCCBTTS-----SSCEEEE
T ss_pred EEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCc-cCccc-------------ccccceec-----cCCceEE
Confidence 899765432221111111 3567888888876655322 11111 11110000 0000001
Q ss_pred eecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeE
Q psy467 202 PFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSL 281 (845)
Q Consensus 202 s~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sl 281 (845)
.+.++++....... ....+.+
T Consensus 157 ~~~~dg~~~~~~~~-----------------------------------------------------------~~~pNGi 177 (314)
T d1pjxa_ 157 CFTTDGQMIQVDTA-----------------------------------------------------------FQFPNGI 177 (314)
T ss_dssp EECTTSCEEEEEEE-----------------------------------------------------------ESSEEEE
T ss_pred EEeecCceeEeeCC-----------------------------------------------------------cceeeee
Confidence 11222221111100 0111344
Q ss_pred EEcCCCCcccceEEEEEeCCCeEEEEECCCC-eE-----EEEecC-CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 282 SILPQSPMLCFILTTSSSADRTVNFWDLEKF-SL-----VSTTEK-NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 282 afSPdg~~~~~~lLatgs~DG~I~IWDl~s~-~~-----l~tl~g-h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+|+|++......++++-+..+.|+.||+... .. ...+.+ +......+++..+|++.++....+ |.+||-+.+
T Consensus 178 ~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g 257 (314)
T d1pjxa_ 178 AVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp EEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred EECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCC
Confidence 5555432111115556667888999987543 22 122222 223456899999999877776677 999998888
Q ss_pred ceEEEecCCCCCeEEEEEc-CCceEEEE----EEEEeeC
Q psy467 354 RQYDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQ 387 (845)
Q Consensus 354 k~l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d 387 (845)
+.+..+......+++++|. +++.|.++ -.+|..+
T Consensus 258 ~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~ 296 (314)
T d1pjxa_ 258 QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 8777777777889999999 77755554 3666554
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.56 E-value=6.6e-05 Score=76.84 Aligned_cols=228 Identities=11% Similarity=0.100 Sum_probs=146.5
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCC------CCCeEEEEEccCCC-EEEEE-ECCCeEEEEECCC
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGH------KSSITSVDFHPYGD-YLCSG-SLDSFIKLWDLRR 131 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h------~~~V~~lafspdg~-~Lasg-s~DG~I~IWDl~t 131 (845)
....|+++++++.+++-...+.|++||.+ |+.+..+... ...-..+++..+.. .+++. +.++.|..++. .
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~ 101 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-Y 101 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-T
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc-c
Confidence 46899999999988877778899999976 7777776421 11234566655543 44433 34457777775 4
Q ss_pred CceEEEEcC-CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeE
Q psy467 132 KGCIYTYRG-HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR 210 (845)
Q Consensus 132 ~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l 210 (845)
+.....+.. .......+++.++|+++++....+.+.+ ++. +++.+
T Consensus 102 g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~-------------~~~---------------------~g~~~ 147 (279)
T d1q7fa_ 102 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVII-------------FDQ---------------------NGNVL 147 (279)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEE-------------ECT---------------------TSCEE
T ss_pred ccceeecCCCcccccceeccccCCcEEEEeeccceeeE-------------ecc---------------------CCcee
Confidence 666666632 3455678888888877766655555555 442 23324
Q ss_pred EEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcc
Q psy467 211 KSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPML 290 (845)
Q Consensus 211 ~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~ 290 (845)
..+...... .....+++.++++
T Consensus 148 ~~~g~~~~~--------------------------------------------------------~~~~~i~~d~~g~-- 169 (279)
T d1q7fa_ 148 HKFGCSKHL--------------------------------------------------------EFPNGVVVNDKQE-- 169 (279)
T ss_dssp EEEECTTTC--------------------------------------------------------SSEEEEEECSSSE--
T ss_pred ecccccccc--------------------------------------------------------cccceeeecccee--
Confidence 433211111 1122333444443
Q ss_pred cceEEEEEeCCCeEEEEECCCCeEEEEec--CCCCCEEEEEEeCCCCEEEEEeCC-C-EEEEEecCCceEEEecC--CCC
Q psy467 291 CFILTTSSSADRTVNFWDLEKFSLVSTTE--KNSSTIRRLTFSEGGECLLGGDTE-G-LKVYGWEPARQYDAQPM--GWG 364 (845)
Q Consensus 291 ~~~lLatgs~DG~I~IWDl~s~~~l~tl~--gh~~~VtslafSpdG~~Lasgs~D-G-I~IWDl~tgk~l~tl~~--h~~ 364 (845)
++++....+.|++||.. ++.+.++. ++......++++++|+++++-..+ . |.+|+ .+|+.+.++.. ...
T Consensus 170 ---i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~ 244 (279)
T d1q7fa_ 170 ---IFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHA 244 (279)
T ss_dssp ---EEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCS
T ss_pred ---EEeeeccccceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCC
Confidence 78888888999999975 56666664 344568899999999977765544 4 88888 46787777643 335
Q ss_pred CeEEEEEc-CCceEEEE----EEEEee
Q psy467 365 KVQDLAVT-GTQLWFRR----VGTWSH 386 (845)
Q Consensus 365 ~VtsVafS-dg~lLaaS----VsiW~~ 386 (845)
..++|++. +|.++++. |.+|..
T Consensus 245 ~p~~vav~~dG~l~V~~~n~~v~~fr~ 271 (279)
T d1q7fa_ 245 QCFDVALMDDGSVVLASKDYRLYIYRY 271 (279)
T ss_dssp CEEEEEEETTTEEEEEETTTEEEEEEC
T ss_pred CEeEEEEeCCCcEEEEeCCCeEEEEEe
Confidence 68899999 88876665 777643
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.55 E-value=6.5e-05 Score=78.68 Aligned_cols=236 Identities=10% Similarity=0.043 Sum_probs=140.6
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC----CCeEEEEEC
Q psy467 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL----DSFIKLWDL 129 (845)
Q Consensus 54 l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~----DG~I~IWDl 129 (845)
+......+..++|.++|++.++-...+.|..|+.+++.....+.........+++++||+++++... .+.|...+.
T Consensus 35 ~~~~~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~ 114 (319)
T d2dg1a1 35 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 114 (319)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred eccCCcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcC
Confidence 3434556789999999997777767899999999887766666556667889999999987776543 234555555
Q ss_pred CCCceEEEEcC--CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCC
Q psy467 130 RRKGCIYTYRG--HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNT 207 (845)
Q Consensus 130 ~t~~~l~~~~~--h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg 207 (845)
........... ....+..+++.++|++.++........ ..+.+..++ +++
T Consensus 115 ~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~-------~~g~v~~~~---------------------~dg 166 (319)
T d2dg1a1 115 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN-------PLGGVYYVS---------------------PDF 166 (319)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB-------CCEEEEEEC---------------------TTS
T ss_pred CCceeeeeccCCCcccCCcceeEEeccceeeccccccccc-------CcceeEEEe---------------------ccc
Confidence 55444433322 233567788888887555432110000 000011111 111
Q ss_pred CeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCC
Q psy467 208 SLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQS 287 (845)
Q Consensus 208 ~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg 287 (845)
..+..+... ....+.++|+||+
T Consensus 167 ~~~~~~~~~----------------------------------------------------------~~~pnGia~s~dg 188 (319)
T d2dg1a1 167 RTVTPIIQN----------------------------------------------------------ISVANGIALSTDE 188 (319)
T ss_dssp CCEEEEEEE----------------------------------------------------------ESSEEEEEECTTS
T ss_pred ceeEEEeec----------------------------------------------------------cceeeeeeecccc
Confidence 111111000 0112345666666
Q ss_pred CcccceEEEEEeCCCeEEEEECCCC-e---EEE----EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEE
Q psy467 288 PMLCFILTTSSSADRTVNFWDLEKF-S---LVS----TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDA 358 (845)
Q Consensus 288 ~~~~~~lLatgs~DG~I~IWDl~s~-~---~l~----tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~t 358 (845)
+. ++++-+..+.|+.||+... . ... ...........++++.+|++.++...++ |.+|+ ..|+.+..
