Psyllid ID: psy4758

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQPWNDSEYDGDKKKSRK
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHcHHHHEEHcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccccHHHHHccHHHHHHHHHHHcccHHHHHHHHHcHHHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEHHHHHHHHcccccccccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHcccccc
Coil and Loop (DISEMBL)
mskwappmerARLFSFafsgtqfgnlvtlpvagllagspwgwpsifYVSGAVAIVWAAAWCyiganspaqhpfisleERIYIETSLVhsstvsssmkvpwkaILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDiksngflsaaPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTytgflsnhldlspnfagtlmgFTNGCANIASILGPLFVGfivtdntsvsQWQTIFLIAAAIFFFGNLIFLIFgtsevqpwndseydgdkkksrk
Flexible Loop (DISEMBL)
MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFgtsevqpwndseydgdkkksrk
Low Complexity Region (SEG)
MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIEtslvhsstvsssMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTifliaaaifffgnliflifgTSEVQPWNDSEYDGDKKKSRK
Disordered region (IsUnstruct)
**********ARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQP***************
Disordered Region (DISOPRED)
MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER********************WKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQP***************
Disordered Region (DISEMBL)
MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLV*********KVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQPWN*************
Disordered Region (DISPRO)
*SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV*****************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQPWNDSEYDGDKKKSRK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	318	2.2.26 [Sep-21-2011]
Q9V7S5	529	Putative inorganic phosph	no	N/A	0.981	0.589	0.416	3e-71
O61369	483	Putative inorganic phosph	N/A	N/A	0.981	0.645	0.410	2e-69
Q8BN82	495	Sialin OS=Mus musculus GN	yes	N/A	0.971	0.624	0.383	1e-62
Q9P2U8	582	Vesicular glutamate trans	yes	N/A	0.974	0.532	0.386	3e-62
Q5W8I7	587	Vesicular glutamate trans	no	N/A	0.974	0.528	0.389	4e-62
A6QLI1	582	Vesicular glutamate trans	yes	N/A	0.974	0.532	0.382	6e-62
Q9JI12	582	Vesicular glutamate trans	no	N/A	0.974	0.532	0.382	7e-62
Q9NRA2	495	Sialin OS=Homo sapiens GN	no	N/A	0.971	0.624	0.380	2e-61
Q8BLE7	582	Vesicular glutamate trans	no	N/A	0.974	0.532	0.379	2e-61
Q1L8X9	590	Vesicular glutamate trans	no	N/A	0.974	0.525	0.382	7e-61

>sp|Q9V7S5|PICO_DROME Putative inorganic phosphate cotransporter OS=Drosophila melanogaster GN=Picot PE=1 SV=1

 Score =  268 bits (686), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 132/317 (41%), Positives = 200/317 (63%), Gaps = 5/317 (1%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA--GSPWGWPSIFYVSGAVAIVWAA 58
           ++KW PP ER+R+ +  ++G QFG ++++P++GLLA  G   GWPSIFYV G V  VW+ 
Sbjct: 187 LAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSI 246

Query: 59  AWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLC 118
           A+       P+ HP I   E+ YI  SL  +  V S   +P+KAI+ SLP +A+L  H+ 
Sbjct: 247 AFLIFVHEDPSSHPTIDEREKKYINDSLWGTDVVKSP-PIPFKAIIKSLPFYAILFAHMG 305

Query: 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
            N+GY TL+TE+P+Y+  VL+F +KSNG LS+ PYLA W+  +  S +AD++++ +  S 
Sbjct: 306 HNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMISSKRFSH 365

Query: 179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
           T +RK+ N+IG +G   AL+  S+ G +    +  LT+ + +N G Y+GF  NHLDL+P 
Sbjct: 366 TATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPR 425

Query: 239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTS--VSQWQTIFLIAAAIFFFGNLIFLIF 296
           FAG LM  TN  AN+A +L P+  G +++D +   + QWQ +F IAA ++      + IF
Sbjct: 426 FAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYIICGTFYNIF 485

Query: 297 GTSEVQPWNDSEYDGDK 313
           G+ E Q W++ E D  K
Sbjct: 486 GSGERQYWDNPEDDEQK 502

May be an inorganic phosphate cotransporter.
Drosophila melanogaster (taxid: 7227)

>sp|O61369|PICO_DROAN Putative inorganic phosphate cotransporter OS=Drosophila ananassae GN=Picot PE=3 SV=1

 Score =  262 bits (670), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 130/317 (41%), Positives = 200/317 (63%), Gaps = 5/317 (1%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA--GSPWGWPSIFYVSGAVAIVWAA 58
           ++KW PP ER+R+ +  ++G QFG ++++P++GLLA  G   GWPSIFYV G V  VW+ 
Sbjct: 141 LAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSI 200

Query: 59  AWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLC 118
           A+       P+ HP I   E+ YI  SL  +  + S   +P+K+I+ SLP +A+L  H+ 
Sbjct: 201 AFLIFVYEDPSTHPKIDEREKKYINESLWGTDVIKSP-PIPFKSIVKSLPFYAILFAHMG 259

Query: 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
            N+GY TL+TE+P+Y+  VL+F +KSNG LS+ PYLA W+L +  S +AD++++ +  S 
Sbjct: 260 HNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLLSMFISVIADWMISSKRFSL 319

Query: 179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
           T +RK+ N+IG +G   AL+  S+ G +    +  LT+ + +N G Y+GF  NHLDL+P 
Sbjct: 320 TATRKIINSIGQYGPGLALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPR 379

Query: 239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTS--VSQWQTIFLIAAAIFFFGNLIFLIF 296
           FAG LM  TN  AN+A +L P+  G +++D +   + QWQ +F IAA ++      + IF
Sbjct: 380 FAGFLMSITNCSANLAGLLAPIAAGNLISDPSKPVMGQWQIVFFIAAFVYIICGTFYNIF 439

Query: 297 GTSEVQPWNDSEYDGDK 313
           G+ E Q W++   D  K
Sbjct: 440 GSGERQFWDNPSEDEQK 456

May be an inorganic phosphate cotransporter.

Drosophila ananassae (taxid: 7217)

>sp|Q8BN82|S17A5_MOUSE Sialin OS=Mus musculus GN=Slc17a5 PE=2 SV=2

 Score =  240 bits (612), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 193/313 (61%), Gaps = 4/313 (1%)

Query: 2   SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61
           S WAPP+ER++L + +++G Q G +++LP++G++      W  +FY+ G V IVW   W 
Sbjct: 187 SSWAPPLERSKLLTISYAGAQLGTVISLPLSGIIC-YYMNWTYVFYLFGIVGIVWFILWM 245

Query: 62  YIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNW 121
           +I +++P  H  IS  E+ YI +SL   + +SS   VPW +IL SLP+WA+++ H   NW
Sbjct: 246 WIVSDTPETHKTISHYEKEYIVSSL--KNQLSSQKVVPWGSILKSLPLWAIVVAHFSYNW 303

Query: 122 GYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVS 181
            ++TLLT +P+Y+  +L+F+++ NGFLSA PY   W+ +++    ADY+  K   S    
Sbjct: 304 SFYTLLTLLPTYMKEILRFNVQENGFLSALPYFGCWLCMILCGQAADYLRVKWNFSTISV 363

Query: 182 RKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG 241
           R++++ +G+ G A  LV   F+G +   A+  LT++  +     +GF  NHLD++P++AG
Sbjct: 364 RRIFSLVGMVGPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFASSGFSINHLDIAPSYAG 423

Query: 242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV 301
            L+G TN  A I  + GP+    +  DNT + +WQT+F IAAAI  FG + F +F   EV
Sbjct: 424 ILLGITNTFATIPGMTGPIIAKSLTPDNT-IREWQTVFCIAAAINVFGAIFFTLFAKGEV 482

Query: 302 QPWNDSEYDGDKK 314
           Q W  S++ G + 
Sbjct: 483 QSWALSDHHGHRN 495

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.

Mus musculus (taxid: 10090)

>sp|Q9P2U8|VGLU2_HUMAN Vesicular glutamate transporter 2 OS=Homo sapiens GN=SLC17A6 PE=1 SV=1

 Score =  238 bits (608), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 122/316 (38%), Positives = 190/316 (60%), Gaps = 6/316 (1%)

Query: 2   SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61
           SKWAPP+ER+RL + +F G+  G ++ +P+AG+L     GW S+FYV G+  +VW   W 
Sbjct: 203 SKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILV-QYTGWSSVFYVYGSFGMVWYMFWL 261

Query: 62  YIGANSPAQHPFISLEERIYIETSLVHSSTVSSSM---KVPWKAILTSLPVWAVLITHLC 118
            +   SPA+HP I+ EER YIE S+  S+ +  +M   K PW+   TS+PV+A+++ + C
Sbjct: 262 LVSYESPAKHPTITDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFC 321

Query: 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
           ++W ++ LL   P+Y   V  F+I   G LSA P+L   I++ +   +AD++ +KQILS 
Sbjct: 322 RSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILST 381

Query: 179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
           T  RK+ N  G    A  L+ + +     V AI+ L LA+  +    +GF  NHLD++P 
Sbjct: 382 TTVRKIMNCGGFGMEATLLLVVGYSHTRGV-AISFLVLAVGFSGFAISGFNVNHLDIAPR 440

Query: 239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298
           +A  LMG +NG   ++ ++ P+ VG  +T N S  +WQ +FLIAA + + G + + IF +
Sbjct: 441 YASILMGISNGVGTLSGMVCPIIVG-AMTKNKSREEWQYVFLIAALVHYGGVIFYAIFAS 499

Query: 299 SEVQPWNDSEYDGDKK 314
            E QPW D E   ++K
Sbjct: 500 GEKQPWADPEETSEEK 515

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.

Homo sapiens (taxid: 9606)

>sp|Q5W8I7|VGL2B_DANRE Vesicular glutamate transporter 2.2 OS=Danio rerio GN=slc17a6a PE=2 SV=1

 Score =  238 bits (607), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 188/316 (59%), Gaps = 6/316 (1%)

Query: 2   SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61
           SKWAPP+ER+RL + +F G+  G +V +P+AG+L     GW S+FY+ G+  IVW   W 
Sbjct: 204 SKWAPPLERSRLATTSFCGSYAGAVVAMPLAGILVQYS-GWSSVFYIYGSFGIVWYMFWI 262

Query: 62  YIGANSPAQHPFISLEERIYIETSLVHSSTVSSSM---KVPWKAILTSLPVWAVLITHLC 118
            +   SPA HP I+ EER YIE S+  S+ +  +M   K PW+   TS+PV+A+++ + C
Sbjct: 263 LVSYESPADHPTITDEERTYIEESIGESAKLLGAMEKYKTPWRKFFTSMPVYAIIVANFC 322

Query: 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
           ++W ++ LL   P+Y   V  F+I   G +SA P+L   I++ +   LADY+ +K IL+ 
Sbjct: 323 RSWTFYLLLISQPAYFEEVFGFEISKVGMVSALPHLVMTIIVPIGGQLADYLRSKNILTT 382

Query: 179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
           T  RK+ N  G    A  L+ + F     V AI+ L LA+  +    +GF  NHLD++P 
Sbjct: 383 TTVRKIMNCGGFGMEATLLLVVGFSHSKGV-AISFLVLAVGFSGFAISGFNVNHLDIAPR 441

Query: 239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298
           +A  LMG +NG   ++ ++ PL VG  +T N +  +WQ +FLIA+ + + G + + IF +
Sbjct: 442 YASILMGISNGVGTLSGMVCPLIVG-AMTKNKTREEWQNVFLIASLVHYGGVIFYGIFAS 500

Query: 299 SEVQPWNDSEYDGDKK 314
            E QPW D E   D+K
Sbjct: 501 GEKQPWADPEETSDEK 516

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.

Danio rerio (taxid: 7955)

>sp|A6QLI1|VGLU2_BOVIN Vesicular glutamate transporter 2 OS=Bos taurus GN=SLC17A6 PE=2 SV=1

 Score =  238 bits (606), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 121/316 (38%), Positives = 190/316 (60%), Gaps = 6/316 (1%)

Query: 2   SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61
           SKWAPP+ER+RL + +F G+  G ++ +P+AG+L     GW S+FYV G+  ++W   W 
Sbjct: 203 SKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQYT-GWSSVFYVYGSFGMIWYMFWL 261

Query: 62  YIGANSPAQHPFISLEERIYIETSLVHSSTVSSSM---KVPWKAILTSLPVWAVLITHLC 118
            +   SPA+HP I+ EER YIE S+  S+ +  +M   K PW+   TS+PV+A+++ + C
Sbjct: 262 LVSYESPAKHPTITDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFC 321

Query: 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
           ++W ++ LL   P+Y   V  F+I   G LSA P+L   I++ +   +AD++ +KQILS 
Sbjct: 322 RSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILST 381

Query: 179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
           T  RK+ N  G    A  L+ + +     V AI+ L LA+  +    +GF  NHLD++P 
Sbjct: 382 TTVRKIMNCGGFGMEATLLLVVGYSHTRGV-AISFLVLAVGFSGFAISGFNVNHLDIAPR 440

Query: 239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298
           +A  LMG +NG   ++ ++ P+ VG  +T N S  +WQ +FLIAA + + G + + IF +
Sbjct: 441 YASILMGISNGVGTLSGMVCPIIVG-AMTKNKSREEWQYVFLIAALVHYGGVIFYAIFAS 499

Query: 299 SEVQPWNDSEYDGDKK 314
            E QPW D E   ++K
Sbjct: 500 GEKQPWADPEETSEEK 515

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.

Bos taurus (taxid: 9913)

>sp|Q9JI12|VGLU2_RAT Vesicular glutamate transporter 2 OS=Rattus norvegicus GN=Slc17a6 PE=1 SV=1

 Score =  237 bits (605), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 121/316 (38%), Positives = 190/316 (60%), Gaps = 6/316 (1%)

Query: 2   SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61
           SKWAPP+ER+RL + +F G+  G ++ +P+AG+L     GW S+FYV G+  +VW   W 
Sbjct: 203 SKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQYT-GWSSVFYVYGSFGMVWYMFWL 261

Query: 62  YIGANSPAQHPFISLEERIYIETSLVHSSTVSSSM---KVPWKAILTSLPVWAVLITHLC 118
            +   SPA+HP I+ EER YIE S+  S+ +  +M   K PW+   TS+PV+A+++ + C
Sbjct: 262 LVSYESPAKHPTITDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFC 321

Query: 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
           ++W ++ LL   P+Y   V  F+I   G LSA P+L   I++ +   +AD++ +KQILS 
Sbjct: 322 RSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILST 381

Query: 179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
           T  RK+ N  G    A  L+ + +     V AI+ L LA+  +    +GF  NHLD++P 
Sbjct: 382 TTVRKIMNCGGFGMEATLLLVVGYSHTRGV-AISFLVLAVGFSGFAISGFNVNHLDIAPR 440

Query: 239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298
           +A  LMG +NG   ++ ++ P+ VG  +T N S  +WQ +FLIAA + + G + + +F +
Sbjct: 441 YASILMGISNGVGTLSGMVCPIIVG-AMTKNKSREEWQYVFLIAALVHYGGVIFYALFAS 499

Query: 299 SEVQPWNDSEYDGDKK 314
            E QPW D E   ++K
Sbjct: 500 GEKQPWADPEETSEEK 515

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also play a role in the endocrine glutamatergic system of other tissues such as pineal gland and pancreas. May also mediate the transport of inorganic phosphate.

Rattus norvegicus (taxid: 10116)

>sp|Q9NRA2|S17A5_HUMAN Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2

 Score =  236 bits (601), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 193/313 (61%), Gaps = 4/313 (1%)

Query: 2   SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61
           S WAPP+ER++L S +++G Q G +++LP++G++      W  +FY  G + I W   W 
Sbjct: 187 SSWAPPLERSKLLSISYAGAQLGTVISLPLSGIIC-YYMNWTYVFYFFGTIGIFWFLLWI 245

Query: 62  YIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNW 121
           ++ +++P +H  IS  E+ YI +SL   + +SS   VPW  IL SLP+WA+++ H   NW
Sbjct: 246 WLVSDTPQKHKRISHYEKEYILSSL--RNQLSSQKSVPWVPILKSLPLWAIVVAHFSYNW 303

Query: 122 GYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVS 181
            ++TLLT +P+Y+  +L+F+++ NGFLS+ PYL  W+ +++    AD + AK   S    
Sbjct: 304 TFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADNLRAKWNFSTLCV 363

Query: 182 RKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG 241
           R++++ IG+ G A  LV   F+G +   A+  LT++  +     +GF  NHLD++P++AG
Sbjct: 364 RRIFSLIGMIGPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAG 423

Query: 242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV 301
            L+G TN  A I  ++GP+    +  DNT V +WQT+F IAAAI  FG + F +F   EV
Sbjct: 424 ILLGITNTFATIPGMVGPVIAKSLTPDNT-VGEWQTVFYIAAAINVFGAIFFTLFAKGEV 482

Query: 302 QPWNDSEYDGDKK 314
           Q W  +++ G + 
Sbjct: 483 QNWALNDHHGHRH 495

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.

Homo sapiens (taxid: 9606)

>sp|Q8BLE7|VGLU2_MOUSE Vesicular glutamate transporter 2 OS=Mus musculus GN=Slc17a6 PE=1 SV=1

 Score =  236 bits (601), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 120/316 (37%), Positives = 190/316 (60%), Gaps = 6/316 (1%)

Query: 2   SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61
           SKWAPP+ER+RL + +F G+  G ++ +P+AG+L     GW S+FYV G+  +VW   W 
Sbjct: 203 SKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQYT-GWSSVFYVYGSFGMVWYMFWL 261

Query: 62  YIGANSPAQHPFISLEERIYIETSLVHSSTVSSSM---KVPWKAILTSLPVWAVLITHLC 118
            +   SPA+HP I+ EER YIE S+  S+ +  +M   K PW+   TS+PV+A+++ + C
Sbjct: 262 LVSYESPAKHPTITDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFC 321

Query: 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
           ++W ++ LL   P+Y   V  F+I   G LSA P+L   I++ +   +AD++ +KQILS 
Sbjct: 322 RSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILST 381

Query: 179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
           T  RK+ N  G    A  L+ + +     V AI+ L LA+  +    +GF  NHLD++P 
Sbjct: 382 TTVRKIMNCGGFGMEATLLLVVGYSHTRGV-AISFLVLAVGFSGFAISGFNVNHLDIAPR 440

Query: 239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298
           +A  LMG ++G   ++ ++ P+ VG  +T N S  +WQ +FLIAA + + G + + +F +
Sbjct: 441 YASILMGISDGVGTLSGMVCPIIVG-AMTKNKSREEWQYVFLIAALVHYGGVIFYALFAS 499

Query: 299 SEVQPWNDSEYDGDKK 314
            E QPW D E   ++K
Sbjct: 500 GEKQPWADPEETSEEK 515

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.

Mus musculus (taxid: 10090)

>sp|Q1L8X9|VGLU3_DANRE Vesicular glutamate transporter 3 OS=Danio rerio GN=slc17a8 PE=3 SV=2

 Score =  234 bits (596), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 121/316 (38%), Positives = 187/316 (59%), Gaps = 6/316 (1%)

Query: 2   SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61
           SKWAPP+ER+RL + +F G+  G ++ +P+AG+L     GWPS+FY+ G   I+W   W 
Sbjct: 208 SKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILV-QYVGWPSVFYIYGVFGIIWYIFWI 266

Query: 62  YIGANSPAQHPFISLEERIYIETSLVHSSTVSSS---MKVPWKAILTSLPVWAVLITHLC 118
            +  NSPA HP IS EER YIETS+   + + SS    K PW+   TS+PV+A+++ + C
Sbjct: 267 LLAYNSPAVHPTISEEERNYIETSIGEGANLMSSTEKFKTPWREFFTSMPVYAIIVANFC 326

Query: 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
           ++W ++ LL   P+Y   V  F I   G LSA P++   I++ +   LAD++ +++ILS 
Sbjct: 327 RSWTFYLLLISQPAYFEEVFGFPISKVGILSAVPHMVMTIIVPIGGQLADFLRSRKILST 386

Query: 179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
           T  RK+ N  G    A  L+ + F     V AI+ L LA+  +    +GF  NHLD++P 
Sbjct: 387 TTVRKIMNCGGFGMEATLLLVVGFSHTRAV-AISFLILAVGFSGFAISGFNVNHLDIAPR 445

Query: 239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT 298
           +A  LMG +NG   ++ ++ PL VG +    T + +WQ +F+IA+ + + G + + IF +
Sbjct: 446 YASILMGISNGVGTLSGMVCPLIVGALTKHKTRL-EWQHVFVIASMVHYTGVIFYAIFAS 504

Query: 299 SEVQPWNDSEYDGDKK 314
            E Q W D E   D+K
Sbjct: 505 GEKQDWADPENTSDEK 520

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	318
328717283	465	PREDICTED: putative inorganic phosphate	0.996	0.681	0.550	1e-99
332027316	493	Putative inorganic phosphate cotransport	0.996	0.643	0.5	2e-89
157115851	485	sodium-dependent phosphate transporter [	0.993	0.651	0.5	7e-89
158299588	438	AGAP008931-PA [Anopheles gambiae str. PE	0.965	0.700	0.514	5e-88
328790544	477	PREDICTED: putative inorganic phosphate	0.993	0.662	0.493	6e-88
380023205	478	PREDICTED: putative inorganic phosphate	0.993	0.661	0.495	4e-87
307180242	491	Putative inorganic phosphate cotransport	0.993	0.643	0.515	3e-86
312384018	490	hypothetical protein AND_02685 [Anophele	0.965	0.626	0.498	7e-85
170036095	483	sodium-dependent phosphate transporter [	0.977	0.643	0.498	8e-85
350420904	479	PREDICTED: putative inorganic phosphate	0.993	0.659	0.504	1e-83

>gi|328717283|ref|XP_001951143.2| PREDICTED: putative inorganic phosphate cotransporter-like [Acyrthosiphon pisum]

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 175/318 (55%), Positives = 227/318 (71%), Gaps = 1/318 (0%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           +SKWAP  E+ RL SF FSGTQFG+LV LP AGLLA S  GWP+IFYV GA  +VW   W
Sbjct: 146 LSKWAPASEKGRLISFVFSGTQFGSLVMLPTAGLLASSSGGWPAIFYVGGAFTLVWVLVW 205

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQN 120
             +GANSP++H  IS  E+ +I  SL  ++T +  ++ PW  I TS+P+W ++I HL QN
Sbjct: 206 SLMGANSPSEHQTISDSEKKFIINSL-SNTTSNKPLQTPWGKIFTSIPMWTLIIAHLTQN 264

Query: 121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTV 180
            G+W LLT MP+YIN +L+FDIKSNGFLSA PYL  WILI+ FSW++DYI    +++ T 
Sbjct: 265 LGFWILLTNMPTYINYILKFDIKSNGFLSAMPYLIMWILIIAFSWISDYIRTHGLITNTN 324

Query: 181 SRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFA 240
            RK+WNT+  WG A AL+ L     +  GAI  LT A+ +N+G YTGFL+NHLDL+PNFA
Sbjct: 325 QRKIWNTLAHWGGALALLSLYLFDTSTTGAIVLLTAALGLNSGVYTGFLTNHLDLAPNFA 384

Query: 241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300
           GTL+G TN  ANI SILGPL VGF+VTDN +  QW  +FL +A++FF GNL+++IFGT++
Sbjct: 385 GTLLGITNSIANITSILGPLLVGFVVTDNCNKDQWGIVFLCSASVFFIGNLLYVIFGTAD 444

Query: 301 VQPWNDSEYDGDKKKSRK 318
            QPWND+  +   K    
Sbjct: 445 TQPWNDTSINNKIKNGEN 462

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027316|gb|EGI67400.1| Putative inorganic phosphate cotransporter [Acromyrmex echinatior]

 Score =  335 bits (859), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 162/324 (50%), Positives = 219/324 (67%), Gaps = 7/324 (2%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           ++KWAPP ERARL +FA++G QFG ++ +P+AG+LA S  GWPSIFY+ G ++I+W+  +
Sbjct: 163 LAKWAPPDERARLGTFAYAGGQFGTVIAMPIAGVLAESSAGWPSIFYLFGTLSIIWSVVY 222

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSS-----TVSSSMKVPWKAILTSLPVWAVLIT 115
            Y+GA++P+ H  IS EER+YIE  L  +       V   MK PWKA+ TS+P+WA++I 
Sbjct: 223 YYLGADAPSNHRSISQEERMYIEEQLRTTEAKSDDEVKKKMKTPWKAMFTSVPMWALIIV 282

Query: 116 HLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQI 175
           H  QNWGYWTLLTE+PSY+  VL F +++ G  SA PYLA WIL    SW +DY + K +
Sbjct: 283 HCGQNWGYWTLLTEIPSYMTGVLNFKVQAGGIFSALPYLAMWILSFPMSWFSDYALKKNV 342

Query: 176 LSPTVSRKMWNTIGLWGSAAALVGLSFV-GDNLVGAITCLTLAIAINAGTYTGFLSNHLD 234
            S  V RK+ NT+  WG A AL  +S    D+   A+  L +A+ +NAG+  GF  NH+D
Sbjct: 343 -SRAVVRKVSNTVAHWGPAIALACMSLAPTDDYTWAVVILVIAVGLNAGSLCGFQINHID 401

Query: 235 LSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294
           LSPNFAGT+M  TN CA + SI+ PL  G IV+D +S  QW  +F ++AAI+F GNL+F+
Sbjct: 402 LSPNFAGTMMSVTNCCATVISIIAPLISGVIVSDESSAFQWNIVFYVSAAIYFLGNLVFV 461

Query: 295 IFGTSEVQPWNDSEYDGDKKKSRK 318
           IFG  EVQ WND E     KK R+
Sbjct: 462 IFGKGEVQWWNDPEAQPPTKKLRR 485

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157115851|ref|XP_001658313.1| sodium-dependent phosphate transporter [Aedes aegypti] gi|108883483|gb|EAT47708.1| AAEL001209-PA [Aedes aegypti]

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 159/318 (50%), Positives = 215/318 (67%), Gaps = 2/318 (0%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           +SKWAP  ER RL ++ ++G QFG ++ L  +G LA S  GWP IFYVSGA  I W  AW
Sbjct: 152 LSKWAPVSERGRLGTYCYAGAQFGTVIMLASSGFLASSSIGWPGIFYVSGAAGIAWTVAW 211

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQN 120
            + G NSP +H  IS EER +IE+SL +    S  +  PWKAI TS P+ A+ I H   N
Sbjct: 212 FFFGGNSPVEHGSISAEERDFIESSLGNQDH-SKKIITPWKAIFTSAPMIALTIAHCSHN 270

Query: 121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTV 180
           WG+WTLLTEMP+++ +VL  DIKSN  LS+ PYL  W+L +VFS ++D+++ +Q LS   
Sbjct: 271 WGFWTLLTEMPTFMKNVLDLDIKSNALLSSLPYLVMWVLSMVFSPISDFLINRQYLSRVT 330

Query: 181 SRKMWNTIGLWGSAAALVGLSFVGDNLVG-AITCLTLAIAINAGTYTGFLSNHLDLSPNF 239
           SRK++NTIGLW    AL+GL+FV    +  A+  LT+A+ IN+ TY GF  NH+DL+PN 
Sbjct: 331 SRKLFNTIGLWIPMGALLGLAFVPKGEIDLAVALLTMAVGINSATYLGFQVNHIDLAPNH 390

Query: 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299
           AGT+MG TN  ANI SI+ PL VG ++ D T   QW+T+F IAA I+FFGNL+F++ G +
Sbjct: 391 AGTMMGITNCAANIMSIIAPLLVGLVLQDATDPVQWRTVFYIAAGIYFFGNLVFIVLGKA 450

Query: 300 EVQPWNDSEYDGDKKKSR 317
           ++QPWN+   D     + 
Sbjct: 451 DIQPWNEPRPDKKDDDNE 468

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158299588|ref|XP_319685.4| AGAP008931-PA [Anopheles gambiae str. PEST] gi|157013589|gb|EAA14814.5| AGAP008931-PA [Anopheles gambiae str. PEST]

 Score =  330 bits (846), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 159/309 (51%), Positives = 217/309 (70%), Gaps = 2/309 (0%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           +S+WAP  ER RL + +++G QFG ++ L V+G+LA S  GWPSIFY+SGAV ++W+ AW
Sbjct: 100 LSRWAPASERGRLGTLSYAGAQFGTVIMLAVSGVLASSSMGWPSIFYISGAVGMLWSVAW 159

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQN 120
            + G+NSPA +  I+ EER +IE+S       S  +  PW AILTS P+ A+ + H C N
Sbjct: 160 FFYGSNSPADYRGIAPEEREFIESSF-GPQDHSRRIVTPWVAILTSAPMIALTVAHCCHN 218

Query: 121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTV 180
           WG+WTLLTEMP+++  VL+ DIK N  LS+ PYL  W+L  VFS L+D+++ +Q LS   
Sbjct: 219 WGFWTLLTEMPTFMKEVLEMDIKKNALLSSLPYLVMWMLSFVFSPLSDFLINRQYLSRVA 278

Query: 181 SRKMWNTIGLWGSAAALVGLSFVGDNLVG-AITCLTLAIAINAGTYTGFLSNHLDLSPNF 239
           SRK++NTIGLW    AL+GL+FV       AI  LTLA+ IN+ TY GF  NH+DL+PN 
Sbjct: 279 SRKLFNTIGLWVPMVALLGLAFVPKGSSDLAIVLLTLAVGINSATYLGFQVNHIDLAPNH 338

Query: 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299
           AGT+MG TN  ANI SI+ PL VG +++D T   QW+ +F IAA ++FFGNL F+IFG +
Sbjct: 339 AGTMMGITNCAANIMSIIAPLIVGQVISDATDPIQWRRVFYIAAGVYFFGNLTFIIFGKA 398

Query: 300 EVQPWNDSE 308
           ++QPWN+ E
Sbjct: 399 DIQPWNEPE 407

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328790544|ref|XP_624251.3| PREDICTED: putative inorganic phosphate cotransporter-like [Apis mellifera]

 Score =  330 bits (845), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 160/324 (49%), Positives = 226/324 (69%), Gaps = 8/324 (2%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           +SKWAPP ERARL + A++G QFG ++  P++GLLA S  GWPSIFYV GA+A++W   +
Sbjct: 151 LSKWAPPTERARLGTLAYAGAQFGTVICFPISGLLASSSAGWPSIFYVFGALAVIWGVVF 210

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSS----TVSSSMKVPWKAILTSLPVWAVLITH 116
              G++SP++H  IS +ER YIE SL  S     +  ++MK PWKAI TS+P+WA++I H
Sbjct: 211 FVFGSDSPSKHSRISEKERRYIENSLKSSEEEKPSNETAMKTPWKAIFTSVPMWALIIVH 270

Query: 117 LCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL 176
             QNWGYWTL+TE+P+Y+N VL++++  NG +SA PYL  WIL     WLADY + K I 
Sbjct: 271 CGQNWGYWTLITELPTYMNDVLEYNLVDNGMISALPYLVMWILSFPVCWLADYALKKGI- 329

Query: 177 SPTVSRKMWNTIGLWGSAAALVGLSF--VGDNLVGAITCLTLAIAINAGTYTGFLSNHLD 234
           S  + RK+ NTI  WG A AL+ L+   V D+ V A+  L +A+ +NAG+  GF  NH+D
Sbjct: 330 SAGIIRKLCNTIAHWGPAIALICLAAMSVQDHKV-AVIILVIAVGLNAGSLCGFQINHID 388

Query: 235 LSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL 294
           LSPNFAG +M  TN  A++ +I+ P+  G IVT   +V+QW  +F ++AAI+F GNLIF+
Sbjct: 389 LSPNFAGRMMSITNCIASVVAIIAPMVCGLIVTQKKNVTQWNIVFYLSAAIYFLGNLIFI 448

Query: 295 IFGTSEVQPWNDSEYDGDKKKSRK 318
           IFG++E+QPWN+ +    +K++ K
Sbjct: 449 IFGSTEIQPWNNPKTANLQKRNDK 472

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380023205|ref|XP_003695416.1| PREDICTED: putative inorganic phosphate cotransporter-like [Apis florea]

 Score =  327 bits (839), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 161/325 (49%), Positives = 222/325 (68%), Gaps = 9/325 (2%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           +SKWAPP ERARL + A++G QFG ++  P++GLLA S  GWPSIFYV GA+A++W   +
Sbjct: 151 LSKWAPPTERARLGTLAYAGAQFGTVICFPISGLLASSSAGWPSIFYVFGALAVIWGVIF 210

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSS-----TVSSSMKVPWKAILTSLPVWAVLIT 115
              G++SPA+H  IS  ER YIE SL  S      +  ++M+ PWKAI TS+P+WA++I 
Sbjct: 211 FVFGSDSPAKHSRISERERRYIENSLKSSEEKEKPSNETAMRTPWKAIFTSVPMWALIIV 270

Query: 116 HLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQI 175
           H  QNWGYWTL+TE+P+Y+N VL++ +  NG +SA PYL  WIL     WLADY + K I
Sbjct: 271 HCGQNWGYWTLITELPTYMNEVLEYKLVDNGIISALPYLVMWILSFPVCWLADYALKKGI 330

Query: 176 LSPTVSRKMWNTIGLWGSAAALVGLSF--VGDNLVGAITCLTLAIAINAGTYTGFLSNHL 233
            S  V RK  NTI  WG A AL+ L+   V D+ V A+  L +A+ +NAG+  GF  NH+
Sbjct: 331 -SAGVIRKFCNTIAHWGPAIALICLAAMSVQDHKV-AVIILVIAVGLNAGSLCGFQINHI 388

Query: 234 DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIF 293
           DLSPNFAG +M  TN  A++ +I+ P+  G IVT   S++QW  +F ++AAI+  GNLIF
Sbjct: 389 DLSPNFAGRMMSITNCIASVVAIIAPMVCGLIVTQKKSITQWNIVFYLSAAIYILGNLIF 448

Query: 294 LIFGTSEVQPWNDSEYDGDKKKSRK 318
           +IFG++E+QPWN+ +    +K+S K
Sbjct: 449 IIFGSTEIQPWNNPKPANLEKRSDK 473

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180242|gb|EFN68275.1| Putative inorganic phosphate cotransporter [Camponotus floridanus]

 Score =  324 bits (831), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 167/324 (51%), Positives = 217/324 (66%), Gaps = 8/324 (2%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           +SKWAPP ERARL +FA++G QFG L+ +PV+G LA S  GWPSIFY+ G +AIVW+  +
Sbjct: 164 LSKWAPPSERARLGTFAYAGAQFGTLIAMPVSGFLAASSLGWPSIFYIFGTLAIVWSIVF 223

Query: 61  CYIGANSPAQHPFISLEERIYIETSL----VHSSTVSSSMKVPWKAILTSLPVWAVLITH 116
            Y GANSPA+H  IS +ER YIE SL     +    S  ++ PW+ + TS PV A+ + H
Sbjct: 224 FYFGANSPAEHRSISPKERKYIEDSLKTIETNDENKSKKLRTPWREMFTSAPVLALGVAH 283

Query: 117 LCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL 176
             QNWGYWTLLTEMPSY+ SV++ +I+ +G  SA PYL  W+L    SW +DY + K + 
Sbjct: 284 CSQNWGYWTLLTEMPSYMTSVMK-NIEMSGVYSALPYLVMWLLSFPMSWFSDYALKKGMS 342

Query: 177 SPTVSRKMWNTIGLWGSAAALVGLSFV-GDNLVGAITCLTLAIAINAGTYTGFLSNHLDL 235
             TV RK  NT+  WG A AL  +S V  D+ + AI   T+A+ +NAG+  G+  NH+DL
Sbjct: 343 KGTV-RKTSNTVAFWGPAVALAFMSLVPTDDYIWAIVIFTIAVGLNAGSLCGYQINHIDL 401

Query: 236 SPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLI 295
           SPNFAGT+M  TN  A I +I+ PL VG IVTD ++V QW  +F IAAAIFF GNLIF+I
Sbjct: 402 SPNFAGTMMSVTNCVATITAIIAPLIVGIIVTDESNVYQWNIVFYIAAAIFFLGNLIFVI 461

Query: 296 FGTSEVQPWND-SEYDGDKKKSRK 318
           FG  E+Q WN+  E    +KK  K
Sbjct: 462 FGKGEIQWWNNFEEVQALRKKKDK 485

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312384018|gb|EFR28855.1| hypothetical protein AND_02685 [Anopheles darlingi]

 Score =  320 bits (819), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 154/309 (49%), Positives = 212/309 (68%), Gaps = 2/309 (0%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           +S+WAP  ER RL + +++G QFG ++ L V+G+LA S  GWP IFY+SGA  + W+ AW
Sbjct: 170 LSRWAPASERGRLGTLSYAGAQFGTVIMLAVSGVLASSSLGWPGIFYISGAAGLAWSVAW 229

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQN 120
            + G+NSPA +  I+ EER +IE+S       S  +  PW AILTS P+ A+ I H   N
Sbjct: 230 FFYGSNSPADYRGIAPEEREFIESSF-GPQDHSRRIVTPWAAILTSAPMIALTIAHSSHN 288

Query: 121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTV 180
           WG+WTLLTEMP+Y+  VL+ DIK N  LS+ PYL  W+L  VFS L+D+++ +  LS   
Sbjct: 289 WGFWTLLTEMPTYMKEVLEKDIKKNALLSSLPYLVMWMLSFVFSPLSDFLINRNYLSRVT 348

Query: 181 SRKMWNTIGLWGSAAALVGLSFVGDNLVG-AITCLTLAIAINAGTYTGFLSNHLDLSPNF 239
            RK++NTIGLW    AL+GL+FV       A+  LTLA+ IN+ TY GF  NH+DL+PN 
Sbjct: 349 GRKLFNTIGLWIPMVALLGLAFVPKGSSDLAVVLLTLAVGINSATYLGFQVNHIDLAPNH 408

Query: 240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS 299
           AGT+MG TN  ANI SI+ PL VG ++TD +   QW+ +F IAA ++FFGNLIF++FG +
Sbjct: 409 AGTMMGITNCAANIMSIIAPLIVGEVITDASDPIQWRRVFYIAAGVYFFGNLIFIVFGKA 468

Query: 300 EVQPWNDSE 308
           ++QPWN+ +
Sbjct: 469 DIQPWNEPQ 477

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170036095|ref|XP_001845901.1| sodium-dependent phosphate transporter [Culex quinquefasciatus] gi|167878592|gb|EDS41975.1| sodium-dependent phosphate transporter [Culex quinquefasciatus]

 Score =  320 bits (819), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 158/317 (49%), Positives = 216/317 (68%), Gaps = 6/317 (1%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           +SKWAP  ER  L ++ ++G QFG +V L V+G+LA S  GWPSIFY+SGA   +W+  W
Sbjct: 153 LSKWAPVSERGTLGTYCYAGAQFGTVVMLAVSGVLAASSMGWPSIFYISGAAGCIWSVLW 212

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQN 120
            + G+NSP +H  IS EER +IE+SL +    S  +  PW AI TS P+ A+++ H   N
Sbjct: 213 FFFGSNSPVEHRSISPEERNFIESSLGNQDH-SKKIVTPWMAIFTSAPMIALIVAHCSHN 271

Query: 121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTV 180
           WG+WTLLT+MP+Y+ SVL  DIK N  LS+ PYLA WIL  VFS ++D+++ +Q LS  V
Sbjct: 272 WGFWTLLTQMPTYMKSVLGLDIKKNALLSSLPYLAMWILSFVFSPISDFLINRQYLSRVV 331

Query: 181 SRKMWNTIGLWGSAAALVGLSFV---GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP 237
            RK++N+IGLW    AL+GL+FV   G +L  AI  LT+A+ IN+ TY GF  NH+DL+P
Sbjct: 332 CRKLFNSIGLWIPMCALLGLAFVPKGGTDL--AIALLTVAVGINSATYLGFQVNHIDLAP 389

Query: 238 NFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG 297
           N AGT+MG TN  ANI SI+ PL VG ++TD     QW+T+F IAAA++  GNL+F+  G
Sbjct: 390 NHAGTMMGITNCAANIMSIIAPLIVGEVLTDEKDPIQWRTVFYIAAAVYCVGNLVFVTLG 449

Query: 298 TSEVQPWNDSEYDGDKK 314
            +E+Q WN+     D +
Sbjct: 450 KAEIQSWNEPRNASDSE 466

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420904|ref|XP_003492669.1| PREDICTED: putative inorganic phosphate cotransporter-like [Bombus impatiens]

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/325 (50%), Positives = 223/325 (68%), Gaps = 9/325 (2%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           +SKWAPP ERARL + A++G QFG ++  P++G LA S  GWPS+FY  G +AI+WA  +
Sbjct: 152 LSKWAPPSERARLGTLAYAGAQFGTVICFPISGELAASSIGWPSVFYTFGVLAIIWAIVF 211

Query: 61  CYIGANSPAQHPFISLEERIYIETSLV-----HSSTVSSSMKVPWKAILTSLPVWAVLIT 115
            + G++SP++H  IS++ER YIE SL        S   +++K PWKAILTS+P+WA++I 
Sbjct: 212 FFFGSDSPSKHSGISVKERRYIEDSLKTPGDKEKSDNKTALKTPWKAILTSVPMWALIIV 271

Query: 116 HLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQI 175
           H  QNWGYWTL+TE+P Y+N++LQF ++ NG++SA PYL  WIL     WLADY + K I
Sbjct: 272 HCGQNWGYWTLITELPIYMNNILQFKLEENGWISALPYLTMWILSFPTCWLADYALKKNI 331

Query: 176 LSPTVSRKMWNTIGLWGSAAALV--GLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHL 233
            S  V RK+ NTI  WG A AL+  G   V D  V A T L +A+ +NAG+ +GF  NH+
Sbjct: 332 -SRGVIRKVCNTIAHWGPAIALICLGTMSVHDATV-ATTILVIAVGLNAGSLSGFQINHI 389

Query: 234 DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIF 293
           DLSPNFAGTLM  TN  A+I +I+ P+  G I  D   V+QW  +F ++AAI+  GNLIF
Sbjct: 390 DLSPNFAGTLMSITNCIASIIAIIAPIVCGIIAQDEKDVTQWNIVFYLSAAIYILGNLIF 449

Query: 294 LIFGTSEVQPWNDSEYDGDKKKSRK 318
           +IFG++E+QPWN+ E    K +S K
Sbjct: 450 IIFGSTEIQPWNNPEITNIKGQSEK 474

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	318
FB|FBgn0034392	497	MFS15 "Major Facilitator Super	0.959	0.613	0.441	2.7e-68
FB|FBgn0034394	491	CG15096 [Drosophila melanogast	0.959	0.621	0.428	2.5e-65
FB|FBgn0024315	529	Picot "Picot" [Drosophila mela	0.981	0.589	0.381	9e-61
FB|FBgn0033234	477	CG8791 [Drosophila melanogaste	0.959	0.639	0.403	6.4e-60
UNIPROTKB|O61369	483	Picot "Putative inorganic phos	0.981	0.645	0.378	1.3e-59
FB|FBgn0050272	497	CG30272 [Drosophila melanogast	0.987	0.631	0.406	2.5e-58
FB|FBgn0010651	497	l(2)08717 "lethal (2) 08717" [	0.971	0.621	0.386	3.2e-58
FB|FBgn0034783	485	CG9825 [Drosophila melanogaste	0.971	0.637	0.385	8.4e-58
UNIPROTKB|Q5ZL94	484	SLC17A5 "Uncharacterized prote	0.955	0.628	0.357	8.6e-56
FB|FBgn0030452	559	MFS10 "Major Facilitator Super	0.691	0.393	0.331	1.3e-55

FB|FBgn0034392 MFS15 "Major Facilitator Superfamily Transporter 15" [Drosophila melanogaster (taxid:7227)]

 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 139/315 (44%), Positives = 187/315 (59%)

Query:     1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
             +SKWAP  ER RL  + +SG+QFG +V L V+G +A S  GWPS FY+ G V IVW+  W
Sbjct:   154 LSKWAPAEERGRLVGYTYSGSQFGTVVMLSVSGYIASSSLGWPSTFYIPGCVGIVWSFVW 213

Query:    61 CYIGANSPAQHPFISLEERIYIEXXXXXXXXXXXXMK------VPWKAILTSLPVWAVLI 114
              Y+ +++PAQHP I+  ER +IE             +       PW  I TS+P   +++
Sbjct:   214 LYLCSSTPAQHPTITPNERRFIESSGQARRPSDAGREEQPRPPTPWWRIFTSVPFLVLVL 273

Query:   115 THLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQ 174
              H   NWG+WTLLTE+P+++ +VL  DIK+NG LSA PY A  +L  VF WL+D +  + 
Sbjct:   274 AHCANNWGFWTLLTEIPTFMKNVLGMDIKNNGPLSALPYFAMILLTCVFIWLSDTLKQRG 333

Query:   175 ILSPT-VSRKMWNTIGLWGSAAALVGLSFV--GD-NLVGAITCLTLAIAINAGTYTGFLS 230
              + P   SRK +NT+G+W    AL+GL ++  G+ N+  AI  LT A+A N+ TY GF  
Sbjct:   334 TVIPLGFSRKFFNTLGMWLPMLALIGLGYITEGEANVRLAIGLLTAAVATNSATYLGFHV 393

Query:   231 NHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTXXXXXXXXXXXXX 290
             NH+DLSPN+AGTLMG TN  AN  SIL PL VG IV D T+ +QW+              
Sbjct:   394 NHIDLSPNYAGTLMGITNCAANFMSILAPLIVGLIVWDETNPAQWRIVFFFTAFVYFIGN 453

Query:   291 XXXXXXXTSEVQPWN 305
                     + VQPWN
Sbjct:   454 LLFMLFGRTRVQPWN 468

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0006817 "phosphate ion transport" evidence=ISS

GO:0006814 "sodium ion transport" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

FB|FBgn0034394 CG15096 [Drosophila melanogaster (taxid:7227)]

 Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
 Identities = 134/313 (42%), Positives = 182/313 (58%)

Query:     1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
             +S+WAPP ERA L + A+SG QFG ++ L  +G++A SP GWPSIFY+SG +  VW+  +
Sbjct:   163 LSQWAPPKERATLGTCAYSGNQFGTILMLATSGVIAASPIGWPSIFYISGGIGCVWSVVY 222

Query:    61 CYIGANSPAQHPFISLEERIYIEXXXXXXXXXXXX-----MKVPWKAILTSLPVWAVLI- 114
              + GA SP +   IS EE+  IE                 +  PW +  TS P + VLI 
Sbjct:   223 FFFGAGSPQECKSISAEEKKLIEMSQADEVSGGQEQPKEQLPTPWLSFFTS-PAFLVLIV 281

Query:   115 THLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQ 174
             +H   NWG+WTLLTE+PSY+ ++L  DIKSN  LS+ PY+  + +  VFS ++  +  + 
Sbjct:   282 SHSVHNWGFWTLLTEIPSYMKNILGKDIKSNALLSSLPYVCMFAMSFVFSSISAQLNNRN 341

Query:   175 ILSPTVSRKMWNTIGLWGSAAALVGLSFVG-DNLVGAITCLTLAIAINAGTYTGFLSNHL 233
              +S + SRK++N+IGLW     LVGL +V  D    A+  L   + +N  TY GF +NH+
Sbjct:   342 CISRSTSRKLFNSIGLWIPMVTLVGLGYVNPDQSELAVVLLCFTVGMNGATYLGFNTNHI 401

Query:   234 DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTXXXXXXXXXXXXXXXX 293
             DLSPNFAG LMG TNG ANI SI+ PL VGFIVT+     QW+                 
Sbjct:   402 DLSPNFAGILMGITNGVANIMSIIAPLIVGFIVTNEHDPEQWRIVFFIAAGFYLVGNTLY 461

Query:   294 XXXXTSEVQPWND 306
                  + VQPWND
Sbjct:   462 VIFGKANVQPWND 474

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

FB|FBgn0024315 Picot "Picot" [Drosophila melanogaster (taxid:7227)]

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 121/317 (38%), Positives = 184/317 (58%)

Query:     1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA--GSPWGWPSIFYVSGAVAIVWAA 58
             ++KW PP ER+R+ +  ++G QFG ++++P++GLLA  G   GWPSIFYV G V  VW+ 
Sbjct:   187 LAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSI 246

Query:    59 AWCYIGANSPAQHPFISLEERIYIEXXXXXXXXXXXXMKVPWKAILTSLPVWAVLITHLC 118
             A+       P+ HP I   E+ YI               +P+KAI+ SLP +A+L  H+ 
Sbjct:   247 AFLIFVHEDPSSHPTIDEREKKYINDSLWGTDVVKSP-PIPFKAIIKSLPFYAILFAHMG 305

Query:   119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
              N+GY TL+TE+P+Y+  VL+F +KSNG LS+ PYLA W+  +  S +AD++++ +  S 
Sbjct:   306 HNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMISSKRFSH 365

Query:   179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
             T +RK+ N+IG +G   AL+  S+ G +    +  LT+ + +N G Y+GF  NHLDL+P 
Sbjct:   366 TATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPR 425

Query:   239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTS--VSQWQTXXXXXXXXXXXXXXXXXXX 296
             FAG LM  TN  AN+A +L P+  G +++D +   + QWQ                    
Sbjct:   426 FAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYIICGTFYNIF 485

Query:   297 XTSEVQPWNDSEYDGDK 313
              + E Q W++ E D  K
Sbjct:   486 GSGERQYWDNPEDDEQK 502

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=NAS

GO:0006817 "phosphate ion transport" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA;NAS

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=IEA

GO:0035435 "phosphate ion transmembrane transport" evidence=IEA

FB|FBgn0033234 CG8791 [Drosophila melanogaster (taxid:7227)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 124/307 (40%), Positives = 173/307 (56%)

Query:     1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
             ++KW P  ER  L +  +SG QFG  V L  +G +  S  GWP +FY+SG +++ WA  +
Sbjct:   141 LAKWVPRTERGLLTTGVYSGAQFGTAVILVTSGFIFESSMGWPGLFYLSGGLSLAWALLF 200

Query:    61 CYIGANSPAQHPFISLEERIYIEXXXXXXXXXXXXMKVPWKAILTSLPVWAVLITHLCQN 120
              +  AN P     IS  E  YIE            M VPW +I  S   + +L  H    
Sbjct:   201 FWQAANEPVTASRISKGEVEYIESLTGSNSSSQS-MPVPWMSIFRSPAFYGLLAAHCGFT 259

Query:   121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTV 180
             WG++TLLTEMP+Y++ VLQ ++KSN FLS+ PY A  +L  V S ++D ++ +  +S T 
Sbjct:   260 WGFYTLLTEMPTYMSMVLQLNVKSNAFLSSLPYFAMGLLCFVVSPISDLLINRGTISITT 319

Query:   181 SRKMWNTIGLWGSAAALVGLSFV-GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF 239
             +RK++N+IG WG  A L+GL ++  D    AI  LTLA+ INAG   G+L NH+DLSPNF
Sbjct:   320 ARKLFNSIGQWGPMACLIGLGYMTADEKTWAILLLTLAVGINAGCSCGYLINHIDLSPNF 379

Query:   240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTXXXXXXXXXXXXXXXXXXXXTS 299
             AG +MG TNG A + SI+ PL VG IV+D    SQW+                      +
Sbjct:   380 AGPMMGVTNGIAGVTSIIAPLVVGAIVSDEEDPSQWRMVFFITGGIYLVCNTIFVIFGKA 439

Query:   300 EVQPWND 306
              +Q WN+
Sbjct:   440 TIQIWNE 446

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|O61369 Picot "Putative inorganic phosphate cotransporter" [Drosophila ananassae (taxid:7217)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 120/317 (37%), Positives = 184/317 (58%)

Query:     1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA--GSPWGWPSIFYVSGAVAIVWAA 58
             ++KW PP ER+R+ +  ++G QFG ++++P++GLLA  G   GWPSIFYV G V  VW+ 
Sbjct:   141 LAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSI 200

Query:    59 AWCYIGANSPAQHPFISLEERIYIEXXXXXXXXXXXXMKVPWKAILTSLPVWAVLITHLC 118
             A+       P+ HP I   E+ YI               +P+K+I+ SLP +A+L  H+ 
Sbjct:   201 AFLIFVYEDPSTHPKIDEREKKYINESLWGTDVIKSP-PIPFKSIVKSLPFYAILFAHMG 259

Query:   119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
              N+GY TL+TE+P+Y+  VL+F +KSNG LS+ PYLA W+L +  S +AD++++ +  S 
Sbjct:   260 HNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLLSMFISVIADWMISSKRFSL 319

Query:   179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
             T +RK+ N+IG +G   AL+  S+ G +    +  LT+ + +N G Y+GF  NHLDL+P 
Sbjct:   320 TATRKIINSIGQYGPGLALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPR 379

Query:   239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTS--VSQWQTXXXXXXXXXXXXXXXXXXX 296
             FAG LM  TN  AN+A +L P+  G +++D +   + QWQ                    
Sbjct:   380 FAGFLMSITNCSANLAGLLAPIAAGNLISDPSKPVMGQWQIVFFIAAFVYIICGTFYNIF 439

Query:   297 XTSEVQPWNDSEYDGDK 313
              + E Q W++   D  K
Sbjct:   440 GSGERQFWDNPSEDEQK 456

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=NAS

GO:0006817 "phosphate ion transport" evidence=NAS

GO:0016021 "integral to membrane" evidence=NAS

FB|FBgn0050272 CG30272 [Drosophila melanogaster (taxid:7227)]

 Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
 Identities = 132/325 (40%), Positives = 175/325 (53%)

Query:     1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
             ++ W P  ER RL + A +G   G LV +  +GLLA S  GWP IFYVS  V ++W   W
Sbjct:   141 LANWCPVKERNRLGALANTGIDCGTLVAMFASGLLAASSIGWPGIFYVSCGVGVLWCIVW 200

Query:    61 CYIGANSPAQHPFISLEERIYIEXXXXXXXXXXXX-MK------VPWKAILTSLPVWAVL 113
                GAN P +  FI   E  YIE             +K      VPWKAI TS+P WA++
Sbjct:   201 WIFGANQPRESKFIGEAELNYIETSINSSRKAEEAELKATGPIPVPWKAIWTSVPFWALM 260

Query:   114 ITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAK 173
             +T  CQ+WGY TL TEMP+Y+N VL  D+KSN   SA PYL  W++  V+  +AD ++ +
Sbjct:   261 VTRCCQSWGYSTLQTEMPAYMNGVLLMDMKSNALYSALPYLTSWVMAFVYLIIADILLTR 320

Query:   174 QILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVG--AITCLTLAIAINAGTYTGFLSN 231
              I+S T  RK  N+I  +  AAAL+G+SF+ DN     A+  +   + INAG+  G   N
Sbjct:   321 GIMSITGIRKSVNSIAFFVPAAALIGVSFL-DNTQKTLAVVLMCANVGINAGSTIGSTIN 379

Query:   232 HLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTXXXXXXXXXXXXXX 291
              +DLSPN AG LMG  N  +NI  IL PL VG IV D+    QWQ               
Sbjct:   380 TIDLSPNHAGILMGIVNTASNIVPILTPLLVGIIVKDDHDREQWQIVFIISAVIFCVGNI 439

Query:   292 XXXXXXTSEVQPWNDSEYDGDKKKS 316
                       QPW+  ++  DK++S
Sbjct:   440 VYVAFGKMVNQPWDAPDFM-DKQRS 463

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0010651 l(2)08717 "lethal (2) 08717" [Drosophila melanogaster (taxid:7227)]

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 121/313 (38%), Positives = 171/313 (54%)

Query:     1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
             ++KW+P  ER  L +  +SG QFG +V L  +G +A S  GWPSIFY+ GA   +W   W
Sbjct:   168 LAKWSPADERGMLGTLCYSGAQFGTVVMLATSGFIADSVLGWPSIFYLGGACGFIWMVFW 227

Query:    61 CYIGANSPAQHPFISLEERIYIEXXXXXXXXXXXXM--KVPWKAILTSLPVWAVLITHLC 118
                 A++P +H  IS  E  YI                  PWKAI +SLP  ++L+ H  
Sbjct:   228 YLFSASTPEEHRLISPGELKYITDSRSDGKMQSAEKLAPTPWKAIFSSLPFLSLLVVHCT 287

Query:   119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
               +GYW LL ++P+Y+  +   DIK    LS+ PY+   +L   F WL+  +  K+ +S 
Sbjct:   288 HIFGYWLLLMQIPTYMKKIYHVDIKKGALLSSLPYMVMLLLSFFFVWLSKVLQKKEGMSL 347

Query:   179 TVSRKMWNTIGLWGSAAALVGLSFV-GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP 237
             + +RK++N+IG W    +L+ L +V  DN   A+T LTL + I+  TY GF  NH+DLSP
Sbjct:   348 SFNRKIFNSIGHWIPMLSLIALGYVPADNAPLAVTLLTLTVGISGATYLGFQVNHIDLSP 407

Query:   238 NFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTXXXXXXXXXXXXXXXXXXXX 297
             N+AGTLMG TN  AN+ S + P+ VG IV D TSV++W+                     
Sbjct:   408 NYAGTLMGITNCAANVMSGIAPVIVGQIVVDETSVTEWRLVFLLAAAFYFLGNLLFVIFG 467

Query:   298 TSEVQPWNDSEYD 310
              +EVQ W DS  D
Sbjct:   468 RTEVQWW-DSPRD 479

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048190 "wing disc dorsal/ventral pattern formation" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;IMP

FB|FBgn0034783 CG9825 [Drosophila melanogaster (taxid:7227)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 120/311 (38%), Positives = 169/311 (54%)

Query:     1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
             ++KW+PP ER RL + + +G + GN+  + ++G++A S  GWP I YVS  VA  W   W
Sbjct:   141 LAKWSPPEERNRLGALSHTGIECGNVSAMFLSGMIAKSSLGWPGISYVSAGVAFFWCTLW 200

Query:    61 CYIGANSPAQHPFISLEERIYIEXXXXXXXXXXXXM-KVPWKAILTSLPVWAVLITHLCQ 119
                 AN P +  FI   E IYIE            +  +PWKAI TS P  A+LI    +
Sbjct:   201 FVFAANHPTESRFIGENELIYIESSLKHNESYHATIIPIPWKAIWTSAPFLALLIVRCAE 260

Query:   120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPT 179
             NWG  TL  E+PSY+N VL  D+KSN F SA P+LA W +  ++  +AD ++ K  +S T
Sbjct:   261 NWGLSTLQAEIPSYMNGVLDMDMKSNAFFSALPFLAMWCMSYIYLVVADVLLGKNSVSLT 320

Query:   180 VSRKMWNTIGLWGSAAALVGLSFVGDNLVG-AITCLTLAIAINAGTYTGFLSNHLDLSPN 238
             + RK +N+I  W  AA LVG+ F+       AI  +T+++ +N+    G + N +DLS N
Sbjct:   321 ILRKTYNSIAFWIPAATLVGIGFLDKEQKNFAIALMTISVGVNSAQTIGSVLNTIDLSKN 380

Query:   239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTXXXXXXXXXXXXXXXXXXXXT 298
              A  LMG  N  AN   I+ PL VG+IV +N+  SQWQ                     T
Sbjct:   381 HASILMGIVNTAANFVPIVTPLVVGWIVKENSDRSQWQIVFIIASVIFFVGNCIYLVFGT 440

Query:   299 SEVQPWNDSEY 309
             +E QPW+  +Y
Sbjct:   441 AETQPWDAEDY 451

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q5ZL94 SLC17A5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 110/308 (35%), Positives = 172/308 (55%)

Query:     2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61
             S WAPP+ER++L S +++G Q G +V+LP++GL+      W  +FY+ GA+ ++W   W 
Sbjct:   176 SSWAPPLERSKLLSISYAGAQLGTVVSLPLSGLICYY-MNWVYVFYIFGALGVLWFFFWM 234

Query:    62 YIGANSPAQHPFISLEERIYIEXXXXXXXXXXXXMKVPWKAILTSLPVWAVLITHLCQNW 121
             ++ ++ P  H  IS  ER YI               VPW+ IL SLP+WA+++ H   NW
Sbjct:   235 WLVSDKPETHKSISRIEREYI--LSSLKDQLSTQKSVPWRPILESLPLWAIVVAHFSYNW 292

Query:   122 GYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVS 181
              ++TLLT +P+Y+  +L+FD + NGFLSA PY   W+ I++   +AD++  KQ  S    
Sbjct:   293 TFYTLLTLLPTYMKEILRFDAQENGFLSALPYFGCWLCIILSGQIADHLREKQNFSTVCV 352

Query:   182 RKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG 241
             RK +  IG+ G A  LV   F+G N   A+  +T++  +     +G+  NHLD++P++AG
Sbjct:   353 RKCFTLIGMIGPAVFLVAAGFIGCNYELAVAFVTISTTLGGFCTSGYSINHLDIAPSYAG 412

Query:   242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTXXXXXXXXXXXXXXXXXXXXTSEV 301
              L+G TN  A I  ++GP+ +   +T N +V +WQT                    + EV
Sbjct:   413 ILLGITNSFATIPGMVGPV-IAKNLTHNNTVGEWQTVFYIAASINLFGAIFFALFASGEV 471

Query:   302 QPWNDSEY 309
             Q W  S Y
Sbjct:   472 QDWAVSGY 479

GO:0016021 "integral to membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

FB|FBgn0030452 MFS10 "Major Facilitator Superfamily Transporter 10" [Drosophila melanogaster (taxid:7227)]

 Score = 396 (144.5 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
 Identities = 73/220 (33%), Positives = 120/220 (54%)

Query:    98 VPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQW 157
             +PW ++LTS+P+WA+L+T   Q W ++T LTE+P+Y++++L FDI+SN  L+A PYL  W
Sbjct:   339 IPWSSLLTSVPLWAILLTQCGQGWAFYTQLTELPTYMSNILHFDIQSNALLNAVPYLTSW 398

Query:   158 ILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLA 217
              + +  S LAD+++A++ +S   S K+WNT+     +  L+G+ +VG + V     L   
Sbjct:   399 FVGIACSALADWMLARRYISLLNSYKLWNTVASVVPSLGLIGIIYVGCDWVWVTFMLAGV 458

Query:   218 IAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQT 277
              +     Y G   NH+ LSP +AGT+ G TN  ANI   L P  +G I+    +++QW  
Sbjct:   459 GSFGGAVYAGNQMNHIALSPRYAGTMYGITNSAANICGFLAPYVIGLIINHRETLTQWHL 518

Query:   278 XXXXXXXXXXXXXXXXXXXXTSEVQPWNDSEYDGDKKKSR 317
                                 ++E Q W+ +    + +  R
Sbjct:   519 VFWLAAGLNIAGNFIYLIFASAEEQSWSKTPPTRNSRSQR 558

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BN82	S17A5_MOUSE	No assigned EC number	0.3833	0.9716	0.6242	yes	N/A
Q03567	YLD2_CAEEL	No assigned EC number	0.3729	0.9402	0.6064	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	318
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	4e-73
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	1e-20
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	1e-12
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	4e-12
TIGR00881	379	TIGR00881, 2A0104, phosphoglycerate transporter fa	2e-07
COG2814	394	COG2814, AraJ, Arabinose efflux permease [Carbohyd	5e-05
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	8e-05
COG2271	448	COG2271, UhpC, Sugar phosphate permease [Carbohydr	0.002

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score =  232 bits (594), Expect = 4e-73
 Identities = 117/308 (37%), Positives = 165/308 (53%), Gaps = 2/308 (0%)

Query: 3   KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCY 62
           KWAPP ER+RL   + SG Q G  + LP++G L  S  GWP IFYV G V   W+  W  
Sbjct: 158 KWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFV 217

Query: 63  IGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWG 122
             A+ P+ HP IS  E+ YI +SL      S+   +P KAI  SLPVWA+        W 
Sbjct: 218 FPADDPSIHPCISKFEKKYINSSLQ-GQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWL 276

Query: 123 YWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSR 182
           Y  L T +P++I+ VL+   K NG LS+ PYL  W+  +   +LAD++ + + LS T +R
Sbjct: 277 YTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAAR 336

Query: 183 KMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGT 242
           K++N IG  G       L ++       I  LTLA A+++G   G L N LDL+P F G 
Sbjct: 337 KIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGF 396

Query: 243 LMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ 302
           + G T     I  ++     G I++ + S + W  +FLI A +     + +LIFG++E Q
Sbjct: 397 IKGITGLPGFIGGLIASTLAGNILSQD-SKNVWLIVFLIMAFVNILCVIFYLIFGSAERQ 455

Query: 303 PWNDSEYD 310
            W   E D
Sbjct: 456 DWAKEEKD 463

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score = 91.2 bits (227), Expect = 1e-20
 Identities = 65/301 (21%), Positives = 109/301 (36%), Gaps = 16/301 (5%)

Query: 2   SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWC 61
           + W P  ERA   S   S    G ++  P+ G +    + W   F + G + I+W   W 
Sbjct: 108 ASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH-FSWQWAFIIEGVLGIIWGVLW- 165

Query: 62  YIGANSPAQHPFISLEERIYI------ETSLVHSSTVSSSMKVPWKAILTSLPVWAVLIT 115
                 P Q      EE  YI              +     ++  K +L    VW + + 
Sbjct: 166 LKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQI--KELLKDRRVWGLALG 223

Query: 116 HLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQI 175
               N G    LT  P+Y+       I   GF+++ P +  +I +++   L+D +  ++ 
Sbjct: 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRG 282

Query: 176 LSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDL 235
            S   +RK     GL  S                A+  L              +S++   
Sbjct: 283 KSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDN--A 340

Query: 236 SPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLI 295
             N AG   G  N   N+  I+GP+ +G I     S   +    ++ AA+   G L +L+
Sbjct: 341 PGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGS---FAGALMVVAALALIGALSYLL 397

Query: 296 F 296
            
Sbjct: 398 L 398

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 59/296 (19%), Positives = 101/296 (34%), Gaps = 56/296 (18%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           +++W PP ER R      +G   G L+   + GLLA S  GW  +F +   + ++ A   
Sbjct: 112 IAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES-LGWRWLFLILAILGLLLALLL 170

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQN 120
                                                     +     +  + +     +
Sbjct: 171 ------------------------------------------LFLLRLLLLLALAFFLLS 188

Query: 121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTV 180
           +GY+ LLT +P Y+  VL       G L +   L   +  L+   L+D +          
Sbjct: 189 FGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL---------G 239

Query: 181 SRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFA 240
            R++   IGL  +A  L+ L+      +  +  L L   +                P   
Sbjct: 240 RRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEAR 299

Query: 241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296
           GT  G  N   ++   LGPL  G ++        +  +FLI AA+     L+ L+ 
Sbjct: 300 GTASGLFNTFGSLGGALGPLLAGLLLDTGG----YGGVFLILAALALLAALLLLLL 351

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 65.9 bits (161), Expect = 4e-12
 Identities = 56/259 (21%), Positives = 93/259 (35%), Gaps = 22/259 (8%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           ++ W PP ER R      +G   G  +   + GLLA   +GW + F +   +A++ A   
Sbjct: 110 IADWFPPEERGRALGLLSAGFGLGAALGPLLGGLLASL-FGWRAAFLILAILALLAAVLA 168

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQN 120
             +    P +       E                +  VP   +L   PV  +L+  L   
Sbjct: 169 ALLLPRPPPESKRPKPAEEA-------------PAPLVPAWKLLLRDPVLWLLLALLLFG 215

Query: 121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTV 180
           + ++ LLT +P Y   VL       G L     L   I  L+   L+D +  ++ L   +
Sbjct: 216 FAFFALLTYLPLYQE-VLGLSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLAL 274

Query: 181 SRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFA 240
                  + L     AL+ L+     L+ A+  L     +        +S+         
Sbjct: 275 L-----LLILAALGLALLSLTESSLWLLVALLLLGFGAGLVFPALNALVSDL--APKEER 327

Query: 241 GTLMGFTNGCANIASILGP 259
           GT  G  N   ++   LGP
Sbjct: 328 GTASGLYNTAGSLGGALGP 346

Length = 346

>gnl|CDD|233167 TIGR00881, 2A0104, phosphoglycerate transporter family protein

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 50/274 (18%), Positives = 94/274 (34%), Gaps = 19/274 (6%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           ++KW    ER    SF       G  +  P+        + W  +F V G +AI+ +   
Sbjct: 108 VTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLIC 167

Query: 61  CYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKA----ILTSLPVWAVLITH 116
             +  +SP        EE +  E     +      +    +     +L +  +W + + +
Sbjct: 168 FLLLRDSPQSCGLPPAEE-MPNEEPDGDAEKKEEELT-KKQIFLQYVLLNKVLWYISLGY 225

Query: 117 LCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL 176
           +        +L   P Y+     F  +   +      L   +  L+  WL+D +   +  
Sbjct: 226 VFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG 285

Query: 177 SPTVSRK---MWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHL 233
              V      + + +  W + AA        + L+  I    L   +  G          
Sbjct: 286 PLAVFFMALIIVSLLVYWLNPAA--------NPLMDLICLFALGFLVY-GPQMLIGVIAS 336

Query: 234 DLSPNFA-GTLMGFTNGCANIASILGPLFVGFIV 266
           +L+P  A GT  GF    A +  IL  L +G++ 
Sbjct: 337 ELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLA 370

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 379

>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]

 Score = 44.1 bits (105), Expect = 5e-05
 Identities = 53/297 (17%), Positives = 103/297 (34%), Gaps = 38/297 (12%)

Query: 5   APPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVA-IVWAAAWCYI 63
            PP +R R  +  F+G     ++ +P+   L    +GW + F     +A +     W  +
Sbjct: 130 VPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL-FGWRATFLAIAVLALLALLLLWKLL 188

Query: 64  GANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGY 123
             +  +      L   +                      +L    V   L+       G+
Sbjct: 189 PPSEISGSLPGPLRTLL---------------------RLLRRPGVLLGLLATFLFMTGH 227

Query: 124 WTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRK 183
           + L T +  ++ SV  F + +   +  A  +A +I  L+   LAD    + +++  +   
Sbjct: 228 FALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADRGPRRALIAALL--- 284

Query: 184 MWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTL 243
                     A AL+ L+F G +   A+  L L     +    G  +    L+P+ A   
Sbjct: 285 --------LLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLA 336

Query: 244 MGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE 300
                   N+   LG   +G +V D      +     + AA+     L+ L+    +
Sbjct: 337 GSLNVAAFNLGIALGA-ALGGLVLDALG---YAATGWVGAALLLLALLLALLSARKD 389

Length = 394

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 43.6 bits (103), Expect = 8e-05
 Identities = 35/187 (18%), Positives = 61/187 (32%), Gaps = 18/187 (9%)

Query: 112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIV 171
           + +       G   L   +P Y+   L       G L  A  L   +   +   L+D   
Sbjct: 1   LFLAAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFG 60

Query: 172 AKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDN--LVGAITCLTLAIAINAGTYTGFL 229
            +++L           IGL   A  L+ L F      L+       L            +
Sbjct: 61  RRRVLL----------IGLLLFALGLLLLLFASSLWLLLVLRVLQGLGGGALFPAAAALI 110

Query: 230 SNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFG 289
           ++     P   G  +G  +    + + LGPL  G +     S+  W+  FLI A +    
Sbjct: 111 ADW--FPPEERGRALGLLSAGFGLGAALGPLLGGLLA----SLFGWRAAFLILAILALLA 164

Query: 290 NLIFLIF 296
            ++  + 
Sbjct: 165 AVLAALL 171

Length = 346

>gnl|CDD|225180 COG2271, UhpC, Sugar phosphate permease [Carbohydrate transport and metabolism]

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 58/309 (18%), Positives = 110/309 (35%), Gaps = 30/309 (9%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGL-LAGSPWGWPSIFYVSGAVAIVWAAA 59
           ++ W    ER   +S   +    G  +   VA L       GW + FY  G +AI+ A  
Sbjct: 142 ITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALI 201

Query: 60  WCYIGANSPAQHPFISLEE------RIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVL 113
             ++  + P       +EE       IY E      +   ++ ++  K +L +  +W + 
Sbjct: 202 LLFLLRDRPQSEGLPPIEEYRGDPLEIYEEE---KENEGLTAWQIFVKYVLKNKLIWLLA 258

Query: 114 ITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI---LVFSWLADYI 170
           + ++      + +    P Y++ V  F +    +   A  L +   +   L+  WL+D +
Sbjct: 259 LANVFVYVVRYGINDWGPLYLSEVKGFSLVKANW---AISLFEVAGLPGTLLAGWLSDKL 315

Query: 171 VAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD-NLVGAITCLTLAIAINAGTYTGFL 229
              +       R     I +    A+LV      + + +     L +   +  G      
Sbjct: 316 FKGR-------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIG 368

Query: 230 SNHLDLSPNFA-GTLMGFTNGCANIA-SILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFF 287
               +  P  A GT  GF    A +  + L  L +G+I  D      W   F++ +    
Sbjct: 369 LAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIA-DTWG---WDGGFIVLSIAAL 424

Query: 288 FGNLIFLIF 296
              L+ L  
Sbjct: 425 LAILLLLPV 433

Length = 448

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	318
KOG2532|consensus	466		100.0
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	100.0
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	100.0
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.97
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.96
PRK11663	434	regulatory protein UhpC; Provisional	99.96
PRK03545	390	putative arabinose transporter; Provisional	99.96
TIGR00893	399	2A0114 d-galactonate transporter.	99.96
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.95
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.95
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.95
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.95
PLN00028	476	nitrate transmembrane transporter; Provisional	99.95
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.95
PRK10642	490	proline/glycine betaine transporter; Provisional	99.95
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.95
PRK11010	491	ampG muropeptide transporter; Validated	99.94
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.94
PRK09705	393	cynX putative cyanate transporter; Provisional	99.94
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.94
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.94
PRK10489	417	enterobactin exporter EntS; Provisional	99.94
PRK09952	438	shikimate transporter; Provisional	99.94
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.94
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.93
PRK03699	394	putative transporter; Provisional	99.93
PRK10091	382	MFS transport protein AraJ; Provisional	99.93
PRK15011	393	sugar efflux transporter B; Provisional	99.93
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.93
KOG2533|consensus	495		99.93
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.93
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.93
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.93
PRK12307	426	putative sialic acid transporter; Provisional	99.93
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.92
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.92
PRK10504	471	putative transporter; Provisional	99.92
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.92
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.92
PRK11902	402	ampG muropeptide transporter; Reviewed	99.92
PRK09874	408	drug efflux system protein MdtG; Provisional	99.92
TIGR00900	365	2A0121 H+ Antiporter protein.	99.92
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.92
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.92
PRK05122	399	major facilitator superfamily transporter; Provisi	99.91
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.91
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.91
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.91
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.91
PRK15075	434	citrate-proton symporter; Provisional	99.91
PRK11043	401	putative transporter; Provisional	99.9
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.9
PRK09528	420	lacY galactoside permease; Reviewed	99.9
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.9
TIGR00898	505	2A0119 cation transport protein.	99.9
TIGR00891	405	2A0112 putative sialic acid transporter.	99.9
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.9
PRK12382	392	putative transporter; Provisional	99.9
PRK03893	496	putative sialic acid transporter; Provisional	99.9
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.9
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.89
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.89
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.88
KOG2504|consensus	509		99.88
PRK10054	395	putative transporter; Provisional	99.88
TIGR00901	356	2A0125 AmpG-related permease.	99.88
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.88
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.88
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.88
TIGR00895	398	2A0115 benzoate transport.	99.88
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.88
PRK03633	381	putative MFS family transporter protein; Provision	99.88
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.88
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.88
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.87
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.87
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.87
PRK10133	438	L-fucose transporter; Provisional	99.87
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.86
KOG0569|consensus	485		99.86
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.86
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.85
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.83
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.83
KOG0253|consensus	528		99.82
KOG1330|consensus	493		99.81
KOG3764|consensus	464		99.81
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.78
TIGR00805	633	oat sodium-independent organic anion transporter.	99.77
KOG4686|consensus	459		99.76
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.76
PF13347	428	MFS_2: MFS/sugar transport protein	99.75
KOG2563|consensus	480		99.74
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.72
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.71
PRK09669	444	putative symporter YagG; Provisional	99.71
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.71
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.7
PRK10429	473	melibiose:sodium symporter; Provisional	99.7
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.7
PRK09848	448	glucuronide transporter; Provisional	99.69
PRK10054	395	putative transporter; Provisional	99.69
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.69
COG2211	467	MelB Na+/melibiose symporter and related transport	99.69
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.68
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.68
KOG2615|consensus	451		99.67
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.67
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.67
PRK11663	434	regulatory protein UhpC; Provisional	99.67
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.66
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.66
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.65
KOG0254|consensus	513		99.65
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.64
PRK11462	460	putative transporter; Provisional	99.64
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.62
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.62
PRK03699	394	putative transporter; Provisional	99.61
PRK10504	471	putative transporter; Provisional	99.61
PRK10489	417	enterobactin exporter EntS; Provisional	99.61
PLN00028	476	nitrate transmembrane transporter; Provisional	99.61
KOG0252|consensus	538		99.61
PRK09528	420	lacY galactoside permease; Reviewed	99.61
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.61
TIGR00900	365	2A0121 H+ Antiporter protein.	99.6
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.6
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.59
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.59
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.58
KOG0255|consensus	521		99.58
PRK03545	390	putative arabinose transporter; Provisional	99.58
PRK10091	382	MFS transport protein AraJ; Provisional	99.58
TIGR00891	405	2A0112 putative sialic acid transporter.	99.58
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.58
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.58
TIGR00893	399	2A0114 d-galactonate transporter.	99.57
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.57
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.57
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.57
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.56
PRK09874	408	drug efflux system protein MdtG; Provisional	99.56
PRK11043	401	putative transporter; Provisional	99.56
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.56
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.56
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.55
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.55
PRK03633	381	putative MFS family transporter protein; Provision	99.55
PRK05122	399	major facilitator superfamily transporter; Provisi	99.55
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.55
PRK12382	392	putative transporter; Provisional	99.54
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.54
PRK12307	426	putative sialic acid transporter; Provisional	99.54
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.53
PRK09705	393	cynX putative cyanate transporter; Provisional	99.53
PRK03893	496	putative sialic acid transporter; Provisional	99.53
KOG3626|consensus	735		99.52
PRK15011	393	sugar efflux transporter B; Provisional	99.52
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.51
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.51
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.5
TIGR00895	398	2A0115 benzoate transport.	99.5
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.5
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.5
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.49
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.49
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.48
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.47
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.46
PTZ00207	591	hypothetical protein; Provisional	99.46
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.46
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.43
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.43
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.41
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.41
KOG1330|consensus	493		99.41
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.39
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.37
KOG3764|consensus	464		99.36
KOG2816|consensus	463		99.36
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.36
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.36
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.36
PRK10133	438	L-fucose transporter; Provisional	99.36
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.36
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.34
PRK11010	491	ampG muropeptide transporter; Validated	99.33
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.32
PTZ00207	591	hypothetical protein; Provisional	99.32
PRK11902	402	ampG muropeptide transporter; Reviewed	99.32
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.3
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.3
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.3
TIGR00805	633	oat sodium-independent organic anion transporter.	99.28
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.28
PRK09952	438	shikimate transporter; Provisional	99.27
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.26
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.26
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.25
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.24
TIGR00901	356	2A0125 AmpG-related permease.	99.24
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.24
PRK10642	490	proline/glycine betaine transporter; Provisional	99.22
PRK15075	434	citrate-proton symporter; Provisional	99.21
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.21
TIGR00898	505	2A0119 cation transport protein.	99.19
KOG2615|consensus	451		99.17
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	99.14
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.14
KOG2532|consensus	466		99.12
PRK10429	473	melibiose:sodium symporter; Provisional	99.1
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.1
PF13347	428	MFS_2: MFS/sugar transport protein	99.09
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.08
PRK09669	444	putative symporter YagG; Provisional	99.08
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.07
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.07
KOG3762|consensus	618		98.99
KOG2504|consensus	509		98.96
PRK11462	460	putative transporter; Provisional	98.95
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.94
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.92
COG2211	467	MelB Na+/melibiose symporter and related transport	98.9
KOG0254|consensus	513		98.88
KOG0255|consensus	521		98.87
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	98.79
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	98.78
PRK09848	448	glucuronide transporter; Provisional	98.75
KOG2533|consensus	495		98.73
KOG2325|consensus	488		98.71
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.7
KOG0569|consensus	485		98.69
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.64
PF12832	77	MFS_1_like: MFS_1 like family	98.64
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	98.57
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	98.53
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	98.53
KOG2325|consensus	488		98.49
KOG3810|consensus	433		98.49
KOG0252|consensus	538		98.46
KOG2816|consensus	463		98.45
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	98.38
KOG0253|consensus	528		98.34
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	98.31
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.3
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	98.22
KOG2563|consensus	480		98.19
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	98.18
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.17
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	98.16
KOG3098|consensus	461		97.96
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	97.78
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	97.75
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	97.73
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	97.65
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	97.64
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	97.61
PRK03612	521	spermidine synthase; Provisional	97.43
COG0477	338	ProP Permeases of the major facilitator superfamil	97.43
KOG3574|consensus	510		97.42
COG2270	438	Permeases of the major facilitator superfamily [Ge	97.4
KOG3626|consensus	735		97.35
COG3202	509	ATP/ADP translocase [Energy production and convers	97.32
KOG4332|consensus	454		97.18
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	97.16
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	97.15
KOG0637|consensus	498		97.11
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	97.1
KOG0637|consensus	498		97.05
KOG3762|consensus	618		97.0
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	96.99
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	96.61
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	96.38
KOG3574|consensus	510		96.32
KOG1237|consensus	571		96.1
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	95.8
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	95.76
KOG1479|consensus	406		95.63
KOG4686|consensus	459		95.26
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	95.23
KOG3880|consensus	409		94.41
KOG3098|consensus	461		94.24
KOG1479|consensus	406		93.96
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	93.95
KOG4332|consensus	454		93.91
COG3202	509	ATP/ADP translocase [Energy production and convers	93.8
KOG1237|consensus	571		92.81
KOG2601|consensus	503		92.29
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	91.83
PF01733	309	Nucleoside_tran: Nucleoside transporter; InterPro:	91.59
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	89.36
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	88.6
COG5336	116	Uncharacterized protein conserved in bacteria [Fun	88.07
KOG4830|consensus	412		87.78
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	87.22
PF02990	521	EMP70: Endomembrane protein 70; InterPro: IPR00424	85.31
PF11947	153	DUF3464: Protein of unknown function (DUF3464); In	83.91
COG2962	293	RarD Predicted permeases [General function predict	83.65
KOG2881|consensus	294		80.33

>KOG2532|consensus

Probab=100.00  E-value=3.5e-34  Score=244.12  Aligned_cols=306  Identities=44%  Similarity=0.803  Sum_probs=272.5

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      .++|.|++||++..++..++..+|.+++-++++++.+...||+++|++.++++++..++.+++..|+|++++..+++|.+
T Consensus       153 ~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~  232 (466)
T KOG2532|consen  153 LAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELK  232 (466)
T ss_pred             eeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHH
Confidence            36899999999999999999999999999999999987689999999999999999999999999999999999999998


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (318)
                      .+++...+++.+++ .+.|++++++++.+|.+++..++...+++.+..|+|.|+++++|++..+.|++.+++.+...+..
T Consensus       233 ~I~~~k~~~~~~~~-~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k  311 (466)
T KOG2532|consen  233 YIEKGKSEAHVKKK-PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVK  311 (466)
T ss_pred             HHHhcccccccCCC-CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHH
Confidence            88877666554322 67899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccc
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF  239 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (318)
                      +++|.++||..+| .+.....||.+..++....++.++.+.+.+.... ..+.++.+..+..+...........+..|++
T Consensus       312 ~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~  390 (466)
T KOG2532|consen  312 FVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQH  390 (466)
T ss_pred             HHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchH
Confidence            9999999999998 7777888999999999999999999998886444 5666666777777777777777777778999


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCC
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQPWNDSEY  309 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (318)
                      .+..+|+.+....+.++++|.+.|.+... ++...|+.+|++.+++.+++.+.+.++.+.+++++.+.++
T Consensus       391 a~~l~g~~~~~~~~~~~~~P~~vg~~~~~-~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~~~  459 (466)
T KOG2532|consen  391 AGFVMGIINFVGALAGFIAPLLVGIIVTD-NTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTKSEE  459 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHheeeEeCC-CCHHHHHHHHHHHHHHHHHhchheeEeecCcccCccCCcc
Confidence            99999999999999999999999999963 2457999999999999999998888887777777766433

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.9e-33  Score=227.48  Aligned_cols=287  Identities=19%  Similarity=0.254  Sum_probs=224.1

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHH--HHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhH
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVA--GLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEE   78 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~--~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (318)
                      ++.|+|++|||+..++++++-++|..+.|++.  +.+..+ .+||..|++.++++++.+++.++..+|+|++..-.+.+|
T Consensus       142 i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~-~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~  220 (448)
T COG2271         142 ITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH-GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEE  220 (448)
T ss_pred             HHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHH
Confidence            46799999999999999999999999999999  888887 899999999999999999999999999998654333222


