Psyllid ID: psy4704


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120---
MSTSLQRSVLSLLEDTGVSLSTEGEDRLYRSHGQTNTEIYQLKYTSIMKRMPDVVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAEDASRMEEVD
ccHHHHHHHHHHHHHccccccccHHHHHHHccccccHHHHHHHccccccccccEEEEEHHHHHccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccc
ccHHHHHHHHHHHHHcccHHHHHHHHcccEcEccccHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHccccHccc
MSTSLQRSVLSLLEDTgvslstegedrlyrshgqtnteIYQLKYTSIMKrmpdvvmwpeyivlssgftleepqVHAARIHRMIKLglgiededevatgddvkagdipvaegeaedasrmeevd
mstslqrsVLSLLedtgvslstegedrlyrshgqtnteiyQLKYTSIMKRMPDVVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEvatgddvkagdipvaegeaedasrmeevd
MSTSLQRSVLSLLEDTGVSLSTEGEDRLYRSHGQTNTEIYQLKYTSIMKRMPDVVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAEDASRMEEVD
*********************************QTNTEIYQLKYTSIMKRMPDVVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIED********************************
*****QR*VLSLLE****************SHGQTNTEIYQLKY****KRMPDVVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLG***************************ASRMEEVD
********VLSLLEDTGVSLSTEGEDRLYRSHGQTNTEIYQLKYTSIMKRMPDVVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVA**************
******RS*LSLLEDTGVSLSTEGEDRLYRSHGQTNTEIYQLKYTSIMKRMPDVVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIE*********************************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSTSLQRSVLSLLEDTGVSLSTEGEDRLYRSHGQTNTEIYQLKYTSIMKRMPDVVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAEDASRMEEVD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query123 2.2.26 [Sep-21-2011]
P02828717 Heat shock protein 83 OS= yes N/A 0.560 0.096 0.619 3e-15
O02192716 Heat shock protein 83 OS= N/A N/A 0.569 0.097 0.557 9e-15
Q5R710724 Heat shock protein HSP 90 yes N/A 0.552 0.093 0.625 5e-14
Q4R4T5724 Heat shock protein HSP 90 N/A N/A 0.552 0.093 0.625 5e-14
Q9GKX8724 Heat shock protein HSP 90 yes N/A 0.552 0.093 0.625 5e-14
P08238724 Heat shock protein HSP 90 yes N/A 0.552 0.093 0.625 6e-14
P04809717 Heat shock protein 83 OS= yes N/A 0.569 0.097 0.542 7e-14
Q90474725 Heat shock protein HSP 90 yes N/A 0.560 0.095 0.577 1e-13
P34058724 Heat shock protein HSP 90 yes N/A 0.552 0.093 0.611 2e-13
P11499724 Heat shock protein HSP 90 yes N/A 0.552 0.093 0.611 2e-13
>sp|P02828|HSP83_DROME Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1 Back     alignment and function desciption
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 2/71 (2%)

Query: 54  VVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVK-AGDIPVAEGE 112
           V++  E  +LSSGF+L+ PQVHA+RI+RMIKLGLGI DEDE  T DD + AGD P    +
Sbjct: 648 VILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGI-DEDEPMTTDDAQSAGDAPSLVED 706

Query: 113 AEDASRMEEVD 123
            EDAS MEEVD
Sbjct: 707 TEDASHMEEVD 717




Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.
Drosophila melanogaster (taxid: 7227)
>sp|O02192|HSP83_DROAV Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1 Back     alignment and function description
>sp|Q5R710|HS90B_PONAB Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1 Back     alignment and function description
>sp|Q4R4T5|HS90B_MACFA Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1 Back     alignment and function description
>sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3 Back     alignment and function description
>sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4 Back     alignment and function description
>sp|P04809|HSP83_DROPS Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2 Back     alignment and function description
>sp|Q90474|H90A1_DANRE Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=1 SV=3 Back     alignment and function description
>sp|P34058|HS90B_RAT Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4 Back     alignment and function description
>sp|P11499|HS90B_MOUSE Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query123
332373064 709 unknown [Dendroctonus ponderosae] 0.560 0.097 0.685 6e-18
311976565 722 heat shock protein 90 [Panonychus citri] 0.609 0.103 0.644 1e-17
124108396 716 heat shock protein 90 [Dendrolimus punct 0.560 0.096 0.657 5e-17
124365189 715 heat shock protein 90 [Dendrolimus punct 0.560 0.096 0.657 5e-17
124028609 715 heat shock protein 90 [Dendrolimus super 0.560 0.096 0.657 5e-17
124028607 715 heat shock protein 90 [Dendrolimus tabul 0.560 0.096 0.657 5e-17
124365193 715 heat shock protein 90 [Dendrolimus tabul 0.560 0.096 0.657 5e-17
304368171 718 heat shock protein 90 [Argynnis paphia] 0.560 0.096 0.657 5e-17
310619468 692 heat shock protein 90 [Carposina sasakii 0.560 0.099 0.657 7e-17
310893429 717 heat shock protein 90 [Helicoverpa armig 0.560 0.096 0.657 8e-17
>gi|332373064|gb|AEE61673.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
 Score = 94.7 bits (234), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/70 (68%), Positives = 56/70 (80%), Gaps = 1/70 (1%)