T Consensus 189 ~~----lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~-p~G~~l~~ 263 (319)
T d2dg1a1 189 KV----LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN-KRGYPIGQ 263 (319)
T ss_dssp SE----EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC-TTSCEEEE
T ss_pred ce----EEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEEC-CCCcEEEE
Confidence 52 4566667889999997532 1 111 1111123356899999999877777777 99999 47888877
Q ss_pred ec------CCCCCeEEEEEc-CCceEEEE
Q psy467 359 QP------MGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 359 l~------~h~~~VtsVafS-dg~lLaaS 380 (845)
+. ++...+++++|. ++..+.++
T Consensus 264 i~~P~~~~~~~~~~~~~~~~~~~~~~~~t 292 (319)
T d2dg1a1 264 ILIPGRDEGHMLRSTHPQFIPGTNQLIIC 292 (319)
T ss_dssp EECTTGGGTCSCBCCEEEECTTSCEEEEE
T ss_pred EeCCCcCCCcCceeeeEEEeCCCCEEEEE
Confidence 64 344568899998 44444433
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.54 E-value=3.8e-06 Score=93.47 Aligned_cols=138 Identities=14% Similarity=0.108 Sum_probs=96.7
Q ss_pred EEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCC---CCCeEEEEEcCCCCEEEEEEC---------CCcEEEEECC
Q psy467 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGH---STPVESVQFGNGEETLSAGCQ---------SGSIKIWNLA 88 (845)
Q Consensus 21 LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h---~~~V~sLafSpdg~~LaSgs~---------DGtV~VWDl~ 88 (845)
..|.+ ++.++. -..+|.|.+||+.+++....+..+ ...+....||||+++++.... .+.+.++|+.
T Consensus 22 ~~W~~-~~~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~ 99 (465)
T d1xfda1 22 AKWIS-DTEFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP 99 (465)
T ss_dssp CCBSS-SSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred CEEeC-CCcEEE-EeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEcc
Confidence 36777 666554 356789999999887765444432 346778889999999887643 4678999999
Q ss_pred CCcEEEEEc--CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-CCCC-----------------eEEE
Q psy467 89 VPTVQRTLN--GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKS-----------------INSI 148 (845)
Q Consensus 89 tg~~v~~l~--~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~~~-----------------V~sL 148 (845)
++....... .....+....|||||+.+|-.. ++.|.+.+..++..++.... .... -.++
T Consensus 100 ~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~ 178 (465)
T d1xfda1 100 HGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAH 178 (465)
T ss_dssp SCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEE
T ss_pred CCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceE
Confidence 887543322 2344566789999999988776 67788888877665544332 1111 2467
Q ss_pred EEecCCCEEEEEe
Q psy467 149 RFSPDGQWIASGG 161 (845)
Q Consensus 149 afSPdg~~Lasgs 161 (845)
.|||||++||...
T Consensus 179 ~WSPDgk~iaf~~ 191 (465)
T d1xfda1 179 WWSPDGTRLAYAA 191 (465)
T ss_dssp EECTTSSEEEEEE
T ss_pred EECCCCCeEEEEE
Confidence 8999999998765
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.32 E-value=0.00043 Score=71.51 Aligned_cols=229 Identities=12% Similarity=0.017 Sum_probs=144.0
Q ss_pred EEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC
Q psy467 19 NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 19 ~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~ 98 (845)
-+..|++.++.++.+--..+.|..||..+++.. .+. ....+.++++.++|.+++++ . ..|.++|..+++.......
T Consensus 21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va~-~-~gl~~~d~~tg~~~~l~~~ 96 (295)
T d2ghsa1 21 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAEL 96 (295)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECS
T ss_pred eCCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEEEE-e-CccEEeecccceeeEEeee
Confidence 467788756667666667789999999887653 232 35678999999998777654 4 4689999998876544331
Q ss_pred C----CCCeEEEEEccCCCEEEEEEC----CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE-eCCCcEEEe
Q psy467 99 H----KSSITSVDFHPYGDYLCSGSL----DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG-GEDGVVRIG 169 (845)
Q Consensus 99 h----~~~V~~lafspdg~~Lasgs~----DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg-s~DG~I~I~ 169 (845)
. ...++.+.+.|+|++.++... .+.-.+|.+..++...... .-...+.++|+++++.++.+ +..+.|..
T Consensus 97 ~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~-~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~- 174 (295)
T d2ghsa1 97 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMR- 174 (295)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-EESSEEEEEECTTSCEEEEEETTTCEEEE-
T ss_pred ecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee-ccCCcceeeecCCCceEEEeecccceeeE-
Confidence 1 124788999999987665432 2345667666665544443 23346789999999876554 44566666
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
|++........ ... ....
T Consensus 175 ------------~~~d~~~~~~~-------------~~~-~~~~------------------------------------ 192 (295)
T d2ghsa1 175 ------------VPLDARTGLPT-------------GKA-EVFI------------------------------------ 192 (295)
T ss_dssp ------------EEBCTTTCCBS-------------SCC-EEEE------------------------------------
T ss_pred ------------eeecccccccc-------------cce-EEEe------------------------------------
Confidence 66543221000 000 0000
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLT 329 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtsla 329 (845)
...+. ......+++..+|+ +.++.-..+.|..||. +++.+..+.-....+++++
T Consensus 193 ----------~~~~~----------~g~pdG~~vD~~Gn-----lWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~ 246 (295)
T d2ghsa1 193 ----------DSTGI----------KGGMDGSVCDAEGH-----IWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPA 246 (295)
T ss_dssp ----------ECTTS----------SSEEEEEEECTTSC-----EEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEE
T ss_pred ----------ccCcc----------cccccceEEcCCCC-----EEeeeeCCCceEEecC-CCcEeeEecCCCCceEEEE
Confidence 00000 01123344555554 6777667889999995 5888888876556799999
Q ss_pred Ee-CCCCEEEEEe
Q psy467 330 FS-EGGECLLGGD 341 (845)
Q Consensus 330 fS-pdG~~Lasgs 341 (845)
|- +|.+.|++.+
T Consensus 247 FGG~d~~~LyvTt 259 (295)
T d2ghsa1 247 FIGPDASRLLVTS 259 (295)
T ss_dssp EESTTSCEEEEEE
T ss_pred EeCCCCCEEEEEE
Confidence 96 6777665443
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.25 E-value=3.9e-05 Score=76.82 Aligned_cols=95 Identities=12% Similarity=0.147 Sum_probs=67.8
Q ss_pred EEecCC--CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC-C-----CcEEEEECCCCcEE
Q psy467 22 ALGKKS--GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ-S-----GSIKIWNLAVPTVQ 93 (845)
Q Consensus 22 afSp~d--g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~-D-----GtV~VWDl~tg~~v 93 (845)
..|| + |+.+|..+ +|.|.+.|+.+++. +.+..+...+...+|||||+.||.... + ..|.+++..+++..
T Consensus 5 ~~sP-di~G~~v~f~~-~~dl~~~d~~~g~~-~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~ 81 (281)
T d1k32a2 5 LLNP-DIHGDRIIFVC-CDDLWEHDLKSGST-RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK 81 (281)
T ss_dssp CEEE-EEETTEEEEEE-TTEEEEEETTTCCE-EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred ccCC-CCCCCEEEEEe-CCcEEEEECCCCCE-EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceE
Confidence 4578 7 88888765 45788889987775 456667788999999999999986543 2 24777888877654
Q ss_pred EEEc------CCCCCeEEEEEccCCCEEEEEE
Q psy467 94 RTLN------GHKSSITSVDFHPYGDYLCSGS 119 (845)
Q Consensus 94 ~~l~------~h~~~V~~lafspdg~~Lasgs 119 (845)
.... ..........|+|+|+.|+...
T Consensus 82 ~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 113 (281)
T d1k32a2 82 RITYFSGKSTGRRMFTDVAGFDPDGNLIISTD 113 (281)
T ss_dssp ECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred EeeecCCCccCccccccccccCCCCCEEEEEE
Confidence 3221 1122456789999999888754
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.22 E-value=0.00097 Score=68.71 Aligned_cols=218 Identities=11% Similarity=-0.039 Sum_probs=134.6
Q ss_pred EEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC
Q psy467 62 ESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 62 ~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~ 140 (845)
.+..|++....|.... ..+.|..||.++++.. .+. ....+.++++.++|.++++ +.+ .|.++|..+++.......
T Consensus 21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~~ 96 (295)
T d2ghsa1 21 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAEL 96 (295)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEECS
T ss_pred eCCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEeee
Confidence 4567887555554443 5788999999987643 333 3456889999999876654 554 588999988875443321
Q ss_pred ----CCCCeEEEEEecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE
Q psy467 141 ----HSKSINSIRFSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS 212 (845)
Q Consensus 141 ----h~~~V~sLafSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~ 212 (845)
....++.+.+.|+|++.++..... .-.+ |.+..++. ...
T Consensus 97 ~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l-------------~~~~~g~~--------------------~~~ 143 (295)
T d2ghsa1 97 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSI-------------YHVAKGKV--------------------TKL 143 (295)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEE-------------EEEETTEE--------------------EEE
T ss_pred ecCCCcccceeeEECCCCCEEEEeccccccccceeE-------------eeecCCcE--------------------EEE
Confidence 122467888888888655542211 1111 22222221 111
Q ss_pred EecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccc
Q psy467 213 FTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCF 292 (845)
Q Consensus 213 ~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~ 292 (845)
.... ...+.++|+++++.