Q ss_pred             hhhhhhccCccccc---cccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHH
Q psy4758          79 RIYIETSLVHSSTV---SSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLA  155 (318)
Q Consensus        79 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~  155 (318)
                      -+....+..+++++   -...+.-.+-+++||.+|.+++.+.+.+..-+++..|.|.|+.|..|+|..+++...+.+-.+
T Consensus       221 ~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~a  300 (448)
T COG2271         221 YRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVA  300 (448)
T ss_pred             hhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence            21111111011110   011223345578899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--HHHHHHHHHHHHhhhcccccccccc
Q psy4758         156 QWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--GAITCLTLAIAINAGTYTGFLSNHL  233 (318)
Q Consensus       156 ~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  233 (318)
                      +++|++++||++||+-+.+       |....++.++...+++..+...++...  ..++++.+|+...+.. ........
T Consensus       301 gl~G~Ll~GwlSDklfkgr-------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq-mLiGl~a~  372 (448)
T COG2271         301 GLPGTLLAGWLSDKLFKGR-------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ-MLIGLAAA  372 (448)
T ss_pred             hhHHHHHHHHHHHHhcccc-------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH-HHHHHHHh
Confidence            9999999999999986333       222346666667777777777766533  4444555555555544 44445566


Q ss_pred             ccCccc-hhhHHHHHHHHHHH-HHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         234 DLSPNF-AGTLMGFTNGCANI-ASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       234 ~~~~~~-~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      |..|.+ .|++.|+...+.++ |.+.+....|++.|.    .+|...|++..+..+++.++.....+.+
T Consensus       373 e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~----~gW~g~Fi~~~~~a~l~~lll~~~~~~~  437 (448)
T COG2271         373 EFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT----WGWDGGFIVLSIAALLAILLLLPVWNAE  437 (448)
T ss_pred             ccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec----CCCcchHHHHHHHHHHHHHHHHHHHhhc
Confidence            888888 99999999999999 888999999999998    7899999998888888877776655443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=100.00  E-value=4.1e-31  Score=230.71  Aligned_cols=303  Identities=38%  Similarity=0.696  Sum_probs=222.7

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPW-GWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER   79 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (318)
                      ++||+|+++|++++++...+..+|.++++++++.+.+. . |||+.|++.++++++..++.+.+.+|+|+++++.+++|+
T Consensus       156 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~-~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  234 (465)
T TIGR00894       156 IVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES-WGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK  234 (465)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH
Confidence            36899999999999999999999999999999999876 5 999999999999888877777777888866555444444


Q ss_pred             hhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758          80 IYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL  159 (318)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~  159 (318)
                      +..++..+++++ +.+.+.++++++++|.+|...+..++.....+.+.+|+|.|+++.+|++..+.++..+...++..++
T Consensus       235 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~  313 (465)
T TIGR00894       235 KYINSSLQGQKG-STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLC  313 (465)
T ss_pred             HHHHhhcccccC-CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHH
Confidence            443332221111 1223456899999999999999999999999999999999999989999999999999999999999


Q ss_pred             HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc
Q psy4758         160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF  239 (318)
Q Consensus       160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (318)
                      .+++|+++||+++|+.......++.....+..+..+.........+.....+..+.++.+......+.......+..|+.
T Consensus       314 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  393 (465)
T TIGR00894       314 SIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRF  393 (465)
T ss_pred             HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhH
Confidence            99999999999887655432223333333332222222222222222222333333333333333444445556777888


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQPWND  306 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (318)
                      +|.+.|+.+..+++++.++|.+.|.+.|.... .+|..+|.+.++..+++.++.....+.+++++++
T Consensus       394 ~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~-~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~~  459 (465)
T TIGR00894       394 LGFIKGITGLPGFIGGLIASTLAGNILSQDSK-NVWLIVFLIMAFVNILCVIFYLIFGSAERQDWAK  459 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCc-hHHHHHHHHHHHHHHHHHHHeeeeecceecCCCC
Confidence            99999999999999999999999999886322 4588999999888888887776666555555543

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.97  E-value=3.9e-29  Score=204.97  Aligned_cols=264  Identities=20%  Similarity=0.259  Sum_probs=213.7

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      +|..|+++|++++++..++.+++.++|.+++.++.+. +|||++|+..+.++++..+..+..+|  |++.++..      
T Consensus       127 ~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~-~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~------  197 (394)
T COG2814         127 ARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL-FGWRATFLAIAVLALLALLLLWKLLP--PSEISGSL------  197 (394)
T ss_pred             HHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCC------
Confidence            4678999999999999999999999999999999999 99999999999999999888999998  22111111      


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  +.+..+..+++|+|.++...+..++...+.+..++|+.+++++..|+|....++....++++.++|+.
T Consensus       198 ------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~  265 (394)
T COG2814         198 ------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNL  265 (394)
T ss_pred             ------------CcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHH
Confidence                        11112245789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchh
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG  241 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (318)
                      ++|++.|| +.++.+          .....+..+.++.+.+..++.........+..+..............+..|+.+.
T Consensus       266 ~gGrl~dr-~~~~~l----------~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~  334 (394)
T COG2814         266 LGGRLADR-GPRRAL----------IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAAD  334 (394)
T ss_pred             HHhhhccc-cchhHH----------HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchH
Confidence            99999999 777755          5555666666666666665554333333333333333444445555556678899


Q ss_pred             hHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758         242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV  301 (318)
Q Consensus       242 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (318)
                      .+.+++....|+|..+|..++|.++|+    .+|....++.+++.+++.++.....+.++
T Consensus       335 ~a~sl~~aa~nlgia~GA~lGG~v~~~----~g~~~~~~~~a~l~~~a~~~~~~~~~~~~  390 (394)
T COG2814         335 LAGSLNVAAFNLGIALGAALGGLVLDA----LGYAATGWVGAALLLLALLLALLSARKDR  390 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh----hchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            999999999999999999999999999    78999999999988888877776655443

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.96  E-value=9.7e-29  Score=215.54  Aligned_cols=284  Identities=13%  Similarity=0.153  Sum_probs=195.3

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC--CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhH
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS--PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEE   78 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (318)
                      ++||+|+++||+++|+.+.+.++|.++++.+..++.+.  ..+||..|.+.++++++.+++.+++.+|+|++.+..++++
T Consensus       147 i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~  226 (467)
T PRK09556        147 ITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE  226 (467)
T ss_pred             HHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh
Confidence            36899999999999999999999999999998777653  1269999999898888877777777788776543322222


Q ss_pred             hhhhhhccCccccccccCCcc-----hhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHH
Q psy4758          79 RIYIETSLVHSSTVSSSMKVP-----WKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPY  153 (318)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~  153 (318)
                      .  ..+...++++..+.++.+     .++.+|+|.+|...+..++.....++...|+|.|+++.+|+++.+++.......
T Consensus       227 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~  304 (467)
T PRK09556        227 I--FGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFE  304 (467)
T ss_pred             c--ccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHH
Confidence            1  000000000000011111     223789999999999999988888889999999999889999999999998899


Q ss_pred             HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHH--HHHHhcCchhHHHHHHHHHHHHHhhhcccccccc
Q psy4758         154 LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAAL--VGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSN  231 (318)
Q Consensus       154 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (318)
                      ++.+++.+++|+++||+++|+..          .....+..+..  ..+...++.....+..+.++.+..+.... ....
T Consensus       305 ~~~~ig~~~~G~lsDr~g~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~  373 (467)
T PRK09556        305 IGALVGSLLWGWLSDLANGRRAL----------VACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLL-IGVA  373 (467)
T ss_pred             HHHHHHHHHHHHHHHHHCCCchH----------HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHH-HHHH
Confidence            99999999999999999998754          22222222221  22222222221223333333332222211 1233


Q ss_pred             ccccCccc-hhhHHHHHHHHHHH-HHhHhhhhhheeeccCC--------CccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         232 HLDLSPNF-AGTLMGFTNGCANI-ASILGPLFVGFIVTDNT--------SVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       232 ~~~~~~~~-~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      ..|..|++ +|++.|+.+...++ |++++|.+.|++.|.+.        ...+|+..|.+..++.+++.+..+.+.
T Consensus       374 ~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  449 (467)
T PRK09556        374 AVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA  449 (467)
T ss_pred             HHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence            34666766 99999999999997 67999999999999110        025799999998888888877766554

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.96  E-value=3.9e-28  Score=209.83  Aligned_cols=282  Identities=17%  Similarity=0.203  Sum_probs=188.4

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      +|++|+++|++++++.+.+.++|.++++.+++.+.+. .|||+.|++.++++++..++..+.+||+|++.+....++.+.
T Consensus       137 ~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~-~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  215 (434)
T PRK11663        137 TAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH-YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH  215 (434)
T ss_pred             HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc
Confidence            5889999999999999999999999999999999988 899999999988877766666667788765321111000000


Q ss_pred             hhhccCccccccccCCcchh-----hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWK-----AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQ  156 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~  156 (318)
                      ..++..+++   +..+.+++     ..+++|.+|...+..++.......+..|+|.|+++.+|++..+++...+...+++
T Consensus       216 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~  292 (434)
T PRK11663        216 DALELAQQQ---EGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGG  292 (434)
T ss_pred             cccccchhc---cccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence            000000000   00111222     2567888998888887777788888899999998778999999999999999999


Q ss_pred             HHHHHHHHHhHHHHhh--hcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccc
Q psy4758         157 WILILVFSWLADYIVA--KQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLD  234 (318)
Q Consensus       157 ~~~~~~~g~l~dr~g~--~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (318)
                      .++.++.|+++||+.+  |+...      .....+.....+...... ..+........+.++.+... ..........+
T Consensus       293 ~~g~~~~g~l~dr~~~~~r~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~  364 (434)
T PRK11663        293 FIGALVAGWGSDKLFNGNRGPMN------LIFAAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFG-PQMLIGMAAAE  364 (434)
T ss_pred             HHHHHHHhhhHHHhccCCccHHH------HHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhh-HHHHHHHHHHh
Confidence            9999999999999943  23210      001112121222222111 11111122222222222111 11122234456


Q ss_pred             cCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         235 LSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       235 ~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      ..|++ |++++|+.+...++|++++|.+.|++.|.    .+|...|+..+++.+++.+..+...++
T Consensus       365 ~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~----~g~~~~f~~~~~~~~~~~~~~~~~~~~  426 (434)
T PRK11663        365 CSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI----WHWTGFFVVISIAAGISALLLLPFLNA  426 (434)
T ss_pred             cccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh----cccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            66554 99999999999999999999999999998    679999999888888877666554433

>PRK03545 putative arabinose transporter; Provisional

Probab=99.96  E-value=2.1e-27  Score=202.84  Aligned_cols=258  Identities=16%  Similarity=0.153  Sum_probs=193.7

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++|+...+.++|.+++|++++.+.+. .|||+.|++.++++++..+..+..+||.|++++         
T Consensus       123 ~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~---------  192 (390)
T PRK03545        123 IRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY-LGWRTTFLAIGGGALITLLLLIKLLPLLPSEHS---------  192 (390)
T ss_pred             HHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc---------
Confidence            5789999999999999999999999999999999887 899999999998888776666666666442211         


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                   ....+.++++|+|.++...+..++.....+....+.|.++++..|+++.+++.......++++++++
T Consensus       193 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~  259 (390)
T PRK03545        193 -------------GSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSV  259 (390)
T ss_pred             -------------chHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHH
Confidence                         0012345788999888776666666666677778888898887899999999999999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHHhhhccccccccccccCccch
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL-SFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFA  240 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (318)
                      +.|++.||+++|+.           ..+..+...+...+ ...++........++.+.+... ..+.......+..|+++
T Consensus       260 ~~g~l~dr~~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~  327 (390)
T PRK03545        260 LFSRLGNRHPSGFL-----------LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMC-IGLAMQVKVLKLAPDAT  327 (390)
T ss_pred             HHHHHhhccchhHH-----------HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhc-chHHHHHHHHHhCCCcH
Confidence            99999999987753           23333333333332 2223222233333444444322 23334455556778789


Q ss_pred             hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      ++++|+.+...++|..+||.+.|.+.|.    .+++..+...+.+.+++.+......+
T Consensus       328 ~~~~g~~~~~~~~g~~~G~~~~G~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~  381 (390)
T PRK03545        328 DVAMALFSGIFNIGIGAGALLGNQVSLH----LGLSSIGYVGAALALAALVWSILIFR  381 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhc----cChhHHHHHHHHHHHHHHHHHHHHcc
Confidence            9999999999999999999999999999    78899999998888888777766654

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.96  E-value=1e-26  Score=198.94  Aligned_cols=284  Identities=21%  Similarity=0.354  Sum_probs=201.1

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++.+....+|.++++.+++.+.+. .+||+.|++.+++.++..++..+..||+|++++..++++++.
T Consensus       108 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (399)
T TIGR00893       108 ASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH-FSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYI  186 (399)
T ss_pred             HHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-CCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhh
Confidence            5889999999999999999999999999999998887 899999999998888776777777777765443333332222


Q ss_pred             hhhccCc---cccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758          82 IETSLVH---SSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI  158 (318)
Q Consensus        82 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~  158 (318)
                      ..+....   +++.++..+...++.+++|+++...+..++..........+.|.|+++.+|.++.+.+.......+++++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (399)
T TIGR00893       187 VVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFI  266 (399)
T ss_pred             cchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHH
Confidence            1111111   1111123345677889999999999999999999999999999999988999999999999999999999


Q ss_pred             HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc
Q psy4758         159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN  238 (318)
Q Consensus       159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (318)
                      +.++.|++.||+++|+......  ......+..+..+....... .+..........++.+..+ ..+....+..|..|+
T Consensus       267 ~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  342 (399)
T TIGR00893       267 GMILGGRLSDLLLRRGKSLVFA--RKTAIIAGLVLSLLMFATNY-VNIPYAALALVALGFFGLG-AGAIGWALISDNAPG  342 (399)
T ss_pred             HHHHHHHHHHHHhhcccchhHH--HHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcCh
Confidence            9999999999999996221100  00001111111111111111 1122122223333333333 455566666677776


Q ss_pred             c-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccc-hHHHHHHHHHHHHHHHHHHH
Q psy4758         239 F-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQ-WQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       239 ~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  294 (318)
                      + |+++.|+.+...++|+.++|.+.|.+.|.    .+ |...+.+.+++.+++.+...
T Consensus       343 ~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~----~g~~~~~~~~~~~~~~~~~~~~~  396 (399)
T TIGR00893       343 NIAGLTGGLINSLGNLGGIVGPIVIGAIAAT----TGSFAGALMVVAALALIGALSYL  396 (399)
T ss_pred             hHHHHHHHHHHHHHHHhhhhhhHHhhhhccC----CCchhHHHHHHHHHHHHHHHHHH
Confidence            6 99999999999999999999999999998    45 88888888877777666554

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.95  E-value=3.3e-27  Score=191.64  Aligned_cols=267  Identities=15%  Similarity=0.191  Sum_probs=218.6

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCC---chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWG---WPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLE   77 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~g---Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (318)
                      +++|||||++|.++|+.. ..++|..+..+++..+... .+   ||..-.+..+..++..++.++...|.|+.++..++.
T Consensus       129 ~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~-~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~  206 (417)
T COG2223         129 ASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA-FGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQ  206 (417)
T ss_pred             ccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccccc
Confidence            478999999999999999 9999999999999999887 78   999999999888888888999988887642221111


Q ss_pred             HhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHH
Q psy4758          78 ERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQW  157 (318)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~  157 (318)
                                        .+..++.++++|+.|.+++.++..+.++.++..++|.|+++++|.++.++|.......+.+.
T Consensus       207 ------------------~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~  268 (417)
T COG2223         207 ------------------LPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGA  268 (417)
T ss_pred             ------------------chhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH
Confidence                              11446788999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC------chhHHHHHHHHHHHHHhhhcccccccc
Q psy4758         158 ILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG------DNLVGAITCLTLAIAINAGTYTGFLSN  231 (318)
Q Consensus       158 ~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (318)
                      +.++.+|+++||+|.+|..          ...+..++++........      .........++....+.+.........
T Consensus       269 l~Rp~GG~LsDR~Gg~rv~----------~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~  338 (417)
T COG2223         269 LARPLGGWLSDRIGGRRVT----------LAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKM  338 (417)
T ss_pred             HHHhccchhhhhccchhHH----------HHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheee
Confidence            9999999999999999976          555666666655555543      122233333333444455566677777


Q ss_pred             ccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         232 HLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       232 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      +...+|++.|.+.|+....+++|++.-|...+...+.+   .++...|++...+.+++.+..+....++
T Consensus       339 Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~t---g~~~~~f~~~~~~~~~a~v~~~~~y~r~  404 (417)
T COG2223         339 IPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLT---GSYTGAFMLLLAFYLVALVLTWALYARR  404 (417)
T ss_pred             chHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            77888999999999999999999999999999999996   4689999999999998888877766554

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.95  E-value=4e-27  Score=204.54  Aligned_cols=289  Identities=16%  Similarity=0.170  Sum_probs=187.9

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHH-hHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNL-VTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      .|++|+++|++++|+++.+.++|.. .+|+++..+... .+||+.|++.++++++..++..+++||+|++....++++.+
T Consensus       146 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  224 (452)
T PRK11273        146 VHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK  224 (452)
T ss_pred             HHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh
Confidence            4789999999999999999999875 455544444444 69999999999888887777778888877643221111110


Q ss_pred             h-hhhccCccccccccCCcc-hhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758          81 Y-IETSLVHSSTVSSSMKVP-WKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI  158 (318)
Q Consensus        81 ~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~  158 (318)
                      . ..+..++++.+..+.+.. .+.++|+|.+|...+..++.....+....|+|.|++++.|++..+++.......++.++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~  304 (452)
T PRK11273        225 NDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIP  304 (452)
T ss_pred             hccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            0 000000000000000111 12367889999988888888888888899999999998899989999888888899999


Q ss_pred             HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-chhH-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758         159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG-DNLV-GAITCLTLAIAINAGTYTGFLSNHLDLS  236 (318)
Q Consensus       159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (318)
                      +.++.|+++||+++++...       .......+..++...+.... ++.. .....+.++...... .........+..
T Consensus       305 g~~~~G~l~dr~~~~r~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~  376 (452)
T PRK11273        305 GTLLCGWMSDKVFRGNRGA-------TGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGP-VMLIGLHALELA  376 (452)
T ss_pred             HHHHHHHHHHHHccCCcch-------HHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhH-HHHHHHHHHHHc
Confidence            9999999999995432110       01122222223332222222 1221 222223333322221 112223344566


Q ss_pred             ccc-hhhHHHHHHHHHHHHHhH-hhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccCC
Q psy4758         237 PNF-AGTLMGFTNGCANIASIL-GPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQP  303 (318)
Q Consensus       237 ~~~-~~~~~g~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (318)
                      |++ ||+++|+.+...++|+.+ +|.+.|.+.|.    .+|+..|.+.+++++++++....+.+.++++
T Consensus       377 p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~----~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  441 (452)
T PRK11273        377 PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF----FGWDGGFMVMIGGSILAVILLIVVMIGEKRH  441 (452)
T ss_pred             ChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH----hcchHHHHHHHHHHHHHHHHHHHHhccccch
Confidence            655 999999999999998765 79999999998    6789999988888888877777665554443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.95  E-value=5e-27  Score=201.35  Aligned_cols=271  Identities=14%  Similarity=0.211  Sum_probs=184.2

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC-----CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS-----PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISL   76 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-----~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (318)
                      +||+|+++|++++++++.+.++|.++++++++++.+.     ..|||+.|++.++++++..++.++++||+|++.+..++
T Consensus       122 ~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~  201 (412)
T TIGR02332       122 TFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDE  201 (412)
T ss_pred             HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCH
Confidence            6899999999999999999999999999999988641     26999999999998888777778888998876544333


Q ss_pred             hHhhhhhhccCcc------cccc-ccC----CcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-hcceeec
Q psy4758          77 EERIYIETSLVHS------STVS-SSM----KVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV-LQFDIKS  144 (318)
Q Consensus        77 ~~~~~~~~~~~~~------~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-~g~~~~~  144 (318)
                      ++++...+..+.+      ++.. ++.    +..+++++ +|.+|...+..++.....+.+.+|+|.++++. .|+++.+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~  280 (412)
T TIGR02332       202 EDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIM  280 (412)
T ss_pred             HHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH
Confidence            3322211111000      0000 011    12244444 57888888888888888999999999999872 4678888


Q ss_pred             hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhc
Q psy4758         145 NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGT  224 (318)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (318)
                      ++.+.....++.+++.+++|+++||+++|+...         .....+..+++.+....++.............+... .
T Consensus       281 ~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~  350 (412)
T TIGR02332       281 IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHT---------ALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFS-A  350 (412)
T ss_pred             hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHH---------HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh-h
Confidence            899999999999999999999999999776321         222233333332222222222111111111222111 1


Q ss_pred             cccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHH
Q psy4758         225 YTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIF  286 (318)
Q Consensus       225 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  286 (318)
                      .+.......+..|++ |++++|+.+...++|++++|.+.|.+.|..   .+|+..+.+.+++.
T Consensus       351 ~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~---g~~~~~~~~~~~~~  410 (412)
T TIGR02332       351 MAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDAT---GSFNSGLWFVAALL  410 (412)
T ss_pred             hhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccC---CCCchhHHHHHHHH
Confidence            222333434555554 999999999999999999999999999984   35888887666543

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.95  E-value=1.8e-26  Score=194.13  Aligned_cols=258  Identities=14%  Similarity=0.025  Sum_probs=183.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      +||+|+|+|++++++.+.+..+|.+++++++.++.+. .|||+.|++.++++++..++.++.+||+|+++++..+.    
T Consensus       104 ~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~----  178 (368)
T TIGR00903       104 ASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA-GGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGF----  178 (368)
T ss_pred             HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcch----
Confidence            5789999999999999999999999999999999987 99999999999998888788888899987543211000    


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  ++...++++++|||.+|...+..++....++++.+|+|.|+++ .|++.. .+.......+.+.++  
T Consensus       179 ------------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g--  242 (368)
T TIGR00903       179 ------------KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG--  242 (368)
T ss_pred             ------------HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH--
Confidence                        0001247789999999999999999999999999999999987 678754 555555545544444  


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-h
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-A  240 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  240 (318)
                       .++++||..||+.      |+........+.++....+....+.. ....+..+..++.....+....+..|.+|++ |
T Consensus       243 -~~~~~d~~~r~~~------r~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~r  314 (368)
T TIGR00903       243 -VAVIPDRVARAGL------RSIYIRAAALLIAAFFLALAFELNRL-ALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELH  314 (368)
T ss_pred             -HHHhhHHhhhhhh------HHHHHHHHHHHHHHHHHHHHHccccH-HHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhc
Confidence             5788888866531      11111222333333333444333322 2222333333333334445666777888887 9


Q ss_pred             hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      +++.|+.+..+++++..+|.+.+.+..      +....|.+.++..+++.+...
T Consensus       315 gt~~G~~~~~g~~~~~~~~~~~~~~~~------~~~~~f~~~~~~~~i~~~~~~  362 (368)
T TIGR00903       315 GKAAGAIGFTSRAISVALALAAMLFIS------SAEAYFTFLAILITIAFAIAL  362 (368)
T ss_pred             CcccchhhHHHHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999987763      346677777777777766654

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.95  E-value=5.8e-26  Score=198.09  Aligned_cols=278  Identities=14%  Similarity=0.067  Sum_probs=184.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHh----CC----CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA----GS----PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF   73 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~----~~----~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (318)
                      +||+|+++|++++|+.+...++|..+++.+.+.+.    +.    ..|||+.|++.++++++..++.+++.++.|+++  
T Consensus       149 ~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~--  226 (476)
T PLN00028        149 STMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN--  226 (476)
T ss_pred             HHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc--
Confidence            58899999999999998777777777766555442    11    148999999999988877666665554544321  


Q ss_pred             CChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHH
Q psy4758          74 ISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPY  153 (318)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~  153 (318)
                      .++.+++      .+.++  ......+++.++++++|.+.+..++.....+.+..++|.|+.+.+|+++.+++.+.+...
T Consensus       227 ~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~  298 (476)
T PLN00028        227 YRELKKS------GTMPK--DSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFG  298 (476)
T ss_pred             hhhHHhc------Ccccc--ccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            1110000      00000  111134566788899988888777777777778889999998878999999999999999


Q ss_pred             HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccccc
Q psy4758         154 LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHL  233 (318)
Q Consensus       154 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (318)
                      ++++++++++|+++||+++|+....   |+........+.++....+...++.......+++.+.+... ..+.......
T Consensus       299 ~~~~ig~~~~G~lsDr~~~r~~~~~---r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~  374 (476)
T PLN00028        299 LMNLFARPAGGYLSDVAARRFGMRG---RLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQA-ACGATFGIVP  374 (476)
T ss_pred             HHHHHHHhhhHHHHHHHHHhcCcch---hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-hhhhhcccCc
Confidence            9999999999999999998753311   23333344444444444444333322222222233332222 2333444555


Q ss_pred             ccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         234 DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       234 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      ++.|+++|++.|+.+...++|+.++|.+.+    . .+..+|...|++.+++.+++.++.++.+.
T Consensus       375 ~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~----~-~~~~~y~~~f~~~~~~~~i~~~~~~~~~~  434 (476)
T PLN00028        375 FVSRRSLGVISGLTGAGGNVGAVLTQLLFF----T-GSSYSTETGISLMGVMIIACTLPVAFIHF  434 (476)
T ss_pred             ccChhhchhhhhhhhccccHHHHHHHHHHH----h-cCCccHhhHHHHHHHHHHHHHHHHHheec
Confidence            777878999999998888888888877754    1 11257899999999888888877776653

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.95  E-value=6.9e-26  Score=194.67  Aligned_cols=264  Identities=17%  Similarity=0.194  Sum_probs=184.1

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++.+.+..+|..+++.++..+.+. .+||+.|++.++..++..++...++||+|+..+..++++   
T Consensus       129 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---  204 (406)
T PRK11551        129 SEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD-AAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK---  204 (406)
T ss_pred             HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-cCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch---
Confidence            5889999999999999999999999999999888887 899999999887777666666667788664321110000   


Q ss_pred             hhhccCccccccccCCcchhhhhc---chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILT---SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI  158 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~  158 (318)
                                   .++...+..++   ++..+...+..++.....+....|.|.++++ .|+++.+.+.......++.++
T Consensus       205 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~  270 (406)
T PRK11551        205 -------------QRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGAL  270 (406)
T ss_pred             -------------hhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHH
Confidence                         00011112222   2333444445555556667778899999988 799999999999999999999


Q ss_pred             HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc
Q psy4758         159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN  238 (318)
Q Consensus       159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (318)
                      +.++.|++.||+++|+.+          ..+.+...+++..+...++........+..+.+... ..+.......+..|+
T Consensus       271 ~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~  339 (406)
T PRK11551        271 GSLLIGALMDRLRPRRVV----------LLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVG-GQSVLYALAPLFYPT  339 (406)
T ss_pred             HHHHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHcch
Confidence            999999999999998865          334444444544444444433233333333333333 334444455566666


Q ss_pred             c-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         239 F-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       239 ~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      + |+++.|+.+...++|+.++|.+.|.+.+..   .++...+.....+.+++.++.+...
T Consensus       340 ~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  396 (406)
T PRK11551        340 QVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG---RSTVGVIGASIPVILVAALAALLLV  396 (406)
T ss_pred             hhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC---CchHHHHHHHHHHHHHHHHHHHHHh
Confidence            5 999999999999999999999999999874   4566667666666666655555443

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.95  E-value=5.1e-26  Score=199.48  Aligned_cols=276  Identities=17%  Similarity=0.201  Sum_probs=171.2

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC--------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG--------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP   72 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (318)
                      ++||+|+++||++.++...+..+|.++++.+...+..        . +|||++|++.++++++ .++....+||+|+..+
T Consensus       143 ~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~-~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~  220 (490)
T PRK10642        143 VAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLD-WGWRIPFFIALPLGII-GLYLRHALEETPAFQQ  220 (490)
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcC-ccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHH
Confidence            3689999999999999999999998888877655432        4 8999999997765554 3444556777764211


Q ss_pred             CCChhHhhhhhhccCccccccccCCcchhhhhcc-hhH-HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhch
Q psy4758          73 FISLEERIYIETSLVHSSTVSSSMKVPWKAILTS-LPV-WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSA  150 (318)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~  150 (318)
                      ..++.++.     .++..+  +.++.++++++++ ++. .......++....++....|+|.|+++.+|++..+.+....
T Consensus       221 ~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~  293 (490)
T PRK10642        221 HVDKLEQG-----DREGLQ--DGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIII  293 (490)
T ss_pred             HHHhhhhh-----cccccc--ccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence            10000000     000000  1223456677763 232 22333344556778888899999998878998887777777


Q ss_pred             HHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHH-HHHHHHHh-cCchhH-HHHHHHHHHHHHhhhcccc
Q psy4758         151 APYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSA-AALVGLSF-VGDNLV-GAITCLTLAIAINAGTYTG  227 (318)
Q Consensus       151 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  227 (318)
                      ...++.+++.++.|+++||+|||+.+          ..+.++.. .+...+.. ..+... .....++.+.+.. .....
T Consensus       294 ~~~~~~~~~~~~~g~l~dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~g~  362 (490)
T PRK10642        294 AIMIGMLFVQPVMGLLSDRFGRRPFV----------ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILN-CFTGV  362 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH-HHHHH
Confidence            77888999999999999999999865          33332222 12221211 122222 2222222222222 22233


Q ss_pred             ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      ...+..+.+|++ |+++.|+.+....+++.++|.+.+++.+..   .+|...++...+..+++.+..++.++.
T Consensus       363 ~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~---~~~~~~~~~~~~~~~i~~~~~~~~pes  432 (490)
T PRK10642        363 MASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST---QNLMMPAYYLMVVAVIGLITGVTMKET  432 (490)
T ss_pred             HHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHHHHHhccc
Confidence            334444667777 999999877777888899999999988763   234555555555555555555555443

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.95  E-value=4.2e-26  Score=197.51  Aligned_cols=287  Identities=16%  Similarity=0.192  Sum_probs=187.1

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHh-h
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER-I   80 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   80 (318)
                      .|++|+++|++++++.+.+.++|..+++.+.+...+...+||+.|++.++++++..++.++++||+|++.+..+.++. .
T Consensus       144 ~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (438)
T TIGR00712       144 VHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN  223 (438)
T ss_pred             HHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc
Confidence            578999999999999999999999999888765444227999999999998888777777778887654221111100 0


Q ss_pred             hhhhccCccccccccCCcc-hhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVP-WKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL  159 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~  159 (318)
                      ...++..++++.+.+.+.. .+.++|+|.+|...+..++.....++...|+|.|+++..|+++.+++....+..+.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig  303 (438)
T TIGR00712       224 DYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPG  303 (438)
T ss_pred             ccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHH
Confidence            0000000000000000111 124678999999888888888888889999999999888999999999999999999999


Q ss_pred             HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc-hhH-HHHHHHHHHHHHhhhccccccccccccCc
Q psy4758         160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD-NLV-GAITCLTLAIAINAGTYTGFLSNHLDLSP  237 (318)
Q Consensus       160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (318)
                      .+++|+++||+++++....       .........++...+...+. +.. .....+.++.+..+.. ........+..|
T Consensus       304 ~~~~g~l~dr~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~  375 (438)
T TIGR00712       304 TLLCGWMSDKVFKGNRGAT-------GVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPV-MLIGLHALELAP  375 (438)
T ss_pred             HHHHHHHHHHhccCcccHH-------HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHH-HHHHHHHHHhcC
Confidence            9999999999976543211       01111111122222222211 121 2222222222221111 111223445566


Q ss_pred             cc-hhhHHHHHHHHHHHHH-hHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         238 NF-AGTLMGFTNGCANIAS-ILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       238 ~~-~~~~~g~~~~~~~~g~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      ++ |++++|+.+...++++ +++|.+.|.+.|.    .+|...+++..++.+++.+..+...+++
T Consensus       376 ~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~  436 (438)
T TIGR00712       376 KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF----FGWDGGFMVMIGGSILAVILLIVVMIGE  436 (438)
T ss_pred             hhheeeehhhhchHHHhhhhhhcchhHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            54 9999999999988875 6899999999998    5788899888887777777766655443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.94  E-value=2.1e-25  Score=194.97  Aligned_cols=267  Identities=16%  Similarity=0.199  Sum_probs=185.7

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|++||+++.++...+..+|.++++.++.++.+...|||..|++.+++.++..+.. ++.||+++..+. +++.+  
T Consensus       133 ~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~-~~~~e~~~~~~~-~~~~~--  208 (491)
T PRK11010        133 TDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT-LLAPEPTDTIPV-PKTLE--  208 (491)
T ss_pred             HHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCcccccc-ccchh--
Confidence            58999999999999999999999999999999998832799999999998877664443 346775432110 00000  


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhch-HHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSA-APYLAQWILI  160 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~-~~~~~~~~~~  160 (318)
                                  +....+++++++++..|...+..++..........+.+.|+.+..|+++.+.+.... ...++.+++.
T Consensus       209 ------------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~  276 (491)
T PRK11010        209 ------------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGA  276 (491)
T ss_pred             ------------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        111235677888888777766666666666677788888887778999999999874 5567899999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHH---HHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAAL---VGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP  237 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (318)
                      +++|+++||+++|+.+          .++.++.++..   ..+....++.........+.....+...+.......+..+
T Consensus       277 ll~G~L~dr~g~~~~l----------~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~  346 (491)
T PRK11010        277 LYGGILMQRLSLFRAL----------MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCN  346 (491)
T ss_pred             HHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999988754          22223222222   2222222222121212222111112222333455555666


Q ss_pred             cc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         238 NF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       238 ~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      ++ +++..|+.+...++|..+++.+.|++.|.    .+|+..|.+.+++.+.+.+.....++
T Consensus       347 ~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~----~G~~~~f~~~~~~~l~~l~~~~~~~~  404 (491)
T PRK11010        347 KSFSATQFALLSALSAVGRVYVGPVAGWFVEA----HGWPTFYLFSVAAAVPGLLLLLVCRQ  404 (491)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHHHHHHHh
Confidence            65 89999999999999999999999999998    67999999999888888777766654

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.94  E-value=3.9e-25  Score=188.05  Aligned_cols=258  Identities=14%  Similarity=0.138  Sum_probs=184.4

Q ss_pred             ccCCCCCchhH--HHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           3 KWAPPMERARL--FSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         3 ~~~~~~~r~~~--~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      |+.|+++|++.  .+....+.++|.+++|.+++.+.+. .|||+.|++.++..++..++.++++||.|+++++.      
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  186 (375)
T TIGR00899       114 EHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG-FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA------  186 (375)
T ss_pred             HHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc------
Confidence            55666666654  6888888999999999999999987 89999999999888777677777788865432110      


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (318)
                                    ..+.+.++.+++|+++......++..........+.|.|+++++|.++.+.+...........++.
T Consensus       187 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~  252 (375)
T TIGR00899       187 --------------LTRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFM  252 (375)
T ss_pred             --------------cCcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence                          001123446677777766666655555555667788999988789999999988777777788889


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccch
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFA  240 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (318)
                      ++.|++.||+++|+.+          ..+.+...+........++.+.......+.+.+. +...+....+..+..|+++
T Consensus       253 ~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~~~~~~~~~~~~~  321 (375)
T TIGR00899       253 LLAGYLIKRFGKRRLM----------LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFI-GILAGIGMLYFQDLMPGRA  321 (375)
T ss_pred             HhHHHHHHHhcchhHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcchh
Confidence            9999999999999865          3344443444333333333222222223333332 2233445556677888888


Q ss_pred             hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      +++.++.+...++|..++|.+.|.+.|.    .+|+..+.+.+++.+++.+.....
T Consensus       322 ~~~~~~~~~~~~~g~~~g~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~  373 (375)
T TIGR00899       322 GAATTLYTNTGRVGWIIAGSVGGILAER----WSYHAVYWFAIVMLIVALFCLLLI  373 (375)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHh----ccchhHHHHHHHHHHHHHHHHhee
Confidence            8999999999999999999999999988    678889988888877777665443

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.94  E-value=6.3e-25  Score=187.43  Aligned_cols=262  Identities=16%  Similarity=0.147  Sum_probs=183.5

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++| ++|+++++++..+..+|..+++.+++.+.++..+||+.+.+.++..++.....+...++.|++++         
T Consensus       123 ~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  192 (393)
T PRK09705        123 KRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSH---------  192 (393)
T ss_pred             HHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc---------
Confidence            46786 78999999999999999999999999988863489999887766655432222222222221100         


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  +++ ...++.+++|+.|...+..++....++....|+|.|+++ +|.+..+++...+...++++++++
T Consensus       193 ------------~~~-~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~  258 (393)
T PRK09705        193 ------------KTT-TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGAL  258 (393)
T ss_pred             ------------CCC-cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHH
Confidence                        000 112345677888888777777788888999999999988 899999999999999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-ch
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FA  240 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  240 (318)
                      +.|++.||+++|+..          ..+..+..++...+...+..... ....+.+.+.....+...........|+ ++
T Consensus       259 ~~g~l~~r~~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~  327 (393)
T PRK09705        259 LMPAMARHQDRRKLL----------MLALVLQLVGFCGFIWLPLQLPV-LWAMVCGLGLGGAFPLCLLLALDHSVQPAIA  327 (393)
T ss_pred             HHHHHHhhccchHHH----------HHHHHHHHHHHHHHHHccchHHH-HHHHHHHHhccchHHHHHHHHHhhcCCHHHH
Confidence            999999999998765          44555555555444333332221 1222333333333333333334444444 49


Q ss_pred             hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758         241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV  301 (318)
Q Consensus       241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (318)
                      ++..|+.+...++++.++|.+.|++.|..   .+|...|.+.+++.++..+....+.++++
T Consensus       328 g~~~g~~~~~~~~~~~~gp~~~G~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (393)
T PRK09705        328 GKLVAFMQGIGFIIAGLAPWFSGVLRSIS---GNYLMDWAFHALCVVGLMIITLRFAPARF  385 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99999999999999999999999999985   35788888888777777666655554433

>TIGR00897 2A0118 polyol permease family

Probab=99.94  E-value=6.5e-25  Score=188.06  Aligned_cols=265  Identities=12%  Similarity=0.136  Sum_probs=184.5

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHH-HhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGN-LVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      .|++|+++|++++|+.+++.++|. +++|.+++++.+. .||+..++......++..++..++.+|.+++++.. ++++ 
T Consensus       131 ~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-  207 (402)
T TIGR00897       131 VYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA-FGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ-TREK-  207 (402)
T ss_pred             HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc-CCcc-
Confidence            367889999999999999999997 6899999998887 89776666554444443344444455543221110 0000 


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (318)
                                .  ++....+++++|+|.++...+..++.....++...+.|.|+++ +|+++.+.+.+.....+++.++.
T Consensus       208 ----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~  274 (402)
T TIGR00897       208 ----------F--SELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFN  274 (402)
T ss_pred             ----------h--hhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHH
Confidence                      0  1112345678999999988888888888888899999999977 89999999988888899999999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH---Hh-cCchhH-HHHHHHHHHHHHhhhcccccccccccc
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL---SF-VGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDL  235 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~---~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (318)
                      +..|+++||+++|+...         ..+.+...+....+   .. ..+... .....+..+.+.... .+ ......+.
T Consensus       275 ~~~g~l~dr~~~~~~~~---------~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~-~~~~~~~~  343 (402)
T TIGR00897       275 VIFGIVGDKLGWMNTVR---------WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGY-VP-LAAVFPTL  343 (402)
T ss_pred             HHHHHHHHhhcchhHHH---------HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH-HH-HHHHHHhh
Confidence            99999999999887541         11222222221111   11 112222 333334444443332 22 23345577


Q ss_pred             CccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         236 SPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       236 ~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      .|++|+++.|+.+...++++.++|.+.|.+.|.    .++...+++.+++.+++.++..+++
T Consensus       344 ~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~----~g~~~~~~~~a~~~~i~~~~~~~~~  401 (402)
T TIGR00897       344 APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF----FGAIGVVWIFAALYVVSAFLTAFIR  401 (402)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cchHHHHHHHHHHHHHHHHHHHHhc
Confidence            788899999999999999999999999999998    6788899988888888777766543

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.94  E-value=4.8e-25  Score=194.00  Aligned_cols=285  Identities=13%  Similarity=0.118  Sum_probs=175.5

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC----------------------CCCCchHHHHHHHHHHHHHHH
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG----------------------SPWGWPSIFYVSGAVAIVWAA   58 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~----------------------~~~gWr~~f~~~~~~~~~~~~   58 (318)
                      ++|++|+++|++++++.+....+|.++++.++..+..                      ..++||+.|.+.++++++. .
T Consensus       140 ~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~  218 (502)
T TIGR00887       140 TSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA-L  218 (502)
T ss_pred             HHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH-H
Confidence            3689999999999999999999999999988876532                      1148999998887777654 4


Q ss_pred             HHHHHhcCCCCC---CCCCChhHhhhhhh----ccCc--cc-c----ccccCCcchhhhhcc---hh----HHHHHHHHH
Q psy4758          59 AWCYIGANSPAQ---HPFISLEERIYIET----SLVH--SS-T----VSSSMKVPWKAILTS---LP----VWAVLITHL  117 (318)
Q Consensus        59 ~~~~~~~~~~~~---~~~~~~~~~~~~~~----~~~~--~~-~----~~~~~~~~~~~~~~~---~~----~~~~~~~~~  117 (318)
                      +..+++||+|+-   +++.+++..+...+    +..+  ++ +    +.+..+.++++++++   ++    .+......+
T Consensus       219 ~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  298 (502)
T TIGR00887       219 YFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWF  298 (502)
T ss_pred             HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            556788999873   22211111111110    0000  00 0    001112357777753   22    222233344


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhcceeechhh------------hchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758         118 CQNWGYWTLLTEMPSYINSVLQFDIKSNGF------------LSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       118 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      .....+++...|.|.++++ .|++..+.+.            ......++.+++.+++++++||+|||+.+         
T Consensus       299 ~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l---------  368 (502)
T TIGR00887       299 LLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ---------  368 (502)
T ss_pred             HHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH---------
Confidence            4555667778889999976 7887653321            12333456677888999999999999865         


Q ss_pred             HHHHHHHHHHHHHHHHhcC---chhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhh
Q psy4758         186 NTIGLWGSAAALVGLSFVG---DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLF  261 (318)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~  261 (318)
                       ..+..+..++..++....   +....................+....+..|.+|++ |+++.|+.+..++++++++|.+
T Consensus       369 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~  447 (502)
T TIGR00887       369 -LMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFG  447 (502)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHH
Confidence             344444444433333221   11111111111122222233445556678999988 9999999999999999999999


Q ss_pred             hheeeccCCC------ccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         262 VGFIVTDNTS------VSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       262 ~g~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      .+.+.|..+.      ..++...|++.+++.+++.+..++++
T Consensus       448 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lp  489 (502)
T TIGR00887       448 FLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIP  489 (502)
T ss_pred             hhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEec
Confidence            9999885321      13455677777777777766554444

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.94  E-value=4e-25  Score=190.43  Aligned_cols=263  Identities=13%  Similarity=0.056  Sum_probs=183.5

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      +.|++|+++|+++.++.....++|..+||.+++.+.+. .+||+.|++.++..++.. +..+.+|+++++++..+ ++. 
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~-~~~-  210 (417)
T PRK10489        135 TPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA-GGVAWNYGLAAAGTFITL-LPLLRLPALPPPPQPRE-HPL-  210 (417)
T ss_pred             hhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH-HHHHhCCCCCCCCcccc-cch-
Confidence            35889999999999999999999999999999999887 899999998877666553 34455666543221100 000 


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (318)
                                   ++....++.++++|.++...+..++.. .......++|.|+++.+|.++.+.+++.+...++.+++.
T Consensus       211 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~  276 (417)
T PRK10489        211 -------------RSLLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA  276 (417)
T ss_pred             -------------HHHHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH
Confidence                         111223556778887766655544433 245677889999998889999999999999999999999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-  239 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (318)
                      ++.+++.||.++++.+          ..+.++..++++.+...++........++.+.+. +...+.......+..|++ 
T Consensus       277 ~~~~~l~~~~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~  345 (417)
T PRK10489        277 LTSGWLAHSARPGLLM----------LLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLS-AISSLLQYTLLQTQTPDEM  345 (417)
T ss_pred             HHHHHhhhccCcchHH----------HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhCCHHH
Confidence            9999999986665544          4455555555555554443322223333333332 223344455666777766 


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      ||+++|+.+...++|..+||.+.|.+.|.    .++...+...+++.++..++....
T Consensus       346 ~g~~~g~~~~~~~~g~~~g~~l~G~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~  398 (417)
T PRK10489        346 LGRINGLWTAQNVTGDAIGAALLGGLGAM----MTPVASASASGFGLLIIGVLLLLV  398 (417)
T ss_pred             HHHHHHHHHHHHhhhHhHHHHHHHHHHHH----hchhhHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999998    566777776666555544444333

>PRK09952 shikimate transporter; Provisional

Probab=99.94  E-value=6.7e-25  Score=189.75  Aligned_cols=268  Identities=15%  Similarity=0.137  Sum_probs=173.1

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC--------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG--------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF   73 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (318)
                      +|++|+++|++..+..+.+..+|.+++..+...+..        . +|||++|++.+++.++. .......||+|+..+ 
T Consensus       151 ~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~-~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~-  227 (438)
T PRK09952        151 VESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLS-WGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQ-  227 (438)
T ss_pred             HHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhc-cChHHHHHHHHHHHHHH-HHHHHhCCCChhHHH-
Confidence            589999999999999999999999999887776652        3 79999999887765442 333334455442110 


Q ss_pred             CChhHhhhhhhccCccccccccCCcc-hhhhhcchhHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchH
Q psy4758          74 ISLEERIYIETSLVHSSTVSSSMKVP-WKAILTSLPVWAVLI-THLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAA  151 (318)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~  151 (318)
                        ..++.      + +    .+++.+ .+.++++|+.+...+ ..++.....+....|.|.|+++.+|++..........
T Consensus       228 --~~~~~------~-~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~  294 (438)
T PRK09952        228 --QQHEQ------A-A----AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLL  294 (438)
T ss_pred             --HHhhc------c-c----ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence              00000      0 0    011112 234667777666543 4555566778888999999988788887765555556


Q ss_pred             HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh---cCchhHHHHHHHHHHHHHhhhccccc
Q psy4758         152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF---VGDNLVGAITCLTLAIAINAGTYTGF  228 (318)
Q Consensus       152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (318)
                      .++..+++.++.|+++||++||+.+          ..+.++..++...+..   ..+..........+.....+...+..
T Consensus       295 ~g~~~~i~~~~~g~l~Dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  364 (438)
T PRK09952        295 VGGLSCLTIPCFAWLADRFGRRRVY----------ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQ  364 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            6777888899999999999999865          3333333332222211   12222222222222222223334445


Q ss_pred             cccccccCccc-hhhHHHHHHHHHH-HHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         229 LSNHLDLSPNF-AGTLMGFTNGCAN-IASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       229 ~~~~~~~~~~~-~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      ..+..|.+|.+ |+++.|+.+...+ +++.++|.+.+++.|.++  .+|...+...+++.+++.+..+..+
T Consensus       365 ~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~--~~~~~~~~~~~~~~~i~~v~~~~~~  433 (438)
T PRK09952        365 QPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG--GSWHSVAIYLLAGCLISAMTALLMK  433 (438)
T ss_pred             HHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHHHHHHHcc
Confidence            56677888877 9999999766654 899999999999988642  3577778777777777777766553

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.94  E-value=5.1e-25  Score=187.35  Aligned_cols=256  Identities=17%  Similarity=0.158  Sum_probs=185.2

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .||+| ++|++++++...+.++|..+++++.+.+.+. .|||+.|++.++++++..+..+++++|+|+++++.++ +.  
T Consensus       117 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--  191 (377)
T TIGR00890       117 VKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL-EGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNI-EV--  191 (377)
T ss_pred             HHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCc-cc--
Confidence            35676 6899999999999999998877777777776 8999999999998888777777776664432111000 00  


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  ++++.+.++.+|+|.++...+..++..........+.+.|.++ +|.+..+.+...+...++.+++++
T Consensus       192 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  258 (377)
T TIGR00890       192 ------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRP  258 (377)
T ss_pred             ------------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        1112345678889988888777776666666666777777766 788888888889999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HH-HHHHHHHHHHhhhccccccccccccCccc
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GA-ITCLTLAIAINAGTYTGFLSNHLDLSPNF  239 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (318)
                      +.|++.||++||+.+          ..+..+..++.......++... .. ......+.+. +...+.......|..|++
T Consensus       259 ~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~~~~~~~~~~~~  327 (377)
T TIGR00890       259 FLGALSDKIGRQKTM----------SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTW-GGTISLFPSLVSDIFGPA  327 (377)
T ss_pred             HHHHHHHHHhhhhhh----------hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHh-ccchhccHHHHHHHhhhh
Confidence            999999999999876          5555666666655555443222 12 2222233222 223344445555666665


Q ss_pred             -hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHH
Q psy4758         240 -AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGN  290 (318)
Q Consensus       240 -~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  290 (318)
                       |+++.|+.+...++|+.++|.+.|.+.|.    .+|+..|.+.+++.+++.
T Consensus       328 ~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~----~g~~~~f~~~~~~~~~~~  375 (377)
T TIGR00890       328 NSAANYGFLYTAKAVAGIFGGLIASHALTE----IGFEYTFIVTGAFALTSL  375 (377)
T ss_pred             hhhhHhHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHHHHHHhc
Confidence             99999999999999999999999999988    678889888877766654

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.93  E-value=9.5e-25  Score=188.71  Aligned_cols=261  Identities=15%  Similarity=0.078  Sum_probs=170.3

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC--------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG--------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP   72 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (318)
                      ++|++|+++|+++.++.+.+...|.++++.+...+..        . +|||++|++.++++++. ......+||+|+.  
T Consensus       149 i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~~--  224 (432)
T PRK10406        149 MSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELRE-WGWRIPFALGAVLAVVA-LWLRRQLDETSQQ--  224 (432)
T ss_pred             HHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc-cchHHHHHHHHHHHHHH-HHHHhcCCCCchH--
Confidence            3689999999999999999999998888877665542        4 79999999988777654 3333344554321  


Q ss_pred             CCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHH-HHHHHHHHHhhhhhhhhhhhcceeechhhhchH
Q psy4758          73 FISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLC-QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAA  151 (318)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~  151 (318)
                           +++.            .++..++++++|+|+.+...+...+ ....++.+..|+|.|+++.+|++..+.+.....
T Consensus       225 -----~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i  287 (432)
T PRK10406        225 -----ETRA------------LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTA  287 (432)
T ss_pred             -----HHhh------------hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence                 1000            1112357888999888876665544 366778889999999988789998888888888


Q ss_pred             HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH-HH--HhcCchhHHHHHHHHHHHHHhhhccccc
Q psy4758         152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV-GL--SFVGDNLVGAITCLTLAIAINAGTYTGF  228 (318)
Q Consensus       152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (318)
                      ..+...++.++.|+++||++||+.+          ....++..+... ..  ....+..........++.+......+..
T Consensus       288 ~~~~~~i~~~~~G~l~Dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (432)
T PRK10406        288 ALFVFMLIQPLIGALSDKIGRRTSM----------LCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSIS  357 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888899999999999999854          222222222111 11  1111122222222222222222223345


Q ss_pred             cccccccCccc-hhhHHHHHHHHHHH-HHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         229 LSNHLDLSPNF-AGTLMGFTNGCANI-ASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       229 ~~~~~~~~~~~-~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      ..+..|.+|++ |++++|+.+...++ ++...|.+.+.+ +.+   ..|...++..+++.+++.+..+.+
T Consensus       358 ~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~---g~~~~~~~~~~~~~~i~~~~~~~l  423 (432)
T PRK10406        358 GILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSI---GMETAFFWYVTLMAVVAFLVSLML  423 (432)
T ss_pred             HHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHh---CCCcHHHHHHHHHHHHHHHHHHHh
Confidence            56677888887 99999999988775 345577877754 543   335556666666666666555544

>PRK03699 putative transporter; Provisional

Probab=99.93  E-value=1.7e-24  Score=185.02  Aligned_cols=263  Identities=16%  Similarity=0.171  Sum_probs=184.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|+++++..+....+|..++|.+.+.+.....|||+.|.+.+++.++..++.++  ++.|+.+++.+  ++  
T Consensus       121 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~~~~~~--~~--  194 (394)
T PRK03699        121 THVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPALGKHAP--KA--  194 (394)
T ss_pred             hhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccccccCc--cc--
Confidence            5788999999999999999999999999998887653379999999988877765443332  23332111100  00  


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                              ++  +.    .++ ..++.++...+..++.....+.+..|+|.|+++.+|+|+.+.+.+.+...++..++.+
T Consensus       195 --------~~--~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~  259 (394)
T PRK03699        195 --------DK--PV----AKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMW  259 (394)
T ss_pred             --------cC--cc----ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHH
Confidence                    00  00    011 1246677777777777777888899999999888899999999999999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchh
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG  241 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (318)
                      +.|+++||+++|+.+          .....+..+.+.++...++........+..+.+.. ...+.......+..|++++
T Consensus       260 ~~g~l~dr~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~  328 (394)
T PRK03699        260 IFSFIVRFFDLQRIL----------TVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSS-AIYTTIITLGSQQTKVASP  328 (394)
T ss_pred             HHHHHHHHhchhhHH----------HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHccCCCH
Confidence            999999999999865          33444444444444444443333333334443333 2334444445555666677


Q ss_pred             hHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       242 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      +..+......++|+.++|.+.|++.|.    .+++..++..+++.+++.+......+.+
T Consensus       329 ~~~g~~~~~~~~g~~i~p~~~G~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (394)
T PRK03699        329 KLVNFILTCGTIGTMLTFVVTSPIVAH----FGLQAALLTANGLYAVVFVMCILLGFVS  383 (394)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHH----hCchhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            888999999999999999999999998    6788888888888777766665555433

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.93  E-value=1.3e-24  Score=185.04  Aligned_cols=260  Identities=17%  Similarity=0.160  Sum_probs=179.7

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++...+..+|..+++++++.+.+. .|||+.|++.+++.++..+..++.+||.+++++.   +.   
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~---~~---  189 (382)
T PRK10091        117 SKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE-FSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG---GL---  189 (382)
T ss_pred             HHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc---CH---
Confidence            5788999999999999999999999999999999887 8999999999988877666666667775432110   00   


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                     +. ..+.+|++..+......++.....+....+.+.++++.+|+++.+.+.+.....++.+++.+
T Consensus       190 ---------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~  253 (382)
T PRK10091        190 ---------------RE-QFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNL  253 (382)
T ss_pred             ---------------HH-HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhH
Confidence                           01 12356777777766655555555666667788888877899999999999999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHhhhccccccccccccCccc-
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDN-LVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-  239 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (318)
                      +.|++.||+++|+.+          ..+..+.+++.+.+....+. +......+..+.+......+.......+..+++ 
T Consensus       254 ~~g~l~~r~~~~~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  323 (382)
T PRK10091        254 LSGRLSGRYSPLRIA----------AVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL  323 (382)
T ss_pred             HHheeccccCchhHH----------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH
Confidence            999999999998865          44555555555444332222 222222233333333323322323333433333 


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      ++.+  ..+...++|.++||.+.|.+.|.+   .+|+..+...+++.++.........++
T Consensus       324 ~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (382)
T PRK10091        324 LGAA--GGQIAFNLGSAIGAYCGGMMLTLG---LAYNYVALPAALLSFAAMSSLLLYGRY  378 (382)
T ss_pred             HHHH--HHHHHHHHHHHHHHHHhHHHHHcc---cCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence            5444  346778999999999999999974   578888888776666655554444433

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.93  E-value=2.8e-24  Score=183.64  Aligned_cols=256  Identities=12%  Similarity=0.104  Sum_probs=172.8

Q ss_pred             ccCCCCCc--hhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           3 KWAPPMER--ARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         3 ~~~~~~~r--~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      |+.++++|  +...++.+++.++|.+++|++++.+.++ .|||..|++.++.+++.+++.++.+||.+++++..+ ++. 
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-  208 (393)
T PRK15011        132 EHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG-FSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT-GTL-  208 (393)
T ss_pred             HHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc-ccc-
Confidence            44555544  3456888999999999999999999987 899999999998888877777777888654322110 000 


Q ss_pred             hhhhccCccccccccCCcchhhhhcc-hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTS-LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL  159 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~  159 (318)
                                   +.    .   .++ +..+......+........+..+.|.|+++.+|+++.+.+.+.+...++.+++
T Consensus       209 -------------~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~  268 (393)
T PRK15011        209 -------------EA----P---RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPT  268 (393)
T ss_pred             -------------cc----c---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence                         00    0   112 22233333334444455566678999998888999999998887777888889


Q ss_pred             HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc
Q psy4758         160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF  239 (318)
Q Consensus       160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (318)
                      .++.|+++||+++|+.+          ..+.....+........++.. .......+.....+...+....+..|..|++
T Consensus       269 ~~~~G~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~  337 (393)
T PRK15011        269 MLIAGYFAKRLGKRFLM----------RVAAVAGVCFYAGMLMAHSPA-ILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ  337 (393)
T ss_pred             HHHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999854          233333333332333233322 2222222121111222222334556778888


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      ++++.++.+...++|..++|.+.|.+.|.    .+|+..+.+.+++.+++.+..+..
T Consensus       338 ~g~~~~~~~~~~~lg~~~g~~l~G~i~~~----~g~~~~~~~~~~~~~~~~~~~~~~  390 (393)
T PRK15011        338 AGSATTLYTNTSRVGWIIAGSLAGIVAEI----WNYHAVFWFALVMIIATLFCLLRI  390 (393)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999998    678989888887777777666554

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.93  E-value=2.7e-25  Score=192.96  Aligned_cols=275  Identities=15%  Similarity=0.159  Sum_probs=180.9

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CCChhHhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP-FISLEERI   80 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   80 (318)
                      .|+++ ++|++++|+.+.+..+|..++|.+++.+.+. .|||++|++.+++.++..+..++..++.+.++. +.++++..
T Consensus       134 ~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~-~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  211 (455)
T TIGR00892       134 GKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES-FGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGL  211 (455)
T ss_pred             HHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccC
Confidence            46775 7899999999999999999999999999887 899999999998887665544444333221100 00000000


Q ss_pred             hhhhccCccccc--c-ccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHH
Q psy4758          81 YIETSLVHSSTV--S-SSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQW  157 (318)
Q Consensus        81 ~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~  157 (318)
                      ......++.+..  . +..+....+++++|.++...+..++...+.+....++|.|+++ .|+++.+++.+.+..+++.+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~  290 (455)
T TIGR00892       212 PPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDI  290 (455)
T ss_pred             CCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHH
Confidence            000000000000  0 0011111257889999988888888888888888899999987 79999999999999999999


Q ss_pred             HHHHHHHHhHHHHh--hhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccccccc
Q psy4758         158 ILILVFSWLADYIV--AKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDL  235 (318)
Q Consensus       158 ~~~~~~g~l~dr~g--~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (318)
                      +++++.|++.||..  +++..        ....+.+..++..++....++.+.+.+..++.+.+... ..+.......+.
T Consensus       291 ~~~~~~g~l~d~~~~~~~~~~--------~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~-~~~~~~~~~~~~  361 (455)
T TIGR00892       291 FARPSCGLIAGLKWIRPHVQY--------LFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGS-VGALLFEVLMDL  361 (455)
T ss_pred             HHHHHHHHHhcccccCHHHHH--------HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhch-HHHHHHHHHHHH
Confidence            99999999999732  22211        11223333333333444444433234444444444333 333444444455


Q ss_pred             Ccc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHH
Q psy4758         236 SPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNL  291 (318)
Q Consensus       236 ~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (318)
                      .|+ +++++.|+.+...++|++++|.+.|.+.|..   .+|+..|++.+++.+++.+
T Consensus       362 ~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~---g~~~~~f~~~~~~~li~~~  415 (455)
T TIGR00892       362 VGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDAT---KNYKYIFYASGSIVVSAGL  415 (455)
T ss_pred             hhHHHHhhHHhHHHHHHHHHHHccccceeeeehhc---CCcchHHHHhhHHHHHHHH
Confidence            454 5999999999999999999999999999974   3588888887776666554

>KOG2533|consensus

Probab=99.93  E-value=4.8e-25  Score=188.74  Aligned_cols=267  Identities=14%  Similarity=0.153  Sum_probs=185.4

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC-----CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG-----SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFIS   75 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-----~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (318)
                      ++.||.++||++.+|++.+..++|.++|++++..+.+     ...||||.|++.|+++++.+++.++++|+.|.+..-.+
T Consensus       159 lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~  238 (495)
T KOG2533|consen  159 LGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLT  238 (495)
T ss_pred             HHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccc
Confidence            3579999999999999999999999999999998642     12799999999999999999999999999998776666


Q ss_pred             hhHhhhhhhccCcccccc---ccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHH
Q psy4758          76 LEERIYIETSLVHSSTVS---SSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAP  152 (318)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~  152 (318)
                      ++|+....++.+++++..   +.+...+++.+++|.+|...+..++.....+++.+|+|.|+++..|+|..++..+..+.
T Consensus       239 ~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~  318 (495)
T KOG2533|consen  239 DEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPY  318 (495)
T ss_pred             hHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchH
Confidence            666554444333332221   24556778889999999999999999999999999999999996679999999999999


Q ss_pred             HHHHHHHHHHHHHhHHHHh----hhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccc
Q psy4758         153 YLAQWILILVFSWLADYIV----AKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGF  228 (318)
Q Consensus       153 ~~~~~~~~~~~g~l~dr~g----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (318)
                      .++++++.+++|.++||..    +|...         .....+...++...+.............+....+.........
T Consensus       319 ~~~g~v~~i~ag~lsdr~~~~~~~~~~~---------~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (495)
T KOG2533|consen  319 DVGGIVGLILAGYLSDRLKTIFARRLLF---------IVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIAL  389 (495)
T ss_pred             HhhhHHHHHHHHHHHHHHhhhHHHHHHH---------HHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHH
Confidence            9999999999999999953    33322         2334444444544444443233222222222222222222222


Q ss_pred             cccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhe-eeccCCCccchHHHHH
Q psy4758         229 LSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGF-IVTDNTSVSQWQTIFL  280 (318)
Q Consensus       229 ~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~-l~~~~~~~~~~~~~~~  280 (318)
                      ........++. +-+..+......+.++.++|.+.-. ....    ..|...|.
T Consensus       390 ~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~----y~~~~~f~  439 (495)
T KOG2533|consen  390 SWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPR----YGWGAVFY  439 (495)
T ss_pred             hhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcc----hhhhhHHH
Confidence            22223334443 5555555566666666655555332 2222    45666663

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.93  E-value=1.5e-23  Score=180.14  Aligned_cols=240  Identities=13%  Similarity=0.062  Sum_probs=172.9

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++.+++......+|..++|.+++.+.+. .+||+.|++.++..++..+..++..||+++++++..+ .   
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---  201 (406)
T PRK15402        127 QESFEEADAIKITALMANVALLAPLLGPLVGAALIHV-LPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLS-L---  201 (406)
T ss_pred             HHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCccHHHHHHHHHHHHHHHHHHHhCCCCCcccccccc-H---
Confidence            4788999999999999998899999999999999887 8999999998888887766666666765432211000 0   


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  ++...++++++++|.++...+..++..........+.|.++++.+|+++.+.+.......++.+++.+
T Consensus       202 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~  269 (406)
T PRK15402        202 ------------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNL  269 (406)
T ss_pred             ------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        11123456788999998888777777666667777889998887899999988887777888999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc---Cc-hhH-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV---GD-NLV-GAITCLTLAIAINAGTYTGFLSNHLDLS  236 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (318)
                      +.|++.||+++|+.+          ..+.++..++...+...   .+ ... ......+.+.+.... .+..........
T Consensus       270 ~~g~l~~r~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~-~~~~~~~~~~~~  338 (406)
T PRK15402        270 TLARLTSRRPLRSLI----------RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLA-NAGLYRLTLFSS  338 (406)
T ss_pred             HHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHH-hhhHHHHHhhhc
Confidence            999999999998865          44544444444444322   11 221 223333344443332 223223333445


Q ss_pred             ccchhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         237 PNFAGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       237 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      ++++|+..+..+..+.++..+|+.+.+.+.+..
T Consensus       339 ~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~  371 (406)
T PRK15402        339 DVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG  371 (406)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence            567999999999999999999999999998883

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.93  E-value=9.1e-25  Score=191.74  Aligned_cols=282  Identities=16%  Similarity=0.132  Sum_probs=171.0

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC-------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG-------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF   73 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (318)
                      ++|++|+++|++++++.+.+..+|.++++.++..+..       ...|||+.|++.+++.++.. +..+++||+|+....
T Consensus       145 i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~~s~~~l~~  223 (479)
T PRK10077        145 IAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL-MLLYFVPETPRYLMS  223 (479)
T ss_pred             HHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH-HHHHcCCCCcHHHHH
Confidence            4699999999999999999999999999888776542       12799999999888777764 446678988753111


Q ss_pred             -CChhHhhhhhhccCccccccccCCcchhhhhc-----chhHH------H---HHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy4758          74 -ISLEERIYIETSLVHSSTVSSSMKVPWKAILT-----SLPVW------A---VLITHLCQNWGYWTLLTEMPSYINSVL  138 (318)
Q Consensus        74 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~---~~~~~~~~~~~~~~~~~~~p~~l~~~~  138 (318)
                       .++++.+...++....++. +....+.++.++     .+..+      .   .....+....+++....+.|.++++ .
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~  301 (479)
T PRK10077        224 RGKQEQAEGILRKIMGNTLA-TQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-L  301 (479)
T ss_pred             cCCHHHHHHHHHHHcCChhH-HHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-c
Confidence             1111111111111000000 000000111111     01100      0   0111112222334445667877766 7


Q ss_pred             cceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc--Cc-hhH-HHHHHH
Q psy4758         139 QFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV--GD-NLV-GAITCL  214 (318)
Q Consensus       139 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~-~~~-~~~~~~  214 (318)
                      |++...........++..+++.+++++++||+|+|+.+          ..+.++.+++.+.+...  .+ ... .....+
T Consensus       302 g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~----------i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~  371 (479)
T PRK10077        302 GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ----------IIGALGMAIGMFSLGTAFYTQAPGIVALLSML  371 (479)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH----------HHhHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence            88877777777778888999999999999999999866          45555555555444322  11 111 222223


Q ss_pred             HHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee------ccCCCccchHHHHHHHHHHHH
Q psy4758         215 TLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV------TDNTSVSQWQTIFLIAAAIFF  287 (318)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~------~~~~~~~~~~~~~~~~~~~~~  287 (318)
                      ..+.++.....+.......|.+|++ |+++.|+.+...++++.+++.+.+.+.      |.    .++...|++.++..+
T Consensus       372 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~  447 (479)
T PRK10077        372 FYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAH----FHNGFSYWIYGCMGV  447 (479)
T ss_pred             HHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhh----ccCccHHHHHHHHHH
Confidence            3333333333355667777888766 999999999999999998877665443      33    566777877777767


Q ss_pred             HHHHHHHhhccc
Q psy4758         288 FGNLIFLIFGTS  299 (318)
Q Consensus       288 ~~~~~~~~~~~~  299 (318)
                      ++.++.+...++
T Consensus       448 ~~~~~~~~~~~e  459 (479)
T PRK10077        448 LAALFMWKFVPE  459 (479)
T ss_pred             HHHHHHHhcccc
Confidence            666665554443

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.93  E-value=6.9e-24  Score=186.16  Aligned_cols=253  Identities=12%  Similarity=0.062  Sum_probs=182.9

Q ss_pred             ccC-CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CChhHhh
Q psy4758           3 KWA-PPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF-ISLEERI   80 (318)
Q Consensus         3 ~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   80 (318)
                      +++ |+++|++++|+......+|..+||.+++++.+. .||||.|++...++++..++..+++||+++++++ .+..+..
T Consensus       121 ~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~-~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~  199 (495)
T PRK14995        121 ATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH-FYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHAL  199 (495)
T ss_pred             HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHH
Confidence            444 678999999999999999999999999999998 9999999999888888777777788886543221 1111100


Q ss_pred             -----------hhhhccCcc-----------------------ccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHH
Q psy4758          81 -----------YIETSLVHS-----------------------STVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTL  126 (318)
Q Consensus        81 -----------~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (318)
                                 ...+.....                       +.+ .+++.-..+++|+|.+....+..++.....++.
T Consensus       200 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~-~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~  278 (495)
T PRK14995        200 MLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLA-ASRPMIDMRLFTHRIILSGVVMAMTAMITLVGF  278 (495)
T ss_pred             HHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHH
Confidence                       000000000                       000 111222246889999988888888888888888


Q ss_pred             HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC--
Q psy4758         127 LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG--  204 (318)
Q Consensus       127 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--  204 (318)
                      ..+.|.|+++.+|+++.++|....+..++..++.++.|++.||+|+|+.+          ..+.++..++...+....  
T Consensus       279 ~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~g~~~~~~~~~~l~~~~~~  348 (495)
T PRK14995        279 ELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA----------TGGMALSALSFYGLAMTDFS  348 (495)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999999999999999999988755          455555555554443322  


Q ss_pred             -chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758         205 -DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVT  267 (318)
Q Consensus       205 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~  267 (318)
                       +........++.+.+.+....+.......+.++++++.+.++.+..+++|+.+|+.+.|.+.+
T Consensus       349 ~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~  412 (495)
T PRK14995        349 TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS  412 (495)
T ss_pred             CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             222233344455555544444445555555556669999999999999999999999888764

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.93  E-value=1.9e-24  Score=186.93  Aligned_cols=253  Identities=16%  Similarity=0.166  Sum_probs=161.6

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++...+.++|.++++.+.+.+.+. .+||+.|++..+..++ ........||+++..     +++. 
T Consensus       132 ~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~-~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~~-----~~~~-  203 (426)
T PRK12307        132 VESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA-YGWRAAFFVGLLPVLL-VIYIRARAPESKEWE-----EAKL-  203 (426)
T ss_pred             HHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc-CCHHHHHHHHHHHHHH-HHHHHHHCCCChHHH-----Hhhh-
Confidence            5889999999999999999999999999999998887 8999999885433322 122222223322110     0000 


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHH---HHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITH---LCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI  158 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~  158 (318)
                       .+..++++...+....++++++++|.++......   +......+.+..++|.|+++ .|+++.+.+...+...++.++
T Consensus       204 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~  281 (426)
T PRK12307        204 -SGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVL  281 (426)
T ss_pred             -hccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence             0000000000011123567888888776543322   22233334567889999988 699999999888888999999


Q ss_pred             HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHh-hhccccccccccccCc
Q psy4758         159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAIN-AGTYTGFLSNHLDLSP  237 (318)
Q Consensus       159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  237 (318)
                      +.++.|++.||+++|+.+          ..+.++..+....+...++..........++.+.. ....+.......|..|
T Consensus       282 g~~~~g~l~dr~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  351 (426)
T PRK12307        282 GNIVWGLCADRIGLKKTF----------SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFP  351 (426)
T ss_pred             HHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCc
Confidence            999999999999998865          44444444444333333322222222222222221 1122333344567777


Q ss_pred             cc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHH
Q psy4758         238 NF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTI  278 (318)
Q Consensus       238 ~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~  278 (318)
                      ++ ||+++|+.+...++++.++|.+.|++.|.    .++...
T Consensus       352 ~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~----~g~~~~  389 (426)
T PRK12307        352 LEVRGLGTGLIYNLAATSGTFNSMAATWLGIT----MGLGAA  389 (426)
T ss_pred             HHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc----ccHHHH
Confidence            76 99999999999999999999999999988    455443

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.92  E-value=3.8e-24  Score=187.69  Aligned_cols=281  Identities=16%  Similarity=0.112  Sum_probs=181.7

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHH---HHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVA---GLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQH--PFIS   75 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~---~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   75 (318)
                      ++|++|+++|++++++.+.+..+|.++++.++   ....+. .+||+.|++.++..++. ++..+++||+|+..  +...
T Consensus       152 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~~w~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~  229 (481)
T TIGR00879       152 LSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT-LGWRIPLGLQLIPAGLL-FLGLFFLPESPRWLVGKGRV  229 (481)
T ss_pred             HHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCC-ccHHHHHHHHHHHHHHH-HHHHhcCCCChHHHHHcCCh
Confidence            36899999999999999999999999999999   555566 89999999966555544 45566678876421  0001


Q ss_pred             hhHhhhhhhccCcccc-----------------ccccCCcchhhhhc------chhHHHHHHHHHHHHHHHHHHHhhhhh
Q psy4758          76 LEERIYIETSLVHSST-----------------VSSSMKVPWKAILT------SLPVWAVLITHLCQNWGYWTLLTEMPS  132 (318)
Q Consensus        76 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~  132 (318)
                      ++..+...+....++.                 +.+..+..++++++      .+.++...+..+...........+.|.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (481)
T TIGR00879       230 EEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPT  309 (481)
T ss_pred             HHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHH
Confidence            1101100000000000                 00000111233333      223333333344334444455667777


Q ss_pred             hhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH---hcC-c---
Q psy4758         133 YINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS---FVG-D---  205 (318)
Q Consensus       133 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~~~-~---  205 (318)
                      ++++ .|++..+.+.......++.+++.++.|+++||+++|+.+          ..++++..++.+.+.   ... +   
T Consensus       310 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (481)
T TIGR00879       310 IFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL----------LIGAAGMAICLFVLGILGASFVTGSS  378 (481)
T ss_pred             HHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHhhcccCCcc
Confidence            7766 799998888888888999999999999999999999865          444555555544443   111 1   


Q ss_pred             ---hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758         206 ---NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI  281 (318)
Q Consensus       206 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  281 (318)
                         .............++.....+.......|..|++ |+++.|+.+...+++++++|.+.+.+.+.    .+|...|++
T Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~----~~~~~~f~~  454 (481)
T TIGR00879       379 KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES----IGVGGVFIF  454 (481)
T ss_pred             cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCccceehh
Confidence               1112233333333444444455666667877776 99999999999999999999999999888    578888888


Q ss_pred             HHHHHHHHHHHHHhhcc
Q psy4758         282 AAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       282 ~~~~~~~~~~~~~~~~~  298 (318)
                      .+++++++.++.....+
T Consensus       455 ~~~~~~~~~i~~~~~~~  471 (481)
T TIGR00879       455 FGGLNVLGLIFVYFFLP  471 (481)
T ss_pred             HHHHHHHHHHHHheecc
Confidence            88887777766655443

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.92  E-value=1.9e-23  Score=178.26  Aligned_cols=251  Identities=13%  Similarity=0.167  Sum_probs=174.0

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+|+|++++++...+.++|.+++|++++.+.+. +|||+.|++.++++++..+......||+|++++         
T Consensus       134 ~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~---------  203 (394)
T PRK10213        134 MRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL-IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPS---------  203 (394)
T ss_pred             HHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccc---------
Confidence            5899999999999999999999999999999999998 899999999887776654444444555432110         


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                   +...+.++.+|+|.++...+..++.....+....+.+.++.+++|+++.+.+......+++.+++.+
T Consensus       204 -------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~  270 (394)
T PRK10213        204 -------------HQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTS  270 (394)
T ss_pred             -------------cchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHH
Confidence                         0111245678899988877776666666767777764444445899999999999999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchh
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG  241 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (318)
                      +.+++.||.+++...          ....+.....+.+....++.+......++.+.+. ....+.......+..|++++
T Consensus       271 ~~~~l~~r~~~~~l~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~~  339 (394)
T PRK10213        271 LSSFILKRSVKLALA----------GAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTF-ALVPVGWSTWITRSLADQAE  339 (394)
T ss_pred             HHHHHHhccchhHHH----------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHCcccHH
Confidence            999999995433221          2222222232333333333332333334444333 33445455445555677777


Q ss_pred             hHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHH
Q psy4758         242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGN  290 (318)
Q Consensus       242 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  290 (318)
                      ++.++.....++|..+||.++|++.|.    .++...+...+++.++..
T Consensus       340 ~~~~~~~~~~~lg~~~G~~l~G~l~~~----~g~~~~~~~~~~~~~~~~  384 (394)
T PRK10213        340 KAGSIQVAVIQLANTCGAAIGGYALDN----IGLTSPLMLSGTLMLLTA  384 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhc----cChhhHHHHHHHHHHHHH
Confidence            888888888899999999999999998    567777777665554443

>PRK10504 putative transporter; Provisional

Probab=99.92  E-value=1.3e-23  Score=183.89  Aligned_cols=254  Identities=15%  Similarity=0.118  Sum_probs=175.1

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++.....++|..++|.+++.+.+. .|||+.|++..+...+..++.....|+.+.+..+.+......
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~-~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~  202 (471)
T PRK10504        124 MKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY-ASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLL  202 (471)
T ss_pred             HHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHH
Confidence            5788999999999999999999999999999999998 899999999888777766666666665543332222111000


Q ss_pred             -----------hhhccCc-----------------------cccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHH
Q psy4758          82 -----------IETSLVH-----------------------SSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLL  127 (318)
Q Consensus        82 -----------~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (318)
                                 .......                       ++++.+++..+. +++|||+++......++.........
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~  281 (471)
T PRK10504        203 LAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLP  281 (471)
T ss_pred             HHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHH
Confidence                       0000000                       001001122233 57899999988888888888877777


Q ss_pred             hhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-ch
Q psy4758         128 TEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG-DN  206 (318)
Q Consensus       128 ~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~  206 (318)
                      .+.|.|+++..|.++.+.++......++.+++.++.+++.||+++|+.+          ..+..+..+...++.... ..
T Consensus       282 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~  351 (471)
T PRK10504        282 FMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL----------VATTLGLALVSLLFMLVALLG  351 (471)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHHHHHhccccc
Confidence            8899999877899999999998888888899999999999999999865          445554554444444332 22


Q ss_pred             hH--HHHHHHHHHHHHhhhccccccccccccCc-cchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         207 LV--GAITCLTLAIAINAGTYTGFLSNHLDLSP-NFAGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       207 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      +.  .....+..+.+..... +.......+..| ++++.++|+.++..++|..+|+.+.|.+.+.
T Consensus       352 ~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~  415 (471)
T PRK10504        352 WYYLLPFVLFLQGMVNSTRF-SSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL  415 (471)
T ss_pred             cHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            21  1222233333333222 233333334444 4599999999999999999999999998776

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.92  E-value=1.6e-24  Score=184.42  Aligned_cols=263  Identities=18%  Similarity=0.190  Sum_probs=177.4

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHH-HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTL-PVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~-~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      +|++|+++|++++++.+.+..+|..+++ .++..+.+. .+||+.|++.+++.++..++.+++.||+|++++..++++..
T Consensus       109 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (379)
T TIGR00881       109 TKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-YSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP  187 (379)
T ss_pred             HHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCc
Confidence            5889999999999999999999999999 577777776 89999999999888877777777777766543211111110


Q ss_pred             hhh--hccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758          81 YIE--TSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI  158 (318)
Q Consensus        81 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~  158 (318)
                      ..+  +..++++++.+..+...++++++|.++...+..++..........+.|.|+++..|+++.+.+.......++.++
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  267 (379)
T TIGR00881       188 NEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLV  267 (379)
T ss_pred             ccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcch
Confidence            000  000000000012223456778899999998888888888889999999999988899999999999999999999


Q ss_pred             HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc-hhH-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758         159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD-NLV-GAITCLTLAIAINAGTYTGFLSNHLDLS  236 (318)
Q Consensus       159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (318)
                      +.++.|++.||..+++....       .........++.......+. ... .....+..+..... ..........+..
T Consensus       268 ~~~~~g~l~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~  339 (379)
T TIGR00881       268 GTLLAGWLSDKLFNGRRGPL-------AVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYG-PQMLIGVIASELA  339 (379)
T ss_pred             hHHHHHHHHHHHcCCcchHH-------HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhh-hhHHHHHHHHHhc
Confidence            99999999999755442211       11112222222222222212 111 22222333322222 2223334455666


Q ss_pred             ccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHH
Q psy4758         237 PNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQT  277 (318)
Q Consensus       237 ~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~  277 (318)
                      |++ |+++.|+.+...++|+.++|.+.|.+.|.    .+|+.
T Consensus       340 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~----~g~~~  377 (379)
T TIGR00881       340 PKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG----FGWAG  377 (379)
T ss_pred             CcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh----hcccc
Confidence            655 99999999999999999999999999998    55654

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.92  E-value=5e-23  Score=175.76  Aligned_cols=237  Identities=17%  Similarity=0.162  Sum_probs=170.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++.+....+|..+++.+++.+.+. .+||+.|++.++..++..+..++..||+++++++.+.     
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  192 (385)
T TIGR00710       119 RDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-LSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQI-----  192 (385)
T ss_pred             HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCCH-----
Confidence            5889999999999999999999999999999999887 8999999999888877766666667765543221111     


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  +....++++++|+|+++...+...+.....+....+.|.++++.+|.++.+.+.+.....++.+++.+
T Consensus       193 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~  260 (385)
T TIGR00710       193 ------------STYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGF  260 (385)
T ss_pred             ------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        11113456788899998888777777777888888999999887999999999999999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc---C-chhHH-HHHHHHHHHHHhhhccccccccccccC
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV---G-DNLVG-AITCLTLAIAINAGTYTGFLSNHLDLS  236 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (318)
                      +.|++.||+++|+.+          ..+..+..++..++...   . +.... .......+.+... ..+.......|..
T Consensus       261 ~~g~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~  329 (385)
T TIGR00710       261 LNGRFIKKWGAKSLL----------RMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSM-ISSIAMAYALEDF  329 (385)
T ss_pred             HHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH-HHHHHHHHHhccC
Confidence            999999999998865          33444444333333221   1 11112 2222223333332 3344444555666


Q ss_pred             ccchhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758         237 PNFAGTLMGFTNGCANIASILGPLFVGFIVT  267 (318)
Q Consensus       237 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~  267 (318)
                      |++++++.++.+.....++.+.+.+.+.+.+
T Consensus       330 ~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~  360 (385)
T TIGR00710       330 PHVAGTASALFGTLRLVLGAIVGYLVSLIHG  360 (385)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            7779999999999988777666666664443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.92  E-value=3.7e-23  Score=177.32  Aligned_cols=265  Identities=13%  Similarity=0.083  Sum_probs=173.1

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+|||+++.++...+.++|.++++.++..+.+...|||..|++.+++.++..+ ..+..||+++++++. ++.+  
T Consensus       120 ~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l-~~~~~~e~~~~~~~~-~~~~--  195 (402)
T PRK11902        120 TDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL-TTLWAPEPEVPARPP-RSLG--  195 (402)
T ss_pred             HHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH-HHHhcCCCccccccc-chhH--
Confidence            588999999999999999999999999999999988525999999998887766533 345566654322111 0000  


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHH-HHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPY-LAQWILI  160 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~-~~~~~~~  160 (318)
                                  ++...++++++|||.++...+..++..........+.+.++.+.+|+++.+.+++....+ ++.+++.
T Consensus       196 ------------~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~  263 (402)
T PRK11902        196 ------------EAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGA  263 (402)
T ss_pred             ------------HHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHH
Confidence                        111235678899999888777666665554444455566677768999999998876654 4688999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHH---HHHHHhcCchhHHHHHHH-H---HHHHHhhhcccccccccc
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAA---LVGLSFVGDNLVGAITCL-T---LAIAINAGTYTGFLSNHL  233 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~  233 (318)
                      +++|++.||+++|+.+          ..+..+..+.   +......+++.+...... .   .................+
T Consensus       264 ~~~g~l~~r~g~~~~l----------~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  333 (402)
T PRK11902        264 LAGGTLMVRLGLYRSL----------MLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCN  333 (402)
T ss_pred             HHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999988854          2333332322   222233333322222221 1   111112222333344444


Q ss_pred             ccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         234 DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       234 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      +..|   ++..++.+...+++...++.+.|.+.|.    .+|+..|.+.+++.+++.++....+++
T Consensus       334 ~~~~---~~~~~~~~~~~~l~~~~~~~~~G~l~~~----~G~~~~f~~~~~~~~~~~~~~~~~~~~  392 (402)
T PRK11902        334 RSFS---ATQYALLSALASVGRVYVGPTSGYLVEA----YGWPGFYLMTVVIALPGLALLWLMRGT  392 (402)
T ss_pred             CCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4444   4455666666777887777789999999    789999988888887776665444433

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.92  E-value=2.8e-23  Score=178.70  Aligned_cols=263  Identities=18%  Similarity=0.204  Sum_probs=178.2

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++...+..+|.+++|.+++.+.+. .+||+.|++.+++.++..+...+++||++++.++.++.+   
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  207 (408)
T PRK09874        132 ATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS-YGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEMLH---  207 (408)
T ss_pred             HHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhH---
Confidence            4678999999999999999999999999999999887 899999999998887776767777777543211100000   


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHH-HHHHHHHHHHHHHHHhhhhhhhhhhhcceee---chhhhchHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAV-LITHLCQNWGYWTLLTEMPSYINSVLQFDIK---SNGFLSAAPYLAQW  157 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~---~~~~~~~~~~~~~~  157 (318)
                                     ..+..+.+++|+++.. ....+...........++|.|..+..+....   ..+.+....+++.+
T Consensus       208 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~  272 (408)
T PRK09874        208 ---------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAAL  272 (408)
T ss_pred             ---------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence                           0112344566665543 2333334444455667788888774332211   23445556677888