Query: 54  VVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEA 113
           V++  E  +LSSGFTLEEPQVHA+RI+RMIKLGLGI DEDEV   +D+   D PV  G+A
Sbjct: 641 VILLFETALLSSGFTLEEPQVHASRIYRMIKLGLGI-DEDEVMLTEDIPVADAPVEGGDA 699

Query: 114 EDASRMEEVD 123
           EDASRMEEVD
Sbjct: 700 EDASRMEEVD 709




Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|311976565|gb|ADQ20111.1| heat shock protein 90 [Panonychus citri] Back     alignment and taxonomy information
>gi|124108396|gb|ABM90804.1| heat shock protein 90 [Dendrolimus punctatus] Back     alignment and taxonomy information
>gi|124365189|gb|ABN09626.1| heat shock protein 90 [Dendrolimus punctatus x Dendrolimus tabulaeformis] Back     alignment and taxonomy information
>gi|124028609|gb|ABM89112.1| heat shock protein 90 [Dendrolimus superans] Back     alignment and taxonomy information
>gi|124028607|gb|ABM89111.1| heat shock protein 90 [Dendrolimus tabulaeformis] Back     alignment and taxonomy information
>gi|124365193|gb|ABN09628.1| heat shock protein 90 [Dendrolimus tabulaeformis x Dendrolimus punctatus] Back     alignment and taxonomy information
>gi|304368171|gb|ADM26735.1| heat shock protein 90 [Argynnis paphia] Back     alignment and taxonomy information
>gi|310619468|gb|ADP01837.1| heat shock protein 90 [Carposina sasakii] Back     alignment and taxonomy information
>gi|310893429|gb|ADP37710.1| heat shock protein 90 [Helicoverpa armigera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query123
UNIPROTKB|G5E507724 HSP90AB1 "Heat shock protein H 0.585 0.099 0.594 1.3e-15
FB|FBgn0001233717 Hsp83 "Heat shock protein 83" 0.601 0.103 0.597 1e-14
ZFIN|ZDB-GENE-990415-94725 hsp90aa1.1 "heat shock protein 0.601 0.102 0.558 1.4e-14
UNIPROTKB|F1S9Z1252 HSP90AA1 "Heat shock protein H 0.585 0.285 0.531 7.9e-14
UNIPROTKB|E2RLS3724 SLC29A1 "Uncharacterized prote 0.593 0.100 0.602 9.7e-14
UNIPROTKB|Q9GKX8724 HSP90AB1 "Heat shock protein H 0.593 0.100 0.602 9.7e-14
UNIPROTKB|P08238724 HSP90AB1 "Heat shock protein H 0.593 0.100 0.602 1.2e-13
UNIPROTKB|Q76LV1724 HSP90AB1 "Heat shock protein H 0.585 0.099 0.594 2e-13
UNIPROTKB|F1RQU2724 HSP90AB1 "Uncharacterized prot 0.585 0.099 0.594 2e-13
MGI|MGI:96247724 Hsp90ab1 "heat shock protein 9 0.585 0.099 0.594 2e-13
UNIPROTKB|G5E507 HSP90AB1 "Heat shock protein HSP 90-beta" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 186 (70.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
 Identities = 47/79 (59%), Positives = 58/79 (73%)

Query:    49 KRMPD-VVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAG--- 104
             K + D VV+  E  +LSSGF+LE+PQ H+ RI+RMIKLGLGI DEDEV T ++  A    
Sbjct:   649 KAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI-DEDEV-TAEEPSAAVPD 706