T Consensus 144 ~~~~-----------------------------------------------------------~~~Ng~~~s~d~~~--- 161 (295)
T d2ghsa1 144 FADI-----------------------------------------------------------SIPNSICFSPDGTT--- 161 (295)
T ss_dssp EEEE-----------------------------------------------------------SSEEEEEECTTSCE---
T ss_pred eecc-----------------------------------------------------------CCcceeeecCCCce---
Confidence 1000 01134455555542
Q ss_pred eEEEEEeCCCeEEEEECCCC--------eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCC
Q psy467 293 ILTTSSSADRTVNFWDLEKF--------SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGW 363 (845)
Q Consensus 293 ~lLatgs~DG~I~IWDl~s~--------~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~ 363 (845)
++++.+..+.|+.|++... .....+.+..+....++++.+|.+.++.-..+ |..|| ..|+.+..+....
T Consensus 162 -l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d-p~G~~~~~i~lP~ 239 (295)
T d2ghsa1 162 -GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD-TDGNHIARYEVPG 239 (295)
T ss_dssp -EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC-TTCCEEEEEECSC
T ss_pred -EEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEec-CCCcEeeEecCCC
Confidence 5566667788999886421 12223334455688999999998777666666 99999 5788888888767
Q ss_pred CCeEEEEEc--CCceEEEE
Q psy467 364 GKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 364 ~~VtsVafS--dg~lLaaS 380 (845)
..+++++|- |.+.|.++
T Consensus 240 ~~~T~~~FGG~d~~~LyvT 258 (295)
T d2ghsa1 240 KQTTCPAFIGPDASRLLVT 258 (295)
T ss_dssp SBEEEEEEESTTSCEEEEE
T ss_pred CceEEEEEeCCCCCEEEEE
Confidence 789999997 55555443
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.76 E-value=0.0025 Score=63.00 Aligned_cols=99 Identities=18% Similarity=0.098 Sum_probs=65.2
Q ss_pred EEccC--CCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEE
Q psy467 107 DFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVD 183 (845)
Q Consensus 107 afspd--g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWD 183 (845)
..+|| |+.++..+ +|.|.+.|+.+++. ..+..+.+.+...+|||||++||.... ++.... ..+++++
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~-~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~--------~~i~~~~ 74 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGST-RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNT--------ADLYFYN 74 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTCCE-EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCE--------EEEEEEE
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCCCE-EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCc--------eEEEEEE
Confidence 45788 99887665 56799999987765 456667778899999999999886542 221110 1233377
Q ss_pred CCCCccCCCCC--------CCCCcceeecCCCCeEEEEec
Q psy467 184 LSLVHPLGTPP--------PQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 184 l~tg~~l~~~~--------~~~i~svs~spdg~~l~~~~~ 215 (845)
..+++...... ........|+|+|+.+.....
T Consensus 75 ~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 114 (281)
T d1k32a2 75 GENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDA 114 (281)
T ss_dssp TTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECT
T ss_pred ecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEc
Confidence 77776533211 123456789999998775443
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.54 E-value=0.056 Score=54.07 Aligned_cols=158 Identities=9% Similarity=-0.039 Sum_probs=101.3
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCC
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAV 89 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~t 89 (845)
+..+...|.+|+|...++.++.+-..++.|+..++........+......+.++++..-+..|..+. ..+.|.+.+++.
T Consensus 31 ~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg 110 (263)
T d1npea_ 31 LHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (263)
T ss_dssp EEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCC
Confidence 3344456888999883444444445667898888876655555544446789999987666666554 467999999986
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCCEEEEEECC---CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCc
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD---SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGV 165 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~~Lasgs~D---G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~ 165 (845)
......+.........++++|...+++..... +.|..-++............-....++++++.++.|..+. ..+.
T Consensus 111 ~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~ 190 (263)
T d1npea_ 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (263)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCE
Confidence 55444444444668899999988777755432 2354456654333333333345678899988777665553 4456
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
|..
T Consensus 191 I~~ 193 (263)
T d1npea_ 191 AEC 193 (263)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.53 E-value=0.028 Score=60.11 Aligned_cols=290 Identities=12% Similarity=0.147 Sum_probs=164.3
Q ss_pred EEEEeCCCeEEEEECCCCeeEEEecCC---------------------------------------CCCe--EEEEEcC-
Q psy467 31 LATGGDDKKVNLWALGKSNCIMSLSGH---------------------------------------STPV--ESVQFGN- 68 (845)
Q Consensus 31 LaTgs~DG~I~IWdl~t~~~i~~l~~h---------------------------------------~~~V--~sLafSp- 68 (845)
+.+|+..|.|+|+-+.+++.++.+.-. .+.. -.+.+..
T Consensus 16 f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~TdG 95 (459)
T d1fwxa2 16 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 95 (459)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEETT
T ss_pred EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccCC
Confidence 557888999999999888877766310 0011 1344443
Q ss_pred --CCCEEEEEEC-CCcEEEEECCCCcEEEEEcC-CCCCeEEEEEccC--CCEEEEEECC------------------CeE
Q psy467 69 --GEETLSAGCQ-SGSIKIWNLAVPTVQRTLNG-HKSSITSVDFHPY--GDYLCSGSLD------------------SFI 124 (845)
Q Consensus 69 --dg~~LaSgs~-DGtV~VWDl~tg~~v~~l~~-h~~~V~~lafspd--g~~Lasgs~D------------------G~I 124 (845)
||++|++... ++.|.+.|+++.++.+.+.. ....+..++..++ ..|++.++.+ +.+
T Consensus 96 tyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~ 175 (459)
T d1fwxa2 96 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 175 (459)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEE
T ss_pred ccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEE
Confidence 7888888764 78999999999988664432 3445677777554 4577776653 236
Q ss_pred EEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc--EEEeeeeccCCceeEEEECCCCccCCCCCCCCCccee
Q psy467 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV--VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~--I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs 202 (845)
.++|..+.+....... .+....++++++|+++++.+.+.. +.+-+.-......+.+++.... ..
T Consensus 176 t~ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~ri-------------e~ 241 (459)
T d1fwxa2 176 TAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI-------------EK 241 (459)
T ss_dssp EEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH-------------HH
T ss_pred EEEecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHh-------------HH
Confidence 7889998888777653 345778999999999888774321 1110000000111222332211 11
Q ss_pred ecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE
Q psy467 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282 (845)
Q Consensus 203 ~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla 282 (845)
+.++|+... +. . +.+.+.... .+. ..+. .+++......+.
T Consensus 242 av~~Gk~~e-in----g-----V~VVD~~~~----------------~~~--~v~~------------yIPVpKsPHGV~ 281 (459)
T d1fwxa2 242 AIAAGDYQE-LN----G-----VKVVDGRKE----------------ASS--LFTR------------YIPIANNPHGCN 281 (459)
T ss_dssp HHHHTCSEE-ET----T-----EEEEECSGG------------------C--SSEE------------EEEEESSCCCEE
T ss_pred hhhcCCcEE-eC----C-----ceeeccccc----------------CCc--ceeE------------EEecCCCCCceE
Confidence 112222110 00 0 001000000 000 0111 223334556788
Q ss_pred EcCCCCcccceEEEEEeCCCeEEEEECCCC------------eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 283 ILPQSPMLCFILTTSSSADRTVNFWDLEKF------------SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 283 fSPdg~~~~~~lLatgs~DG~I~IWDl~s~------------~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
++|||++ ++++|.-+.++.++|+++. ....... ..-.-..-+|+..|..-.+---|. |.-|+
T Consensus 282 vSPDGKy----i~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~e-lglgPLht~fd~~g~aytslfids~v~kw~ 356 (459)
T d1fwxa2 282 MAPDKKH----LCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWN 356 (459)
T ss_dssp ECTTSSE----EEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred ECCCCCE----EEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecc-cCcCccccccCCCceEEEEeeccceEEEEe
Confidence 9999984 5666677899999998642 1111211 233467788998886555556788 99999
Q ss_pred ecCC----------ceEEEecCCCCCeEEEEEc-------CCceEEEE
Q psy467 350 WEPA----------RQYDAQPMGWGKVQDLAVT-------GTQLWFRR 380 (845)
Q Consensus 350 l~tg----------k~l~tl~~h~~~VtsVafS-------dg~lLaaS 380 (845)
++.. ..+..+..|.. +-.+..+ +|++|++-
T Consensus 357 ~~~~~~~~~~~~~~~v~~k~~v~y~-~gh~~~~~g~t~~~dgk~l~~~ 403 (459)
T d1fwxa2 357 IEDAIRAYAGEKVDPIKDKLDVHYQ-PGHLKTVMGETLDATNDWLVCL 403 (459)
T ss_dssp HHHHHHHHHTCSCCCEEEEEECSSC-EEEEEETTTTSTTCCSSEEEEE
T ss_pred cchhhhhhccccCCcceeccccccC-CCCCccCcCCcCCCCCCEEEEe
Confidence 8643 44566665543 3333332 67777643
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.39 E-value=0.029 Score=62.84 Aligned_cols=148 Identities=10% Similarity=0.115 Sum_probs=92.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCC----CCeEEEEEcCCCCEEEEEEC------CCcEEEEECCCCcEEEEEcC
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHS----TPVESVQFGNGEETLSAGCQ------SGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~----~~V~sLafSpdg~~LaSgs~------DGtV~VWDl~tg~~v~~l~~ 98 (845)
..++.++.||.+.-.|.++|+.+....-.. ..++.--.-.+ ..++.+.. .|.|.-+|+.+|+.+.++..