Q ss_pred             HHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc
Q psy4758         158 ILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP  237 (318)
Q Consensus       158 ~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (318)
                      ++.+..|++.||+++|+.+          ..+..+..+..+.....++.+...+..++.+.+... ..+.......+..|
T Consensus       273 ~~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~  341 (408)
T PRK09874        273 LSAPRLGKLGDRIGPEKIL----------ITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGA-LLPAVQTLLVYNSS  341 (408)
T ss_pred             HHHHHHHHHHhccccchhH----------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHh-hHHHHHHHHHHhCC
Confidence            8899999999999999876          445555555555554444433233333344443333 33333333344444


Q ss_pred             -cchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         238 -NFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       238 -~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                       +++|+.+++.+...++|..+||.+.|.+.+.    .+|+..|++.+++.+++.+......+
T Consensus       342 ~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~----~g~~~~f~~~~~~~l~~~~~~~~~~~  399 (408)
T PRK09874        342 NQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN----YGFRAVFLVTAGVVLFNAVYSWNSLR  399 (408)
T ss_pred             cccceeeehHHHHHHHHHHHhhHHHHHHHHhh----cchhHHHHHHHHHHHHHHHHHHHHHH
Confidence             4599999999999999999999999999888    68999999998888887776655433

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.92  E-value=6.3e-24  Score=179.88  Aligned_cols=243  Identities=14%  Similarity=0.110  Sum_probs=175.4

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHH-hcCCCCCCCCCChhHh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYI-GANSPAQHPFISLEER   79 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   79 (318)
                      +.|++|+++|++++++.+.+..+|.+++|.+++.+.+. .|||+.|++.++..++..++.+.. .||+++++++ +.+++
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  194 (365)
T TIGR00900       117 LPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT-LGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQ-ALSNA  194 (365)
T ss_pred             HHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHhcccccCCCcccc-ccchh
Confidence            36899999999999999999999999999999999987 899999999877666554433332 2222211111 00000


Q ss_pred             hhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758          80 IYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLL-TEMPSYINSVLQFDIKSNGFLSAAPYLAQWI  158 (318)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~  158 (318)
                      ..            ++....+++++|+|.++...+..+.......... .+.|.+.++.+|.++.+.+.......++.++
T Consensus       195 ~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (365)
T TIGR00900       195 VL------------RDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALL  262 (365)
T ss_pred             HH------------HHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence            00            1122346678889999888887777777776666 8889999887899999999999999999999


Q ss_pred             HHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHhhhccccccccccccCc
Q psy4758         159 LILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD-NLVGAITCLTLAIAINAGTYTGFLSNHLDLSP  237 (318)
Q Consensus       159 ~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (318)
                      +.++.+++.||.++++.+          ..+..+.++........++ .....+..+..+.+... ..+.......+..|
T Consensus       263 ~~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~  331 (365)
T TIGR00900       263 GALLLGLLGRYFKRMALM----------TGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGP-INVPQGTLLQRRVP  331 (365)
T ss_pred             HHHHHHHHHHHhchhHHH----------HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCC
Confidence            999999999999988765          4445555555555555443 22233334444444333 34455555556666


Q ss_pred             cc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         238 NF-AGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       238 ~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      ++ |+++.|+.+...+++..++|.+.|.+.|.
T Consensus       332 ~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~  363 (365)
T TIGR00900       332 AELLGRVFGAQFSLSHAAWPLGLILAGPLADH  363 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55 99999999999999999999999998876

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.92  E-value=5.9e-23  Score=174.80  Aligned_cols=236  Identities=17%  Similarity=0.209  Sum_probs=163.4

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++.+.+..+|..++|.+++.+.+. .+||+.|++.+++.++..++..+.+||+++++++.+.+.   
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  180 (377)
T PRK11102        105 RDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-FSWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHL---  180 (377)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCCh---
Confidence            5789999999999999999999999999999999987 899999999988888776666677777543221110000   


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  ++...++++++++|.++...+..++.....+.+..+.|.++.+.+|+++.+.+.......++.+++.+
T Consensus       181 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~  248 (377)
T PRK11102        181 ------------RTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTI  248 (377)
T ss_pred             ------------HHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        11123456788899888877777777777778888889888887899999999999999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHH---HHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGS---AAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN  238 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (318)
                      +.|++.||+|+|+.+          ..+..+.   .+........+..............+..............+..|+
T Consensus       249 ~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (377)
T PRK11102        249 INSRFVRRVGALNML----------RFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH  318 (377)
T ss_pred             HHHHHHHHhCHHHHH----------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc
Confidence            999999999999865          3333222   222222222222222112222122222222233333445566787


Q ss_pred             chhhHHHHHHHHHH-HHHhHhhhhhh
Q psy4758         239 FAGTLMGFTNGCAN-IASILGPLFVG  263 (318)
Q Consensus       239 ~~~~~~g~~~~~~~-~g~~~~~~~~g  263 (318)
                      +++++.++.+.... ++..+++.+.+
T Consensus       319 ~~g~~~~~~~~~~~~~g~~~g~~~~~  344 (377)
T PRK11102        319 MAGTASSLAGTLRFGIGAIVGALLSL  344 (377)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            79999999877654 55666666644

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.92  E-value=2.1e-23  Score=187.19  Aligned_cols=279  Identities=16%  Similarity=0.109  Sum_probs=186.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC------------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS------------PWGWPSIFYVSGAVAIVWAAAWCYIGANSPA   69 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~   69 (318)
                      +|++|+++|++.++++.++..+|.++++.++..+...            ..+||+.|++.++++++. ++..+++||+|+
T Consensus       281 sE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPr  359 (742)
T TIGR01299       281 AEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPR  359 (742)
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHH
Confidence            5889999999999999999999999999888776542            136999998887766554 566778899986


Q ss_pred             CCCC-CChhHhhhhhhcc------------------------Ccc---c-cccccC----------------Ccchhhhh
Q psy4758          70 QHPF-ISLEERIYIETSL------------------------VHS---S-TVSSSM----------------KVPWKAIL  104 (318)
Q Consensus        70 ~~~~-~~~~~~~~~~~~~------------------------~~~---~-~~~~~~----------------~~~~~~~~  104 (318)
                      .... .+.++.....++.                        ..+   + ++....                ..++++++
T Consensus       360 wL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf  439 (742)
T TIGR01299       360 FFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCF  439 (742)
T ss_pred             HHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHc
Confidence            2100 0001000000000                        000   0 000000                01244555


Q ss_pred             cc---hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh----h-------------------------------------cc
Q psy4758         105 TS---LPVWAVLITHLCQNWGYWTLLTEMPSYINSV----L-------------------------------------QF  140 (318)
Q Consensus       105 ~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~-------------------------------------g~  140 (318)
                      +.   ++.+.+++.+++..++++++..|+|.++.+.    +                                     |+
T Consensus       440 ~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  519 (742)
T TIGR01299       440 NPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGL  519 (742)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcc
Confidence            54   4567788889999999999999999886441    0                                     00


Q ss_pred             -----e---------------e-----------------------------------------------------echhh
Q psy4758         141 -----D---------------I-----------------------------------------------------KSNGF  147 (318)
Q Consensus       141 -----~---------------~-----------------------------------------------------~~~~~  147 (318)
                           +               .                                                     .....
T Consensus       520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~  599 (742)
T TIGR01299       520 KFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYF  599 (742)
T ss_pred             cccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHH
Confidence                 0               0                                                     00122


Q ss_pred             hchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccc
Q psy4758         148 LSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTG  227 (318)
Q Consensus       148 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (318)
                      ...+..++.+++.+++|+++||+|||+.+          ..++++.+++.+++.+.++.....+..++++++ .....+.
T Consensus       600 ~~~l~~l~~i~G~il~g~L~Dr~GRr~~l----------~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~-~~~~~~~  668 (742)
T TIGR01299       600 VNFLGTLAVLPGNIVSALLMDKIGRLRML----------AGSMVLSCISCFFLSFGNSESAMIALLCLFGGL-SIAAWNA  668 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH-HHHHHHH
Confidence            24455688899999999999999999976          667777777777776665544333333333333 3334556


Q ss_pred             ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      ...+..|++|++ |++++|+.+...++|++++|.+++.+.+.     +...+|++.+++.++++++.++++
T Consensus       669 ~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-----~~~~pf~i~a~~lll~~ll~~~LP  734 (742)
T TIGR01299       669 LDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-----TKAAPILFASAALACGGLLALKLP  734 (742)
T ss_pred             HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHhCC
Confidence            777888998888 99999999999999999999999988765     245677777777777777666664

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.91  E-value=6.6e-23  Score=175.81  Aligned_cols=255  Identities=15%  Similarity=0.141  Sum_probs=170.2

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++.+.+..+|.++++.+++.+.+. .|||+.+++.++.+++...    ..++.|++++. + ++   
T Consensus       138 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~-~~---  207 (399)
T PRK05122        138 IGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW-GGLAGLGLLIMLLALLGLL----LARPRPAVPPV-K-GE---  207 (399)
T ss_pred             HhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHH----HHhcCCCCCCC-C-cc---
Confidence            4788999999999999999999999999999999888 8999998886665543321    12222221110 0 00   


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                     +.++++.++  +++.......+....+.....+.|.|+++ .|.  .+.+.......++.+++.+
T Consensus       208 ---------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~  267 (399)
T PRK05122        208 ---------------RLPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARL  267 (399)
T ss_pred             ---------------chhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHH
Confidence                           012233333  22222233334455556677788888876 565  3455666777888899999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc-cch
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP-NFA  240 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  240 (318)
                      +.|++.||+++|+.+          ..+..+..++.......++........++.+.+..... +.......+..| ++|
T Consensus       268 ~~g~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~  336 (399)
T PRK05122        268 LFGNLINRLGGLRVA----------IVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVF-PALGVEAVKRVPPQNR  336 (399)
T ss_pred             HHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHH-HHHHHHHHHhCCHHHH
Confidence            999999999988865          45555555555555555443333333344444443332 332233334444 559


Q ss_pred             hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758         241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV  301 (318)
Q Consensus       241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (318)
                      +++.|+.+...++|..++|.+.|.+.|.    .+|+..+++.+++.+++.+.....+++++
T Consensus       337 g~~~g~~~~~~~~g~~~~~~~~g~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (399)
T PRK05122        337 GAALGAYSVFLDLSLGITGPLAGLVASW----FGYPSIFLAAALAALLGLALTWLLYRRAP  393 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            9999999999999999999999999988    67999999888888887777666655433

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.91  E-value=3.4e-23  Score=175.91  Aligned_cols=262  Identities=9%  Similarity=-0.014  Sum_probs=177.8

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHh-----CC------------CCCchHHHHHHHHHHHHHHHHHHHH
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA-----GS------------PWGWPSIFYVSGAVAIVWAAAWCYI   63 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~-----~~------------~~gWr~~f~~~~~~~~~~~~~~~~~   63 (318)
                      +++|+|+++||+++|+.....++|..+++++...+.     ..            ..+||.++++..++.++..++.+++
T Consensus       152 vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~  231 (462)
T PRK15034        152 ISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG  231 (462)
T ss_pred             HHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            367999999999999997777777766655554322     11            1458888888888888776777766


Q ss_pred             hcCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceee
Q psy4758          64 GANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIK  143 (318)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~  143 (318)
                      .+|.|++                       +....+.++++|+|+.|.+++.+++.+.++.++..++|.|+++.+  +..
T Consensus       232 ~~~~~~~-----------------------~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~  286 (462)
T PRK15034        232 MNDIASS-----------------------RASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDV  286 (462)
T ss_pred             CCCcccc-----------------------ccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChH
Confidence            5553321                       111123557899999999999999999999999999999998844  333


Q ss_pred             chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH-HHHhcCc----hhHHHHHHHHHHH
Q psy4758         144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV-GLSFVGD----NLVGAITCLTLAI  218 (318)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~  218 (318)
                      ..........+...+..+++|+++||+|+++.+          .++++...+... .+...+.    ........++...
T Consensus       287 ~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl----------~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~  356 (462)
T PRK15034        287 NILRLAFFGPFIGAIARSVGGAISDKFGGVRVT----------LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLF  356 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH----------HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHH
Confidence            333333444677888899999999999999876          334443333322 1222221    1112222222222


Q ss_pred             HHhhhccccccccccccCcc----------------------chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchH
Q psy4758         219 AINAGTYTGFLSNHLDLSPN----------------------FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQ  276 (318)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~  276 (318)
                      ...+.......-...+.+|+                      +.|.+.|+....+.+|+++-|.+.|...+.+   .++.
T Consensus       357 ~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~---g~~~  433 (462)
T PRK15034        357 LTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT---GSPV  433 (462)
T ss_pred             HHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc---CCcH
Confidence            33333333444333344442                      4778999999999999999999999998886   5688


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         277 TIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      ..|+.+.+..+++.++.+....++
T Consensus       434 ~~~~~~~~~~~~~~~~~w~~y~r~  457 (462)
T PRK15034        434 GAMKVFLIFYIVCVLLTWLVYGRR  457 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccC
Confidence            899999999999988887765443

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.91  E-value=4.8e-23  Score=176.13  Aligned_cols=259  Identities=12%  Similarity=0.098  Sum_probs=171.4

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++|+.....++|..+||.+++++. . .|||+.|++.++..++..++..+..||.++++.   +     
T Consensus       125 ~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~-~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~---~-----  194 (400)
T PRK11646        125 IKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q-YDFRLVCATGAVLFVLAAAFNAWLLPAYKLSTV---R-----  194 (400)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-hhHHHHHHHHHHHHHHHHHHHHHhCCccccccc---c-----
Confidence            57889999999999999999999999999999998 4 899999999888777765555555554321100   0     


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  ++.+.++++++++|.++...+..+...........++|.|+++. +.++.+.+.+.+...+....+..
T Consensus       195 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~g~l~~~~~~~~~~~~~  261 (400)
T PRK11646        195 ------------TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI-AGSPSAVKWMYAIEACLSLTLLY  261 (400)
T ss_pred             ------------hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh-cCCchHHHHHHHHHHHHHHHHHH
Confidence                        11123466788898887665555544444444567889999884 44778888887777776665555


Q ss_pred             HHHHhHHH-HhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-c
Q psy4758         162 VFSWLADY-IVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-F  239 (318)
Q Consensus       162 ~~g~l~dr-~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  239 (318)
                      ..+++.|| ++.++.+          ..+.++.+++...+...++...........+.+.. ...+.......+..|+ +
T Consensus       262 ~~~~~~~~r~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~-~~~p~~~~~~~~~~p~~~  330 (400)
T PRK11646        262 PIARWSEKRFRLEHRL----------MAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSI-IAEPARETLSASLADARA  330 (400)
T ss_pred             HHHHHHHHhcchhHHH----------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHccHHHHHHhcCCccc
Confidence            55665554 5444432          44555556666555555443322222233333333 3334445555566555 5


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      ||+++|+.+...++|..+||.+.|.+.|.+++.......+...+.+.+++.+...
T Consensus       331 ~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (400)
T PRK11646        331 RGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY  385 (400)
T ss_pred             chhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999853222234555555555555544433

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.91  E-value=8.6e-23  Score=173.80  Aligned_cols=251  Identities=12%  Similarity=-0.010  Sum_probs=186.1

Q ss_pred             CCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhcc
Q psy4758           7 PMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSL   86 (318)
Q Consensus         7 ~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (318)
                      +++|++.+|......++|.+++|++++.+.+. +|||..|++.+...++. ++.. .++|+++++++.  ++++      
T Consensus       123 ~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~-~g~~~~f~~~~~~~~~~-~~~~-~~~~~~~~~~~~--~~~~------  191 (382)
T TIGR00902       123 QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM-FDEQNILAILTAGLAFM-LIGF-LIKPTIPPKDAI--PEDE------  191 (382)
T ss_pred             HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH-cChhHHHHHHHHHHHHH-HHHH-HcCCCCCCCccc--cccc------
Confidence            47889999999999999999999999999998 89999998876553322 2333 333332111110  0000      


Q ss_pred             CccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHh
Q psy4758          87 VHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWL  166 (318)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l  166 (318)
                             +.+..+.++++|+|+++...+..++...+...+..+.|.|+++ .|.++.+.|.+.....++.+++.++.+++
T Consensus       192 -------~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l  263 (382)
T TIGR00902       192 -------SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKL  263 (382)
T ss_pred             -------cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHH
Confidence                   1122346789999999999998898888999999999999988 89999999999998889999999999999


Q ss_pred             HHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHH
Q psy4758         167 ADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGF  246 (318)
Q Consensus       167 ~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  246 (318)
                      .||++.|+.+          ..+.+...+....+.+.++.+.......+.+..+.... +....+..+.++++++++.++
T Consensus       264 ~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~-~~~~~~i~~~~~~~~~~~q~~  332 (382)
T TIGR00902       264 FQNCSARDLL----------LISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCH-LAAMRYIAAQPGSEIAKLQAL  332 (382)
T ss_pred             HhhCCHHHHH----------HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHhhHHHHHHH
Confidence            9999999876          67777888777777766555434444555555544433 334445556644459999999


Q ss_pred             HHH-HHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHH
Q psy4758         247 TNG-CANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLI  292 (318)
Q Consensus       247 ~~~-~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (318)
                      ++. ...+|..++|.++|++.|.    .++ ..|...+++.+++.++
T Consensus       333 ~~~~~~g~g~~~g~~~~G~l~~~----~g~-~~~~~~~~~~~~~~~~  374 (382)
T TIGR00902       333 YNALAMGGLIAIFTAFAGFIYPT----LGA-GTFVFMAIIAAAAFFL  374 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh----ccH-HHHHHHHHHHHHHHHH
Confidence            874 5678999999999999999    454 5676777766665444

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.91  E-value=1.9e-23  Score=183.78  Aligned_cols=256  Identities=13%  Similarity=0.124  Sum_probs=184.4

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-ChhHhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI-SLEERI   80 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   80 (318)
                      .|++|+++|++++++...+..+|..++|.+++++.+. .+||+.|++.++++++..++..+.+||+++++++. +.....
T Consensus       116 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~  194 (485)
T TIGR00711       116 LNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN-YHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLL  194 (485)
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC-cCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHH
Confidence            5889999999999999999999999999999999998 99999999999888877677777777654332211 110000


Q ss_pred             -----------hhhhccCccc-----------------------cccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHH
Q psy4758          81 -----------YIETSLVHSS-----------------------TVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTL  126 (318)
Q Consensus        81 -----------~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (318)
                                 ...+..+.+.                       +..++++....+++++|.++...+..++.....+..
T Consensus       195 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (485)
T TIGR00711       195 LLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGS  274 (485)
T ss_pred             HHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence                       0000000000                       000111122246788999998888888888888889


Q ss_pred             HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh--cC
Q psy4758         127 LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF--VG  204 (318)
Q Consensus       127 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~  204 (318)
                      ..++|.|+++.+|+++.+++.......++.+++.++.|++.||+++|+.+          ..+..+..++...+..  .+
T Consensus       275 ~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~----------~~g~~~~~~~~~~~~~~~~~  344 (485)
T TIGR00711       275 FYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV----------TIGLILYAVGFYWRAFTFTP  344 (485)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH----------HHHHHHHHHHHHHHhccCCC
Confidence            99999999998999999999999999999999999999999999998865          5566666666555542  12


Q ss_pred             ch-hH-HHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         205 DN-LV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       205 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      +. .. .....++.+.+.+....+.......+.++++++++.|+.+..+++|+.+|+.+.+.+.++
T Consensus       345 ~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~  410 (485)
T TIGR00711       345 DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN  410 (485)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22 21 333334444444443334444444555556699999999999999999999999998875

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK15075 citrate-proton symporter; Provisional

Probab=99.91  E-value=9.1e-23  Score=176.50  Aligned_cols=240  Identities=12%  Similarity=0.137  Sum_probs=149.2

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHh--------CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA--------GSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP   72 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~--------~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (318)
                      ++|++|+++|++++++...+.++|..+++.+++.+.        +. .|||++|++..+...+     .++.++.+++.+
T Consensus       142 ~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~-~gWr~~f~~~~~~~~~-----~~~~~~~~~e~~  215 (434)
T PRK15075        142 LAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAE-WGWRIPFLIGCLIVPF-----IFLIRRSLEETE  215 (434)
T ss_pred             HHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc-cchHHHHHHHHHHHHH-----HHHHHHhcCCCH
Confidence            368999999999999999998888888888877763        34 8999999975433221     112223222211


Q ss_pred             CCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHH-HHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchH
Q psy4758          73 FISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAV-LITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAA  151 (318)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~  151 (318)
                      +   ..++.  +      +  .+.+..+++..++++.+.. .+..++....++....|.|.|+++.+|++..+.++....
T Consensus       216 ~---~~~~~--~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~  282 (434)
T PRK15075        216 E---FLARK--H------R--PSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLC  282 (434)
T ss_pred             H---HHHhh--h------c--cccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence            0   00000  0      0  1111224444555555443 333444566677888999999998889999988888888


Q ss_pred             HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHH-HHHHH-Hh-cCchhH-HHHHHHHHHHHHhhhcccc
Q psy4758         152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAA-ALVGL-SF-VGDNLV-GAITCLTLAIAINAGTYTG  227 (318)
Q Consensus       152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~-~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  227 (318)
                      ..++++++.++.|+++||+++|+.+          ..+..+..+ ..... .. ..+... ......+.+.+. +...+.
T Consensus       283 ~~~~~~~~~~~~g~l~Dr~g~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~  351 (434)
T PRK15075        283 VGVSNFIWLPIGGALSDRIGRRPVL----------IAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLY-GSYNGA  351 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH-HHHHhh
Confidence            8899999999999999999999865          222222211 11111 11 111111 112122222222 222333


Q ss_pred             ccccccccCccc-hhhHHHHHHHHHHH-HHhHhhhhhheeeccCC
Q psy4758         228 FLSNHLDLSPNF-AGTLMGFTNGCANI-ASILGPLFVGFIVTDNT  270 (318)
Q Consensus       228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~  270 (318)
                      ......|..|++ |+++.|+.+...+. ++.++|.+.|++.|..+
T Consensus       352 ~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g  396 (434)
T PRK15075        352 MVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG  396 (434)
T ss_pred             HHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence            334556667766 99999997666554 58889999999999853

>PRK11043 putative transporter; Provisional

Probab=99.90  E-value=4.2e-22  Score=170.89  Aligned_cols=236  Identities=16%  Similarity=0.128  Sum_probs=164.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|++++++..+.......+|..++|.+++++.+. .|||+.|++.+++.++..++.+ .++|+++++++        
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------  189 (401)
T PRK11043        120 IDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-FGWQAIFATLFAITLLLILPTL-RLKPSKKARKQ--------  189 (401)
T ss_pred             HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHH-HcCCCCCcccc--------
Confidence            5889999999999999999999999999999999988 8999999998888777655444 34443321110        


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  ++++.++++++|+|+++...+........++....+.|.++++ .|+++.+.+.......++..++.+
T Consensus       190 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~  256 (401)
T PRK11043        190 ------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGY  256 (401)
T ss_pred             ------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        1112346788889888876666666666777778889998877 799999999888878888999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc-CchhH-HHHHHHHHHHHHhhhccccccccccccCccc
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV-GDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF  239 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (318)
                      +.+++.||+++|+....       ......+..+.+...... .+... ........+.+. +...+.......+..|++
T Consensus       257 ~~~~l~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  328 (401)
T PRK11043        257 GCRAALQKWGGEQLLPW-------LLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAAN-GAIYPIVVAQALRPFPQA  328 (401)
T ss_pred             HHHHHHHHcCHHHHHHH-------HHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhCccc
Confidence            99999999998875411       112222222222222221 22222 222222333333 333344444444556778


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      +|++.|+.+..+..++..++.+.|.+.|.
T Consensus       329 ~g~~~g~~~~~~~~~~~~~~~~~g~l~~~  357 (401)
T PRK11043        329 TGKAAALQNTLQLGLCFLASLLVSALIST  357 (401)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            99999999999999999999999999875

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.90  E-value=2.6e-22  Score=171.69  Aligned_cols=231  Identities=14%  Similarity=0.086  Sum_probs=154.2

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++.+....+|..++|.+++.+.+. .+||+.|++.++++++..++....+||+++++++.+      
T Consensus       117 ~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~-~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------  189 (392)
T PRK10473        117 RDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK-FPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAA------  189 (392)
T ss_pred             HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCc------
Confidence            5789999999999999999999999999999998877 899999999998888877777777777643221100      


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  .......++.+++|.++...+...+.......+..+.|.++++.+|+++.+.+.......++.+++.+
T Consensus       190 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~  257 (392)
T PRK10473        190 ------------SSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSF  257 (392)
T ss_pred             ------------cchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        01112344667888877666665555555566677788888887899999999998999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc--
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF--  239 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  239 (318)
                      +.+++.||+++|+.+          ..+..+..++...+..................+........   ...+..|.+  
T Consensus       258 ~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~~~~~~  324 (392)
T PRK10473        258 STPFALGIFKPRTLM----------LTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA---MSQALGPFSLR  324 (392)
T ss_pred             HHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH---HHHHhccCccc
Confidence            999999999999865          45555555555554444333322222222222222221111   112233332  


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      .+.+.++    ..++..+++.+.+++.+.
T Consensus       325 ~g~~~~~----~~~~~~~g~~~~~~l~~~  349 (392)
T PRK10473        325 AGVASST----LGIAQVCGSSLWIWLAAV  349 (392)
T ss_pred             ccHHHHH----HHHHHHHHHHHHHHHHHH
Confidence            3444444    445555666666666665

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.90  E-value=4.9e-23  Score=177.60  Aligned_cols=264  Identities=14%  Similarity=0.134  Sum_probs=176.9

Q ss_pred             CCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccC
Q psy4758           8 MERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLV   87 (318)
Q Consensus         8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (318)
                      +++++.+|......++|..++|++++.+.+  .+||++|++.++++++..++.++..+|++++.+.. +++..       
T Consensus       137 ~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~--~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------  206 (420)
T PRK09528        137 RRSGFEYGRARMWGSLGWALCAFIAGILFN--INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA-NALGA-------  206 (420)
T ss_pred             hhccccchhhHHhhhHHHHHHHHHHHHHHh--cCchHhHHHHHHHHHHHHHHHhcccccccchhhhc-cchhc-------
Confidence            467788899999999999999999999876  58999999988887776555554444433221100 00000       


Q ss_pred             ccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh---cceeechhhhchHHHHHHHHHHHHHH
Q psy4758          88 HSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVL---QFDIKSNGFLSAAPYLAQWILILVFS  164 (318)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g  164 (318)
                       +++  +....+.++.+|||.++...+..+.....+.....+.|.|+.+..   +.+..+.+.+.+...+...++.++.|
T Consensus       207 -~~~--~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g  283 (420)
T PRK09528        207 -NAS--AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAP  283 (420)
T ss_pred             -ccc--cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence             000  112233556788998877666555555555556667788876643   45556778888888888999999999


Q ss_pred             HhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhH
Q psy4758         165 WLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTL  243 (318)
Q Consensus       165 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  243 (318)
                      ++.||+++|+.+          ..+.++..+...+..+.++.+.......+.+..... .......+..+..|++ +++.
T Consensus       284 ~l~dr~g~~~~~----------~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~a~~  352 (420)
T PRK09528        284 FIINRIGAKNAL----------LLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPF-LLVGVFKYITLNFDVRLSATI  352 (420)
T ss_pred             HHHHHhCcchhh----------HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCccceeee
Confidence            999999999976          556666666666666655544333333333332222 2223334444545555 8877


Q ss_pred             HHH-HHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         244 MGF-TNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       244 ~g~-~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      .+. .+...++|..++|.+.|++.|.    .+|+..|...+++.++..++.....++
T Consensus       353 ~~~~~~~~~~lg~~ig~~~~G~l~~~----~G~~~~f~~~~~~~~i~~~~~~~~~~~  405 (420)
T PRK09528        353 YLVGFQFAKQLGAVFLSTLAGNLYDS----IGFQGTYLILGGIVLLFTLISVFTLSG  405 (420)
T ss_pred             eeehHHHHHHHHHHHHHHHHHHHHHh----hCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence            665 5777889999999999999998    679999998888877766655554443

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.90  E-value=1.2e-22  Score=173.74  Aligned_cols=257  Identities=19%  Similarity=0.196  Sum_probs=170.3

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC-------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG-------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF   73 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (318)
                      ++|++|+++|++.+++.+.+..+|.++++.++..+..       ...+||+.|++.+++.++. .......||+++.++ 
T Consensus       121 ~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-  198 (394)
T TIGR00883       121 LAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIG-LYLRRNLEETPVFEK-  198 (394)
T ss_pred             hhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHH-HHHHHhcCCChhHHH-
Confidence            4689999999999999999999999999998876642       1279999999877665543 333344455432111 


Q ss_pred             CChhHhhhhhhccCccccccccCCcchhhhhcchh--HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchH
Q psy4758          74 ISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLP--VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAA  151 (318)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~  151 (318)
                        ++++.             +..+.+.++.+++++  ++......++.....+....++|.|+++.+|.++.+.+.....
T Consensus       199 --~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  263 (394)
T TIGR00883       199 --AQEKH-------------KKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLML  263 (394)
T ss_pred             --HHhcc-------------ccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHH
Confidence              00000             222345667777765  7777777777777888888999999988789999999999999


Q ss_pred             HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHH-HHHHhc-CchhHHHHHHHHHHHHHhhhcccccc
Q psy4758         152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAAL-VGLSFV-GDNLVGAITCLTLAIAINAGTYTGFL  229 (318)
Q Consensus       152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (318)
                      ..+...++.++.|++.||+++|+.+.         ..+........ ...... .++...............+...+...
T Consensus       264 ~~~~~~~~~~~~g~l~dr~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  334 (394)
T TIGR00883       264 SLILFFITIPLSGALSDRIGRRPVLI---------IFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMG  334 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhchHHHHH---------HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHH
Confidence            99999999999999999999998551         11222222221 111121 22222222222222222333445556


Q ss_pred             ccccccCccc-hhhHHHHH-HHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHH
Q psy4758         230 SNHLDLSPNF-AGTLMGFT-NGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIF  286 (318)
Q Consensus       230 ~~~~~~~~~~-~~~~~g~~-~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  286 (318)
                      ....|..|++ |+++.++. +....+|+.++|.+.|++.|+.+   .|...++...++.
T Consensus       335 ~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g---~~~~~~~~~~~~~  390 (394)
T TIGR00883       335 SFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG---DWYAIGYYLAALA  390 (394)
T ss_pred             HHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC---cchhHHHHHHHHH
Confidence            6666777766 99999985 44456788899999999999842   2555555554443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR00898 2A0119 cation transport protein

Probab=99.90  E-value=4.9e-22  Score=175.51  Aligned_cols=274  Identities=13%  Similarity=0.089  Sum_probs=175.8

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CChhHh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF-ISLEER   79 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   79 (318)
                      +.|++|+++|+++.++...+..+|.++++.++..+.    +||+.|++.+++.++..+.. +++||+|+.... .+.++.
T Consensus       205 ~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~wr~~~~~~~i~~~~~~~~~-~~~~esp~~l~~~~~~~~a  279 (505)
T TIGR00898       205 NTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFLLS-WFVPESPRWLISQGRIEEA  279 (505)
T ss_pred             hheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHH-HhcCCChHHHHHCCCHHHH
Confidence            468999999999999999999999999999887653    49999999998887764444 678998752110 011111


Q ss_pred             -hhhhh---cc-----------C-ccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceee
Q psy4758          80 -IYIET---SL-----------V-HSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIK  143 (318)
Q Consensus        80 -~~~~~---~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~  143 (318)
                       +..++   ..           . +++.+.+.++.++++++++|.++...+......+........++.+..+ .+.+. 
T Consensus       280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-  357 (505)
T TIGR00898       280 LKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-LGGNI-  357 (505)
T ss_pred             HHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCCh-
Confidence             00000   00           0 0000001123577889999887766655544433333222223333333 44442 


Q ss_pred             chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHHhh
Q psy4758         144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNL-VGAITCLTLAIAINA  222 (318)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  222 (318)
                        .......++..+++.++.+++.||+|||+.+          ..+.++.+++.+++...++.. ........++.+...
T Consensus       358 --~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  425 (505)
T TIGR00898       358 --YLDLFISGLVELPAKLITLLLIDRLGRRYTM----------AASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGIT  425 (505)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence              2333455677888999999999999999866          556666666666665555442 222233333333333


Q ss_pred             hccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         223 GTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       223 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      ...+....+..|.+|++ |++++|+.+....+|+.++|.+.+ + +.    .++...+.+.+++.+++.+...++++.
T Consensus       426 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~----~~~~~~~~~~~~~~~~~~~~~~~lpet  497 (505)
T TIGR00898       426 SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GE----KWLFLPLVLFGGLALLAGILTLFLPET  497 (505)
T ss_pred             HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HH----HHHhhHHHHHHHHHHHHHHHHHcCcCC
Confidence            44455667778888887 999999999999999999999998 4 33    345667777777777776666665543

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.90  E-value=1.2e-22  Score=174.44  Aligned_cols=264  Identities=13%  Similarity=0.164  Sum_probs=162.6

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCC--chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhH-
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWG--WPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEE-   78 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~g--Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   78 (318)
                      .|++|+++|++++++.+.+..+|.++++.+++.+.+. .+  ||+.|++.++..++. ++....+||+++..+..++++ 
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~-~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  203 (405)
T TIGR00891       126 IESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV-WGDGWRALFFISILPIIFA-LWLRKNIPEAEDWKEKHAGKAL  203 (405)
T ss_pred             HHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCccHHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHhhhhhh
Confidence            5889999999999999999999999999999998875 55  999998866555443 444555676543211111100 


Q ss_pred             h-hhhhhccCccccccc---cCCcchhhhhcc--hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHH
Q psy4758          79 R-IYIETSLVHSSTVSS---SMKVPWKAILTS--LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAP  152 (318)
Q Consensus        79 ~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~  152 (318)
                      . +...+..++++....   +.....++..++  +.+........+..........++|.|+.+.+|+++.+.+.+....
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~  283 (405)
T TIGR00891       204 VRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFS  283 (405)
T ss_pred             hhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHH
Confidence            0 000000000000000   000011111111  1122333333444455556678899999888899999999999999


Q ss_pred             HHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH-HHHhcCchhHHHHHHHHHHHHHhhhcccccccc
Q psy4758         153 YLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV-GLSFVGDNLVGAITCLTLAIAINAGTYTGFLSN  231 (318)
Q Consensus       153 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (318)
                      .++.+++.++.|++.||+++|+.+          ..+..+..+... ......+........+..+.+. ....+.....
T Consensus       284 ~~~~~~g~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  352 (405)
T TIGR00891       284 NIGAIVGGCVFGFLGDWLGRRKAY----------VCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLV-QGIWGILPKH  352 (405)
T ss_pred             HHHHHHHHHHHHHHHHHhCchhhh----------HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-ccchhhHHHH
Confidence            999999999999999999999876          333333322222 2222222221222223333222 2233444455


Q ss_pred             ccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758         232 HLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI  281 (318)
Q Consensus       232 ~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  281 (318)
                      ..+..|++ |++++|+.+...++++.++|.+.|.+.|..+   .|...+..
T Consensus       353 ~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g---~~~~~~~~  400 (405)
T TIGR00891       353 LGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD---EYGTALAS  400 (405)
T ss_pred             HhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc---ccchhHHh
Confidence            56666665 9999999999999999999999999999842   26555543

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.90  E-value=2.6e-23  Score=175.23  Aligned_cols=236  Identities=21%  Similarity=0.317  Sum_probs=168.3

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++.+.+.++|.+++|.+++.+.+. .+||+.|++.+++.++..++...++++++++++..++++++.
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~  189 (352)
T PF07690_consen  111 ADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY-FGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESES  189 (352)
T ss_dssp             HHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-CHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT-
T ss_pred             cccchhhhhhhccccccchhhhhhhcccchhhhhhhc-cccccccccccchhhhhhhhHhhhhhhccccccccccccccc
Confidence            5899999999999999999999999999999999977 899999999999998876655566666554433322222100


Q ss_pred             hhhccCccccccccCCc-chhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcce-eechhhhchHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKV-PWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFD-IKSNGFLSAAPYLAQWIL  159 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~-~~~~~~~~~~~~~~~~~~  159 (318)
                               + .+.+.. .++.++++|.+|......+...........+.|.|+++.+|++ ..+.+.......+...++
T Consensus       190 ---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (352)
T PF07690_consen  190 ---------K-KPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIG  259 (352)
T ss_dssp             -----------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHH
T ss_pred             ---------c-cccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence                     0 011222 3677888888875666666666678889999999988889999 789998999999999999


Q ss_pred             HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC---chhHHHHHHHHHHHHHhhhccccccccccccC
Q psy4758         160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG---DNLVGAITCLTLAIAINAGTYTGFLSNHLDLS  236 (318)
Q Consensus       160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (318)
                      .++.|++.||+++++..          ........+....+....   +........++.+. ..+...+.......+..
T Consensus       260 ~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~  328 (352)
T PF07690_consen  260 SLLAGRLSDRFGRRRRL----------LIAILLLILGALGLLLLPFSSSPVWLIIALFLIGF-GFGIVFPILFSLIQELV  328 (352)
T ss_dssp             HHHHHHHHHHTTCHHHH----------HHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHH-HHHHHCHHHHHHHHCCC
T ss_pred             HHHHHHHHHHcCcHHHH----------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC
Confidence            99999999999987644          223333333333332222   22223334444455 34445666666777777


Q ss_pred             ccc-hhhHHHHHHHHHHHHHhHhh
Q psy4758         237 PNF-AGTLMGFTNGCANIASILGP  259 (318)
Q Consensus       237 ~~~-~~~~~g~~~~~~~~g~~~~~  259 (318)
                      |++ +|++.|+.+...++++.++|
T Consensus       329 ~~~~~g~~~g~~~~~~~~~~~igP  352 (352)
T PF07690_consen  329 PPEYRGTAFGLFNSIGSLGGIIGP  352 (352)
T ss_dssp             HTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCC
Confidence            655 99999999999999999987

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK12382 putative transporter; Provisional

Probab=99.90  E-value=1e-21  Score=167.96  Aligned_cols=250  Identities=14%  Similarity=0.169  Sum_probs=165.4

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+|+|++++++.+.+...|.+++|++++.+.+. .|||+.+.+..+..++.    +.+.++.|+.+++.  ++   
T Consensus       138 ~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~---  207 (392)
T PRK12382        138 LGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH-FGFAALALTTMVLPLLA----WAFNGTVRKVPAHA--GE---  207 (392)
T ss_pred             HhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHHHHHH----HHHHHhccCCCCCc--cc---
Confidence            4788999999999999999999999999999999887 89999877655443332    11222222211100  00   


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  +   .+.++.++  .++...+..++..........+.|.|+++ .|++  +.+.......++.+++.+
T Consensus       208 ------------~---~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~  267 (392)
T PRK12382        208 ------------R---PSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRV  267 (392)
T ss_pred             ------------C---chHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHH
Confidence                        0   01222221  12222222233344555667788888877 5654  345556667777889999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccC-ccch
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLS-PNFA  240 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  240 (318)
                      +.|++.||+++|+.+          ..+..+..++...+...++.........+.+.+... ..+.......+.. +++|
T Consensus       268 ~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~  336 (392)
T PRK12382        268 LFGWMPDRFGGVKVA----------IVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSL-IFPALGVEVVKRVPSQVR  336 (392)
T ss_pred             HHHHHHHhcCCCeeh----------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHhcCHHHH
Confidence            999999999999876          555566666665555554433233333333433332 3333333334444 4559


Q ss_pred             hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      |++.|+.+...++|..++|.+.|.+.|.    .+|+..|.+.+++.+++.+.....
T Consensus       337 g~~~g~~~~~~~~g~~ig~~~~g~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~  388 (392)
T PRK12382        337 GTALGGYAAFQDIAYGVSGPLAGMLATS----FGYPSVFLAGAISAVLGIIVTILS  388 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCchHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999998    689999999888888777766544

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.90  E-value=1.7e-22  Score=178.16  Aligned_cols=271  Identities=14%  Similarity=0.128  Sum_probs=158.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHh-h
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER-I   80 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   80 (318)
                      .|++|+++|++++++...+..+|..+++.+++.+.+. .+||+.|++..+.. +..++....+||+++.++..++++. +
T Consensus       134 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~w~~~f~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~  211 (496)
T PRK03893        134 IESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV-WGWRALFFIGILPI-IFALWLRKNLPEAEDWKEKHAGKAPVR  211 (496)
T ss_pred             HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCHHHHHHHHHHHH-HHHHHHHHhCCCchhhhhhccccccch
Confidence            5789999999999999999999999999999999988 99999998754433 3223333444554321110000000 0


Q ss_pred             hhhhccCccccccccCCc------chhhhh-------------------------------cchhHHHHHHHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKV------PWKAIL-------------------------------TSLPVWAVLITHLCQNWGY  123 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~------~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~  123 (318)
                      ...+.....+++......      .....+                               +.+.........+......
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (496)
T PRK03893        212 TMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYS  291 (496)
T ss_pred             hHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhcc
Confidence            000000000000000000      000000                               0000001111111111111


Q ss_pred             HHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy4758         124 WTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV  203 (318)
Q Consensus       124 ~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~  203 (318)
                      +....++|.|+++.+|+++.+++.+.+...++.+++.++.|+++||+++|+.+          ..+..+..+..+.....
T Consensus       292 ~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~  361 (496)
T PRK03893        292 WPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY----------VCSLLISQLLIIPVFAI  361 (496)
T ss_pred             chHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHhhc
Confidence            23557899999877999999999999999999999999999999999999865          33444444433333322


Q ss_pred             CchhH-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758         204 GDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI  281 (318)
Q Consensus       204 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  281 (318)
                      .+... ..........+......+.......+..|++ |++++|+.+...++|+.++|.+.|.+.|.    .+|...+..
T Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~----~g~~~~~~~  437 (496)
T PRK03893        362 GGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR----LDLGTALAS  437 (496)
T ss_pred             cccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc----CChHHHHHH
Confidence            22222 2212222111222223344445566666665 99999999999999999999999999998    567777655


Q ss_pred             HHHHHHH
Q psy4758         282 AAAIFFF  288 (318)
Q Consensus       282 ~~~~~~~  288 (318)
                      .+.+..+
T Consensus       438 ~~~~~~~  444 (496)
T PRK03893        438 LSFSLTF  444 (496)
T ss_pred             HHHHHHH
Confidence            5444333

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.90  E-value=9.5e-22  Score=168.03  Aligned_cols=255  Identities=12%  Similarity=0.098  Sum_probs=173.6

Q ss_pred             ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhh
Q psy4758           3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYI   82 (318)
Q Consensus         3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (318)
                      |+.++++++...+....+..+|.++|+...+++.+. .|||.+|++.+++.++..+..++..|+++++++.    +    
T Consensus       124 ~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~-~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~----~----  194 (390)
T TIGR02718       124 EHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK-FGQRPAFLLVACVPLASLVCVLWLKDRAVASPEA----P----  194 (390)
T ss_pred             HhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHcCCCCcCcccc----c----
Confidence            455666777788888888899999999888888888 8999999999988877655544443332211110    0    


Q ss_pred             hhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH-HHHHHHH
Q psy4758          83 ETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL-AQWILIL  161 (318)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~  161 (318)
                                 +.+..++++++|+|.++......++...+......+.+.|++| .|+++++.|.+...... ..+++.+
T Consensus       195 -----------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~  262 (390)
T TIGR02718       195 -----------LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCG  262 (390)
T ss_pred             -----------hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHH
Confidence                       1111346788999998888888888888888888899999988 79999999998887764 6677889


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHH-HHHHHhc----CchhHHHHHHHHHHHHHhhhcccccccc-cccc
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAA-LVGLSFV----GDNLVGAITCLTLAIAINAGTYTGFLSN-HLDL  235 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  235 (318)
                      +.|++.||+++|+.+          ..+..+.++. .......    ............+.....+...+..... ....
T Consensus       263 ~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  332 (390)
T TIGR02718       263 GGAWLVRRAGLWRTF----------ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFA  332 (390)
T ss_pred             HHHHHHHHhhHHHHH----------HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999865          3333322111 1111111    1111121222222222222222333333 3334


Q ss_pred             Cc-cchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHH
Q psy4758         236 SP-NFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLI  292 (318)
Q Consensus       236 ~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (318)
                      .+ +++++.+++.+...++|..++|.+.|.+.|.    .+|+..|...+++.+++.+.
T Consensus       333 ~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~----~G~~~~f~~~~~~~l~a~~~  386 (390)
T TIGR02718       333 GDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR----FGYAGGFLSGTVLAVLAILL  386 (390)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HccHHHHHHHHHHHHHHHHH
Confidence            44 4599999999999999999999999999998    67888888877766665443

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.89  E-value=8.3e-22  Score=169.16  Aligned_cols=243  Identities=7%  Similarity=-0.031  Sum_probs=162.9

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+++|++++++...+..+|..++|.+++.+.+. .|||+.|++.+++.++..+..++.+||+++++++..+ .   
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~-~---  204 (413)
T PRK15403        130 QEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-VHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFS-A---  204 (413)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCC-h---
Confidence            5789999999999999999999999999999999887 8999999999988887766656667876532211000 0   


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  +....++++++|||.++...+..++.....+.+..+.|.++++.+|+++.+.++.......+..+++.
T Consensus       205 ------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~  272 (413)
T PRK15403        205 ------------KSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANA  272 (413)
T ss_pred             ------------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        11123567889999999988888888888888888999999998899999999988888888888888


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccch
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNFA  240 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (318)
                      +.+++.++..+++.....   .....++..+..++..   ...+... ......+.+.+..... +........-.+..+
T Consensus       273 l~~~~~~~~~~~~~~~~~---~~~~~ig~~l~~~~~~---~~~~~~~~~~~~~~l~~~G~~~~~-p~~~~~al~~~~~~~  345 (413)
T PRK15403        273 IVARFVKDPTEPRFIWRA---VPIQLVGLALLIVGNL---LWPHVWLWSVLGTSLYAFGIGLIF-PTLFRFTLFSNNLPK  345 (413)
T ss_pred             HHHHHhccCCchhHHHHH---HHHHHHHHHHHHHHHH---HccccHHHHHHHHHHHHHHHHHHh-HHHHHHHhccCCCCC
Confidence            887766544443322100   0011112211111111   1222221 2223333333333322 222222212222238


Q ss_pred             hhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         241 GTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      |++.++.+.....+...++...+++.+.
T Consensus       346 G~a~a~~~~~~~~~~~~~~~~~g~~~~~  373 (413)
T PRK15403        346 GTVSASLNMVILMVMAVSVEIGRWLWFN  373 (413)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999999999999999999988766

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.89  E-value=2.1e-21  Score=165.33  Aligned_cols=250  Identities=10%  Similarity=0.031  Sum_probs=176.4

Q ss_pred             CCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhcc
Q psy4758           7 PMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSL   86 (318)
Q Consensus         7 ~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (318)
                      +++|+++++......++|.++||++++++.++ +|||..|++.++..++. .+..+..||.+++.+    ++++      
T Consensus       123 ~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~-~g~~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~------  190 (382)
T PRK11128        123 QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW-FGEQAILWILTAGVASM-LLGQLLRPTIMPQGE----SRQQ------  190 (382)
T ss_pred             HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH-cChhHHHHHHHHHHHHH-HHHHHccCCCCCccc----cccc------
Confidence            35788999999999999999999999999998 89999999877654443 333333444321110    0000      


Q ss_pred             CccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHh
Q psy4758          87 VHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWL  166 (318)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l  166 (318)
                          .  ++...++++++|+|.++...+..++..........+.|.|+++ .|.++.+.|.+.+...++.++..++.+++
T Consensus       191 ----~--~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l  263 (382)
T PRK11128        191 ----E--SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRL  263 (382)
T ss_pred             ----c--ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence                0  1123467899999999988888887777777788888999977 89999999999888888899999999999


Q ss_pred             HHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHH
Q psy4758         167 ADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGF  246 (318)
Q Consensus       167 ~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  246 (318)
                      .||+++|+.+          ..+.+..++....+...++.+......++.+.+... ..+....+..+..++++++..+.
T Consensus       264 ~~r~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  332 (382)
T PRK11128        264 FRRWSARDLL----------LLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTV-CHLAAMRYIAARPGSEVIRLQAL  332 (382)
T ss_pred             HHHCCHHHHH----------HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHhhhHHHHHH
Confidence            9999999865          556666666666666555444333334444444333 34444455556666668888888


Q ss_pred             HHHH-HHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHH
Q psy4758         247 TNGC-ANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNL  291 (318)
Q Consensus       247 ~~~~-~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (318)
                      .+.. ..+|..+||.++|.+.|.    .++ ..++..+++.+++++
T Consensus       333 ~~~~~~~~g~~ig~~i~G~l~~~----~g~-~~~~~~~~~~~~~~~  373 (382)
T PRK11128        333 YSALAMGGSIAIMTVLSGFLYQH----LGA-GVFWVMALVALPALF  373 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh----ccH-HHHHHHHHHHHHHHH
Confidence            8644 566778999999999998    444 355555555554433

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.88  E-value=1.3e-21  Score=166.99  Aligned_cols=267  Identities=11%  Similarity=0.005  Sum_probs=175.6

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      +.|++|+++|++++|+.+....+|.++||.+++++.+.  .|+..+.+.+...++. .+..+.+||+|+++++.+.++..
T Consensus       113 i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~  189 (393)
T PRK11195        113 LTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQSWNPIA  189 (393)
T ss_pred             HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccCCCHHH
Confidence            35899999999999999999999999999999999885  4888887766554433 44456677765432211111100


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (318)
                      ..           ++....++.++++|.+........+............|.|+++.+|.++.+.|.+.....++.++++
T Consensus       190 ~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~  258 (393)
T PRK11195        190 LL-----------RDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA  258 (393)
T ss_pred             HH-----------HHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Confidence            00           0111224567888877655555444455555666777888888899999999999999999999999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-  239 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (318)
                      +..+++.||.++++.+          ..+.. .++....+...++.+......++.+.+..... +......++..|++ 
T Consensus       259 ~~~~~l~~~~~~~~~~----------~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~-~~~~~~~q~~~~~~~  326 (393)
T PRK11195        259 GAAARLVTLETVLRVL----------PAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFV-VPMNALLQHRGHVLV  326 (393)
T ss_pred             HHHHHHhcCCcccchH----------HHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhh-hhHHHHHHhhCcccc
Confidence            9999999998877654          33332 22333333333322212233334444433333 33444455666664 


Q ss_pred             -hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         240 -AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       240 -~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                       +|++.++.+..++++..++..+.+.+ +.    .+.+..+++.+...+++..+...++.
T Consensus       327 ~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (393)
T PRK11195        327 GAGHSIAVQNFNENLAMLLMLGLYSLL-VK----LGVPVVAVIVGFGLLVALAMALLWRW  381 (393)
T ss_pred             cchhHHHHHhHHHHHHHHHHHHHHHHH-HH----cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence             69999999999999999999999865 44    45556666655555555555544443

>KOG2504|consensus

Probab=99.88  E-value=4.1e-22  Score=172.46  Aligned_cols=280  Identities=17%  Similarity=0.241  Sum_probs=206.6

Q ss_pred             ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC---------
Q psy4758           3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF---------   73 (318)
Q Consensus         3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   73 (318)
                      .|| +|+|+.+.|+..++.++|.++-|.+..++.+. .|||+.+++.+.+.+-.........|..++..+.         
T Consensus       162 ~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~-~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~  239 (509)
T KOG2504|consen  162 TYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK-YGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSA  239 (509)
T ss_pred             hHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcccc
Confidence            445 58999999999999999999999999999998 9999999999998877766666665533322111         


Q ss_pred             -----------CCh--hHhhhhh------hccCccccccc--cCCcc----hhhhhcchhHHHHHHHHHHHHHHHHHHHh
Q psy4758          74 -----------ISL--EERIYIE------TSLVHSSTVSS--SMKVP----WKAILTSLPVWAVLITHLCQNWGYWTLLT  128 (318)
Q Consensus        74 -----------~~~--~~~~~~~------~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (318)
                                 ...  ++.....      +..++.+++..  ..+..    ..+++++|.++.+.+...+...+++....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~  319 (509)
T KOG2504|consen  240 ASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFV  319 (509)
T ss_pred             ccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence                       000  0000000      00000000000  11111    25789999999999999999999999999


Q ss_pred             hhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH
Q psy4758         129 EMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV  208 (318)
Q Consensus       129 ~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (318)
                      ++|.|..+ .|++..++..+.+..++..+++.++.|+++|+...++..        ...++.+..+++.+..+...+...
T Consensus       320 ~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~--------~~~~~ll~~gl~~~~~p~~~~~~~  390 (509)
T KOG2504|consen  320 YLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALV--------LFLLTLLIAGLARLFLPFATTYVG  390 (509)
T ss_pred             HHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHH--------HHHHHHHHHHHHHHHHHHhccHHH
Confidence            99999996 999999999999999999999999999999998854432        236677777777777777776654


Q ss_pred             HHHHHHHHHHHHhhhccccccccccccCc-cchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHH
Q psy4758         209 GAITCLTLAIAINAGTYTGFLSNHLDLSP-NFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFF  287 (318)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  287 (318)
                      +...+.+++...+.. .........+..+ ++-..+.|+...++.++..+||++.|++.|.+   .+|...|+..+++.+
T Consensus       391 l~~~~~~fG~~~g~~-~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t---g~Y~~~f~~~g~~~~  466 (509)
T KOG2504|consen  391 LIVFSILFGFCVGSF-SSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT---GNYDHAFYFCGLCFL  466 (509)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc---CCeeeehhhcChHHH
Confidence            555555555544433 3333334445554 45999999999999999999999999999996   458999999999999


Q ss_pred             HHHHHHHhhc
Q psy4758         288 FGNLIFLIFG  297 (318)
Q Consensus       288 ~~~~~~~~~~  297 (318)
                      ++.+..+..+
T Consensus       467 ~s~~~~~~~~  476 (509)
T KOG2504|consen  467 LSAVLLLILR  476 (509)
T ss_pred             HHHHHHHHhH
Confidence            9887776665

>PRK10054 putative transporter; Provisional

Probab=99.88  E-value=9.4e-22  Score=167.91  Aligned_cols=256  Identities=14%  Similarity=0.111  Sum_probs=174.5

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      +|.+|+++|++++++.....++|.+++|.+++.+.+  .+||.+|++.++..++..++..+++||+++++++  +++   
T Consensus       122 ~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~--~~~---  194 (395)
T PRK10054        122 ADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIAT--ETG---  194 (395)
T ss_pred             HHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcHHHHHHHHHHHHHHHHHHHHhcccccccc--chh---
Confidence            467788899999999999999999999999999875  6899999998877777655555556654322110  000   


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--hcceeechhhhchHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV--LQFDIKSNGFLSAAPYLAQWIL  159 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~~~~~~~~~~~~~~~~~~~~  159 (318)
                                  +  ..+.++++|||+++...+..++..........+.+.|+.+.  .+.+....+.......+.....
T Consensus       195 ------------~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  260 (395)
T PRK10054        195 ------------S--VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSL  260 (395)
T ss_pred             ------------h--hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeee
Confidence                        0  01135678899998888777777777666666777777542  3555566677777766666777


Q ss_pred             HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCcc
Q psy4758         160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPN  238 (318)
Q Consensus       160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (318)
                      .+..|++.||.++|+.+          ..++.+..++...+....++.. +.+.....+.+.. ...+.......+..|+
T Consensus       261 ~~~~g~~~~~~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~p~~~~~~~~~~p~  329 (395)
T PRK10054        261 QYSVGRRLNAANIRPLM----------TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEI-IYAPGEYMLIDHIAPP  329 (395)
T ss_pred             hhHHHHHHccCCchhHH----------HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHhCCc
Confidence            78889999999888765          4555555666555544333332 3333333333332 2334445556566666


Q ss_pred             c-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         239 F-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       239 ~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      + ++++.+..+ ...+|..+||.++|.+.|+    .++...+.+.+.+..+..++..
T Consensus       330 ~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~----~g~~~~~~~~~~~~~~~~~~~~  381 (395)
T PRK10054        330 GMKASYFSAQS-LGWLGAAINPLVSGVILTT----LPPWSLFVILALAIVAAWLLML  381 (395)
T ss_pred             ccceehHhHHH-HHHHHHHHHHHHHHHHHHH----cChhhHHHHHHHHHHHHHHHHH
Confidence            5 999988754 6778999999999999999    6777777766655555444443

>TIGR00901 2A0125 AmpG-related permease

Probab=99.88  E-value=8e-22  Score=166.52  Aligned_cols=224  Identities=12%  Similarity=0.065  Sum_probs=156.7

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCC--------chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWG--------WPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF   73 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~g--------Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (318)
                      .|++|+|+|+++.++...+..+|.++++.+++.+.+. .+        ||..|++.++..++..+..++..||++++++.
T Consensus       109 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~-~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~  187 (356)
T TIGR00901       109 LEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP-EFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASV  187 (356)
T ss_pred             HHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-cccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCccccc
Confidence            5889999999999999999999999999999998877 67        99999999887776544444445664322111


Q ss_pred             CChhHhhhhhhccCccccccccCCcchhhhhcchh---HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhch
Q psy4758          74 ISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLP---VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSA  150 (318)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~  150 (318)
                       ++++.              ++.+.++++++++|.   ++...+..++.....+....+.|.|+++ +|+++.+.+....
T Consensus       188 -~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~  251 (356)
T TIGR00901       188 -PKPLT--------------QAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAK  251 (356)
T ss_pred             -chhHH--------------HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhH
Confidence             11110              111234667777775   7777777777788888889999999998 8999999988877


Q ss_pred             HHH-HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC----------chhHHHHHHHHHHHH
Q psy4758         151 APY-LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG----------DNLVGAITCLTLAIA  219 (318)
Q Consensus       151 ~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~  219 (318)
                      ..+ +..+++.+++|++.||+|+|+.+          ..+.++.++....+.+..          +..........+...
T Consensus       252 ~~~~~~~~~g~~~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  321 (356)
T TIGR00901       252 INGLLGAILGGLIGGIIMQPLNILYAL----------LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAV  321 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHH----------HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHH
Confidence            666 56889999999999999998865          444444444444333221          122222333333333


Q ss_pred             HhhhccccccccccccCccc-hhhHHHHHHHHHH
Q psy4758         220 INAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCAN  252 (318)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~  252 (318)
                      ..+...+.......+..|++ ||+.+|+.+...+
T Consensus       322 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       322 TGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             HhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence            33445566666666776666 9999999887765

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.88  E-value=1.4e-21  Score=187.96  Aligned_cols=259  Identities=13%  Similarity=0.043  Sum_probs=179.7

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      +.|++|+++|++++|+.+++.++|.++||++++++... .+|++.|+..++..+ .+++..+.+|++++..+....+...
T Consensus       133 l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  210 (1140)
T PRK06814        133 LPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS-GNFVILVALLMGIAV-LGWLASLFIPKTGNAAPDLKIDRNI  210 (1140)
T ss_pred             hHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHH-HHHHHHhhCCCCCCCCCCCeeccch
Confidence            45889999999999999999999999999999999998 899999944444444 3355556666654322211100000


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (318)
                       .           +.....++.+.++|.++...+..++..+....+..++|.|+++.+|.++.+.|++.+...++.+++.
T Consensus       211 -~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~  278 (1140)
T PRK06814        211 -I-----------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS  278 (1140)
T ss_pred             -H-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence             0           1111346778889999999888888888888888999999999899999999999999999999999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc--------------------CchhHHHHHHHHHHHHH
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV--------------------GDNLVGAITCLTLAIAI  220 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~  220 (318)
                      ++.|+++|+..+++.+          ..+.++.++..+.+.+.                    .+.+...+..++++.+.
T Consensus       279 ~~~g~l~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  348 (1140)
T PRK06814        279 FLASKLSEGRITLLYV----------PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAG  348 (1140)
T ss_pred             HHHHHHhCCceeeeee----------hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHH
Confidence            9999999887776654          22222222222222221                    22222333344444444


Q ss_pred             hhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHH
Q psy4758         221 NAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFF  287 (318)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  287 (318)
                      +.. .+...+..++..|++ +|+++|+.+...+++..+++.+.+.+.+..   .++...+++.+.+.+
T Consensus       349 ~~~-~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~---~~~~~~~~~~~~~~~  412 (1140)
T PRK06814        349 GLY-IVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALG---FSIPWIILFIALANL  412 (1140)
T ss_pred             HHh-HHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHH
Confidence            333 333455555555555 999999999999999999999999987542   455555555444433

>TIGR01272 gluP glucose/galactose transporter

Probab=99.88  E-value=3.3e-21  Score=158.54  Aligned_cols=250  Identities=12%  Similarity=0.043  Sum_probs=172.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC---------------CCchHHHHHHHHHHHHHHHHHHH-Hhc
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP---------------WGWPSIFYVSGAVAIVWAAAWCY-IGA   65 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~---------------~gWr~~f~~~~~~~~~~~~~~~~-~~~   65 (318)
                      ++..|+|++++.+++.+...++|..++|.+++.+....               ..||++|++.+.+.++..+...+ -+|
T Consensus        36 ~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p  115 (310)
T TIGR01272        36 SILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLP  115 (310)
T ss_pred             HHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            35568889999999999999999999999999877321               37999999777666555443322 223


Q ss_pred             CCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--hcceee
Q psy4758          66 NSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV--LQFDIK  143 (318)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~~~~  143 (318)
                      |.+++   .++++.              .++....++++++|.++...+..+++.....++..|.+.|+.+.  +|+++.
T Consensus       116 ~~~~~---~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~  178 (310)
T TIGR01272       116 ELQEA---DVARVS--------------SGDTTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPED  178 (310)
T ss_pred             CCCcc---cccccc--------------cccccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHH
Confidence            32111   000000              00001123567888899888888888888999999999999863  689999


Q ss_pred             chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhh
Q psy4758         144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAG  223 (318)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (318)
                      +.+...+....+.++|+++++++.||+++|+.+          ..+..+..+...+....++.. .......++.+ .+.
T Consensus       179 ~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l----------~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~-~s~  246 (310)
T TIGR01272       179 QAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL----------AFNAFLAVLLSIGAALTHGYV-AMWFVLALGLF-NSI  246 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHH-HHH
Confidence            999999999999999999999999999998865          444444444444444433322 22233334443 344


Q ss_pred             ccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHH
Q psy4758         224 TYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAI  285 (318)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~  285 (318)
                      ..+...+...+..|++.+++.++. ....+|+++.|.+.|.+.|.    .+.+.++++...+
T Consensus       247 i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~----~g~~~a~~v~~~~  303 (310)
T TIGR01272       247 MFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADC----LGIQLAFALPVPC  303 (310)
T ss_pred             HHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHh----ccchHHHHHHHHH
Confidence            555555555565666667777775 67889999999999999998    5667777644433

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.88  E-value=3.7e-21  Score=161.96  Aligned_cols=235  Identities=26%  Similarity=0.455  Sum_probs=191.5

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++|+|+|++.+++.+...++|..+++.+++.+.+. .+||+.|++.+++.++..+...+. +                
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~----------------  174 (352)
T cd06174         113 AEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES-LGWRWLFLILAILGLLLALLLLFL-L----------------  174 (352)
T ss_pred             HHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHH-H----------------
Confidence            5889999999999999999999999999999999987 889999999888877765554332 2                


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                               |.++...+..++..........+.|.+.++..|.+..+.+.......++..++.+
T Consensus       175 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  229 (352)
T cd06174         175 -------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGAL  229 (352)
T ss_pred             -------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence                                     4566777788888888899999999999987799999999999999999999999


Q ss_pred             HHHHhHHHHhhhc-CcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-
Q psy4758         162 VFSWLADYIVAKQ-ILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-  239 (318)
Q Consensus       162 ~~g~l~dr~g~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (318)
                      +.+++.||+++|+ .+          ..+..+..++.......++...........+.+. ....+.......+..|++ 
T Consensus       230 ~~~~~~~~~~~~~~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~  298 (352)
T cd06174         230 LGGLLSDRLGRRRLLL----------LIGLLLAALGLLLLALAPSLALLLVALLLLGFGL-GFAFPALLTLASELAPPEA  298 (352)
T ss_pred             HHHHHHHHHHhhhHHH----------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH-hccchhHHHHHHhhcCHHH
Confidence            9999999999998 65          5677777777777766655443334444444443 344556666666777755 


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      |++.+|+.+...+++..++|.+.+.+.|.    .+|+..+.+.+++.+++.+...
T Consensus       299 ~~~~~~~~~~~~~~~~~i~~~i~g~l~~~----~~~~~~~~~~~~~~~i~~i~~~  349 (352)
T cd06174         299 RGTASGLFNTFGSLGGALGPLLAGLLLDT----GGYGGVFLILAALALLAALLLL  349 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCcchHHHHHHHHHHHHHHHhe
Confidence            99999999999999999999999999987    6888899988888887776654

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00895 2A0115 benzoate transport

Probab=99.88  E-value=1.3e-21  Score=167.60  Aligned_cols=251  Identities=20%  Similarity=0.255  Sum_probs=165.4

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      +|++|+++|++++++...+..+|..+++.+++.+.+. .|||+.|++.+++.++..++...++||+++.....++++...
T Consensus       131 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (398)
T TIGR00895       131 SEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV-FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRR  209 (398)
T ss_pred             HHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHH
Confidence            5789999999999999999999999999999999988 899999999887777776777777888764221111111110


Q ss_pred             h----hhccCcc-------cccc-ccCCcchhhhhcc---hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechh
Q psy4758          82 I----ETSLVHS-------STVS-SSMKVPWKAILTS---LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNG  146 (318)
Q Consensus        82 ~----~~~~~~~-------~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~  146 (318)
                      .    .....++       ++.. +..+...+.++++   +..+...+..++.....+....+.|.+.++ .|+++.+.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~  288 (398)
T TIGR00895       210 IVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAA  288 (398)
T ss_pred             HHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHH
Confidence            0    0000000       0000 0111112223332   344555555666667777788888955554 899999999


Q ss_pred             hhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccc
Q psy4758         147 FLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYT  226 (318)
Q Consensus       147 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (318)
                      .......++.+++.++.|++.||+++|+..          ............+.....+........+..+.+... ..+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~  357 (398)
T TIGR00895       289 TGGALFNFGGVIGSIIFGWLADRLGPRVTA----------LLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNG-GQS  357 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchHHHH----------HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH-HHH
Confidence            999999999999999999999999988432          222222222222222233333233334444444333 344


Q ss_pred             cccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         227 GFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       227 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      .......+..|++ |+++.|+.+...++|..++|.+.|++
T Consensus       358 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l  397 (398)
T TIGR00895       358 GLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL  397 (398)
T ss_pred             HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence            5556666777666 99999999999999999999999876

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.88  E-value=1.2e-21  Score=170.05  Aligned_cols=241  Identities=18%  Similarity=0.180  Sum_probs=164.1

Q ss_pred             CccC-CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy4758           2 SKWA-PPMERARLFSFAFSGTQFGNLVTLPVAGLLAG------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI   74 (318)
Q Consensus         2 ~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (318)
                      .|.. +++||++..++.+.+..+|..+++.+.+.+..      ...+||+.+.+.++++++..++.++..||++++.+..
T Consensus       125 ~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~  204 (437)
T TIGR00792       125 PAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN  204 (437)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc
Confidence            3555 56899999999999999988887766555442      1268999999999988887777777777765321110


Q ss_pred             ChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH
Q psy4758          75 SLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL  154 (318)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~  154 (318)
                        +++           +  .+....++++++||.++...+..++.....+....+.+.|.++..+ ++.+.+.+.....+
T Consensus       205 --~~~-----------~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i  268 (437)
T TIGR00792       205 --IEK-----------K--LSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIV  268 (437)
T ss_pred             --ccc-----------C--CCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHH
Confidence              000           0  1122346778899999988888888877777776677777766555 45566677777788


Q ss_pred             HHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhcccccccccc
Q psy4758         155 AQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHL  233 (318)
Q Consensus       155 ~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  233 (318)
                      +.+++.++.++++||+|+|+.+          ..+..+..++...+.+.+++.. .....++.+.+... ..+...+...
T Consensus       269 ~~ii~~~~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~  337 (437)
T TIGR00792       269 AGLIGVLLFPRLVKKFGRKILF----------AGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNF-VTGLVWALVA  337 (437)
T ss_pred             HHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence            9999999999999999999866          4555555555555554433322 22222333333222 2333344443


Q ss_pred             ccC--------ccchhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         234 DLS--------PNFAGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       234 ~~~--------~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      |..        ++++|++.|+.+....+|..+++.+.|.+.+..
T Consensus       338 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~  381 (437)
T TIGR00792       338 DTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII  381 (437)
T ss_pred             hhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            432        234899999999999999999999999998764

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.88  E-value=6.3e-21  Score=162.44  Aligned_cols=248  Identities=15%  Similarity=0.073  Sum_probs=162.3

Q ss_pred             ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhh
Q psy4758           3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYI   82 (318)
Q Consensus         3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (318)
                      |..++++|+++++..+.+.++|..+|+.+++.+.+. ..|+..+ ..+........+  .+.+.++++++          
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~----------  186 (381)
T PRK03633        121 CSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE-LMSVLPW-VTGLVLAAILPL--LFTRILNQQAE----------  186 (381)
T ss_pred             HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-ccchHHH-HHHHHHHHHHHH--HHhcccCCCCC----------
Confidence            567888999999999999999999999999998775 4343333 323222221111  12222221100          


Q ss_pred             hhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHH
Q psy4758          83 ETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILV  162 (318)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  162 (318)
                                 +++..+.++.+++|.++......+.....+.....++|.|+++ .|.++.+.+.+.+...++.+++++.
T Consensus       187 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~  254 (381)
T PRK03633        187 -----------NHDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWP  254 (381)
T ss_pred             -----------CCCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence                       0011235567888887765554555555566677889999987 7999999999888888999999999


Q ss_pred             HHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chh
Q psy4758         163 FSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAG  241 (318)
Q Consensus       163 ~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  241 (318)
                      .|++.||+++|+.+          ..+..+..++.....  .... ......+.+.+.. ...+.......+..|+ +++
T Consensus       255 ~g~l~dr~~~~~~l----------~~~~~~~~~~~~~~~--~~~~-~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~  320 (381)
T PRK03633        255 IGRLADRFGRLLVL----------RVQVFVVILGSIAML--SQAA-MAPALFILGAAGF-TLYPVAMAWACEKVEHHELV  320 (381)
T ss_pred             hHHHHHHcCcHHHH----------HHHHHHHHHHHHHHh--hhHH-HHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHH
Confidence            99999999999865          334444444333322  1111 2222233333322 2334444444454544 577


Q ss_pred             hHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       242 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      .+.+..+...++|+.++|.+.|++.|+    .++...|.+.+.+.++..+..+
T Consensus       321 ~~~~~~~~~~~lG~~igp~~~G~l~~~----~g~~~~f~~~~~~~l~~~~~~~  369 (381)
T PRK03633        321 AMNQALLLSYTVGSLLGPSFTAMLMQN----YSDNLLFIMIASVSFIYLLMLL  369 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH----hCccHHHHHHHHHHHHHHHHHH
Confidence            788888888999999999999999998    5678888887777665544443

>TIGR00889 2A0110 nucleoside transporter

Probab=99.88  E-value=9.4e-21  Score=162.72  Aligned_cols=257  Identities=11%  Similarity=0.136  Sum_probs=170.1

Q ss_pred             CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccCc
Q psy4758           9 ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLVH   88 (318)
Q Consensus         9 ~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (318)
                      .|.+.+|      .+|.+++|.+++.+... ..|+ +|++.+++.++..+ ..+.+||+|+.+++.+.+.+         
T Consensus       133 ~~~r~~G------~lG~~ig~~l~g~l~~~-~~~~-~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~---------  194 (418)
T TIGR00889       133 PPIRVMG------TIGFIAAMWAVSLLDIE-LSNI-QLYITAGSSALLGV-FALTLPDIPVAKSTAKMSIK---------  194 (418)
T ss_pred             CCeeeeh------hHHHHHHHHHHHHhccc-chhH-HHHHHHHHHHHHHH-HHhcCCCCCCCccccccCHH---------
Confidence            4555555      46888888888887433 4565 45566666665544 35567776532211100000         


Q ss_pred             cccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccee--------echhhhchHHHHHHHHHH
Q psy4758          89 SSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDI--------KSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~--------~~~~~~~~~~~~~~~~~~  160 (318)
                           +..+.+.++++|+|+++.+.+..++..........+.|.++++ .|.++        ...+...+...+..+++.
T Consensus       195 -----~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~  268 (418)
T TIGR00889       195 -----VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFI  268 (418)
T ss_pred             -----HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence                 1111234578899998888888777766666677888888877 56554        556888888888999999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchh---H-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNL---V-GAITCLTLAIAINAGTYTGFLSNHLDLS  236 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (318)
                      +..|+++||+|+|+.+          ..+.++.++....+....+..   . ..+..++.+.+.. ...+....+..+..
T Consensus       269 ~~~g~l~dr~g~r~~l----------~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~-~~~~~~~~~i~~~~  337 (418)
T TIGR00889       269 LTIPFFLKRFGIKKVM----------LLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFD-FFNISGSVFVEKEV  337 (418)
T ss_pred             HHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHC
Confidence            9999999999999876          566666666655555433211   1 2222333333332 33344455566667


Q ss_pred             ccc-hhhHHHHHH-HHHHHHHhHhhhhhheeeccCCCc--cchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         237 PNF-AGTLMGFTN-GCANIASILGPLFVGFIVTDNTSV--SQWQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       237 ~~~-~~~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      |++ |+++.|+.+ ....+|..+||.+.|++.|..++.  .+|+..|.+.+++.+++.++..++.+++
T Consensus       338 p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~  405 (418)
T TIGR00889       338 PVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS  405 (418)
T ss_pred             CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            766 999999997 567899999999999999985421  2689999888888777777666665543

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.88  E-value=1.8e-21  Score=165.04  Aligned_cols=238  Identities=12%  Similarity=0.118  Sum_probs=158.1

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC---------CCCchHHH-HHHHHHHHHHHHHHHHHhcCCCCCC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS---------PWGWPSIF-YVSGAVAIVWAAAWCYIGANSPAQH   71 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~---------~~gWr~~f-~~~~~~~~~~~~~~~~~~~~~~~~~   71 (318)
                      +|++|+++|++++++.....++|..+++.+++.+...         ..+||+.| +..+++..+..++.+...+|.|+++
T Consensus       116 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (366)
T TIGR00886       116 SFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK  195 (366)
T ss_pred             HHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCccc
Confidence            6889999999999999988888888887777665531         15899999 4446665555555666667665432


Q ss_pred             CCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchH
Q psy4758          72 PFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAA  151 (318)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~  151 (318)
                      ++.+  +.+. .+... ..+  ++.....++.+++|+++...+..++.....+....+.|.|+++.+|+++.+++.+...
T Consensus       196 ~~~~--~~~~-~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  269 (366)
T TIGR00886       196 PATG--KLSF-KGARW-SVG--TGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASL  269 (366)
T ss_pred             ccch--hccc-ccccc-ccc--chhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence            2111  0000 00000 000  1111245678889999888888887777788889999999998889999999998888


Q ss_pred             HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc---hhHHHHHHHHHHHHHhhhccccc
Q psy4758         152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD---NLVGAITCLTLAIAINAGTYTGF  228 (318)
Q Consensus       152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  228 (318)
                      ..+.++++.+++|++.||+++|+..          ..+......+..++.....   ................+......
T Consensus       270 ~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  339 (366)
T TIGR00886       270 GGLLGSLARPLGGAISDRLGGARKL----------LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGST  339 (366)
T ss_pred             HHHHHHHHhhccchHHHhhccchhH----------HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchh
Confidence            8999999999999999999998755          3333333333333332222   22222222223333333344555


Q ss_pred             cccccccCccchhhHHHHHHHHHHHHH
Q psy4758         229 LSNHLDLSPNFAGTLMGFTNGCANIAS  255 (318)
Q Consensus       229 ~~~~~~~~~~~~~~~~g~~~~~~~~g~  255 (318)
                      .....+..|+++|+++|+.+..+++|+
T Consensus       340 ~~~~~~~~~~~~g~~~g~~~~~~~~g~  366 (366)
T TIGR00886       340 FALVPHIFRRATGAVSGLVGAIGNLGG  366 (366)
T ss_pred             hhcchhhchhhcccHHHHHHHhccCCC
Confidence            566677888889999999999888763

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.87  E-value=4.6e-20  Score=157.97  Aligned_cols=237  Identities=12%  Similarity=0.062  Sum_probs=166.1

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|++++++|++++++.+.+..+|..++|.+++.+.+. .|||+.|++.++..++..++..++.||+++++++.       
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  193 (394)
T PRK11652        122 RDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL-FGWRACYLFLLLLGAGVTFSMARWMPETRPADARR-------  193 (394)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHHHHHHHHHHHHhCCccCccccch-------
Confidence            4678889999999999999999999999999999887 89999999988877776566666677754322110       


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  ++...++++++++|.++...+..+........+..+.|.++++.+|+++.+.++......++.+++..
T Consensus       194 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~  261 (394)
T PRK11652        194 ------------TRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAW  261 (394)
T ss_pred             ------------hHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        01123466788888888766666666666666677788899888899999999888888888888999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc-CchhH-HHHHHHHHHHHHhhhccccccccccccCccc
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV-GDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF  239 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (318)
                      +.+++.||.+++...         .........+........ ..... ........+.+. +...+.......+..|++
T Consensus       262 ~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~  331 (394)
T PRK11652        262 FAGRPNKRFSTLMWQ---------SVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA-GMLFPLATSGAMEPFPYL  331 (394)
T ss_pred             HHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcccc
Confidence            999999998843311         112222222222222221 11222 222233333333 334455555566777888


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      ++++.++.+...++|+.+++.+.+.+.+.
T Consensus       332 ~g~~~~~~~~~~~lg~~~~~~~~~~~~~~  360 (394)
T PRK11652        332 AGTAGALLGGLQNIGSGLAALLSAMLPQT  360 (394)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            99999999999999999999999988665

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.87  E-value=1.2e-20  Score=150.57  Aligned_cols=260  Identities=18%  Similarity=0.209  Sum_probs=193.9

Q ss_pred             ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhh
Q psy4758           3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYI   82 (318)
Q Consensus         3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (318)
                      +.|| |+-+..+|++.+..++|..+++.+.-.+.++..|||....+-+.++++..+..   +|...+++ ..+.      
T Consensus       126 ~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~W---lPq~~r~~-~~~~------  194 (395)
T COG2807         126 RDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIW---LPQALREQ-AASI------  194 (395)
T ss_pred             hhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHH---hhhccccc-cccc------
Confidence            4565 67899999999999999999999999999873489999999998888764433   23321111 0000      


Q ss_pred             hhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHH
Q psy4758          83 ETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILV  162 (318)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  162 (318)
                                 +.+..+-..++|||..|.+.+...++.+.+|+...|+|.++.| .|+|+.++|.+.+...+.++..++.
T Consensus       195 -----------~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll  262 (395)
T COG2807         195 -----------ATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALL  262 (395)
T ss_pred             -----------ccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHH
Confidence                       2222333468999999999999999999999999999999999 8999999999999999999999999


Q ss_pred             HHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccc-cCccchh
Q psy4758         163 FSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLD-LSPNFAG  241 (318)
Q Consensus       163 ~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  241 (318)
                      ...+.+|...++.+         ......+..++...+.+.+.+..+.- .++++.+.++..+......... ..|++.+
T Consensus       263 ~P~la~R~~n~r~~---------~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa  332 (395)
T COG2807         263 IPLLARRSKNQRPL---------VVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAA  332 (395)
T ss_pred             HHHHHHHhcccchH---------HHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHH
Confidence            99999997766654         24455555666666666665543222 3555555444444333333333 3344588


Q ss_pred             hHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         242 TLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       242 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      .-.|+.+.++++-.+.||.+.|++.|.+   .+|...+...+.+.++..+.-+...|
T Consensus       333 ~LSgmaQg~GYllAa~GP~l~G~lhDa~---gsw~~~~~~l~~~~i~m~i~Gl~a~r  386 (395)
T COG2807         333 ALSGMAQGVGYLLAAFGPWLFGFLHDAT---GSWSAPLVLLALATLLMLIFGLRAGR  386 (395)
T ss_pred             HHHHHhhhhhHHHHhhhhhhHhHHHHhc---CChHHHHHHHHHHHHHHHHHHhhcch
Confidence            8999999999999999999999999997   68888888777776666655554443

>TIGR00896 CynX cyanate transporter

Probab=99.87  E-value=6.4e-21  Score=160.91  Aligned_cols=236  Identities=17%  Similarity=0.099  Sum_probs=161.6

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPW-GWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      .|++| ++|++++++.+.+.++|..+++.+++.+.+... +||+.|.+.++..++.   ...++|+.+++++.    ++ 
T Consensus       113 ~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~---~~~~~~~~~~~~~~----~~-  183 (355)
T TIGR00896       113 KRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA---LLAWIPQVRRRVAA----NQ-  183 (355)
T ss_pred             HHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH---HHHHhhhhccccCC----CC-
Confidence            46675 689999999999999999999999988876522 3999998877654432   22234443321110    00 


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (318)
                                   +..+...++++|+|.++...+..++....++....|+|.|+++ .|+++.+.+...+...++.++++
T Consensus       184 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~  249 (355)
T TIGR00896       184 -------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASA  249 (355)
T ss_pred             -------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH
Confidence                         1111235577889998887777777777888888999999987 79999999999999999999999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-c
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-F  239 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  239 (318)
                      ++.|++.||+++|+..         ...+..+.+++...+.+.++.... ....+.+.+.+...+........+..++ +
T Consensus       250 ~~~g~l~dr~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~  319 (355)
T TIGR00896       250 LLIPALARRVKDQRGI---------VAVLAVLQLVGLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ  319 (355)
T ss_pred             HhHHHHHhhhccchHH---------HHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH
Confidence            9999999999654422         134455555555555544433322 2233344433332222222222333433 4


Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTDNT  270 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  270 (318)
                      ++...++.+...+++..++|.+.|++.|+.+
T Consensus       320 ~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g  350 (355)
T TIGR00896       320 AAALSAMAQSIGYLLAALGPLFVGVLHDISG  350 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8899999999999999999999999999853

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK10133 L-fucose transporter; Provisional

Probab=99.87  E-value=1.3e-20  Score=162.73  Aligned_cols=258  Identities=12%  Similarity=0.068  Sum_probs=169.1

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC-------------------------CCchHHHHHHHHHH-HH
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP-------------------------WGWPSIFYVSGAVA-IV   55 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~-------------------------~gWr~~f~~~~~~~-~~   55 (318)
                      +|+.|+++|++.+++.+....+|..+++.+++.+....                         .+||++|+....+. ++
T Consensus       143 ~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~  222 (438)
T PRK10133        143 TVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLV  222 (438)
T ss_pred             HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35666677777899999999999999999987654100                         25666675434333 33


Q ss_pred             HHHHHHHHhcCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhh-
Q psy4758          56 WAAAWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYI-  134 (318)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l-  134 (318)
                      ..++....+||.+++++  + +++.             .+...++++++++|.++...+..++......+...|.+.|+ 
T Consensus       223 ~~~~~~~~~p~~~~~~~--~-~~~~-------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~  286 (438)
T PRK10133        223 ALLIMLTKFPALQSDNH--S-DAKQ-------------GSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAV  286 (438)
T ss_pred             HHHHHHhcCCCCCcccc--c-cccc-------------cchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            22222222333221100  0 0000             11123456889999988877777777778787888999885 


Q ss_pred             hhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHH
Q psy4758         135 NSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCL  214 (318)
Q Consensus       135 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (318)
                      ++.+|+++.+++.......++.++++++++++.||+++|+.+          ..+..+..+.+.+....++.. ......
T Consensus       287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~  355 (438)
T PRK10133        287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL----------AAYALIAMALCLISAFAGGHV-GLIALT  355 (438)
T ss_pred             hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH----------HHHHHHHHHHHHHHHHcCChH-HHHHHH
Confidence            566899999999999999999999999999999999999865          344444444444443333322 222333


Q ss_pred             HHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccc-hHHHHHHHHHHHHHHHHH
Q psy4758         215 TLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQ-WQTIFLIAAAIFFFGNLI  292 (318)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~  292 (318)
                      ..+.+ .+...+.......+..|++.+++.++.. ...+|+.++|.+.|.+.|.    .+ .+..|++..++.+..+..
T Consensus       356 l~glg-~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~----~g~~~~~~~v~~~~~~~~~~~  428 (438)
T PRK10133        356 LCSAF-MSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDA----AGNIPTAELIPALCFAVIFIF  428 (438)
T ss_pred             HHHHH-HHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHHHh----ccchHHHHHHHHHHHHHHHHH
Confidence            34444 4445566666666667777788888875 4557889999999999887    44 677776655554444433

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.86  E-value=2e-20  Score=160.24  Aligned_cols=259  Identities=14%  Similarity=0.140  Sum_probs=174.6