Query:   105 DIPVAEGEAEDASRMEEVD 123
             +IP  EG+ EDASRMEEVD
Sbjct:   707 EIPPLEGD-EDASRMEEVD 724


GO:0060338 "regulation of type I interferon-mediated signaling pathway" evidence=IEA
GO:0060334 "regulation of interferon-gamma-mediated signaling pathway" evidence=IEA
GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA
GO:0008180 "signalosome" evidence=IEA
GO:0005739 "mitochondrion" evidence=IEA
GO:0001890 "placenta development" evidence=IEA
GO:0051082 "unfolded protein binding" evidence=IEA
GO:0006950 "response to stress" evidence=IEA
GO:0006457 "protein folding" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
FB|FBgn0001233 Hsp83 "Heat shock protein 83" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-990415-94 hsp90aa1.1 "heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1S9Z1 HSP90AA1 "Heat shock protein HSP 90-alpha" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RLS3 SLC29A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GKX8 HSP90AB1 "Heat shock protein HSP 90-beta" [Equus caballus (taxid:9796)] Back     alignment and assigned GO terms
UNIPROTKB|P08238 HSP90AB1 "Heat shock protein HSP 90-beta" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q76LV1 HSP90AB1 "Heat shock protein HSP 90-beta" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RQU2 HSP90AB1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:96247 Hsp90ab1 "heat shock protein 90 alpha (cytosolic), class B member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P02828HSP83_DROMENo assigned EC number0.61970.56090.0962yesN/A
Q5R710HS90B_PONABNo assigned EC number0.6250.55280.0939yesN/A
Q9GKX8HS90B_HORSENo assigned EC number0.6250.55280.0939yesN/A
P27323HS901_ARATHNo assigned EC number0.52630.56910.1yesN/A
P08238HS90B_HUMANNo assigned EC number0.6250.55280.0939yesN/A
Q90474H90A1_DANRENo assigned EC number0.57740.56090.0951yesN/A
P34058HS90B_RATNo assigned EC number0.61110.55280.0939yesN/A
P11499HS90B_MOUSENo assigned EC number0.61110.55280.0939yesN/A
Q76LV1HS90B_BOVINNo assigned EC number0.61110.55280.0939yesN/A
Q04619HS90B_CHICKNo assigned EC number0.54920.56090.0951yesN/A
Q18688HSP90_CAEELNo assigned EC number0.50640.51210.0897yesN/A
P04809HSP83_DROPSNo assigned EC number0.54280.56910.0976yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query123
pfam00183529 pfam00183, HSP90, Hsp90 protein 5e-15
PTZ00272701 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp 7e-09
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information
 Score = 69.4 bits (170), Expect = 5e-15
 Identities = 28/61 (45%), Positives = 42/61 (68%)

Query: 63  LSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAEDASRMEEV 122
           L+SGF+LE+P+  A+RI+RMIKLGL I++++EV   D+    +      E  + S+MEEV
Sbjct: 469 LTSGFSLEDPKAFASRIYRMIKLGLSIDEDEEVEEEDEEAEVETTEPAEEDAEDSKMEEV 528

Query: 123 D 123
           D
Sbjct: 529 D 529


Length = 529

>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 123
KOG1233|consensus 613 99.77
PF00183531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 98.96
KOG0020|consensus785 98.92
PTZ00272701 heat shock protein 83 kDa (Hsp83); Provisional 98.6
KOG0019|consensus656 98.53
PTZ00130814 heat shock protein 90; Provisional 97.95
PRK05218613 heat shock protein 90; Provisional 96.63
COG0326623 HtpG Molecular chaperone, HSP90 family [Posttransl 96.11
PRK14083601 HSP90 family protein; Provisional 95.09
>KOG1233|consensus Back     alignment and domain information
Probab=99.77  E-value=1.6e-19  Score=155.55  Aligned_cols=56  Identities=38%  Similarity=0.689  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHhcccccccchhhhhhhccCchHHHHHHhhcCCccccccceEeecccc
Q psy4704           5 LQRSVLSLLEDTGVSLSTEGEDRLYRSHGQTNTEIYQLKYTSIMKRMPDVVMWPEYI   61 (123)
Q Consensus         5 ~~~~fl~~l~~~~~~~s~d~~dRl~r~HGhtl~di~~LR~g~~~~Ripd~vllpetA   61 (123)
                      -|+.||..|++++|+||+++.|||||+||||+||||+||+|+| +||||+||||.|-
T Consensus       115 eNedflh~Lket~isyS~Ea~dRl~R~HGhtlhdi~~Lregkf-~RiPDiVvWP~ch  170 (613)
T KOG1233|consen  115 ENEDFLHFLKETKISYSNEARDRLMRGHGHTLHDIINLREGKF-PRIPDIVVWPKCH  170 (613)
T ss_pred             cchHHHHHHHhccCccchhHHHHHHhhcCchHHHHHHHhcCcc-CCCCceEecccch
Confidence            4899999999999999999999999999999999999999999 7999999999873