T Consensus 116 ~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~-~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t 194 (571)
T d2ad6a1 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeC-CeEEEeeccccccccCcEEEEECCCCcEEEEEec
Confidence 467778889999999999999877654211 11111101113 34444442 67899999999999987642
Q ss_pred CC-------------------------------------CCe-EEEEEccCCCEEEEEEC----------------CCeE
Q psy467 99 HK-------------------------------------SSI-TSVDFHPYGDYLCSGSL----------------DSFI 124 (845)
Q Consensus 99 h~-------------------------------------~~V-~~lafspdg~~Lasgs~----------------DG~I 124 (845)
.. ..+ ...++.+....++.+.. ...+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~sv 274 (571)
T d2ad6a1 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred cCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccce
Confidence 21 111 22455666666665543 3468
Q ss_pred EEEECCCCceEEEEcCCCCCeEE---------EEEecCCC---EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 125 KLWDLRRKGCIYTYRGHSKSINS---------IRFSPDGQ---WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~h~~~V~s---------LafSPdg~---~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
...|+++++.+..+......++. ..+..+++ .++.++.+|.+.+ +|..+|+.+
T Consensus 275 vAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~v-------------lDr~tG~~i 339 (571)
T d2ad6a1 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYT-------------LNRENGNLI 339 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEE-------------EETTTCCEE
T ss_pred eeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEE-------------EecCCCcEe
Confidence 88899999999888754333322 22222443 3566777788877 898888873
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=97.27 E-value=0.033 Score=62.78 Aligned_cols=150 Identities=10% Similarity=0.101 Sum_probs=93.6
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCe-EEEEEcC--CCCEEEEEEC------CCcEEEEECCCCcEEEEEcC
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPV-ESVQFGN--GEETLSAGCQ------SGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V-~sLafSp--dg~~LaSgs~------DGtV~VWDl~tg~~v~~l~~ 98 (845)
+.+++.++.|+.|.-.|..+|+.+..+....... ..+.-+| .+..++.+.. .|.|+-+|+.+|+.+.++..
T Consensus 121 ~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t 200 (596)
T d1w6sa_ 121 PALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (596)
T ss_dssp CCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ceEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeec
Confidence 3478888999999999999999988775221100 0011111 1345555543 48899999999999987642
Q ss_pred CC-------------------------------------CCe-EEEEEccCCCEEEEEEC----------------CCeE
Q psy467 99 HK-------------------------------------SSI-TSVDFHPYGDYLCSGSL----------------DSFI 124 (845)
Q Consensus 99 h~-------------------------------------~~V-~~lafspdg~~Lasgs~----------------DG~I 124 (845)
.. ..+ ..+++.+....++.+.. ...|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~si 280 (596)
T d1w6sa_ 201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (596)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred cCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccc
Confidence 11 011 23455666666665532 2458
Q ss_pred EEEECCCCceEEEEcCCCCCeE---------EEEE-ecCCC---EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 125 KLWDLRRKGCIYTYRGHSKSIN---------SIRF-SPDGQ---WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~h~~~V~---------sLaf-SPdg~---~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
...|+++++.+..+......++ .+.. ..+|+ .++....+|.+.+ +|..+|+.+
T Consensus 281 vAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~v-------------lDr~tG~~i 346 (596)
T d1w6sa_ 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYT-------------LDRTDGALV 346 (596)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEE-------------EETTTCCEE
T ss_pred cccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceee-------------ecCCCCcee
Confidence 8899999999887764322222 1221 22343 4666777888888 999988873
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.14 E-value=0.17 Score=51.29 Aligned_cols=125 Identities=11% Similarity=0.210 Sum_probs=86.2
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-cEEEEEcC
Q psy467 20 CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-TVQRTLNG 98 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg-~~v~~l~~ 98 (845)
+.-.+| ....||.-+ ..+++|+|+++.+.++.+. ....|.--.|-.+ +.|+.. .+..|.-|+++.. .+.+.+..
T Consensus 67 sAIMhP-~~~IiALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~-~~L~lV-T~taVYHW~~~g~s~P~k~fdR 141 (327)
T d1utca2 67 SAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISL-NTVALV-TDNAVYHWSMEGESQPVKMFDR 141 (327)
T ss_dssp EEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCCCEEEESSS-SEEEEE-CSSEEEEEESSSSCCCEEEEEC
T ss_pred hhhcCC-CCcEEEEec-CCeEEEEehhHhhhhceEE-cCCCcEEEEecCC-CEEEEE-cCCceEEEcccCCCCchhhhhh
Confidence 445677 778888766 4589999999999998887 4456766777644 556655 3678999999543 46666654
Q ss_pred CC----CCeEEEEEccCCCEEEEEE-------CCCeEEEEECCCCceEEEEcCCCCCeEEEEE
Q psy467 99 HK----SSITSVDFHPYGDYLCSGS-------LDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150 (845)
Q Consensus 99 h~----~~V~~lafspdg~~Lasgs-------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLaf 150 (845)
|. ..|..-..++++++++..+ -.|.+.+|..+. +.-+.+.+|......+.+
T Consensus 142 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~ 203 (327)
T d1utca2 142 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKM 203 (327)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECC
T ss_pred cccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEecc-CcCccccceeeeeEEEEc
Confidence 43 4566777788889876543 236788999874 455667777554444433
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.10 E-value=0.018 Score=61.64 Aligned_cols=94 Identities=11% Similarity=0.071 Sum_probs=68.8
Q ss_pred CCCEEEEEe-CCCeEEEEECCCCeeEEEecC-CCCCeEEEEEc--CCCCEEEEEECC------------------CcEEE
Q psy467 27 SGQVLATGG-DDKKVNLWALGKSNCIMSLSG-HSTPVESVQFG--NGEETLSAGCQS------------------GSIKI 84 (845)
Q Consensus 27 dg~~LaTgs-~DG~I~IWdl~t~~~i~~l~~-h~~~V~sLafS--pdg~~LaSgs~D------------------GtV~V 84 (845)
||++|++.. .+++|.+.|+.+.++.+.+.- ....+..++.. |+..|++.++.. +.+.+
T Consensus 98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ 177 (459)
T d1fwxa2 98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 177 (459)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEE
T ss_pred ceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEE
Confidence 577887765 678999999999988664432 34566777765 456688877652 23678
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D 121 (845)
+|.++.+....+.. .+....++++++|+++++.+.+
T Consensus 178 ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyN 213 (459)
T d1fwxa2 178 VDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYN 213 (459)
T ss_dssp EETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESC
T ss_pred EecCCceEEEEeee-CCChhccccCCCCCEEEEEecc
Confidence 99999988777753 3456789999999999887743
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.01 E-value=0.23 Score=50.34 Aligned_cols=240 Identities=10% Similarity=0.129 Sum_probs=144.3
Q ss_pred CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE
Q psy467 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC 116 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La 116 (845)
...+.|.|+.++....+-.- .-.+.-.+|..+.||.-+ ..++.++|+++.+.++.+.- ..+|.--.|-.+. .|+
T Consensus 44 ~~~VvIidl~n~~~~~Rrpi---~AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~ 117 (327)
T d1utca2 44 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVA 117 (327)
T ss_dssp EEEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEESSSS-EEE
T ss_pred CceEEEEECCCCCcceeccc---chhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEc-CCCcEEEEecCCC-EEE
Confidence 34788899876654332221 122344678888888775 66899999999999988874 4467777887554 555
Q ss_pred EEECCCeEEEEECCC-CceEEEEcCC----CCCeEEEEEecCCCEEEEEe---CCCcEEEeeeeccCCceeEEEECCCCc
Q psy467 117 SGSLDSFIKLWDLRR-KGCIYTYRGH----SKSINSIRFSPDGQWIASGG---EDGVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 117 sgs~DG~I~IWDl~t-~~~l~~~~~h----~~~V~sLafSPdg~~Lasgs---~DG~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
..+ +..|+-|+++. ..+...+..| ...|.....+++.+|++..+ .++.| .|.+.+|..+...