Q ss_pred             CCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccC
Q psy4758           8 MERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLV   87 (318)
Q Consensus         8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (318)
                      +++++.+|......++|.+++|.+++.+.+  .+||.+|++.++++++..++.+...||+|++++.   ++.      .+
T Consensus       129 ~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~--~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~  197 (396)
T TIGR00882       129 RNSNFEYGKARMFGCVGWALCASIAGILFS--IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATV---ANA------LG  197 (396)
T ss_pred             hhcccccchhhhhcccHHHHHHHHHhhhhc--cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhh---hcc------cc
Confidence            344567788888889999999999998865  6999999999888887765555444443321110   000      00


Q ss_pred             ccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh---cceeechhhhchHHHHHHHHHHHHHH
Q psy4758          88 HSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVL---QFDIKSNGFLSAAPYLAQWILILVFS  164 (318)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g  164 (318)
                      ++++  +.+..+.++++|||.++...+..+.....+.....+.|.|+++.+   +.+....|...+...+...++.+..|
T Consensus       198 ~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g  275 (396)
T TIGR00882       198 ANAS--AFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAP  275 (396)
T ss_pred             cccC--CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            0000  222345778899999887777766666666666677888887754   45556678888888888899999999


Q ss_pred             HhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhH
Q psy4758         165 WLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTL  243 (318)
Q Consensus       165 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  243 (318)
                      ++.||+++|+.+          .++.++.++........++.+......+..+.+... .......+..+..+++ ++++
T Consensus       276 ~l~~r~g~~~~l----------~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~at~  344 (396)
T TIGR00882       276 LIINRIGAKNAL----------LIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPF-LLVGCFKYITSQFDVRLSATI  344 (396)
T ss_pred             HHHHHhccchhH----------HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCcceEEEe
Confidence            999999999876          556666666665555544443333333333332211 1122223334444444 7776


Q ss_pred             HHH-HHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         244 MGF-TNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       244 ~g~-~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      .+. .+....+|+.++|.+.|++.|.    .+|+.+|.+.+++.+++.+...
T Consensus       345 ~~~~~~~~~~lg~~~~~~l~G~l~~~----~G~~~~f~~~~~~~~i~~~~~~  392 (396)
T TIGR00882       345 YLIGFQFAKQLAMIFLSTLAGNMYDS----IGFQGAYLVLGCIVLLFTLISV  392 (396)
T ss_pred             ehHHHHHHHHHHHHHHHHhHHHHHHh----cccHHHHHHHHHHHHHHHHHHH
Confidence            666 5788999999999999999998    6889999998888777666543

>KOG0569|consensus

Probab=99.86  E-value=1.3e-20  Score=159.59  Aligned_cols=284  Identities=12%  Similarity=0.086  Sum_probs=194.2

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHH-HHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCC----CCCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAG-LLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQ----HPFIS   75 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~-~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~   75 (318)
                      +.|..|++.||......+.+..+|.+++..++. .+......|++.+.+..+++++. ++...++||+|+-    +++.+
T Consensus       141 l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~-l~~l~~~PESPk~Ll~~k~~~~  219 (485)
T KOG0569|consen  141 LTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ-LALLPFLPESPKYLLIKKGDEE  219 (485)
T ss_pred             HhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH-HHHHhcCCCCcchHHHHcCCHH
Confidence            468999999999999999999999999977664 34434378999999988888776 5667788999972    11111


Q ss_pred             hhHhhh--------------hhhccCccccccccCCcchhhhhcchhH-----HHHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy4758          76 LEERIY--------------IETSLVHSSTVSSSMKVPWKAILTSLPV-----WAVLITHLCQNWGYWTLLTEMPSYINS  136 (318)
Q Consensus        76 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~l~~  136 (318)
                      +.++..              ...+..++++..+.++.++++++++|+.     ..+.+....+..+.+....|...++++
T Consensus       220 ~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~  299 (485)
T KOG0569|consen  220 EARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT  299 (485)
T ss_pred             HHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH
Confidence            111100              0000000111112356778899987543     333444445566677788888888888


Q ss_pred             hhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh---cCc---hhH--
Q psy4758         137 VLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF---VGD---NLV--  208 (318)
Q Consensus       137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~---~~~--  208 (318)
                       .|+++.++-+.....+....+.++++.++.||.|||+++.          .+..++.+..+++..   ..+   .+.  
T Consensus       300 -aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~y  368 (485)
T KOG0569|consen  300 -AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLL----------ISLSLMAVALLLMSIALFLSNSFGSWLSY  368 (485)
T ss_pred             -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHH----------HHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence             8999999999999999999999999999999999999873          333333333322221   111   111  


Q ss_pred             -HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHH
Q psy4758         209 -GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIF  286 (318)
Q Consensus       209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~  286 (318)
                       .....+....++..+..+...-+..|++|++ |..+.++......+..++-......+.+..    |- ..|+.+.+.+
T Consensus       369 ~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~----g~-~~filF~i~~  443 (485)
T KOG0569|consen  369 LCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI----GP-YVFILFVIPL  443 (485)
T ss_pred             HHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cc-hhhHHHHHHH
Confidence             2233344445555566677777888999888 999999999999999999988888888874    22 4666666666


Q ss_pred             HHHHHHHHhhccccc
Q psy4758         287 FFGNLIFLIFGTSEV  301 (318)
Q Consensus       287 ~~~~~~~~~~~~~~~  301 (318)
                      ++..+..+...++++
T Consensus       444 ~~~~i~~~~~lPETk  458 (485)
T KOG0569|consen  444 AIFLIYLYRYLPETK  458 (485)
T ss_pred             HHHHHHHHHhCcccC
Confidence            666666555544444

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.86  E-value=4.2e-20  Score=178.33  Aligned_cols=264  Identities=14%  Similarity=0.068  Sum_probs=178.9

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC--------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS--------PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP   72 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (318)
                      ++|++|+++|++++|+.+.+.++|.++|+++++++.+.        ..+|++.+.+..+...+..++..+.+||.++...
T Consensus       128 i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (1146)
T PRK08633        128 IPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAP  207 (1146)
T ss_pred             hHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCc
Confidence            46899999999999999999999999999999998763        1345666555554444444555556677654322


Q ss_pred             CCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceee-chhhhchH
Q psy4758          73 FISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIK-SNGFLSAA  151 (318)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~-~~~~~~~~  151 (318)
                      ...+.+..          .........++.++++|.++...+..++..........++|.|+.+.+|++.. +.+++.+.
T Consensus       208 ~~~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~  277 (1146)
T PRK08633        208 EVFDKKKY----------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAA  277 (1146)
T ss_pred             cccccccc----------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHH
Confidence            11100000          00011123466778889888887777777777777888999999988999998 89999999


Q ss_pred             HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccc
Q psy4758         152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSN  231 (318)
Q Consensus       152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (318)
                      ..++.+++.++.|++.||+++++.+          .++.++.+++.+++....+.....+..++++.+.+. ..+....+
T Consensus       278 ~~ig~~~g~~~~g~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~  346 (1146)
T PRK08633        278 SAIGIGIGSLLAGRLSGRHIELGLV----------PLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGL-FIVPLNAL  346 (1146)
T ss_pred             HHHHHHHHHHHHHHHhCCceEccch----------hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-hhHHHHHH
Confidence            9999999999999999999988766          455555555555555544333233334444444333 33444555


Q ss_pred             ccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHH
Q psy4758         232 HLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFF  288 (318)
Q Consensus       232 ~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~  288 (318)
                      ..+..|++ ||+++|+.+.+.+++..+++.+.+.+... +  .++...+++.+.+.++
T Consensus       347 ~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~-~--~~~~~~~~~~~~~~~~  401 (1146)
T PRK08633        347 IQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGL-G--LSPAGLFYLIALVTLI  401 (1146)
T ss_pred             HhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh-c--cCHHHHHHHHHHHHHH
Confidence            55666655 99999999999999998887777665432 1  3444455554444333

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.85  E-value=4.7e-20  Score=160.48  Aligned_cols=264  Identities=17%  Similarity=0.188  Sum_probs=191.3

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      .|..|+++...++++.+...++..++||.++|.+... .|-.++|.+.++.-++. +......+..+++++  .++|.-.
T Consensus       129 p~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~-~G~~~~f~inalsfl~~-i~~l~~~~~~~~~~~--~~~e~~~  204 (524)
T PF05977_consen  129 PELVPKEDLPAANALNSISFNIARIIGPALGGILVAF-FGAAAAFLINALSFLIS-ILALLRWKPPPPPSS--LPRERFF  204 (524)
T ss_pred             HHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHHccccccccc--cchhhhh
Confidence            4678999999999999999999999999999999887 78888999887654443 333333332221111  1111100


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  +.-+..++-+.++|.+....+..++.+.....+...+|.+.++.+|.++...|++.+..+++.++|++
T Consensus       205 ------------~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal  272 (524)
T PF05977_consen  205 ------------SALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGAL  272 (524)
T ss_pred             ------------hhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence                        22234455566677776666656666666566677899999998999999999999999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-h
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-A  240 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  240 (318)
                      +.+++.+|+++++.+          ..+.++.+++++.+.+.++.+.....+++.|.+... ......+..++..|++ |
T Consensus       273 ~~~~l~~~~~~~~lv----------~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~-~~~~~~t~~Q~~~P~~~~  341 (524)
T PF05977_consen  273 LLPRLRRRLSSRRLV----------LLASLLFALALLLLALSPSFWLALIALFLAGAAWII-ANSSLNTLVQLSVPDWVR  341 (524)
T ss_pred             HHHHhhcccCcchhh----------HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHH
Confidence            999999999888765          556667777777777766555344444444444333 3444555566666666 9


Q ss_pred             hhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         241 GTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       241 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      |++++++.+..+.+..+|..+.|.+.|.    .+...++.+.++..+++.++....
T Consensus       342 GRv~si~~~~~~g~~~lGsll~G~la~~----~g~~~al~~a~~~lll~~~~~~~~  393 (524)
T PF05977_consen  342 GRVFSIYQMVFFGGMPLGSLLWGFLADH----FGVRTALLIAGAALLLSALIALRF  393 (524)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999998    677778877777666666655544

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.83  E-value=1.2e-18  Score=150.20  Aligned_cols=268  Identities=19%  Similarity=0.240  Sum_probs=192.8

Q ss_pred             hhHHHHHHhhHhhHHHhHHHHHHHHhCC-------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhh
Q psy4758          11 ARLFSFAFSGTQFGNLVTLPVAGLLAGS-------PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIE   83 (318)
Q Consensus        11 ~~~~~~~~~~~~~G~~~~~~~~~~l~~~-------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (318)
                      ++..+.-.....+|.++.-.+.-.+...       ..+-|..+.+.++.-++..+..++++||.|++++.....+.  ..
T Consensus       187 ~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~--~~  264 (477)
T PF11700_consen  187 GRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSY--LR  264 (477)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhH--HH
Confidence            8999999989999988888776665332       12358899999988888888889999998763221111110  00


Q ss_pred             hccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHH
Q psy4758          84 TSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVF  163 (318)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  163 (318)
                      ...       ++....++++.|+|+...+.+.++++.-+..++......|..+++|++..+...+.....+.+++|++++
T Consensus       265 ~g~-------~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~  337 (477)
T PF11700_consen  265 FGF-------KRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLF  337 (477)
T ss_pred             HHH-------HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            000       1222446677778999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHhhh--cCcchHHHHHHHHHHHHHHH-HHHHHHHH-h------cCchhHHHHHHHHHHHHHhhhcccccccccc
Q psy4758         164 SWLADYIVAK--QILSPTVSRKMWNTIGLWGS-AAALVGLS-F------VGDNLVGAITCLTLAIAINAGTYTGFLSNHL  233 (318)
Q Consensus       164 g~l~dr~g~~--~~~~~~~~r~~~~~~~~~~~-~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (318)
                      |++.||+|.|  +.+          ..+.++. .+.+..+. +      .++.+...+..+..+.+.+......-..+..
T Consensus       338 g~l~~r~g~k~~~~l----------~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~  407 (477)
T PF11700_consen  338 GWLQDRFGPKTKRTL----------LISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSR  407 (477)
T ss_pred             HHHHHHhCCchhHHH----------HHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            9999999999  544          2222222 11211111 0      2233335555555666655544444444444


Q ss_pred             ccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         234 DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       234 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      -.+|++.+..+|++.......+.+||.+.|.+.+.+   .+.+..+....++.+++.++......++
T Consensus       408 LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t---g~~r~g~~~l~~lf~~gl~ll~~v~~~~  471 (477)
T PF11700_consen  408 LIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT---GSQRYGFLFLLVLFLIGLILLFFVDVEK  471 (477)
T ss_pred             hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCchhHHHHHHHHHHHHHHHHhhccchh
Confidence            444455999999999999999999999999999997   3568888888888888887776655443

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.83  E-value=6.6e-19  Score=150.80  Aligned_cols=254  Identities=16%  Similarity=0.147  Sum_probs=168.4

Q ss_pred             ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC-------------------------CCchHHHHHHHHHHHHHH
Q psy4758           3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP-------------------------WGWPSIFYVSGAVAIVWA   57 (318)
Q Consensus         3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~-------------------------~gWr~~f~~~~~~~~~~~   57 (318)
                      +..|+++|++.+++.+...++|..++|.+++.+....                         .+||++|++.+++.++..
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~  200 (410)
T TIGR00885       121 VMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA  200 (410)
T ss_pred             HHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678889999999999999999999999998875320                         259999999888777654


Q ss_pred             HHHHHHhcCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy4758          58 AAWCYIGANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV  137 (318)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~  137 (318)
                      ++.. +.++ |+.++.  ++++              .....+.++++|+|+++...+..+++.....+..++++.|.++.
T Consensus       201 ~~~~-~~~~-p~~~~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~  262 (410)
T TIGR00885       201 LLIM-LTKM-PALNHS--DAKQ--------------ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRL  262 (410)
T ss_pred             HHHH-HhcC-CCCCcc--cccc--------------ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            4432 2222 221110  0000              11112455788999999888888888888878889999999762


Q ss_pred             h-cceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q psy4758         138 L-QFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTL  216 (318)
Q Consensus       138 ~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (318)
                      . +.+....+...+....+..+|+++++++.||+++|+.+          .+...+..+..++....++.. ....+...
T Consensus       263 ~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l----------~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~  331 (410)
T TIGR00885       263 IPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL----------MAYAIIGMALCLGSIFAGGHV-GLYCLTLC  331 (410)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH----------HHHHHHHHHHHHHHHHcCChH-HHHHHHHH
Confidence            2 33444445556666678899999999999999999865          555566666666665555433 33444444


Q ss_pred             HHHHhhhccccccccccccCccchhh-HHHHHHHHHHHHHhHhhhhhheeeccCC--CccchHHHHHHHHHHHHH
Q psy4758         217 AIAINAGTYTGFLSNHLDLSPNFAGT-LMGFTNGCANIASILGPLFVGFIVTDNT--SVSQWQTIFLIAAAIFFF  288 (318)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~g~~~~~~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~  288 (318)
                      +.+... .++.......+..+++..+ +.++...  -+|+++.|.+.|.+.|..+  ...+++..|++...+.+.
T Consensus       332 glf~s~-~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~  403 (410)
T TIGR00885       332 SAFMSL-MFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV  403 (410)
T ss_pred             HHHHHH-HHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence            444444 4466666666666666433 4444333  3999999999999999521  001467777765555444

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>KOG0253|consensus

Probab=99.82  E-value=1.6e-18  Score=138.41  Aligned_cols=279  Identities=14%  Similarity=0.118  Sum_probs=184.3

Q ss_pred             ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-ChhHhh-
Q psy4758           3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI-SLEERI-   80 (318)
Q Consensus         3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-   80 (318)
                      |.-|..+|..-+-.. ..+.+|.+....+......+ +||||.....+.+..+. ....+++||+|+-.-.. ++.+.- 
T Consensus       192 e~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~-~gwr~~l~~~~~pl~~~-a~f~~w~~ESpRf~~~~G~~~kAle  268 (528)
T KOG0253|consen  192 EFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN-FGWRYLLFTSSTPLMFA-ARFLVWVYESPRFYLAKGDDYKALE  268 (528)
T ss_pred             HhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHhHHHHH-HHHHhhcccCcchhhhcCChHHHHH
Confidence            456777888877777 89999999999999988888 99999988888555444 55677789998721100 000000 


Q ss_pred             ---------------------------hhhhccCcccc-ccccCCcchhhhhcc---hhHHHHHHHHHHHHHHHHHHHhh
Q psy4758          81 ---------------------------YIETSLVHSST-VSSSMKVPWKAILTS---LPVWAVLITHLCQNWGYWTLLTE  129 (318)
Q Consensus        81 ---------------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  129 (318)
                                                 +.+.+..+.+. ..++.+....+++..   ++.+..+..++...+.+|+....
T Consensus       269 tL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLl  348 (528)
T KOG0253|consen  269 TLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLL  348 (528)
T ss_pred             HHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence                                       00000000000 002333444555542   45566667777777777777665


Q ss_pred             hhhhhhhhh--cc-----------------eeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758         130 MPSYINSVL--QF-----------------DIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL  190 (318)
Q Consensus       130 ~p~~l~~~~--g~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~  190 (318)
                      ...+.+...  +.                 +....-.=..+..+..+.|.++.+++.||+|||+.+          ...+
T Consensus       349 ttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTM----------al~l  418 (528)
T KOG0253|consen  349 TTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTM----------ALSL  418 (528)
T ss_pred             HHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHH----------HHHH
Confidence            555554311  11                 111111123455678899999999999999999987          7788


Q ss_pred             HHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         191 WGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      ++.++..+++....+.. ....+.+.+-.+........+.|..|++|+. |+++.|....+.++|+.+.|.++ ...+. 
T Consensus       419 ~~f~iflfll~~c~~rn-~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~-  495 (528)
T KOG0253|consen  419 ILFGIFLFLLTTCKTRN-AYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL-  495 (528)
T ss_pred             HHHHHHHHHHHHhcCcc-hhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc-
Confidence            88888877777666555 3444555555666667888899999999999 99999999999999999999998 33333 


Q ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758         270 TSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV  301 (318)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (318)
                          .-..+..+.+.+++++.+...+++-+.+
T Consensus       496 ----s~sl~i~vy~~~~ilagIavcffPiEtk  523 (528)
T KOG0253|consen  496 ----STSLPIFVYGALFILAGIAVCFFPIETK  523 (528)
T ss_pred             ----ceeehHHHHHHHHHHHHHHheeeeeccC
Confidence                2233455666777777777776665443

>KOG1330|consensus

Probab=99.81  E-value=4.8e-20  Score=151.54  Aligned_cols=261  Identities=12%  Similarity=0.060  Sum_probs=177.0

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      |+|.||..+|++++++++.+.++|..+|.+.+..+.+....|||.|+..++++++++++.+++.+|+++..+...+.+..
T Consensus       146 IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~  225 (493)
T KOG1330|consen  146 IADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK  225 (493)
T ss_pred             hhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCc
Confidence            58999999999999999999999999999999999998556999999999999999999999998876532211111110


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh---hcceeechhhhchHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV---LQFDIKSNGFLSAAPYLAQW  157 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---~g~~~~~~~~~~~~~~~~~~  157 (318)
                      .        .+.......+.+.+.|+|.+....+.+....+...++..|.|.++...   .|.+..+..++..+...++.
T Consensus       226 ~--------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~  297 (493)
T KOG1330|consen  226 M--------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGS  297 (493)
T ss_pred             C--------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhch
Confidence            0        000022334555667778888788888887777777777888777543   35566677777888888999


Q ss_pred             HHHHHHHHhHHHHhhhcCcc-hHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhcccccccccccc
Q psy4758         158 ILILVFSWLADYIVAKQILS-PTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDL  235 (318)
Q Consensus       158 ~~~~~~g~l~dr~g~~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (318)
                      +|.+++|.++||+.++..-. ...+.......+..+.+..+.+......... ..+.++.++.......+....-...++
T Consensus       298 lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~v  377 (493)
T KOG1330|consen  298 LGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEV  377 (493)
T ss_pred             hhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEe
Confidence            99999999999976632110 0011122233344444444444444443333 444555555555555555544444454


Q ss_pred             -CccchhhHHHHHHHHHHHHH-hHhhhhhheeeccC
Q psy4758         236 -SPNFAGTLMGFTNGCANIAS-ILGPLFVGFIVTDN  269 (318)
Q Consensus       236 -~~~~~~~~~g~~~~~~~~g~-~~~~~~~g~l~~~~  269 (318)
                       +|++|.+++++...+..+.+ +-+|++.|.+.|+.
T Consensus       378 V~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l  413 (493)
T KOG1330|consen  378 VPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL  413 (493)
T ss_pred             cCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence             45559999999977766554 55666999998874

>KOG3764|consensus

Probab=99.81  E-value=1.7e-19  Score=145.38  Aligned_cols=264  Identities=16%  Similarity=0.100  Sum_probs=195.1

Q ss_pred             CccCCCC-CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           2 SKWAPPM-ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         2 ~~~~~~~-~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      +|.||++ ||++++|+...+.++|-.+||++|+.+.+. .|.+.+|.+.++++++...+.++.++.+..+++.       
T Consensus       185 Ad~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~-------  256 (464)
T KOG3764|consen  185 ADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-AGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS-------  256 (464)
T ss_pred             HHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-cCCcCcHHHHHHHHHHHHHHHHheeCccccCccc-------
Confidence            5677765 589999999999999999999999999999 9999999999999999878777766443322210       


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (318)
                                   ..+..++++++++|.++.........+.+.......++.+..+.+..+.-+.|..+....+...+++
T Consensus       257 -------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~  323 (464)
T KOG3764|consen  257 -------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGT  323 (464)
T ss_pred             -------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccC
Confidence                         3344678899999999999888888888888888888998888777455589999999999999999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhh---hccccccccccccCc
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINA---GTYTGFLSNHLDLSP  237 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  237 (318)
                      .+.|.+.||++.-+.+        ....+++..+++....++.++...+.+....++.+...   ...+...........
T Consensus       324 ~lfg~la~k~~~~~wl--------~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~  395 (464)
T KOG3764|consen  324 NLFGKLADKYPHLRWL--------LSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHV  395 (464)
T ss_pred             chHHHHHHhcCchhHH--------HHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhc
Confidence            9999999999944322        12455555555555555555443333333333222222   222333333322222


Q ss_pred             c---chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         238 N---FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       238 ~---~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      +   -.|..+++......+|.++||.++|.+.+.    .++.+...+.++..++-..++..++.
T Consensus       396 s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~----iGF~wl~~iig~~n~iyapvl~ll~~  455 (464)
T KOG3764|consen  396 SGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA----IGFEWLMTIIGILNLIYAPVLLLLRI  455 (464)
T ss_pred             cccceeeeHHHHHHHHHHHhhhccccccchheee----hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2   278999999999999999999999999999    78888888888777776666555543

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.78  E-value=2.9e-17  Score=142.92  Aligned_cols=288  Identities=14%  Similarity=0.112  Sum_probs=185.7

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CCCChhHh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQH-PFISLEER   79 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   79 (318)
                      ++|..|.|.|....++.....-+....++.++..+..+ .+|||.|++.++...+..++.+++...+++++ +..+...+
T Consensus       155 isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~  233 (599)
T PF06609_consen  155 ISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-SGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKR  233 (599)
T ss_pred             HHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-CCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHH
Confidence            46889999998888877776666666788888877776 79999999998887776555444433222211 11111111


Q ss_pred             hhhhhccC-------------------------cc-----------------------ccc-cccCCcchhhhhcc-hhH
Q psy4758          80 IYIETSLV-------------------------HS-----------------------STV-SSSMKVPWKAILTS-LPV  109 (318)
Q Consensus        80 ~~~~~~~~-------------------------~~-----------------------~~~-~~~~~~~~~~~~~~-~~~  109 (318)
                      +.. .+.+                         .+                       +.. ..+++.-..+++|+ |.+
T Consensus       234 ~~l-~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~  312 (599)
T PF06609_consen  234 EQL-KELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGF  312 (599)
T ss_pred             HHH-HHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHH
Confidence            110 0000                         00                       111 11233345578887 556


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceee---chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIK---SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      ....+..+...+.++....+.|......++-++.   +.++...+.+++..++..+.|.+..++++-|..         +
T Consensus       313 ~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~---------l  383 (599)
T PF06609_consen  313 AALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQ---------L  383 (599)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHH---------H
Confidence            6667777788888888888889888877766653   567888888899999999999999888765533         3


Q ss_pred             HHHHHHHHHHHHHHHhcC--chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758         187 TIGLWGSAAALVGLSFVG--DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~  264 (318)
                      +.+.++..+++.++....  +........++.+.+.+....+.........++++-|++.|+..+++.+|+.+|..+...
T Consensus       384 i~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~  463 (599)
T PF06609_consen  384 IFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA  463 (599)
T ss_pred             HHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            445555554444443332  222234444455555555444444444444455559999999999999999999988866


Q ss_pred             eeccC----------------------------------------------------------CCccchHHHHHHHHHHH
Q psy4758         265 IVTDN----------------------------------------------------------TSVSQWQTIFLIAAAIF  286 (318)
Q Consensus       265 l~~~~----------------------------------------------------------~~~~~~~~~~~~~~~~~  286 (318)
                      +....                                                          ....+|+.+|+....+.
T Consensus       464 I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG  543 (599)
T PF06609_consen  464 IFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFG  543 (599)
T ss_pred             HHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55321                                                          11136788899888888


Q ss_pred             HHHHHHHHhhccc
Q psy4758         287 FFGNLIFLIFGTS  299 (318)
Q Consensus       287 ~~~~~~~~~~~~~  299 (318)
                      .++++..++++..
T Consensus       544 ~vaiiaa~fl~d~  556 (599)
T PF06609_consen  544 VVAIIAALFLGDI  556 (599)
T ss_pred             HHHHHHHHHcCCh
Confidence            8888888877543

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.77  E-value=3e-17  Score=147.18  Aligned_cols=172  Identities=15%  Similarity=0.183  Sum_probs=125.5

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC--C-------------------CchHHHHHHHHHHHHHHHH
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP--W-------------------GWPSIFYVSGAVAIVWAAA   59 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~--~-------------------gWr~~f~~~~~~~~~~~~~   59 (318)
                      +.|++|+++|++++++++.+..+|.++|+++++++.+..  +                   +||..|++.+++.++.++.
T Consensus       197 i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~  276 (633)
T TIGR00805       197 IDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP  276 (633)
T ss_pred             hhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999987531  1                   2778899988888887655


Q ss_pred             HHHHhcCC-CCCCCCCC--hhHhhhhhhccCcccc----ccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhh
Q psy4758          60 WCYIGANS-PAQHPFIS--LEERIYIETSLVHSST----VSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPS  132 (318)
Q Consensus        60 ~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  132 (318)
                      .+ ++|++ |++.++.+  ..+++...+..++...    ..++....++++++||.++...+..++....++++..|+|.
T Consensus       277 l~-~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~  355 (633)
T TIGR00805       277 FF-FFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK  355 (633)
T ss_pred             HH-hCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44 45543 33211111  0110000000000000    00111235678999999999999999999999999999999


Q ss_pred             hhhhhhcceeechhhhchHHHH-HHHHHHHHHHHhHHHHhhh
Q psy4758         133 YINSVLQFDIKSNGFLSAAPYL-AQWILILVFSWLADYIVAK  173 (318)
Q Consensus       133 ~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~  173 (318)
                      |+++++|+++.+++.+.....+ +.+++.+++|+++||++.+
T Consensus       356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~  397 (633)
T TIGR00805       356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN  397 (633)
T ss_pred             HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence            9999999999999999887776 5789999999999999844

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>KOG4686|consensus

Probab=99.76  E-value=5.5e-17  Score=125.30  Aligned_cols=276  Identities=14%  Similarity=0.151  Sum_probs=168.9

Q ss_pred             ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC---CCC--chHHH---HHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy4758           3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS---PWG--WPSIF---YVSGAVAIVWAAAWCYIGANSPAQHPFI   74 (318)
Q Consensus         3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~---~~g--Wr~~f---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (318)
                      -||..||.+.++|+..+..-+|...--.+.+++.+.   -++  =+...   ...+...+...+.....+       ...
T Consensus       163 ~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~l-------g~~  235 (459)
T KOG4686|consen  163 YWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL-------GLS  235 (459)
T ss_pred             EEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh-------hhh
Confidence            588999999999999999999988776666666653   010  01111   111111111111111110       000


Q ss_pred             ChhHhhhhhhccCccccccccCCcchhhhhc-chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHH
Q psy4758          75 SLEERIYIETSLVHSSTVSSSMKVPWKAILT-SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPY  153 (318)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~  153 (318)
                      ++..++....+...     ..+.....+... .|.+|.+.++..++....+.+....|.++++.+|+|+..++.+.+...
T Consensus       236 D~rAerilh~e~g~-----~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy  310 (459)
T KOG4686|consen  236 DDRAERILHLEEGF-----LGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVY  310 (459)
T ss_pred             hhHHHHHHhhhcCc-----ccCCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhh
Confidence            01000000000000     000011112211 378999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccccc
Q psy4758         154 LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHL  233 (318)
Q Consensus       154 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (318)
                      ..+.+.+++.|.++||.|++...         ...+++....+-..+.+..-+++  ....+++......... .+....
T Consensus       311 ~Isav~spvfg~i~Dk~G~n~~w---------v~~a~~~tl~~H~~l~Ft~lsPy--~~m~~lGLsysllAcs-lWP~va  378 (459)
T KOG4686|consen  311 GISAVLSPVFGAISDKYGFNLWW---------VASACILTLLGHSGLFFTFLSPY--TSMTFLGLSYSLLACS-LWPCVA  378 (459)
T ss_pred             hhhhhhhhhHHHhHhhhcceehh---------HHHHHHHHHHHhhhHHhhhccHH--HHHHHHhhhHHHHHHH-Hhhhhh
Confidence            99999999999999999998754         23444555555555555443332  2223333333222222 222333


Q ss_pred             ccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy4758         234 DLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ  302 (318)
Q Consensus       234 ~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (318)
                      .+.|++ -|++.|.++.++|+|-++.|.+.|.+.|..++......-|...+.+.+.+..+.+...++++.
T Consensus       379 ~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~g  448 (459)
T KOG4686|consen  379 SLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQSG  448 (459)
T ss_pred             hhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheeccccC
Confidence            445555 999999999999999999999999999996553333444445555555555555555544433

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.76  E-value=5.6e-17  Score=131.65  Aligned_cols=245  Identities=12%  Similarity=0.068  Sum_probs=173.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC------------------CCCchHHHHHHHHHHHHHHHHHHHH
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS------------------PWGWPSIFYVSGAVAIVWAAAWCYI   63 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------------------~~gWr~~f~~~~~~~~~~~~~~~~~   63 (318)
                      +...|+++-.+.+++.+...++|.+++|++++.+..+                  ...||++|...+...+++.+.... 
T Consensus       130 ~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~-  208 (422)
T COG0738         130 TLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILL-  208 (422)
T ss_pred             HHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh-
Confidence            3456777789999999999999999999999988762                  135888998887776665443322 


Q ss_pred             hcCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceee
Q psy4758          64 GANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIK  143 (318)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~  143 (318)
                       .+.|+.++.. +++.              +.+.....+++|+|.++...+..+++........+|++.|+.+..|.+..
T Consensus       209 -~k~p~~~~~~-~~~~--------------~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~  272 (422)
T COG0738         209 -SKLPDLQVAA-PSLG--------------ASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQ  272 (422)
T ss_pred             -ccCCcCCccc-cccc--------------ccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHH
Confidence             2222221111 1110              11112567899999999999999999999999999999999998899999


Q ss_pred             chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhh
Q psy4758         144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAG  223 (318)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (318)
                      ++....+....+.++|++++.++..|+...|.+          ........+.++.....++.. .......++.+ .+.
T Consensus       273 ~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~L----------af~a~~~ill~~~~~l~~g~v-~~~~l~~ig~F-~si  340 (422)
T COG0738         273 QAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYL----------AFYALIAILLLLAVALIGGVV-ALYALFLIGLF-NSI  340 (422)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHHHHHHHHhcChH-HHHHHHHHHHH-hHH
Confidence            999999999999999999999999999999866          444444444444444454432 33334444444 445


Q ss_pred             ccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHH
Q psy4758         224 TYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFL  280 (318)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~  280 (318)
                      .+|...+...+..|++...+.+ .-.+.-+|+++-|.+.|++.|.    .+....+.
T Consensus       341 mfPTIfslal~~l~~~ts~~s~-~l~maivGGAiiP~l~G~i~d~----~g~~~~~~  392 (422)
T COG0738         341 MFPTIFSLALKNLGEHTSVGSG-LLVMAIVGGAIIPPLQGVIADM----FGIQLTFL  392 (422)
T ss_pred             HHHHHHHHHHhccCccccccce-eeeeheecchHHHHHHHHHHHh----hhhHHHHH
Confidence            5666666666666654444333 4566788999999999999999    44444444

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.75  E-value=3.3e-16  Score=135.44  Aligned_cols=240  Identities=18%  Similarity=0.202  Sum_probs=176.4

Q ss_pred             CccCC-CCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC----C-C-CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy4758           2 SKWAP-PMERARLFSFAFSGTQFGNLVTLPVAGLLAGS----P-W-GWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI   74 (318)
Q Consensus         2 ~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~----~-~-gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (318)
                      .|..+ ++||.+..+..+.+..+|.++...+.+.+.+.    + . +|++..++.+++.++..++..+..||.+++.+  
T Consensus       129 ~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~--  206 (428)
T PF13347_consen  129 PELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVT--  206 (428)
T ss_pred             ccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccc--
Confidence            56666 47899999999999999987776666665532    1 1 79999999999999888888888777221111  


Q ss_pred             ChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH
Q psy4758          75 SLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL  154 (318)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~  154 (318)
                       +++++             .+.+..++++++||.++.+.+..++...+........+.|.++..|.+ ...+.......+
T Consensus       207 -~~~~~-------------~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~  271 (428)
T PF13347_consen  207 -EQEKK-------------ISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFV  271 (428)
T ss_pred             -ccccc-------------cccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHH
Confidence             01100             334456788999999999999999988888888888888888877776 556677778889


Q ss_pred             HHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-chhH-HHHHHHHHHHHHhhhccccccccc
Q psy4758         155 AQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG-DNLV-GAITCLTLAIAINAGTYTGFLSNH  232 (318)
Q Consensus       155 ~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  232 (318)
                      +.+++.++.++++||+|+|+.+          ..+..+.+++.+.+.+.+ ++.. ..+...+.+.+. +.......+..
T Consensus       272 ~~~v~~~~~~~l~~r~gk~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~-~~~~~~~~a~~  340 (428)
T PF13347_consen  272 ASIVGSPLWGRLSKRFGKKKVY----------IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGY-GAFFVIPWAML  340 (428)
T ss_pred             HHHHHHHHHHHHHHHccceeeh----------hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhh-ccccccccccc
Confidence            9999999999999999999987          667777777766666665 3333 333444444443 33445555555


Q ss_pred             cccCc--------cchhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         233 LDLSP--------NFAGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       233 ~~~~~--------~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      .|+.+        ++.|...|+.+....++..+++.+.+.+.+..
T Consensus       341 ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~  385 (428)
T PF13347_consen  341 ADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV  385 (428)
T ss_pred             ccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            55544        22689999999999999999999999887663

>KOG2563|consensus

Probab=99.74  E-value=9.2e-17  Score=132.01  Aligned_cols=276  Identities=17%  Similarity=0.131  Sum_probs=191.1

Q ss_pred             ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC-----CCchH--HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q psy4758           3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP-----WGWPS--IFYVSGAVAIVWAAAWCYIGANSPAQHPFIS   75 (318)
Q Consensus         3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~-----~gWr~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (318)
                      -|||++||+.+..+-.++..+|.+++.++...+..+.     ..|..  .|+..+.++.+..++..+..++.|+.++...
T Consensus       167 ~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s  246 (480)
T KOG2563|consen  167 VWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSAS  246 (480)
T ss_pred             hhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchh
Confidence            5999999999999999999999999999998887642     35655  3555555555554555556666555433222


Q ss_pred             hhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHH
Q psy4758          76 LEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLA  155 (318)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~  155 (318)
                      .....+            .+-..+.++.++|+++....+.+......+++..+.+-.-+.. .|++...+|+......++
T Consensus       247 ~~~~~~------------~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~  313 (480)
T KOG2563|consen  247 QAALQD------------ASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVA  313 (480)
T ss_pred             Hhhhhc------------CcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHH
Confidence            111110            2344567889999999999999999888888888877766665 688889999999999999


Q ss_pred             HHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHH-HHHHHhc--CchhH-HHHHHHHHHHHHhhhcccccccc
Q psy4758         156 QWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAA-LVGLSFV--GDNLV-GAITCLTLAIAINAGTYTGFLSN  231 (318)
Q Consensus       156 ~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  231 (318)
                      +++++.+.|.+.||.+.-+...         .+......++ +.+....  ..... ....+..++.+..+..+...-.-
T Consensus       314 Gmlga~~~gii~Dktk~fk~~~---------~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~Elg  384 (480)
T KOG2563|consen  314 GMLGALASGIIADKTKKFKLTT---------LVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELG  384 (480)
T ss_pred             HHHHHHHHHhhhhhhhhHHHHH---------HHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeee
Confidence            9999999999999998766431         2223333333 2222211  12222 44445555565555555555566


Q ss_pred             ccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         232 HLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       232 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      .+..+|..-++..|+.+..+++.+.+-..+.+...+..+...++....+......++++++..++++..
T Consensus       385 vE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y  453 (480)
T KOG2563|consen  385 VETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDY  453 (480)
T ss_pred             eeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence            677789999999999999999999999999999888744322344455555666666666666665443

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.72  E-value=1.2e-15  Score=129.36  Aligned_cols=264  Identities=15%  Similarity=0.174  Sum_probs=174.3

Q ss_pred             CchhHHHHHHhhHhhHHHhHHHH-HHHHhCC-C-CCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhc
Q psy4758           9 ERARLFSFAFSGTQFGNLVTLPV-AGLLAGS-P-WGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETS   85 (318)
Q Consensus         9 ~r~~~~~~~~~~~~~G~~~~~~~-~~~l~~~-~-~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (318)
                      ++++-.|-.-...++|.+++... +..+... + .+..+.+++.+..+++. ....+.+|+.|++++..++.+       
T Consensus       122 ~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll-~~~~l~lp~~~~~~~~~~~~~-------  193 (400)
T PF03825_consen  122 DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLL-AGFALFLPKTPPKRSAKESVK-------  193 (400)
T ss_pred             cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHH-HHHHHhCCCCccccccCCCcc-------
Confidence            44555566666667777666443 2223222 0 12334566666555443 233445677663222111100       


Q ss_pred             cCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHH
Q psy4758          86 LVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSW  165 (318)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~  165 (318)
                              +....+..+++|+|+++.+.+..++...+......+.+.|+++.-|.+....+.+.+...++.++.-...++
T Consensus       194 --------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~  265 (400)
T PF03825_consen  194 --------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGR  265 (400)
T ss_pred             --------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence                    111223457899999999999999999999999999999999943377788888888888889999999999


Q ss_pred             hHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHH-HHHHH----HHHHHHhhhccccccccccccCccc-
Q psy4758         166 LADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVG-AITCL----TLAIAINAGTYTGFLSNHLDLSPNF-  239 (318)
Q Consensus       166 l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (318)
                      +..|+|.++.+          .++.+..++=..++....++.+. .....    .-+.. .+........+..+..|++ 
T Consensus       266 ~~~r~g~~~ll----------~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~t-f~~~~~a~~~yi~~~~p~~~  334 (400)
T PF03825_consen  266 FLKRFGIKWLL----------LLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLT-FGLFHAASVRYIDRIAPPEL  334 (400)
T ss_pred             HHHhcCHHHHH----------HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHH-HHHHHHHHHHHHHHhCCccc
Confidence            99999999876          77888888888888777444332 22222    23333 3334455556666777776 


Q ss_pred             hhhHHHHHHHH-HHHHHhHhhhhhheeeccCCCc--cchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         240 AGTLMGFTNGC-ANIASILGPLFVGFIVTDNTSV--SQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       240 ~~~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      |+++.++++.. ..+|..+|..++|+++|+.+..  ..|...+.+.+++.++..++.....|+
T Consensus       335 ~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~  397 (400)
T PF03825_consen  335 RATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP  397 (400)
T ss_pred             hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            99999998776 5699999999999999985433  345556666666666666666555443

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.71  E-value=1.4e-15  Score=132.85  Aligned_cols=293  Identities=12%  Similarity=0.128  Sum_probs=158.9

Q ss_pred             CCccCCCC--CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC----CCC
Q psy4758           1 MSKWAPPM--ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQH----PFI   74 (318)
Q Consensus         1 i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~   74 (318)
                      ++|++|++  +|+++++++..+.++|..+||.+++++.++ .|||+.|++.++ +++..++.+...++..++.    ++.
T Consensus       130 i~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~-~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (489)
T PRK10207        130 LSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK-FGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGSEPDHK  207 (489)
T ss_pred             HHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh-hChHHHHHHHHH-HHHHHHHHHHHcchhhcccCCCCCcc
Confidence            35788877  458899999999999999999999999998 899999999654 4444444444444322111    010


Q ss_pred             ChhHhhhhh------------hccCccccccc---------------cCCcchhhhhcchhHHHHHHH--HHHHHHHHHH
Q psy4758          75 SLEERIYIE------------TSLVHSSTVSS---------------SMKVPWKAILTSLPVWAVLIT--HLCQNWGYWT  125 (318)
Q Consensus        75 ~~~~~~~~~------------~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  125 (318)
                      +.+......            ....+......               .......+++|+|.+....+.  .......+..
T Consensus       208 ~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q  287 (489)
T PRK10207        208 PMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQ  287 (489)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            001000000            00000000000               000001145666665543322  3334444555


Q ss_pred             HHhhhhhhhhhhhccee----echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH-
Q psy4758         126 LLTEMPSYINSVLQFDI----KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL-  200 (318)
Q Consensus       126 ~~~~~p~~l~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-  200 (318)
                      ..+.++.+.++..+.+.    .....+.+...+..++.+++.+++.||+++|+.-... ..|  ..+++++.+++++.+ 
T Consensus       288 ~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~-~~k--~~~G~~l~~~~~~~~~  364 (489)
T PRK10207        288 MPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSM-PMK--FTLGMFLCSLGFLTAA  364 (489)
T ss_pred             cccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCc-HHH--HHHHHHHHHHHHHHHH
Confidence            55677777764222211    1122333344566667888899999999988630000 000  144555555554322 


Q ss_pred             ----HhcC-----chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccC--
Q psy4758         201 ----SFVG-----DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDN--  269 (318)
Q Consensus       201 ----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~--  269 (318)
                          ....     +.++.....++.+.+.....++.........+++.+|.++|+.+...++|+.++..+........  
T Consensus       365 ~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~  444 (489)
T PRK10207        365 AAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNI  444 (489)
T ss_pred             HHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence                1111     11223334445555544444444444444444444999999999999999999988876542110  


Q ss_pred             ----CCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         270 ----TSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       270 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                          .....+...|...++..+++.++.+...+
T Consensus       445 ~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~  477 (489)
T PRK10207        445 TDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP  477 (489)
T ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                00123667777777776666666555443

>PRK09669 putative symporter YagG; Provisional

Probab=99.71  E-value=2.1e-16  Score=137.40  Aligned_cols=239  Identities=15%  Similarity=0.058  Sum_probs=146.3

Q ss_pred             CccC-CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy4758           2 SKWA-PPMERARLFSFAFSGTQFGNLVTLPVAGLLAG------SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI   74 (318)
Q Consensus         2 ~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~------~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (318)
                      +|+. +++||++..++...+..+|..+++.+...+..      ...+|+..+.+.++++++..+..++..+|.+++++  
T Consensus       135 ~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~--  212 (444)
T PRK09669        135 GAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEV--  212 (444)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCC--
Confidence            3555 45789999898888888887777665443321      12589999988888887766666665565432211  


Q ss_pred             ChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH
Q psy4758          75 SLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL  154 (318)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~  154 (318)
                        +++              .+...++++++|||.++.+.+..++............+.|.+...+. +...+.+.....+
T Consensus       213 --~~~--------------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i  275 (444)
T PRK09669        213 --DNS--------------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMI  275 (444)
T ss_pred             --cCC--------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHH
Confidence              000              11234567889999998887777766666655445444444443332 2333344455567


Q ss_pred             HHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH-HHHhcCchhH-HHHHHHHHHHHHhhhccccccccc
Q psy4758         155 AQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV-GLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNH  232 (318)
Q Consensus       155 ~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  232 (318)
                      ..+++.++++++.||+|+|+.+          ..+.++..+... .....+++.. ..+..++.+.+.. ...+...+..
T Consensus       276 ~~ii~~~~~~~l~~r~gk~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~am~  344 (444)
T PRK09669        276 AGLFGALLSERLLGKFDRVRAF----------KWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQN-LTTPLQWSMF  344 (444)
T ss_pred             HHHHHHHHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            7888889999999999999865          333333332222 2222223332 2333333344333 3334444455


Q ss_pred             cccCc-------cc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758         233 LDLSP-------NF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT  270 (318)
Q Consensus       233 ~~~~~-------~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  270 (318)
                      .|..+       ++ .|...|..+....+|.++++.+.|.+.+..+
T Consensus       345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G  390 (444)
T PRK09669        345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD  390 (444)
T ss_pred             HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            45432       22 5778899999999999999999999887643

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.71  E-value=5.3e-16  Score=126.90  Aligned_cols=274  Identities=15%  Similarity=0.108  Sum_probs=197.0

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHH--HHHhC---------------CCCCchHHHHHHHHHHHHHHHHHHHHh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVA--GLLAG---------------SPWGWPSIFYVSGAVAIVWAAAWCYIG   64 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~--~~l~~---------------~~~gWr~~f~~~~~~~~~~~~~~~~~~   64 (318)
                      .|..++++-++..++-.....+|+.+.-.+.  .....               ....=|..+.+.++.-++..+..++..
T Consensus       141 ~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v  220 (438)
T COG2270         141 PRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNV  220 (438)
T ss_pred             hhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcc
Confidence            3567777778888777777777776655443  11111               113568888888888888878888887


Q ss_pred             cCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeec
Q psy4758          65 ANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKS  144 (318)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~  144 (318)
                      ||.++...+..+.-....           ++-...++++.+++++..+.+..+++.-+.+++......|-.+.+|++..+
T Consensus       221 ~~~~~~~~~~~~~l~~g~-----------k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~  289 (438)
T COG2270         221 HDAEKISSPPPTALRNGF-----------KELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTE  289 (438)
T ss_pred             cccccccccchHHHHHHH-----------HHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHH
Confidence            776643211111100000           223356778888899999999999999999999999999999889999999


Q ss_pred             hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhc
Q psy4758         145 NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGT  224 (318)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (318)
                      .........+.+++|+++.|++.||+|.|+++          ..++++..+..+...+...........++++.+.+...
T Consensus       290 lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl----------~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q  359 (438)
T COG2270         290 LLLIGIALSVVAALGAIIAGFLDERFGSKPVL----------MIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ  359 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCceee----------hHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence            99999999999999999999999999999877          45555555544444444443334455566666655544


Q ss_pred             cccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         225 YTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      ...-......++|++.++.+|+++..++..+.+||.+.+.+.+.++   +-+..+....++..++.++....+.+
T Consensus       360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg---~~r~g~~~i~vll~iGl~~L~~v~~~  431 (438)
T COG2270         360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG---SSRAGVLSIIVLLLIGLLLLLRVKVP  431 (438)
T ss_pred             HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc---chhhHHHHHHHHHHhhHhhEEeecCC
Confidence            4444444444555569999999999999999999999999999875   34777777777777777666555443

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.70  E-value=1.8e-15  Score=126.24  Aligned_cols=263  Identities=16%  Similarity=0.141  Sum_probs=178.8

Q ss_pred             hhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccCccc
Q psy4758          11 ARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLVHSS   90 (318)
Q Consensus        11 ~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (318)
                      +.-.|-.-+..++|.+++..++|.+.+  .+=+..||+....+++..++.....|+.+++.+..+.++.+          
T Consensus       137 ~feYG~~R~wGSig~ai~s~~~G~L~~--i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~----------  204 (412)
T PF01306_consen  137 GFEYGRARMWGSIGFAIASLLAGILFN--INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAK----------  204 (412)
T ss_dssp             SS-HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS-----------
T ss_pred             cCCcchHHHHhhHHHHHHHHHhheeee--eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccC----------
Confidence            444566778889999999999999876  34577888877666665455444444433322111111000          


Q ss_pred             cccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh---hcceeechhhhchHHHHHHHHHHHHHHHhH
Q psy4758          91 TVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV---LQFDIKSNGFLSAAPYLAQWILILVFSWLA  167 (318)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~  167 (318)
                       +++.+..+..+++|+|++|.+.+........+..+....|.|+.+.   .+.+....|++.+...+..++.-.+..++.
T Consensus       205 -~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li  283 (412)
T PF01306_consen  205 -KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLI  283 (412)
T ss_dssp             ------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence             0011123456789999999998888887778888877777777642   345566788888888899999999999999


Q ss_pred             HHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHH
Q psy4758         168 DYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGF  246 (318)
Q Consensus       168 dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~  246 (318)
                      +|+|.|+.+          .++..+..+=.....+.++.+.....-.+-+.-+.. ......-+..+.+|++ .++...+
T Consensus       284 ~rig~k~~L----------llag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l-~lva~fkYI~~~fd~rlsAt~y~v  352 (412)
T PF01306_consen  284 NRIGAKNLL----------LLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPL-LLVAAFKYITAHFDKRLSATLYLV  352 (412)
T ss_dssp             HHH-HHHHH----------HHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHS-GGGHHHHHHH
T ss_pred             HhcChHhHH----------HHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHhHHHHHHHH
Confidence            999999977          677777888888888887766444444444444433 3344445556667776 7888888


Q ss_pred             H-HHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758         247 T-NGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV  301 (318)
Q Consensus       247 ~-~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (318)
                      . +...+++..+.+.+.|.++|+    .|++.+|++.+.+.+...++..+..++++
T Consensus       353 ~~~~~~~~~~~i~s~~~G~lyd~----~G~~~tylimg~iv~~~~li~~f~l~~~~  404 (412)
T PF01306_consen  353 GFQFAKQIGIIILSPLAGYLYDR----IGFQHTYLIMGLIVLPFTLISAFTLKKDK  404 (412)
T ss_dssp             HHTTTHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred             HHHHHHHHHHHHHhhhHHhhHhh----cCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence            5 678889999999999999999    88999998888887776666665554433

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.70  E-value=2.4e-16  Score=137.85  Aligned_cols=243  Identities=14%  Similarity=0.031  Sum_probs=148.9

Q ss_pred             CccC-CCCCchhHHHHHHhhHhhHHHhHHHHHHHHh----C--CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy4758           2 SKWA-PPMERARLFSFAFSGTQFGNLVTLPVAGLLA----G--SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFI   74 (318)
Q Consensus         2 ~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~----~--~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (318)
                      +|.. +++||.+..++...+.++|..+.+.+...+.    .  ...+|+....+.+++.++..+..++..||.+++....
T Consensus       132 ~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~  211 (473)
T PRK10429        132 PTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV  211 (473)
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccc
Confidence            4555 5789999999977777777666655544331    1  1136888877777777766566666566653221100


Q ss_pred             ChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH
Q psy4758          75 SLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL  154 (318)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~  154 (318)
                      .++++           +  .+.+..++.+++||.++.+.+..++..........+.+.|.+...+ ++...+.+.....+
T Consensus       212 ~~~~~-----------~--~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i  277 (473)
T PRK10429        212 SAEGS-----------H--LTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGA  277 (473)
T ss_pred             ccccc-----------C--CCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHH
Confidence            00000           0  1222345567789999888888888877777777777766665433 44556666666678


Q ss_pred             HHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH---hc-CchhH-HHHHHHHHHHHHhhhcccccc
Q psy4758         155 AQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS---FV-GDNLV-GAITCLTLAIAINAGTYTGFL  229 (318)
Q Consensus       155 ~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  229 (318)
                      +.+++.++.+++.||+|+|+.+          ..+..+..++.+.+.   .. ++... ..+..++.+.+... ......
T Consensus       278 ~~ii~~~~~~~l~~r~gkk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~-~~~~~~  346 (473)
T PRK10429        278 ANLVTLILFPRLVKSLSRRILW----------AGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTAL-FWVLQV  346 (473)
T ss_pred             HHHHHHHHHHHHHHHcCcHHHH----------HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHH-HHHHHH
Confidence            8899999999999999999876          334433333332222   12 22222 22222333333322 233334


Q ss_pred             ccccccCc-------cc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         230 SNHLDLSP-------NF-AGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       230 ~~~~~~~~-------~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      +...|..+       ++ .|..+|..+....++..+++.+.|.+.+..
T Consensus       347 am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~  394 (473)
T PRK10429        347 IMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI  394 (473)
T ss_pred             HHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            44444432       22 566899999999999999999999988753

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.70  E-value=8.3e-21  Score=165.45  Aligned_cols=282  Identities=16%  Similarity=0.182  Sum_probs=171.0

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC--CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS--PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQH---PFIS   75 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~   75 (318)
                      +.|..|+++|++..++.+.+..+|.+++..++..+.+.  +.+||..+.+.++++++. .+...++||+|+--   ++.+
T Consensus       127 ~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~-~~~~~~~pESP~wL~~~~~~~  205 (451)
T PF00083_consen  127 ISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV-LLLRFFLPESPRWLLSKGRDE  205 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccceeccccccc
Confidence            46899999999999999999999999998887666443  135999999999888765 44557889999731   1111


Q ss_pred             hhHhhhhh--------hccCccc---cccccCCcchhhhhcchh----HHHHHHHHHHH-HHHHHHHHhhhhhhhhhhhc
Q psy4758          76 LEERIYIE--------TSLVHSS---TVSSSMKVPWKAILTSLP----VWAVLITHLCQ-NWGYWTLLTEMPSYINSVLQ  139 (318)
Q Consensus        76 ~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~p~~l~~~~g  139 (318)
                      +.++...+        ++.+++.   ++.++.+..++++++++.    ........... ..+.+....+.|.++++ .+
T Consensus       206 ~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~  284 (451)
T PF00083_consen  206 EAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AG  284 (451)
T ss_pred             ccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-cc
Confidence            11111000        0000000   000111245677777643    22222223223 33444555666666665 67


Q ss_pred             ceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH----hcCch----hHHHH
Q psy4758         140 FDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS----FVGDN----LVGAI  211 (318)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~  211 (318)
                      .+..  -.......+...++.+++..+.||+|||+.+          ..+..+..++...+.    ...+.    ....+
T Consensus       285 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~----------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  352 (451)
T PF00083_consen  285 ISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLL----------IIGLLLMAICSLILGIIFFLGVSSSSWWSILSI  352 (451)
T ss_pred             cccc--ccccccccccccccccccccccccccccccc----------ccccccccccccccccccccccccccccccccc
Confidence            7666  2233344566777778888999999999877          444444444443332    11222    11122


Q ss_pred             H-HHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHH
Q psy4758         212 T-CLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFG  289 (318)
Q Consensus       212 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  289 (318)
                      . .......+.....+....+..|.+|++ |+++.|+....++++++++|.+...+.+..    +....+.+.++++++.
T Consensus       353 ~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~----~~~~~~~i~~~~~~i~  428 (451)
T PF00083_consen  353 VFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL----GGWGVFLIFAGVCLIA  428 (451)
T ss_pred             eeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccchhhHHHHHHH
Confidence            2 222223333344566667788999998 999999999999999999999999888773    3233555555555555


Q ss_pred             HHHHHhhcccc
Q psy4758         290 NLIFLIFGTSE  300 (318)
Q Consensus       290 ~~~~~~~~~~~  300 (318)
                      .+......+++
T Consensus       429 ~i~~~~~lpET  439 (451)
T PF00083_consen  429 IIFVYFFLPET  439 (451)
T ss_pred             HhheeEEEeeC
Confidence            55554444433

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PRK09848 glucuronide transporter; Provisional

Probab=99.69  E-value=3.1e-16  Score=136.48  Aligned_cols=234  Identities=12%  Similarity=0.050  Sum_probs=142.5

Q ss_pred             CCCCchhHHHHHHhhHh-----hHHHhHHHHHHHHhCC-CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHh
Q psy4758           6 PPMERARLFSFAFSGTQ-----FGNLVTLPVAGLLAGS-PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER   79 (318)
Q Consensus         6 ~~~~r~~~~~~~~~~~~-----~G~~~~~~~~~~l~~~-~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (318)
                      ++++|.+..+....+.+     ++..++|.++...... ..+|.....+.++++++..++.....||+++++.+     +
T Consensus       140 ~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~-----~  214 (448)
T PRK09848        140 QPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA-----Q  214 (448)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc-----C
Confidence            45678888777665433     4455556555543211 01222222233333333333333344554321110     0


Q ss_pred             hhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758          80 IYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL  159 (318)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~  159 (318)
                                    ...+..+++++|||.++...+..++............|.|+++.+|.++...++......++.+++
T Consensus       215 --------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  280 (448)
T PRK09848        215 --------------PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVAS  280 (448)
T ss_pred             --------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHH
Confidence                          111234678999999999988888888888888888898998888887665555555446678889


Q ss_pred             HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchh-H-HHHHHHHHHHHHhhhccccccccccccCc
Q psy4758         160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNL-V-GAITCLTLAIAINAGTYTGFLSNHLDLSP  237 (318)
Q Consensus       160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (318)
                      .++.+++.||+++|+.+          ..+.++..++.+.+.+.+... + .....++.+.+..... +...+...+..+
T Consensus       281 ~~l~~~l~~r~g~~~~~----------~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~-~~~~al~~~~~~  349 (448)
T PRK09848        281 APLVPGMVARIGKKNTF----------LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTM-TVMWALEADTVE  349 (448)
T ss_pred             HHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhh
Confidence            99999999999999876          556666666555555443222 2 2222333344433333 333333334333


Q ss_pred             c--------chhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         238 N--------FAGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       238 ~--------~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      .        ++|...|+.+....+|..+++.+.+.+.+..
T Consensus       350 ~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~  389 (448)
T PRK09848        350 YGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS  389 (448)
T ss_pred             hhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            2        2699999999999999999999998887653

>PRK10054 putative transporter; Provisional

Probab=99.69  E-value=3.8e-16  Score=133.53  Aligned_cols=173  Identities=17%  Similarity=0.160  Sum_probs=130.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      |.++.+.+..++...+......++|.|+++++|+++.+.|+..+...++.+++.++.|+++||+|+|+.+          
T Consensus         7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~----------   76 (395)
T PRK10054          7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM----------   76 (395)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH----------
Confidence            4567777888888888889999999999888999999999999999999999999999999999999876          


Q ss_pred             HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      ..+.++..++.+.+.+.++...........+.+. ....+.......|..|+ +|+++.|+.+...++|..++|.+.+.+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l  155 (395)
T PRK10054         77 LLAITAFASGFIAIPLVNNVTLVVLFFALINCAY-SVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL  155 (395)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5566666666666666555432222222333222 23334445555555555 499999999999999999999999988


Q ss_pred             eccCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758         266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFLI  295 (318)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
                      .+     .+|+..|...+++.+++.+....
T Consensus       156 ~~-----~g~~~~f~~~~~~~~i~~i~~~~  180 (395)
T PRK10054        156 VM-----QSINLPFWLAAICSAFPLVFIQI  180 (395)
T ss_pred             HH-----hccCcHHHHHHHHHHHHHHHHHH
Confidence            64     36888888887777766554443

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.69  E-value=5.5e-16  Score=133.62  Aligned_cols=175  Identities=15%  Similarity=0.170  Sum_probs=131.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH-hhhcCcchHHHHHH
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI-VAKQILSPTVSRKM  184 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~r~~  184 (318)
                      .+.++......+...++++++..++|.|+++.+|+++.+++...........++.+++|+++||+ |||+.+        
T Consensus         8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i--------   79 (493)
T PRK15462          8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV--------   79 (493)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH--------
Confidence            35567777778888899999999999999988999999999999999999999999999999999 999876        


Q ss_pred             HHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCcc---chhhHHHHHHHHHHHHHhHhhh
Q psy4758         185 WNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPN---FAGTLMGFTNGCANIASILGPL  260 (318)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~~~~  260 (318)
                        .++.++..++..++...++... .......+..+ .+...+...++..|.+|+   +|.++.++.+...++|+.++|.
T Consensus        80 --liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG-~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~  156 (493)
T PRK15462         80 --MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCG-YGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI  156 (493)
T ss_pred             --HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHh-cccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence              5666666666555543322111 22222222222 223334445566777765   3999999999999999999999


Q ss_pred             hhheeeccCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758         261 FVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLI  295 (318)
Q Consensus       261 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
                      +.+++.+.    .+|+..|...++.++++.+....
T Consensus       157 l~g~L~~~----~Gw~~~F~iaaigm~l~li~~~~  187 (493)
T PRK15462        157 ACGYAQEE----YSWAMGFGLAAVGMIAGLVIFLC  187 (493)
T ss_pred             HHHHHHhh----hChHHHHHHHHHHHHHHHHHHHH
Confidence            99999887    78999998877766666555544

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.69  E-value=2.2e-15  Score=126.97  Aligned_cols=241  Identities=17%  Similarity=0.107  Sum_probs=176.2

Q ss_pred             CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC----C--CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHh
Q psy4758           6 PPMERARLFSFAFSGTQFGNLVTLPVAGLLAG----S--PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEER   79 (318)
Q Consensus         6 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~----~--~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (318)
                      +++||.+..+..+.+.++|..+...+...+..    .  ..||+..-.+.++++++..+.+++..+|++.+....++..+
T Consensus       143 d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~  222 (467)
T COG2211         143 DPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVK  222 (467)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccc
Confidence            46899999999999999997776655544432    2  35899999999999998888888888887653322111010


Q ss_pred             hhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758          80 IYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL  159 (318)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~  159 (318)
                                    .+.+..+..+++||++...++..++...+.+...+....|.+...|.+.............+.+++
T Consensus       223 --------------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~  288 (467)
T COG2211         223 --------------LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIG  288 (467)
T ss_pred             --------------ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHH
Confidence                          222233456889999999999888888888888899999998888888888888878778888888


Q ss_pred             HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCc-
Q psy4758         160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSP-  237 (318)
Q Consensus       160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  237 (318)
                      .++..++.+|+|+|+.+          .++.++..++...+.+.+.+.. +.++..++.....+...+...+...|... 
T Consensus       289 ~~~~p~L~~~~gkk~~~----------~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDy  358 (467)
T COG2211         289 LILWPRLVKKFGKKKLF----------LIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDY  358 (467)
T ss_pred             HHhHHHHHHHhchHHHH----------HHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhH
Confidence            99999999999999987          6777777777777777764433 33333233333334444444444444322 


Q ss_pred             ------cc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758         238 ------NF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT  270 (318)
Q Consensus       238 ------~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  270 (318)
                            .+ .|...|...++.-+|.+++..+.|++.+..|
T Consensus       359 ge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G  398 (467)
T COG2211         359 GEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG  398 (467)
T ss_pred             HHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence                  22 6888899999999999999999998887643

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.68  E-value=7.6e-15  Score=128.11  Aligned_cols=286  Identities=11%  Similarity=0.098  Sum_probs=166.2

Q ss_pred             CccCCCCC---chhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcC----CCCCCCCC
Q psy4758           2 SKWAPPME---RARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGAN----SPAQHPFI   74 (318)
Q Consensus         2 ~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   74 (318)
                      +|++|+++   |++++++...+.++|.++||.+++++.+. .|||+.|.+.++..++. ++.+.+.++    .|++++..
T Consensus       128 a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~-~g~~~~f~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~  205 (475)
T TIGR00924       128 GKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN-YGYHVGFNLAAVGMVIG-LLTFFAGRHMLRDIGSVPDPL  205 (475)
T ss_pred             HHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHH-HHHHHHcccccccCCCCCCCc
Confidence            57787654   88899999999999999999999999987 89999999987554443 333333332    22111111


Q ss_pred             ChhHhhhhhhc----------------cCccccc------------------cccCCcchhhhhcchhHHHHHHHHHHHH
Q psy4758          75 SLEERIYIETS----------------LVHSSTV------------------SSSMKVPWKAILTSLPVWAVLITHLCQN  120 (318)
Q Consensus        75 ~~~~~~~~~~~----------------~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (318)
                      ++++++.....                ..+....                  ..++.....+-.|.+.+..+.+...+..
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  285 (475)
T TIGR00924       206 SGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFW  285 (475)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHH
Confidence            11111100000                0000000                  0000011111112223444455555556


Q ss_pred             HHHHHHHhhhhhhhhhhhccee----echhhhchHHHHHHHHHHHHHHHhHHHHhhhcC-cchHHHHHHHHHHHHHHHHH
Q psy4758         121 WGYWTLLTEMPSYINSVLQFDI----KSNGFLSAAPYLAQWILILVFSWLADYIVAKQI-LSPTVSRKMWNTIGLWGSAA  195 (318)
Q Consensus       121 ~~~~~~~~~~p~~l~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-~~~~~~r~~~~~~~~~~~~~  195 (318)
                      ..+....+.++.+.++..+.+.    ...+.+.+...+.-++..++..++-.|.++|.. ...    ..-..+++++.++
T Consensus       286 ~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~----~~k~~~G~~l~~~  361 (475)
T TIGR00924       286 VLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTT----PLKFTLGMLFCGA  361 (475)
T ss_pred             HHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCc----HHHHHHHHHHHHH
Confidence            6666666777777766444332    225677777777777777776665566665411 100    0002456677766


Q ss_pred             HHHHHHh---------cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         196 ALVGLSF---------VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       196 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      ++.....         ..+.++.....++.+.+-. ...+.......+..|++ ||+.+|+......+|..+++.+....
T Consensus       362 ~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~-~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~  440 (475)
T TIGR00924       362 SFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGEL-MISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFG  440 (475)
T ss_pred             HHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6665543         1222324444444444443 44556666666777666 99999999999999999999988877


Q ss_pred             eccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      .+.    .++...|...++..+++.++.+...+
T Consensus       441 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  469 (475)
T TIGR00924       441 AVP----QGVTGVFGKIGLVTLLVGVVMALMVP  469 (475)
T ss_pred             hcc----cchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            665    46677777777766666665555443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.68  E-value=1e-15  Score=133.55  Aligned_cols=176  Identities=18%  Similarity=0.145  Sum_probs=135.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--hcceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcCcchHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSV--LQFDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQILSPTVSRK  183 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~r~  183 (318)
                      +.++.+.+..++...+++.+..++|.|+++.  +|+++.+++...+...++..++.+++|+++|| +|+|+.+       
T Consensus        10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l-------   82 (475)
T TIGR00924        10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM-------   82 (475)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH-------
Confidence            4466677777778899999999999999887  89999999999999999999999999999999 8999977       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc----chhhHHHHHHHHHHHHHhHhh
Q psy4758         184 MWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN----FAGTLMGFTNGCANIASILGP  259 (318)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~g~~~~~  259 (318)
                         ..+.++..++.+++...++.........+.+.+. +...+.......+..|+    +|+++.++.+...++|..+||
T Consensus        83 ---~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~-g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~  158 (475)
T TIGR00924        83 ---VLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGS-GLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISP  158 (475)
T ss_pred             ---HHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhcc-ccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHH
Confidence               6777777777777776554332333333333332 33444555555555543    388899999999999999999


Q ss_pred             hhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         260 LFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       260 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      .+.+++.+.    .+|+..|.+.++..+++.+.....+
T Consensus       159 ~l~g~l~~~----~g~~~~f~~~~~~~~~~~l~~~~~~  192 (475)
T TIGR00924       159 LLAGVIAEN----YGYHVGFNLAAVGMVIGLLTFFAGR  192 (475)
T ss_pred             HHHHHHHHh----cChHHHHHHHHHHHHHHHHHHHHcc
Confidence            999999887    6899999888876666655544433

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>KOG2615|consensus

Probab=99.67  E-value=7.9e-16  Score=123.74  Aligned_cols=256  Identities=16%  Similarity=0.075  Sum_probs=150.4

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC-CCCchHHHHHHHHH----HHHHHHHHHHHhcCCCCCCCCCC
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS-PWGWPSIFYVSGAV----AIVWAAAWCYIGANSPAQHPFIS   75 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-~~gWr~~f~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~   75 (318)
                      ++|.+++|+|++.++.+.+.+++|.++||.+|+++.+. ...=+.+|.....+    .........+++||+-+.+++. 
T Consensus       145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~-  223 (451)
T KOG2615|consen  145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRN-  223 (451)
T ss_pred             HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhc-
Confidence            46899999999999999999999999999999999881 01112233332222    2221233555678874433322 


Q ss_pred             hhHhhhhhhccCccccccccCCcchhhhhcchh-------HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhh
Q psy4758          76 LEERIYIETSLVHSSTVSSSMKVPWKAILTSLP-------VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFL  148 (318)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~  148 (318)
                       ++.....+...+++...+.....--..+||+.       ...+.+.++.+...+.....+.+.+..+.+|+++.+.|.+
T Consensus       224 -~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~v  302 (451)
T KOG2615|consen  224 -DEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKV  302 (451)
T ss_pred             -ccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheee
Confidence             11111111111110000001111112233432       1223333444444444444444545466799999999999


Q ss_pred             chHHHHHHHHHHHHHHHhHHHHh--hhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccc
Q psy4758         149 SAAPYLAQWILILVFSWLADYIV--AKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYT  226 (318)
Q Consensus       149 ~~~~~~~~~~~~~~~g~l~dr~g--~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (318)
                      .+..++.+.+......+..||..  .+-.+          ...+.++.-.++++........+.. ...+-.+......+
T Consensus       303 l~~tGl~m~~~ql~~~~~l~~~~~~~~a~l----------~~~l~~~vP~~llls~~~~~~~l~~-~s~l~sf~~A~~vt  371 (451)
T KOG2615|consen  303 LSTTGLLMLVIQLALVPILPRYKGNIKAVL----------LFSLLLIVPAFLLLSLARTPVVLYL-GSTLKSFSTASVVT  371 (451)
T ss_pred             eehhhHHHHHHHHhccccccccccchhhHH----------HHHHHHHHHHHHHHhccccchhhhH-HHHHHHHHHHHhhH
Confidence            99988888887777777777665  22221          3344444444555555544442333 33333344445556


Q ss_pred             cccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         227 GFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       227 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      ..........|++ ||+..|+..+.+.++-++||.+.|.+..+.
T Consensus       372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws  415 (451)
T KOG2615|consen  372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS  415 (451)
T ss_pred             HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence            6666666777766 999999999999999999999999988764

>TIGR00788 fbt folate/biopterin transporter

Probab=99.67  E-value=4.1e-16  Score=135.66  Aligned_cols=254  Identities=9%  Similarity=-0.008  Sum_probs=149.4

Q ss_pred             CccCCCCCchh---HHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCChh
Q psy4758           2 SKWAPPMERAR---LFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPA-QHPFISLE   77 (318)
Q Consensus         2 ~~~~~~~~r~~---~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   77 (318)
                      .|..+ +++..   ..+......++|.++++.+++.+.+. .+||..|++.+.+.++. .+...+++|++. ..++..++
T Consensus       146 ~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~-~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~~  222 (468)
T TIGR00788       146 SERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK-TLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPRIGTY  222 (468)
T ss_pred             hhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh-cCcchHHHHHHHHHHHH-HHHHHhccccccccccccccc
Confidence            35555 44433   33444444568999999999999988 89999999998888776 445566777541 11110000


Q ss_pred             HhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHH-HHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHH
Q psy4758          78 ERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLC-QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQ  156 (318)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~  156 (318)
                      +...............++.....++.+++|.++...+..++ +.........+ -.+.++..|+++.+.|......+++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~-f~~~~~~lG~s~~~~G~~~~~~~v~~  301 (468)
T TIGR00788       223 LEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSV-FCATTQCLPGGPSFSGMSKVVGNLGS  301 (468)
T ss_pred             chhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCcee-EEEEcccCCCCcchhhhHHHHHHHHH
Confidence            00000000000000001111234456778888776555555 22111111111 11333458999999999999999999


Q ss_pred             HHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc----------CchhHHHHHHHHHHHHHhhhccc
Q psy4758         157 WILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV----------GDNLVGAITCLTLAIAINAGTYT  226 (318)
Q Consensus       157 ~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  226 (318)
                      +++....+++.+|++.|+.+          .++.++.+++.......          ++........++...+......+
T Consensus       302 i~g~~~~~~~~~~~~~r~~l----------~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~  371 (468)
T TIGR00788       302 LCGVGGYDRFLKTFPYRLLF----------GVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMP  371 (468)
T ss_pred             HHHHHHHHHHHhhCCHHHHH----------HHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHcc
Confidence            99999999999999988865          45555555444322111          11111222223333333333333


Q ss_pred             cccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758         227 GFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT  270 (318)
Q Consensus       227 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  270 (318)
                      . ..+..+..|++ +|+..++.+++.++|..+++.+++.+.+..+
T Consensus       372 ~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g  415 (468)
T TIGR00788       372 F-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG  415 (468)
T ss_pred             H-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            3 44555555555 9999999999999999999999999988744

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.67  E-value=3e-15  Score=131.43  Aligned_cols=179  Identities=15%  Similarity=0.161  Sum_probs=130.7

Q ss_pred             hhhcch-hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcCcchH
Q psy4758         102 AILTSL-PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQILSPT  179 (318)
Q Consensus       102 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~  179 (318)
                      +.+++| .++..++..++..++++.+..++|.|+++.+|++..+++..............+++|+++|| +|+|+.+   
T Consensus        15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~---   91 (500)
T PRK09584         15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI---   91 (500)
T ss_pred             hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH---
Confidence            456776 48888888889999999999999999988899999888877776665555556789999999 5999876   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccc---hhhHHHHHHHHHHHHH
Q psy4758         180 VSRKMWNTIGLWGSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF---AGTLMGFTNGCANIAS  255 (318)
Q Consensus       180 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~g~  255 (318)
                             ..+.++..++..++.+..+... ........+.+. +...+.......+.+|++   +..+.++.+...++|.
T Consensus        92 -------~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~-g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~  163 (500)
T PRK09584         92 -------MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGN-GLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGS  163 (500)
T ss_pred             -------HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhh-hcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHH
Confidence                   5666666766666665443332 222233333333 333445555566666543   4567888899999999


Q ss_pred             hHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758         256 ILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLI  295 (318)
Q Consensus       256 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
                      .++|.+.|++.|.    .+|+..|.+.++..+++.+....
T Consensus       164 ~~gp~i~g~l~~~----~g~~~~F~i~~i~~~i~~i~~~~  199 (500)
T PRK09584        164 FFSMLATPWLAAK----YGWSVAFALSVVGMLITVVNFAF  199 (500)
T ss_pred             HHHHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987    78999999887766666554443

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.67  E-value=2.8e-15  Score=129.88  Aligned_cols=171  Identities=17%  Similarity=0.152  Sum_probs=128.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      +.++...+.+++.......+..++|.+.++ +|+|+.+.+++.+...++..++.++.|++.||+|+|+.+          
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~----------   91 (434)
T PRK11663         23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM----------   91 (434)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH----------
Confidence            334444555555555556777888988887 999999999999999999999999999999999999876          


Q ss_pred             HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      .++.++..++.++....++...+....++.+.+. +...+.......+.+|++ |++++|+.+...++|..++|.+.+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~-g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l  170 (434)
T PRK11663         92 GIGLIATGIINILFGFSSSLWAFALLWVLNAFFQ-GWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI  170 (434)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6677777777777766655443333333334333 333455555666767655 99999999999999999999999999


Q ss_pred             eccCCCccchHHHHHHHHHHHHHHHHHH
Q psy4758         266 VTDNTSVSQWQTIFLIAAAIFFFGNLIF  293 (318)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (318)
                      .+.    .+|+..|.+.+++.++..+..
T Consensus       171 ~~~----~gw~~~f~~~~i~~~~~~~~~  194 (434)
T PRK11663        171 ALH----YGWRYGMMIAGIIAIVVGLFL  194 (434)
T ss_pred             HHc----ccHHHHHHHHHHHHHHHHHHH
Confidence            887    789999988877655544433

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.66  E-value=5.7e-16  Score=126.59  Aligned_cols=180  Identities=18%  Similarity=0.153  Sum_probs=145.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      +.+....+.+..++..-..+..-.|...++ .++|..|.|.+.+...+..-++.++.|.++||.+.|+.+          
T Consensus        29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm----------   97 (448)
T COG2271          29 QIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM----------   97 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee----------
Confidence            445556666666677777777778877777 789999999999999999999999999999999999987          


Q ss_pred             HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhh--h
Q psy4758         187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFV--G  263 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~--g  263 (318)
                      ..+++++++..+++.+.++.. +...+..+...+.+...+.....+...+|++ ||+..++.|...|+|+++.|.+.  +
T Consensus        98 ~~gLilsai~nil~Gfs~s~~-~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la  176 (448)
T COG2271          98 AFGLILSAIVNILFGFSPSLF-LFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLA  176 (448)
T ss_pred             hHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence            789999999999999887544 4444455555555555555555555555555 99999999999999999999999  8


Q ss_pred             eeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy4758         264 FIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ  302 (318)
Q Consensus       264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (318)
                      .+.++    .+|+..|++-+++.++..++.+...|.+++
T Consensus       177 ~~~~~----~~w~~~f~~pgiiaiival~~~~~~rd~Pq  211 (448)
T COG2271         177 FFAFH----GGWRAAFYFPGIIAIIVALILLFLLRDRPQ  211 (448)
T ss_pred             HHHhc----cchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            88887    799999999999988888777777665544

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.66  E-value=2.2e-14  Score=123.25  Aligned_cols=280  Identities=14%  Similarity=0.058  Sum_probs=179.9

Q ss_pred             CCccCCCCCc--hhHHHHHHhhHhhHHHhHHHHHHHHh--CC------------CCCchHHHHHHHHHHHHHHHHHHHHh
Q psy4758           1 MSKWAPPMER--ARLFSFAFSGTQFGNLVTLPVAGLLA--GS------------PWGWPSIFYVSGAVAIVWAAAWCYIG   64 (318)
Q Consensus         1 i~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~~~~~l~--~~------------~~gWr~~f~~~~~~~~~~~~~~~~~~   64 (318)
                      ++|.+|+++|  +.+.++.+...++|.++|+.+++...  +.            ..+.|..|++.++..++..++..+..
T Consensus       139 iaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v  218 (477)
T TIGR01301       139 LADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAV  218 (477)
T ss_pred             cccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeee
Confidence            5789998765  68999999999999999999998752  11            01679999999888888888888888


Q ss_pred             cCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcc-----hhHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hh
Q psy4758          65 ANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTS-----LPVWAVLITHLCQNWGYWTLLTEMPSYINS-VL  138 (318)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~  138 (318)
                      ||.|...++..++++      .+++++  ......+++++++     |.++.+++..++..++++.+..|.+.|.-+ .+
T Consensus       219 ~E~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~  290 (477)
T TIGR01301       219 KENPLIGSDDFINSE------AAPPSK--HGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVY  290 (477)
T ss_pred             eccCCCccccchhhh------cccccc--cchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHc
Confidence            887642211110000      000000  1112234555443     778999999999999999999999998864 45


Q ss_pred             cceeec------h---h-hhchHHHHHHHHHHHHHHHhHHHHhhh-cCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc--
Q psy4758         139 QFDIKS------N---G-FLSAAPYLAQWILILVFSWLADYIVAK-QILSPTVSRKMWNTIGLWGSAAALVGLSFVGD--  205 (318)
Q Consensus       139 g~~~~~------~---~-~~~~~~~~~~~~~~~~~g~l~dr~g~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--  205 (318)
                      +-++.+      .   | +......+...+.+++..++.+|+|+| +..          .++.++.++++....+..+  
T Consensus       291 ~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~----------~~s~~~~~~~l~~~~~i~~~~  360 (477)
T TIGR01301       291 GGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLW----------GIVNIILAICLAATVLVTYVA  360 (477)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH----------HHHHHHHHHHHHHHHHHHhhh
Confidence            433221      1   2 223334445556667778888888854 432          4555555665555543321  


Q ss_pred             -------------------hhHHHHHHHHHHHHHhhhccccccccccccCc--cchhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758         206 -------------------NLVGAITCLTLAIAINAGTYTGFLSNHLDLSP--NFAGTLMGFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       206 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~~~~~~g~  264 (318)
                                         ..........+|..........+.....+..+  ++.|..+|+.|.+..+.+.+.....|.
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~  440 (477)
T TIGR01301       361 KNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGP  440 (477)
T ss_pred             hccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence                               02133444445555555444444444444443  337999999999999999999988888


Q ss_pred             eeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         265 IVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      +.+..++  +-..++.+.++..+++.++..+..++.
T Consensus       441 ~~~~~g~--~~~~~~~~~gv~~~~aa~~~~~~~~~~  474 (477)
T TIGR01301       441 WDQLFGG--GNLPAFVVGAVAAFVSGLLALILLPRP  474 (477)
T ss_pred             HHHHcCC--CCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence            6555443  235577778888888887777665443

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.65  E-value=2.4e-14  Score=117.54  Aligned_cols=271  Identities=15%  Similarity=0.151  Sum_probs=185.3

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHH---HHHHHHHHHHHHHHHhcCCCCCCCCCChhH
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYV---SGAVAIVWAAAWCYIGANSPAQHPFISLEE   78 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (318)
                      +|..|+|+|+++.++.....-+|.+++..+.+.+.+. +.-.-..-+   .+++.++..++..+ -.|++.++....+++
T Consensus       115 ~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~-~s~~rL~~v~~~~a~i~~~l~~ia~w-g~E~r~~~~~~~~~~  192 (403)
T PF03209_consen  115 ADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP-FSPERLIQVIQGVALIALLLNLIALW-GQEPRRSRRAAAAER  192 (403)
T ss_pred             HhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc-cCHHHHHHHHHHHHHHHHHHHHHHHH-hcccCCcccccCCCC
Confidence            6889999999999999999999999999999988886 543222222   22223322222222 223222211100000


Q ss_pred             hhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758          79 RIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI  158 (318)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~  158 (318)
                      +             +......++++..+|+...+....+....+++.-...+-+|--+++|++..++..+....+.+..+
T Consensus       193 ~-------------~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~  259 (403)
T PF03209_consen  193 P-------------RPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLL  259 (403)
T ss_pred             C-------------CccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHH
Confidence            0             033345677788889988888888888888888888899999999999999999999999999999


Q ss_pred             HHHHHHHhHH-HHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH---HhcCchhHHHHHHHHHHHHHhhhccccccccccc
Q psy4758         159 LILVFSWLAD-YIVAKQILSPTVSRKMWNTIGLWGSAAALVGL---SFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLD  234 (318)
Q Consensus       159 ~~~~~g~l~d-r~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (318)
                      +-...|++.. |.++++..          .+++..+.+++.++   ....+.+.+....+.++.+.+..........+.-
T Consensus       260 G~~~~g~~l~~~~~~~~~a----------~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~l  329 (403)
T PF03209_consen  260 GMLLAGFLLSRRLGKKRTA----------ALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDL  329 (403)
T ss_pred             HHHHHHHHhcCCCCchHHH----------HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhC
Confidence            9999998777 44444432          34554444444433   3334444455555666666555555555554544


Q ss_pred             cCccchhhHHHHHHHHHHHHHhHhhhhhheeeccC----C--CccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         235 LSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDN----T--SVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       235 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      ..+++.|..+|.....+.+...++..++|.+.|..    +  ...+|..+|.+-++..++++.+...+.
T Consensus       330 t~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l~  398 (403)
T PF03209_consen  330 TSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRLD  398 (403)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            45666999999999999999999999999888751    2  346788888888887777766665443

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG0254|consensus

Probab=99.65  E-value=3.1e-15  Score=132.16  Aligned_cols=274  Identities=16%  Similarity=0.081  Sum_probs=169.5

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CChhHh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPF-ISLEER   79 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   79 (318)
                      ++|..|++.||...+..+....+|..++..++....+...+||..+.+..+.+++..+. .+++||+|+.--+ -+.++.
T Consensus       167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a  245 (513)
T KOG0254|consen  167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA  245 (513)
T ss_pred             HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH
Confidence            46889999999999999999999999995555544332148999999999988888676 8889999873211 111111


Q ss_pred             hhhhhccCc--ccc----------------ccccCCcchhhhhc----chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy4758          80 IYIETSLVH--SST----------------VSSSMKVPWKAILT----SLPVWAVLITHLCQNWGYWTLLTEMPSYINSV  137 (318)
Q Consensus        80 ~~~~~~~~~--~~~----------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~  137 (318)
                      +........  +.+                .....+..++++++    ++.++...+..+.+..+.+....|.+.+++. 
T Consensus       246 ~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-  324 (513)
T KOG0254|consen  246 KRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-  324 (513)
T ss_pred             HHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-
Confidence            111111100  000                00011112344443    3445566677777777778888899999887 