>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information
>KOG0020|consensus Back     alignment and domain information
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>KOG0019|consensus Back     alignment and domain information
>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query123
3q6m_A448 Crystal Structure Of Human Mc-Hsp90 In C2221 Space 3e-14
4bca_A 658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 2e-06
4bc7_A 658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 2e-06
4bby_A 658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 2e-06
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 Back     alignment and structure

Iteration: 1

Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 6/73 (8%) Query: 54 VVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAG---DIPVAE 110 V++ E +LSSGF+LE+PQ HA RI+RMIKLGLGI+++D T DD A ++P E Sbjct: 373 VILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDD--PTADDTSAAVTEEMPPLE 430 Query: 111 GEAEDASRMEEVD 123 G+ +D SRMEEVD Sbjct: 431 GD-DDTSRMEEVD 442
>pdb|4BCA|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Tyr578phe Mutant Length = 658 Back     alignment and structure
>pdb|4BC7|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Arg419his Mutant Length = 658 Back     alignment and structure
>pdb|4BBY|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Wild-Type Length = 658 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query123
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 2e-14
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 7e-09
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 4e-06
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 3e-05
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 9e-05
2uuu_A 584 Alkyldihydroxyacetonephosphate synthase; transfera 7e-04
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 Back     alignment and structure
 Score = 67.0 bits (164), Expect = 2e-14
 Identities = 32/62 (51%), Positives = 41/62 (66%)

Query: 62  VLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAEDASRMEE 121
           +LSSGF+LE+PQ HA RI+RMIKLGLGI+++D  A        +        +D SRMEE
Sbjct: 381 LLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLEGDDDTSRMEE 440

Query: 122 VD 123
           VD
Sbjct: 441 VD 442


>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 Back     alignment and structure
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Length = 584 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query123
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 99.27
4bby_A 658 Alkyldihydroxyacetonephosphate synthase, peroxiso; 99.19
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 98.61
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 98.4
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 98.29
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 98.11
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 98.0
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 97.4
2uuu_A 584 Alkyldihydroxyacetonephosphate synthase; transfera 95.8
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Back     alignment and structure
Probab=99.27  E-value=6e-13  Score=113.98  Aligned_cols=69  Identities=54%  Similarity=0.846  Sum_probs=34.2

Q ss_pred             eEeeccccccccCCCCCChHHHHHHHHHHHHhcCCCCcccccccCC-CCCCCCCCCCCCccccccccccCC
Q psy4704          54 VVMWPEYIVLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGD-DVKAGDIPVAEGEAEDASRMEEVD  123 (123)
Q Consensus        54 ~vllpetAlL~SGF~ledp~~Fa~RI~~m~~~~L~i~~~~~~~~~e-~~~~~e~p~~e~~~~~~s~~EevD  123 (123)
                      +.++|++|+|+|||+|+||+.|++||++||++||||+.++.+.+++ +.++++.|+.+..+ +++.|++||
T Consensus       373 ~~lLyd~AlL~~G~~l~DP~~f~~ri~~ll~~~L~id~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  442 (448)
T 3q6m_A          373 VILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLEGDD-DTSRMEEVD  442 (448)
T ss_dssp             HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHTTC------------------------------------
T ss_pred             HHHHHHhHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCccccccccccccccCCCCCCCCCc-chhhhhhhc
Confidence            6799999999999999999999999999999999999544332222 33455667777764 788999986



>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A* Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query123
d1sf8a_115 Chaperone protein HtpG {Escherichia coli [TaxId: 5 97.87
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: HSP90 C-terminal domain
superfamily: HSP90 C-terminal domain
family: HSP90 C-terminal domain
domain: Chaperone protein HtpG
species: Escherichia coli [TaxId: 562]
Probab=97.87  E-value=7.4e-07  Score=61.75  Aligned_cols=31  Identities=23%  Similarity=0.405  Sum_probs=29.6

Q ss_pred             eEeeccccccccCCCCCChHHHHHHHHHHHH
Q psy4704          54 VVMWPEYIVLSSGFTLEEPQVHAARIHRMIK   84 (123)
Q Consensus        54 ~vllpetAlL~SGF~ledp~~Fa~RI~~m~~   84 (123)
                      +.++|++|+|.+||.++||..|++||+++|.
T Consensus        84 ~~~L~d~A~l~~G~~l~Dp~~f~~ri~~ll~  114 (115)
T d1sf8a_          84 VELLLDQALLAERGTLEDPNLFIRRMNQLLV  114 (115)
T ss_dssp             HHHHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHh
Confidence            7899999999999999999999999999984