T Consensus 118 lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i---------~G~mQLYS~er~~ 187 (327)
T d1utca2 118 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV---------VGAMQLYSVDRKV 187 (327)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEE---------EEEEEEEETTTTE
T ss_pred EEc-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCce---------eEEEEEEEeccCc
Confidence 554 45799999953 2455555544 34688888899999977654 33322 1445558776544
Q ss_pred cCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCC
Q psy467 189 PLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268 (845)
Q Consensus 189 ~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~ 268 (845)
. ..+.+|... . ..+..+|..
T Consensus 188 s---------------------Q~ieGhaa~-------F-----------------------------~~~~~~g~~--- 207 (327)
T d1utca2 188 S---------------------QPIEGHAAS-------F-----------------------------AQFKMEGNA--- 207 (327)
T ss_dssp E---------------------EEECCSEEE-------E-----------------------------EEECCTTCS---
T ss_pred C---------------------ccccceeee-------e-----------------------------EEEEcCCCC---
Confidence 3 344444332 1 111111110
Q ss_pred CcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC--------eEEEEe-c---CCCCCEEEEEEeCCCCE
Q psy467 269 GTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF--------SLVSTT-E---KNSSTIRRLTFSEGGEC 336 (845)
Q Consensus 269 ~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~--------~~l~tl-~---gh~~~VtslafSpdG~~ 336 (845)
.+..-++|.. -+...+.++|.++... +....+ - ...+--.++..|+.-..
T Consensus 208 -------~~~~lf~fa~-----------r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygi 269 (327)
T d1utca2 208 -------EESTLFCFAV-----------RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 269 (327)
T ss_dssp -------SCEEEEEEEE-----------EETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTE
T ss_pred -------CCceEEEEEE-----------CCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCE
Confidence 0000111110 0112357788877541 111111 1 12445678899998889
Q ss_pred EEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEE
Q psy467 337 LLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLA 370 (845)
Q Consensus 337 Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVa 370 (845)
+..-+.-| |++||++++.++..-+-..+.|..-+
T Consensus 270 iyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a 304 (327)
T d1utca2 270 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTA 304 (327)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEEEecCcEEEEEEcccccEEEEeecCCCceEEec
Confidence 99999999 99999999999876665556655333
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=96.91 E-value=0.073 Score=54.98 Aligned_cols=110 Identities=10% Similarity=0.074 Sum_probs=73.0
Q ss_pred cCCCCEEEEEeCCC-----------eEEEEECCCCeeE--EE-ecCCCCCeEEEEEcCCCCEEEEEECC-CcEEEEECCC
Q psy467 25 KKSGQVLATGGDDK-----------KVNLWALGKSNCI--MS-LSGHSTPVESVQFGNGEETLSAGCQS-GSIKIWNLAV 89 (845)
Q Consensus 25 p~dg~~LaTgs~DG-----------~I~IWdl~t~~~i--~~-l~~h~~~V~sLafSpdg~~LaSgs~D-GtV~VWDl~t 89 (845)
+.+|++++.|+.+. .+.+||..++.-. .. ...|.......++.+++.+++.|+.+ ..+.+||..+
T Consensus 28 ~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~ 107 (387)
T d1k3ia3 28 PTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS 107 (387)
T ss_dssp TTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGG
T ss_pred eeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCcc
Confidence 44889999888421 3779999876432 22 22344444566788999999988765 6899999988
Q ss_pred CcEEEEEcC-CCCCeEEEEEccCCCEEEEEECC------CeEEEEECCCCce
Q psy467 90 PTVQRTLNG-HKSSITSVDFHPYGDYLCSGSLD------SFIKLWDLRRKGC 134 (845)
Q Consensus 90 g~~v~~l~~-h~~~V~~lafspdg~~Lasgs~D------G~I~IWDl~t~~~ 134 (845)
......-.. ....-...+..+||+.++.|+.+ ..+.+||..+.+-
T Consensus 108 ~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W 159 (387)
T d1k3ia3 108 DSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 159 (387)
T ss_dssp TEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred CcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCce
Confidence 754332111 11223466778899998888753 3689999987653
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.89 E-value=0.43 Score=52.96 Aligned_cols=79 Identities=11% Similarity=0.098 Sum_probs=54.6
Q ss_pred CCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCC-eEEEEEc-CC-ce
Q psy467 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGK-VQDLAVT-GT-QL 376 (845)
Q Consensus 301 DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~-VtsVafS-dg-~l 376 (845)
.|.|.-+|+.+++.+.....+ .++..-..+..|.++++|+.|+ ++-+|.++|+.+-.+...... -.-+.+. +| ++
T Consensus 465 ~G~l~AiD~~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qY 543 (582)
T d1flga_ 465 VGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CCeEEEEcCCCCcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEE
Confidence 367888999999988887643 2222222345677888999999 999999999999777643321 1225555 66 56
Q ss_pred EEEE
Q psy467 377 WFRR 380 (845)
Q Consensus 377 LaaS 380 (845)
|++.
T Consensus 544 v~i~ 547 (582)
T d1flga_ 544 LGVT 547 (582)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=96.72 E-value=0.25 Score=54.81 Aligned_cols=78 Identities=18% Similarity=0.190 Sum_probs=52.6
Q ss_pred CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeE-EEEEc-CCc-eE
Q psy467 302 RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQ-DLAVT-GTQ-LW 377 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~Vt-sVafS-dg~-lL 377 (845)
|.+.-||+.+++.+.+..... +...-..+-.|.+|++|+.|+ ++.+|.++|+.+-.+....+... =+.|. +|+ +|
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~-p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv 535 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ccEEEeCCCCCceEeeecCCC-CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEE
Confidence 578889999999988876432 222222344677899999999 99999999999977654332111 14455 665 55
Q ss_pred EEE
Q psy467 378 FRR 380 (845)
Q Consensus 378 aaS 380 (845)
++.
T Consensus 536 ~v~ 538 (573)
T d1kb0a2 536 SVA 538 (573)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.70 E-value=0.35 Score=47.92 Aligned_cols=131 Identities=11% Similarity=-0.029 Sum_probs=84.2
Q ss_pred CEEEEEeCCCeEEEEECCCCe-----eEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEEEcCCCCC
Q psy467 29 QVLATGGDDKKVNLWALGKSN-----CIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRTLNGHKSS 102 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~-----~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~l~~h~~~ 102 (845)
.+|+.+.. +.|+-.+++... ....+..+...+..++|....+.|.... .++.|...+++.......+......
T Consensus 2 ~fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~ 80 (263)
T d1npea_ 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (263)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred CEEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEecccc
Confidence 34444433 367666664332 1122333344578899998888777664 4677888898866655555544456
Q ss_pred eEEEEEccCCCEEEEE-ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 103 ITSVDFHPYGDYLCSG-SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 103 V~~lafspdg~~Lasg-s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
+.++++..-+..|+.+ ...+.|.+.++........+...-..+..++++|...+++..
T Consensus 81 p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t 139 (263)
T d1npea_ 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWT 139 (263)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred ccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEe
Confidence 8899998766666655 456789999987655433344344678899999877666544
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=96.67 E-value=0.2 Score=55.77 Aligned_cols=102 Identities=10% Similarity=-0.019 Sum_probs=68.1
Q ss_pred CCeEEEEECCCCeeEEEecCC-------------------------------------CCCe-EEEEEcCCCCEEEEEEC
Q psy467 37 DKKVNLWALGKSNCIMSLSGH-------------------------------------STPV-ESVQFGNGEETLSAGCQ 78 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h-------------------------------------~~~V-~sLafSpdg~~LaSgs~ 78 (845)
+|.|+-+|..+|+.+.++... ...+ ...++.+....+..+..
T Consensus 175 ~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg 254 (571)
T d2ad6a1 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred cCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecc
Confidence 678999999999998876421 1112 22455666666665543
Q ss_pred ----------------CCcEEEEECCCCcEEEEEcCCCCCe---------EEEEEccCCC---EEEEEECCCeEEEEECC
Q psy467 79 ----------------SGSIKIWNLAVPTVQRTLNGHKSSI---------TSVDFHPYGD---YLCSGSLDSFIKLWDLR 130 (845)
Q Consensus 79 ----------------DGtV~VWDl~tg~~v~~l~~h~~~V---------~~lafspdg~---~Lasgs~DG~I~IWDl~ 130 (845)
...+.-.|.++|+.+..++.....+ .......+++ .++.++.+|.+.++|..