Q ss_pred             hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc---C-c-------h
Q psy4758         138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV---G-D-------N  206 (318)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---~-~-------~  206 (318)
                      .|.+... .......++..+++..++..+.||+|||+.+          +.+.....++.+++...   . .       .
T Consensus       325 ~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll----------l~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~  393 (513)
T KOG0254|consen  325 AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL----------LFGAAGMSICLVILAVVGVFALYYPNSSKGA  393 (513)
T ss_pred             cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHhHHHHHHHHHHHHHHHHHhccCCCcccch
Confidence            6665443 4555666778888888989999999999987          34444444444333321   1 1       1


Q ss_pred             hH-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758         207 LV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA  284 (318)
Q Consensus       207 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  284 (318)
                      .. .....++....+.....+.......|.+|.+ |+.+.++......+.+.+-......+.+.    .+....|...+.
T Consensus       394 ~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~----~~~~~~f~~f~~  469 (513)
T KOG0254|consen  394 GWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEA----LGIGGTFGYFGG  469 (513)
T ss_pred             hHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh----ccccchHHHHHH
Confidence            11 2222333333444445555556778999998 99999999999988887666555555444    122334554555


Q ss_pred             HHHHHHH
Q psy4758         285 IFFFGNL  291 (318)
Q Consensus       285 ~~~~~~~  291 (318)
                      .+.+...
T Consensus       470 ~~~~~~~  476 (513)
T KOG0254|consen  470 ICLLSLI  476 (513)
T ss_pred             HHHHHHH
Confidence            5455444

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.64  E-value=3.8e-15  Score=125.56  Aligned_cols=165  Identities=23%  Similarity=0.354  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHH
Q psy4758         114 ITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGS  193 (318)
Q Consensus       114 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~  193 (318)
                      +..++...........+|.++.+++|.++.+.+++.+...++..++.++.|+++||+|+|+.+          ..+.++.
T Consensus         3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l----------~~~~~~~   72 (352)
T PF07690_consen    3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVL----------IIGLLLF   72 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH----------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE----------eehhhhh
Confidence            455666666667777788566666999999999999999999999999999999999999965          5666666


Q ss_pred             HHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCc
Q psy4758         194 AAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSV  272 (318)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~  272 (318)
                      +++.....+.++.+......++.+.+. +...+....+..+..|+ +|++++++.+...++|..++|.+.+.+.+.    
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~----  147 (352)
T PF07690_consen   73 ALGSLLLAFASNFWLLLIARFLLGIGS-GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY----  147 (352)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----
T ss_pred             hhHHHHhhhhhhHHHHhhhcccccccc-ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc----
Confidence            666444434344443444444444443 44556666666677776 599999999999999999999999999977    


Q ss_pred             cchHHHHHHHHHHHHHHHHHH
Q psy4758         273 SQWQTIFLIAAAIFFFGNLIF  293 (318)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~  293 (318)
                      .+|+..|++.+++.++..++.
T Consensus       148 ~~~~~~~~~~~~~~~~~~il~  168 (352)
T PF07690_consen  148 FGWRWAFLISAILSLIAAILF  168 (352)
T ss_dssp             CHHCCHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhhhhhhhH
Confidence            789999999998888887653

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11462 putative transporter; Provisional

Probab=99.64  E-value=9.8e-15  Score=126.98  Aligned_cols=231  Identities=14%  Similarity=0.059  Sum_probs=136.3

Q ss_pred             CCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           7 PMERARLFSFAFSGTQFGNLVTLPVAGLLAGS------PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         7 ~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      ++||++..++...+..+|..+++.+...+.+.      ..+|+....+.++++++...+.+...+|.+++++     ++ 
T Consensus       141 ~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~-----~~-  214 (460)
T PRK11462        141 PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP-----TT-  214 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc-----cC-
Confidence            68999999999999999988887775544332      1368888888887777765555555555432211     00 


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (318)
                                   .+.+..++.+++||.++.+....++..............|.+...|.+ ...+.+.....++++++.
T Consensus       215 -------------~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~  280 (460)
T PRK11462        215 -------------TSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGS  280 (460)
T ss_pred             -------------CCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHH
Confidence                         111234667888988877766666655555444444444444434432 334455667778889999


Q ss_pred             HHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--HHHHHHHHHHHHhhhccccccccccccCc-
Q psy4758         161 LVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--GAITCLTLAIAINAGTYTGFLSNHLDLSP-  237 (318)
Q Consensus       161 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  237 (318)
                      +++++++||+++|+..          ..+..+..+...++.+.+....  .....++.+.+. +...+.......|..+ 
T Consensus       281 ~l~~~l~~r~gkk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~l~~~m~ad~~d~  349 (460)
T PRK11462        281 ALAKPLTDWKCKVTIF----------WWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLH-QLVTPIQWVMMSDTVDY  349 (460)
T ss_pred             HHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHhh
Confidence            9999999999998754          2222222222222222222221  222222233332 2222322333444433 


Q ss_pred             ------cc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         238 ------NF-AGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       238 ------~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                            ++ .|...+..+....+|.++++.+.|.+.+.
T Consensus       350 ~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~  387 (460)
T PRK11462        350 GEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY  387 (460)
T ss_pred             hHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  22 45556777788999999999998888765

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.62  E-value=1.1e-14  Score=127.19  Aligned_cols=175  Identities=14%  Similarity=0.118  Sum_probs=132.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcCcchHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQILSPTVSRKMW  185 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~r~~~  185 (318)
                      |.++..++..+...+++|.+..+++.|+++.+|++..+++...........+..+++|+++|| +||||.+         
T Consensus        14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~---------   84 (489)
T PRK10207         14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI---------   84 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH---------
Confidence            557777778888899999999999999999899999999888888887888888899999999 9999987         


Q ss_pred             HHHHHHHHHHHHHHHHhcCchhHHH-HHHHHHHHHHhhhccccccccccccCccc---hhhHHHHHHHHHHHHHhHhhhh
Q psy4758         186 NTIGLWGSAAALVGLSFVGDNLVGA-ITCLTLAIAINAGTYTGFLSNHLDLSPNF---AGTLMGFTNGCANIASILGPLF  261 (318)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~g~~~~~~~  261 (318)
                       ..+.++..++.+.+....+..... ......+.+ .+...+.......+.+|++   |+.+.++.+...++|..++|.+
T Consensus        85 -~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig-~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l  162 (489)
T PRK10207         85 -VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVG-NGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL  162 (489)
T ss_pred             -HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc-cccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH
Confidence             677777777777666654433222 333333333 3334445556666666544   4778999999999999999999


Q ss_pred             hheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         262 VGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       262 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      .+++.++    .+|+..|++.++..+++.+.....
T Consensus       163 ~g~l~~~----~gw~~~F~i~~i~~~~~~~~~~~~  193 (489)
T PRK10207        163 APVIADK----FGYSVTYNLCGAGLIIALLVYFAC  193 (489)
T ss_pred             HHHHHHh----hChHHHHHHHHHHHHHHHHHHHHc
Confidence            9999988    689999988766555444444443

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.62  E-value=1.1e-14  Score=124.79  Aligned_cols=170  Identities=12%  Similarity=0.160  Sum_probs=130.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHH
Q psy4758         110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIG  189 (318)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~  189 (318)
                      +......++...+.+....++|.|++++.|+|+.+.|+..+...+...+..++.|+++||+|+|+.+          ..+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l----------~~~   82 (400)
T PRK11646         13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMI----------VTG   82 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHH----------HHH
Confidence            4455677788888888899999999888999999999999999999999999999999999999876          667


Q ss_pred             HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc-cchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         190 LWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP-NFAGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      .++..++.+.....++.+...+..++.+.+. +...+.......+..| ++|+++.|+.+...++|..+||.+.+++. .
T Consensus        83 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~  160 (400)
T PRK11646         83 MLMRAAGFATMAIAHEPWLLWLSCILSGLGG-TLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q  160 (400)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence            7777777777766655443444444444443 2333444445555554 45999999999999999999999999998 4


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758         269 NTSVSQWQTIFLIAAAIFFFGNLIFLI  295 (318)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
                          .+|+..|++.+...++..++...
T Consensus       161 ----~g~~~~f~~~~~~~~~~~i~~~~  183 (400)
T PRK11646        161 ----YDFRLVCATGAVLFVLAAAFNAW  183 (400)
T ss_pred             ----hhHHHHHHHHHHHHHHHHHHHHH
Confidence                57899998887776665544433

>PRK03699 putative transporter; Provisional

Probab=99.61  E-value=4.3e-14  Score=121.04  Aligned_cols=173  Identities=14%  Similarity=0.157  Sum_probs=125.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      +-++...+..++...........+|.+.++ +|+|..+.++..+...++..++.++.|++.||+|+|+.+          
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~----------   75 (394)
T PRK03699          7 KLTWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL----------   75 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH----------
Confidence            334555555666556666677778887766 899999999999999999999999999999999999976          


Q ss_pred             HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      ..+.++..++..+..+.++.....+..++.+.+... ..+.......+..|++ |+.+.+..+....+++.++|.+.+.+
T Consensus        76 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l  154 (394)
T PRK03699         76 IFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGI-TMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL  154 (394)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHh-hccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            556666666666666655544333344444444333 3344445556666765 99999998888899999999998887


Q ss_pred             eccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      .+..   .+|+..|...+++.++..++.+
T Consensus       155 ~~~~---~gw~~~f~~~~~~~~~~~~~~~  180 (394)
T PRK03699        155 LARS---IEWYWVYACIGLVYVAIFILTL  180 (394)
T ss_pred             Hhcc---ccHHHHHHHHHHHHHHHHHHHH
Confidence            6542   6899999887777666554443

>PRK10504 putative transporter; Provisional

Probab=99.61  E-value=1.6e-14  Score=126.77  Aligned_cols=176  Identities=17%  Similarity=0.195  Sum_probs=133.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      +.+|...+..++.....+.+..++|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+          
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~----------   78 (471)
T PRK10504         10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF----------   78 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH----------
Confidence            457777888888888888888999999987 999999999998888899999999999999999999876          


Q ss_pred             HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      ..+..+..++.+.....++...+....++.+.+... ..+.......+..|++ |+++.|+.+...++|..++|.+.+.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l  157 (471)
T PRK10504         79 FTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAM-MVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL  157 (471)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            455555555555555555444344444444444433 3344445555666655 99999999999999999999999999


Q ss_pred             eccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      .+.    .+|+..|.+......++.+......+
T Consensus       158 ~~~----~gw~~~f~~~~~~~~l~~~~~~~~~~  186 (471)
T PRK10504        158 VEY----ASWHWIFLINIPVGIIGAIATLMLMP  186 (471)
T ss_pred             Hhh----ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            987    68999999887776666655554433

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.61  E-value=7.9e-15  Score=126.58  Aligned_cols=184  Identities=18%  Similarity=0.107  Sum_probs=129.9

Q ss_pred             cchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcc
Q psy4758          98 VPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILS  177 (318)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~  177 (318)
                      .+++.+.|+|.+....+..++...+........|.+.++ .+.++.+.|...+...++..+++++.|+++||++||+.+.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~   86 (417)
T PRK10489          8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL   86 (417)
T ss_pred             HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE
Confidence            445556678888888888888888877788888988877 7789999999999999999999999999999999999873


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH---h--cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHH
Q psy4758         178 PTVSRKMWNTIGLWGSAAALVGLS---F--VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCA  251 (318)
Q Consensus       178 ~~~~r~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~  251 (318)
                                .+..+.+++.....   +  .++........+..+.+.. ...+.......+..|++ |+++.++.+...
T Consensus        87 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (417)
T PRK10489         87 ----------LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGS-LGVTALLAATPALVGRENLMQAGAITMLTV  155 (417)
T ss_pred             ----------ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH-HHHHHHhhhhhhccCHHHHHHHHHHHHHHH
Confidence                      33333333332221   1  1222223333333333322 23334444455555554 999999999999


Q ss_pred             HHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         252 NIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       252 ~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      ++|..+||.+.+.+.+.    .+|++.+.+.++..++..+.....+
T Consensus       156 ~~g~~~g~~l~g~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~  197 (417)
T PRK10489        156 RLGSVISPALGGLLIAA----GGVAWNYGLAAAGTFITLLPLLRLP  197 (417)
T ss_pred             hHHHHhHHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999887    6788888877776666655544443

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.61  E-value=1.9e-14  Score=126.01  Aligned_cols=170  Identities=13%  Similarity=0.130  Sum_probs=114.8

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHH
Q psy4758         116 HLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAA  195 (318)
Q Consensus       116 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~  195 (318)
                      .++.....+....+.|.+.++ +|++..+.+...+...++..++.++.|+++||+|+|+.+          ..+.++..+
T Consensus        45 ~~~~~~~~~~~~~~~~~l~~~-~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~----------~~~~~~~~~  113 (476)
T PLN00028         45 FFTCFVSTFAAAPLLPIIRDN-LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS----------AFLLMLTAP  113 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------HHHHHHHHH
Confidence            333344444445555655555 999999999988888889999999999999999999865          556666666


Q ss_pred             HHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeecc-----C
Q psy4758         196 ALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTD-----N  269 (318)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~  269 (318)
                      +.++..+.++...+.+..++.+.+.... .+ ......+..|++ ||+++|+.+...++|+.+++.+.+.+.+.     .
T Consensus       114 ~~~~~~~~~s~~~l~~~r~l~G~~~~~~-~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~  191 (476)
T PLN00028        114 AVFCMSLVSSATGFIAVRFFIGFSLATF-VS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA  191 (476)
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHHhh-HH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            6666666655443434444455444322 22 233455666655 99999999988888888887776554321     0


Q ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         270 TSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      .+..+|+..|++.+++.++..+...++.+
T Consensus       192 ~~~~gWr~~f~i~g~l~l~~~l~~~~~~~  220 (476)
T PLN00028        192 PSFTAWRIAFFVPGLLHIIMGILVLTLGQ  220 (476)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence            11248999999988887776666555543

>KOG0252|consensus

Probab=99.61  E-value=3.2e-16  Score=128.95  Aligned_cols=292  Identities=13%  Similarity=0.100  Sum_probs=190.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC---C-----------CCCchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG---S-----------PWGWPSIFYVSGAVAIVWAAAWCYIGANS   67 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~---~-----------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~   67 (318)
                      +|...+++||...+...+..+.|...|.+++-.+..   .           +.-||..|.+.+++++.+ +.....+||+
T Consensus       170 SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~-ly~Rl~M~Et  248 (538)
T KOG0252|consen  170 SESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLV-LYFRLKMPET  248 (538)
T ss_pred             hhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHH-HHhhhcCCcc
Confidence            577788999999999999999998888877765543   1           124999999888777764 4445567887


Q ss_pred             CCCCCC--CChh-----HhhhhhhccCcccccc---ccCCcc---hhhhhcc---hhHHHHHHHHHHHHHHHHHHHhhhh
Q psy4758          68 PAQHPF--ISLE-----ERIYIETSLVHSSTVS---SSMKVP---WKAILTS---LPVWAVLITHLCQNWGYWTLLTEMP  131 (318)
Q Consensus        68 ~~~~~~--~~~~-----~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p  131 (318)
                      ++-..-  .+.+     .++......++++...   +.++..   +...+..   +..+..+..+|+.-.++|....+..
T Consensus       249 ~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s  328 (538)
T KOG0252|consen  249 ARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQS  328 (538)
T ss_pred             hhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHH
Confidence            652200  0000     0000000011110000   111111   2222222   4566777888888999999999999


Q ss_pred             hhhhhhhcceeechhh--------hchHHH-HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4758         132 SYINSVLQFDIKSNGF--------LSAAPY-LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF  202 (318)
Q Consensus       132 ~~l~~~~g~~~~~~~~--------~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~  202 (318)
                      ..+++ .|+.+.+...        ...+.. .+.+.|..+...++|++||++..          +.++++..+..+.+..
T Consensus       329 ~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq----------~~GF~~~~i~~~~~~~  397 (538)
T KOG0252|consen  329 VIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQ----------LMGFFIMTIFFFVIAG  397 (538)
T ss_pred             HHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHH----------HhhHHHHHHHHHHHcC
Confidence            98887 6776554433        111222 22344666677789999999876          6778888777777665


Q ss_pred             cCchhH----HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC-CCccchH
Q psy4758         203 VGDNLV----GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN-TSVSQWQ  276 (318)
Q Consensus       203 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~  276 (318)
                      ..++..    ..+...+..++...+.......+..|.+|.+ |++..|+....+-.|+.++.....++.++. ....+.+
T Consensus       398 ~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~  477 (538)
T KOG0252|consen  398 PYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVR  477 (538)
T ss_pred             CcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccch
Confidence            544211    2222233333334455566777888999999 999999999999999999999999998832 1126789


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccccCCCC
Q psy4758         277 TIFLIAAAIFFFGNLIFLIFGTSEVQPWN  305 (318)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (318)
                      .++++.+++++++.+..+++++.+++..+
T Consensus       478 ~v~~i~~~~~~~gi~~T~l~pEtk~~~le  506 (538)
T KOG0252|consen  478 NVFIILAGCMLLGILFTLLIPETKGKSLE  506 (538)
T ss_pred             HHHHHHHHHHHHhHheeEEeecccccCHH
Confidence            99999999999999998888865555443

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.61  E-value=1.1e-14  Score=125.92  Aligned_cols=182  Identities=9%  Similarity=0.046  Sum_probs=120.8

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHH
Q psy4758         102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVS  181 (318)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  181 (318)
                      +.+++|++|...+..++...+......++|.|+++++|+++.+.|...+...++..+++++.|+++||+|+|+.+     
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~-----   79 (420)
T PRK09528          5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHL-----   79 (420)
T ss_pred             hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-----
Confidence            456789999999999999988888999999999998999999999999999999999999999999999999865     


Q ss_pred             HHHHHHHHHHHHHHHHH---HHHhcCchhHHHHHHHHHHHHHhhhcccccccccccc---CccchhhHHHHHHHHHHHHH
Q psy4758         182 RKMWNTIGLWGSAAALV---GLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDL---SPNFAGTLMGFTNGCANIAS  255 (318)
Q Consensus       182 r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~g~  255 (318)
                           .++..+..+...   .....+...........++....+...........+.   .+++++..+|......++|.
T Consensus        80 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  154 (420)
T PRK09528         80 -----LWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGW  154 (420)
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHH
Confidence                 222222222211   1111100000011111111111111111111111222   23347778888899999999


Q ss_pred             hHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         256 ILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       256 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      .++|.+.+.+.+.     +|+..|++.++..++..++.+..++
T Consensus       155 ~i~~~~~g~l~~~-----~~~~~f~~~~~~~~~~~~~~~~~~~  192 (420)
T PRK09528        155 ALCAFIAGILFNI-----NPQINFWLGSGSALILLVLLFFAKP  192 (420)
T ss_pred             HHHHHHHHHHHhc-----CchHhHHHHHHHHHHHHHHHhcccc
Confidence            9999999998764     5677888877776666655554443

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.61  E-value=3.8e-14  Score=124.80  Aligned_cols=175  Identities=15%  Similarity=0.101  Sum_probs=134.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI  188 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~  188 (318)
                      +..+++..++...-...+..-+|.+.++ +|.+..+.++..+.+.++...+.+..|+++||+|||+.+          ..
T Consensus         8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l----------~~   76 (495)
T PRK14995          8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL----------ML   76 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HH
Confidence            4455566666666666777788988777 899999999999999999999999999999999999977          67


Q ss_pred             HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc-cchhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758         189 GLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP-NFAGTLMGFTNGCANIASILGPLFVGFIVT  267 (318)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~  267 (318)
                      +..+..++.+.....++.+.+.+...+.+.+.....+........+..| ++|+++.|+.....++|..+||.+++.+.+
T Consensus        77 ~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~  156 (495)
T PRK14995         77 GGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE  156 (495)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            7777778777777776665455555556655544333333334445444 459999999999999999999999999999


Q ss_pred             cCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         268 DNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      .    .+|++.|++...+.++..++.....+
T Consensus       157 ~----~gwr~~f~i~~~~~~~~~~l~~~~l~  183 (495)
T PRK14995        157 H----FYWGSVFLINVPIVLVVMGLTARYVP  183 (495)
T ss_pred             c----CChHHHHHHHHHHHHHHHHHHHHhCC
Confidence            8    78999999888777766655554443

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.60  E-value=7.8e-15  Score=124.26  Aligned_cols=171  Identities=18%  Similarity=0.114  Sum_probs=125.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758         111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL  190 (318)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~  190 (318)
                      .+....++...+.......+|.|..+ .+.++.+.++..+...++..++.++.|+++||+|||+.+          ..+.
T Consensus         3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~----------~~~~   71 (365)
T TIGR00900         3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM----------IGAD   71 (365)
T ss_pred             ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH----------HHHH
Confidence            34556666667777777888888887 899999999999999999999999999999999999976          4454


Q ss_pred             HHHHHHHHHHHhcC-----chhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758         191 WGSAAALVGLSFVG-----DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       191 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~  264 (318)
                      ++..++..+.....     +.+......++.+.+ .+...+....+..|..|++ |+++.++.+....+|..++|.+.+.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~  150 (365)
T TIGR00900        72 LIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIA-QAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGL  150 (365)
T ss_pred             HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            44444444443333     333233334444433 3344555666667777665 9999999999999999999999999


Q ss_pred             eeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         265 IVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      +.+.    .+|+..+++.++..+++.+.....+
T Consensus       151 l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~  179 (365)
T TIGR00900       151 MYAT----LGIKWAIWVDAVGFAISALLIVSVR  179 (365)
T ss_pred             HHHH----hhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9887    6899999887776666555544443

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.60  E-value=2e-14  Score=121.98  Aligned_cols=173  Identities=17%  Similarity=0.198  Sum_probs=122.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758         108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT  187 (318)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~  187 (318)
                      .++..++..+......+....+.|.++++++|+|+.+.++..+...++..++.++.|+++||+|+|+.+          .
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~   71 (366)
T TIGR00886         2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT----------T   71 (366)
T ss_pred             chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH----------H
Confidence            456677777788888888899999877777999999999999999999999999999999999999876          6


Q ss_pred             HHHHHHHHHHHHHHhcC-chhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         188 IGLWGSAAALVGLSFVG-DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       188 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      .+.++..++.+...+.+ +.....+..++.+.+. ... .....+..+..|+ +|+++.++.....++|..+++.+.+.+
T Consensus        72 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l  149 (366)
T TIGR00886        72 LSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAG-GSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI  149 (366)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-hhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            67777777777776665 4443444444444442 222 3334455566665 499999999988888888887777665


Q ss_pred             eccC----C--CccchHHHH-HHHHHHHHHHHHH
Q psy4758         266 VTDN----T--SVSQWQTIF-LIAAAIFFFGNLI  292 (318)
Q Consensus       266 ~~~~----~--~~~~~~~~~-~~~~~~~~~~~~~  292 (318)
                      .+..    +  ...+|+..+ ...+++..+..++
T Consensus       150 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~  183 (366)
T TIGR00886       150 IGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALL  183 (366)
T ss_pred             HHHHHhcccccccccccchhHHHHHHHHHHHHHH
Confidence            5421    0  114788888 4334444333333

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.59  E-value=2e-13  Score=119.92  Aligned_cols=285  Identities=13%  Similarity=0.074  Sum_probs=150.2

Q ss_pred             CccCCCCC--chhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHH---HHHHHHhcCCCCCCCCCCh
Q psy4758           2 SKWAPPME--RARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWA---AAWCYIGANSPAQHPFISL   76 (318)
Q Consensus         2 ~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   76 (318)
                      +|++|+++  |..++++++.+.++|..++|.+++++.+. .|||+.|++.++..++..   +.....++|.+++++..+.
T Consensus       138 ~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~-~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~  216 (500)
T PRK09584        138 STCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK-YGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPI  216 (500)
T ss_pred             HHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh-hCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCcccc
Confidence            57787643  55688999999999999999999999998 899999999875444332   2233344443211111000


Q ss_pred             hHhhhhh------------h-ccCcccccc------------c--cCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhh
Q psy4758          77 EERIYIE------------T-SLVHSSTVS------------S--SMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTE  129 (318)
Q Consensus        77 ~~~~~~~------------~-~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (318)
                      +......            . .....+...            .  ......++.-+ ++.+.. +..+.....++.....
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~i~f~~~~~q  294 (500)
T PRK09584        217 NYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAAR-RKMIVA-FILMLEAIIFFVLYSQ  294 (500)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHH-HHHHHH-HHHHHHHHHHHHHHHH
Confidence            0000000            0 000000000            0  00000011112 222222 2233445556666666


Q ss_pred             hhhhhhhh--hccee------echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy4758         130 MPSYINSV--LQFDI------KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS  201 (318)
Q Consensus       130 ~p~~l~~~--~g~~~------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~  201 (318)
                      .|.++...  .+.+.      ...+.+.+...+..++..++.+++-+|.++|...      .....+++++.++++..+.
T Consensus       295 ~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~------~~~~~~G~~l~~l~f~~l~  368 (500)
T PRK09584        295 MPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPM------PHKFAIGMVLCSGAFLVLP  368 (500)
T ss_pred             hccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCc------HHHHHHHHHHHHHHHHHHH
Confidence            67665531  11221      2244555566667777777776766776655321      1123667777777776655


Q ss_pred             hcCc---------hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee-----
Q psy4758         202 FVGD---------NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV-----  266 (318)
Q Consensus       202 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~-----  266 (318)
                      ...+         .++.....++.+.+. ....+.......+..|++ ||+.+|+......+|..++..+.+...     
T Consensus       369 ~~~~~~~~~~~vs~~~~~~~~~l~~~ge-~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~  447 (500)
T PRK09584        369 LGAKFANDAGIVSVNWLIASYGLQSIGE-LMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNV  447 (500)
T ss_pred             HHHHhcCCCCccCHHHHHHHHHHHHHHH-HHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            4432         122333334444443 334455555566666766 999999887766677766666654221     


Q ss_pred             -ccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         267 -TDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       267 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                       |......++...|...++..++..++.+..
T Consensus       448 ~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~  478 (500)
T PRK09584        448 TDPLMSLEVYGRVFLQIGIATAVIAVLMLLT  478 (500)
T ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence             110011246778877777666555444443

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.59  E-value=3.5e-14  Score=117.34  Aligned_cols=177  Identities=14%  Similarity=0.070  Sum_probs=150.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      ...+.+.+..|......+.....+|+.-+| +|.|..++|.+.+.+.++..+++++...+.||+.||+.+          
T Consensus        13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL----------   81 (394)
T COG2814          13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLL----------   81 (394)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH----------
Confidence            345677788888888999999999999999 999999999999999999999999999999999999987          


Q ss_pred             HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758         187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIV  266 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~  266 (318)
                      ...+.+..++.++..+.++...+.+.-++.+...+............-++|++|++++++......++..+|.+++.++-
T Consensus        82 l~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig  161 (394)
T COG2814          82 LGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG  161 (394)
T ss_pred             HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence            77888889999999999888877777777776655544444444444445556999999999999999999999999999


Q ss_pred             ccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         267 TDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      |.    .||+.+|...+++.++..+..+...+
T Consensus       162 ~~----~GWR~~F~~ia~l~ll~~~~~~~~lP  189 (394)
T COG2814         162 QL----FGWRATFLAIAVLALLALLLLWKLLP  189 (394)
T ss_pred             HH----hhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            98    89999999999998888777666555

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.58  E-value=2.4e-14  Score=122.26  Aligned_cols=171  Identities=15%  Similarity=0.119  Sum_probs=124.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758         111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL  190 (318)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~  190 (318)
                      ......+.............|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+.+          ..+.
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~----------~~~~   77 (385)
T TIGR00710         9 LLGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL----------LLGL   77 (385)
T ss_pred             HHHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH----------HHHH
Confidence            33333444445555555666766655 999999999999999999999999999999999999876          5666


Q ss_pred             HHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         191 WGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      ++..++.+.....++........++.+.+.. ...+.......|..|++ |+++.++.+....+|..++|.+.+.+.+. 
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-  155 (385)
T TIGR00710        78 FIFALSSLGLALSNNIETLLVLRFVQAFGAS-AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-  155 (385)
T ss_pred             HHHHHHHHHHHHHccHHHHHHHHHHHHcchh-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            6666766666666554433333444443333 33445555666766655 99999999999999999999999998887 


Q ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         270 TSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                         .+|+..+++.+++.++..+......
T Consensus       156 ---~~~~~~~~~~~~~~~~~~~~~~~~~  180 (385)
T TIGR00710       156 ---LSWHAIFAFLSLAGILLSALIFFIL  180 (385)
T ss_pred             ---cCHHHHHHHHHHHHHHHHHHHHHhC
Confidence               6899999888877776665554443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>KOG0255|consensus

Probab=99.58  E-value=2.6e-13  Score=120.53  Aligned_cols=246  Identities=16%  Similarity=0.142  Sum_probs=153.2

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC-hhHh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFIS-LEER   79 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   79 (318)
                      ++|++++++|+.+..+ ......++.+++..++++..   +||+.+++..+++++..++ +++.||+|+...... .++.
T Consensus       196 ~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~a  270 (521)
T KOG0255|consen  196 VAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDEA  270 (521)
T ss_pred             heeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHHH
Confidence            3699999999999999 77888888888888888876   6999999999998876444 566669887321111 1111


Q ss_pred             hhhhhcc------Ccc--------------ccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhc
Q psy4758          80 IYIETSL------VHS--------------STVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQ  139 (318)
Q Consensus        80 ~~~~~~~------~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g  139 (318)
                      ....++.      ..+              ......++..+.++++.|++....+...+..+.+ ....+.-.+..+..|
T Consensus       271 ~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~-~~~y~gl~~~~~~lg  349 (521)
T KOG0255|consen  271 IKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF-SLVYYGLSLNVSGLG  349 (521)
T ss_pred             HHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHH-hHHHHhhhhhhhhcC
Confidence            1110000      000              0000122345677788775443333333322221 222222122222233


Q ss_pred             ceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--HHHHHHHHH
Q psy4758         140 FDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--GAITCLTLA  217 (318)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  217 (318)
                      .+.   .......+.....+....+...|+.|||...          ..+..+..++++...+......  .......++
T Consensus       350 ~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
T KOG0255|consen  350 GNI---YLNFTLSGLVELPAYFRNGLLLPEFGRRPPL----------FLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLG  416 (521)
T ss_pred             chH---HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Confidence            332   2333334446666777778999999888765          6777777777777777665443  334444445


Q ss_pred             HHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         218 IAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      .+...........+..|+.|+. |..+.+..+....+++.++|.+.-..
T Consensus       417 ~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~  465 (521)
T KOG0255|consen  417 KFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLL  465 (521)
T ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555555555588888999998 99999999999999999999987544

>PRK03545 putative arabinose transporter; Provisional

Probab=99.58  E-value=3.4e-14  Score=121.55  Aligned_cols=171  Identities=14%  Similarity=0.091  Sum_probs=124.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI  188 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~  188 (318)
                      ++.+.+..+......+.....+|.+.++ +|.++.+.++..+...++..++.+..|++.||+|||+.+          ..
T Consensus        11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~   79 (390)
T PRK03545         11 VVTLALAAFIFNTTEFVPVGLLSDIAQS-FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL----------IG   79 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHcchHHHHhH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH----------HH
Confidence            3444444444333334444556776665 999999999999999999999999999999999999976          66


Q ss_pred             HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758         189 GLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVT  267 (318)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~  267 (318)
                      +..+..++.+...+.++.+.+.+..+..+.+.. ...+.......+..|+ +|++++|+.....++|..++|.+.+.+.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~  158 (390)
T PRK03545         80 LFVLFIASHVLSALAWNFTVLLISRIGIAFAHA-IFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ  158 (390)
T ss_pred             HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            777777777777776665544444444444432 2334444555566554 59999999999999999999999999888


Q ss_pred             cCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758         268 DNTSVSQWQTIFLIAAAIFFFGNLIFLI  295 (318)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
                      .    .+|+..|++.+++.++..+....
T Consensus       159 ~----~gw~~~f~~~~~~~~l~~~~~~~  182 (390)
T PRK03545        159 Y----LGWRTTFLAIGGGALITLLLLIK  182 (390)
T ss_pred             H----hcHHHHHHHHHHHHHHHHHHHHH
Confidence            7    78999999988877766555444

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.58  E-value=3.7e-14  Score=120.97  Aligned_cols=172  Identities=10%  Similarity=0.049  Sum_probs=134.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      +.++...+..+............+|.+.++ +|.+..+.++..+...++..++.++.|++.||+|+|+.+          
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~----------   71 (382)
T PRK10091          3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL----------   71 (382)
T ss_pred             chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH----------
Confidence            456677777777777878888888887766 899999999999999999999999999999999999976          


Q ss_pred             HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      ..+..+.+++.++..+.++.+.+.+..++.+.+.... .+.......+..|++ |++++++......++..++|.+.+.+
T Consensus        72 ~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l  150 (382)
T PRK10091         72 LFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAF-FGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL  150 (382)
T ss_pred             HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHH-HHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence            6677777777777777766554555555555444332 233344555666665 99999999999999999999999998


Q ss_pred             eccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      .+.    .+|+..|.+.++..++..+...
T Consensus       151 ~~~----~gwr~~f~~~~~~~~~~~~~~~  175 (382)
T PRK10091        151 SQE----FSWRYTFLLIAVFNIAVLASIY  175 (382)
T ss_pred             hhh----ccHHHHHHHHHHHHHHHHHHHH
Confidence            887    6899999988877666554433

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.58  E-value=2.5e-14  Score=122.99  Aligned_cols=171  Identities=12%  Similarity=0.223  Sum_probs=124.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758         108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT  187 (318)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~  187 (318)
                      .+....+..+.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+          .
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~----------~   81 (405)
T TIGR00891        13 AFSAAWLGWLLDAFDFFLVALVLAEVAGE-FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM----------V   81 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------H
Confidence            34455666666666666677777766555 999999999999999999999999999999999999976          5


Q ss_pred             HHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758         188 IGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV  266 (318)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~  266 (318)
                      .+.++..++.+...+.++...+....++.+.+... ..+....+..|..|++ |+++.++.+....+|..+++.+.+.+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~  160 (405)
T TIGR00891        82 TSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGG-EYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVV  160 (405)
T ss_pred             HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhh-hhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56666666666666666554444444555554443 3344445555655554 999999999999999999999999888


Q ss_pred             ccCCCccchHHHHHHHHHHHHHHHHH
Q psy4758         267 TDNTSVSQWQTIFLIAAAIFFFGNLI  292 (318)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (318)
                      +..+  .+|+..|.+.++..++..+.
T Consensus       161 ~~~~--~~w~~~f~~~~~~~~~~~~~  184 (405)
T TIGR00891       161 PVWG--DGWRALFFISILPIIFALWL  184 (405)
T ss_pred             HhcC--ccHHHHHHHHHHHHHHHHHH
Confidence            7632  24898888765555444433

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.58  E-value=4.4e-14  Score=124.48  Aligned_cols=172  Identities=16%  Similarity=0.199  Sum_probs=131.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHH
Q psy4758         110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIG  189 (318)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~  189 (318)
                      ..+.+..+.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+          ..+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~   73 (485)
T TIGR00711         5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF----------LIS   73 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH----------HHH
Confidence            344555566666666677778888777 899999999999999999999999999999999999876          667


Q ss_pred             HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         190 LWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      .++..++.......++........++.+.+... ..+....+..+..|+ +|+++.++......+|..++|.+.+++.+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~  152 (485)
T TIGR00711        74 TFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGP-LIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN  152 (485)
T ss_pred             HHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence            777777777777666555444445555544433 344555556666665 499999999999999999999999999887


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         269 NTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                          .+|+..|++.+.+.++..++.....
T Consensus       153 ----~~w~~~f~~~~~~~~~~~~~~~~~~  177 (485)
T TIGR00711       153 ----YHWRWIFLINVPIGIIVVVVAFFIL  177 (485)
T ss_pred             ----cCceehhhhhhHHHHHHHHHHHHHc
Confidence                7899999888777666655554443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.58  E-value=5.3e-14  Score=120.48  Aligned_cols=175  Identities=16%  Similarity=0.080  Sum_probs=127.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      |-+....+..+....+.......+|.+.++ +|.+..+.+...+...++..++.++.|+++||+|||+.+          
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l----------   71 (392)
T PRK10473          3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA----------   71 (392)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH----------
Confidence            334445555556666666677788888777 899999999999999999999999999999999999876          


Q ss_pred             HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      ..+.++..++.......++........++.+.+... ..+.......+..|+ +|+++.++.+...+++..++|.+.+.+
T Consensus        72 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l  150 (392)
T PRK10473         72 IPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGC-CYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI  150 (392)
T ss_pred             HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            566666666666666655544333334444443332 233344455565554 499999999999999999999999888


Q ss_pred             eccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      .+.    .+|+..+++.+++.++..++.....
T Consensus       151 ~~~----~g~~~~~~~~~~~~~i~~~~~~~~~  178 (392)
T PRK10473        151 MLK----FPWQSLFYTMAAMGILVLLLSLFIL  178 (392)
T ss_pred             HhC----cChHHHHHHHHHHHHHHHHHHHHHc
Confidence            776    6899999888877776666554443

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.57  E-value=1.8e-14  Score=123.32  Aligned_cols=161  Identities=19%  Similarity=0.208  Sum_probs=122.0

Q ss_pred             HHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy4758         121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL  200 (318)
Q Consensus       121 ~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~  200 (318)
                      .....+....|. +++++|.++.+.+++.+...++..++.++.|+++||+|||+.+          ..+.++..++....
T Consensus         8 ~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~----------~~~~~~~~~~~~~~   76 (399)
T TIGR00893         8 LDRANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL----------AVFIVIWGVFTGLQ   76 (399)
T ss_pred             HHHHhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee----------HHHHHHHHHHHHHH
Confidence            333444455565 4455999999999999999999999999999999999999987          56666667766666


Q ss_pred             HhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHH
Q psy4758         201 SFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIF  279 (318)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~  279 (318)
                      ...++.....+..++.+.+. +...+....+..|..|++ |++++++.+...++|..++|.+.+.+.+.    .+|+..|
T Consensus        77 ~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~~~  151 (399)
T TIGR00893        77 AFAGAYVSLYILRVLLGAAE-APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH----FSWQWAF  151 (399)
T ss_pred             HHHcCHHHHHHHHHHHHHHH-HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh----CCchHHH
Confidence            66665544444445555553 334556666677777765 99999999999999999999999998887    6799999


Q ss_pred             HHHHHHHHHHHHHHHhhc
Q psy4758         280 LIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~  297 (318)
                      .+.+++.++..+......
T Consensus       152 ~~~~~~~~~~~~~~~~~~  169 (399)
T TIGR00893       152 IIEGVLGIIWGVLWLKFI  169 (399)
T ss_pred             HHHHHHHHHHHHHhhhee
Confidence            888777666655554433

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.57  E-value=5.8e-14  Score=120.06  Aligned_cols=157  Identities=12%  Similarity=0.065  Sum_probs=119.8

Q ss_pred             HHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758         120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG  199 (318)
Q Consensus       120 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~  199 (318)
                      ....+.....+|.+.++ +|.++.+.+...+...++..++.++.|++.||+|||+.+          ..+.++.+++.+.
T Consensus        33 ~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~----------~~~~~~~~~~~~~  101 (394)
T PRK10213         33 IIVEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVV----------ILFAVLLTLSCLL  101 (394)
T ss_pred             HHHHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHH----------HHHHHHHHHHHHH
Confidence            33334445567777666 899999999999999999999999999999999999976          6677777777777


Q ss_pred             HHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHH
Q psy4758         200 LSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTI  278 (318)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~  278 (318)
                      ....++.+.+.+..++.+.+.+. ..+.......+..|++ |+++.++.....+++..++|.+.+.+.+.    .+|+..
T Consensus       102 ~~~~~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~----~gw~~~  176 (394)
T PRK10213        102 VSFANSFSLLLIGRACLGLALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL----IGWRNV  176 (394)
T ss_pred             HHHHChHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCHHHH
Confidence            66665555455555555555444 3445555556667655 99999999999999999999999999887    789999


Q ss_pred             HHHHHHHHHHHHHH
Q psy4758         279 FLIAAAIFFFGNLI  292 (318)
Q Consensus       279 ~~~~~~~~~~~~~~  292 (318)
                      |++.+++.++..+.
T Consensus       177 f~~~~~l~~~~~l~  190 (394)
T PRK10213        177 FNAAAVMGVLCIFW  190 (394)
T ss_pred             HHHHHHHHHHHHHH
Confidence            98887666554433

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.57  E-value=3e-14  Score=121.19  Aligned_cols=163  Identities=11%  Similarity=0.049  Sum_probs=119.1

Q ss_pred             HHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH
Q psy4758         119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV  198 (318)
Q Consensus       119 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~  198 (318)
                      .....+......|.+.++ +|.+..+.+...+...++..++.++.|+++||+|||+.+          ..+.++..++.+
T Consensus        15 ~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~----------~~~~~~~~~~~~   83 (377)
T TIGR00890        15 TSGYVYTWTLLAPPLGRY-FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVA----------MLGGILYGLGFT   83 (377)
T ss_pred             HhhHHhhhhhHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchh----------HHhHHHHHHHHH
Confidence            333355555666666555 999999999999999999999999999999999999987          667777777777


Q ss_pred             HHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHH
Q psy4758         199 GLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTI  278 (318)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~  278 (318)
                      .....++.........+.+.+... ..+.......+.+|++|+++.++.....++|..+++.+.+.+.+.    .+|+..
T Consensus        84 ~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~  158 (377)
T TIGR00890        84 FYAIADSLAALYLTYGLASAGVGI-AYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINL----EGVPAA  158 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHH-HHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhc----ccHHHH
Confidence            776665544343444444444332 233333445566788899999999999999988877777777666    689999


Q ss_pred             HHHHHHHHHHHHHHHHhhc
Q psy4758         279 FLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~  297 (318)
                      |++.+++.++..+......
T Consensus       159 f~~~~~~~~~~~~~~~~~~  177 (377)
T TIGR00890       159 FIYMGIIFLLVIVLGAFLI  177 (377)
T ss_pred             HHHHHHHHHHHHHHHHHhe
Confidence            9988887777665554443

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.57  E-value=7.9e-14  Score=120.03  Aligned_cols=170  Identities=14%  Similarity=0.117  Sum_probs=123.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHH
Q psy4758         110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIG  189 (318)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~  189 (318)
                      .......+.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|+|+.+          ..+
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~   86 (406)
T PRK11551         18 GLCFLVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL----------IVS   86 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH----------HHH
Confidence            334445555555566666777777766 899999999999999999999999999999999999987          555


Q ss_pred             HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         190 LWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      .++..++.+.....++.....+..++.+.+... ..+.......|..|+ +|++++++.+....+|..+++.+.+.+.+.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~  165 (406)
T PRK11551         87 VALFGLFSLATAQAWDFPSLLVARLLTGVGLGG-ALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD  165 (406)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            556666655565555544344444444444333 344555566666665 499999999999999999999998887776


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758         269 NTSVSQWQTIFLIAAAIFFFGNLIFLI  295 (318)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
                          .+|+..|++.+++.++..+....
T Consensus       166 ----~~~~~~~~~~~~~~~~~~~~~~~  188 (406)
T PRK11551        166 ----AAWRHIFYVGGVGPLLLVPLLMR  188 (406)
T ss_pred             ----cCHHHHHHHHHHHHHHHHHHHHH
Confidence                68999998877665555544443

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.56  E-value=7e-14  Score=119.87  Aligned_cols=175  Identities=12%  Similarity=0.106  Sum_probs=118.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      ||.+|.+...+++.+.+...+..++|.|+.+++|+++.+.|...+...++..++.++.|+++||+|||+.+         
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~---------   71 (396)
T TIGR00882         1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHL---------   71 (396)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---------
Confidence            57889999999999999999999999999988999999999999999999999999999999999999876         


Q ss_pred             HHHHHHHHHHHH---HHHHhcCc---hhHH--HHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhH
Q psy4758         186 NTIGLWGSAAAL---VGLSFVGD---NLVG--AITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASIL  257 (318)
Q Consensus       186 ~~~~~~~~~~~~---~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~  257 (318)
                       ..+.....+..   ..+...+.   ....  .+..+..+.+. ....+....+..+.. ++++...|......++|..+
T Consensus        72 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~  148 (396)
T TIGR00882        72 -LWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVF-SAGAGAIEAYIEKVS-RNSNFEYGKARMFGCVGWAL  148 (396)
T ss_pred             -HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-ccchhhHHHHHHHhh-hhcccccchhhhhcccHHHH
Confidence             22222222211   11111111   1111  11112222222 222333333333322 22455677888888999999


Q ss_pred             hhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         258 GPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       258 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      +|.++|.+.+.     +|+..|++.+++.++..++.+...
T Consensus       149 g~~~~g~l~~~-----~~~~~f~~~~~~~~~~~~~~~~~~  183 (396)
T TIGR00882       149 CASIAGILFSI-----DPQIVFWLGSGFALILMLLLMFAK  183 (396)
T ss_pred             HHHHHhhhhcc-----CchHHHHHHHHHHHHHHHHHHHhC
Confidence            99999988653     688889888777776665554433

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.56  E-value=6.2e-14  Score=120.75  Aligned_cols=175  Identities=18%  Similarity=0.186  Sum_probs=125.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeec-----hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKS-----NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVS  181 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  181 (318)
                      +.+...++..++...+......++|.+.++ +|.+..+     .+...+...+...++.++.|+++||+|||+.+     
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-----   87 (408)
T PRK09874         14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML-----   87 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH-----
Confidence            345556667777777777888899999987 8888655     37788888899999999999999999999876     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc-cchhhHHHHHHHHHHHHHhHhhh
Q psy4758         182 RKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP-NFAGTLMGFTNGCANIASILGPL  260 (318)
Q Consensus       182 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~  260 (318)
                           ..+.++..++..+....++.+...+..++.+.+ ... .+.......+..| ++|+++.++.+...++|..++|.
T Consensus        88 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  160 (408)
T PRK09874         88 -----LRSALGMGIVMVLMGLAQNIWQFLILRALLGLL-GGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPL  160 (408)
T ss_pred             -----HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh-hhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence                 555556666665555544443333333444433 222 2333334444445 45999999999999999999999


Q ss_pred             hhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         261 FVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       261 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      +.+.+.+.    .+|+..+++.+++.++..+......+
T Consensus       161 ~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (408)
T PRK09874        161 AGGLLADS----YGLRPVFFITASVLFLCFLVTLFCIR  194 (408)
T ss_pred             HHHHHHHH----hCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999887    68999998888877766655544433

>PRK11043 putative transporter; Provisional

Probab=99.56  E-value=1e-13  Score=119.14  Aligned_cols=169  Identities=18%  Similarity=0.147  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHHHHHhhhhhh--hhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHH
Q psy4758         114 ITHLCQNWGYWTLLTEMPSY--INSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLW  191 (318)
Q Consensus       114 ~~~~~~~~~~~~~~~~~p~~--l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~  191 (318)
                      ...+.....+.+...+.|.+  +++++|.++.+.++..+...++..++.++.|+++||+|||+.+          ..+..
T Consensus        10 ~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~   79 (401)
T PRK11043         10 YLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL----------LAGLS   79 (401)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH----------HHHHH
Confidence            33333444444555555544  4455899999999999999999999999999999999999976          55666


Q ss_pred             HHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758         192 GSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT  270 (318)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  270 (318)
                      +..++.....+.++........++.+.+.... .+.......+..|++ ++...+..+....++..++|.+.+.+.+.  
T Consensus        80 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~--  156 (401)
T PRK11043         80 LFALGSLGMLWVESAAQLLVLRFVQAVGVCSA-AVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH--  156 (401)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence            66666666666555443444344444433222 223334445556555 88888888888999999999999999887  


Q ss_pred             CccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         271 SVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                        .+|+..|++.+++.++..+.....+
T Consensus       157 --~g~~~~~~~~~~~~~~~~~~~~~~~  181 (401)
T PRK11043        157 --FGWQAIFATLFAITLLLILPTLRLK  181 (401)
T ss_pred             --CChHHHHHHHHHHHHHHHHHHHHcC
Confidence              6899999888877776665554444

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.56  E-value=2e-14  Score=122.29  Aligned_cols=166  Identities=18%  Similarity=0.115  Sum_probs=121.1

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHH
Q psy4758         116 HLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAA  195 (318)
Q Consensus       116 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~  195 (318)
                      +++.......+....|.+.+ ++|.++.+.+++.+...++..++.++.|+++||+|+|+.+          ..+.++..+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~~~~~   72 (379)
T TIGR00881         4 YAAYYLVRKNFALAMPYLVE-EIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL----------PIGLILCAI   72 (379)
T ss_pred             hhHHHHhHHhhhhhhHHHHH-HhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh----------HHHHHHHHH
Confidence            34455555666666776554 4899999999999999999999999999999999999987          667777777


Q ss_pred             HHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhh-hhheeeccCCCcc
Q psy4758         196 ALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPL-FVGFIVTDNTSVS  273 (318)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~-~~g~l~~~~~~~~  273 (318)
                      +.++....++.+...+..++.+.+ .+...+....+..+..|++ |+++.++.+...++|..++|. +.+.+.+.    .
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~  147 (379)
T TIGR00881        73 VNLFFGFSTSLWVMAALWALNGIF-QGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL----Y  147 (379)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHhh-ccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc----C
Confidence            777777666544344444444443 3344556666666777765 999999999999999999994 55555555    6


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         274 QWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      +|+..|++.+++.++..+......
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~  171 (379)
T TIGR00881       148 SWHWVFIVPGIIAIIVSLICFLLL  171 (379)
T ss_pred             CchhHHHHHHHHHHHHHHHHheee
Confidence            788888887776666555544443

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.56  E-value=6.9e-14  Score=118.07  Aligned_cols=163  Identities=15%  Similarity=-0.019  Sum_probs=114.8

Q ss_pred             HHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758         120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG  199 (318)
Q Consensus       120 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~  199 (318)
                      ...+..+...+|.+.+| +|.|+.+.|++.+...++..++.+..|+++||+|||+.+          .........+...
T Consensus         4 ~~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~----------~~~~~~~~~~~~~   72 (368)
T TIGR00903         4 QAIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL----------FGSLATFAAAAGR   72 (368)
T ss_pred             hHHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH----------HHHHHHHHHHHHH
Confidence            45566677778887776 999999999999999999999999999999999988754          2222222222222


Q ss_pred             HHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHH
Q psy4758         200 LSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIF  279 (318)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~  279 (318)
                      ....++...+....++.+.+... ..+......+..++++|++++++.+....+|..+++.+.+.+.+.    .+|+..|
T Consensus        73 ~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~----~gWr~~f  147 (368)
T TIGR00903        73 LLDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA----GGLQLLI  147 (368)
T ss_pred             HHHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cchHHHH
Confidence            22213333355555555555443 333333334444455599999999999999999999999999887    7999999


Q ss_pred             HHHHHHHHHHHHHHHhhcc
Q psy4758         280 LIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~  298 (318)
                      ++.+++.++..++.....+
T Consensus       148 ~~~~~l~~~~~~~~~~~lp  166 (368)
T TIGR00903       148 IPIAAVAAAGIILVLAALP  166 (368)
T ss_pred             HHHHHHHHHHHHHHHHHcC
Confidence            9888877766655554443

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.55  E-value=1.1e-13  Score=118.98  Aligned_cols=177  Identities=13%  Similarity=0.063  Sum_probs=129.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI  188 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~  188 (318)
                      ++...+.+++............| .+++++|++..+.++..+...++..++.++.|++.||+|+|+.+          ..
T Consensus        10 ~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~----------~~   78 (412)
T TIGR02332        10 IIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI----------AG   78 (412)
T ss_pred             HHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH----------HH
Confidence            44445555555555556666666 55566999999999999999999999999999999999999976          66


Q ss_pred             HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758         189 GLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVT  267 (318)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~  267 (318)
                      +.++..++.....+.++...+....++.+.+.... .+....+..+.+|++ |++++++.+....+|..+++.+.+++.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~  157 (412)
T TIGR02332        79 IMVLWGIASTATMFATGPESLYLLRILVGIAEAGF-LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILA  157 (412)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            77777777777777666554555555566555443 344445667777765 9999999999999999999999998864


Q ss_pred             cC--CCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         268 DN--TSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       268 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      ..  .+..+|+..|++.++..++..++..+..
T Consensus       158 ~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~  189 (412)
T TIGR02332       158 LDGLMALKGWQWLFLLEGFPSVILGVMTWFWL  189 (412)
T ss_pred             CCCCCCccchhHHHHHHHHHHHHHHHHHhhcc
Confidence            31  1225899999988777666555444433

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00897 2A0118 polyol permease family

Probab=99.55  E-value=1.3e-13  Score=118.33  Aligned_cols=162  Identities=10%  Similarity=0.013  Sum_probs=110.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      |.+....+..++...+.+....++|.++++ +|.++.+.+...+...++..++.++.|++.||+|||+.+          
T Consensus        13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l----------   81 (402)
T TIGR00897        13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM----------   81 (402)
T ss_pred             chhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH----------
Confidence            455666677777777777777888999876 899999999999999999999999999999999999976          


Q ss_pred             HHHHHHHHHHHHHHH---hcCchhH-HHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHH-hHhhhh
Q psy4758         187 TIGLWGSAAALVGLS---FVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIAS-ILGPLF  261 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~~~~~~  261 (318)
                      ..+..+..++.....   ...++.. +.....+.+.+................++++|++++|+.+...++|. .++|.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~  161 (402)
T TIGR00897        82 MIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY  161 (402)
T ss_pred             HHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455555555443322   2222222 33333333433322222222223334456669999999999999996 589999


Q ss_pred             hheeeccCCCccchHHHHHHHH
Q psy4758         262 VGFIVTDNTSVSQWQTIFLIAA  283 (318)
Q Consensus       262 ~g~l~~~~~~~~~~~~~~~~~~  283 (318)
                      .+.+.+.    .+++..++...
T Consensus       162 ~~~l~~~----~g~~~~~~~~~  179 (402)
T TIGR00897       162 SSYAIPA----FGEMNTLWSAL  179 (402)
T ss_pred             HHhcccc----cchHHHHHHHH
Confidence            9998887    45444444333

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.55  E-value=2.1e-13  Score=116.31  Aligned_cols=152  Identities=15%  Similarity=0.072  Sum_probs=118.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      ++.++.+.+..++...........+|.+.++ +|.|..++|+..+...++..++.++.|+++||+|+|+.+         
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~---------   74 (381)
T PRK03633          5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY---------   74 (381)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH---------
Confidence            3557778888888888888889999999988 899999999999999999999999999999999999976         


Q ss_pred             HHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         186 NTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                       ..+.++..++.......++...+.+..++.+.+.....+........+..+++|+++++..+...++|..+||.+.+.+
T Consensus        75 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l  153 (381)
T PRK03633         75 -YLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV  153 (381)
T ss_pred             -HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence             5666777777766666665444444445555544433322233334444555699999999999999999999999998


Q ss_pred             ecc
Q psy4758         266 VTD  268 (318)
Q Consensus       266 ~~~  268 (318)
                      .+.
T Consensus       154 ~~~  156 (381)
T PRK03633        154 STE  156 (381)
T ss_pred             ccc
Confidence            775

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.55  E-value=1e-13  Score=118.99  Aligned_cols=167  Identities=16%  Similarity=0.159  Sum_probs=119.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      ++++..+.+..+....+.......+|.++++++|.|+.+.|+..+...++..+++++.|+++||+|||+.+         
T Consensus        14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l---------   84 (399)
T PRK05122         14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV---------   84 (399)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH---------
Confidence            46677788888888888888889999998887999999999999999999999999999999999999987         


Q ss_pred             HHHHHHHHHHHHHHH---HhcCch----h-HHHHHHHHHHHHHhhhccccccccccccC-ccchhhHHHHHHHHHHHHHh
Q psy4758         186 NTIGLWGSAAALVGL---SFVGDN----L-VGAITCLTLAIAINAGTYTGFLSNHLDLS-PNFAGTLMGFTNGCANIASI  256 (318)
Q Consensus       186 ~~~~~~~~~~~~~~~---~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~  256 (318)
                       ..+.++.+++....   ...++.    . .+.+..++.+.+... ..+.......+.. +++|+++.++.....++|..
T Consensus        85 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~  162 (399)
T PRK05122         85 -VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESL-AGTGSILWGIGRVGALHTGRVISWNGIATYGALA  162 (399)
T ss_pred             -HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHh-hcchHHHHHHhhcChhhhccchhhhhhhhhHHHH
Confidence             44544444332222   222211    1 123333444444333 3333344444444 45599999999888899999


Q ss_pred             HhhhhhheeeccCCCccchHHHHHHHHHHHH
Q psy4758         257 LGPLFVGFIVTDNTSVSQWQTIFLIAAAIFF  287 (318)
Q Consensus       257 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  287 (318)
                      ++|.+++.+.+.    .+|+..+.+..++.+
T Consensus       163 ~g~~l~~~l~~~----~g~~~~~~~~~~~~~  189 (399)
T PRK05122        163 IGAPLGVLLYHW----GGLAGLGLLIMLLAL  189 (399)
T ss_pred             HHHHHHHHHHHc----ccHHHHHHHHHHHHH
Confidence            999999999887    678877766555443

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.55  E-value=3.3e-13  Score=113.72  Aligned_cols=281  Identities=15%  Similarity=0.119  Sum_probs=162.4

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHH--HHHHHHHHHHHHHHhcCCCCCCCCCChh-
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVS--GAVAIVWAAAWCYIGANSPAQHPFISLE-   77 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   77 (318)
                      +..|+|++||+++.|+..++..+|.++++++++++. . +|||+-+.+.  ...+...+++..+++|..++.--..+++ 
T Consensus       139 I~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s-~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~  216 (511)
T TIGR00806       139 IFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T-LGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLED  216 (511)
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-cCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccc
Confidence            357999999999999999999999999999999954 4 8999876543  3344455566777888544311000000 


Q ss_pred             -H---hhhhhhccCccc-ccc---c--------cCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcce
Q psy4758          78 -E---RIYIETSLVHSS-TVS---S--------SMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFD  141 (318)
Q Consensus        78 -~---~~~~~~~~~~~~-~~~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~  141 (318)
                       +   ..+.++...++. +..   +        .-...+++..+||.++...+-+.+...+++-+..|.....++..+-+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~  296 (511)
T TIGR00806       217 VRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESL  296 (511)
T ss_pred             cccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCc
Confidence             0   000000000000 000   0        01123344567888888888888888888888888888777643322


Q ss_pred             eechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHh
Q psy4758         142 IKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAIN  221 (318)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (318)
                      +..-|..-+...+.+.+.++..|++-.++.+...+        .+.+..++.+..++++...++.+...+..+++...+.
T Consensus       297 ~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l--------~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~  368 (511)
T TIGR00806       297 NKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKL--------LIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQ  368 (511)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHH--------HHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHH
Confidence            23556666677777888888889886655332222        1233334444445555555554434444444444444


Q ss_pred             hhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhh----heeeccCCCccchHHHHHHHHHHHHHHHH
Q psy4758         222 AGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFV----GFIVTDNTSVSQWQTIFLIAAAIFFFGNL  291 (318)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~----g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (318)
                      ........-+...+..+..|...|+.+++.-+-..+-..+.    |.-.|....-.-|..-|.+.+.+.++..+
T Consensus       369 flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~  442 (511)
T TIGR00806       369 FLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAG  442 (511)
T ss_pred             HHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehhhHHHHHHHHHHHHHH
Confidence            44444444444455555579999998887777666655543    12111111112344456666655555544

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK12382 putative transporter; Provisional

Probab=99.54  E-value=1.6e-13  Score=117.57  Aligned_cols=164  Identities=16%  Similarity=0.141  Sum_probs=113.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      ++.++...+..+............+|.++++++|.|+.+.|+..+...+...+++++.|+++||+|||+.+         
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l---------   84 (392)
T PRK12382         14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA---------   84 (392)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH---------
Confidence            45566666667777777777778889888777999999999999999999999999999999999999976         


Q ss_pred             HHHHHHHHHHHHH---HHHhcC----chhH-HHHHHHHHHHHHhhhccccccccccccC-ccchhhHHHHHHHHHHHHHh
Q psy4758         186 NTIGLWGSAAALV---GLSFVG----DNLV-GAITCLTLAIAINAGTYTGFLSNHLDLS-PNFAGTLMGFTNGCANIASI  256 (318)
Q Consensus       186 ~~~~~~~~~~~~~---~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~  256 (318)
                       ..+.+...++.+   .....+    .+.. +.+..++.+.+.... .+.......+.. +++|++++++.....+.+..
T Consensus        85 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~  162 (392)
T PRK12382         85 -LQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQL-LTGALTWGLGLVGPKHSGKVMSWNGMAMYGALA  162 (392)
T ss_pred             -HHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCccccchhhhHHHHHHHHHHH
Confidence             444443333222   111111    1111 333334444443332 233333333444 45599999999998999999


Q ss_pred             HhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758         257 LGPLFVGFIVTDNTSVSQWQTIFLIAAA  284 (318)
Q Consensus       257 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~  284 (318)
                      ++|.+.+.+.+.    .+|+..+.+..+
T Consensus       163 ~g~~~~~~l~~~----~g~~~~~~~~~~  186 (392)
T PRK12382        163 AGAPLGLLLHSH----FGFAALALTTMV  186 (392)
T ss_pred             HHHHHHHHHHhc----cChHHHHHHHHH
Confidence            999999998887    678766554433

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.54  E-value=1.1e-13  Score=120.22  Aligned_cols=176  Identities=16%  Similarity=0.131  Sum_probs=117.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHH
Q psy4758         105 TSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKM  184 (318)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~  184 (318)
                      +++.++...+.+.........+....| ++++ .|+++.+.++..+...++..++.++.|+++||+|+|+.+        
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~--------   94 (438)
T TIGR00712        25 RWQVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL--------   94 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh--------
Confidence            334444444544444444444455556 4555 599999999999999999999999999999999999876        


Q ss_pred             HHHHHHHHHHHHHHHHHhcC---chhH-HHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhh
Q psy4758         185 WNTIGLWGSAAALVGLSFVG---DNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGP  259 (318)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~  259 (318)
                        ..+.++.+++.+.....+   ++.. ..+..++.+.+.+. ..+.......+..|+ +|++++|+.+...++++.++|
T Consensus        95 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~  171 (438)
T TIGR00712        95 --PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGM-GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPP  171 (438)
T ss_pred             --HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhc-chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHH
Confidence              556666666655554432   1221 22223333333222 333333444566655 599999999999999999999


Q ss_pred             hhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         260 LFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       260 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      .+.+...+..   .+|+..|++.+++.++..+.....
T Consensus       172 ~l~~~~~~~~---~~w~~~f~~~~~~~~i~~~~~~~~  205 (438)
T TIGR00712       172 LLVLLGMAWF---NDWHAALYFPAICAIIVALFAFAM  205 (438)
T ss_pred             HHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHh
Confidence            8877655432   589999998888777655444443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.54  E-value=1.3e-13  Score=119.36  Aligned_cols=162  Identities=11%  Similarity=0.190  Sum_probs=119.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758         108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT  187 (318)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~  187 (318)
                      .+....+.++.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+          .
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l----------~   87 (426)
T PRK12307         19 ALFSAWLGYVFDGFDFMLIFYIMYLIKAD-LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM----------M   87 (426)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------H
Confidence            34455555555555555665666655544 999999999999999999999999999999999999976          6


Q ss_pred             HHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758         188 IGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV  266 (318)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~  266 (318)
                      .+.++..++.....+.++...+.+..++.+.+... ..+....+..|..|++ |+++.++......+|..+++.+.+.+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~  166 (426)
T PRK12307         88 WSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAG-EYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA  166 (426)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence            67777777777766666554454555555554443 3444445555666655 999999999999999999999998887


Q ss_pred             ccCCCccchHHHHHHHHHH
Q psy4758         267 TDNTSVSQWQTIFLIAAAI  285 (318)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~  285 (318)
                      +.    .+|+..|++....
T Consensus       167 ~~----~~w~~~f~i~~~~  181 (426)
T PRK12307        167 EA----YGWRAAFFVGLLP  181 (426)
T ss_pred             cc----CCHHHHHHHHHHH
Confidence            77    7899998875433

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.53  E-value=1.4e-13  Score=117.20  Aligned_cols=170  Identities=10%  Similarity=0.121  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHH
Q psy4758         113 LITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWG  192 (318)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~  192 (318)
                      .+.+++...+.......+|.|+++++|.|+.+.|+..+...+...+..++.|+++||+|+||.+         ...+...
T Consensus         3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~---------~~~~~~~   73 (375)
T TIGR00899         3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGL---------ILFCCLL   73 (375)
T ss_pred             hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH---------HHHHHHH
Confidence            3456777777888889999999887999999999999999999999999999999999998854         1233444


Q ss_pred             HHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhH--HHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         193 SAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTL--MGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      ..++..+....++.....+...+.+.+. ....+.......+..|++ |+.+  .+......++|..++|.+.+.+.+. 
T Consensus        74 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-  151 (375)
T TIGR00899        74 AALACLLFAWNRNYFLLLVLGVLLSSFA-STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG-  151 (375)
T ss_pred             HHHHHHHHHhcchHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-
Confidence            4444445555544432333333333322 223344444455555544 5543  5777788899999999999999887 


Q ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         270 TSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                         .+|+..|++.+.+.++..+.....
T Consensus       152 ---~~~~~~f~~~~~~~~~~~~~~~~~  175 (375)
T TIGR00899       152 ---FGFTVMFLTAALAFVLCGVLVWLF  175 (375)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHHHHh
Confidence               789999999888777666655543

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.53  E-value=2.8e-13  Score=115.90  Aligned_cols=152  Identities=14%  Similarity=0.095  Sum_probs=120.3

Q ss_pred             HHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy4758         124 WTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV  203 (318)
Q Consensus       124 ~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~  203 (318)
                      ......+|.+.++ +|.|..+.++..+...++..++.++.|+++||+|+|+.+          ..+..+.+++.+...+.
T Consensus        26 ~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l----------~~~~~l~~~~~~~~~~a   94 (393)
T PRK09705         26 TSVGPLLPQLRQA-SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV----------AISLLLIAVGALMRELY   94 (393)
T ss_pred             hccchhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHC
Confidence            4556677777766 999999999999999999999999999999999999987          78888889999888888


Q ss_pred             CchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHH
Q psy4758         204 GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAA  283 (318)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~  283 (318)
                      ++...+....++.+.+... ..+.......+.+|++|+.++|+.......|..+++.+.+.+.++.   .+|+..+...+
T Consensus        95 ~~~~~ll~~r~l~Gig~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~---~~w~~~~~~~~  170 (393)
T PRK09705         95 PQSALLLSSALLGGVGIGI-IQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHS---ETWYQTLAWWA  170 (393)
T ss_pred             cchHHHHHHHHHHHhHHHH-HhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCHHHHHHHHH
Confidence            7766555555555655544 3344455666777877999999999999999999999999888763   37888876655


Q ss_pred             HHHHHHH
Q psy4758         284 AIFFFGN  290 (318)
Q Consensus       284 ~~~~~~~  290 (318)
                      +..++..
T Consensus       171 ~~~~~~~  177 (393)
T PRK09705        171 LPAVVAL  177 (393)
T ss_pred             HHHHHHH
Confidence            5544433

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.53  E-value=2.4e-13  Score=120.10  Aligned_cols=162  Identities=12%  Similarity=0.207  Sum_probs=118.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758         108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT  187 (318)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~  187 (318)
                      .+....+..+.............|.+.++ +|.++.+.+...+...++..++.++.|+++||+|||+.+          .
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~   89 (496)
T PRK03893         21 AFSAAWLGYLLDGFDFVLITLVLTEVQGE-FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAM----------V   89 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------H
Confidence            34455555555566666666667766555 899999999999999999999999999999999999876          5


Q ss_pred             HHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758         188 IGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV  266 (318)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~  266 (318)
                      .+.++.+++.+...+.++.+...+..++.+.+... ..+....+..+..|++ |+++.++.+...++|..++|.+.+.+.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~  168 (496)
T PRK03893         90 ISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAG-EYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV  168 (496)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            56666666666666655544344444444444333 3344444555666655 999999999999999999999999998


Q ss_pred             ccCCCccchHHHHHHHHHH
Q psy4758         267 TDNTSVSQWQTIFLIAAAI  285 (318)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~  285 (318)
                      +.    .+|+..|.+....
T Consensus       169 ~~----~~w~~~f~~~~~~  183 (496)
T PRK03893        169 PV----WGWRALFFIGILP  183 (496)
T ss_pred             cc----CCHHHHHHHHHHH
Confidence            87    7899888764433

>KOG3626|consensus

Probab=99.52  E-value=1.6e-12  Score=114.64  Aligned_cols=173  Identities=10%  Similarity=0.140  Sum_probs=125.9

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC--CC----------------CchHHHHHHHHHHHHHHHHHHH
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS--PW----------------GWPSIFYVSGAVAIVWAAAWCY   62 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--~~----------------gWr~~f~~~~~~~~~~~~~~~~   62 (318)
                      |-|...+++-...+|++.+...+|+++|.++++.+...  +.                .|..-|++.+.+.++.++..++
T Consensus       262 iDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~  341 (735)
T KOG3626|consen  262 IDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF  341 (735)
T ss_pred             ccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            34677788899999999999999999999999988762  01                3777888888888888777666


Q ss_pred             HhcCCCCCCCCCChhHhhhhhhccC--ccccc----cccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy4758          63 IGANSPAQHPFISLEERIYIETSLV--HSSTV----SSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINS  136 (318)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~  136 (318)
                      +-++.|+..++...++.+..+++.+  ++++.    -++-+...+++++||.+....+...+....+.++.+++|.|+++
T Consensus       342 fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~  421 (735)
T KOG3626|consen  342 FPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLET  421 (735)
T ss_pred             CcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHH
Confidence            5444454333211111111111111  00000    02233456788999999999999999999999999999999999


Q ss_pred             hhcceeechhhhchHHHHH-HHHHHHHHHHhHHHHhhh
Q psy4758         137 VLQFDIKSNGFLSAAPYLA-QWILILVFSWLADYIVAK  173 (318)
Q Consensus       137 ~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g~~  173 (318)
                      ++|.++..+..+.....+. ..+|.+++|++..|+..+
T Consensus       422 Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~  459 (735)
T KOG3626|consen  422 QFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS  459 (735)
T ss_pred             HcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence            9999999999988776654 678888999999987543

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.52  E-value=5.1e-13  Score=114.37  Aligned_cols=178  Identities=11%  Similarity=0.100  Sum_probs=117.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHH-HHHHHHHHHHHhHHHHhhhcCcchHHHHHH
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYL-AQWILILVFSWLADYIVAKQILSPTVSRKM  184 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~  184 (318)
                      |.+.+.+.+..++...+.......+|.|+.+++|.|+.+.|+..+...+ +..++.+.+++ .||+|+||.+.       
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~-------   85 (393)
T PRK15011         14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLI-------   85 (393)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHH-------
Confidence            5666777778888888888889999999988899999999998766655 45555555566 99999998541       


Q ss_pred             HHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-h--hhHHHHHHHHHHHHHhHhhhh
Q psy4758         185 WNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-A--GTLMGFTNGCANIASILGPLF  261 (318)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~g~~~~~~~~g~~~~~~~  261 (318)
                        ..+.+...+......+.++...+.+.....+.. .....+.......+..+++ |  +...++.+...++|..++|.+
T Consensus        86 --~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i  162 (393)
T PRK15011         86 --VFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSF-GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPL  162 (393)
T ss_pred             --HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHH
Confidence              233334344444444444333222222222222 2333444444444544332 3  334577788889999999999


Q ss_pred             hheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         262 VGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       262 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      ++.+.+.    .+|+..|++.++..++..+......+
T Consensus       163 ~~~l~~~----~gw~~~f~~~~~~~~~~~~~~~~~~~  195 (393)
T PRK15011        163 AYALAMG----FSFTVMYLSAAVAFIVCGVMVWLFLP  195 (393)
T ss_pred             HHHHHHh----cChHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9999887    79999999888777666655544333

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.51  E-value=3.7e-13  Score=117.32  Aligned_cols=153  Identities=16%  Similarity=0.155  Sum_probs=101.3

Q ss_pred             HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC--
Q psy4758         127 LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG--  204 (318)
Q Consensus       127 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--  204 (318)
                      ...+| ++.++ |+++.+.++..+...++..++.++.|+++||+|+|+.+          ..+.++.+++.+.+.+.+  
T Consensus        49 ~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l----------~~~~~~~~i~~~~~~~~~~~  116 (452)
T PRK11273         49 ALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL----------PAGLILAAAVMLFMGFVPWA  116 (452)
T ss_pred             HHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH----------HHHHHHHHHHHHHHHhhhcc
Confidence            34555 45565 99999999999999999999999999999999999976          566666666665555432  


Q ss_pred             -chhH-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhH-hhhhhheeeccCCCccchHHHHH
Q psy4758         205 -DNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASIL-GPLFVGFIVTDNTSVSQWQTIFL  280 (318)
Q Consensus       205 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~~~~~~~  280 (318)
                       ++.. .....++.+.+.+. ..+.......+..|++ |++++|+.+...++|+.+ +|.+...+...    .+|+..|+
T Consensus       117 ~~~~~~~~~~~~l~gi~~g~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~gw~~~f~  191 (452)
T PRK11273        117 TSSIAVMFVLLFLCGWFQGM-GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF----NDWHAALY  191 (452)
T ss_pred             cccHHHHHHHHHHHHHHHhc-cchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh----ccHHHHHH
Confidence             1222 33333444444333 3333333344555544 999999999999988754 44433333222    48999998


Q ss_pred             HHHHHHHHHHHHHHhh
Q psy4758         281 IAAAIFFFGNLIFLIF  296 (318)
Q Consensus       281 ~~~~~~~~~~~~~~~~  296 (318)
                      +.+++.++..++..+.
T Consensus       192 i~~~~~~~~~~l~~~~  207 (452)
T PRK11273        192 MPAFAAILVALFAFAM  207 (452)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8877766655444443

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.51  E-value=1.5e-13  Score=117.06  Aligned_cols=158  Identities=19%  Similarity=0.173  Sum_probs=119.8

Q ss_pred             HHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4758         123 YWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF  202 (318)
Q Consensus       123 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~  202 (318)
                      .......+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+          ..+.++..++......
T Consensus         7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~i~~~~~~~   75 (377)
T PRK11102          7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVI----------LGGTLVFALAAVACAL   75 (377)
T ss_pred             HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHH----------HHHHHHHHHHHHHHHH
Confidence            34455777888877 899999999999999999999999999999999999876          6667777777776666


Q ss_pred             cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758         203 VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI  281 (318)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  281 (318)
                      .++........++.+.+... ..+.......+..|++ |+++.++.+....+|..++|.+.+.+.+.    .+|+..|++
T Consensus        76 ~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~~~~~  150 (377)
T PRK11102         76 AQTIDQLIYMRFLHGLAAAA-ASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW----FSWHAIFWV  150 (377)
T ss_pred             HccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cChHHHHHH
Confidence            65544344444444444333 3344445556666655 99999999999999999999999999887    689999988


Q ss_pred             HHHHHHHHHHHHHhh
Q psy4758         282 AAAIFFFGNLIFLIF  296 (318)
Q Consensus       282 ~~~~~~~~~~~~~~~  296 (318)
                      .+.+.++..+.....
T Consensus       151 ~~~~~~~~~~~~~~~  165 (377)
T PRK11102        151 LALAAILAAALVFFF  165 (377)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            877776665554443

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.50  E-value=3.3e-13  Score=115.37  Aligned_cols=171  Identities=16%  Similarity=0.140  Sum_probs=120.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      +|+++.+++..++...+........+.+.++ ++.++.+.++..+...+...+..++.|+++||+|||+.+         
T Consensus         2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl---------   71 (393)
T PRK11195          2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVM---------   71 (393)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhh---------
Confidence            4567777777777777666666666666655 888888899999999999999999999999999999987         


Q ss_pred             HHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758         186 NTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~  264 (318)
                       ..+..+..++.+.+....+.   ....++.+.+ .+...+...++..|..|++ |+++.|+.+...+++..+||.++|.
T Consensus        72 -~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~-~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~  146 (393)
T PRK11195         72 -FIANGIKLLGCLLMLFGIHP---LLAYGLVGIG-AAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA  146 (393)
T ss_pred             -HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH-HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             44555544444443332221   2223334443 3445566666677777665 9999999999999999999999999


Q ss_pred             eeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         265 IVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      +.+.    . |...+.+.+.+.+++.+....+
T Consensus       147 l~~~----~-~~~~~~i~~~~~~~~~~~~~~l  173 (393)
T PRK11195        147 LADP----H-AEAALAVCALIYLLAALFNLFI  173 (393)
T ss_pred             HHHH----H-HHHHHHHHHHHHHHHHHHHhcC
Confidence            9886    2 6666666555544444333333

>TIGR00895 2A0115 benzoate transport

Probab=99.50  E-value=2.2e-13  Score=116.72  Aligned_cols=165  Identities=16%  Similarity=0.202  Sum_probs=119.1

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHH
Q psy4758         114 ITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGS  193 (318)
Q Consensus       114 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~  193 (318)
                      +..+...........+.|.+.++ +|.++.+.+++.+...++..++.++.|+++||+|||+.+          ..+.++.
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~   92 (398)
T TIGR00895        24 LIMLMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVL----------LWSILLF   92 (398)
T ss_pred             HHHHHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHH----------HHHHHHH
Confidence            33444444445555666766665 899999999999999999999999999999999999876          5566666


Q ss_pred             HHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCc
Q psy4758         194 AAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSV  272 (318)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~  272 (318)
                      .++..+....++.....+..++.+.+ .+...+....+..|..|++ |+++.++.+....+|..++|.+.+.+.+.    
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----  167 (398)
T TIGR00895        93 SVFTLLCALATNVTQLLILRFLAGLG-LGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV----  167 (398)
T ss_pred             HHHHHHHHHccchHHHHHHHHHHhcc-cccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc----
Confidence            66666666555544333333444433 3344555666677777765 99999999999999999999999999887    


Q ss_pred             cchHHHHHHHHHHHHHHHHHHH
Q psy4758         273 SQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      .+|+..+++.+++.++..++..
T Consensus       168 ~g~~~~~~~~~~~~~~~~~~~~  189 (398)
T TIGR00895       168 FGWRSLFYVGGIAPLLLLLLLM  189 (398)
T ss_pred             ccceeehhhhhhHHHHHHHHHH
Confidence            6788888877655554444433

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.50  E-value=3e-13  Score=117.86  Aligned_cols=157  Identities=9%  Similarity=0.040  Sum_probs=114.8

Q ss_pred             HHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758         125 TLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG  204 (318)
Q Consensus       125 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~  204 (318)
                      .+..++|.+.++ +|.+..+.++..+...+...++.++.|+++||+|+|+.+          ..+.++..++.+...+.+
T Consensus        37 ~~~~~~~~i~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l----------~~~~~~~~~~~~~~~~~~  105 (455)
T TIGR00892        37 AVTVFFKELQQI-FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV----------IAGGLLASLGMILASFSS  105 (455)
T ss_pred             chhhhHHHHHHH-hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH----------HhhHHHHHHHHHHHHHhh
Confidence            345567776666 899999999999988888899999999999999999876          556666666666666655


Q ss_pred             chhHHHHHH-HHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHH
Q psy4758         205 DNLVGAITC-LTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAA  283 (318)
Q Consensus       205 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~  283 (318)
                      +........ ++.+.+..... +.......+.++++|+++.|+.+....+|..++|.+.+.+.+.    .+|+..|++.+
T Consensus       106 ~~~~l~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~----~gwr~~f~~~~  180 (455)
T TIGR00892       106 NVIELYLTAGFITGLGLAFNF-QPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFES----FGWRGSFLILG  180 (455)
T ss_pred             hHHHHHHHHHHHHHhcchhhh-hHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH----hChHHHHHHHH
Confidence            443222222 33333333222 2333455567777799999999999999999999999999887    78999999998


Q ss_pred             HHHHHHHHHHHhhc
Q psy4758         284 AIFFFGNLIFLIFG  297 (318)
Q Consensus       284 ~~~~~~~~~~~~~~  297 (318)
                      ++.+++.+...+.+
T Consensus       181 ~~~~~~~v~~~~~~  194 (455)
T TIGR00892       181 GLLLHCCVCGALMR  194 (455)
T ss_pred             HHHHHHHHHHHHhC
Confidence            88776655544443

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.50  E-value=5.7e-13  Score=114.20  Aligned_cols=167  Identities=12%  Similarity=0.048  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHH
Q psy4758         112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLW  191 (318)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~  191 (318)
                      ......+..+........+|.+.++ +|.|+.+.++..+...++..++.++.|+++||+|||+.+          ..+..
T Consensus        13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~----------~~~~~   81 (394)
T PRK11652         13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI----------LVGMS   81 (394)
T ss_pred             HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH----------HHHHH
Confidence            3334444444444555566777666 999999999999999999999999999999999999976          55666


Q ss_pred             HHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCC
Q psy4758         192 GSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNT  270 (318)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~  270 (318)
                      +..++.......++.....+..++.+.+... ..+.......+..++ +++.+.+..+....++..++|.+.+.+.+.  
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~--  158 (394)
T PRK11652         82 IFILGTLVALFAHSLTVLIAASAIQGLGTGV-GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL--  158 (394)
T ss_pred             HHHHHHHHHHHHccHHHHHHHHHHHHhhhhH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence            6666666665555444343444444443322 223333344455554 489999999999999999999999998877  


Q ss_pred             CccchHHHHHHHHHHHHHHHHHHH
Q psy4758         271 SVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                        .+|+..|++.++..++..+...
T Consensus       159 --~g~~~~f~~~~~~~~~~~~~~~  180 (394)
T PRK11652        159 --FGWRACYLFLLLLGAGVTFSMA  180 (394)
T ss_pred             --cChHHHHHHHHHHHHHHHHHHH
Confidence              6899999887766655444433

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.49  E-value=6.2e-13  Score=114.45  Aligned_cols=158  Identities=12%  Similarity=0.046  Sum_probs=113.7

Q ss_pred             HHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4758         123 YWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF  202 (318)
Q Consensus       123 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~  202 (318)
                      ...+...+|.+.++ +|.++.+.+...+...++..++.++.|+++||+|||+.+          ..+..+..++......
T Consensus        29 ~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l----------~~~~~~~~~~~~~~~~   97 (406)
T PRK15402         29 NDMIQPGMLAVVED-FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM----------LAGVAFFILTCLAILL   97 (406)
T ss_pred             hhhHhcchHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------HHHHHHHHHHHHHHHH
Confidence            34444556665555 899999999999999999999999999999999999976          5566666666666666


Q ss_pred             cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758         203 VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI  281 (318)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  281 (318)
                      .++........++.+.+... ..+.......|..|++ |+++.++......++..++|.+.+.+.+.    .+|+..+++
T Consensus        98 ~~~~~~l~~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~----~~w~~~~~~  172 (406)
T PRK15402         98 AQSIEQFTLLRFLQGIGLCF-IGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV----LPWRGMFVL  172 (406)
T ss_pred             HccHHHHHHHHHHHHhHhhh-HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCccHHHHH
Confidence            65544333333444433322 2233444455666665 88889998888889999999999998887    689999988


Q ss_pred             HHHHHHHHHHHHHhh
Q psy4758         282 AAAIFFFGNLIFLIF  296 (318)
Q Consensus       282 ~~~~~~~~~~~~~~~  296 (318)
                      .+++.+++.+.....
T Consensus       173 ~~~~~~~~~~~~~~~  187 (406)
T PRK15402        173 FAALAALSFFGLWRA  187 (406)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            887777666554433

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.49  E-value=8.7e-13  Score=113.53  Aligned_cols=153  Identities=16%  Similarity=0.092  Sum_probs=115.6

Q ss_pred             HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCch
Q psy4758         127 LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDN  206 (318)
Q Consensus       127 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~  206 (318)
                      ..-+|..- +.+|.+..+.+...+...++..++.++.|+++||+|||+.+          ..+..+..++.+.....++.
T Consensus        36 ~p~l~~i~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----------~~~~~~~~~~~~~~~~a~~~  104 (413)
T PRK15403         36 QPGIINVV-RDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL----------ITGALIFTLACAATLFTTSM  104 (413)
T ss_pred             ccCHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH----------HHHHHHHHHHHHHHHHcCCH
Confidence            33444443 44899999999999999999999999999999999999976          56666777777777766665


Q ss_pred             hHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHH
Q psy4758         207 LVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAI  285 (318)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~  285 (318)
                      ..+.+..++.+.+... ..+.......|.+|++ +++++++.+...+++..++|.+++.+.+.    .+|+..|++.++.
T Consensus       105 ~~l~~~r~l~Gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~----~gw~~~f~~~~~~  179 (413)
T PRK15403        105 TQFLIARFIQGTSICF-IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF----VHWKVLFAIIAVM  179 (413)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence            5455555555554432 2333345566777765 89999999999999999999999998877    6899999998887


Q ss_pred             HHHHHHHHHh
Q psy4758         286 FFFGNLIFLI  295 (318)
Q Consensus       286 ~~~~~~~~~~  295 (318)
                      .+++.+....
T Consensus       180 ~~i~~~~~~~  189 (413)
T PRK15403        180 GLIAFVGLLL  189 (413)
T ss_pred             HHHHHHHHHH
Confidence            7776655443