T Consensus 255 ~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~ 334 (571)
T d2ad6a1 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRE 334 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETT
T ss_pred cccCccccccccccccccceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecC
Confidence 3467888999999998886432222 2222333443 46778899999999999
Q ss_pred CCceEEEE
Q psy467 131 RKGCIYTY 138 (845)
Q Consensus 131 t~~~l~~~ 138 (845)
+++.+...
T Consensus 335 tG~~i~~~ 342 (571)
T d2ad6a1 335 NGNLIVAE 342 (571)
T ss_dssp TCCEEEEE
T ss_pred CCcEeeee
Confidence 99987543
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.58 E-value=0.36 Score=51.20 Aligned_cols=102 Identities=14% Similarity=0.151 Sum_probs=65.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEEC-C----CcEEEEECCCCcEEE-EEcCCCCCeEEEEEccCCCEEEEEECC---------
Q psy467 57 HSTPVESVQFGNGEETLSAGCQ-S----GSIKIWNLAVPTVQR-TLNGHKSSITSVDFHPYGDYLCSGSLD--------- 121 (845)
Q Consensus 57 h~~~V~sLafSpdg~~LaSgs~-D----GtV~VWDl~tg~~v~-~l~~h~~~V~~lafspdg~~Lasgs~D--------- 121 (845)
+.-.+...++||+++++|.+-. + ..|++.|+.+++.+. .+.. .....++|++|++.|+....+
T Consensus 123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~ 200 (430)
T d1qfma1 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (430)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc--ccccceEEcCCCCEEEEEEeccccCccccc
Confidence 3334556788999999885432 3 469999999998764 2321 112468999999988755432
Q ss_pred -------CeEEEEECCCCce--EEEEcCC--CCCeEEEEEecCCCEEEEE
Q psy467 122 -------SFIKLWDLRRKGC--IYTYRGH--SKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 122 -------G~I~IWDl~t~~~--l~~~~~h--~~~V~sLafSPdg~~Lasg 160 (845)
..|..|.+.+... ...+... ...+..+..+.++++++..
T Consensus 201 ~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~ 250 (430)
T d1qfma1 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLS 250 (430)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEE
T ss_pred ccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEE
Confidence 2578888866432 2333332 2345667788888887644
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=96.53 E-value=0.33 Score=53.61 Aligned_cols=78 Identities=14% Similarity=0.110 Sum_probs=51.9
Q ss_pred CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCC-eEEEEEc-CC-ceE
Q psy467 302 RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGK-VQDLAVT-GT-QLW 377 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~-VtsVafS-dg-~lL 377 (845)
|.+.-||+.+++.+...... .+...-.++-.|.++++|+.|+ ++.+|.++|+.+-.+...... -.-+.+. +| ++|
T Consensus 438 G~l~A~D~~tGk~~W~~~~~-~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv 516 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYV 516 (560)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cceEEEeCCCCeEeeeccCC-CCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEE
Confidence 57888999999988876632 2222222344567888999999 999999999999776543321 1124455 66 465
Q ss_pred EEE
Q psy467 378 FRR 380 (845)
Q Consensus 378 aaS 380 (845)
++.
T Consensus 517 ~v~ 519 (560)
T d1kv9a2 517 AIM 519 (560)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.44 E-value=0.52 Score=46.64 Aligned_cols=130 Identities=8% Similarity=-0.004 Sum_probs=82.8
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCc----EEEEEcCCCCCeE
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPT----VQRTLNGHKSSIT 104 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~----~v~~l~~h~~~V~ 104 (845)
+|+.+.. ..|+-.++.+.+....+. ....+..++|++..+.|.... ..+.|.-.++.... ....+......+.
T Consensus 3 fLl~s~~-~~I~~~~l~~~~~~~~~~-~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~ 80 (266)
T d1ijqa1 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (266)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCCcceeeeC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcc
Confidence 3444443 358888987665444444 455678999999888877765 35667766665321 2222333345577
Q ss_pred EEEEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 105 SVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 105 ~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
.+++.+.+..|+.+. ..+.|.+.++..................++++|...+|....
T Consensus 81 glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~ 138 (266)
T d1ijqa1 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 138 (266)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred eEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEec
Confidence 889887676666554 557899999986665555555566788999998666555443
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.32 E-value=0.6 Score=46.15 Aligned_cols=158 Identities=8% Similarity=-0.026 Sum_probs=98.6
Q ss_pred EeccCCCcEEEEEEecCCCCEEE-EEeCCCeEEEEECCCCe----eEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEE
Q psy467 10 DFMAHGASVNCLALGKKSGQVLA-TGGDDKKVNLWALGKSN----CIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIK 83 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~La-Tgs~DG~I~IWdl~t~~----~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~ 83 (845)
.+......+.+++|++ ..+.|. +-..++.|.-.++.... ....+......+..+++.+.+..|..+. ..+.|.
T Consensus 24 ~~~~~~~~~~~id~d~-~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~ 102 (266)
T d1ijqa1 24 SLIPNLRNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 102 (266)
T ss_dssp EEECSCSSEEEEEEET-TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred eeeCCCCceEEEEEEe-CCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEE
Confidence 3444556788999988 445444 44456677766664321 1222333345677899987666666654 467899
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE--CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE-
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS--LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG- 160 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs--~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg- 160 (845)
+.+++.......+.........++++|...+|+... ..+.|.-.++............-....++++++.++.|..+
T Consensus 103 v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d 182 (266)
T d1ijqa1 103 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD 182 (266)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred eEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEec
Confidence 999987665555555556688999999776666554 33467777775443333333334567889999877766655
Q ss_pred eCCCcEEE
Q psy467 161 GEDGVVRI 168 (845)
Q Consensus 161 s~DG~I~I 168 (845)
...+.|..
T Consensus 183 ~~~~~I~~ 190 (266)
T d1ijqa1 183 SKLHSISS 190 (266)
T ss_dssp TTTTEEEE
T ss_pred CCcCEEEE
Confidence 34456666
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.30 E-value=0.77 Score=48.48 Aligned_cols=102 Identities=8% Similarity=0.079 Sum_probs=66.1
Q ss_pred CCCcEEEEEEecCCCCEEEEEe-CC----CeEEEEECCCCeeEEE-ecCCCCCeEEEEEcCCCCEEEEEECC--------
Q psy467 14 HGASVNCLALGKKSGQVLATGG-DD----KKVNLWALGKSNCIMS-LSGHSTPVESVQFGNGEETLSAGCQS-------- 79 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs-~D----G~I~IWdl~t~~~i~~-l~~h~~~V~sLafSpdg~~LaSgs~D-------- 79 (845)
+.-.+..+++|| +++++|.+- .. ..|+++|+.+++.+.. +.. .....++|++|++.|+....+
T Consensus 123 ~~~~~~~~~~Sp-d~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~ 199 (430)
T d1qfma1 123 GTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (430)
T ss_dssp SCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred ccceecceEecC-CCCEEEEEeccccCchheeEEeccCcceeccccccc--ccccceEEcCCCCEEEEEEeccccCcccc
Confidence 333456778899 888888652 22 3699999999987642 221 122568899999988765432
Q ss_pred --------CcEEEEECCCCc--EEEEEcCC--CCCeEEEEEccCCCEEEEE
Q psy467 80 --------GSIKIWNLAVPT--VQRTLNGH--KSSITSVDFHPYGDYLCSG 118 (845)
Q Consensus 80 --------GtV~VWDl~tg~--~v~~l~~h--~~~V~~lafspdg~~Lasg 118 (845)
..|..|.+.+.. .+..+... ...+..+..+.++++++..
T Consensus 200 ~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~ 250 (430)
T d1qfma1 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLS 250 (430)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEE
T ss_pred cccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEE
Confidence 258888887652 23333332 2346677789999987654
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=95.68 E-value=0.47 Score=52.33 Aligned_cols=102 Identities=12% Similarity=0.046 Sum_probs=65.5
Q ss_pred CeEEEEECCCCeeEEEecCC------------------------------CCCeE-EEEEcCCCCEEEEEEC--------
Q psy467 38 KKVNLWALGKSNCIMSLSGH------------------------------STPVE-SVQFGNGEETLSAGCQ-------- 78 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h------------------------------~~~V~-sLafSpdg~~LaSgs~-------- 78 (845)
|.|.-+|..+|+.+.++..- ...++ .+++.+...++..+..
T Consensus 178 G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~ 257 (560)
T d1kv9a2 178 GFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNRE 257 (560)
T ss_dssp CEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHH
T ss_pred ceEEEEECCCceEEeeeeeccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccc
Confidence 67999999999998877421 01111 2455666666554321
Q ss_pred -----------CCcEEEEECCCCcEEEEEcCCCCCeE---------EEEEccCC---CEEEEEECCCeEEEEECCCCceE
Q psy467 79 -----------SGSIKIWNLAVPTVQRTLNGHKSSIT---------SVDFHPYG---DYLCSGSLDSFIKLWDLRRKGCI 135 (845)
Q Consensus 79 -----------DGtV~VWDl~tg~~v~~l~~h~~~V~---------~lafspdg---~~Lasgs~DG~I~IWDl~t~~~l 135 (845)
...|.-.|+++++.+..++.....+. -+....++ ..++.++.+|.+.++|..+++++
T Consensus 258 ~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i 337 (560)
T d1kv9a2 258 VRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (560)
T ss_dssp HHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cccccCCccccceeeEEecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCccc
Confidence 24577779999998877754332221 12222344 35677889999999999999987
Q ss_pred EEEc
Q psy467 136 YTYR 139 (845)
Q Consensus 136 ~~~~ 139 (845)
....
T Consensus 338 ~~~~ 341 (560)
T d1kv9a2 338 SAEK 341 (560)
T ss_dssp EEEE
T ss_pred cccc
Confidence 6543
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=95.52 E-value=1.5 Score=48.54 Aligned_cols=102 Identities=6% Similarity=0.002 Sum_probs=66.9
Q ss_pred CCeEEEEECCCCeeEEEecCCC-------------------------------------CCe-EEEEEcCCCCEEEEEEC
Q psy467 37 DKKVNLWALGKSNCIMSLSGHS-------------------------------------TPV-ESVQFGNGEETLSAGCQ 78 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h~-------------------------------------~~V-~sLafSpdg~~LaSgs~ 78 (845)
.|.|+-+|..+|+.+.++.... ..+ ..+++.+....+..+..
T Consensus 181 ~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg 260 (596)
T d1w6sa_ 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (596)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred cCceEEEECCCCcEEEEeeccCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccc
Confidence 4889999999999998764210 111 23455666666665532
Q ss_pred ----------------CCcEEEEECCCCcEEEEEcCCCC---------CeEEEEE-ccCC---CEEEEEECCCeEEEEEC
Q psy467 79 ----------------SGSIKIWNLAVPTVQRTLNGHKS---------SITSVDF-HPYG---DYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 79 ----------------DGtV~VWDl~tg~~v~~l~~h~~---------~V~~laf-spdg---~~Lasgs~DG~I~IWDl 129 (845)
...|.-.|+++|+.+..++.... ....+.. ..+| +.++.++.+|.+.++|.
T Consensus 261 ~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr 340 (596)
T d1w6sa_ 261 NPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 340 (596)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEET
T ss_pred cccccccccccccccccccccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecC
Confidence 24588889999999887763221 1222222 2344 36778889999999999
Q ss_pred CCCceEEEE
Q psy467 130 RRKGCIYTY 138 (845)
Q Consensus 130 ~t~~~l~~~ 138 (845)
.+++++...
T Consensus 341 ~tG~~i~~~ 349 (596)
T d1w6sa_ 341 TDGALVSAN 349 (596)
T ss_dssp TTCCEEEEE
T ss_pred CCCceeeec
Confidence 999987654
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.54 E-value=1 Score=49.68 Aligned_cols=48 Identities=17% Similarity=0.121 Sum_probs=35.2
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCC-CEEEEEEeCCCC-EEEEEe
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSS-TIRRLTFSEGGE-CLLGGD 341 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~-~VtslafSpdG~-~Lasgs 341 (845)
++++|+.||.++-||.++|+.+..++-... .-.-+.|..+|+ ||++..
T Consensus 499 lVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv~i~a 548 (582)
T d1flga_ 499 LVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEEe
Confidence 788899999999999999999998874221 112256677885 665544
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=93.46 E-value=0.42 Score=52.92 Aligned_cols=76 Identities=9% Similarity=0.198 Sum_probs=52.1
Q ss_pred CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCe-EEEEEecCCCE
Q psy467 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI-NSIRFSPDGQW 156 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V-~sLafSPdg~~ 156 (845)
|.+.-||+.+++.+.+..... +...=..+-.+.++++|+.||.++.+|.++|+.+.++....... .-+.|..||+.
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~-p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQ 533 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQ 533 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ccEEEeCCCCCceEeeecCCC-CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence 457888999999888775322 22211223357788899999999999999999999987432211 12556667863
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.24 E-value=0.94 Score=43.94 Aligned_cols=52 Identities=13% Similarity=0.144 Sum_probs=28.0
Q ss_pred eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC------EEEEEecCCc
Q psy467 303 TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG------LKVYGWEPAR 354 (845)
Q Consensus 303 ~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG------I~IWDl~tgk 354 (845)
....||..+.+....-........+.+...++++++.|+.++ |.+||+.+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 269 (288)
T d1zgka1 212 SVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT 269 (288)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ceeeeeecceeeecccCccCcccceEEEEECCEEEEEecCCCCeecceEEEEECCCCE
Confidence 567788777654332111111111122233678888876543 7788888753
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=93.03 E-value=2.7 Score=42.84 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=39.3
Q ss_pred CCEEEEEEeCCCCEEEEEeCCC--EEEEEecCCceEEEe--cCCCCCeEEEEEc--CCceEEEE
Q psy467 323 STIRRLTFSEGGECLLGGDTEG--LKVYGWEPARQYDAQ--PMGWGKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 323 ~~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk~l~tl--~~h~~~VtsVafS--dg~lLaaS 380 (845)
...+.++++||+++|+++...+ |++|+++....+... ..-.+..-.+.+. +|.+++++
T Consensus 206 ~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~ 269 (340)
T d1v04a_ 206 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 269 (340)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred CccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence 4689999999999988876655 999999765433211 1133556778885 56665554
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=89.17 E-value=13 Score=37.76 Aligned_cols=98 Identities=12% Similarity=0.302 Sum_probs=58.6
Q ss_pred CCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc----CC--CEEEEEE-C-C--CeEEEEECC-CCceEE
Q psy467 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP----YG--DYLCSGS-L-D--SFIKLWDLR-RKGCIY 136 (845)
Q Consensus 68 pdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp----dg--~~Lasgs-~-D--G~I~IWDl~-t~~~l~ 136 (845)
|+..+++.....+-|.+||++ |+.+..+. .+.+..+..-. .+ .-+++++ . + .+|.+|.+. ....+.
T Consensus 38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~ 114 (353)
T d1h6la_ 38 PQNSKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (353)
T ss_dssp GGGCEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEE
T ss_pred cCccEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccccc
Confidence 455677777777779999996 88887775 34566665442 22 2345554 2 2 368888774 233444
Q ss_pred EEcCC-------CCCeEEEEE--ecC-CC-EEEEEeCCCcEEE
Q psy467 137 TYRGH-------SKSINSIRF--SPD-GQ-WIASGGEDGVVRI 168 (845)
Q Consensus 137 ~~~~h-------~~~V~sLaf--SPd-g~-~Lasgs~DG~I~I 168 (845)
.+... ...+..+|+ ++. |. ++++...+|.+..
T Consensus 115 ~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q 157 (353)
T d1h6la_ 115 SITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQ 157 (353)
T ss_dssp ECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEE
T ss_pred cccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEE
Confidence 44321 123566666 554 44 4566667888777
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.11 E-value=9.6 Score=39.28 Aligned_cols=137 Identities=13% Similarity=0.029 Sum_probs=88.3
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECC-----------CCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALG-----------KSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~-----------t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
...+-++.++ ...+++.|+.++ +.|-... ......... -..|..++|+.+ .|+.. .++.+..
T Consensus 37 ~~~~LLAVsn-~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~--ip~v~~vafs~d--~l~v~-~~~~l~~ 109 (381)
T d1xipa_ 37 ASLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE--IPDVIFVCFHGD--QVLVS-TRNALYS 109 (381)
T ss_dssp SCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE--CTTEEEEEEETT--EEEEE-ESSEEEE
T ss_pred cccceEEEeC-CCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccC--CCCeEEEEeeCC--EEEEE-eCCCEEE
Confidence 4677889988 666788787774 6676531 111111111 236899999754 45554 4667888
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc-----CCCCCeEEEEEecCCCEEEE
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-----GHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-----~h~~~V~sLafSPdg~~Las 159 (845)
++..+-...........++..+.++|. .++....+|.+.++++..+....... .-.+.+.+++|++.|..+++
T Consensus 110 ~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~ 187 (381)
T d1xipa_ 110 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFA 187 (381)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEE
T ss_pred EEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEE
Confidence 888765444444444567888888774 56777788999999998775432221 12356778888877777777
Q ss_pred Ee
Q psy467 160 GG 161 (845)
Q Consensus 160 gs 161 (845)
+.