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.48  E-value=5.6e-13  Score=120.56  Aligned_cols=160  Identities=18%  Similarity=0.115  Sum_probs=115.6

Q ss_pred             HHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q psy4758         126 LLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD  205 (318)
Q Consensus       126 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~  205 (318)
                      +...+|.+..+ +|.+..+.+++.+...++.+++.+++|+++||+|||+.+          .+++++..++.++..+.++
T Consensus       186 is~ilp~i~~~-~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l----------ii~lil~~i~~ll~afa~s  254 (742)
T TIGR01299       186 VGFVLPSAEKD-LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL----------LICLSVNGFFAFFSSFVQG  254 (742)
T ss_pred             HHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHHhh
Confidence            44455655554 899999999999999999999999999999999999976          5566666666666666655


Q ss_pred             hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC---------Cccch
Q psy4758         206 NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT---------SVSQW  275 (318)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~---------~~~~~  275 (318)
                      ...+.+..++.+++.++. .+....+..|..|.+ |+..+++.+....+|.++++.++..+....+         ...+|
T Consensus       255 ~~~llv~R~l~G~g~g~~-~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gW  333 (742)
T TIGR01299       255 YGFFLFCRLLSGFGIGGA-IPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSW  333 (742)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccH
Confidence            444555555566555443 466666777777776 9999999999999999999887655543211         11468


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhc
Q psy4758         276 QTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      +..+++.++..++.++...+++
T Consensus       334 R~l~~i~~lp~ll~ll~~~~lP  355 (742)
T TIGR01299       334 RVFVIVCAFPCVFAIGALTFMP  355 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC
Confidence            8888887776666655554443

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.47  E-value=5e-13  Score=114.26  Aligned_cols=181  Identities=12%  Similarity=0.085  Sum_probs=122.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      +|.++...+.....+...+......+.+-++++|+|+.|.+++.+...+...+..+..|++.||+|.|+.+         
T Consensus        33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~---------  103 (462)
T PRK15034         33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT---------  103 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH---------
Confidence            35666666666666666666666666666646999999999999999999999999999999999999876         


Q ss_pred             HHHHHHHHHHHHHHHHhc-----CchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhh
Q psy4758         186 NTIGLWGSAAALVGLSFV-----GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGP  259 (318)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~  259 (318)
                       ..+.++..+..+...+.     ++...+.+..++.+.+  +...+.......+.+|++ ||++.|+....+++|..+++
T Consensus       104 -~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig--g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~  180 (462)
T PRK15034        104 -VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA--GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ  180 (462)
T ss_pred             -HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH--HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence             55666666666666654     3333344445555554  334455555566667765 99999999777777776655


Q ss_pred             hhhheee-----ccC---------CCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         260 LFVGFIV-----TDN---------TSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       260 ~~~g~l~-----~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      .+...+.     +..         ++..+++.+.++.....++..++.++..+
T Consensus       181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~  233 (462)
T PRK15034        181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN  233 (462)
T ss_pred             HHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            5544322     111         11245777777777777766666665533

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.46  E-value=2e-12  Score=110.92  Aligned_cols=173  Identities=13%  Similarity=0.109  Sum_probs=119.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI  188 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~  188 (318)
                      ++.++...+.............|.+. +++|.++.+.|++.+...++..++++..|++.||+|+|+.+          ..
T Consensus         5 ~~~~~~~f~~~G~~~~~~~~l~~~~~-~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~----------~~   73 (410)
T TIGR00885         5 FALITSLFALWGFANDITNPMVPQFQ-QAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI----------LL   73 (410)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HH
Confidence            44555555555655555567777664 45999999999999999999999999999999999999977          66


Q ss_pred             HHHHHHHHHHHHHhc---CchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758         189 GLWGSAAALVGLSFV---GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       189 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~  264 (318)
                      +.++.+++..++...   ++........++.+.+.+. ..+....+..+..|++ +++..++.+...++|..++|.+.+.
T Consensus        74 g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~  152 (410)
T TIGR00885        74 GLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGF-LETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQ  152 (410)
T ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHH-HHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777777766665332   2222233444444554443 3333344444455554 9999999999999999999999887


Q ss_pred             eeccCC----------------------CccchHHHHHHHHHHHHHHHHHH
Q psy4758         265 IVTDNT----------------------SVSQWQTIFLIAAAIFFFGNLIF  293 (318)
Q Consensus       265 l~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~  293 (318)
                      +.....                      +..+|+.+|...+++.++..++.
T Consensus       153 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~  203 (410)
T TIGR00885       153 LILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI  203 (410)
T ss_pred             HHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            753310                      11358889988877666554443

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PTZ00207 hypothetical protein; Provisional

Probab=99.46  E-value=5.6e-12  Score=110.92  Aligned_cols=289  Identities=10%  Similarity=0.036  Sum_probs=185.8

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----CCCh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP-----FISL   76 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~   76 (318)
                      .+||| ++||++.|+..++.++|.++.+.+...+..  .+|+..|++.+++++++.++...++++.|.+..     +.++
T Consensus       146 ~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~  222 (591)
T PTZ00207        146 LSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDE  222 (591)
T ss_pred             HHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCH
Confidence            47886 789999999999999999865555544444  469999999999999988888888877653221     1122


Q ss_pred             hHhhhhhh----------------------------------------------------cc------------------
Q psy4758          77 EERIYIET----------------------------------------------------SL------------------   86 (318)
Q Consensus        77 ~~~~~~~~----------------------------------------------------~~------------------   86 (318)
                      +++.....                                                    ..                  
T Consensus       223 ~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~  302 (591)
T PTZ00207        223 EEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDG  302 (591)
T ss_pred             HHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc
Confidence            22210000                                                    00                  


Q ss_pred             ---C-c-c--c----------------------c-ccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy4758          87 ---V-H-S--S----------------------T-VSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINS  136 (318)
Q Consensus        87 ---~-~-~--~----------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~  136 (318)
                         + + +  +                      + ..+....++.+.+++..+|++++.+++.......+...+.++.+.
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~s  382 (591)
T PTZ00207        303 KRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTA  382 (591)
T ss_pred             CCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHH
Confidence               0 0 0  0                      0 000011256667778899999999999988888888888888887


Q ss_pred             hhcceeec--hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHH
Q psy4758         137 VLQFDIKS--NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCL  214 (318)
Q Consensus       137 ~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (318)
                      .-|.+...  ...+.+..++.+.+|.+..|.+.....+|+.- ....|-..+.+..+ +.++.+++....+...+.+..+
T Consensus       383 l~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~-~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~  460 (591)
T PTZ00207        383 LAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAE-DRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYF  460 (591)
T ss_pred             hcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccc-cccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHH
Confidence            32763322  33378889999999999999998444444410 00012223344444 4444444443333122444444


Q ss_pred             HHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHh-hhhhheeeccCC---------CccchHHHHHHHHH
Q psy4758         215 TLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILG-PLFVGFIVTDNT---------SVSQWQTIFLIAAA  284 (318)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~-~~~~g~l~~~~~---------~~~~~~~~~~~~~~  284 (318)
                      +++.+ .+..++.......|++.++-|+-+-+.....-+|+.+- -.+.|.++|+..         +..=++..|++.++
T Consensus       461 lvg~~-~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~  539 (591)
T PTZ00207        461 IAAFA-NGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLG  539 (591)
T ss_pred             HHHHH-hhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHH
Confidence            44444 55577778888889998668888888777777777655 678888887642         11347889999999


Q ss_pred             HHHHHHHHHHhh
Q psy4758         285 IFFFGNLIFLIF  296 (318)
Q Consensus       285 ~~~~~~~~~~~~  296 (318)
                      +++++.+....+
T Consensus       540 ~~~~g~~~s~~l  551 (591)
T PTZ00207        540 LSFLAFITSTYV  551 (591)
T ss_pred             HHHHHHHHHhhe
Confidence            988888776654

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.46  E-value=1e-12  Score=110.57  Aligned_cols=168  Identities=19%  Similarity=0.294  Sum_probs=130.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758         111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL  190 (318)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~  190 (318)
                      ...+..+.............|.+.++ .|.++.+.+...+...++..++.++.|+++||+|||+.+          ..+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~----------~~~~   71 (352)
T cd06174           3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVL----------LLGL   71 (352)
T ss_pred             HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhh----------HHHH
Confidence            44556667777777888888998877 799999999999999999999999999999999999976          6677


Q ss_pred             HHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         191 WGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      .+..++.......++........++.+.+ .+...+....+..|..|++ |+++.++.+...++|..++|.+.+.+.+. 
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-  149 (352)
T cd06174          72 LLFALGSLLLAFASSLWLLLVGRFLLGLG-GGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES-  149 (352)
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHHcc-cccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            77777777666665444333333333333 3445566667777777775 99999999999999999999999999888 


Q ss_pred             CCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         270 TSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                         .+|+..+.+.++..++..+...
T Consensus       150 ---~~~~~~~~~~~~~~~~~~~~~~  171 (352)
T cd06174         150 ---LGWRWLFLILAILGLLLALLLL  171 (352)
T ss_pred             ---hhHHHHHHHHHHHHHHHHHHHH
Confidence               6788888887777666655443

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.43  E-value=1.9e-12  Score=106.23  Aligned_cols=174  Identities=15%  Similarity=0.241  Sum_probs=126.2

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHH
Q psy4758         112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLW  191 (318)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~  191 (318)
                      ....++...+..+.+..-+...+.+++|+|+.|.+++.++..+.+.+.+++.|.+.||+|.|+..          ..+.+
T Consensus        18 ~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~----------~~s~~   87 (417)
T COG2223          18 LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT----------ILSML   87 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH----------HHHHH
Confidence            33344444444444545555555577999999999999999999999999999999999999976          66677


Q ss_pred             HHHHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         192 GSAAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       192 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      +..+..+.+.+..+++. .....+.+..+..+..........+..+|++ +|.++|+.. .+|+|..+...+...+... 
T Consensus        88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~-  165 (417)
T COG2223          88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA-  165 (417)
T ss_pred             HHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH-
Confidence            76776666666655441 2222333334444555666666666777766 999999988 9999999999888888887 


Q ss_pred             CCccc---hHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         270 TSVSQ---WQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       270 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                         .+   |+.+..+.....++..+..++..++.
T Consensus       166 ---~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~  196 (417)
T COG2223         166 ---FGFLAWRNVAGIYVVALAIAAVLAWLGMNDV  196 (417)
T ss_pred             ---HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence               45   88888888888888777766665443

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.43  E-value=9.7e-13  Score=115.21  Aligned_cols=161  Identities=14%  Similarity=0.032  Sum_probs=109.6

Q ss_pred             HHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4758         123 YWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF  202 (318)
Q Consensus       123 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~  202 (318)
                      -..+....|.+.++ +|.+..+.|++.+...++..++.++.|+++||+|+|+.+          ..+.++.++.......
T Consensus        45 r~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l----------~~~~~~~~~~~~~~~~  113 (467)
T PRK09556         45 RKNFKAAQNDMIST-YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFL----------PFLLILSAICMLGFGA  113 (467)
T ss_pred             hcChhhhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchH----------HHHHHHHHHHHHHHHH
Confidence            33445557776665 999999999999999999999999999999999999976          4444444444433332


Q ss_pred             -----cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchH
Q psy4758         203 -----VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQ  276 (318)
Q Consensus       203 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~  276 (318)
                           .++...+.+..++.+.+.+. ..+....+..+.+|++ ||+++|+.+...++|..+++.+..++.+... ..+|+
T Consensus       114 ~~~~~~~~~~~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~-~~~~~  191 (467)
T PRK09556        114 SLGSGSVSLGLMIALWALSGFFQST-GGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF-DGHVI  191 (467)
T ss_pred             HHhcccchHHHHHHHHHHHHHHHhc-cchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc-cCcch
Confidence                 23333244444444444333 3455555666777655 9999999999999999999988876655411 02577


Q ss_pred             HHHHHHHHHHHHHHHHHHhh
Q psy4758         277 TIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~  296 (318)
                      ..|.+.+++.++..++.+..
T Consensus       192 ~~f~~~g~~~~~~~i~~~~~  211 (467)
T PRK09556        192 GMFIFPSIIALIIGFIGLRY  211 (467)
T ss_pred             hHHHHHHHHHHHHHHHHHHh
Confidence            77877676666555444444

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.41  E-value=1.8e-12  Score=108.83  Aligned_cols=186  Identities=17%  Similarity=0.199  Sum_probs=146.1

Q ss_pred             hhhcc-hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhc----ceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcC
Q psy4758         102 AILTS-LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQ----FDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQI  175 (318)
Q Consensus       102 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~  175 (318)
                      ..+++ |.++.+...-+.--+++|++...+..|+....+    +|++++.-+++.+...--+..+++||++|| +|+|+.
T Consensus        15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t   94 (498)
T COG3104          15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT   94 (498)
T ss_pred             ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence            34554 557777788888899999999999999988777    999998888888877777888999999999 588887


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhcC--chhHHHHHHHHHHHHHhhhccccccccccccCccc---hhhHHHHHHHH
Q psy4758         176 LSPTVSRKMWNTIGLWGSAAALVGLSFVG--DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF---AGTLMGFTNGC  250 (318)
Q Consensus       176 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~  250 (318)
                      +          ..+.++..++.+++...+  ....+.+.+..+..+.+. .=+.......+.+|++   |-.+.++....
T Consensus        95 I----------~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl-~K~NiS~llg~ly~~~DprrD~gFt~fY~~  163 (498)
T COG3104          95 I----------VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGL-FKPNISSLLGELYPKDDPRRDGGFTLFYMG  163 (498)
T ss_pred             H----------HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccc-ccccHHHHHHHhcCCCCcccCCCccEEEEE
Confidence            7          788899999998888774  233255555555555444 3344444555555443   77888999999


Q ss_pred             HHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy4758         251 ANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ  302 (318)
Q Consensus       251 ~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (318)
                      .|+|+.++|.+.+++.+.    .+|...|...++-+.++++.+...++....
T Consensus       164 iNiGsl~~p~i~~~~~~~----~g~~~gF~~aavGm~~gl~~f~~~~r~~~~  211 (498)
T COG3104         164 INIGSLIAPIITGLLAIN----YGWHVGFGLAAVGMIIGLVIFLLGRRHVKG  211 (498)
T ss_pred             eehHHHHHHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence            999999999999999999    889999999999999999888877765443

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.41  E-value=4.2e-12  Score=108.31  Aligned_cols=162  Identities=16%  Similarity=0.024  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI  188 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~  188 (318)
                      .+...+.++....++.....++|.|+++ +|+|..+.|...+...+...++.++.|.++||++|+...     ++. ...
T Consensus         6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~-----~~~-~~~   78 (382)
T TIGR00902         6 FRWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIA-----LRL-LAL   78 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH-----HHH-HHH
Confidence            3445666777777777888999999988 899999999999999999999999999999999875422     111 111


Q ss_pred             HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         189 GLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      +..+..+  ......++.+...+...+.+.+... ..+....+..+ .+++|+++.|......++|..++|.+.+.+.+.
T Consensus        79 ~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~-~~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~  154 (382)
T TIGR00902        79 ASAIFAA--AFSAGAHNAWLLFIAIGLFALFFSA-GMPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM  154 (382)
T ss_pred             HHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHcc-chhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1111111  1222233333233333334434333 34444444444 345689999999999999999999999999998


Q ss_pred             CCCccchHHHHHHHHHH
Q psy4758         269 NTSVSQWQTIFLIAAAI  285 (318)
Q Consensus       269 ~~~~~~~~~~~~~~~~~  285 (318)
                          .+|+..|.+....
T Consensus       155 ----~g~~~~f~~~~~~  167 (382)
T TIGR00902       155 ----FDEQNILAILTAG  167 (382)
T ss_pred             ----cChhHHHHHHHHH
Confidence                7899888776655

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>KOG1330|consensus

Probab=99.41  E-value=6.2e-13  Score=110.15  Aligned_cols=180  Identities=15%  Similarity=0.126  Sum_probs=140.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      .....+++...+...--+.+-..++..- +.++.++...|++.....+...++++++|++.||+.|++++          
T Consensus        33 ~~l~il~~vnlmny~Dr~~iagv~~~v~-~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~----------  101 (493)
T KOG1330|consen   33 LTLVILCLVNLMNYADRYTIAGVLKEVQ-TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI----------  101 (493)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhHHHH-HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE----------
Confidence            3445555666666666666655444443 34899999999999999999999999999999999999988          


Q ss_pred             HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         187 TIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      .++..+-.++.+...+..+.+...+.-.+.+.+-.. ..+.....+.|.+|+. |++++++.+....+|+.+|-..++.+
T Consensus       102 ~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs-~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~v  180 (493)
T KOG1330|consen  102 AVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEAS-YSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVV  180 (493)
T ss_pred             eeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhh-hcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeee
Confidence            667777777777777774444355555666666544 5677777888888887 99999999999999999999999999


Q ss_pred             eccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758         266 VTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV  301 (318)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (318)
                      .+.+   ..|++.|.+.+++.++..++..++.++.+
T Consensus       181 a~~~---~~Wr~af~~~avl~vi~~~L~~~f~~eP~  213 (493)
T KOG1330|consen  181 ASLT---FWWRWAFRGSAVLGVIVGLLVFLFVREPE  213 (493)
T ss_pred             ccCc---cceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence            8885   44999999999999888887776655443

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.39  E-value=6.6e-12  Score=107.16  Aligned_cols=162  Identities=13%  Similarity=0.019  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHH
Q psy4758         114 ITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGS  193 (318)
Q Consensus       114 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~  193 (318)
                      ..++....+......++|.|+++ +|.|..++|...+...+...++.++.|.++||++|++..     ++.. .+...+ 
T Consensus        11 ~~~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~-----~~~~-~~~~~~-   82 (382)
T PRK11128         11 LSYFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPA-----LRLL-ALLTLL-   82 (382)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHH-----HHHH-HHHHHH-
Confidence            34666667777888899999988 899999999999999999999999999999999985321     1111 111111 


Q ss_pred             HHHHHHHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCc
Q psy4758         194 AAALVGLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSV  272 (318)
Q Consensus       194 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~  272 (318)
                       ... .+....++.+ +.+...+.+.+.. ...+...+...+. .++|+++.+......++|..+||.+++.+.++    
T Consensus        83 -~~~-~~~~~~~~~~~l~i~~~l~g~~~~-~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~----  154 (382)
T PRK11128         83 -FAV-AFWFGAHSFWLLFVAIGLFNLFFS-PLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW----  154 (382)
T ss_pred             -HHH-HHHHhcccHHHHHHHHHHHHHHHc-ccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH----
Confidence             111 2222222232 3333333343333 3334344444443 45588888889999999999999999999998    


Q ss_pred             cchHHHHHHHHHHHHHHHH
Q psy4758         273 SQWQTIFLIAAAIFFFGNL  291 (318)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~  291 (318)
                      .+|+..|++.++..++..+
T Consensus       155 ~g~~~~f~~~~~~~~~~~~  173 (382)
T PRK11128        155 FGEQAILWILTAGVASMLL  173 (382)
T ss_pred             cChhHHHHHHHHHHHHHHH
Confidence            7899998877765544433

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.37  E-value=3.1e-12  Score=112.38  Aligned_cols=141  Identities=13%  Similarity=0.071  Sum_probs=101.5

Q ss_pred             eechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchh---HHHHHHHHHHH
Q psy4758         142 IKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNL---VGAITCLTLAI  218 (318)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  218 (318)
                      ..+.++..+...++..++.++.|+++||+|||+.+          ..+.++..++..+.....+..   ...+..++.+.
T Consensus        70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~  139 (481)
T TIGR00879        70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL----------LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGI  139 (481)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH----------HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHh
Confidence            78999999999999999999999999999999876          555556666555554333222   24444455555


Q ss_pred             HHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhh---heeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         219 AINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFV---GFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~---g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      +... ..+....+..+..|++ |+++.++.+...++|..+++.+.   +...+.    .+|+..|++.+...++..+...
T Consensus       140 ~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~----~~w~~~f~~~~~~~~~~~~~~~  214 (481)
T TIGR00879       140 GVGI-ASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT----LGWRIPLGLQLIPAGLLFLGLF  214 (481)
T ss_pred             hhhH-HHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCC----ccHHHHHHHHHHHHHHHHHHHh
Confidence            4433 3444555666766655 99999999999999999999998   555455    6899999986666555554444


Q ss_pred             hhc
Q psy4758         295 IFG  297 (318)
Q Consensus       295 ~~~  297 (318)
                      +++
T Consensus       215 ~l~  217 (481)
T TIGR00879       215 FLP  217 (481)
T ss_pred             cCC
Confidence            443

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>KOG3764|consensus

Probab=99.36  E-value=2.9e-12  Score=104.16  Aligned_cols=151  Identities=20%  Similarity=0.219  Sum_probs=126.5

Q ss_pred             hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q psy4758         138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLA  217 (318)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (318)
                      .+-+..++|++++...+.+++.+++.|.+.||+|+|..+          .++++.+..+.+++.+..+.+...+.-.+-+
T Consensus       101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm----------~~Gl~vmf~sTilFafg~sy~~l~vAR~LQg  170 (464)
T KOG3764|consen  101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPM----------VAGLFVMFLSTILFAFGNSYPMLFVARSLQG  170 (464)
T ss_pred             ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHH----------HHHHHHHHHHHHHHHHcchhHHHHHHHHHhh
Confidence            445678899999999999999999999999999999877          8899999999999999888776677777777


Q ss_pred             HHHhhhccccccccccccCccc--hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758         218 IAINAGTYTGFLSNHLDLSPNF--AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLI  295 (318)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
                      .+..... ....+...+.+|++  |++++|+.-.+-.+|-.+||.++|.++|.    .|+...|.+.++++++...+.++
T Consensus       171 vgsA~~~-tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~----~Gk~aPFlVL~~v~Lld~~L~l~  245 (464)
T KOG3764|consen  171 VGSAFAD-TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF----AGKSAPFLVLAIVLLLDGALQLL  245 (464)
T ss_pred             hhHHHHH-hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh----cCCcCcHHHHHHHHHHHHHHHHh
Confidence            7765544 44444555666665  89999999999999999999999999999    78999999999999998888777


Q ss_pred             hcccccCC
Q psy4758         296 FGTSEVQP  303 (318)
Q Consensus       296 ~~~~~~~~  303 (318)
                      ..+..+.+
T Consensus       246 vi~p~~~~  253 (464)
T KOG3764|consen  246 VIEPTEMD  253 (464)
T ss_pred             eeCccccC
Confidence            76654443

>KOG2816|consensus

Probab=99.36  E-value=1.7e-11  Score=105.05  Aligned_cols=253  Identities=13%  Similarity=0.139  Sum_probs=174.1

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      ++|....++|....|+.+.....+..++|.+++.+.+. .|--.+|.+..+..++..+....++||+..+++.......+
T Consensus       137 vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~-~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~  215 (463)
T KOG2816|consen  137 VADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF-LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE  215 (463)
T ss_pred             eeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc
Confidence            46788889999999999999999999999999999998 89999999999999888888888899876543322100000


Q ss_pred             hhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758          81 YIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLT-EMPSYINSVLQFDIKSNGFLSAAPYLAQWIL  159 (318)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~  159 (318)
                      ....+...++.  .+.....+..-.+|..+.+++..+........-.. ..+.|+...+++++.+.+.+.+.......++
T Consensus       216 ~~~~~~~~~~~--~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~  293 (463)
T KOG2816|consen  216 LTPGSLDSSHV--ADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIIS  293 (463)
T ss_pred             cCCCcccchhh--hhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHH
Confidence            00000000000  11111111112245566655555554444433222 5578888889999999999999999999998


Q ss_pred             HHHHH-HhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccccc-ccCc
Q psy4758         160 ILVFS-WLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHL-DLSP  237 (318)
Q Consensus       160 ~~~~g-~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  237 (318)
                      ..+.. .+...++.++.+          ..++..-.+....+.+..+.+......... . ......+...+... ...+
T Consensus       294 ~l~~~~~l~~~l~~~~~i----------~lGl~~~~~~~~~~af~~~~w~~~~~~v~~-~-~~~~~~pa~~s~~s~~v~~  361 (463)
T KOG2816|consen  294 QLLLLPLLSSILGEKRLI----------SLGLLSEFLQLLLFAFATETWMMFAAGVVV-A-LAGIVFPAIRAFASILVSP  361 (463)
T ss_pred             HHHHHHHHHHHHhhhhHh----------hHHHHHHHHHHHHHHHhccchhhhHHHHHH-H-hhcchhHHHHhHHHhhccc
Confidence            88776 788888888855          778888888888888887776433322222 2 22333444444444 4455


Q ss_pred             cchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         238 NFAGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       238 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      +++|++.++...+..+.+.++|.+.+.++..
T Consensus       362 ~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~  392 (463)
T KOG2816|consen  362 EEQGKVFGIISGIEGLSGVVSPALYGNIFAL  392 (463)
T ss_pred             ccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence            6699999999999999999999999988654

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.36  E-value=1.5e-11  Score=105.98  Aligned_cols=182  Identities=13%  Similarity=0.067  Sum_probs=125.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHH----HHhhhcCcchHHHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLAD----YIVAKQILSPTVSRKM  184 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~~~~~~~r~~  184 (318)
                      ...++...+...+++.....+++.|+++ +|.++...+.......+.+++..++.|+++|    |+||||.+        
T Consensus         6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~--------   76 (477)
T TIGR01301         6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF--------   76 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH--------
Confidence            4445556666677777888889988877 9999999999999999999999999999999    59999876        


Q ss_pred             HHHHHHHHHHHHHHHHHhcCchh----------------HHHHHHHHHHHHHhhhccccccccccccCccc-h--hhHHH
Q psy4758         185 WNTIGLWGSAAALVGLSFVGDNL----------------VGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-A--GTLMG  245 (318)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~g  245 (318)
                       +..+.....+++.++.+..+..                ...+..+.+.-.......+...++..|..|++ |  +.+.+
T Consensus        77 -il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~  155 (477)
T TIGR01301        77 -IAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA  155 (477)
T ss_pred             -HHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence             2334555555666665543311                11111122222223333445566777877765 3  68999


Q ss_pred             HHHHHHHHHHhHhhhhhhee--eccC---C----C--ccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         246 FTNGCANIASILGPLFVGFI--VTDN---T----S--VSQWQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       246 ~~~~~~~~g~~~~~~~~g~l--~~~~---~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      +.+...++|+.+|+.+++..  .+..   .    .  ..+++..|++.+++.+++.+...+..+++
T Consensus       156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~  221 (477)
T TIGR01301       156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN  221 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence            99999999999999988764  1110   0    0  12778899988888888777766655443

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.36  E-value=1.6e-11  Score=107.53  Aligned_cols=180  Identities=23%  Similarity=0.171  Sum_probs=130.8

Q ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHH
Q psy4758         103 ILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSR  182 (318)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r  182 (318)
                      -+|||.|..+++.....+.+......-++-++.+ ..-|+...+++.....+..++.++++|.++||+.|||.+..    
T Consensus         6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~----   80 (524)
T PF05977_consen    6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILIL----   80 (524)
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH----
Confidence            4788999999999998888888777777766666 66788888998888899999999999999999999998733    


Q ss_pred             HHHHHHHHHHHHH---HHHHHHhcCc-hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhH
Q psy4758         183 KMWNTIGLWGSAA---ALVGLSFVGD-NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASIL  257 (318)
Q Consensus       183 ~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~  257 (318)
                            +-++..+   .+.++..... +.+.++...++.........+...+...++.|++ ...+.++.+...++...+
T Consensus        81 ------~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i  154 (524)
T PF05977_consen   81 ------SQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII  154 (524)
T ss_pred             ------HHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc
Confidence                  2222221   1222222222 2222333333333334556677888887877776 889999999999999999


Q ss_pred             hhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         258 GPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       258 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      ||.++|.++..    .|...+|.+.++..++.+......+
T Consensus       155 GPalgG~Lva~----~G~~~~f~inalsfl~~i~~l~~~~  190 (524)
T PF05977_consen  155 GPALGGILVAF----FGAAAAFLINALSFLISILALLRWK  190 (524)
T ss_pred             cchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            99999999888    6777888888877776655544443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.36  E-value=2.7e-11  Score=102.36  Aligned_cols=162  Identities=12%  Similarity=0.153  Sum_probs=122.3

Q ss_pred             HHhhhhhhhhhhhcceeec-hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758         126 LLTEMPSYINSVLQFDIKS-NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG  204 (318)
Q Consensus       126 ~~~~~p~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~  204 (318)
                      ...+...++.+++|+++.+ .|.+.+....+..+..+.+|+++||+|.|+.+          ..+.+...+..+++.+..
T Consensus        44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL----------~l~~l~Wsl~t~L~~fa~  113 (511)
T TIGR00806        44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL----------VLQALSFVCVWLLLLLGT  113 (511)
T ss_pred             hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHH
Confidence            3444555666679999999 99999999999999999999999999999977          667777777777777765


Q ss_pred             chhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHH
Q psy4758         205 DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAA  283 (318)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~  283 (318)
                      +...+.+.-++.|.+-+...  ....++...+|+ +|+++.|+.+....+|.++++.+.+++ ...+ ...|....++..
T Consensus       114 Sl~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~g-Wr~y~~Ln~Isl  189 (511)
T TIGR00806       114 SVWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLG-WISYSTLNIISL  189 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC-chhHHHHHHHHH
Confidence            54446666677777765555  445555555555 599999999999999999999999994 4422 235566666777


Q ss_pred             HHHHHHHHHHHhhccccc
Q psy4758         284 AIFFFGNLIFLIFGTSEV  301 (318)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~  301 (318)
                      +...++.++.+++++.++
T Consensus       190 ~s~~~a~~~a~~LP~~~~  207 (511)
T TIGR00806       190 VFMTFSVFLALFLKRPKR  207 (511)
T ss_pred             HHHHHHHHHHHhCCCCch
Confidence            777777777777775443

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK10133 L-fucose transporter; Provisional

Probab=99.36  E-value=4.2e-11  Score=103.80  Aligned_cols=147  Identities=12%  Similarity=0.072  Sum_probs=107.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758         108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT  187 (318)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~  187 (318)
                      .+..+.+..+...+.........|.+ ++.+|.|+.+.++..+...++..++.++.|++.||+|+|+.+          .
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l----------~   95 (438)
T PRK10133         27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI----------I   95 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------H
Confidence            34555566666677777777888887 556999999999999999999999999999999999999977          6


Q ss_pred             HHHHHHHHHHHHHH---hcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhh
Q psy4758         188 IGLWGSAAALVGLS---FVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVG  263 (318)
Q Consensus       188 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g  263 (318)
                      .+..+..++.++..   ..++...+....++.+.+.+.. .+.......+..|++ +...+++.+....+|..++|.+++
T Consensus        96 ~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~-~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~  174 (438)
T PRK10133         96 TGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCL-ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ  174 (438)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66667666665542   3334333445555555555443 334344444666666 556799999999999999998877


Q ss_pred             eee
Q psy4758         264 FIV  266 (318)
Q Consensus       264 ~l~  266 (318)
                      .+.
T Consensus       175 ~l~  177 (438)
T PRK10133        175 SLI  177 (438)
T ss_pred             HHH
Confidence            543

>TIGR00896 CynX cyanate transporter

Probab=99.36  E-value=8.7e-12  Score=105.37  Aligned_cols=150  Identities=16%  Similarity=0.131  Sum_probs=106.5

Q ss_pred             HHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758         125 TLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG  204 (318)
Q Consensus       125 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~  204 (318)
                      .....+|.+.++ +|+++.+.++..+...++..++.++.|+++||+|+|+.+          ..+.++..++.... ..+
T Consensus        18 ~~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~~~~~~~~~~-~~~   85 (355)
T TIGR00896        18 SVGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSV----------AAGLLLIAAGILIR-SAP   85 (355)
T ss_pred             cCcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHH----------HHHHHHHHHHHHHH-Hhc
Confidence            345667776666 999999999999999999999999999999999999976          44555555544444 333


Q ss_pred             chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758         205 DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA  284 (318)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  284 (318)
                      +...+.+..+..+.+... ..........+..|++|+++.++.+...++|..+++.+.+.+.+..+  .+|+..|...++
T Consensus        86 ~~~~l~~~~~~~g~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~--~~w~~~f~~~~~  162 (355)
T TIGR00896        86 GTALLFAGTALIGVGIAI-INVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSG--GHWQQALAWWAL  162 (355)
T ss_pred             cHHHHHHHHHHHHHHHHH-HhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHH
Confidence            333233333444444333 23334445567778789999999999999999999999988877631  238888876665


Q ss_pred             HHHHH
Q psy4758         285 IFFFG  289 (318)
Q Consensus       285 ~~~~~  289 (318)
                      +.++.
T Consensus       163 ~~~~~  167 (355)
T TIGR00896       163 PALLA  167 (355)
T ss_pred             HHHHH
Confidence            54443

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.34  E-value=3.9e-12  Score=111.48  Aligned_cols=148  Identities=14%  Similarity=0.250  Sum_probs=108.0

Q ss_pred             hhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc--CchhHHHHHHH
Q psy4758         137 VLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV--GDNLVGAITCL  214 (318)
Q Consensus       137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  214 (318)
                      +++++..+.|.+.+...++..++.++.|+++||+|+|+.+          ..+.++..++.++....  .+.....+..+
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~  139 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSI----------GIGMFLSSVISIVIPWAAGGGIALVVFCRV  139 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhh----------HHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence            4788999999999999999999999999999999999976          55555555554444332  22222333344


Q ss_pred             HHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHH
Q psy4758         215 TLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIF  293 (318)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (318)
                      +.+.+. +...+....+..+..|+ +|++++|+.+...++|..++|.+.+.+.+..   .+|+..|++.++..++..++.
T Consensus       140 ~~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~---~gw~~~f~i~~~~~~~~~~~~  215 (465)
T TIGR00894       140 IQGLAQ-GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW---GGWPMIFYVFGIVGCAWSLLW  215 (465)
T ss_pred             HHHHhc-ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCCeehhhhhHHHHHHHHHH
Confidence            444443 34455555666677765 4999999999999999999999999988762   279999998888776665555


Q ss_pred             Hhhcc
Q psy4758         294 LIFGT  298 (318)
Q Consensus       294 ~~~~~  298 (318)
                      +...+
T Consensus       216 ~~~~~  220 (465)
T TIGR00894       216 FVFPA  220 (465)
T ss_pred             HHHhc
Confidence            55443

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.33  E-value=5.1e-11  Score=104.76  Aligned_cols=179  Identities=15%  Similarity=0.133  Sum_probs=125.5

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH-----hhhcCc
Q psy4758         102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI-----VAKQIL  176 (318)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~  176 (318)
                      +..++|+.+.+...++............+|.++++ .|.|..+.+.. +...... ++.+++|.++||+     |||+..
T Consensus         7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~   83 (491)
T PRK11010          7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGW   83 (491)
T ss_pred             HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHH
Confidence            34556777778888888888888888999999988 79998888886 2223332 6789999999999     887743


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhcCc--hhH-HHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHH
Q psy4758         177 SPTVSRKMWNTIGLWGSAAALVGLSFVGD--NLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCAN  252 (318)
Q Consensus       177 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~  252 (318)
                               +..+.+...++...+.+.++  +.. .....++.+.+ .....+...++..|..|+ +|+++.++.....+
T Consensus        84 ---------ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~-~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~  153 (491)
T PRK11010         84 ---------LLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFC-SASQDIVFDAWKTDVLPAEERGAGAAISVLGYR  153 (491)
T ss_pred             ---------HHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHH
Confidence                     24455555555555544432  222 22233333333 334555566666677764 49999999999999


Q ss_pred             HHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         253 IASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       253 ~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      +|..+++.+.+++.+..   .+|+..|++.+++.++..+..+..
T Consensus       154 lG~llg~~l~~~l~~~~---~GWr~~f~i~a~l~ll~~l~~~~~  194 (491)
T PRK11010        154 LAMLVSGGLALWLADRY---LGWQGMYWLMAALLIPCIIATLLA  194 (491)
T ss_pred             HHHHHHHHHHHHHHhcc---cCHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999988831   589999999888777765555443

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.32  E-value=1.5e-11  Score=89.13  Aligned_cols=135  Identities=19%  Similarity=0.211  Sum_probs=96.8

Q ss_pred             hchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccc
Q psy4758         148 LSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTG  227 (318)
Q Consensus       148 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (318)
                      ..+...++..++.++.|++.||+++|+.+          ..+.....++.+.....++........+..+.+.. ...+.
T Consensus         3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~   71 (141)
T TIGR00880         3 LLAGYALGQLIYSPLSGLLTDRFGRKPVL----------LVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAA-FALVA   71 (141)
T ss_pred             EEEeehhHHHHHHhhHHHHHhhcchhHHH----------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHHHh
Confidence            44566788899999999999999999866          45555555655555555444433333444444333 33455


Q ss_pred             ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      ......|..|++ |+++.++.+...+++..++|.+.+.+.+.    .+|+..+.+.+.+.+++.+......
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  138 (141)
T TIGR00880        72 GAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF----LGWRAPFLFLAILALAAFILLAFLL  138 (141)
T ss_pred             HHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc----cchHHHHHHHHHHHHHHHHHHhhcC
Confidence            555666767665 99999999999999999999999999877    6788888888777777666655443

>PTZ00207 hypothetical protein; Provisional

Probab=99.32  E-value=3.5e-11  Score=105.94  Aligned_cols=161  Identities=9%  Similarity=0.115  Sum_probs=104.7

Q ss_pred             HHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758         120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG  199 (318)
Q Consensus       120 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~  199 (318)
                      ....+.+..+.|.. ++.+|+|..+.+.+..... ......++.|++.||+|+|+.+          .++.++..++.++
T Consensus        40 ~g~~y~fsv~s~~L-~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vl----------lig~ll~~iG~ll  107 (591)
T PTZ00207         40 TSFMYAFNLISGAM-QARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIF----------VLSMTVFCLGTLL  107 (591)
T ss_pred             HHHHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHH
Confidence            33445556666655 4559999999888876533 3334566789999999999987          6777777777777


Q ss_pred             HHhc------CchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCcc
Q psy4758         200 LSFV------GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVS  273 (318)
Q Consensus       200 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~  273 (318)
                      ....      .+.+.+.+..++.+.+... ..+.......+.+|++||.+.|+......+|+++.+.+...+...     
T Consensus       108 ~ala~~~~i~~s~~~l~l~r~l~G~G~~~-~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-----  181 (591)
T PTZ00207        108 FALTFQEVIEGSVVRLSVYNGLMTLGCML-FDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-----  181 (591)
T ss_pred             HHHHhcccccCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence            6664      2222233334444444332 223333445567888899999999999999998655554444432     


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         274 QWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      +|+..|++.+++.++..++.....+
T Consensus       182 ~~~~~fl~l~vl~~vv~ll~~~~vr  206 (591)
T PTZ00207        182 NTSAYFFFLMSFALVVGILAIVFMR  206 (591)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhee
Confidence            4667777777776666555554433

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.32  E-value=4.3e-11  Score=102.88  Aligned_cols=169  Identities=15%  Similarity=0.164  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH-----hhhcCcchHHHHHHHH
Q psy4758         112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI-----VAKQILSPTVSRKMWN  186 (318)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~r~~~~  186 (318)
                      +...++.+.........-+|.|+++ .|+|.++.|.+......  .+..+++|+++||+     ||||..         +
T Consensus         4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~---------l   71 (402)
T PRK11902          4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGW---------L   71 (402)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhH---------H
Confidence            3455667777777888899999999 79999999988655544  58889999999999     776532         2


Q ss_pred             HHHHHHHHHHHHHHHhcCc-h-hHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhh
Q psy4758         187 TIGLWGSAAALVGLSFVGD-N-LVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVG  263 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g  263 (318)
                      ..+.++.+++...+.+.++ . .+.......+...+.....+...++..+..|++ |+++.++.....++|..+++.+.+
T Consensus        72 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~  151 (402)
T PRK11902         72 LLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLAL  151 (402)
T ss_pred             HHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHH
Confidence            4555555555555555432 2 222222222222334445556666666777766 999999999888999999999988


Q ss_pred             eeeccCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy4758         264 FIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLI  295 (318)
Q Consensus       264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
                      .+.+..   .+|+..|++.+++.++..+....
T Consensus       152 ~l~~~~---~gw~~~f~i~a~~~l~~~l~~~~  180 (402)
T PRK11902        152 WLADRV---LGWGNTYLLMAGLMLAGALTTLW  180 (402)
T ss_pred             HHHhcc---cCHHHHHHHHHHHHHHHHHHHHh
Confidence            887752   48999999888877665554333

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.30  E-value=3e-13  Score=118.60  Aligned_cols=261  Identities=12%  Similarity=0.131  Sum_probs=0.0

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC-----------------C----CCchHHHHHHHHHHHHHHHH
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS-----------------P----WGWPSIFYVSGAVAIVWAAA   59 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-----------------~----~gWr~~f~~~~~~~~~~~~~   59 (318)
                      |-|..++++-+..+|+..+...+|+++|.++++.+...                 +    ..|..-|++.+.+.++.++.
T Consensus       166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip  245 (539)
T PF03137_consen  166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP  245 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            35788899999999999999999999999999877652                 0    13777788888888777666


Q ss_pred             HHHHhcCCCCCCCCCChh---Hhhhh---hhccCcccc------ccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHH
Q psy4758          60 WCYIGANSPAQHPFISLE---ERIYI---ETSLVHSST------VSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLL  127 (318)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (318)
                      .+.+-++-|+..+...++   +++..   .++..+++.      ..++-....+++++||.+....+..........++.
T Consensus       246 l~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~  325 (539)
T PF03137_consen  246 LFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFA  325 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence            665544444331111000   00000   000000000      013334567788999999999999999999999999


Q ss_pred             hhhhhhhhhhhcceeechhhhchHHHH-HHHHHHHHHHHhHHHHhhh--cCcchHHHHHHHHHHHHHHHHHHHHHHHh--
Q psy4758         128 TEMPSYINSVLQFDIKSNGFLSAAPYL-AQWILILVFSWLADYIVAK--QILSPTVSRKMWNTIGLWGSAAALVGLSF--  202 (318)
Q Consensus       128 ~~~p~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~--~~~~~~~~r~~~~~~~~~~~~~~~~~~~~--  202 (318)
                      +++|.|++.+++.++.+++.+.....+ +.++|.+++|++.+|+.-+  +...      +. .+..++..+......+  
T Consensus       326 tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~------~~-~v~~~v~~~~~~~~~~~~  398 (539)
T PF03137_consen  326 TFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAK------FC-IVVSIVSVILYSPLFFLG  398 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHH------HH-HHHHHHHHHHHHHHHeec
Confidence            999999999999999999988877665 5788899999999998643  2221      11 1111111111000000  


Q ss_pred             ---------cCc-----------------------------------h----hHHHHHHHHHH-HHHhhhcccccccccc
Q psy4758         203 ---------VGD-----------------------------------N----LVGAITCLTLA-IAINAGTYTGFLSNHL  233 (318)
Q Consensus       203 ---------~~~-----------------------------------~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~  233 (318)
                               ..+                                   .    .......+.+. +.......+.......
T Consensus       399 C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR  478 (539)
T PF03137_consen  399 CPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLR  478 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeec
Confidence                     000                                   0    00111121222 2223344455566666


Q ss_pred             ccCccchhhHHHHHHHHHH-HHHhHhhhhhheeecc
Q psy4758         234 DLSPNFAGTLMGFTNGCAN-IASILGPLFVGFIVTD  268 (318)
Q Consensus       234 ~~~~~~~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~  268 (318)
                      .+.+++|+.|.|+...+.+ +|..-+|.+.|.+.|.
T Consensus       479 ~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~  514 (539)
T PF03137_consen  479 CVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS  514 (539)
T ss_dssp             ------------------------------------
T ss_pred             cCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence            6777779999999977765 5778999999999998

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.30  E-value=7.6e-12  Score=104.72  Aligned_cols=178  Identities=15%  Similarity=0.125  Sum_probs=110.2

Q ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHH
Q psy4758         104 LTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRK  183 (318)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~  183 (318)
                      +||+.+|.+...+++.++.+....++.|.++++..|+|++++|.+.+...+..++.+++.|.++||+|.||.+..     
T Consensus         4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~-----   78 (412)
T PF01306_consen    4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLW-----   78 (412)
T ss_dssp             CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHH-----
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHH-----
Confidence            467889999999999999999999999999998899999999999999999999999999999999998885411     


Q ss_pred             HHHHHHHHHHH-HHHHHH---HhcCchhHHHHHHHHHHHHHhhh---ccccccccccccCccchhhHHHHHHHHHHHHHh
Q psy4758         184 MWNTIGLWGSA-AALVGL---SFVGDNLVGAITCLTLAIAINAG---TYTGFLSNHLDLSPNFAGTLMGFTNGCANIASI  256 (318)
Q Consensus       184 ~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~  256 (318)
                         .+..++.. .....+   +..+.+.  ....+..+...+..   ..+..-++.++ ..++.+--.|=.-..+.+|.+
T Consensus        79 ---~i~~l~~l~~pff~~v~~pll~~n~--~lg~iig~i~l~~~f~~~~~~~Ea~~er-~sr~~~feYG~~R~wGSig~a  152 (412)
T PF01306_consen   79 ---FIAILLLLFGPFFIYVFGPLLQSNF--WLGAIIGGIYLGLVFNAGVPLSEAYAER-VSRRNGFEYGRARMWGSIGFA  152 (412)
T ss_dssp             ---HHHHHHHTCHHHHHHTHHHHHHTT---HHHHHHTTTTTTTTTTTHHHHHHHHHHH-HHHHHSS-HHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHcccchHHHHHHHH-HHHHhcCCcchHHHHhhHHHH
Confidence               12222111 111111   1112221  11111111111111   11222222222 222355667777888999999


Q ss_pred             HhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         257 LGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       257 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      ++..++|.+.+.     +....|++.....++..++....+
T Consensus       153 i~s~~~G~L~~i-----~p~~~fwi~s~~~~il~lll~~~~  188 (412)
T PF01306_consen  153 IASLLAGILFNI-----NPNIIFWIASAAAIILLLLLLLLK  188 (412)
T ss_dssp             HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred             HHHHHhheeeee-----CccHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999876     335566665555444444433333

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.30  E-value=5.9e-11  Score=115.09  Aligned_cols=184  Identities=13%  Similarity=-0.005  Sum_probs=110.1

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhh----hhhhhhhhhcce-eechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758         102 AILTSLPVWAVLITHLCQNWGYWTLLTE----MPSYINSVLQFD-IKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL  176 (318)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~  176 (318)
                      .+++++++..++...++..++.+....-    ....+.+..+.+ ....++..+...+..++.++++|+++||+++|+++
T Consensus         6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~   85 (1140)
T PRK06814          6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA   85 (1140)
T ss_pred             hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence            4677777777666666655554333222    221222212221 13456667777888999999999999999999864


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHH
Q psy4758         177 SPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIAS  255 (318)
Q Consensus       177 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~  255 (318)
                      ..      ......+....+.. ....++.+.+++..++.+.+... ..+...+...+..|++ ++.++|+.+...++|.
T Consensus        86 ~~------~~~~~~~~~~~~~~-~~~~~s~~~l~~~~~l~gi~~a~-~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~  157 (1140)
T PRK06814         86 KI------LKFAEIGIAALAIY-GFHLNSVPLLFAALFLMGIHSAL-FGPIKYSILPDHLNKDELLGANALVEAGTFIAI  157 (1140)
T ss_pred             HH------HHHHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHh-hchHHHHhhHhhcCccccchhhHHHHHHHHHHH
Confidence            11      01111111111111 11223333344444555554443 4455555555666555 9999999999999999


Q ss_pred             hHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         256 ILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       256 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      .+||.++|++.+.    .+|+..|...+++.+++.++...++
T Consensus       158 ~igp~l~g~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  195 (1140)
T PRK06814        158 LLGTIIGGLATIS----GNFVILVALLMGIAVLGWLASLFIP  195 (1140)
T ss_pred             HHHHHHHHHHHhc----cccHHHHHHHHHHHHHHHHHHhhCC
Confidence            9999999999987    6788888544444444444444433

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.28  E-value=5.1e-11  Score=107.35  Aligned_cols=160  Identities=16%  Similarity=0.227  Sum_probs=112.6

Q ss_pred             hhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC---
Q psy4758         128 TEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG---  204 (318)
Q Consensus       128 ~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---  204 (318)
                      ..+|. ++++++++..+.|++.+...++..++.++.+++.||.+||+.+          .++.++.+++.+++...+   
T Consensus        54 ~~l~~-iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i----------~~g~ll~~lg~ll~alphf~~  122 (633)
T TIGR00805        54 SSLTT-IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI----------GIGCAIMGLGSFLLSLPHFLS  122 (633)
T ss_pred             hhchh-hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE----------EecHHHHHHHHHHHhChHHhc
Confidence            33444 4555999999999999999999999999999999999999988          556666666666554432   


Q ss_pred             ----------------------------------------------c-hhH-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758         205 ----------------------------------------------D-NLV-GAITCLTLAIAINAGTYTGFLSNHLDLS  236 (318)
Q Consensus       205 ----------------------------------------------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (318)
                                                                    + ... +.+..++.|.+ .+...+....++.|..
T Consensus       123 ~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG-~~~~~~~~~~~i~d~~  201 (633)
T TIGR00805       123 GRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIG-ATPIFPLGISYIDDFA  201 (633)
T ss_pred             CCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhcc-CCcchhcCchhhhccC
Confidence                                                          0 011 22333444443 3334556667777877


Q ss_pred             ccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCC--------------c----cchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         237 PNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTS--------------V----SQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       237 ~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~--------------~----~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      |++ |+...|+.+....+|..+|+.+++++.+...+              .    .+|...|++.+++.++..+..+.++
T Consensus       202 ~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p  281 (633)
T TIGR00805       202 KSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP  281 (633)
T ss_pred             CccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            766 99999999999999999999999987754211              0    1367778887777777665555555


Q ss_pred             cc
Q psy4758         298 TS  299 (318)
Q Consensus       298 ~~  299 (318)
                      ++
T Consensus       282 ~~  283 (633)
T TIGR00805       282 KA  283 (633)
T ss_pred             cc
Confidence            43

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.28  E-value=1e-11  Score=109.37  Aligned_cols=150  Identities=12%  Similarity=0.068  Sum_probs=101.5

Q ss_pred             hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc---------Cchh-
Q psy4758         138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV---------GDNL-  207 (318)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---------~~~~-  207 (318)
                      ++.+..+.++..+...++..++.++.|+++||+|||+.+          ..+.++..++.+.....         ++.. 
T Consensus        50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~----------~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~  119 (479)
T PRK10077         50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL----------KIAAVLFFISALGSAWPEFGFTSIGPDNTGY  119 (479)
T ss_pred             ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHhhccccccccccchhH
Confidence            378888999999999999999999999999999999977          45555555554443331         1111 


Q ss_pred             -H-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC----CCccchHHHHH
Q psy4758         208 -V-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN----TSVSQWQTIFL  280 (318)
Q Consensus       208 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----~~~~~~~~~~~  280 (318)
                       . +.+.-++.+.+.+. ..+....+..|..|++ |++++++.+....+|..+++.+.+.+....    ....+|+..|+
T Consensus       120 ~~~l~~~R~l~G~~~g~-~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~  198 (479)
T PRK10077        120 VPEFVIYRIIGGIGVGL-ASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFA  198 (479)
T ss_pred             HHHHHHHHHHHhhhHhH-HhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHH
Confidence             1 23333444444433 4455555666777655 999999999988999888877655443211    01268999998


Q ss_pred             HHHHHHHHHHHHHHhhcc
Q psy4758         281 IAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~  298 (318)
                      +.++..++..+...++++
T Consensus       199 ~~~~~~~~~~~~~~~l~~  216 (479)
T PRK10077        199 SEAIPALLFLMLLYFVPE  216 (479)
T ss_pred             HHHHHHHHHHHHHHcCCC
Confidence            887777666555444443

>PRK09952 shikimate transporter; Provisional

Probab=99.27  E-value=2.1e-10  Score=99.68  Aligned_cols=168  Identities=13%  Similarity=0.140  Sum_probs=105.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhh--cceeechhhhc-----hHHHHHHHHHHHHHHHhHHHHhhhcCcchHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVL--QFDIKSNGFLS-----AAPYLAQWILILVFSWLADYIVAKQILSPTVS  181 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~--g~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  181 (318)
                      +....+..++...-...+....|.+..+.+  +.++. .+...     ....++..+++++.|+++||+|||+.+     
T Consensus        24 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l-----   97 (438)
T PRK09952         24 ALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML-----   97 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH-----
Confidence            333444444444444444445555555433  55555 34332     233455678889999999999999977     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchhH--------HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHH
Q psy4758         182 RKMWNTIGLWGSAAALVGLSFVGDNLV--------GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCAN  252 (318)
Q Consensus       182 r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~  252 (318)
                           ..+.++..++.++..+.++...        +...-++.+.+.+. ..+....+..|..|++ |+...+..+....
T Consensus        98 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~-~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~  171 (438)
T PRK09952         98 -----MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGG-EWGGAALLAVESAPKNKKAFYSSGVQVGYG  171 (438)
T ss_pred             -----HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcc-cHHHHHHHHHHhCCCCCCcHHHHHHHHHHH
Confidence                 6777788888888877776541        22333444444433 3344455666777665 9999999888888


Q ss_pred             HHHhHhhhhhheeeccCC----CccchHHHHHHHHHHHHH
Q psy4758         253 IASILGPLFVGFIVTDNT----SVSQWQTIFLIAAAIFFF  288 (318)
Q Consensus       253 ~g~~~~~~~~g~l~~~~~----~~~~~~~~~~~~~~~~~~  288 (318)
                      +|..+++.+...+....+    ...+|+..|++.++..++
T Consensus       172 ~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~  211 (438)
T PRK09952        172 VGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI  211 (438)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence            888888776665543211    126899999877665443

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.26  E-value=3.2e-09  Score=92.15  Aligned_cols=279  Identities=12%  Similarity=0.065  Sum_probs=143.6

Q ss_pred             CccCCCC--CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCC-----CCCC
Q psy4758           2 SKWAPPM--ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQ-----HPFI   74 (318)
Q Consensus         2 ~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~   74 (318)
                      +|.+|++  +|...+++...+.++|..++|.+.+++.+. .|||+.|.+.++.. +.+++.+...++..++     ++..
T Consensus       126 ~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~-~Gw~~~F~iaaigm-~l~li~~~~~~~~l~~~~~~~~~~~  203 (493)
T PRK15462        126 GELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE-YSWAMGFGLAAVGM-IAGLVIFLCGNRHFTHTRGVNKKVL  203 (493)
T ss_pred             HHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh-hChHHHHHHHHHHH-HHHHHHHHHhhhhhccCCCCCCCCc
Confidence            5788875  799999999999999999999999999988 89999999876543 3334333332211111     1111


Q ss_pred             ChhHhhh---------------hhhc-cCccccc----------------cccCCcchhhhhcchh--HHHHHHHHHHHH
Q psy4758          75 SLEERIY---------------IETS-LVHSSTV----------------SSSMKVPWKAILTSLP--VWAVLITHLCQN  120 (318)
Q Consensus        75 ~~~~~~~---------------~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  120 (318)
                      ++++...               .... ..++...                ....+  ..+.-|+|-  +..+.+......
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~er~r~~~~~~l~~~~~~Fw  281 (493)
T PRK15462        204 RATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKA--ENQKQRKELGLIVTLTFFSMLFW  281 (493)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHhhHHHHHHHHHHHHHHH
Confidence            1100000               0000 0000000                00000  000011221  122222222223


Q ss_pred             HHHHHHHhhhhhhhhhh-----hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhh-cCcchHHHHHHHHHHHHHHHH
Q psy4758         121 WGYWTLLTEMPSYINSV-----LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAK-QILSPTVSRKMWNTIGLWGSA  194 (318)
Q Consensus       121 ~~~~~~~~~~p~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-~~~~~~~~r~~~~~~~~~~~~  194 (318)
                      ..+....+-+..|.++.     +|++ ....+..+...+.-++.+++.+++=.|..+| +-...  .+|  ..+++++.+
T Consensus       282 ~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~--~~K--fa~g~~~~g  356 (493)
T PRK15462        282 AFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRI--WGK--FALGLGLMS  356 (493)
T ss_pred             HHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCc--HHH--HHHHHHHHH
Confidence            33333334444444442     2332 2355667777777777788877776666432 21111  011  145666666


Q ss_pred             HHHHHHHhc----Cc----hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHH-HHHHhHhhhhhhe
Q psy4758         195 AALVGLSFV----GD----NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCA-NIASILGPLFVGF  264 (318)
Q Consensus       195 ~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~-~~g~~~~~~~~g~  264 (318)
                      ++++.+...    .+    ...+.+....+....-....|...+...++.|++ +|..+|+..... .+|..++..+.+.
T Consensus       357 ~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~  436 (493)
T PRK15462        357 AGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQ  436 (493)
T ss_pred             HHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666555321    11    1112333333333334456777777888889988 999999985533 5666666666555


Q ss_pred             eeccCC--------CccchHHHHHHHHHHHHHH
Q psy4758         265 IVTDNT--------SVSQWQTIFLIAAAIFFFG  289 (318)
Q Consensus       265 l~~~~~--------~~~~~~~~~~~~~~~~~~~  289 (318)
                      ..+...        +...|...|...+...+++
T Consensus       437 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  469 (493)
T PRK15462        437 TSQASFDASGAINYSINAYIEVFDQITWGALAC  469 (493)
T ss_pred             hccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence            432110        1125677777777665554

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.26  E-value=1.3e-10  Score=101.84  Aligned_cols=177  Identities=14%  Similarity=0.060  Sum_probs=117.9

Q ss_pred             hcchhHHHHHHHHHHHHHHHHH----HHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchH
Q psy4758         104 LTSLPVWAVLITHLCQNWGYWT----LLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPT  179 (318)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~  179 (318)
                      +++++++.......+.....+.    ....++....+ .|-+ ....++.....++..+..++.|+++|.+|||..+   
T Consensus        37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~---  111 (599)
T PF06609_consen   37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF---  111 (599)
T ss_pred             eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH---
Confidence            4566666554444333332222    22334544444 6665 4555777778889999999999999999999876   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHh
Q psy4758         180 VSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILG  258 (318)
Q Consensus       180 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~  258 (318)
                             +.+.++..++.++....++.........+.+.+. +.. ........|..|.+ |..+.++.....-.....+
T Consensus       112 -------i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvga-G~~-~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~  182 (599)
T PF06609_consen  112 -------IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGA-GVQ-ELAALAISELVPNKWRGLGLAIASIPFIITTWIS  182 (599)
T ss_pred             -------HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhh-HHH-HHHHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence                   7888888889888888777665555555555543 222 23344467777877 8887777665544555567


Q ss_pred             hhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         259 PLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       259 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      |.+...+...    .+||+.|++..+...++++...++.+
T Consensus       183 ~~ia~~~~~~----~~WRw~~~~~~i~~~i~~vl~~~fY~  218 (599)
T PF06609_consen  183 PLIAQLFAAH----SGWRWIFYIFIIWSGIALVLIFFFYF  218 (599)
T ss_pred             HHHHHHhccC----CCcchHHHHHHHHHHHHHHHHHHHhC
Confidence            7777666555    68999999998887777766555443

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.25  E-value=2.1e-10  Score=99.62  Aligned_cols=164  Identities=13%  Similarity=0.087  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhc---ceeec---hhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758         114 ITHLCQNWGYWTLLTEMPSYINSVLQ---FDIKS---NGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT  187 (318)
Q Consensus       114 ~~~~~~~~~~~~~~~~~p~~l~~~~g---~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~  187 (318)
                      +..++.......+....| ++.++++   .+..+   .+.......++..++++++|+++||+|||+.+          .
T Consensus        29 ~~~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l----------~   97 (432)
T PRK10406         29 SGNLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM----------L   97 (432)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH----------H
Confidence            334444444444444444 4444453   34333   33344555566679999999999999999977          6


Q ss_pred             HHHHHHHHHHHHHHhcCchh--------HHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHh
Q psy4758         188 IGLWGSAAALVGLSFVGDNL--------VGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILG  258 (318)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~  258 (318)
                      .+.++..++.+...+.++..        .+.+.-++.+.+.+. ..+....+..|..|++ |+.+.++.......|..++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~-~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~  176 (432)
T PRK10406         98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGG-EYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA  176 (432)
T ss_pred             HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhh-hHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence            67777777777776665432        133344455554433 4455556666766655 9999998877777777777


Q ss_pred             hhhhheeeccC----CCccchHHHHHHHHHHHHHH
Q psy4758         259 PLFVGFIVTDN----TSVSQWQTIFLIAAAIFFFG  289 (318)
Q Consensus       259 ~~~~g~l~~~~----~~~~~~~~~~~~~~~~~~~~  289 (318)
                      +.+...+....    ....+|+..|++.++..++.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~  211 (432)
T PRK10406        177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA  211 (432)
T ss_pred             HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence            76544432210    01268999998766655543

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.24  E-value=1.1e-10  Score=103.24  Aligned_cols=148  Identities=13%  Similarity=0.134  Sum_probs=100.8

Q ss_pred             ceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc------hhHHHHHH
Q psy4758         140 FDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD------NLVGAITC  213 (318)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  213 (318)
                      .+..+.+.+.+...++.+++.++.|+++||+|||+.+          ..+.++..++.++.....+      ...+.+..
T Consensus        53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~----------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r  122 (502)
T TIGR00887        53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY----------GMELIIMIIATVASGLSPGSSPKSVMATLCFWR  122 (502)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH----------HHHHHHHHHHHHHHHHccCcccchHHHHHHHHH
Confidence            4455677888889999999999999999999999976          5555555555555554433      12234444


Q ss_pred             HHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC-------------------Ccc
Q psy4758         214 LTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT-------------------SVS  273 (318)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~-------------------~~~  273 (318)
                      ++.+.+.+. ..+....+..|..|.+ |++++++.+....+|..+++.+...+.....                   ...
T Consensus       123 ~l~G~~~g~-~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (502)
T TIGR00887       123 FWLGVGIGG-DYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDY  201 (502)
T ss_pred             HHHHHHHhh-hhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcc
Confidence            455554443 4455566777777776 9999999999999999998888765432110                   013


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         274 QWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      +|+..+.+.++..++..+....+++
T Consensus       202 ~WR~~~~~~~ip~~i~~~~~~~lpE  226 (502)
T TIGR00887       202 MWRILIGFGAVPALLALYFRLTIPE  226 (502)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            7999997776666655554444443

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00901 2A0125 AmpG-related permease

Probab=99.24  E-value=8.2e-11  Score=99.49  Aligned_cols=159  Identities=16%  Similarity=0.137  Sum_probs=103.3

Q ss_pred             HHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH-----hhhcCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy4758         126 LLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI-----VAKQILSPTVSRKMWNTIGLWGSAAALVGL  200 (318)
Q Consensus       126 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~  200 (318)
                      .....|.++++ .|+|..+.|..... .+...+ .+++|+++||+     ||||.+         +..+.++.++....+
T Consensus         7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~---------l~~~~~~~~~~~~~l   74 (356)
T TIGR00901         7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSW---------LVLTQVLLLSLLLIL   74 (356)
T ss_pred             HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHH---------HHHHHHHHHHHHHHH
Confidence            44567778877 89999999988544 444444 88999999998     666643         234455555554444


Q ss_pred             HhcCchhH--HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCC----cc
Q psy4758         201 SFVGDNLV--GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTS----VS  273 (318)
Q Consensus       201 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~----~~  273 (318)
                      .+..+...  ......++.........+...++..|..|++ |+.+.++.....++|..+++.+.+.+.+..+.    ..
T Consensus        75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~  154 (356)
T TIGR00901        75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLIT  154 (356)
T ss_pred             HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence            44432221  1222222222333344455556666766555 99999999999999999999999988777321    12


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhh
Q psy4758         274 QWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      +|+..|++.+++.++..+.....
T Consensus       155 ~wr~~f~i~ai~~l~~~~~~~~~  177 (356)
T TIGR00901       155 LWGYIFFWTALLILPGLLVTLFL  177 (356)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHh
Confidence            39999988888776655544433

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.24  E-value=1.2e-10  Score=101.38  Aligned_cols=171  Identities=18%  Similarity=0.080  Sum_probs=112.3

Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH----hhhcCcchHHHHHHHHHHHHHH
Q psy4758         117 LCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI----VAKQILSPTVSRKMWNTIGLWG  192 (318)
Q Consensus       117 ~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----g~~~~~~~~~~r~~~~~~~~~~  192 (318)
                      +...........+++.|+.+.+|+++.++|.+.+...+...+..++.|+++||.    ||||..         +..+...
T Consensus         9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~---------i~~~~~~   79 (437)
T TIGR00792         9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPW---------LLIGAIP   79 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchh---------HHHhHHH
Confidence            344555667778899999998999999999999999999999999999999984    555543         3556666


Q ss_pred             HHHHHHHHHhcCchh-----H-HHHHHHHHHHHHhhhccccccccccccC--ccchhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758         193 SAAALVGLSFVGDNL-----V-GAITCLTLAIAINAGTYTGFLSNHLDLS--PNFAGTLMGFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       193 ~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~~~~~~g~  264 (318)
                      .+++..++...++..     . .....+..+.+.. .......+...+..  +++|++..++.+...++|+.+++.+.+.
T Consensus        80 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~  158 (437)
T TIGR00792        80 FSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYS-FVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLP  158 (437)
T ss_pred             HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHH-hhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666665555544321     1 1111222222222 23334444444544  3459999999888888888777666555


Q ss_pred             eeccCC---CccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         265 IVTDNT---SVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       265 l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      +....+   +..+|+..+.+.+++.++..+......
T Consensus       159 l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~  194 (437)
T TIGR00792       159 LVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGT  194 (437)
T ss_pred             HHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCC
Confidence            543211   235788888888877776665544433

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.22  E-value=2.3e-10  Score=100.83  Aligned_cols=170  Identities=16%  Similarity=0.143  Sum_probs=106.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeec-hhh-----hchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKS-NGF-----LSAAPYLAQWILILVFSWLADYIVAKQILSPTVSR  182 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~-~~~-----~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r  182 (318)
                      +....+..++-..-+..+....| ++.+.++.+..+ ...     ..+...++..+++++.|+++||+|||+.+      
T Consensus        18 ~~~~~~g~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l------   90 (490)
T PRK10642         18 ITAASLGNAMEWFDFGVYGFVAY-ALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL------   90 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH------
Confidence            33444555555544444444455 444445433222 111     13555677889999999999999999987      


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCchhH--------HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHH
Q psy4758         183 KMWNTIGLWGSAAALVGLSFVGDNLV--------GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANI  253 (318)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~  253 (318)
                          ..+.++.+++.++..+.++...        +...-++.+.+.++ ..+....+..|..|++ ||...++......+
T Consensus        91 ----~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~-~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~  165 (490)
T PRK10642         91 ----AITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGG-EYTGASIFVAEYSPDRKRGFMGSWLDFGSIA  165 (490)
T ss_pred             ----HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHh-hHHHHHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence                7788888888888888776542        23334444554443 4455566677777655 99999998887777


Q ss_pred             HHhHhhhhhheeec----cCCCccchHHHHHHHHHHHHHHH
Q psy4758         254 ASILGPLFVGFIVT----DNTSVSQWQTIFLIAAAIFFFGN  290 (318)
Q Consensus       254 g~~~~~~~~g~l~~----~~~~~~~~~~~~~~~~~~~~~~~  290 (318)
                      |..+++.+...+..    ......+|+..|++.+...+++.
T Consensus       166 G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~  206 (490)
T PRK10642        166 GFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGL  206 (490)
T ss_pred             HHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHH
Confidence            77777765543322    10112689999988765544433

>PRK15075 citrate-proton symporter; Provisional

Probab=99.21  E-value=3.2e-10  Score=98.50  Aligned_cols=163  Identities=12%  Similarity=0.097  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhc-hHH-----HHHHHHHHHHHHHhHHHHhhhcCcchHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLS-AAP-----YLAQWILILVFSWLADYIVAKQILSPTVSR  182 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~-~~~-----~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r  182 (318)
                      ....++..++...-...+....|.+.++ ++.++.+.+... +..     .+...++.++.|+++||+|||+.+      
T Consensus        17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l------   89 (434)
T PRK15075         17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL------   89 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH------
Confidence            4455666777777777777888877666 788776654332 221     222346789999999999999977      


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCchhH--------HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHH
Q psy4758         183 KMWNTIGLWGSAAALVGLSFVGDNLV--------GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANI  253 (318)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~  253 (318)
                          ..+..+..++..+..+.++...        +.+..++.+.+.+. ..+....+..|..|++ |++++++.+...++
T Consensus        90 ----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~-~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~  164 (434)
T PRK15075         90 ----IVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGV-ELGGVSVYLAEIATPGRKGFYTSWQSASQQV  164 (434)
T ss_pred             ----HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccc-cHHHHHHHHHhhCCcccchHHHHHHHHHHHH
Confidence                6677777777777777665431        12223333333322 2333445666777665 99999999988888


Q ss_pred             HHhHhhhhhheeeccC----CCccchHHHHHHHH
Q psy4758         254 ASILGPLFVGFIVTDN----TSVSQWQTIFLIAA  283 (318)
Q Consensus       254 g~~~~~~~~g~l~~~~----~~~~~~~~~~~~~~  283 (318)
                      |..+++.+++.+....    .+..+|+..|++..
T Consensus       165 g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~  198 (434)
T PRK15075        165 AVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGC  198 (434)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence            8877777766553211    01268999998644

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.21  E-value=2.4e-10  Score=111.09  Aligned_cols=156  Identities=12%  Similarity=0.063  Sum_probs=103.0

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccee--echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchH
Q psy4758         102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDI--KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPT  179 (318)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~  179 (318)
                      +.++++.++.+++..++...........+..++...++.+.  ...++..+...++.+++++++|+++||+|||+.+   
T Consensus         4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l---   80 (1146)
T PRK08633          4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVI---   80 (1146)
T ss_pred             chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHH---
Confidence            45677777777777777666555554444444444355543  3356777788888999999999999999999976   


Q ss_pred             HHHHHHHHHHHHHHHHHHHH---HHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHH
Q psy4758         180 VSRKMWNTIGLWGSAAALVG---LSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIAS  255 (318)
Q Consensus       180 ~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~  255 (318)
                             ..+.++..+..++   .....+...+.+..++.+.+ .+...+...++..+..|++ |++++|+.....++|.
T Consensus        81 -------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~-~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~  152 (1146)
T PRK08633         81 -------RIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQ-SAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAI  152 (1146)
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH-HHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHH
Confidence                   3333332222222   22223323233444444443 3445555566677777665 9999999999999999


Q ss_pred             hHhhhhhheeecc
Q psy4758         256 ILGPLFVGFIVTD  268 (318)
Q Consensus       256 ~~~~~~~g~l~~~  268 (318)
                      .+|+.+++++.+.
T Consensus       153 ~lg~~l~~~l~~~  165 (1146)
T PRK08633        153 LAGTALFSFLFES  165 (1146)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998765

>TIGR00898 2A0119 cation transport protein

Probab=99.19  E-value=4.8e-11  Score=105.77  Aligned_cols=150  Identities=15%  Similarity=0.172  Sum_probs=110.5

Q ss_pred             hhhhhhhhhhcce---eechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q psy4758         129 EMPSYINSVLQFD---IKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD  205 (318)
Q Consensus       129 ~~p~~l~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~  205 (318)
                      +.|...+| ++++   +.+.++..+...++.+++.++.|+++||+|||+.+          ..+.++..++.++..+.++
T Consensus       111 ~~~~i~~e-~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~----------~~~~~~~~i~~~~~~~~~~  179 (505)
T TIGR00898       111 FSSTIVTE-WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL----------LLSTLVTAVSGVLTAFSPN  179 (505)
T ss_pred             ccccEEEE-ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH----------HHHHHHHHHHHHHHHHccc
Confidence            44554444 8888   88899999999999999999999999999999876          5666777777767666666


Q ss_pred             hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758         206 NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA  284 (318)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  284 (318)
                      .....+..++.+.+. +...+....+..|..|++ |+.+.++......+|..++|.+...+.       +|+..+++.++
T Consensus       180 ~~~~~~~r~l~G~~~-~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-------~wr~~~~~~~i  251 (505)
T TIGR00898       180 YTVFLVFRLLVGMGI-GGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP-------DWRWLQLAVSL  251 (505)
T ss_pred             HHHHHHHHHHHHhhc-cchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHH
Confidence            554444444444443 334555556666777666 999999998888899888888876552       38888888887


Q ss_pred             HHHHHHHHHHhhc
Q psy4758         285 IFFFGNLIFLIFG  297 (318)
Q Consensus       285 ~~~~~~~~~~~~~  297 (318)
                      ..++..+..++++
T Consensus       252 ~~~~~~~~~~~~~  264 (505)
T TIGR00898       252 PTFLFFLLSWFVP  264 (505)
T ss_pred             HHHHHHHHHHhcC
Confidence            7776666655444

>KOG2615|consensus

Probab=99.17  E-value=8.6e-11  Score=95.19  Aligned_cols=118  Identities=18%  Similarity=0.173  Sum_probs=90.8

Q ss_pred             hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q psy4758         138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLA  217 (318)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (318)
                      .+-+...+|++.+.+.++.++.++.+|.++||+|||..+          .++.+..++...+++...+.......-+.  
T Consensus        63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvl----------l~c~~~va~s~ll~~~S~~F~afv~aR~l--  130 (451)
T KOG2615|consen   63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVL----------LACLIGVALSYLLWALSRNFAAFVLARFL--  130 (451)
T ss_pred             ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence            344567788999999999999999999999999999876          66777777777776665543111111222  


Q ss_pred             HHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758         218 IAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVT  267 (318)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~  267 (318)
                      .+..-.......++..|+.+++ |+.+++.++....+|-.+||.++|++..
T Consensus       131 ~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~  181 (451)
T KOG2615|consen  131 GGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ  181 (451)
T ss_pred             hhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence            2333345566677788888777 9999999999999999999999999987

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=99.14  E-value=1.1e-10  Score=100.56  Aligned_cols=280  Identities=17%  Similarity=0.138  Sum_probs=145.5

Q ss_pred             CCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccC
Q psy4758           8 MERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLV   87 (318)
Q Consensus         8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (318)
                      ++||...+.......+|.+++..++|.+.+. .++|..|.+.+++..+..+...+..+|.++.+........+...+.. 
T Consensus       120 ~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~-~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~-  197 (433)
T PF03092_consen  120 ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS-FGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCL-  197 (433)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhhhhc-CCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchh-
Confidence            3488999999999999999999999999998 89999999998888877666666666522211100000000000000 


Q ss_pred             ccccccccCCcchhhhhcchhHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhhc---ceeechhhhchHHHHHHHHHHHHH
Q psy4758          88 HSSTVSSSMKVPWKAILTSLPVWAVLI-THLCQNWGYWTLLTEMPSYINSVLQ---FDIKSNGFLSAAPYLAQWILILVF  163 (318)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~  163 (318)
                        ....++.....++.+++|.+|...+ ..++............-.+..+..+   +++...+.+..+..++.++|..+.
T Consensus       198 --~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y  275 (433)
T PF03092_consen  198 --FGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLY  275 (433)
T ss_pred             --hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence              0000222234556677787776665 2222221111111101111223344   777777766655566666666665


Q ss_pred             HHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc---------CchhHHHHHHHHHHHHHhhhccccccccccc
Q psy4758         164 SWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV---------GDNLVGAITCLTLAIAINAGTYTGFLSNHLD  234 (318)
Q Consensus       164 g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (318)
                      .+...+..-|+++         .....+.....+.-+.+.         ++. ...+.--.+.................+
T Consensus       276 ~~~~~~~~~R~~~---------~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~-~f~lgd~~l~~~~~~i~~mP~lvl~a~  345 (433)
T PF03092_consen  276 RKYFSNWSWRRIF---------VVTTLVSVLASLFDLLLVTRWNLDLGIPDQ-WFALGDTILEEVIGMIAFMPSLVLAAR  345 (433)
T ss_pred             HHHHhCCCHHHHH---------HHHHHHHHHHhcccEEEEEEEeeeeCcCCe-EEEEEhHHHHHHHHHHHHHHHHHHHHH
Confidence            5544444444432         222222222222111111         111 111111112222222223333334445


Q ss_pred             cCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCC----ccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758         235 LSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTS----VSQWQTIFLIAAAIFFFGNLIFLIFGTSEV  301 (318)
Q Consensus       235 ~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (318)
                      .-|+. .|+.+++..++.|+|..++..++..+.+..+.    ..+.....++..++.++.+.+..+++++++
T Consensus       346 lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~  417 (433)
T PF03092_consen  346 LCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR  417 (433)
T ss_pred             HCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence            66665 99999999999999999999888887665321    122334444445555555555545555433

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.14  E-value=6.2e-10  Score=95.36  Aligned_cols=175  Identities=12%  Similarity=0.048  Sum_probs=111.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhh--chHHHHHHHHHHHHH-HHhHHHHhhhcCcchHHHHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFL--SAAPYLAQWILILVF-SWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~-g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      +..+...++.+...+......+|.++++ .|.|..+.|.+  .........+.+++. ++..||.|+||..         
T Consensus         3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~---------   72 (390)
T TIGR02718         3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSW---------   72 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhH---------
Confidence            3455667788888888889999999999 79999999997  355677787788777 4478999988864         


Q ss_pred             HHHHHHH-HHHHHHHHH-h--cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhh
Q psy4758         186 NTIGLWG-SAAALVGLS-F--VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPL  260 (318)
Q Consensus       186 ~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~  260 (318)
                       ++.+.+ .......+. .  ..+...+..........+.....+.......+..+++ ++...+.......+|..+++.
T Consensus        73 -i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~  151 (390)
T TIGR02718        73 -VLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGA  151 (390)
T ss_pred             -HHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence             222211 111122222 1  1111112222222222233333333443433434443 677777777766788888888


Q ss_pred             hhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         261 FVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       261 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      ..+++.+.    .+|+..|++.+++.++..+......+
T Consensus       152 ~~~~l~~~----~gw~~~f~~~a~l~~~~~~~~~~~~~  185 (390)
T TIGR02718       152 GTLVLFGK----FGQRPAFLLVACVPLASLVCVLWLKD  185 (390)
T ss_pred             HHHHHHHH----hCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            88888888    78999999999887776666555443

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>KOG2532|consensus

Probab=99.12  E-value=1.8e-10  Score=99.32  Aligned_cols=153  Identities=11%  Similarity=0.092  Sum_probs=121.6

Q ss_pred             hhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--HHHHHH
Q psy4758         137 VLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--GAITCL  214 (318)
Q Consensus       137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  214 (318)
                      .+.+++.+-+++.+....+.+++.+.+|++.||+|.|+++          ..+.++.++..++.+...+...  +.+.-+
T Consensus        67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~----------~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~  136 (466)
T KOG2532|consen   67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF----------FISGLISALLTLLTPLAASIGFYLLLVLRF  136 (466)
T ss_pred             eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH----------HHHHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence            4778889999999999999999999999999999999987          6677777777777776654332  455666


Q ss_pred             HHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         215 TLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      +.|.+.+...+........-.+|++|++..++.....++|..++-++.|.+.+..   .||+.+|++.+++.++..++..
T Consensus       137 lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~---~GW~sifY~~g~~g~i~~~~w~  213 (466)
T KOG2532|consen  137 LQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESS---LGWPSIFYVFGIVGLIWFILWF  213 (466)
T ss_pred             HhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC---CCCchHHHHHHHHHHHHHHHHH
Confidence            6776655555444454555555666999999999999999999999999998883   7999999999999888877777


Q ss_pred             hhcccccC
Q psy4758         295 IFGTSEVQ  302 (318)
Q Consensus       295 ~~~~~~~~  302 (318)
                      .+..++++
T Consensus       214 ~~~~d~P~  221 (466)
T KOG2532|consen  214 LFYSDSPS  221 (466)
T ss_pred             HHhcCCcc
Confidence            66554433

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.10  E-value=1.4e-09  Score=95.50  Aligned_cols=176  Identities=14%  Similarity=0.028  Sum_probs=110.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH----HhhhcCcchHHHHHHHH
Q psy4758         111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY----IVAKQILSPTVSRKMWN  186 (318)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~r~~~~  186 (318)
                      ...+..+........+..|++.|+.+..|+++..+|.+....-+...+..++.|+++||    +||||..         +
T Consensus        10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~---------i   80 (473)
T PRK10429         10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPW---------I   80 (473)
T ss_pred             hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchh---------H
Confidence            34455555667777788999999999999999999999999999999999999999995    5887654         3


Q ss_pred             HHHHHHHHHHHHHHHhcCch--h-H--HHHHHHHHHHHHhhhccccccccccccC--ccchhhHHHHHHHHHHHHHhHhh
Q psy4758         187 TIGLWGSAAALVGLSFVGDN--L-V--GAITCLTLAIAINAGTYTGFLSNHLDLS--PNFAGTLMGFTNGCANIASILGP  259 (318)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~--~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~~~  259 (318)
                      ..+.+..+++..++...++.  . .  .......+...+.........+...|+.  +++|.+..+......++|+.+.+
T Consensus        81 l~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~  160 (473)
T PRK10429         81 LIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTA  160 (473)
T ss_pred             hhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45666666665555443311  1 1  1111222222223334455555666665  34499988887777777766665


Q ss_pred             hhhheeeccCC---CccchHHHHHHHHHHHHHHHHHHHh
Q psy4758         260 LFVGFIVTDNT---SVSQWQTIFLIAAAIFFFGNLIFLI  295 (318)
Q Consensus       260 ~~~g~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
                      .+...+.+..+   +..+|.....+.+++.+++.+....
T Consensus       161 ~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~  199 (473)
T PRK10429        161 GFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLR  199 (473)
T ss_pred             HHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHc
Confidence            55443322211   1135666666666655555444443

>TIGR00889 2A0110 nucleoside transporter

Probab=99.10  E-value=1.5e-09  Score=93.67  Aligned_cols=164  Identities=16%  Similarity=0.140  Sum_probs=100.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhh-hcCcchHHHHHHHHHHH
Q psy4758         111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVA-KQILSPTVSRKMWNTIG  189 (318)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~~r~~~~~~~  189 (318)
                      .+.+..++.+..+.....+++.+++++.|++..+.|++.+...++.++++++.|+++||+|+ |+.+          .++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~----------~~~   75 (418)
T TIGR00889         6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVY----------AVC   75 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH----------HHH
Confidence            35667778888888888999999988899999999999999999999999999999999976 4443          444


Q ss_pred             HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccc----cccc----ccCccc-hhhHHHHHHHHHHHHHhHhhh
Q psy4758         190 LWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFL----SNHL----DLSPNF-AGTLMGFTNGCANIASILGPL  260 (318)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~-~~~~~g~~~~~~~~g~~~~~~  260 (318)
                      .++..+......+.++.+.+.......+.+.... .+...    ....    |...+. |.+..|      .+|..++|.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~  148 (418)
T TIGR00889        76 HFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPT-IALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMW  148 (418)
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccH-HHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHH
Confidence            5555555555555544333333333333322211 11111    1111    212222 444444      367888888


Q ss_pred             hhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         261 FVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       261 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      +.+.+...    ..+ ..|++.++..++..++....
T Consensus       149 l~g~l~~~----~~~-~~f~~~~~~~~~~~~~~~~~  179 (418)
T TIGR00889       149 AVSLLDIE----LSN-IQLYITAGSSALLGVFALTL  179 (418)
T ss_pred             HHHHhccc----chh-HHHHHHHHHHHHHHHHHhcC
Confidence            88877222    223 34555555555554443333

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.09  E-value=5.7e-10  Score=96.73  Aligned_cols=175  Identities=15%  Similarity=0.036  Sum_probs=124.4

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHH----HHhhhcCcchHHHHHHHHHHHHH
Q psy4758         116 HLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLAD----YIVAKQILSPTVSRKMWNTIGLW  191 (318)
Q Consensus       116 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~~~~~~~r~~~~~~~~~  191 (318)
                      .+...........+++.|+.+..|+++...|.+.....+...+..++.|.++|    |+||||..         +..+.+
T Consensus        10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~---------~l~g~i   80 (428)
T PF13347_consen   10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPW---------ILIGAI   80 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceE---------eehhhH
Confidence            34555566667778899999989999999999999999999999999999999    78888876         356667


Q ss_pred             HHHHHHHHHHhc-C-chh----H-HHHHHHHHHHHHhhhccccccccccccCcc--chhhHHHHHHHHHHHHHhHhhhhh
Q psy4758         192 GSAAALVGLSFV-G-DNL----V-GAITCLTLAIAINAGTYTGFLSNHLDLSPN--FAGTLMGFTNGCANIASILGPLFV  262 (318)
Q Consensus       192 ~~~~~~~~~~~~-~-~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~~~~~~  262 (318)
                      ..+++..++... + +..    . .......+.............+...|..++  +|.+..+.......+|..+...+.
T Consensus        81 ~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~  160 (428)
T PF13347_consen   81 LLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLA  160 (428)
T ss_pred             HHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence            777777666655 3 111    1 112222222333344455566667777764  499999999998999888777777


Q ss_pred             heeeccCCCc---cchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         263 GFIVTDNTSV---SQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       263 g~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      +.+.+..++.   .+|.....+.+++.+++.++.....|+
T Consensus       161 ~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke  200 (428)
T PF13347_consen  161 PILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE  200 (428)
T ss_pred             hhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence            7777654432   268888888888877777666665554

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.08  E-value=2.3e-09  Score=91.80  Aligned_cols=128  Identities=20%  Similarity=0.223  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--------HHHHHHHHHHHHhhhcc
Q psy4758         154 LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--------GAITCLTLAIAINAGTY  225 (318)
Q Consensus       154 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~  225 (318)
                      +...+++++.|+++||+|||+.+          ..+.++..++..+..+.++...        ..+..++.+.+. +...
T Consensus        46 ~~~~i~~~~~G~l~dr~g~r~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~-~~~~  114 (394)
T TIGR00883        46 LARPLGAIVFGHFGDRIGRKKTL----------VITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSL-GGEW  114 (394)
T ss_pred             HHhhhHHHHhhhhhhhhhhHHHH----------HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhc-cccc
Confidence            33456889999999999999976          6677777777777776665431        122223333322 2333


Q ss_pred             ccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC----CccchHHHHHHHHHHHHHHHHH
Q psy4758         226 TGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT----SVSQWQTIFLIAAAIFFFGNLI  292 (318)
Q Consensus       226 ~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~  292 (318)
                      +....+..|..|++ |+...++.+....+|..+++.+.+.+.+..+    ...+|+..|.+.+++.+++...
T Consensus       115 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  186 (394)
T TIGR00883       115 GGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL  186 (394)
T ss_pred             cccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence            44455566666555 9999999999999999999887665532110    1257898888776665554443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK09669 putative symporter YagG; Provisional

Probab=99.08  E-value=8.6e-10  Score=96.12  Aligned_cols=175  Identities=7%  Similarity=-0.035  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH----HhhhcCcchHHHHHHHHH
Q psy4758         112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY----IVAKQILSPTVSRKMWNT  187 (318)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~r~~~~~  187 (318)
                      ..+..+........+..+++.|+.+++|+++.++|.+....-+...+..++.|+++||    +||||..         +.
T Consensus        14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~---------il   84 (444)
T PRK09669         14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPY---------LL   84 (444)
T ss_pred             hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchh---------HH
Confidence            3344444555566778889999999999999999999999999999999999999999    5555543         34


Q ss_pred             HHHHHHHHHHHHHHhcCchh-----H-HHHHHHHHHHHHhhhccccccccccccCc--cchhhHHHHHHHHHHHHHhHhh
Q psy4758         188 IGLWGSAAALVGLSFVGDNL-----V-GAITCLTLAIAINAGTYTGFLSNHLDLSP--NFAGTLMGFTNGCANIASILGP  259 (318)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~~~  259 (318)
                      .+.+..++...+....++..     . ..+..++...+.. .......+...|..+  ++|.+..+......++|+.+++
T Consensus        85 ~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t-~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~  163 (444)
T PRK09669         85 WFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYT-AINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVS  163 (444)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHH-hhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45555555554444443211     1 2222222333333 344445556656554  4488888888888888888777


Q ss_pred             hhhheeeccCC---CccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         260 LFVGFIVTDNT---SVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       260 ~~~g~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      .+...+....+   ...+|...+.+.+++.++..+..+..
T Consensus       164 ~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~  203 (444)
T PRK09669        164 VIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFM  203 (444)
T ss_pred             HHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence            65444333221   12467777777776666655544443

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.07  E-value=2.6e-09  Score=90.95  Aligned_cols=138  Identities=20%  Similarity=0.110  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758         111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL  190 (318)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~  190 (318)
                      .+...++++++.+.....++|.|+++ .|+|..|+|.+.+...+..+++.+++|.++||.++++-+         ..+..
T Consensus         6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~---------l~~~~   75 (400)
T PF03825_consen    6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRI---------LALLS   75 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHH---------HHHHH
Confidence            35566777788888888999999999 899999999999999999999999999999998754422         13444


Q ss_pred             HHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhh
Q psy4758         191 WGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPL  260 (318)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~  260 (318)
                      ++.++.+......++.+......+.... +.....+...+...+..+ +++.-+|-.-..+.+|-.++..
T Consensus        76 l~~~~~~~~~~~~~~f~~~~~~~~l~~~-~~~p~~pl~dsi~~~~~~-~~~~~YG~iRlwGSiGf~~~~~  143 (400)
T PF03825_consen   76 LLSALALLLLAFSSSFWWLFVIMLLFSF-FFSPTMPLSDSIALSYLG-DRGKDYGRIRLWGSIGFIVAAL  143 (400)
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHHH-HHccHHHHHHHHHHHHcc-cccCCCCcchhhhhHHHHHHHH
Confidence            5555555555555444433333333322 223333333333333222 2344455555555555555533

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.07  E-value=3.6e-09  Score=86.87  Aligned_cols=163  Identities=17%  Similarity=0.121  Sum_probs=116.3

Q ss_pred             HHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy4758         124 WTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV  203 (318)
Q Consensus       124 ~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~  203 (318)
                      ...+-.+-+.+++.++.+..+++++......+..+.++..+++.+|+|.|+.+          +.++.+.+++..++.-.
T Consensus        29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi----------~lgL~l~avg~~lF~pA   98 (422)
T COG0738          29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI----------VLGLLLYAVGAALFWPA   98 (422)
T ss_pred             hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH----------HHHHHHHHHHHHHHhhh
Confidence            34444455566667999999999999999999999999999999999999977          78888888888877533


Q ss_pred             Cch---hHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC----------
Q psy4758         204 GDN---LVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN----------  269 (318)
Q Consensus       204 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------  269 (318)
                      .+.   ......++.++.+.+. .-...+.++..+.+++ ...-+.+...+..+|+.++|.+++.+..+.          
T Consensus        99 a~~~~y~~FL~~lFila~Gi~~-LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~  177 (422)
T COG0738          99 ASSKSYGFFLVALFILASGIGL-LETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQI  177 (422)
T ss_pred             hhhhhHHHHHHHHHHHHhhhHH-HHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence            322   2133334445554433 4455555666666665 788899999999999999999999988731          


Q ss_pred             -----CCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         270 -----TSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       270 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                           .+...++..+...+...++..+.....+
T Consensus       178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k  210 (422)
T COG0738         178 LAIKGADASSVQFPYLILAGLLVLLAVLILLSK  210 (422)
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence                 1113456677766666665555554443

>KOG3762|consensus

Probab=98.99  E-value=8.5e-09  Score=87.50  Aligned_cols=180  Identities=16%  Similarity=0.144  Sum_probs=135.1

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHH
Q psy4758         102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVS  181 (318)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  181 (318)
                      .++.++....+.+...+...+...+.+++=-+++| .+..+..-|........+-++.-++.+++.+|+|+-+++     
T Consensus       366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~-----  439 (618)
T KOG3762|consen  366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM-----  439 (618)
T ss_pred             HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee-----
Confidence            45677777777777777777777777777667777 677777778777777778888889999999999999988     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHH-HHHHHhHhh
Q psy4758         182 RKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGC-ANIASILGP  259 (318)
Q Consensus       182 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~-~~~g~~~~~  259 (318)
                           .+++.+..+=++.+.+..+.|..+.+-++-+. ..+..+....++++.+.|.+ ++++.++.... ..+|-.+|.
T Consensus       440 -----~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgi-t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs  513 (618)
T KOG3762|consen  440 -----YLGLACNVGRFLYYSYLQNPWMVLPIEILQGI-THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS  513 (618)
T ss_pred             -----eehhhHHHHHHHHHHHhcCchheeeHHHHHHH-HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence                 66777778888888888887753333344444 34556677777777777777 99999998555 568888999


Q ss_pred             hhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         260 LFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       260 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      +++|.+.+.    .+-+..|...++.+++.+++...+.
T Consensus       514 lIGG~~v~~----fg~~ttf~~~giAcl~~l~~~~~iq  547 (618)
T KOG3762|consen  514 LIGGFVVER----FGARTTFRIFGIACLVTLALFISIQ  547 (618)
T ss_pred             hhhhhhhee----ehhHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999998    6667788777777666665555443

>KOG2504|consensus

Probab=98.96  E-value=3.3e-09  Score=92.73  Aligned_cols=173  Identities=10%  Similarity=0.075  Sum_probs=130.9

Q ss_pred             HHHHHHHHHHHHHHHHH----HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758         110 WAVLITHLCQNWGYWTL----LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       110 ~~~~~~~~~~~~~~~~~----~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      |.+.+..+......+++    ..+.+.+.++ ++.+..+++++.++...+..+..++.+.+.||+|.|.+.         
T Consensus        45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~-f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~---------  114 (509)
T KOG2504|consen   45 WVVVFASFLVNLSTDGLINSFGLLFEELMDY-FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVM---------  114 (509)
T ss_pred             eeeeHhHHHHHHhhhcchheehhhHHHHHHH-hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHH---------
Confidence            44444554444444433    3334444444 888888899999999999999999999999999999876         


Q ss_pred             HHHHHHHHHHHHHHHHhcCchhHHHH-HHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758         186 NTIGLWGSAAALVGLSFVGDNLVGAI-TCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~  264 (318)
                       +.+.++..+++++..+..+.+.+++ ..+..|.+++. .+..........++++|+.+.|+......+|.++-|.+...
T Consensus       115 -i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~-~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~  192 (509)
T KOG2504|consen  115 -IAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGL-IYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKY  192 (509)
T ss_pred             -HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchh-hhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence             8888999999999999887654333 33344444333 44445555557888899999999999999999999999999


Q ss_pred             eeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         265 IVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      +.+.    .+|+..++..+.+.+-..+.....++
T Consensus       193 l~~~----~G~r~~~l~~~~~~l~~~~~~~~~rp  222 (509)
T KOG2504|consen  193 LLSK----YGWRGALLIFGGISLNVLVAGALLRP  222 (509)
T ss_pred             HHHH----hCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999    89999999999888777666666655

>PRK11462 putative transporter; Provisional

Probab=98.95  E-value=1.4e-08  Score=88.67  Aligned_cols=175  Identities=10%  Similarity=-0.048  Sum_probs=113.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH----hhhcCcchHHHHHHHHH
Q psy4758         112 VLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI----VAKQILSPTVSRKMWNT  187 (318)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----g~~~~~~~~~~r~~~~~  187 (318)
                      ..+.-+..+..+.....|+..|+.+..|+++..+|.+..+.-+...+.-++.|.++||.    ||||..         +.
T Consensus        14 Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~---------il   84 (460)
T PRK11462         14 YGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPW---------VL   84 (460)
T ss_pred             hccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchh---------Hh
Confidence            33444455666677778999999999999999999999999999999999999999975    555543         45


Q ss_pred             HHHHHHHHHHHHHHhcCchh----H-HHHHHHHHHHHHhhhccccccccccccCcc--chhhHHHHHHHHHHHHHhHhhh
Q psy4758         188 IGLWGSAAALVGLSFVGDNL----V-GAITCLTLAIAINAGTYTGFLSNHLDLSPN--FAGTLMGFTNGCANIASILGPL  260 (318)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~~~~  260 (318)
                      .+.+..+++..++...++..    . .......+.............+...++.++  +|++..+......++|+.+++.
T Consensus        85 ~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~  164 (460)
T PRK11462         85 FGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTV  164 (460)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56566666665555444211    1 122222222223333445555566666554  4999999999999988887777


Q ss_pred             hhheeeccCCC---ccchHHHHHHHHHHHHHHHHHHHh
Q psy4758         261 FVGFIVTDNTS---VSQWQTIFLIAAAIFFFGNLIFLI  295 (318)
Q Consensus       261 ~~g~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
                      +...+.+..++   ..+|.....+.+++.+++..+...
T Consensus       165 ~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~  202 (460)
T PRK11462        165 LMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF  202 (460)
T ss_pred             HHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence            65554443221   135666666666655555544443

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.94  E-value=5.6e-09  Score=82.09  Aligned_cols=138  Identities=16%  Similarity=0.067  Sum_probs=92.4

Q ss_pred             HHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH
Q psy4758         119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV  198 (318)
Q Consensus       119 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~  198 (318)
                      .....|.+..|.|..-+ .+|+|++|...+.....++..+| ++.|.+.|++|.+..+          .++.+...++..
T Consensus        14 ~~Gt~Y~Fs~yS~~Lk~-~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l----------~iG~~~~~~GY~   81 (250)
T PF06813_consen   14 CSGTTYTFSAYSPQLKS-RLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVL----------LIGAVLGFVGYG   81 (250)
T ss_pred             hcCcccchhhhhHHHHH-HhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHH----------HHHHHHHHHHHH
Confidence            34455666677776655 49999999999988888888764 8889999999999866          566666666665


Q ss_pred             HHHhcCch-----hHHHHHHH-HHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         199 GLSFVGDN-----LVGAITCL-TLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       199 ~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      .....-+.     ..+.+..+ .++................+.+|++||++.|+.-....+++++-..+...+.+.
T Consensus        82 ~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~  157 (250)
T PF06813_consen   82 LLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD  157 (250)
T ss_pred             HHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence            55433211     11222222 222111122222333334466899999999999999999999888887777665

>TIGR00788 fbt folate/biopterin transporter

Probab=98.92  E-value=1.8e-08  Score=88.17  Aligned_cols=181  Identities=12%  Similarity=0.018  Sum_probs=112.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWN  186 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~  186 (318)
                      +....+...++..... ......++.++++.+|+++.+.+.+.+...+...+-.+ +|.++||++..     |..|++.+
T Consensus        26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~-----G~rRr~~l   98 (468)
T TIGR00788        26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLF-----GYTKRWYL   98 (468)
T ss_pred             hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCC-----CccchHHH
Confidence            3344555567777777 77777888888887999999998888888888888554 99999999610     11122333


Q ss_pred             HHHHHHH-HHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhh---HHHHHHHHHHHHHhHhhhhh
Q psy4758         187 TIGLWGS-AAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGT---LMGFTNGCANIASILGPLFV  262 (318)
Q Consensus       187 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~g~~~~~~~~  262 (318)
                      .++.++. .+.+..+...++.......++++........-........|..+++++.   ..+......++|..+++.+.
T Consensus        99 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~  178 (468)
T TIGR00788        99 VLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLG  178 (468)
T ss_pred             HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHH
Confidence            4554444 2333333332332222332233333333333344555555555544333   34444455668999999999


Q ss_pred             heeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         263 GFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       263 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      |.+.+.    .+|+..|++.+++.++..+...+.++
T Consensus       179 G~l~~~----~~~~~~f~~~a~l~ll~~~~~~~~~E  210 (468)
T TIGR00788       179 GPLLDK----TLTRILFLITAALLLLQLFVSNLSKE  210 (468)
T ss_pred             HHHHHh----cCcchHHHHHHHHHHHHHHHHHhccc
Confidence            999888    68999998888887777444444443

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.90  E-value=5.4e-08  Score=82.85  Aligned_cols=183  Identities=13%  Similarity=0.098  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHH
Q psy4758         111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGL  190 (318)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~  190 (318)
                      .....-+.....+.....|+..|+.|+.|+++..+|.++.+.=+..++.-++.|.++||..+|+--     ||+++..+.
T Consensus        16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr-----fRP~lL~g~   90 (467)
T COG2211          16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGR-----FRPWLLWGA   90 (467)
T ss_pred             hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccc-----ccHHHHHHh
Confidence            344556666777788889999999999999999999999999999999999999999976544322     344456666


Q ss_pred             HHHHHHHHHHHhcCch-----hH-HHHHHHHHHHHHhhhccccccccccccC--ccchhhHHHHHHHHHHHHHhHhhhhh
Q psy4758         191 WGSAAALVGLSFVGDN-----LV-GAITCLTLAIAINAGTYTGFLSNHLDLS--PNFAGTLMGFTNGCANIASILGPLFV  262 (318)
Q Consensus       191 ~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~~~~~~  262 (318)
                      +..++...+....++.     .. ..+..++.+.+ .......+.+...+..  |++|.+..+.-....++|+.+...+.
T Consensus        91 ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~-YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~  169 (467)
T COG2211          91 IPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLG-YTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLF  169 (467)
T ss_pred             HHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHH-HHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666666666555531     11 22223333333 3334455555555554  44599999999999999888777777


Q ss_pred             heeeccCCC---ccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         263 GFIVTDNTS---VSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       263 g~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      +.+....++   ..+|.....+.+++.++..+.++.-.++
T Consensus       170 ~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~E  209 (467)
T COG2211         170 PPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKE  209 (467)
T ss_pred             HHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            666654332   2477777777776666666555554443

>KOG0254|consensus

Probab=98.88  E-value=5e-08  Score=86.57  Aligned_cols=139  Identities=14%  Similarity=0.143  Sum_probs=108.4

Q ss_pred             chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhh
Q psy4758         144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAG  223 (318)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (318)
                      +.+++.+...++..+++++.|+++|++|||+.+          ..+.+...++.++.....+...+.+.-++.+.+.+. 
T Consensus        90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l----------~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~-  158 (513)
T KOG0254|consen   90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL----------LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGG-  158 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhh-
Confidence            347899999999999999999999999999987          778888888888888887666566666777766544 


Q ss_pred             ccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         224 TYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       224 ~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      .......+..|..|.+ ||...+..+....+|..++ .+.+...+.. . .+|+..+.+..+..++..+..++.
T Consensus       159 ~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~-~-~~Wr~~~~~~~i~~~~~~~~~~~~  229 (513)
T KOG0254|consen  159 ASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKV-Y-AGWRIPLGLALIPAVILALGMLFL  229 (513)
T ss_pred             hhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccC-C-ccHHHHHHHHHHHHHHHHHHHHhC
Confidence            4567777888999987 9999999999999887777 6666665542 1 489988887777777766664443

>KOG0255|consensus

Probab=98.87  E-value=3.4e-09  Score=94.36  Aligned_cols=139  Identities=16%  Similarity=0.103  Sum_probs=109.9

Q ss_pred             hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q psy4758         138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLA  217 (318)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (318)
                      .+.+.....+..+...++..+|++++|.++||+|||+++          ..++++..++-+...+.++.....+.-++.+
T Consensus       113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~----------~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G  182 (521)
T KOG0255|consen  113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVL----------LVSLLLFIIFGILTAFAPNYWMFLIFRFLSG  182 (521)
T ss_pred             eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHH----------HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence            556667777888889999999999999999999999987          7788888888888888888776666677777


Q ss_pred             HHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHH
Q psy4758         218 IAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIF  293 (318)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (318)
                      .+..+..........+-..|++|+.+..+ ......++.+++...+++..      +|+..+++..+..++..++.
T Consensus       183 ~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------~Wr~~~~~~~~~~~~~~~~~  251 (521)
T KOG0255|consen  183 FFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------DWRWLFWIISIPSGLFLLLW  251 (521)
T ss_pred             hhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------hHHHHHHHHHHHHHHHHHHH
Confidence            77666554444444444445559999999 88888889999999888866      58999998888877766663

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=98.79  E-value=3.2e-07  Score=77.83  Aligned_cols=288  Identities=14%  Similarity=0.135  Sum_probs=144.1

Q ss_pred             CccCCCC--CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCC--
Q psy4758           2 SKWAPPM--ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANS----PAQHPF--   73 (318)
Q Consensus         2 ~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~----~~~~~~--   73 (318)
                      +|.+|++  +|-..++++.++.++|+.++|.+.+++.+. .||+..|...++-..+. ++.+...|..    +..++.  
T Consensus       143 g~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~-~g~~~gF~~aavGm~~g-l~~f~~~~r~~~~~~~~~~~~~  220 (498)
T COG3104         143 GELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN-YGWHVGFGLAAVGMIIG-LVIFLLGRRHVKGIGGVPDPNP  220 (498)
T ss_pred             HHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh-hCHHHHHHHHHHHHHHH-HHHHHHccchhcCCCCCCCccc
Confidence            4566654  478889999999999999999999999999 99999999877655544 4444443321    111111  


Q ss_pred             CChhHhhh---------hhh----ccCccccc----------c---ccCCcchhhhhcc-hhHHHHHHHHHHHHHHHHHH
Q psy4758          74 ISLEERIY---------IET----SLVHSSTV----------S---SSMKVPWKAILTS-LPVWAVLITHLCQNWGYWTL  126 (318)
Q Consensus        74 ~~~~~~~~---------~~~----~~~~~~~~----------~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  126 (318)
                      .+..+...         ...    ....+.-.          +   -.+.....+...+ ++.+..+. .+.....++..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~-Lfl~~~iFW~~  299 (498)
T COG3104         221 LSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIP-LFLFAVIFWAL  299 (498)
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHH-HHHHHHHHHHH
Confidence            01000000         000    00000000          0   0000000010011 22222221 12222222222


Q ss_pred             ----Hhhhhhhhhh----h-hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhc--CcchHHHHHHHHHHHHHHHHH
Q psy4758         127 ----LTEMPSYINS----V-LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQ--ILSPTVSRKMWNTIGLWGSAA  195 (318)
Q Consensus       127 ----~~~~p~~l~~----~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~--~~~~~~~r~~~~~~~~~~~~~  195 (318)
                          .+-+..|..+    . +|++ ....+..+...+.-++.+++..++-.+.++++  ....   +|  ..+++.+++.
T Consensus       300 ~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~---~K--FalGl~l~g~  373 (498)
T COG3104         300 YEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTP---IK--FALGLILAGL  373 (498)
T ss_pred             HHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcc---hH--HHHHHHHHHH
Confidence                2223333322    1 2222 33456667777777888888888888865553  1111   11  1345555555


Q ss_pred             HHHHHHhc-------Cch-hH-HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         196 ALVGLSFV-------GDN-LV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       196 ~~~~~~~~-------~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      +++++...       ++. +. +.+....+....-.+..+.-........|+. .+..+++.......+..++..+.+.-
T Consensus       374 ~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~  453 (498)
T COG3104         374 GFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLT  453 (498)
T ss_pred             HHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccc
Confidence            55444332       111 11 3333333333334455666666666777777 88888887777777777766666632


Q ss_pred             ecc--CCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         266 VTD--NTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       266 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      .+.  ..+.......|..++...++..+......+
T Consensus       454 ~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~  488 (498)
T COG3104         454 AVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSP  488 (498)
T ss_pred             cccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence            211  011134556677777666665555544433

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=98.78  E-value=1.6e-06  Score=73.97  Aligned_cols=247  Identities=13%  Similarity=0.019  Sum_probs=145.3

Q ss_pred             CCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhc----CCCCCCCCCChhHhhh
Q psy4758           6 PPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGA----NSPAQHPFISLEERIY   81 (318)
Q Consensus         6 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~   81 (318)
                      +++++.+.++.+.-.=-+.-+++|++.|.+... .+.+....+.++..++...+=++++.    ..|+-+.+.++++.+.
T Consensus       143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~-~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~  221 (432)
T PF06963_consen  143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTF-ASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESES  221 (432)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccc
Confidence            345667777777777788899999999999887 88888888877777776555443332    2222111111111000


Q ss_pred             hhhc---cCccccc---------cccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhc
Q psy4758          82 IETS---LVHSSTV---------SSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLS  149 (318)
Q Consensus        82 ~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~  149 (318)
                      .++.   .++++..         -+....+|+..+++|.+.... ...+.++...++...+..|+.+ .|+++...|.+-
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~-alalLY~TVLsf~~lmt~yl~~-~G~s~~~igi~R  299 (432)
T PF06963_consen  222 SSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASF-ALALLYFTVLSFGGLMTAYLKS-QGYSPSVIGIFR  299 (432)
T ss_pred             cccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHH-HHHHHHHHHhcCcHHHHHHHHH-CCCCHHHHHHHH
Confidence            0000   0000000         012234566677777555444 4444444466677888889988 599999999999


Q ss_pred             hHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCch-hHHHHHHHHHH-----HHHhhh
Q psy4758         150 AAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDN-LVGAITCLTLA-----IAINAG  223 (318)
Q Consensus       150 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~  223 (318)
                      +...+.++.++++..++.+|+|..|.-..+      ...-..+..++...+....+. .......++.+     .|..+.
T Consensus       300 ~~gav~Gl~gT~~~p~l~~riGlvr~G~~~------l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~f  373 (432)
T PF06963_consen  300 GLGAVFGLLGTWVYPWLMKRIGLVRAGLWS------LWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSF  373 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchhhHHHH------HHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999977654221      112222222233233222222 11111222222     233333


Q ss_pred             ccccccccccccCccchhhHHHHHHHHHHHHHhHhhhh
Q psy4758         224 TYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLF  261 (318)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~  261 (318)
                      -........+++++++||+..|+-+..+++...+.-.+
T Consensus       374 DL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~  411 (432)
T PF06963_consen  374 DLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL  411 (432)
T ss_pred             hHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence            33444444445555569999999999999887655444

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PRK09848 glucuronide transporter; Provisional

Probab=98.75  E-value=2.2e-07  Score=81.22  Aligned_cols=63  Identities=10%  Similarity=0.063  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhh
Q psy4758         111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAK  173 (318)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~  173 (318)
                      ...+..+...........+++.|+++..|+++.++|.+.....+...+..++.|+++||.++|
T Consensus        12 ~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~   74 (448)
T PRK09848         12 GYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTR   74 (448)
T ss_pred             hhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCC
Confidence            344445455666666677788899998999999999999999999999999999999997543

>KOG2533|consensus

Probab=98.73  E-value=7.5e-08  Score=83.59  Aligned_cols=153  Identities=16%  Similarity=0.104  Sum_probs=108.2

Q ss_pred             hhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHH
Q psy4758         136 SVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLT  215 (318)
Q Consensus       136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (318)
                      +..++...+.+.+.+...++.+++.+.++.+.||++..+.+          ....++..+..++....++.+.....-++
T Consensus        74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l----------~~~~~~w~~~~~~~~~~~s~~~~ialr~l  143 (495)
T KOG2533|consen   74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGL----------SVSGILWGLFGFLTAAVHSFPGLIALRFL  143 (495)
T ss_pred             cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHH----------HHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            44778888899999999999999999999999999955433          22222222222222334444435556666


Q ss_pred             HHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC--CCccchHHHHHHHHHHHHHHHHH
Q psy4758         216 LAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN--TSVSQWQTIFLIAAAIFFFGNLI  292 (318)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~  292 (318)
                      .|.+-+. .+|....++...+.++ |+.-+|+.+...++|+++|+.+...+....  ....+|++.|++.+++.++..++
T Consensus       144 lGl~es~-~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~  222 (495)
T KOG2533|consen  144 LGLFESG-GWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIV  222 (495)
T ss_pred             HHHHhcc-cchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHhe
Confidence            6666544 5566555666666554 999999999999999999999988865422  22379999999999988887766


Q ss_pred             HHhhccc
Q psy4758         293 FLIFGTS  299 (318)
Q Consensus       293 ~~~~~~~  299 (318)
                      .++..+.
T Consensus       223 ~f~~lp~  229 (495)
T KOG2533|consen  223 VFFFLPD  229 (495)
T ss_pred             EEEEecC
Confidence            6555443

>KOG2325|consensus

Probab=98.71  E-value=8e-08  Score=82.03  Aligned_cols=272  Identities=11%  Similarity=0.094  Sum_probs=150.0

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCC-CC-----------chHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSP-WG-----------WPSIFYVSGAVAIVWAAAWCYIGANSPA   69 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~-~g-----------Wr~~f~~~~~~~~~~~~~~~~~~~~~~~   69 (318)
                      ++-...++|.++++....+..+|.++||.++..+..-. -|           +-.+=|+++++.++..++..++++|.++
T Consensus       155 a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~  234 (488)
T KOG2325|consen  155 ADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR  234 (488)
T ss_pred             HhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence            34455688999999999999999999998887776520 12           2345678888888888888888888776


Q ss_pred             CCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhc
Q psy4758          70 QHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLS  149 (318)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~  149 (318)
                      +....+.++.++    .+.+.++.+..+.+      .+..+.+.+..+...+.+....+..+.+....++++..++-...
T Consensus       235 ~~~~~~~~~~~~----~~~~~~~~~~~~~d------~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~  304 (488)
T KOG2325|consen  235 GIIDKKKRSVEE----EKSDIEKVKKPKLD------WVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYN  304 (488)
T ss_pred             Cccccccccchh----hccchhhhccCChh------HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhh
Confidence            543221111100    00000000111111      13345556666667777777777777787777888877765544


Q ss_pred             hHHH-HHHHHHHHHH-HHhHHHH---hhhcCcchHHHHHHHHHHHHHHHHHHHHHHH--h--cCc---------------
Q psy4758         150 AAPY-LAQWILILVF-SWLADYI---VAKQILSPTVSRKMWNTIGLWGSAAALVGLS--F--VGD---------------  205 (318)
Q Consensus       150 ~~~~-~~~~~~~~~~-g~l~dr~---g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~--~--~~~---------------  205 (318)
                      +... +.+++...+. ....-|.   .+|+.+          ..+++.......+..  +  ...               
T Consensus       305 gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~----------~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~  374 (488)
T KOG2325|consen  305 GITLSISGILSVILLLLYIFTRLGKIDKRRII----------LLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFE  374 (488)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhccceee----------eehHHHHHHhhheeeeeccccccccccccccccCcCcc
Confidence            4432 2233333222 2222232   334433          223222222222211  1  100               


Q ss_pred             -hhH--------HHHHHHH----HHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCc
Q psy4758         206 -NLV--------GAITCLT----LAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSV  272 (318)
Q Consensus       206 -~~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~  272 (318)
                       ..+        .....+.    ++.++-.........+...+.|.++++..|++......+..++|.+...+...    
T Consensus       375 ~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~----  450 (488)
T KOG2325|consen  375 EYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTL----  450 (488)
T ss_pred             cchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHh----
Confidence             000        1111111    11111111122344455566778899999999999999999999999888887    


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         273 SQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      .+++..+.+.....++...+.....
T Consensus       451 ~g~~~v~~~~~~~~l~~~~l~~~~~  475 (488)
T KOG2325|consen  451 SGPRPVWIILLCLLLVVAALWIVFL  475 (488)
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHHH
Confidence            5677777666655555544444433

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.70  E-value=6.8e-07  Score=72.74  Aligned_cols=156  Identities=16%  Similarity=0.096  Sum_probs=117.4

Q ss_pred             HHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758         125 TLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG  204 (318)
Q Consensus       125 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~  204 (318)
                      +....++..-++ +|+|...+|++.+++.++..+.+++..++.+|+|.++.+          ..++++.+++..+=... 
T Consensus        30 svgPLL~~Ir~~-~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l----------~~~Llli~~G~~iR~~~-   97 (395)
T COG2807          30 SVGPLLDEIRQD-LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSL----------FLALLLIAAGILIRSLG-   97 (395)
T ss_pred             hhhhhHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHH----------HHHHHHHHHHHHHHhcc-
Confidence            333444444444 899999999999999999999999999999999999866          55666666655544433 


Q ss_pred             chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758         205 DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA  284 (318)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  284 (318)
                      +...++....+.+.+ .+..+......+.+-+|++.+..+|++....++++++++.+.-.+.++.   .+|+..+.+-+.
T Consensus        98 ~~~~L~~gt~l~G~g-Iav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~---~gW~~aL~~WAl  173 (395)
T COG2807          98 GLPLLFLGTLLAGAG-IAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS---GGWRGALGFWAL  173 (395)
T ss_pred             cHHHHHHHHHHHHhh-HHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh---ccHHHHHHHHHH
Confidence            222233333333333 3445666777788889999999999999999999999999999998884   589999998888


Q ss_pred             HHHHHHHHHHhh
Q psy4758         285 IFFFGNLIFLIF  296 (318)
Q Consensus       285 ~~~~~~~~~~~~  296 (318)
                      ..++..+..+.-
T Consensus       174 ~allAl~~WlPq  185 (395)
T COG2807         174 LALLALLIWLPQ  185 (395)
T ss_pred             HHHHHHHHHhhh
Confidence            888877665544

>KOG0569|consensus

Probab=98.69  E-value=7.7e-08  Score=82.65  Aligned_cols=139  Identities=12%  Similarity=0.077  Sum_probs=93.2

Q ss_pred             hhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh---cCchhHHHHHHHHHHHHHhh
Q psy4758         146 GFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF---VGDNLVGAITCLTLAIAINA  222 (318)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  222 (318)
                      +...+...+++++|+++.++++||+|||..+          .+..++..++.++...   .+....+.+.-++.|.. .+
T Consensus        63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l----------~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~-~g  131 (485)
T KOG0569|consen   63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNAL----------LLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLA-CG  131 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcchHHH----------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-hH
Confidence            4556777899999999999999999999766          3333333333333322   22222234444444444 34


Q ss_pred             hccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhh-heeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         223 GTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFV-GFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       223 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~-g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      ........+..|..|.+ ||....+......+|..++..++ ..+...   ...|...+.+..+..++..+...+.++
T Consensus       132 l~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt---~~~W~~l~~~~~i~~~~~l~~l~~~PE  206 (485)
T KOG0569|consen  132 LSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGT---EDLWPYLLAFPLIPALLQLALLPFLPE  206 (485)
T ss_pred             HHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCC---CcchHHHHHHHHHHHHHHHHHHhcCCC
Confidence            45566777888999999 99999999998888888885443 233333   367888888777777777666666554

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.64  E-value=5.2e-07  Score=81.34  Aligned_cols=167  Identities=14%  Similarity=0.084  Sum_probs=113.4

Q ss_pred             HHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy4758         122 GYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQILSPTVSRKMWNTIGLWGSAAALVGL  200 (318)
Q Consensus       122 ~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~  200 (318)
                      ++|++...+..|+.+.+|++...+..+........-+..+++|+++|+ +|+++.+          .++.++..++..++
T Consensus         2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI----------l~~~ii~~lG~~ll   71 (654)
T TIGR00926         2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI----------LYLSIVYVVGHALL   71 (654)
T ss_pred             ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHHHHHHHHHHHHH
Confidence            456677777888888789998888888777777778888999999996 6777765          55666666666555


Q ss_pred             HhcCch-------hHHHHHHHHHHHHHhhhccccccccccccCcc----chhhHHHHHHHHHHHHHhHhhhhhheeeccC
Q psy4758         201 SFVGDN-------LVGAITCLTLAIAINAGTYTGFLSNHLDLSPN----FAGTLMGFTNGCANIASILGPLFVGFIVTDN  269 (318)
Q Consensus       201 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  269 (318)
                      ......       .......+.++.+..+..-++..+...+.+++    ++-+...+.....|+|+.+++.+.+++.+..
T Consensus        72 ai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~  151 (654)
T TIGR00926        72 SFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV  151 (654)
T ss_pred             HhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            543211       11122233333333444445555555554442    2677888889999999999999999887442


Q ss_pred             ---CCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         270 ---TSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       270 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                         +...+|..+|.+.+++++++.++....++
T Consensus       152 ~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k  183 (654)
T TIGR00926       152 GCFGCQDCYPLAFGVPAILMILALIVFMAGSK  183 (654)
T ss_pred             cccccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence               12247999999999888888777665443

>PF12832 MFS_1_like: MFS_1 like family

Probab=98.64  E-value=1.4e-07  Score=59.84  Aligned_cols=65  Identities=18%  Similarity=0.239  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758         111 AVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL  176 (318)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~  176 (318)
                      .+-..+++.+.+...+..++|.|+++ .|+|+.++|.+.++..+..+++.+++|+++||.++++..
T Consensus         4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~   68 (77)
T PF12832_consen    4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI   68 (77)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence            34466778888888999999999998 899999999999999999999999999999999999854

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=98.57  E-value=7.1e-06  Score=69.03  Aligned_cols=249  Identities=14%  Similarity=0.049  Sum_probs=143.2

Q ss_pred             cCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC-CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCCCh---
Q psy4758           4 WAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS-PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQH---PFISL---   76 (318)
Q Consensus         4 ~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---   76 (318)
                      ..|+++-.++.+...++.-+|-.++..+|-.+... ..+.+...++.. .+...+.+..+++|..++..   +...+   
T Consensus       121 ~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl-~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~  199 (412)
T PF01770_consen  121 VVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISL-ASVSLALLIALFLPMPKRSLFFHRKPPAEQD  199 (412)
T ss_pred             ecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHHHcCCCCcccceeccCccccc
Confidence            35777888999999999999999999999888763 134555555543 33344455666777755421   11000   


Q ss_pred             ---hHhhhhhhccCc---ccccccc-----------CCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--
Q psy4758          77 ---EERIYIETSLVH---SSTVSSS-----------MKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSV--  137 (318)
Q Consensus        77 ---~~~~~~~~~~~~---~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--  137 (318)
                         .+.+...+..++   .++.++.           ....+++..+||.++...+-+.+...+++-+..|.....++.  
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~  279 (412)
T PF01770_consen  200 ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPP  279 (412)
T ss_pred             cccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence               000000000000   0000000           012344556788898888888888999988888888888774  


Q ss_pred             hcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q psy4758         138 LQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLA  217 (318)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (318)
                      .+-+....|..-+...+.+.++++..|++..++.+..-+        ......++.+..++++...++.+......+++.
T Consensus       280 ~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l--------~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~  351 (412)
T PF01770_consen  280 SDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGEL--------ALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFR  351 (412)
T ss_pred             CCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHH--------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            133344456677777788888888889886666554432        112333444444555555555443333334444


Q ss_pred             HHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhh
Q psy4758         218 IAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLF  261 (318)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~  261 (318)
                      ............-+...+..+.-|...|+.++...+-..+-..+
T Consensus       352 ~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT~i  395 (412)
T PF01770_consen  352 SLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTILTLI  395 (412)
T ss_pred             HHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHheEEE
Confidence            44444444444444445555568888888777666555544433

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=98.53  E-value=3.3e-09  Score=92.70  Aligned_cols=142  Identities=15%  Similarity=0.184  Sum_probs=101.6

Q ss_pred             chhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC---chhHHHHHHHHHHHHH
Q psy4758         144 SNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG---DNLVGAITCLTLAIAI  220 (318)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  220 (318)
                      +.+...+...++..+|+++.|.++||+|||+.+          ..+..+..++.++..+.+   +.....+.-++.|.+.
T Consensus        47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~  116 (451)
T PF00083_consen   47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPAL----------IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGI  116 (451)
T ss_pred             HHHHHHHHHHhhhcccccccccccccccccccc----------ccccccccccccccccccccccccccccccccccccc
Confidence            356778888999999999999999999999988          667777777777777776   4443444455555554


Q ss_pred             hhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         221 NAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      + ........+..|..|++ |+...++.+....+|..++..+.-.+.+. .+...|+..+.+..+..++..+...+++
T Consensus       117 g-~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~-~~~~~Wr~~~~~~~~~~l~~~~~~~~~p  192 (451)
T PF00083_consen  117 G-GAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY-SDNWGWRILLIFGAIPSLLVLLLRFFLP  192 (451)
T ss_pred             c-ccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence            3 45566666777877766 99999999988888888777765544332 1124588888777777665555544444

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=98.53  E-value=7.1e-06  Score=67.23  Aligned_cols=166  Identities=11%  Similarity=-0.072  Sum_probs=92.3

Q ss_pred             HHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758         120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG  199 (318)
Q Consensus       120 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~  199 (318)
                      ..+-+.-..|.=..+++ +|++..+++.++......+.+...+.|.++||+|||+..          +..+++..++.+.
T Consensus        47 ~~aDWLQGpY~Y~LY~~-yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c----------l~~cily~~scl~  115 (354)
T PF05631_consen   47 MAADWLQGPYLYALYES-YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC----------LLFCILYSLSCLT  115 (354)
T ss_pred             HHHHHhhcchhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH----------HHHHHHHHHHHHH
Confidence            33333333333334444 899999999999999999999999999999999999854          4444555555433


Q ss_pred             HHhcCchhHHHHHHHHHHHHHhhhcccccccccccc----Cccc-hhhHHHHHHHHHH-HHHhHhhhhhheeeccCCCcc
Q psy4758         200 LSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDL----SPNF-AGTLMGFTNGCAN-IASILGPLFVGFIVTDNTSVS  273 (318)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~~~~~  273 (318)
                      - ..++...+.+.-++-+.........-=..+..|.    +|++ .+...+...+..| +-...+..++.++.|..+  .
T Consensus       116 k-~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~--~  192 (354)
T PF05631_consen  116 K-HSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG--F  192 (354)
T ss_pred             H-hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC--C
Confidence            2 2233332444444444443332222211222221    2333 4555554442323 334444555555556532  2


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         274 QWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      +...+|.....+.+++.++.....++
T Consensus       193 g~vaPF~~a~~~l~~~~~~I~~~W~E  218 (354)
T PF05631_consen  193 GPVAPFDAAIVLLAVAAVLILKTWPE  218 (354)
T ss_pred             CCcchHHHHHHHHHHHHHHHHhcccc
Confidence            34667877777777776665443333

>KOG2325|consensus

Probab=98.49  E-value=1.4e-06  Score=74.54  Aligned_cols=183  Identities=15%  Similarity=0.155  Sum_probs=110.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhh-hcCcchHHHHHHH
Q psy4758         108 PVWAVLITHLCQNWGYWTLLTEMPSYINS-VLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVA-KQILSPTVSRKMW  185 (318)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~~r~~~  185 (318)
                      .++...+..++....+..+..-.-.|+++ +.+-+.+..|+..+...++..+++++.|+...|.+. |+.+         
T Consensus        35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl---------  105 (488)
T KOG2325|consen   35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL---------  105 (488)
T ss_pred             hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH---------
Confidence            34555555555555444444334445544 356677888999999999999999999999999885 5555         


Q ss_pred             HHHHHHHHHHHHHHHH---hcCchhH--HHHHHHHHHHHHhhhcccccccccccc-CccchhhHHHHHHHHHHHHHhHhh
Q psy4758         186 NTIGLWGSAAALVGLS---FVGDNLV--GAITCLTLAIAINAGTYTGFLSNHLDL-SPNFAGTLMGFTNGCANIASILGP  259 (318)
Q Consensus       186 ~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~  259 (318)
                       +.+.++..++.++..   ..+++..  +.+.-++.|.+  .......-.+..+. .+++|.++++..+...-+|..+||
T Consensus       106 -i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg--~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp  182 (488)
T KOG2325|consen  106 -IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVG--VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGP  182 (488)
T ss_pred             -HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcC--cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhH
Confidence             677777777776663   2333222  22223333333  23334444444443 445588888887777777777777


Q ss_pred             hhhheeeccC-------C--CccchHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy4758         260 LFVGFIVTDN-------T--SVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ  302 (318)
Q Consensus       260 ~~~g~l~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (318)
                      .+...+....       .  .-..|..+-++.+.+.++..+......++..+
T Consensus       183 ~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~  234 (488)
T KOG2325|consen  183 TIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR  234 (488)
T ss_pred             HHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence            6544332210       0  01246667777777777777766665554433

>KOG3810|consensus

Probab=98.49  E-value=4.1e-06  Score=67.73  Aligned_cols=282  Identities=16%  Similarity=0.100  Sum_probs=154.5

Q ss_pred             cCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           4 WAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGW--PSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         4 ~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gW--r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      ..+|+++.++.|...+..-.|-..|..++..+... ..+  ...=.+ ...+...+.+...++|..+++.....++++..
T Consensus       122 ~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~-~~~sy~~LN~I-SL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~  199 (433)
T KOG3810|consen  122 KVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL-ETLSYTTLNYI-SLAEVTIAVLLALFLPRVKRSLYFHRLEDKIS  199 (433)
T ss_pred             ecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh-cccchhhhchh-hHHHHHHHHHHHhhCCCCchhhhhhcccccce
Confidence            46788999999999999999999998888888764 222  221122 22233333555566766553211111111111


Q ss_pred             hhhccCcccccc--c-------cCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh-cceeechhhhchH
Q psy4758          82 IETSLVHSSTVS--S-------SMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVL-QFDIKSNGFLSAA  151 (318)
Q Consensus        82 ~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~~~~~~~~~~~~  151 (318)
                      ..+..+.+++.+  +       .-..++.+..+||.+....+-+.+...+++-...|......+.. .-....-|..=..
T Consensus       200 v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv  279 (433)
T KOG3810|consen  200 VGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAV  279 (433)
T ss_pred             eccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHH
Confidence            111000000000  0       01123445567888888888888888888888888877776632 1111122334444


Q ss_pred             HHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccccccc
Q psy4758         152 PYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSN  231 (318)
Q Consensus       152 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (318)
                      ..+.++++.+..|.+.-++.|..-+        .+.++.+..+..++.+...++.+......+++...............
T Consensus       280 ~tlLGa~~~~~~g~l~i~w~r~g~~--------ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i  351 (433)
T KOG3810|consen  280 STLLGAIAALAAGYLNINWNRWGDL--------LLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQI  351 (433)
T ss_pred             HHHHHHHHHHHHHheeeccchhhHH--------HHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence            5666778888888887666665433        12444444444555555555544333333444444444444444455


Q ss_pred             ccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCc-------cchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         232 HLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSV-------SQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       232 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      ..++..+.-|...|+..++.-+-..+-..+   ..|..+-.       .-|..-|.+.+.+.+++........+
T Consensus       352 A~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~  422 (433)
T KOG3810|consen  352 ARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCR  422 (433)
T ss_pred             HHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhh
Confidence            556666668999998777666555544433   44532211       23445567777777777655444433

>KOG0252|consensus

Probab=98.46  E-value=3e-07  Score=76.96  Aligned_cols=112  Identities=15%  Similarity=0.143  Sum_probs=75.4

Q ss_pred             ceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc--Cchh--H---HHHH
Q psy4758         140 FDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV--GDNL--V---GAIT  212 (318)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~--~---~~~~  212 (318)
                      +++...+.+.....++.++|+++.|++.||+|||+..          ...+++..++-++....  .+..  .   +...
T Consensus        81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vY----------G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~  150 (538)
T KOG0252|consen   81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVY----------GKELIIMIICSALSGLSVGTTSPLGVMMTLCFF  150 (538)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhh----------hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHH
Confidence            4556667788888999999999999999999999977          33344444443333332  2222  1   3334


Q ss_pred             HHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhh
Q psy4758         213 CLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFV  262 (318)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~  262 (318)
                      -++++.+.+ +-+|+..+.++|...++ ||.-.+.....+..|...|..+.
T Consensus       151 R~~LGiGIG-GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt  200 (538)
T KOG0252|consen  151 RFLLGIGIG-GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVA  200 (538)
T ss_pred             HHHhhcccc-CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHH
Confidence            455555543 46788888888887777 99988888777776655554443

>KOG2816|consensus

Probab=98.45  E-value=6e-06  Score=71.43  Aligned_cols=132  Identities=23%  Similarity=0.241  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccc
Q psy4758         153 YLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNH  232 (318)
Q Consensus       153 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (318)
                      ++..++.++..|.++||+|||..+          ....+...+......+..  + +... ..-..+..........++.
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L----------~~~~~~~~l~~~~~~~~~--~-~~~~-~~~l~g~~~~~~s~~~a~v  137 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVL----------LLPLFGTILPALCLLFQG--Y-WFFL-LLGLSGGFSAIFSVGFAYV  137 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhH----------HHHHHHHHHhHHHHHHHH--H-HHhh-hcccccchhhhhhhhhhhe
Confidence            677888899999999999999877          334444433333333322  2 2222 2222233334555666677


Q ss_pred             cccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy4758         233 LDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEVQ  302 (318)
Q Consensus       233 ~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (318)
                      .+...++ |....|+.+.....+..++|.+.+.+.+.    .++..+|.+..+..++..+......++...
T Consensus       138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~----~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~  204 (463)
T KOG2816|consen  138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF----LGIALVFLIAAASGILSLLYMLLFLPESLQ  204 (463)
T ss_pred             eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh----cCchHHHHHHHHHHHHHHHHHhhccccccC
Confidence            7777766 99999999999999999999999999998    788899999999888888777766555443

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=98.38  E-value=1.3e-05  Score=69.91  Aligned_cols=145  Identities=17%  Similarity=0.099  Sum_probs=92.0

Q ss_pred             hhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHhhhc
Q psy4758         146 GFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFV-GDNLVGAITCLTLAIAINAGT  224 (318)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  224 (318)
                      ++..++..+...+..++.|-++|+-++||.+         +.....+..++...+.+. ++.+.....+++++.......
T Consensus        73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~---------l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~  143 (477)
T PF11700_consen   73 LYANSISGLLQALLAPFLGAIADYGGRRKRF---------LLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEAS  143 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcccccchHH---------HHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence            3556677778888899999999999988865         233334444444444443 344445555555555555556


Q ss_pred             cccccccccccCccc-h--------------------------hhHHHHHHHHHHHHHhHhhhhhheeeccCCC----cc
Q psy4758         225 YTGFLSNHLDLSPNF-A--------------------------GTLMGFTNGCANIASILGPLFVGFIVTDNTS----VS  273 (318)
Q Consensus       225 ~~~~~~~~~~~~~~~-~--------------------------~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~----~~  273 (318)
                      .....++..++.+++ +                          ++.++.-...+++|+.+.-.+.-.+....++    ..
T Consensus       144 ~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~  223 (477)
T PF11700_consen  144 NVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTW  223 (477)
T ss_pred             HHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccch
Confidence            667777777777666 6                          8999999999999988766654443322111    23


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         274 QWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      +.+.++.+.++..++..+..++..++
T Consensus       224 ~~r~~~~~~a~ww~vfsiP~~~~~~~  249 (477)
T PF11700_consen  224 AIRVAFLIVALWWLVFSIPLFLWLPD  249 (477)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence            56777777777655555444444433

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>KOG0253|consensus

Probab=98.34  E-value=5.4e-06  Score=67.82  Aligned_cols=158  Identities=10%  Similarity=0.048  Sum_probs=108.6

Q ss_pred             HHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758         125 TLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG  204 (318)
Q Consensus       125 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~  204 (318)
                      .....+..-+.+..|.+..+..++......+..+++..+|.++|++|||+..          ........+.-.+-...+
T Consensus        95 m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f----------~~T~l~t~v~~~is~~sp  164 (528)
T KOG0253|consen   95 MLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGF----------NLTFLVTGVFGVISGASP  164 (528)
T ss_pred             HHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhh----------hhhHHHHHHHHHhhcCCC
Confidence            3444455556666888888999999999999999999999999999999976          455555555555555555


Q ss_pred             chhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758         205 DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA  284 (318)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  284 (318)
                      +..++.+.-...+.+.++ .+.....+..-.+..+|+.-+-+. ....+|..+...+.-..+.+    .+|++-+.....
T Consensus       165 nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~----~gwr~~l~~~~~  238 (528)
T KOG0253|consen  165 NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN----FGWRYLLFTSST  238 (528)
T ss_pred             CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHh
Confidence            555444545555555544 333344444444444477766665 77778888777776666666    689988888776


Q ss_pred             HHHHHHHHHHhhcc
Q psy4758         285 IFFFGNLIFLIFGT  298 (318)
Q Consensus       285 ~~~~~~~~~~~~~~  298 (318)
                      ...+.+.+..+.++
T Consensus       239 pl~~~a~f~~w~~E  252 (528)
T KOG0253|consen  239 PLMFAARFLVWVYE  252 (528)
T ss_pred             HHHHHHHHHhhccc
Confidence            66666666655544

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=98.31  E-value=1.9e-05  Score=61.57  Aligned_cols=102  Identities=12%  Similarity=0.034  Sum_probs=59.8

Q ss_pred             CCchhHHHHHHhhHhhHHHhHHHHHHHH---hC-CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhh
Q psy4758           8 MERARLFSFAFSGTQFGNLVTLPVAGLL---AG-SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIE   83 (318)
Q Consensus         8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l---~~-~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (318)
                      |+|+....+...+.++|.++.-..--.-   .+ ..-.|++++.+.+++.++-.++..++  +++-+....++++.+.  
T Consensus         2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if--Gk~fd~~~~~~k~~k~--   77 (267)
T PF07672_consen    2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF--GKNFDIYSPKEKQEKE--   77 (267)
T ss_pred             CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccccCcccccccc--
Confidence            6778888888888888887764432111   11 01469999999998887765554444  3221111111000000  


Q ss_pred             hccCccccccccCCcchhhhhcchhHHHHHHHHHHHH
Q psy4758          84 TSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQN  120 (318)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (318)
                             +...+.+...++++|++..|...+.+....
T Consensus        78 -------~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL  107 (267)
T PF07672_consen   78 -------NSTLSKKPSYKSILKEKETWKWILIYGIWL  107 (267)
T ss_pred             -------cccccccchHHHHHccchHHHHHHHHHHHh
Confidence                   000334577889999999998877766543

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.30  E-value=4.3e-06  Score=72.41  Aligned_cols=159  Identities=22%  Similarity=0.205  Sum_probs=98.6

Q ss_pred             hhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCc---hh
Q psy4758         131 PSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGD---NL  207 (318)
Q Consensus       131 p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~  207 (318)
                      ..++++++|+++.+...+.....+...+ .++.|.++|-+.-...     .||+.+.++.++..++...+...+.   ..
T Consensus        13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~-----rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~   86 (433)
T PF03092_consen   13 YPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGY-----RRKPYMIIGWLLGAVSALVLALLPASESSA   86 (433)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCC-----cchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence            4466777999999988877766666555 6788999998741110     1233456676666555555555443   12


Q ss_pred             HHHHHHHHHHHHHhhhccccccccccccC---ccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHH
Q psy4758         208 VGAITCLTLAIAINAGTYTGFLSNHLDLS---PNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAA  284 (318)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  284 (318)
                      .....++++........-...-+...|..   |+.+|.-.+.......+|+.++..+.|.+.+.    .+++..|.+.+.
T Consensus        87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~----~~~~~~f~i~~~  162 (433)
T PF03092_consen   87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS----FGPQGVFLISAA  162 (433)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc----CCCeEEehHHHH
Confidence            12222222222222222233333333333   33378888888899999999999999999988    566777777777


Q ss_pred             HHHHHHHHHHhhccc
Q psy4758         285 IFFFGNLIFLIFGTS  299 (318)
Q Consensus       285 ~~~~~~~~~~~~~~~  299 (318)
                      +..+..+..+.+.++
T Consensus       163 ~~~l~~~~~~~~~~e  177 (433)
T PF03092_consen  163 LPLLMLIVALFLLEE  177 (433)
T ss_pred             HHHHHHHHHHHhhhh
Confidence            766666555555554

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=98.22  E-value=4.7e-05  Score=64.12  Aligned_cols=241  Identities=14%  Similarity=0.080  Sum_probs=111.3

Q ss_pred             hHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhc-cCcc-
Q psy4758          12 RLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETS-LVHS-   89 (318)
Q Consensus        12 ~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-   89 (318)
                      ...+-+.++.+.++++|+..-..+.....+-|..+.+...+.++..+..++.+|+++.+.+..+.++.+..+++ ...+ 
T Consensus       143 ~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (402)
T PF02487_consen  143 SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEAEDDLLESET  222 (402)
T ss_pred             cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCccccccccccc
Confidence            45778888888888888887766665324558888888888777656666666654332211111110000000 0000 


Q ss_pred             --ccccccCCcchhhhhcc-hhHHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhcce-eechhhhchHHHHHHHHHHHHHH
Q psy4758          90 --STVSSSMKVPWKAILTS-LPVWAVLITHLCQNWGYWTLL-TEMPSYINSVLQFD-IKSNGFLSAAPYLAQWILILVFS  164 (318)
Q Consensus        90 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g  164 (318)
                        .+.....+..+++-++. |..+...+-.+..++..|.++ ...|...-.....+ ..+.-++...+.++-++++--..
T Consensus       223 ~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~  302 (402)
T PF02487_consen  223 SESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSLP  302 (402)
T ss_pred             ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHHHhhhhccee
Confidence              00001112223322221 222223333333334444332 33333322111111 22333444444444444432211


Q ss_pred             HhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHH---HHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchh
Q psy4758         165 WLADYIVAKQILSPTVSRKMWNTIGLWGSAAAL---VGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAG  241 (318)
Q Consensus       165 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (318)
                      .+  |+  |++.        ...+.-.+-.+.+   ..+.+.++.+...+.++..|...+.........+..+..+++|.
T Consensus       303 ~~--ri--r~lw--------ils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~RE  370 (402)
T PF02487_consen  303 FF--RI--RRLW--------ILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDRE  370 (402)
T ss_pred             ee--eh--hhHH--------HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHH
Confidence            11  12  2211        1111111111111   11222333332334444445544445555566666777777799


Q ss_pred             hHHHHHHHHHHHHHhHhhhhhhe
Q psy4758         242 TLMGFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       242 ~~~g~~~~~~~~g~~~~~~~~g~  264 (318)
                      -++|.......+|..++..++-.
T Consensus       371 Fslg~vsvsds~GI~lAgll~l~  393 (402)
T PF02487_consen  371 FSLGAVSVSDSLGILLAGLLGLP  393 (402)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHH
Confidence            99999999888888877766533

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>KOG2563|consensus

Probab=98.19  E-value=3.2e-05  Score=65.03  Aligned_cols=156  Identities=13%  Similarity=0.071  Sum_probs=91.9

Q ss_pred             hhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-----c
Q psy4758         131 PSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG-----D  205 (318)
Q Consensus       131 p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~  205 (318)
                      ..+.++.+| +...+-++..++.+.+++..+.+-|+.||+|-|...          .++..+..++..+=....     +
T Consensus        68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~----------llgt~ln~iGa~Ir~iss~p~v~~  136 (480)
T KOG2563|consen   68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL----------LLGTVLNGIGAWIRLISSLPFVPP  136 (480)
T ss_pred             HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH----------HHHHHHHHHHHHHhhhccCccccc
Confidence            345555566 556666788888899999999999999999999876          455555555544322222     2


Q ss_pred             hhHHHHHHHHHHHHHhhhcccc-----ccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCC--ccchHH-
Q psy4758         206 NLVGAITCLTLAIAINAGTYTG-----FLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTS--VSQWQT-  277 (318)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~--~~~~~~-  277 (318)
                      ..+-  .+...|....+...+.     .-....-.+|++|+++..+..+...+|.+++..+-..+..+..+  ...|.. 
T Consensus       137 ~f~~--~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~  214 (480)
T KOG2563|consen  137 LFRR--PLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFF  214 (480)
T ss_pred             cchh--hhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHH
Confidence            2211  1222222222211111     11122234566699999999998999999999998888877521  234433 


Q ss_pred             -HHHHHHHHHHHHHHHHHhhccc
Q psy4758         278 -IFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       278 -~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                       .|+...++..+-+++..+.+++
T Consensus       215 ~~f~~~~~l~~l~l~l~~~~~~~  237 (480)
T KOG2563|consen  215 TLFLGVECLAALLLALVLFVFTK  237 (480)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC
Confidence             3444444444444344444433

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=98.18  E-value=3.5e-06  Score=60.63  Aligned_cols=64  Identities=23%  Similarity=0.425  Sum_probs=55.7

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGAN   66 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~   66 (318)
                      .|.+|+++|++.+++.+....+|..+++.+++.+.+. .+|++.|++.+...++..+..++..||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (141)
T TIGR00880        77 ADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF-LGWRAPFLFLAILALAAFILLAFLLPE  140 (141)
T ss_pred             HHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-cchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            4788999999999999999999999999999999987 899999999888877776666665554

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.17  E-value=3.4e-05  Score=64.44  Aligned_cols=123  Identities=18%  Similarity=0.121  Sum_probs=77.7

Q ss_pred             hhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHh-----hhcCcchHHHHHHHHHHHHHHHHHHHHHHH-----hcC
Q psy4758         135 NSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIV-----AKQILSPTVSRKMWNTIGLWGSAAALVGLS-----FVG  204 (318)
Q Consensus       135 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~  204 (318)
                      ..+++.+..-.+.+.+...+.+. .++..|..+|+.+     ||.....         .+..+...+..+.+     ...
T Consensus         7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~---------~G~~~~~~g~~~ap~a~~~l~~   76 (403)
T PF03209_consen    7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIW---------GGTLLQAGGLAIAPFALLLLAE   76 (403)
T ss_pred             HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhH---------HHHHHHHHHHHHHHHHHHHHcc
Confidence            34478887777777777666655 4888999999998     7766533         33333332222211     112


Q ss_pred             -------chhH----HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         205 -------DNLV----GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       205 -------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                             +.+.    .......++.+... ......+...|..|++ |+++.++...+.-+|..++..+.|.+.|.
T Consensus        77 ~~~~~~~~~~~g~~~a~l~F~l~G~G~~~-s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~  151 (403)
T PF03209_consen   77 SGQQSSGPFWLGLALAALAFLLYGLGVHA-SGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP  151 (403)
T ss_pred             cccccccccHHHHHHHHHHHHHHHhhHhH-hHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc
Confidence                   1211    12222233333333 3344555566666665 99999999999999999999999999887

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=98.16  E-value=0.00086  Score=58.32  Aligned_cols=167  Identities=8%  Similarity=-0.020  Sum_probs=99.5

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC-------CCCCch----HHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG-------SPWGWP----SIFYVSGAVAIVWAAAWCYIGANSPAQ   70 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-------~~~gWr----~~f~~~~~~~~~~~~~~~~~~~~~~~~   70 (318)
                      +|.++.+|-.|..++...+.++|.++++.+..++.+       ....|.    ..+.+.++.+++. ..+.+.+.+...+
T Consensus       155 ndi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~-~~~~~~l~~~~~~  233 (472)
T TIGR00769       155 NQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAI-ILLYWWVNRNVLT  233 (472)
T ss_pred             HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccC
Confidence            688888999999999999999999999999988873       112452    2334444333333 3334444332211


Q ss_pred             CCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeec----hh
Q psy4758          71 HPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKS----NG  146 (318)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~----~~  146 (318)
                      ++...+.++      .+++++.+.....+++.++|+|..+.+++...++..+.+.+..-.-..+.+.+ -++.+    .|
T Consensus       234 ~~~~~~~~~------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g  306 (472)
T TIGR00769       234 DPRSYNPAL------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMG  306 (472)
T ss_pred             Cccccchhh------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHH
Confidence            111111110      00011111233456778899999999888888887777777655555555433 23322    23


Q ss_pred             hhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758         147 FLSAAPYLAQWILILVFSWLADYIVAKQIL  176 (318)
Q Consensus       147 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~  176 (318)
                      ......++..++..++.+++.+|+|-+...
T Consensus       307 ~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a  336 (472)
T TIGR00769       307 DFSTWTGVVSVTMMLLSGNVIRKYGWLTAA  336 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            334444555666667779999999987644

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>KOG3098|consensus

Probab=97.96  E-value=0.00031  Score=60.38  Aligned_cols=152  Identities=15%  Similarity=0.087  Sum_probs=84.2

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcc--ee-echhhhchHHHHHHHHHHHHHHHhHHHHh---hhcC
Q psy4758         102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQF--DI-KSNGFLSAAPYLAQWILILVFSWLADYIV---AKQI  175 (318)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g---~~~~  175 (318)
                      +++++|+.+.+....+..+....-.....|..+.-....  +. ...+......+++.+++....+.+.+|..   ++..
T Consensus       235 ~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~  314 (461)
T KOG3098|consen  235 KLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPT  314 (461)
T ss_pred             HHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcc
Confidence            456677777776666555555555556666665443222  22 22334445556677777777777776654   4443


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhc-Cchh---------------H--HHHHHHHHHHHHhhhccccccccccccCc
Q psy4758         176 LSPTVSRKMWNTIGLWGSAAALVGLSFV-GDNL---------------V--GAITCLTLAIAINAGTYTGFLSNHLDLSP  237 (318)
Q Consensus       176 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~---------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (318)
                      +          .++..+..+..++.... +.+.               .  ..++.+..|.+ -.............+.|
T Consensus       315 ~----------~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~-D~~~~t~~~~ii~~~~~  383 (461)
T KOG3098|consen  315 V----------LIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFG-DACFNTQRYVIIALLYP  383 (461)
T ss_pred             h----------hHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhH-HHHHHHHHHHHHHHHhc
Confidence            3          44444444433333221 1100               1  22222333333 23344556667777789


Q ss_pred             cchhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758         238 NFAGTLMGFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       238 ~~~~~~~g~~~~~~~~g~~~~~~~~g~  264 (318)
                      ++|..+.++.-.-+.+++.++-.....
T Consensus       384 ~~~~~~fsi~kfyq~~~s~v~~f~~~~  410 (461)
T KOG3098|consen  384 DDRAQAFSLFKFYQSVASCVAFFFSPY  410 (461)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            999999999988888887766655433

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=97.78  E-value=0.0012  Score=55.83  Aligned_cols=163  Identities=13%  Similarity=0.128  Sum_probs=106.5

Q ss_pred             HHHHhhhhhhhhhh-hcceeechhhhchHHH-HHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy4758         124 WTLLTEMPSYINSV-LQFDIKSNGFLSAAPY-LAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS  201 (318)
Q Consensus       124 ~~~~~~~p~~l~~~-~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~  201 (318)
                      -....++..|+.+. .|++..+...-.-+.. -..+..-+....+.|.++.|..+          ++..+...+...++.
T Consensus        20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpvi----------il~~~~~i~t~~lll   89 (412)
T PF01770_consen   20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVI----------ILQALSYIITWLLLL   89 (412)
T ss_pred             CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHH----------HHHHHHHHHHHHHHH
Confidence            35568888888886 8898888764433333 34556667778999999999866          556555566666666


Q ss_pred             hcCchhHHHHHHHHHHHHHhhhcccccccccc-ccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHH
Q psy4758         202 FVGDNLVGAITCLTLAIAINAGTYTGFLSNHL-DLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFL  280 (318)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~  280 (318)
                      +.++-..+.+.-++.|.....  -....+++- .+.+++.-++.+......-+|.+++..++-.+....+  .+|....+
T Consensus        90 ~~~sv~~mq~~q~~yg~~~a~--evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~--~sy~~L~~  165 (412)
T PF01770_consen   90 FGTSVLAMQLMQFFYGLATAA--EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG--VSYFQLNY  165 (412)
T ss_pred             HHCcHHHHHHHHHHHHHHHHH--HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHH
Confidence            665554444444555544433  233333332 3455557777888888777777777777776665422  57787877


Q ss_pred             HHHHHHHHHHHHHHhhcccc
Q psy4758         281 IAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~  300 (318)
                      +......++.+..+++++.+
T Consensus       166 isl~~~~~a~~~~~fLP~~~  185 (412)
T PF01770_consen  166 ISLASVSLALLIALFLPMPK  185 (412)
T ss_pred             HHHHHHHHHHHHHHHcCCCC
Confidence            77777777777777776544

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=97.75  E-value=0.003  Score=54.33  Aligned_cols=180  Identities=12%  Similarity=0.146  Sum_probs=106.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHH
Q psy4758         108 PVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNT  187 (318)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~  187 (318)
                      ..+.+....++..+.--...+-.|.++.+.+.-+-.-.+.+...-.+..++.++..|...||..|.+.....   ....-
T Consensus         3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~---l~~Qn   79 (432)
T PF06963_consen    3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTS---LVVQN   79 (432)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHH---HHHHH
Confidence            345677788888888888888899999886554544455555556677788888889999999988876432   11223


Q ss_pred             HHHHHHHHHHHHHHhcCc-----hhH-HHHH--HHHHHHHHhhhccccccc-------cccccCccchhhHHHHHHHHHH
Q psy4758         188 IGLWGSAAALVGLSFVGD-----NLV-GAIT--CLTLAIAINAGTYTGFLS-------NHLDLSPNFAGTLMGFTNGCAN  252 (318)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~-----~~~-~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~  252 (318)
                      .+..+.++.+..+.....     ... ....  ...++...-........+       ...+-.++......+.+.-+-.
T Consensus        80 ~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL  159 (432)
T PF06963_consen   80 LSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDL  159 (432)
T ss_pred             HHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHH
Confidence            333333333333332222     121 1111  111111111111111111       1111123335666666666666


Q ss_pred             HHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         253 IASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       253 ~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      +.-.++|.+.|.+.+.    .++.....+.++..+++.+.=+
T Consensus       160 ~ckllaPl~vG~l~t~----~s~~~~~~~i~~~N~~S~~vEy  197 (432)
T PF06963_consen  160 FCKLLAPLFVGLLMTF----ASPVIAAIFIAGWNLASVFVEY  197 (432)
T ss_pred             HHHHHHHHHHHHHhhc----cCHHHHHHHHHHHHHHHHHHHH
Confidence            7889999999999987    5777788888888777776643

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=97.73  E-value=0.0019  Score=56.19  Aligned_cols=147  Identities=13%  Similarity=0.110  Sum_probs=82.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcce-----eechhhhchHHHHHHHHH-HHHHHHhHHHHhhhcCcchHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFD-----IKSNGFLSAAPYLAQWIL-ILVFSWLADYIVAKQILSPTV  180 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~-----~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~g~~~~~~~~~  180 (318)
                      |.++...+..++..+.++..     --++|....+     .+...++-....+...+. .++.+++++|+++++.+..  
T Consensus         7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~--   79 (472)
T TIGR00769         7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYT--   79 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHH--
Confidence            34555555555555544433     2234545553     345556666555554444 7889999999999997732  


Q ss_pred             HHHHHHHHHHHHHHHHH---HHHHhcCch-------------------------hHHHHHHHHHHHHHhhhcc-cccccc
Q psy4758         181 SRKMWNTIGLWGSAAAL---VGLSFVGDN-------------------------LVGAITCLTLAIAINAGTY-TGFLSN  231 (318)
Q Consensus       181 ~r~~~~~~~~~~~~~~~---~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~-~~~~~~  231 (318)
                            +....+....+   ++.+..+..                         .+......+..-..+.... ...+..
T Consensus        80 ------~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~f  153 (472)
T TIGR00769        80 ------VISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGF  153 (472)
T ss_pred             ------HHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  22222211111   111111110                         1111111122222222233 366677


Q ss_pred             ccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758         232 HLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV  266 (318)
Q Consensus       232 ~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~  266 (318)
                      ++|....+ ..+-.++.....++|..+++.+..++.
T Consensus       154 andi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~  189 (472)
T TIGR00769       154 ANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS  189 (472)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            77877665 889999999999999999999988876

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=97.65  E-value=0.0002  Score=45.87  Aligned_cols=77  Identities=17%  Similarity=0.242  Sum_probs=61.4

Q ss_pred             HHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758         120 NWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG  199 (318)
Q Consensus       120 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~  199 (318)
                      ..+-+.+...+|...+| .++|..+.+++.+...++..+|++...++.++.++++.+          ..+++...+....
T Consensus         5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~----------~~~l~~~~~~~~~   73 (85)
T PF06779_consen    5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLL----------RAGLLLTVLSTAA   73 (85)
T ss_pred             hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH----------HHHHHHHHHHHHH
Confidence            34556777788888777 899999999999999999999999999998886666655          5677777777777


Q ss_pred             HHhcCchh
Q psy4758         200 LSFVGDNL  207 (318)
Q Consensus       200 ~~~~~~~~  207 (318)
                      ..+.++..
T Consensus        74 ma~~~~~~   81 (85)
T PF06779_consen   74 MALTHSFW   81 (85)
T ss_pred             HHHHhchH
Confidence            77665543

Note that many members are hypothetical proteins.

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=97.64  E-value=0.00091  Score=55.17  Aligned_cols=146  Identities=17%  Similarity=0.092  Sum_probs=91.5

Q ss_pred             CCCCCchhHHHHHH-hhHhhHHHhHHHHHHHHhCCCCC--chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           5 APPMERARLFSFAF-SGTQFGNLVTLPVAGLLAGSPWG--WPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         5 ~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~g--Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      +|++..+..++... ...++-.+.+..++.++.+. .+  -..+|....++.++.+++....-+|+..+.....+..   
T Consensus       155 ~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~-~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~---  230 (354)
T PF05631_consen  155 FPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW-FGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLS---  230 (354)
T ss_pred             CChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH-hCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchH---
Confidence            34444555555444 34555567777777777765 44  4889988877777766666665566543322111111   


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhcceeechhhhchHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLL-TEMPSYINSVLQFDIKSNGFLSAAPYLAQWILI  160 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (318)
                                  +..+..++.+++||+++.+.+...+.-...+.+. .|.|..-.+  + ...--|++++...++.++|+
T Consensus       231 ------------~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~--~-~~~P~GlIFssFM~a~MlGS  295 (354)
T PF05631_consen  231 ------------GSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD--D-EELPLGLIFSSFMVAMMLGS  295 (354)
T ss_pred             ------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC--C-CCCCchHHHHHHHHHHHHHH
Confidence                        1112345677889999999888888877777765 455555422  1 22347888888888888888


Q ss_pred             HHHHHhHHH
Q psy4758         161 LVFSWLADY  169 (318)
Q Consensus       161 ~~~g~l~dr  169 (318)
                      .+..++..+
T Consensus       296 ~lf~~l~s~  304 (354)
T PF05631_consen  296 SLFSRLLSK  304 (354)
T ss_pred             HHHHHHHhC
Confidence            888765543

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=97.61  E-value=0.002  Score=56.39  Aligned_cols=167  Identities=11%  Similarity=0.071  Sum_probs=99.9

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhC--------CCCCchHHHHHHH----HHHHHHHHHHHHHhcCCCC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAG--------SPWGWPSIFYVSG----AVAIVWAAAWCYIGANSPA   69 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--------~~~gWr~~f~~~~----~~~~~~~~~~~~~~~~~~~   69 (318)
                      +|.++.+|-.|..++...+.++|.++++.+..++.+        ....|...+....    +.+++. ......+.+...
T Consensus       170 N~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i-~~~~~~~~~~vl  248 (491)
T PF03219_consen  170 NEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVI-ILLYRYMNKNVL  248 (491)
T ss_pred             HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHcc
Confidence            577888899999999999999999999999988887        1135665443222    222222 222333332211


Q ss_pred             CCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeec----h
Q psy4758          70 QHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKS----N  145 (318)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~----~  145 (318)
                      +.+...++++.      ++.++.+..-..+++.++|+|.+..+++...++..+.+.+....-..+++.+ -++.+    .
T Consensus       249 ~~~~~~~~~~~------~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~-~~~~~ysafm  321 (491)
T PF03219_consen  249 TDPRFYPSAKK------KKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLY-PDPNDYSAFM  321 (491)
T ss_pred             Cccccchhhhc------ccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCchHHHHHH
Confidence            11110000000      0001111233456777889999999999888888888877766655555533 23322    2


Q ss_pred             hhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758         146 GFLSAAPYLAQWILILVFSWLADYIVAKQIL  176 (318)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~  176 (318)
                      |......++..++..++++.+.+|+|-+...
T Consensus       322 G~~~~~tGivtii~~~l~~~iir~~GW~~~A  352 (491)
T PF03219_consen  322 GKFSSWTGIVTIIMMFLSSNIIRRFGWRTAA  352 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            3344555666677778889999998887654

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>PRK03612 spermidine synthase; Provisional

Probab=97.43  E-value=0.0046  Score=54.93  Aligned_cols=146  Identities=11%  Similarity=0.061  Sum_probs=75.6

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHH
Q psy4758         114 ITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGS  193 (318)
Q Consensus       114 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~  193 (318)
                      +..++..++...+.....-.+...+|-+....+.+.+.+..+..+|+.+++++.++..++.....       ..++++..
T Consensus        21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e-------~~i~l~~~   93 (521)
T PRK03612         21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVE-------LLLALLGG   93 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH-------HHHHHHHH
Confidence            34444455555555555556666678888888888888888888888888877644333321100       01111111


Q ss_pred             HHHHH---HHHhcCchhH-HHHHHHHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758         194 AAALV---GLSFVGDNLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVT  267 (318)
Q Consensus       194 ~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~  267 (318)
                      ....+   ...+...... .....+..+ ...+...|...-...+...++.+...|-......+|+.+|+.+.+++.-
T Consensus        94 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~-~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl  170 (521)
T PRK03612         94 LSALILYAAFAFQGLSRLLLYVLVLLIG-LLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLL  170 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence            11111   1111100011 111122222 2233333443333333333345677788888899999999998887654

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=97.43  E-value=0.0026  Score=52.11  Aligned_cols=151  Identities=22%  Similarity=0.248  Sum_probs=90.3

Q ss_pred             HHHHHHhhhhhhhhhhhccee--echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHH
Q psy4758         122 GYWTLLTEMPSYINSVLQFDI--KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVG  199 (318)
Q Consensus       122 ~~~~~~~~~p~~l~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~  199 (318)
                      .........+.+..+ .+.+.  ...+.......+...++.++.|++.||.|+|+.+          ..+......+...
T Consensus        17 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~~~~~~   85 (338)
T COG0477          17 DLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL----------IIGLLLFLLGTLL   85 (338)
T ss_pred             hcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH----------HHHHHHHHHHHHH
Confidence            333444455555555 44444  3677888888888888889999999999888544          3333222333333


Q ss_pred             HHhcCc-hhH-HHHHHHHHHHHHhhhccccccccccccCcc--chhhHHHHHHH-HHHHHHhHhhhhhheeeccCCCccc
Q psy4758         200 LSFVGD-NLV-GAITCLTLAIAINAGTYTGFLSNHLDLSPN--FAGTLMGFTNG-CANIASILGPLFVGFIVTDNTSVSQ  274 (318)
Q Consensus       200 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~~~~~  274 (318)
                      .....+ ... ........+.+. +...+.......+..|+  +|+...+.... ...++..++|.+.+.+.+.  ...+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  162 (338)
T COG0477          86 LALAPNVGLALLLILRLLQGLGG-GGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA--LLWG  162 (338)
T ss_pred             HHhCccchHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhcc
Confidence            333333 122 222222222322 24455566666677775  58888888877 5777888888777666555  3357


Q ss_pred             hHHHHHHHHHHH
Q psy4758         275 WQTIFLIAAAIF  286 (318)
Q Consensus       275 ~~~~~~~~~~~~  286 (318)
                      |+..+.......
T Consensus       163 ~~~~~~~~~~~~  174 (338)
T COG0477         163 WRAAFLLAALLG  174 (338)
T ss_pred             hHHHHHHHHHHH
Confidence            777555555444

>KOG3574|consensus

Probab=97.42  E-value=0.0018  Score=53.60  Aligned_cols=165  Identities=12%  Similarity=0.005  Sum_probs=94.4

Q ss_pred             chhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcch
Q psy4758          99 PWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP  178 (318)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~  178 (318)
                      -++++++-|.+..........-.++.+-....+.-+.| +|.+..+-+....+..-.+++.....|++...  .|++. .
T Consensus       257 ~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~-~  332 (510)
T KOG3574|consen  257 LLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLN-V  332 (510)
T ss_pred             HHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcch-H
Confidence            35567777888888888888888888888888888888 89999888776644444444444444443321  11111 1


Q ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHhcCc---hhH-----HHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHH
Q psy4758         179 TVSRKMWN-TIGLWGSAAALVGLSFVGD---NLV-----GAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTN  248 (318)
Q Consensus       179 ~~~r~~~~-~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~  248 (318)
                      - .|.... ..+......-.........   ...     +.+..-.+..++.........+..+.+.+.. -|+.+.+.|
T Consensus       333 ~-lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLN  411 (510)
T KOG3574|consen  333 F-LKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLN  411 (510)
T ss_pred             H-HHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHH
Confidence            0 011111 1111122222222222221   111     1111122233333333444445555666666 999999999


Q ss_pred             HHHHHHHhHhhhhhheeecc
Q psy4758         249 GCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       249 ~~~~~g~~~~~~~~g~l~~~  268 (318)
                      +..|+|+-.-..++.++.|.
T Consensus       412 TLsnLGg~wp~tv~l~l~D~  431 (510)
T KOG3574|consen  412 TLSNLGGNWPGTVALWLADG  431 (510)
T ss_pred             HHHHhcCCcHHHHHHHhccc
Confidence            99999999888888888875

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=97.40  E-value=0.00098  Score=56.01  Aligned_cols=164  Identities=19%  Similarity=0.098  Sum_probs=96.7

Q ss_pred             HHhhhhhhhhhhhcc---ee----echhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHH
Q psy4758         126 LLTEMPSYINSVLQF---DI----KSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALV  198 (318)
Q Consensus       126 ~~~~~p~~l~~~~g~---~~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~  198 (318)
                      ..+++|.|+++..+-   ++    ...++..++..+...+-+++.|.++|+.|+||..         ......+..+...
T Consensus        34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~---------~~~f~~i~i~~~~  104 (438)
T COG2270          34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKF---------FGFFTAIGIISTF  104 (438)
T ss_pred             eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchH---------HHHHHHHHHHHHH
Confidence            345677777765443   33    3345566777777788889999999999999865         2344455555566


Q ss_pred             HHHhcCc--hhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhh----------hee
Q psy4758         199 GLSFVGD--NLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFV----------GFI  265 (318)
Q Consensus       199 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~----------g~l  265 (318)
                      .+.+.++  ++...+.++.+.............+...++.+++ .++.++.....+++|+.+.-.+.          +.-
T Consensus       105 ~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~  184 (438)
T COG2270         105 LLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGIT  184 (438)
T ss_pred             HHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhccccccee
Confidence            6666665  3333333444444444455566667777666665 66667766666777665433331          110


Q ss_pred             ec----cCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         266 VT----DNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       266 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      ..    ...+...-+.++.+.++-.++..+-.+...+
T Consensus       185 ~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~  221 (438)
T COG2270         185 IILLGLPPADGEDVRITGLLAALWWLLFALPMILNVH  221 (438)
T ss_pred             EEeeccCccccccchhHHHHHHHHHHHHHhHHHhccc
Confidence            00    0122355677777777776666555554433

>KOG3626|consensus

Probab=97.35  E-value=0.0026  Score=57.63  Aligned_cols=168  Identities=14%  Similarity=0.187  Sum_probs=111.3

Q ss_pred             HHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy4758         125 TLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG  204 (318)
Q Consensus       125 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~  204 (318)
                      ++..-.-+-+++.++++..+.|++.+..-++..+...+..+...|..|.+.+          .+++++.+++.++..+.+
T Consensus       114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~I----------g~G~~~m~lgsll~alPH  183 (735)
T KOG3626|consen  114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWI----------GIGLVLMGLGSLLFALPH  183 (735)
T ss_pred             hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcccee----------eechhHHHHHHHHHhChH
Confidence            5554455556777999999999999999999999999999999999888877          456666655555443210


Q ss_pred             -----------------------------------------------chhHHHHHHHHHHHHHh----hhcccccccccc
Q psy4758         205 -----------------------------------------------DNLVGAITCLTLAIAIN----AGTYTGFLSNHL  233 (318)
Q Consensus       205 -----------------------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  233 (318)
                                                                     ........+++++....    ....+.-..++.
T Consensus       184 f~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiD  263 (735)
T KOG3626|consen  184 FFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYID  263 (735)
T ss_pred             HhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccc
Confidence                                                           00001222233332222    234455567777


Q ss_pred             ccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC------------C---ccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         234 DLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT------------S---VSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       234 ~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                      |...++ -....|+..++..+|-++|=.+++.......            |   ...|...|++.+.+.++..+.+++++
T Consensus       264 Dnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fP  343 (735)
T KOG3626|consen  264 DNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFP  343 (735)
T ss_pred             ccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            777666 7888899888888887777766665542211            1   13577778888888888888888887


Q ss_pred             ccccC
Q psy4758         298 TSEVQ  302 (318)
Q Consensus       298 ~~~~~  302 (318)
                      ++.++
T Consensus       344 k~lp~  348 (735)
T KOG3626|consen  344 KELPK  348 (735)
T ss_pred             ccCcc
Confidence            65543

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=97.32  E-value=0.019  Score=49.47  Aligned_cols=167  Identities=14%  Similarity=0.057  Sum_probs=93.7

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCC---------chHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWG---------WPSIFYVSGAVAIVWAAAWCYIGANSPAQHP   72 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~g---------Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (318)
                      +|.+..+|-.|..+.++.+.+++..++..+..++.++...         -+..+.+.+..++++..+..+.=+...+++.
T Consensus       174 Neitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~  253 (509)
T COG3202         174 NEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPL  253 (509)
T ss_pred             HHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc
Confidence            3566778888999999999999999999999998874122         3445555555555543333332222222211


Q ss_pred             CCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeech---hhhc
Q psy4758          73 FISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSN---GFLS  149 (318)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~---~~~~  149 (318)
                      ...+..++      ++.++.+-.-..+.+.++|+|..+.+.+...+++.+.+.+....-.-.++.+-.+.+..   |...
T Consensus       254 f~~~~~~k------k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~  327 (509)
T COG3202         254 FYLRAKKK------KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQ  327 (509)
T ss_pred             hhHHHhcc------cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHH
Confidence            11000000      00000002223456677888999988888888888877765443333333222222222   2233


Q ss_pred             hHHHHH-HHHHHHHHHHhHHHHhhhc
Q psy4758         150 AAPYLA-QWILILVFSWLADYIVAKQ  174 (318)
Q Consensus       150 ~~~~~~-~~~~~~~~g~l~dr~g~~~  174 (318)
                      ...++. .++...+++.+.+|.|-..
T Consensus       328 ~~tgvv~~v~~~~~~s~~ir~~GW~~  353 (509)
T COG3202         328 IWTGVVSLVVFLFPGSNLIRRVGWFT  353 (509)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHhhHHH
Confidence            344444 4555667888888888654

>KOG4332|consensus

Probab=97.18  E-value=0.03  Score=44.51  Aligned_cols=179  Identities=17%  Similarity=0.079  Sum_probs=85.9