T Consensus 188 ~~ 189 (381)
T d1xipa_ 188 WR 189 (381)
T ss_dssp EE
T ss_pred eC
Confidence 64
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=87.20 E-value=17 Score=36.82 Aligned_cols=138 Identities=9% Similarity=0.178 Sum_probs=87.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC------CCCEEEEEEC--C--CcEEEEECCC-CcEEEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN------GEETLSAGCQ--S--GSIKIWNLAV-PTVQRT 95 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp------dg~~LaSgs~--D--GtV~VWDl~t-g~~v~~ 95 (845)
+..+++....++-|.+||+. |+.+..+. .+.++.|..-. ...-|++++. + .+|.+|.+.. ...+..
T Consensus 39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~ 115 (353)
T d1h6la_ 39 QNSKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (353)
T ss_dssp GGCEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEE
T ss_pred CccEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccccc
Confidence 45677777777779999985 77777665 35666665432 2223455542 2 3688888753 334444
Q ss_pred EcCC-------CCCeEEEEE--ccC-CC-EEEEEECCCeEEEEECC---CC----ceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 96 LNGH-------KSSITSVDF--HPY-GD-YLCSGSLDSFIKLWDLR---RK----GCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 96 l~~h-------~~~V~~laf--spd-g~-~Lasgs~DG~I~IWDl~---t~----~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
+... ...+..+|+ ++. +. ++++...+|.+..|.+. .+ +.++.+. ....+..+.++...+.|
T Consensus 116 ~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDde~~~L 194 (353)
T d1h6la_ 116 ITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAADDEYGSL 194 (353)
T ss_dssp CSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEEETTTTEE
T ss_pred ccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEEeCCCCcE
Confidence 4321 123556666 554 44 56677788999888763 23 3445555 45678899999988899
Q ss_pred EEEeCCCcEEE
Q psy467 158 ASGGEDGVVRI 168 (845)
Q Consensus 158 asgs~DG~I~I 168 (845)
+.+-++.-+..
T Consensus 195 yisEE~~Giw~ 205 (353)
T d1h6la_ 195 YIAEEDEAIWK 205 (353)
T ss_dssp EEEETTTEEEE
T ss_pred EEecCccceEE
Confidence 99888765544
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.64 E-value=11 Score=35.61 Aligned_cols=78 Identities=13% Similarity=0.107 Sum_probs=35.1
Q ss_pred CeEEEEECCCCeEEEEecCC-CCCEEEEEEeCCCCEEEEEeCCC------EEEEEecCCceEEEecCCCCCe-EEEEEcC
Q psy467 302 RTVNFWDLEKFSLVSTTEKN-SSTIRRLTFSEGGECLLGGDTEG------LKVYGWEPARQYDAQPMGWGKV-QDLAVTG 373 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl~gh-~~~VtslafSpdG~~Lasgs~DG------I~IWDl~tgk~l~tl~~h~~~V-tsVafSd 373 (845)
..+..||..+.+....-... .....+++. .++.+++.|+.++ ...+|..+.+....-....... .+++..+
T Consensus 164 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~ 242 (288)
T d1zgka1 164 NSAECYYPERNEWRMITAMNTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQ 242 (288)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred ceEEEeeccccccccccccccccccccccc-eeeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEEEC
Confidence 35778888766533221111 111112222 2455666655442 5667766654332211111111 2333347
Q ss_pred CceEEEE
Q psy467 374 TQLWFRR 380 (845)
Q Consensus 374 g~lLaaS 380 (845)
+++++.+
T Consensus 243 ~~l~v~G 249 (288)
T d1zgka1 243 GRIYVLG 249 (288)
T ss_dssp TEEEEEC
T ss_pred CEEEEEe
Confidence 7777765
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.45 E-value=8.3 Score=39.80 Aligned_cols=136 Identities=10% Similarity=0.028 Sum_probs=80.3
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
.|..++|+. +.|+... ++.+..++...-........-..++..+.++|. .++....+|.+.++++..++.....
T Consensus 88 ~v~~vafs~---d~l~v~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~ 161 (381)
T d1xipa_ 88 DVIFVCFHG---DQVLVST-RNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLA 161 (381)
T ss_dssp TEEEEEEET---TEEEEEE-SSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CeEEEEeeC---CEEEEEe-CCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCcccccc
Confidence 588999965 4566554 456888887665544444445667888888874 5666677999999999987643322
Q ss_pred c-----CCCCCeEEEEEccCCCEEEEEECCCeEEE-EECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 97 N-----GHKSSITSVDFHPYGDYLCSGSLDSFIKL-WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 97 ~-----~h~~~V~~lafspdg~~Lasgs~DG~I~I-WDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
. .-.+.+.+++|++.|..++++..++ ..+ -++.....+.........+.++.|-.+..++++
T Consensus 162 ~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vv 229 (381)
T d1xipa_ 162 QNVTSFDVTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 229 (381)
T ss_dssp ESEEEEEECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CCcceEEecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccccCCCcCCCcceeEEEEecCceEEEE
Confidence 1 1234577777877777777664322 111 111111111000123456788999855444443
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=84.61 E-value=7.8 Score=40.76 Aligned_cols=112 Identities=9% Similarity=0.040 Sum_probs=64.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEE--Eec------CCCCCeEEEEEcCC---CCEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM--SLS------GHSTPVESVQFGNG---EETLSAG 76 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~--~l~------~h~~~V~sLafSpd---g~~LaSg 76 (845)
++.+...-..-++|+|.| +|++|++--..|.|++++..++.... .+. .-......|+|+|+ ..+|...
T Consensus 19 ~~~ia~~L~~P~~la~~p-dg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvs 97 (450)
T d1crua_ 19 KKVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (450)
T ss_dssp EEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEECCCCCceEEEEeC-CCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEE
Confidence 444554456788999999 89988876557999999887765432 221 11356789999984 3444432
Q ss_pred EC-------C----Cc--EEEEECCCCc--------EEEEEc-CCCCCeEEEEEccCCCEEEEEEC
Q psy467 77 CQ-------S----GS--IKIWNLAVPT--------VQRTLN-GHKSSITSVDFHPYGDYLCSGSL 120 (845)
Q Consensus 77 s~-------D----Gt--V~VWDl~tg~--------~v~~l~-~h~~~V~~lafspdg~~Lasgs~ 120 (845)
.. + +. +..+...... .+..+. ........|.|.|||.+.++.+.
T Consensus 98 yt~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd 163 (450)
T d1crua_ 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (450)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred EecCCCCCcccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence 11 1 12 3333332221 011111 12234578999999987776553
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=81.09 E-value=4.4 Score=40.60 Aligned_cols=96 Identities=10% Similarity=0.120 Sum_probs=58.7
Q ss_pred eEEEcCCCCcccceEEEEEeCCC-----------eEEEEECCCCeE--EEEe-cCCCCCEEEEEEeCCCCEEEEEeCCC-
Q psy467 280 SLSILPQSPMLCFILTTSSSADR-----------TVNFWDLEKFSL--VSTT-EKNSSTIRRLTFSEGGECLLGGDTEG- 344 (845)
Q Consensus 280 slafSPdg~~~~~~lLatgs~DG-----------~I~IWDl~s~~~--l~tl-~gh~~~VtslafSpdG~~Lasgs~DG- 344 (845)
..+...+|+ +++.|+.+. .+.+||..+++- .... ..|.......++.++|++++.|+.+.
T Consensus 24 ~a~~~~~gk-----v~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~ 98 (387)
T d1k3ia3 24 AAIEPTSGR-----VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK 98 (387)
T ss_dssp EEEETTTTE-----EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT
T ss_pred EEEEeeCCE-----EEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCc
Confidence 334445666 677776431 378999987642 2222 23444455678899999999998776
Q ss_pred -EEEEEecCCceEEE--ecCCCCCeEEEEEcCCceEEEE
Q psy467 345 -LKVYGWEPARQYDA--QPMGWGKVQDLAVTGTQLWFRR 380 (845)
Q Consensus 345 -I~IWDl~tgk~l~t--l~~h~~~VtsVafSdg~lLaaS 380 (845)
+.+||..+..-... +......-..+...||++++.+
T Consensus 99 ~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~G 137 (387)
T d1k3ia3 99 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIG 137 (387)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEEC
T ss_pred ceeEecCccCcccccccccccccccceeeecCCceeeec
Confidence 99999988654322 2222222333333388887776
|