Q ss_pred             hhhhhcchhHHHHHHHHHHHHHHHHH-HHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcch
Q psy4758         100 WKAILTSLPVWAVLITHLCQNWGYWT-LLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP  178 (318)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~  178 (318)
                      .+.+..++++.++...-.+.-...+. ...|.|..-.+..+.+   -|.+++...+..++|+-+..++..|-..|.--  
T Consensus       241 a~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iP---hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~--  315 (454)
T KOG4332|consen  241 ARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLLSRSSPKVES--  315 (454)
T ss_pred             HHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCC---chhHHHHHHHHHHHhhHHHHHHHhcCCcccch--
Confidence            34455666666554444444444443 3455554433323322   35667777777777777766665554333210  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh----cCch--hHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHH
Q psy4758         179 TVSRKMWNTIGLWGSAAALVGLSF----VGDN--LVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCA  251 (318)
Q Consensus       179 ~~~r~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~  251 (318)
                            .+.+.+.+.++.+.+...    .++.  ...-.+.++..-.+.+..++...-.-.+.-|++ |++.+-....--
T Consensus       316 ------ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPL  389 (454)
T KOG4332|consen  316 ------YMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPL  389 (454)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechh
Confidence                  112333333333222211    1111  112333344444445556666666666667776 888776665555


Q ss_pred             HHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHH
Q psy4758         252 NIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIF  293 (318)
Q Consensus       252 ~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (318)
                      ++...++-+.    .+..+...+-+..|-++.+...+..+..
T Consensus       390 nifvClvLyn----lh~~~~p~~tr~mf~icS~~~~~a~i~~  427 (454)
T KOG4332|consen  390 NIFVCLVLYN----LHVDAFPTTTRNMFGICSAFLFVASILQ  427 (454)
T ss_pred             hHhhhhhhee----cccccCccccchhhhhhHHHHHHHHHHH
Confidence            5544433222    1111111334566666666666554443

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=97.16  E-value=5.8e-05  Score=67.02  Aligned_cols=171  Identities=15%  Similarity=0.154  Sum_probs=0.3

Q ss_pred             HHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy4758         121 WGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGL  200 (318)
Q Consensus       121 ~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~  200 (318)
                      ...+++..-.-.-++.+++++..++|++.+..-++.++..++..++.+|..|.|.+          ..+.++.+++.+++
T Consensus        16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwi----------g~g~~~~~~g~~l~   85 (539)
T PF03137_consen   16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWI----------GIGALLMGLGSLLF   85 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccee----------eecHHHHHHHHHHH
Confidence            44444444444455667999999999999999999999999999999987777655          55666666665554


Q ss_pred             HhcCc-------------------------------------------h--hHHHHHHHHHHHHHhh----hcccccccc
Q psy4758         201 SFVGD-------------------------------------------N--LVGAITCLTLAIAINA----GTYTGFLSN  231 (318)
Q Consensus       201 ~~~~~-------------------------------------------~--~~~~~~~~~~~~~~~~----~~~~~~~~~  231 (318)
                      ...+-                                           .  .......++++....+    ..++.-.++
T Consensus        86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY  165 (539)
T PF03137_consen   86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY  165 (539)
T ss_dssp             ------------------------------------------------------------------SSS-----------
T ss_pred             hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence            32110                                           0  0012233333333322    234455567


Q ss_pred             ccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccC----C----------Cc----cchHHHHHHHHHHHHHHHHH
Q psy4758         232 HLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDN----T----------SV----SQWQTIFLIAAAIFFFGNLI  292 (318)
Q Consensus       232 ~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----~----------~~----~~~~~~~~~~~~~~~~~~~~  292 (318)
                      +.|..+++ .+...|+......+|-++|=.+++......    .          +.    ..|-..|++.+.+.++..+.
T Consensus       166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip  245 (539)
T PF03137_consen  166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP  245 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            77766655 778888888888888777777777665321    0          01    24566666677777777776


Q ss_pred             HHhhccccc
Q psy4758         293 FLIFGTSEV  301 (318)
Q Consensus       293 ~~~~~~~~~  301 (318)
                      .+.++|+-+
T Consensus       246 l~~FPk~lp  254 (539)
T PF03137_consen  246 LFFFPKKLP  254 (539)
T ss_dssp             ---------
T ss_pred             HHcCCccCC
Confidence            666665433

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>TIGR01272 gluP glucose/galactose transporter

Probab=97.15  E-value=0.0015  Score=54.12  Aligned_cols=87  Identities=17%  Similarity=0.202  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeeccCCC------------ccch
Q psy4758         209 GAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTDNTS------------VSQW  275 (318)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~------------~~~~  275 (318)
                      ..+..++++.+. ....+..+.+..++.++ ++++.+++...+..+|..++|.+.+.+......            ..+|
T Consensus        13 ~l~~~f~~g~G~-~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~   91 (310)
T TIGR01272        13 FLGALFVLASGL-TILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKV   91 (310)
T ss_pred             HHHHHHHHHhhH-HHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHH
Confidence            334444444444 34556666677777665 499999999999999999999999988743210            1367


Q ss_pred             HHHHHHHHHHHHHHHHHHHhh
Q psy4758         276 QTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      +.+++..+.+.++..+.....
T Consensus        92 ~~~yl~ia~~~~~~~i~~~~~  112 (310)
T TIGR01272        92 HTPYLLLAGALAVLAIIFAFL  112 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHc
Confidence            888886666655555444444

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>KOG0637|consensus

Probab=97.11  E-value=0.0016  Score=55.21  Aligned_cols=71  Identities=17%  Similarity=0.142  Sum_probs=48.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hhcceeec---------------hh-hhchHHHHHHHHHHHHHHHhHH
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINS-VLQFDIKS---------------NG-FLSAAPYLAQWILILVFSWLAD  168 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~~~---------------~~-~~~~~~~~~~~~~~~~~g~l~d  168 (318)
                      .|..+.+++...+...+++.+..|...++-+ .++-++..               .| +=+.+..+...+.+....++.|
T Consensus       278 pr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~  357 (498)
T KOG0637|consen  278 PRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSR  357 (498)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            3678888888999888888888888777743 34433221               11 2234455666777788889999


Q ss_pred             HHhhhcCc
Q psy4758         169 YIVAKQIL  176 (318)
Q Consensus       169 r~g~~~~~  176 (318)
                      |+|.|+.+
T Consensus       358 ~~g~r~~y  365 (498)
T KOG0637|consen  358 KFGTRKRY  365 (498)
T ss_pred             hcCcceEE
Confidence            99955544

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=97.10  E-value=0.014  Score=42.70  Aligned_cols=106  Identities=19%  Similarity=0.107  Sum_probs=67.0

Q ss_pred             hchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhcccc
Q psy4758         148 LSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTG  227 (318)
Q Consensus       148 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (318)
                      -.++......+.+++.+.+.+++|.|+.+          +++.+...+....... ++.........+.+.+. +..+..
T Consensus        42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm----------~lg~~~y~~y~~~~~~-~~~~~l~~~s~l~G~~~-a~lW~a  109 (156)
T PF05978_consen   42 SLAILYGSFAISCLFAPSIVNKLGPKWSM----------ILGSLGYAIYIASFFY-PNSYTLYPASALLGFGA-ALLWTA  109 (156)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhHHHH----------HHHHHHHHHHHHHHHh-hhHHHHHHHHHHHhhhh-HHhhHh
Confidence            34555667788888899999999999876          5555555544433332 23332344444444443 345555


Q ss_pred             ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhee
Q psy4758         228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFI  265 (318)
Q Consensus       228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l  265 (318)
                      ...++.+...++ +++-.++.-.+.+.+..+|..+.-.+
T Consensus       110 qg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~  148 (156)
T PF05978_consen  110 QGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI  148 (156)
T ss_pred             hhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            555565666555 99999998888888777777664443

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>KOG0637|consensus

Probab=97.05  E-value=0.0037  Score=53.15  Aligned_cols=148  Identities=14%  Similarity=0.060  Sum_probs=100.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHH----HhhhcCcchHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADY----IVAKQILSPTVSR  182 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~r  182 (318)
                      +.........+...+++..=.+|+|+|+++ .|.+....+......-+.+.+.+++.|..+||    +||||.+      
T Consensus        32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPf------  104 (498)
T KOG0637|consen   32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPF------  104 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccch------
Confidence            344555556666677777778999999999 89999999888888888899999999999995    6777765      


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCchh------------HHHHHHHHHHHHHhh----hccccccccccccCccc-hhh-HH
Q psy4758         183 KMWNTIGLWGSAAALVGLSFVGDNL------------VGAITCLTLAIAINA----GTYTGFLSNHLDLSPNF-AGT-LM  244 (318)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~-~~  244 (318)
                         +..+.....++++++.+..+..            ...+....+++...-    ......-++..|+..++ +.+ +.
T Consensus       105 ---I~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~An  181 (498)
T KOG0637|consen  105 ---ILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRAN  181 (498)
T ss_pred             ---HHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccc
Confidence               4556666667777666543311            133334444433222    22333444555555433 555 99


Q ss_pred             HHHHHHHHHHHhHhhhhhhe
Q psy4758         245 GFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       245 g~~~~~~~~g~~~~~~~~g~  264 (318)
                      +....+..+|+.+|-.+.++
T Consensus       182 s~f~~f~avGnvLGY~~g~y  201 (498)
T KOG0637|consen  182 SVFSFFMAVGNVLGYALGSY  201 (498)
T ss_pred             hhHHHHHHhcceeeeecccc
Confidence            99999999998887777653

>KOG3762|consensus

Probab=97.00  E-value=0.00033  Score=60.46  Aligned_cols=62  Identities=18%  Similarity=0.235  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcc
Q psy4758         115 THLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILS  177 (318)
Q Consensus       115 ~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~  177 (318)
                      .+++....+..+...++.|..+ +|+++.+.|.++..--+..+++.+++|.++||+.++|.+.
T Consensus        19 f~~~~~~~~g~l~pll~vy~kQ-LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~ll   80 (618)
T KOG3762|consen   19 FYLFFGARFGSLFPLLAVYFKQ-LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLL   80 (618)
T ss_pred             eeeeeeecccccchHHHHHHHH-cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchh
Confidence            4445555666778889999998 9999999999999999999999999999999999999873

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=96.99  E-value=0.02  Score=49.52  Aligned_cols=160  Identities=18%  Similarity=0.189  Sum_probs=89.4

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcC-cc---
Q psy4758         102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQI-LS---  177 (318)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-~~---  177 (318)
                      +++|-|++..+.+..+..-.++.+-......=+.| .|++.++.+...    +..+...++.|+++.|+.+.+. +.   
T Consensus       273 ~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~----li~~P~qii~~~~~~Kws~g~~P~~~~~  347 (544)
T PF13000_consen  273 KILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLV----LIDFPFQIILPYYIGKWSAGSPPLDVDN  347 (544)
T ss_pred             HHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHH----HHhhhHHHHHHHHhhhhhcCCCcccccc
Confidence            45667888888888888888877777777777777 899988876554    4455555566666666543222 00   


Q ss_pred             ----------------hH---HHHHHHHHHHHHHHH----HHHHHHHhcC-ch--hH----HHHHHHHHHHHHhhhcccc
Q psy4758         178 ----------------PT---VSRKMWNTIGLWGSA----AALVGLSFVG-DN--LV----GAITCLTLAIAINAGTYTG  227 (318)
Q Consensus       178 ----------------~~---~~r~~~~~~~~~~~~----~~~~~~~~~~-~~--~~----~~~~~~~~~~~~~~~~~~~  227 (318)
                                      .|   ..|.+  ..++..-.    ++.......+ +.  ..    .++..-.+..+........
T Consensus       348 ~~l~~~~~~~~~~~~l~g~~g~L~~W--l~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVa  425 (544)
T PF13000_consen  348 KALPNFSRANKIIRLLVGDAGALRPW--LWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVA  425 (544)
T ss_pred             ccccccccccchhhhhhccchhhHHH--HHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence                            00   01111  11111111    1111111222 11  11    2222223333434444444


Q ss_pred             ccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         228 FLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       228 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      ..+.-..+.... =|+.|.+.|++.|+|+-.-..+.=++.|.
T Consensus       426 i~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~  467 (544)
T PF13000_consen  426 IMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY  467 (544)
T ss_pred             HHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence            455555555444 89999999999999998777776666665

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=96.61  E-value=0.018  Score=49.13  Aligned_cols=109  Identities=17%  Similarity=0.083  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHHHHH--HhcCch-------hHHHHHHHHHHHHHhhhccccccccccccCcc---chhhHHHHHHHHHHHH
Q psy4758         187 TIGLWGSAAALVGL--SFVGDN-------LVGAITCLTLAIAINAGTYTGFLSNHLDLSPN---FAGTLMGFTNGCANIA  254 (318)
Q Consensus       187 ~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g  254 (318)
                      .++.++..++.+++  ...+..       ....+.+.+++.+.++.-+...........++   ++.+.........|+|
T Consensus         5 ~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G   84 (372)
T PF00854_consen    5 LLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIG   84 (372)
T ss_dssp             HHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhh
Confidence            45566666666552  222222       12445555555555554433333333333333   2788888999999999


Q ss_pred             HhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         255 SILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       255 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      +.+++.+.+++.++    .+|...|.+.++..+++.+.+..-++.
T Consensus        85 ~~~~~~~~~~i~~~----~~~~~~f~i~~~~~~~~~~~f~~~~~~  125 (372)
T PF00854_consen   85 SLFSPTLVPYIQQN----YGWFLGFGIPAIGMLLALIVFLSGRKR  125 (372)
T ss_dssp             HHHHHHCCCHHHHC----S-HHHHHHHHHHHHHHHHHHHHCCCCT
T ss_pred             hHhhcccchhhccc----cchhhhhhHHHHHHHHHHHHHHhCCcC
Confidence            99999999999988    899999999999888887766654433

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=96.38  E-value=0.24  Score=43.25  Aligned_cols=29  Identities=10%  Similarity=0.064  Sum_probs=20.6

Q ss_pred             cccCccchhhHHHHHHHHHHHHHhHhhhh
Q psy4758         233 LDLSPNFAGTLMGFTNGCANIASILGPLF  261 (318)
Q Consensus       233 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~  261 (318)
                      ..+.+++|..+..+.+....+|-.+|..+
T Consensus       399 ~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l  427 (437)
T TIGR00939       399 RQVDPHEREVAGALMVIFLLVGLALGAVL  427 (437)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455558888888888788887777665

>KOG3574|consensus

Probab=96.32  E-value=0.1  Score=43.79  Aligned_cols=146  Identities=14%  Similarity=0.035  Sum_probs=75.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHH-----HHhhhcCcchHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLAD-----YIVAKQILSPTVS  181 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~g~~~~~~~~~~  181 (318)
                      +++..+.+.+..+........ -.|.+++. .|.|-++.+.....+.=  .--.+++..+.|     |+||||....   
T Consensus        31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvv---  103 (510)
T KOG3574|consen   31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVV---  103 (510)
T ss_pred             hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceee---
Confidence            566777777777776665444 88988886 67776665544322211  111456666777     9999997633   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchh---------H-HHHHHHHHHHHHhhhccccc-cccccccCccchhhHHHHHHHH
Q psy4758         182 RKMWNTIGLWGSAAALVGLSFVGDNL---------V-GAITCLTLAIAINAGTYTGF-LSNHLDLSPNFAGTLMGFTNGC  250 (318)
Q Consensus       182 r~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~  250 (318)
                            -+..+.+..+..+....+.+         . .....++...+.....-... .....-+.|++.|-+.......
T Consensus       104 ------p~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg  177 (510)
T KOG3574|consen  104 ------PCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVG  177 (510)
T ss_pred             ------ehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence                  23333344444444332211         1 11111111112222221111 1222234566677777766666


Q ss_pred             HHHHHhHhhhhhhee
Q psy4758         251 ANIASILGPLFVGFI  265 (318)
Q Consensus       251 ~~~g~~~~~~~~g~l  265 (318)
                      .+.|.+++..+.-.+
T Consensus       178 ~~~GyfL~~~ifLaL  192 (510)
T KOG3574|consen  178 QTAGYFLGNVVFLAL  192 (510)
T ss_pred             HhhhHHhhcceeeEe
Confidence            777777766655444

>KOG1237|consensus

Probab=96.10  E-value=0.11  Score=46.85  Aligned_cols=175  Identities=18%  Similarity=0.136  Sum_probs=108.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHH-hhhcCcchHHHHHHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYI-VAKQILSPTVSRKMWNT  187 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~r~~~~~  187 (318)
                      .......-.+-..+++++..-+-.|+.+.++.+...+...............+.+++++|-+ ||-+.+          .
T Consensus        39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI----------~  108 (571)
T KOG1237|consen   39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTI----------N  108 (571)
T ss_pred             HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHH----------H
Confidence            34444455566667777777788888888888887777777777777778888999999965 555544          3


Q ss_pred             HHHHHHHHHHHHHHh-------cC-------c----h--hHHH--HH--HHHHHHHHhhhccccccccccccCc----cc
Q psy4758         188 IGLWGSAAALVGLSF-------VG-------D----N--LVGA--IT--CLTLAIAINAGTYTGFLSNHLDLSP----NF  239 (318)
Q Consensus       188 ~~~~~~~~~~~~~~~-------~~-------~----~--~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~  239 (318)
                      ++.++..+++.++..       .+       .    .  ....  +.  .+.......++.-+.......+-++    .+
T Consensus       109 ~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~  188 (571)
T KOG1237|consen  109 IGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVE  188 (571)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcch
Confidence            333333333222211       10       0    0  1011  11  1111111233344555555555555    22


Q ss_pred             ---hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Q psy4758         240 ---AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFG  297 (318)
Q Consensus       240 ---~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (318)
                         ...-+.......+.|..++..+..++.|.    .+|...|.+..++..++.++++...
T Consensus       189 ~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~----~~w~lgf~i~~~~~~lai~iF~~g~  245 (571)
T KOG1237|consen  189 VKGIPSFFNWFYFSQNGGALLAQTVLVYIQDN----VGWKLGFGIPTVLNALAILIFLPGF  245 (571)
T ss_pred             hhCcccchhHHHHHHHHHHHHHHHHHHhhhhc----ccceeeccHHHHHHHHHHHHHHcCc
Confidence               34677777888889999999998888877    7888889888888888777766543

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=95.80  E-value=1.4  Score=40.68  Aligned_cols=54  Identities=24%  Similarity=0.381  Sum_probs=42.5

Q ss_pred             CchhHHHHHHhhHhhHHHhHHHHHHHHhCC------CCCchHHHHHHHHHHHHHHHHHHH
Q psy4758           9 ERARLFSFAFSGTQFGNLVTLPVAGLLAGS------PWGWPSIFYVSGAVAIVWAAAWCY   62 (318)
Q Consensus         9 ~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------~~gWr~~f~~~~~~~~~~~~~~~~   62 (318)
                      +|-..+.++..+.++|+.+++.+..++.+.      ..+|...|.+.++..++..++...
T Consensus       121 ~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~  180 (654)
T TIGR00926       121 LRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMA  180 (654)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence            467788999999999999999999988742      147999999988887776554433

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=95.76  E-value=0.15  Score=43.49  Aligned_cols=167  Identities=19%  Similarity=0.125  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcc------e-----------------eechhhhchHHHHHHHHHHHHHHHh
Q psy4758         110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQF------D-----------------IKSNGFLSAAPYLAQWILILVFSWL  166 (318)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~------~-----------------~~~~~~~~~~~~~~~~~~~~~~g~l  166 (318)
                      ..+++...+.+..+..+.+-.-..+.+..+-      +                 ....+.+...-.+..++..+++.++
T Consensus         3 ~~fw~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~f   82 (402)
T PF02487_consen    3 VAFWLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFF   82 (402)
T ss_pred             hHHHHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhh
Confidence            3455666777777777777777777632110      0                 1112224444445667777778888


Q ss_pred             HHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccchhhHHHH
Q psy4758         167 ADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGF  246 (318)
Q Consensus       167 ~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  246 (318)
                      .+|+..+.-.          .....+..+++++..+.++... -+..+.+.....+..-.....+.. .+++.   ..+-
T Consensus        83 i~~v~y~~Ri----------~~~~~l~~~g~l~va~~~~v~~-~l~Gv~las~ssg~GE~tfL~lt~-~y~~~---~l~~  147 (402)
T PF02487_consen   83 IHRVPYWIRI----------LICVALSAAGMLLVAFSPSVWV-RLLGVVLASLSSGLGEVTFLSLTH-FYGKS---SLSA  147 (402)
T ss_pred             hhhccchHHH----------HHHHHHHHHHHhheeeccchhH-HHHHHHHHhhhhhhhHHHHHHHHH-hcCcc---cccc
Confidence            8877643212          4566677777777776655432 222222222222322233333332 33332   2222


Q ss_pred             HHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         247 TNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       247 ~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                      .......++.+|+...-.+.+ .+  .+.+..+.....+.++-.+.++
T Consensus       148 wssGTG~aGl~Ga~~y~~lT~-~g--~s~~~tll~~~~lp~~~~~~~f  192 (402)
T PF02487_consen  148 WSSGTGGAGLVGALYYLGLTT-LG--LSPRTTLLIMLVLPAIFLLSYF  192 (402)
T ss_pred             ccCCcChhhHHHHHHHHHHHH-hC--cCHHHHHHHHHHHHHHHHHHHH
Confidence            233333444455544433333 11  4556667666655544443333

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>KOG1479|consensus

Probab=95.63  E-value=0.13  Score=43.69  Aligned_cols=45  Identities=13%  Similarity=0.056  Sum_probs=23.1

Q ss_pred             HHHHhhhhhhhhhhhccee---echhhhchH-HHHHHHHHHHHHHHhHH
Q psy4758         124 WTLLTEMPSYINSVLQFDI---KSNGFLSAA-PYLAQWILILVFSWLAD  168 (318)
Q Consensus       124 ~~~~~~~p~~l~~~~g~~~---~~~~~~~~~-~~~~~~~~~~~~g~l~d  168 (318)
                      ....+..|-+..+..+-..   ...-..... ..+...+|.+...++-+
T Consensus       260 ~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~  308 (406)
T KOG1479|consen  260 FVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTW  308 (406)
T ss_pred             eeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccC
Confidence            3444567877776443222   122223333 56667777666555543

>KOG4686|consensus

Probab=95.26  E-value=0.0042  Score=49.59  Aligned_cols=151  Identities=9%  Similarity=-0.041  Sum_probs=87.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHh--hhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758         108 PVWAVLITHLCQNWGYWTLLT--EMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~--~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      ++..+.+..++.+.+++.+..  -+..+++...+.+..+..++++.+...+++-.+++|++.||.-.-|..         
T Consensus        42 r~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~g---------  112 (459)
T KOG4686|consen   42 RFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLG---------  112 (459)
T ss_pred             HHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHH---------
Confidence            444454555444444443321  122333333556666778888999999999999999999975433221         


Q ss_pred             HHHHHHHHHHHHHHHHhc---CchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhh
Q psy4758         186 NTIGLWGSAAALVGLSFV---GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLF  261 (318)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~  261 (318)
                      ..+-++...++-+++...   +..+.....-++++.+.-.. ....+.+....+.. +-+.++|+..+..++|+.+--.+
T Consensus       113 tii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESl-AVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~l  191 (459)
T KOG4686|consen  113 TIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESL-AVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLL  191 (459)
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhh-hhhhcceeEEEecCccccchhhHHHHHHHhhceeeeee
Confidence            122233333333333322   22222333444555443332 23344444444444 49999999999999999988888


Q ss_pred             hheeecc
Q psy4758         262 VGFIVTD  268 (318)
Q Consensus       262 ~g~l~~~  268 (318)
                      +++++|.
T Consensus       192 m~~ly~~  198 (459)
T KOG4686|consen  192 MPFLYDT  198 (459)
T ss_pred             cHHHHHH
Confidence            8888876

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=95.23  E-value=0.71  Score=40.86  Aligned_cols=41  Identities=15%  Similarity=0.102  Sum_probs=34.2

Q ss_pred             cccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeec
Q psy4758         227 GFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVT  267 (318)
Q Consensus       227 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~  267 (318)
                      ..+...++....+ ..+-+++.....|+|..+++.+..++.+
T Consensus       164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~  205 (491)
T PF03219_consen  164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS  205 (491)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566777777655 8999999999999999999998888777

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>KOG3880|consensus

Probab=94.41  E-value=0.13  Score=41.73  Aligned_cols=58  Identities=14%  Similarity=0.093  Sum_probs=39.1

Q ss_pred             hHHHHHHhhHhhHHHhHHHHHHHHhC-CCCCchHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy4758          12 RLFSFAFSGTQFGNLVTLPVAGLLAG-SPWGWPSIFYVSGAVAIVWAAAWCYIGANSPA   69 (318)
Q Consensus        12 ~~~~~~~~~~~~G~~~~~~~~~~l~~-~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~   69 (318)
                      ...+-+..+.+.++.+|..--..+.+ .+..-|.+.+++..+.++.+...++.+++++.
T Consensus       146 ~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes  204 (409)
T KOG3880|consen  146 IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPES  204 (409)
T ss_pred             ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcc
Confidence            34455566666667777666666665 33677888888888887776777777766543

>KOG3098|consensus

Probab=94.24  E-value=2.7  Score=36.88  Aligned_cols=111  Identities=16%  Similarity=0.092  Sum_probs=75.4

Q ss_pred             chhhh-chHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhh
Q psy4758         144 SNGFL-SAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINA  222 (318)
Q Consensus       144 ~~~~~-~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (318)
                      .+|+. .++......+..++.+.+.|+++.|..+          .++..........+.+.. .........++|.+.. 
T Consensus        50 ~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~l----------v~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaa-  117 (461)
T KOG3098|consen   50 YAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWAL----------VIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAA-  117 (461)
T ss_pred             CccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHH----------HHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHH-
Confidence            35554 6666777888999999999999999866          556655555555554443 2224555555555544 


Q ss_pred             hccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758         223 GTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV  266 (318)
Q Consensus       223 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~  266 (318)
                      ..+.....+..+...++ ..+..++.-.+...+..+|..+.-.+.
T Consensus       118 llw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~  162 (461)
T KOG3098|consen  118 LLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYF  162 (461)
T ss_pred             heecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence            45666666666766666 888899888888888777766555444

>KOG1479|consensus

Probab=93.96  E-value=3.6  Score=35.25  Aligned_cols=65  Identities=15%  Similarity=0.198  Sum_probs=37.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhh
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAK  173 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~  173 (318)
                      -.++.+++........++.+.+..+.|.++..+.+.  .-.....+.+.+.+...+...+--+...|
T Consensus        18 ~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~   82 (406)
T KOG1479|consen   18 LVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTR   82 (406)
T ss_pred             cHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345556666666677788888888877776545444  33444444455555455444444444433

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=93.95  E-value=0.73  Score=40.35  Aligned_cols=69  Identities=12%  Similarity=-0.004  Sum_probs=38.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhh-hhcceeechhhhc---hHHHHHHHHHHHHHHHhHHHHhhhcCcch
Q psy4758         110 WAVLITHLCQNWGYWTLLTEMPSYINS-VLQFDIKSNGFLS---AAPYLAQWILILVFSWLADYIVAKQILSP  178 (318)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~  178 (318)
                      .++.+.++++.........-.|..+++ ..+.|-.+.+...   -++.+=-+-+.++=...+.|+||||....
T Consensus         3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWii   75 (544)
T PF13000_consen    3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWII   75 (544)
T ss_pred             eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhh
Confidence            445666777766665545677888877 1344444444332   22222223333334556668999997643

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>KOG4332|consensus

Probab=93.91  E-value=0.035  Score=44.11  Aligned_cols=44  Identities=23%  Similarity=0.177  Sum_probs=36.4

Q ss_pred             hhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758         133 YINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL  176 (318)
Q Consensus       133 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~  176 (318)
                      |+.+.+|+...++|.++.......++...+.|-+.||.|||+.-
T Consensus        62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac  105 (454)
T KOG4332|consen   62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC  105 (454)
T ss_pred             eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce
Confidence            34455899999999988877777888888889999999999854

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=93.80  E-value=3.1  Score=36.51  Aligned_cols=149  Identities=13%  Similarity=0.128  Sum_probs=80.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcc---eeechhhhchHHHH-HHHHHHHHHHHhHHHHhhhcCcchHHHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQF---DIKSNGFLSAAPYL-AQWILILVFSWLADYIVAKQILSPTVSR  182 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~---~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~r  182 (318)
                      +.+....+..++..+.++.+     --++|.+.+   +++....+-...-+ ++++..++.+++.++..+++.+..    
T Consensus        27 ~kflpl~Ll~f~I~~ny~~l-----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~----   97 (509)
T COG3202          27 KKFLPLALLFFCILFNYNLL-----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYI----   97 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHH----
Confidence            55666666555554444333     223343333   34555555444444 567778888999999988886632    


Q ss_pred             HHHHHHHHHHH---HHHHHHHHhc---Cch-----------h------------HHHHHHHHHHHHH-hhhccccccccc
Q psy4758         183 KMWNTIGLWGS---AAALVGLSFV---GDN-----------L------------VGAITCLTLAIAI-NAGTYTGFLSNH  232 (318)
Q Consensus       183 ~~~~~~~~~~~---~~~~~~~~~~---~~~-----------~------------~~~~~~~~~~~~~-~~~~~~~~~~~~  232 (318)
                          ..+..+.   ..+.++.+..   +.+           +            +.........--. .....-......
T Consensus        98 ----~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~fa  173 (509)
T COG3202          98 ----ILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFA  173 (509)
T ss_pred             ----HHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                2222111   1222222110   000           0            1111111222111 222233455566


Q ss_pred             cccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         233 LDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       233 ~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      .|....+ ..+-+++.+...|++..++..+..++..+
T Consensus       174 Neitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~  210 (509)
T COG3202         174 NEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH  210 (509)
T ss_pred             HHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            6776655 88999999999999999999998888764

>KOG1237|consensus

Probab=92.81  E-value=7.2  Score=35.50  Aligned_cols=46  Identities=15%  Similarity=0.264  Sum_probs=38.1

Q ss_pred             chhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHH
Q psy4758          10 RARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVW   56 (318)
Q Consensus        10 r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~   56 (318)
                      +...+.++....++|..++..+-.++-+. .+|.+.|.+..+..++.
T Consensus       192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~-~~w~lgf~i~~~~~~la  237 (571)
T KOG1237|consen  192 IPSFFNWFYFSQNGGALLAQTVLVYIQDN-VGWKLGFGIPTVLNALA  237 (571)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhhhhc-ccceeeccHHHHHHHHH
Confidence            34778899999999999999988888777 89999998877666554

>KOG2601|consensus

Probab=92.29  E-value=2.8  Score=35.46  Aligned_cols=70  Identities=9%  Similarity=0.035  Sum_probs=45.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQIL  176 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~  176 (318)
                      +..+.+.+.++....+--...+-...|+.+-.|-|...+......-+....+...+.|...|+..|.|.+
T Consensus        27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi   96 (503)
T KOG2601|consen   27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVI   96 (503)
T ss_pred             ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHH
Confidence            3344455566666666555555566677664454555555555555566666777778889999999876

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=91.83  E-value=3.4  Score=33.04  Aligned_cols=64  Identities=8%  Similarity=0.003  Sum_probs=43.3

Q ss_pred             ccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy4758           3 KWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPA   69 (318)
Q Consensus         3 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~   69 (318)
                      +.|| ++||++.|+.-...++++.+-..+...+.+. ..-+.. .+.+....+..+...++++..|+
T Consensus       123 ~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fl-l~la~~~~~v~l~~~~~vr~~~~  186 (250)
T PF06813_consen  123 RNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFL-LFLAVLPAVVCLVAMFFVRPVPP  186 (250)
T ss_pred             HhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHH-HHHHHHHHHHHHHHhhheeccCC
Confidence            4576 6899999999999999999988888877765 333333 44444444444555555555443

>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs

Probab=91.59  E-value=0.042  Score=45.53  Aligned_cols=30  Identities=10%  Similarity=0.081  Sum_probs=0.0

Q ss_pred             cccCccchhhHHHHHHHHHHHHHhHhhhhh
Q psy4758         233 LDLSPNFAGTLMGFTNGCANIASILGPLFV  262 (318)
Q Consensus       233 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~  262 (318)
                      ..+.|++|..+..+....-.+|-.+|..+.
T Consensus       275 ~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls  304 (309)
T PF01733_consen  275 KSVSPEERELAGSVMSFFLSFGLFIGSVLS  304 (309)
T ss_dssp             ------------------------------
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344455577777777777777777776653

Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=89.36  E-value=9.8  Score=30.47  Aligned_cols=23  Identities=9%  Similarity=-0.216  Sum_probs=13.3

Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhh
Q psy4758         115 THLCQNWGYWTLLTEMPSYINSV  137 (318)
Q Consensus       115 ~~~~~~~~~~~~~~~~p~~l~~~  137 (318)
                      .........++....=..|++++
T Consensus       186 ~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  186 ILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             HHHHHHHHHHhcccchHHHHHhC
Confidence            33344455566666666677764

The region concerned is approximately 280 residues long.

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=88.60  E-value=0.49  Score=40.42  Aligned_cols=50  Identities=16%  Similarity=0.357  Sum_probs=42.2

Q ss_pred             CCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHH
Q psy4758           8 MERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAA   58 (318)
Q Consensus         8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~   58 (318)
                      ++|.+.+.++..+.++|..+++.+.+++.++ .||.+.|.+.++..++..+
T Consensus        68 ~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~-~~~~~~f~i~~~~~~~~~~  117 (372)
T PF00854_consen   68 SRRDSFFNWFYWGINIGSLFSPTLVPYIQQN-YGWFLGFGIPAIGMLLALI  117 (372)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHCCCHHHHC-S-HHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHhhhhHhhcccchhhccc-cchhhhhhHHHHHHHHHHH
Confidence            4577888999999999999999999999988 9999999998877666533

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.07  E-value=2.9  Score=27.99  Aligned_cols=32  Identities=19%  Similarity=0.237  Sum_probs=27.0

Q ss_pred             hhhHHHHHHHHHHHHHhHhhhhhheeeccCCC
Q psy4758         240 AGTLMGFTNGCANIASILGPLFVGFIVTDNTS  271 (318)
Q Consensus       240 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~  271 (318)
                      ++.+.++-...-.+++.+-....||+.|+..+
T Consensus        40 k~~~~a~klssefIsGilVGa~iG~llD~~ag   71 (116)
T COG5336          40 KGYAQAFKLSSEFISGILVGAGIGWLLDKFAG   71 (116)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            78888888888889998888899999998643

>KOG4830|consensus

Probab=87.78  E-value=1  Score=35.87  Aligned_cols=70  Identities=10%  Similarity=0.237  Sum_probs=54.5

Q ss_pred             ccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHH
Q psy4758          94 SSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVF  163 (318)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  163 (318)
                      +..+.+|..-|++-.+..+.+.+.+.-...+....|+|.|..+...++.....++-.+..+++..-+.+.
T Consensus       188 ~~~Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~  257 (412)
T KOG4830|consen  188 ELVRMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVN  257 (412)
T ss_pred             hhhcccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhc
Confidence            3345667777888888888899999988889999999999998888888777777666666666555443

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=87.22  E-value=16  Score=32.19  Aligned_cols=19  Identities=5%  Similarity=-0.106  Sum_probs=9.6

Q ss_pred             hhhccccccccccccCccc
Q psy4758         221 NAGTYTGFLSNHLDLSPNF  239 (318)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~  239 (318)
                      .+........+....+|+.
T Consensus       120 ~~~~q~s~~gla~~fp~~~  138 (437)
T TIGR00939       120 MALLQGSLFGLAGVFPSTY  138 (437)
T ss_pred             hhhhcccchhhcccCCHHH
Confidence            3444455555555555443

>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter

Probab=85.31  E-value=28  Score=31.44  Aligned_cols=31  Identities=10%  Similarity=0.186  Sum_probs=15.1

Q ss_pred             ceeechhhhchHHHHHHHHHHHHHHHhHHHH
Q psy4758         140 FDIKSNGFLSAAPYLAQWILILVFSWLADYI  170 (318)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~  170 (318)
                      +++..-|.+.....+..++.+.++|+.+-|+
T Consensus       290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~  320 (521)
T PF02990_consen  290 LSPNNRGSLLTAAIILYALTSFIAGYVSARL  320 (521)
T ss_pred             ccccCcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence            3444445554444444445555555554443

Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane

>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised

Probab=83.91  E-value=5.3  Score=29.00  Aligned_cols=30  Identities=17%  Similarity=0.241  Sum_probs=21.6

Q ss_pred             ccccccccCccchhhHHHHHHHHHHHHHhH
Q psy4758         228 FLSNHLDLSPNFAGTLMGFTNGCANIASIL  257 (318)
Q Consensus       228 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~  257 (318)
                      +-.+.....|++.|+..|+-.+-.|++-+.
T Consensus       116 YGilSaSWD~~r~GSllG~~e~~~N~~r~~  145 (153)
T PF11947_consen  116 YGILSASWDPEREGSLLGWEEFKRNWGRMW  145 (153)
T ss_pred             hhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence            333444667777999999998888876543

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=83.65  E-value=19  Score=29.22  Aligned_cols=32  Identities=16%  Similarity=0.005  Sum_probs=21.6

Q ss_pred             hhhhhcchhHHHHHHHHHHHHHHHHHHHhhhh
Q psy4758         100 WKAILTSLPVWAVLITHLCQNWGYWTLLTEMP  131 (318)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  131 (318)
                      .+++.|+|+.+..................|.|
T Consensus        62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv   93 (293)
T COG2962          62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAV   93 (293)
T ss_pred             HHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence            44577888777776666666666666666665

>KOG2881|consensus

Probab=80.33  E-value=28  Score=27.81  Aligned_cols=24  Identities=17%  Similarity=0.195  Sum_probs=15.4

Q ss_pred             HHHHHHHHHHHHHhHHHHhhhcCc
Q psy4758         153 YLAQWILILVFSWLADYIVAKQIL  176 (318)
Q Consensus       153 ~~~~~~~~~~~g~l~dr~g~~~~~  176 (318)
                      .+|..++.+-+-.++.|+..|++.
T Consensus       250 ~lCT~lAVigGk~lAskIS~rtVt  273 (294)
T KOG2881|consen  250 ALCTGLAVIGGKYLASKISVRTVT  273 (294)
T ss_pred             HHHHHHHHhhhHHHhhhheeEEEE
Confidence            344455444455678888888766

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	318
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	3e-36

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score =  134 bits (339), Expect = 3e-36
 Identities = 54/306 (17%), Positives = 107/306 (34%), Gaps = 14/306 (4%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           M  W    ER  + S        G  +   +  L       W +  Y+    AI+ A   
Sbjct: 144 MVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFA 203

Query: 61  CYIGANSPAQHPFISLEE--RIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLC 118
             +  ++P       +EE    Y +     +    ++ ++  + +L +  +W + I ++ 
Sbjct: 204 FAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVF 263

Query: 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
                + +L   P+Y+  V  F +  + +       A     L+  W++D +        
Sbjct: 264 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR-GA 322

Query: 179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP- 237
           T    M     L   A  +  ++  G+  V  I  + +   I  G       + L+L+P 
Sbjct: 323 TGVFFM----TLVTIATIVYWMNPAGNPTVDMICMIVIGFLIY-GPVMLIGLHALELAPK 377

Query: 238 NFAGTLMGFTNGCANI-ASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296
             AGT  GFT     +  S+     VG+ V D      W   F++         ++ ++ 
Sbjct: 378 KAAGTAAGFTGLFGYLGGSVAASAIVGYTV-DFFG---WDGGFMVMIGGSILAVILLIVV 433

Query: 297 GTSEVQ 302
              E +
Sbjct: 434 MIGEKR 439

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	318
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.97
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.94
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.91
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.91
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.89
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.87
2xut_A	524	Proton/peptide symporter family protein; transport	99.73
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.71
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.68
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.67
2xut_A	524	Proton/peptide symporter family protein; transport	99.65
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.62
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.45
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.01

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.97  E-value=9.9e-31  Score=226.42  Aligned_cols=282  Identities=16%  Similarity=0.212  Sum_probs=208.9

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCC-chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWG-WPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERI   80 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~g-Wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (318)
                      +|++|+++|++++++.+.+.++|.+++|.+++++.+. .| ||+.|++.++++++..++.++++||+|++.+..++++.+
T Consensus       145 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (451)
T 1pw4_A          145 VHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAW-FNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYK  223 (451)
T ss_dssp             HTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTC
T ss_pred             HHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhhccCCHhhcCCCChhhhc
Confidence            6899999999999999999999999999999998877 78 999999999998888777788888877653322111110


Q ss_pred             hh-hhccC-ccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHH
Q psy4758          81 YI-ETSLV-HSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWI  158 (318)
Q Consensus        81 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~  158 (318)
                      .. +++.+ +++++...++...++++++|.++...+..++.....+.+..++|.|+++.+|+++.+++.+.+...++.++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  303 (451)
T 1pw4_A          224 NDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIP  303 (451)
T ss_dssp             CC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            00 00000 00000011111256788999999999999999999999999999999998999999999999999999999


Q ss_pred             HHHHHHHhHHHH--hhhcCcchHHHHHHHHHHHHHHHH-HHHHHHHhcCc-hhH-HHHHHHHHHHHHhhhcccccccccc
Q psy4758         159 LILVFSWLADYI--VAKQILSPTVSRKMWNTIGLWGSA-AALVGLSFVGD-NLV-GAITCLTLAIAINAGTYTGFLSNHL  233 (318)
Q Consensus       159 ~~~~~g~l~dr~--g~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  233 (318)
                      +.++.|++.||+  ++|+.+          ..+..+.. ++++++...++ +.. .....+..+.+.. ...+....+..
T Consensus       304 ~~~~~g~l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~  372 (451)
T 1pw4_A          304 GTLLCGWMSDKVFRGNRGAT----------GVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIY-GPVMLIGLHAL  372 (451)
T ss_dssp             HHHHHHHHHHHTSTTCHHHH----------HHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHT-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCchhH----------HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHh-chHHHHHHHHH
Confidence            999999999999  888754          34444443 55555555433 222 3333333443333 33444455666


Q ss_pred             ccCccc-hhhHHHHHHHHHHH-HHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         234 DLSPNF-AGTLMGFTNGCANI-ASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       234 ~~~~~~-~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      +..|++ |+++.|+.+...++ |..++|.+.|.+.|.    .+|...|++.+++.+++.++.....++
T Consensus       373 ~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~  436 (451)
T 1pw4_A          373 ELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF----FGWDGGFMVMIGGSILAVILLIVVMIG  436 (451)
T ss_dssp             HTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS----SCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            667766 99999999999999 999999999999998    678899998888888887776665443

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.94  E-value=1.7e-26  Score=199.12  Aligned_cols=256  Identities=12%  Similarity=0.084  Sum_probs=191.2

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHh-CCCCC-------------------------chHHHHHHHHHHHH
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLA-GSPWG-------------------------WPSIFYVSGAVAIV   55 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~-~~~~g-------------------------Wr~~f~~~~~~~~~   55 (318)
                      +|++|+++|++++++.+.+.++|.++++.+++.+. +. .+                         ||+.|++.+++.++
T Consensus       143 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  221 (438)
T 3o7q_A          143 TVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSN-VPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLL  221 (438)
T ss_dssp             HHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTS-SCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999998 55 44                         99999888877776


Q ss_pred             HHHHHHHH-hcCCCCCCCCCChhHhhhhhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhh-
Q psy4758          56 WAAAWCYI-GANSPAQHPFISLEERIYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSY-  133 (318)
Q Consensus        56 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-  133 (318)
                      ..++.++. .||++++++   ++++             +++.+.++++++|+|.++...+..++..........++|.| 
T Consensus       222 ~~~~~~~~~~p~~~~~~~---~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (438)
T 3o7q_A          222 VALLIMLTKFPALQSDNH---SDAK-------------QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYA  285 (438)
T ss_dssp             HHHHHHHCCCCCCTTTCC---CCSS-------------TTSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCccccccc---cccc-------------ccchhhhHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            54443332 233222110   0000             02233567889999999999999999888899999999999 


Q ss_pred             hhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHH
Q psy4758         134 INSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITC  213 (318)
Q Consensus       134 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (318)
                      +++.+|+++.+++...+...++.+++.++.|+++||+++|+.+          ..+.++..++.+++...++.. .....
T Consensus       286 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~~~~  354 (438)
T 3o7q_A          286 VEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL----------AAYALIAMALCLISAFAGGHV-GLIAL  354 (438)
T ss_dssp             HHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH----------HHHHHHHHHHHHHHHHCCHHH-HHHHH
T ss_pred             hhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHcCCcH-HHHHH
Confidence            8887799999999999999999999999999999999999866          556666666666666655443 33333


Q ss_pred             HHHHHHHhhhccccccccccccCccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccc-hHHHHHHHHHHHHHHHH
Q psy4758         214 LTLAIAINAGTYTGFLSNHLDLSPNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQ-WQTIFLIAAAIFFFGNL  291 (318)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~  291 (318)
                      ++.+.+.. ...+.......+..|++++++.++.. ...+++.++|.+.|.+.|.    .+ ++..|++.+++.++..+
T Consensus       355 ~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~g~l~~~----~g~~~~~~~~~~~~~~~~~~  427 (438)
T 3o7q_A          355 TLCSAFMS-IQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDA----AGNIPTAELIPALCFAVIFI  427 (438)
T ss_dssp             HHHHHHHT-THHHHHHHHHHSSCGGGHHHHHHHHH-HTTHHHHHHHHHHHHHHHH----HTSSGGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHHHHhhccccccchhhHHH-HHHHHHHHHHHHHHHHHHH----hcchHHHHHHHHHHHHHHHH
Confidence            44444433 34455556655667777888888876 7789999999999999998    44 67777766555444433

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.91  E-value=1.1e-25  Score=190.24  Aligned_cols=245  Identities=13%  Similarity=0.067  Sum_probs=185.3

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      +|++|+++|++++++.+.+.++|..++|.+++++.+. .|||+.|++.+++.++..+...+.+||+++++++.       
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  185 (375)
T 2gfp_A          114 RDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTM-WNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPR-------  185 (375)
T ss_dssp             HHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCH-HHHHHHHHHHHHHHHHHHCCCCCSSCCCSTTTCCC-------
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHCcccCCCCccc-------
Confidence            5788999999999999999999999999999999887 79999999998888776555566677765432110       


Q ss_pred             hhhccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHH
Q psy4758          82 IETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILIL  161 (318)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (318)
                                  ++.+.++++++|+|.++...+..++..........+.|.|+++.+|.++.+.+.......++.+++.+
T Consensus       186 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~  253 (375)
T 2gfp_A          186 ------------TRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAW  253 (375)
T ss_dssp             ------------CCTTTCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ------------ccHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence                        12234567889999999999999999999999999999999998999999999999999999999999


Q ss_pred             HHHHhHHHHhhhcCcchHHHHHHHHHHHHHH-HHHHHH--HHHhcC-chhH-HHHHHHHHHHHHhhhccccccccccccC
Q psy4758         162 VFSWLADYIVAKQILSPTVSRKMWNTIGLWG-SAAALV--GLSFVG-DNLV-GAITCLTLAIAINAGTYTGFLSNHLDLS  236 (318)
Q Consensus       162 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~-~~~~~~--~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (318)
                      +.+++.||.+++.            ..+... ...+..  ...... ++.. .....++.+.+ .+...+.......|..
T Consensus       254 ~~~~l~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~  320 (375)
T 2gfp_A          254 FAGRPNKRFSTLM------------WQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFG-AGMLFPLATSGAMEPF  320 (375)
T ss_dssp             HHHTTTTHHHHHH------------HHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHH-HHHTSSTTHHHHHTHH
T ss_pred             HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHH-HHHhhHHHHHHHHHhC
Confidence            9999999998732            222222 222211  111111 1222 22333334433 3445566666677777


Q ss_pred             ccchhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHH
Q psy4758         237 PNFAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAA  283 (318)
Q Consensus       237 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~  283 (318)
                      |++|+++.|+.+...++|..++|.+.|.+.+.    .+|...+.+.+
T Consensus       321 p~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~----~~~~~~~~~~~  363 (375)
T 2gfp_A          321 PFLAGTAGALVGGLQNIGSGVLASLSAMLPQT----GQGSLGLLMTL  363 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCSTTCTHHHHH----HHHHHHHHHHH
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHHHhcC----CcccHHHHHHH
Confidence            86699999999999999999999999999877    67776666543

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.91  E-value=6e-24  Score=185.91  Aligned_cols=288  Identities=14%  Similarity=0.072  Sum_probs=179.3

Q ss_pred             CccCCCCC--chhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----CC
Q psy4758           2 SKWAPPME--RARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP-----FI   74 (318)
Q Consensus         2 ~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~   74 (318)
                      +|++|+++  |++++++++.+.++|..++|.+++.+.+. .|||+.|++.++..++..++..+..|+..++++     ..
T Consensus       134 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (491)
T 4aps_A          134 GTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEA-AGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLRPTDPL  212 (491)
T ss_dssp             HHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCSCCSCCC
T ss_pred             HHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHhCcccccccccCCCCcc
Confidence            58899988  77888889999999999999999999988 899999999887776665554444443222111     11


Q ss_pred             ChhHhhhhhhc-----------------cCc-cccc--------------------cccCCcchhhhhcchhHHHHHHHH
Q psy4758          75 SLEERIYIETS-----------------LVH-SSTV--------------------SSSMKVPWKAILTSLPVWAVLITH  116 (318)
Q Consensus        75 ~~~~~~~~~~~-----------------~~~-~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~  116 (318)
                      ++++.+...+.                 .+. +.++                    .+..+.+..+..+....+...+..
T Consensus       213 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (491)
T 4aps_A          213 APEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRVVSYIPLFIAA  292 (491)
T ss_dssp             SHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC------------CTTHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHH
Confidence            11111110000                 000 0000                    000000111111223345555555


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHH
Q psy4758         117 LCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAA  196 (318)
Q Consensus       117 ~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~  196 (318)
                      +.....+.....++|.|.++..+.+..+.+.......+..+++.++.+++.||++||+....     ..+..+..+.+++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~-----~~~~~~~~~~~~~  367 (491)
T 4aps_A          293 VLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSP-----TKFAVGLMFAGLS  367 (491)
T ss_dssp             HHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CH-----HHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCCch-----HHHHHHHHHHHHH
Confidence            56666666677888889988788887888999999999999999999999999999876421     1123555555555


Q ss_pred             HHHHHhcC---------chhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheee
Q psy4758         197 LVGLSFVG---------DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIV  266 (318)
Q Consensus       197 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~  266 (318)
                      +.++....         +........++.+.+. ....+....+..+..|++ |+++.|+.+...++|..++|.+.+.+.
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~  446 (491)
T 4aps_A          368 FLLMAIPGALYGTSGKVSPLWLVGSWALVILGE-MLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYN  446 (491)
T ss_dssp             HTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHH-HTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGG
T ss_pred             HHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHH-HHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            55544421         2222333333344433 333445555666777766 999999999999999999999999887


Q ss_pred             ccCCCccchHHHHHHHHHHHHHHHHHHHhhccccc
Q psy4758         267 TDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSEV  301 (318)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (318)
                      +.     ++...|...+++.+++.++.+...++.+
T Consensus       447 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  476 (491)
T 4aps_A          447 AK-----SEVAYFSYFGLGSVVLGIVLVFLSKRIQ  476 (491)
T ss_dssp             GS-----STTHHHHHTHHHHHHHHHHHHHC-----
T ss_pred             cc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            65     4556777777777777666665554433

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.89  E-value=3.1e-23  Score=177.63  Aligned_cols=263  Identities=11%  Similarity=0.096  Sum_probs=173.8

Q ss_pred             CCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccC
Q psy4758           8 MERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLV   87 (318)
Q Consensus         8 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (318)
                      ++|+...|....+..+|..++|.+++++.+  .+||+.|++.++..++..+. .+..+|++++..+  +++++       
T Consensus       134 ~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~--~~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~-------  201 (417)
T 2cfq_A          134 RRSNFEFGRARMFGCVGWALGASIVGIMFT--INNQFVFWLGSGCALILAVL-LFFAKTDAPSSAT--VANAV-------  201 (417)
T ss_dssp             HHHTCCHHHHSSSTTTHHHHHHHHHHHHHH--HCSHHHHTTTTTTTTTHHHH-SCSSCCCCSCSSC--SSSSS-------
T ss_pred             hhcccchHHHHHHHHHHHHHHHHHHHHHHH--hchhHHHHHHHHHHHHHHHH-HHHcCcccccccc--ccccc-------
Confidence            356777888888899999999999999887  58999999877765544333 3333332211110  00000       


Q ss_pred             ccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhc---ceeechhhhchHHHHHHHHHHHHHH
Q psy4758          88 HSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQ---FDIKSNGFLSAAPYLAQWILILVFS  164 (318)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~g  164 (318)
                       ++++++....++++++|+|+++...+..+.....+..+..++|.|+.+.++   .+....+.......++.+++.++.|
T Consensus       202 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g  280 (417)
T 2cfq_A          202 -GANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAP  280 (417)
T ss_dssp             -SSCCCCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -ccccccccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence             000001112345678899998887776666555666666778888876443   3344556777777788899999999


Q ss_pred             HhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhH
Q psy4758         165 WLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTL  243 (318)
Q Consensus       165 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  243 (318)
                      +++||+++|+.+          ..+..+.++....+...++.........+.+.+... ..+....+..|..|++ |+++
T Consensus       281 ~l~dr~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~p~~~~g~~  349 (417)
T 2cfq_A          281 LIINRIGGKNAL----------LLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPF-LLVGCFKYITSQFEVRFSATI  349 (417)
T ss_dssp             HHHHHHCHHHHH----------HHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHH-HHHHHHHHHHHHSCHHHHHHH
T ss_pred             HHHHHhcHHHHH----------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHH
Confidence            999999999865          455566666655555554433232222222322222 2223345666777777 9999


Q ss_pred             HHHH-HHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         244 MGFT-NGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       244 ~g~~-~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      .++. +...++|+.++|.+.|.+.|.    .++...|.+.+++.+++.++.+...+
T Consensus       350 ~g~~~~~~~~lg~~~gp~l~G~l~~~----~g~~~~f~~~~~~~l~~~~~~~~~~~  401 (417)
T 2cfq_A          350 YLVCFCFFKQLAMIFMSVLAGNMYES----IGFQGAYLVLGLVALGFTLISVFTLS  401 (417)
T ss_dssp             HHHHHTTTHHHHHHHHTHHHHTHHHH----SHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred             HHHHHHHHHhHHHHHhhhhHHHHHHh----cCcHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9994 888899999999999999987    67888898888888887776655444

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.87  E-value=4.2e-22  Score=174.17  Aligned_cols=290  Identities=15%  Similarity=0.100  Sum_probs=179.9

Q ss_pred             CCccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCC-------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-
Q psy4758           1 MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGS-------PWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHP-   72 (318)
Q Consensus         1 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-------~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-   72 (318)
                      ++|+.|+++|++..++.+.+..+|.++++.++..+...       ..+||+.+.+..+..++. ++..+++||+|+... 
T Consensus       151 i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~peSp~~L~~  229 (491)
T 4gc0_A          151 IAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLF-LMLLYTVPESPRWLMS  229 (491)
T ss_dssp             HHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHH-HHHGGGSCCCHHHHHH
T ss_pred             HHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhh-hhhhhcCCCChHHHHH
Confidence            36899999999999999999999999999998877653       135788877777666654 556677899886211 


Q ss_pred             CCChhHhhhhhhccCc---------cc---cccccCCcchhhhhcchhHHH-HHHHHHHHHHHHHHHHhhhhhhhhhhhc
Q psy4758          73 FISLEERIYIETSLVH---------SS---TVSSSMKVPWKAILTSLPVWA-VLITHLCQNWGYWTLLTEMPSYINSVLQ  139 (318)
Q Consensus        73 ~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~l~~~~g  139 (318)
                      +.++++.....++...         +.   ....++.......++.+.... .....+....+.+.+..|.|.+.++ .+
T Consensus       230 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  308 (491)
T 4gc0_A          230 RGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKT-LG  308 (491)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-SS
T ss_pred             cCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhhhHHHHhcccHHHHHHHHHHHHHHhhhhHHHhcchHHHHh-cC
Confidence            0111111110000000         00   000111112222333344333 3333444455556666777777666 67


Q ss_pred             ceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHH---hcCchhH-HHHHHHH
Q psy4758         140 FDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLS---FVGDNLV-GAITCLT  215 (318)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~  215 (318)
                      .+...........++..+++.++++++.||+|||+.+          ..+.....++++.+.   ....... .....+.
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  378 (491)
T 4gc0_A          309 ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ----------IIGALGMAIGMFSLGTAFYTQAPGIVALLSMLF  378 (491)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHH----------HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred             CCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchh----------ccchHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence            7777777777778889999999999999999999866          334444443333322   2222222 2222333


Q ss_pred             HHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCC--ccchHHHHHHHHHHHHHHHHH
Q psy4758         216 LAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTS--VSQWQTIFLIAAAIFFFGNLI  292 (318)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~  292 (318)
                      ...++.....+....+..|++|++ |+++.|+.+..+++++.+++.+.+.+.+....  ..++...|++.+++++++.+.
T Consensus       379 ~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~  458 (491)
T 4gc0_A          379 YVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALF  458 (491)
T ss_dssp             HHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence            333334444456667888999998 99999999999999999999988877653110  023445677778888887777


Q ss_pred             HHhhcccccC
Q psy4758         293 FLIFGTSEVQ  302 (318)
Q Consensus       293 ~~~~~~~~~~  302 (318)
                      .+++.++++.
T Consensus       459 ~~~~~PETkg  468 (491)
T 4gc0_A          459 MWKFVPETKG  468 (491)
T ss_dssp             HHHHCCCCTT
T ss_pred             HHheecCCCC
Confidence            6555444433

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.73  E-value=4.8e-18  Score=149.69  Aligned_cols=287  Identities=11%  Similarity=0.064  Sum_probs=139.9

Q ss_pred             CccCCCCCchhHHHH---HHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCh-h
Q psy4758           2 SKWAPPMERARLFSF---AFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISL-E   77 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~---~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   77 (318)
                      +|++|+++|+++.+.   .+.+.++|.+++|.+++.+.+. .|||+.|++.+++.++..++..+..|+.++++++.++ .
T Consensus       135 ~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (524)
T 2xut_A          135 GDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKN-FGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPH  213 (524)
T ss_dssp             HHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHT-SCHHHHHHHHHHHHHHHHHHHHSSSSSCCCCC-------
T ss_pred             HHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccch
Confidence            588999999877666   9999999999999999999887 8999999998887766544443322322111110000 0


Q ss_pred             H-hhhhhhccCcccc---c-------------------------------------cccCCcchh------------hhh
Q psy4758          78 E-RIYIETSLVHSST---V-------------------------------------SSSMKVPWK------------AIL  104 (318)
Q Consensus        78 ~-~~~~~~~~~~~~~---~-------------------------------------~~~~~~~~~------------~~~  104 (318)
                      + .+......++.+.   .                                     ++..+.+++            +..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (524)
T 2xut_A          214 GFLPVIRSALLTKVEGKGNIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARKSHPDAAVD  293 (524)
T ss_dssp             -------------CTTHHHHHHHHHHHHHHHHHHTGGGTTTTCSSHHHHHHHHHHHHHHHTGGGTHHHHSCCSCCSSSST
T ss_pred             hHHHHHHHHHhhhhcccCccchhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhcccccchhhHHhhhhccccHhHHH
Confidence            0 0000000000000   0                                     000000110            001


Q ss_pred             cchhHHHHHHHHHHHHHHHHH-HHhhhhhhhhhhhccee---echhhhchHHHHHHHHHHHHHHHhH----HHHhhhcCc
Q psy4758         105 TSLPVWAVLITHLCQNWGYWT-LLTEMPSYINSVLQFDI---KSNGFLSAAPYLAQWILILVFSWLA----DYIVAKQIL  176 (318)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~g~l~----dr~g~~~~~  176 (318)
                      +.++.+........ ...++. ...+.+.+.....+.+.   ...+.+.....++.+++.++.+++.    ||.++|...
T Consensus       294 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (524)
T 2xut_A          294 GVRSVLRILVLFAL-VTPFWSLFDQKASTWILQANDMVKPQWFEPAMMQALNPLLVMLLIPFNNFVLYPAIERMGVKLTA  372 (524)
T ss_dssp             TTTTHHHHHHHHTT-SHHHHTTTSSTTTHHHHHHHHSCCCSSSCHHHHHTTSGGGHHHHGGGTTTC------------CC
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHhccchhhHHhHHhcCCCeeecHHHHHHHHHHHHHHhHHHHHhhhHHHHHhcCCCCCh
Confidence            11222222111111 111111 12222223222122222   1344554444455555555555553    444332211


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhcC---------chhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHH
Q psy4758         177 SPTVSRKMWNTIGLWGSAAALVGLSFVG---------DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGF  246 (318)
Q Consensus       177 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~  246 (318)
                            +.....+.++.+++++++....         +........++.+.+... ..+....+..+..|++ ||+++|+
T Consensus       373 ------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~  445 (524)
T 2xut_A          373 ------LRKMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQILPYALLTFGEVL-VSATGLEFAYSQAPKAMKGTIMSF  445 (524)
T ss_dssp             ------HHHHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHHHHHHHHHHHHHH-HHHHHTTTHHHHCCTTCCTTTHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcHHHHhHHHHH
Confidence                  0112455666666666555432         222233333444444333 3455555566666655 9999999


Q ss_pred             HHHHHHHHHhHhhhhhheeeccCCCccch---------HHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         247 TNGCANIASILGPLFVGFIVTDNTSVSQW---------QTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       247 ~~~~~~~g~~~~~~~~g~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      .+...++|+.++|.+.+.+.+..+  .+|         ...|++.+++.+++.++.+...++
T Consensus       446 ~~~~~~~g~~~g~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (524)
T 2xut_A          446 WTLSVTVGNLWVLLANVSVKSPTV--TEQIVQTGMSVTAFQMFFFAGFAILAAIVFALYARS  505 (524)
T ss_dssp             HGGGHHHHHHHHHHHHHHTTSCHH--HHHHHHHHSCHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHHHHHHHHHHhccccc--ccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999887421  112         233666666666666665554443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.71  E-value=8.3e-17  Score=140.64  Aligned_cols=177  Identities=15%  Similarity=0.119  Sum_probs=142.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-----hcceeechhhhchHHHHHHHHHHHHHHHhHHH-HhhhcCcchHH
Q psy4758         107 LPVWAVLITHLCQNWGYWTLLTEMPSYINSV-----LQFDIKSNGFLSAAPYLAQWILILVFSWLADY-IVAKQILSPTV  180 (318)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~  180 (318)
                      |.++...+..++....++.+..+++.|+++.     +|.+..+.+++.+...++..++.++.|+++|| +|||+.+    
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~----   88 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAV----   88 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHH----
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHH----
Confidence            4567777888888889999999999999987     89999999999999999999999999999999 8999976    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCc-cc--hhhHHHHHHHHHHHHHhH
Q psy4758         181 SRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSP-NF--AGTLMGFTNGCANIASIL  257 (318)
Q Consensus       181 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~g~~~~~~~~g~~~  257 (318)
                            ..+.++..++.++....++...+.+..++.+.+.+. ..+....+..|..| ++  |+.+.++.+...++|..+
T Consensus        89 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~  161 (491)
T 4aps_A           89 ------FWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGF-LKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFI  161 (491)
T ss_dssp             ------HHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHH-HHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-ccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHH
Confidence                  677778888888877776666555555555555444 34455555556554 44  777888899999999999


Q ss_pred             hhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         258 GPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       258 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      +|.+.+.+.+.    .+|+..|++.++..+++.+......+
T Consensus       162 ~~~~~~~l~~~----~g~~~~f~~~~~~~~~~~~~~~~~~~  198 (491)
T 4aps_A          162 APLIVGAAQEA----AGYHVAFSLAAIGMFIGLLVYYFGGK  198 (491)
T ss_dssp             HHHHHHHHHHH----SCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            99999999988    68999999988777777666554433

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.68  E-value=3.1e-16  Score=135.39  Aligned_cols=176  Identities=13%  Similarity=0.072  Sum_probs=136.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHH
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMW  185 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~  185 (318)
                      .+.++...+..+........+...+|.+.++ + .++.+.+++.+...++..++.++.|+++||+|||+.+         
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l---------   95 (451)
T 1pw4_A           27 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-G-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL---------   95 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSHHHHHHHTTSS-T-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH---------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHH---------
Confidence            3455666666666666666677888888877 6 9999999999999999999999999999999999976         


Q ss_pred             HHHHHHHHHHHHHHHHh----cCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhh
Q psy4758         186 NTIGLWGSAAALVGLSF----VGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPL  260 (318)
Q Consensus       186 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~  260 (318)
                       ..+.++.+++.++..+    .++...+.+..++.+.+.+ ...+....+..|..|++ |++++++.+....+|..++|.
T Consensus        96 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~  173 (451)
T 1pw4_A           96 -PAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQG-MGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPL  173 (451)
T ss_dssp             -HHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHH-HTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHH
T ss_pred             -HHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHhh-hccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence             6777777777777777    6555544555555555543 34555566667777755 999999999999999999999


Q ss_pred             hhheeeccCCCccc-hHHHHHHHHHHHHHHHHHHHhhcc
Q psy4758         261 FVGFIVTDNTSVSQ-WQTIFLIAAAIFFFGNLIFLIFGT  298 (318)
Q Consensus       261 ~~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  298 (318)
                      +.+.+.+.    .+ |+..|++.+++.++..++.....+
T Consensus       174 ~~~~l~~~----~g~w~~~f~~~~~~~~~~~~~~~~~~~  208 (451)
T 1pw4_A          174 LFLLGMAW----FNDWHAALYMPAFCAILVALFAFAMMR  208 (451)
T ss_dssp             HHHHHHHH----TCCSTTCTHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHH----hccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99998877    56 999999888877776655544433

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.67  E-value=8.9e-16  Score=132.08  Aligned_cols=176  Identities=13%  Similarity=0.110  Sum_probs=129.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHH
Q psy4758         109 VWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTI  188 (318)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~  188 (318)
                      +....+..+.............|.+.++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+          ..
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l----------~~   96 (438)
T 3o7q_A           28 FALLCSLFFLWAVANNLNDILLPQFQQA-FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI----------IT   96 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHH----------HH
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHH----------HH
Confidence            4445555556666666677778876655 999999999999999999999999999999999999976          66


Q ss_pred             HHHHHHHHHHHH---HhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhhe
Q psy4758         189 GLWGSAAALVGL---SFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGF  264 (318)
Q Consensus       189 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~  264 (318)
                      +.++.+++.++.   ...++.+.+.+..++.+.+.+. ..+....+..|..|++ |++++++.+...++|..++|.+.+.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~  175 (438)
T 3o7q_A           97 GLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGC-LETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS  175 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred             HHHHHHHHHHHHHhccccccHHHHHHHHHHHHhhHHH-hhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777777777666   5556655455555555555444 4455566666776655 9999999999999999999999999


Q ss_pred             ee-ccCCCc---------------------cchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         265 IV-TDNTSV---------------------SQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       265 l~-~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      +. +..+..                     .+|+..|++.++..++..++....
T Consensus       176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~  229 (438)
T 3o7q_A          176 LILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLT  229 (438)
T ss_dssp             HHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHhcccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            98 542110                     018888887777666655555443

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.65  E-value=1.2e-15  Score=134.32  Aligned_cols=176  Identities=10%  Similarity=0.066  Sum_probs=137.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhc------ceeechhhhchHHHHHHHHHHHHHHHhHHHH-hhhcCcch
Q psy4758         106 SLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQ------FDIKSNGFLSAAPYLAQWILILVFSWLADYI-VAKQILSP  178 (318)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~  178 (318)
                      +|.++...+..++...+++....++|.|+++.+|      +++.+.+++.+...++..++.+++|+++||+ |+|+.+  
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~--   88 (524)
T 2xut_A           11 PRQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTI--   88 (524)
T ss_dssp             --CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHH--
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH--
Confidence            3566777788888888999999999999988889      9999999999999999999999999999999 999876  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC-chhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHH---HHHHHHH
Q psy4758         179 TVSRKMWNTIGLWGSAAALVGLSFVG-DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGF---TNGCANI  253 (318)
Q Consensus       179 ~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~---~~~~~~~  253 (318)
                              ..+.++..++.++....+ +...+....++.+.+.+ ...+....+..+..|++ |+++.+.   .+...++
T Consensus        89 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~  159 (524)
T 2xut_A           89 --------LWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSG-GIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINF  159 (524)
T ss_dssp             --------HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcc-ccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHH
Confidence                    667777777777777766 54434444455554443 34455556666766655 8766666   8899999


Q ss_pred             HHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         254 ASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       254 g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      |..++|.+.+.+.+.    .+|+..|++.+++.+++.+.....
T Consensus       160 g~~~g~~~~~~l~~~----~g~~~~f~~~~~~~~~~~~~~~~~  198 (524)
T 2xut_A          160 GSFFASLSMPLLLKN----FGAAVAFGIPGVLMFVATVFFWLG  198 (524)
T ss_dssp             HHHHHHHTSTHHHHT----SCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999887    689999998888777666555443

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.62  E-value=1.4e-15  Score=128.12  Aligned_cols=169  Identities=11%  Similarity=0.034  Sum_probs=130.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHH
Q psy4758         110 WAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIG  189 (318)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~  189 (318)
                      +.+.+..++...........+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+          ..+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~   71 (375)
T 2gfp_A            3 LMLVLLVAVGQMAQTIYIPAIADMARD-LNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVI----------LVG   71 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTT-SSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCC----------HHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH----------HHH
Confidence            344556666667777777788887666 899999999999999999999999999999999999988          667


Q ss_pred             HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCcc-chhhHHHHHHHHHHHHHhHhhhhhheeecc
Q psy4758         190 LWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN-FAGTLMGFTNGCANIASILGPLFVGFIVTD  268 (318)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  268 (318)
                      ..+..++.......++........++.+.+.. ...+....+..|..|+ +|++++++.+....+|..++|.+.+.+.+.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~  150 (375)
T 2gfp_A           72 MSIFMLATLVAVTTSSLTVLIAASAMQGMGTG-VGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTM  150 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCH
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-hhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence            77777777776666544434444444444433 3455555666666664 599999999999999999999999999887


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHHHH
Q psy4758         269 NTSVSQWQTIFLIAAAIFFFGNLIFL  294 (318)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (318)
                          .+|+..+.+.++..++..+...
T Consensus       151 ----~~~~~~~~~~~~~~~~~~~~~~  172 (375)
T 2gfp_A          151 ----WNWRACYLFLLVLCAGVTFSMA  172 (375)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHCCCC
T ss_pred             ----ccHHHHHHHHHHHHHHHHHHHH
Confidence                6899999888877766655333

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.45  E-value=2.3e-15  Score=128.69  Aligned_cols=171  Identities=13%  Similarity=0.091  Sum_probs=111.1

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHH
Q psy4758         102 AILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVS  181 (318)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  181 (318)
                      ..+|||+++......+.....+.....++|.|+++++|+++.+.|.+.+...++..++++++|+++||+|||+.+     
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l-----   76 (417)
T 2cfq_A            2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYL-----   76 (417)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHH-----
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH-----
Confidence            468899999998888888888888889999999988999999999999999999999999999999999999976     


Q ss_pred             HHHHHHHHHHHHHHH---HHHHHhcCch-hHHHHHHHHHHHHHhhhccccccccccccCc---cchhhHHHHHHHHHHHH
Q psy4758         182 RKMWNTIGLWGSAAA---LVGLSFVGDN-LVGAITCLTLAIAINAGTYTGFLSNHLDLSP---NFAGTLMGFTNGCANIA  254 (318)
Q Consensus       182 r~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~g  254 (318)
                           ..+..+..+.   .......+.. ..........+.. .+...+.......+..+   ++++.+.|..+...++|
T Consensus        77 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g  150 (417)
T 2cfq_A           77 -----LWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIY-LGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVG  150 (417)
T ss_dssp             -----HHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSS-TTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTH
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence                 3333332221   1110111000 0000000110000 01111111111222222   34677788888888999


Q ss_pred             HhHhhhhhheeeccCCCccchHHHHHHHHHHHHH
Q psy4758         255 SILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFF  288 (318)
Q Consensus       255 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~  288 (318)
                      ..++|.+.+++.+.     +|+..|++.++..++
T Consensus       151 ~~~~~~l~~~l~~~-----~~~~~f~~~~~~~~~  179 (417)
T 2cfq_A          151 WALGASIVGIMFTI-----NNQFVFWLGSGCALI  179 (417)
T ss_dssp             HHHHHHHHHHHHHH-----CSHHHHTTTTTTTTT
T ss_pred             HHHHHHHHHHHHHh-----chhHHHHHHHHHHHH
Confidence            99999999998764     467777766555433

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.01  E-value=3.3e-09  Score=92.43  Aligned_cols=142  Identities=15%  Similarity=0.086  Sum_probs=96.8

Q ss_pred             eechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHh------------------c
Q psy4758         142 IKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSF------------------V  203 (318)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~------------------~  203 (318)
                      ..+.|++.+...++.++|++++|+++||+|||+.+          .++.++..++.++..+                  .
T Consensus        54 ~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l----------~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a  123 (491)
T 4gc0_A           54 NSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL----------KIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLA  123 (491)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHH----------HHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH----------HHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHh
Confidence            34567788888899999999999999999999977          6666666666666553                  2


Q ss_pred             CchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCC----CccchHHH
Q psy4758         204 GDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNT----SVSQWQTI  278 (318)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~----~~~~~~~~  278 (318)
                      ++...+.+.-++.|.+.+. ..+....+..|..|.+ |+...++.+.....|..+++.+...+.+...    ....|+..
T Consensus       124 ~~~~~l~~~R~l~G~g~G~-~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (491)
T 4gc0_A          124 GYVPEFVIYRIIGGIGVGL-ASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYM  202 (491)
T ss_dssp             GCHHHHHHHHHHHHHHHHH-HHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHH
Confidence            3333355556666666544 4555666777777766 9999999999888888888777665544321    11356655


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy4758         279 FLIAAAIFFFGNLIFL  294 (318)
Q Consensus       279 ~~~~~~~~~~~~~~~~  294 (318)
                      +.......++..+...
T Consensus       203 ~~~~~~~~~~~~~~~~  218 (491)
T 4gc0_A          203 FASECIPALLFLMLLY  218 (491)
T ss_dssp             HHTTHHHHHHHHHHGG
T ss_pred             hhhhhhhhhhhhhhhh
Confidence            5555554444444333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	318
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	5e-10

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 57.8 bits (138), Expect = 5e-10
 Identities = 44/298 (14%), Positives = 94/298 (31%), Gaps = 10/298 (3%)

Query: 1   MSKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAW 60
           M  W    ER  + S        G  +   +  L       W +  Y+    AI+ A   
Sbjct: 141 MVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFA 200

Query: 61  CYIGANSPAQHPFISLEER--IYIETSLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLC 118
             +  ++P       +EE    Y +     +    ++ ++  + +L +  +W + I ++ 
Sbjct: 201 FAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVF 260

Query: 119 QNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSP 178
                + +L   P+Y+  V  F +  + +       A     L+  W++D +        
Sbjct: 261 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG-- 318

Query: 179 TVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPN 238
                    + L   A  +  ++  G+  V  I  + +   I        L         
Sbjct: 319 ---ATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKK 375

Query: 239 FAGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF 296
            AGT  GFT     +   +    +     D      W   F++         ++ ++ 
Sbjct: 376 AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVV 430

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	318
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.96
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.81
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.62
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.61

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=7.3e-29  Score=212.18  Aligned_cols=286  Identities=15%  Similarity=0.160  Sum_probs=203.5

Q ss_pred             CccCCCCCchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhh
Q psy4758           2 SKWAPPMERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIY   81 (318)
Q Consensus         2 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (318)
                      +|++|+++|++++++.+.+..+|.++++.+++.+.....+||+.|++.+.+.++..++.+++++|.|++.+....++.+.
T Consensus       142 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (447)
T d1pw4a_         142 VHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKN  221 (447)
T ss_dssp             HTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCC
T ss_pred             HHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhhh
Confidence            68999999999999999999999999999988876643689999999999998888888888888776544322222111


Q ss_pred             hhh--ccCccccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHH
Q psy4758          82 IET--SLVHSSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWIL  159 (318)
Q Consensus        82 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~  159 (318)
                      ...  ..++.+++...++...+.++++|.++......++.....+....+.|.|+.+.++++..+.+.......+..+++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (447)
T d1pw4a_         222 DYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPG  301 (447)
T ss_dssp             C-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhh
Confidence            111  111111111333445667888999999999999999999999999999999989999999999999999999999


Q ss_pred             HHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhH--HHHHHHHHHHHHhhhccccccccccccCc
Q psy4758         160 ILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLV--GAITCLTLAIAINAGTYTGFLSNHLDLSP  237 (318)
Q Consensus       160 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (318)
                      .++.|++.||+++++...       .......+..++............  ..+..+..+.+ .....+.......|..|
T Consensus       302 ~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p  373 (447)
T d1pw4a_         302 TLLCGWMSDKVFRGNRGA-------TGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFL-IYGPVMLIGLHALELAP  373 (447)
T ss_dssp             HHHHHHHHHHTSTTCHHH-------HHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHH-HTHHHHHHHHHHHHTSC
T ss_pred             hhhhhhhhhhcccccccc-------ccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence            999999999999876331       112222333333333333332222  22233333333 33334455556667777


Q ss_pred             cc-hhhHHHHHHHHHHHH-HhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Q psy4758         238 NF-AGTLMGFTNGCANIA-SILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       238 ~~-~~~~~g~~~~~~~~g-~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (318)
                      ++ ||++.|+.+...+++ ..++|.+.|++.|.    .+|...+++.+++.+++.++...+.++
T Consensus       374 ~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~  433 (447)
T d1pw4a_         374 KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF----FGWDGGFMVMIGGSILAVILLIVVMIG  433 (447)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS----SCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            76 999999999998885 45689999999998    678888888877777776666555443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=8.1e-20  Score=153.32  Aligned_cols=264  Identities=11%  Similarity=0.067  Sum_probs=176.3

Q ss_pred             CchhHHHHHHhhHhhHHHhHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHhhhhhhccCc
Q psy4758           9 ERARLFSFAFSGTQFGNLVTLPVAGLLAGSPWGWPSIFYVSGAVAIVWAAAWCYIGANSPAQHPFISLEERIYIETSLVH   88 (318)
Q Consensus         9 ~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (318)
                      ++.+..+........+..+++.+++.+.+  .+|+..+........+..++..+..+|.+++.+..+++++..       
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  205 (417)
T d1pv7a_         135 RSNFEFGRARMFGCVGWALGASIVGIMFT--INNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANH-------  205 (417)
T ss_dssp             HHSCCHHHHHHHHHHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSSHHHHSCC-------
T ss_pred             hhHHHHHHHhhhhcccccccccccccccc--ccccccccchhhHHHHHHHHHHHHhcccccchhhhhhhhhhc-------
Confidence            45567778888889999999999999887  577788877777777776777777777665443222111110       


Q ss_pred             cccccccCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHH
Q psy4758          89 SSTVSSSMKVPWKAILTSLPVWAVLITHLCQNWGYWTLLTE---MPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSW  165 (318)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~  165 (318)
                          .+.......+.++++..+...................   .+.+..+..+.+....+.......++..++..+.++
T Consensus       206 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (417)
T d1pv7a_         206 ----SAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPL  281 (417)
T ss_dssp             ----CCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred             ----ccccccccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhcccccccccccccchhhhhh
Confidence                0111222333444444444333333333333333222   222233335666777778888888899999999999


Q ss_pred             hHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHH
Q psy4758         166 LADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLM  244 (318)
Q Consensus       166 l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  244 (318)
                      +.||.++++.+          ..+..+..++.+.+...++.+......++.+.+... ..+....+..+..|++ |+++.
T Consensus       282 l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~  350 (417)
T d1pv7a_         282 IINRIGGKNAL----------LLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPF-LLVGCFKYITSQFEVRFSATIY  350 (417)
T ss_dssp             HHHHHCHHHHH----------HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHSCGGGHHHHH
T ss_pred             hhcccccccch----------hhhHHHHHHhhhccccccccchhhHHHHHHHHHHHH-HHHHHHHHHHHHCCHhHHHHHH
Confidence            99999999876          667777777777777777666444444444444443 4455555666666665 99999


Q ss_pred             HHH-HHHHHHHHhHhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Q psy4758         245 GFT-NGCANIASILGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIFGTSE  300 (318)
Q Consensus       245 g~~-~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
                      |+. +....+|..++|.+.|++.|.    .+++..+++.+++.++..++..+..+++
T Consensus       351 ~~~~~~~~~~g~~i~~~~~G~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~l~~~  403 (417)
T d1pv7a_         351 LVCFCFFKQLAMIFMSVLAGNMYES----IGFQGAYLVLGLVALGFTLISVFTLSGP  403 (417)
T ss_dssp             HHHHTTTHHHHHHHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            985 556779999999999999998    7889999988888887777766665443

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=1.3e-15  Score=129.19  Aligned_cols=157  Identities=15%  Similarity=0.137  Sum_probs=114.6

Q ss_pred             HhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHhcC--
Q psy4758         127 LTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSRKMWNTIGLWGSAAALVGLSFVG--  204 (318)
Q Consensus       127 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--  204 (318)
                      ....| +++| +|+|..+.|++.+...++..++.+++|+++||+|||+.+          ..+.++..++.++.....  
T Consensus        45 ~~~~p-~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~----------~~~~~~~~~~~~~~~~~~~~  112 (447)
T d1pw4a_          45 ALAMP-YLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL----------PAGLILAAAVMLFMGFVPWA  112 (447)
T ss_dssp             HHHHH-HTTS-STTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH----------HHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHHH-HHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHhhccccchh
Confidence            33344 5666 799999999999999999999999999999999999976          666666666666665543  


Q ss_pred             --chhHHHHHHHHHHHHHhhhccccccccccccCccc-hhhHHHHHHHHHHHHHhHhhhhhheeeccCCCccchHHHHHH
Q psy4758         205 --DNLVGAITCLTLAIAINAGTYTGFLSNHLDLSPNF-AGTLMGFTNGCANIASILGPLFVGFIVTDNTSVSQWQTIFLI  281 (318)
Q Consensus       205 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~  281 (318)
                        +.....+..++.+.+. +...+....+..+..|++ |++++++.+....+|..++|.+.+.+.+..   .+|+..+++
T Consensus       113 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~---~~w~~~~~~  188 (447)
T d1pw4a_         113 TSSIAVMFVLLFLCGWFQ-GMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWF---NDWHAALYM  188 (447)
T ss_dssp             HSSSSHHHHHHHHHHHHH-HHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHT---CCSTTCTHH
T ss_pred             hhhHHHHHHHHHHHHHhh-hhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhh---hcccccchh
Confidence              2222344444444443 334455555666666655 999999999999999999999988877663   467888887


Q ss_pred             HHHHHHHHHHHHHhhccc
Q psy4758         282 AAAIFFFGNLIFLIFGTS  299 (318)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~  299 (318)
                      .+.+.++..++.+...++
T Consensus       189 ~~~~~~~~~~~~~~~~~~  206 (447)
T d1pw4a_         189 PAFCAILVALFAFAMMRD  206 (447)
T ss_dssp             HHHHHHHHHHHHHHHCCC
T ss_pred             hhhhHHHHHHHHHHhccc
Confidence            777776666665555443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=4.4e-16  Score=130.15  Aligned_cols=179  Identities=13%  Similarity=0.115  Sum_probs=118.1

Q ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcceeechhhhchHHHHHHHHHHHHHHHhHHHHhhhcCcchHHHH
Q psy4758         103 ILTSLPVWAVLITHLCQNWGYWTLLTEMPSYINSVLQFDIKSNGFLSAAPYLAQWILILVFSWLADYIVAKQILSPTVSR  182 (318)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~r  182 (318)
                      .+|||++|.+.+..++..........++|.|+++..|.|+.+.|++.+...++..++.++.|+++||+|||+.+      
T Consensus         3 ~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l------   76 (417)
T d1pv7a_           3 YLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYL------   76 (417)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHH------
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH------
Confidence            57899999999999999999888899999999988999999999999999999999999999999999999976      


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH----HHhhhccccccccccccCcc--chhhHHHHHHHHHHHHHh
Q psy4758         183 KMWNTIGLWGSAAALVGLSFVGDNLVGAITCLTLAI----AINAGTYTGFLSNHLDLSPN--FAGTLMGFTNGCANIASI  256 (318)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~  256 (318)
                          ..+.....++.................+....    ..................++  ++....+........+..
T Consensus        77 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (417)
T d1pv7a_          77 ----LWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWA  152 (417)
T ss_dssp             ----HHHHHHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhccccc
Confidence                45555555555555444333221111111111    11111111111111111222  255667777778888888


Q ss_pred             HhhhhhheeeccCCCccchHHHHHHHHHHHHHHHHHHHhh
Q psy4758         257 LGPLFVGFIVTDNTSVSQWQTIFLIAAAIFFFGNLIFLIF  296 (318)
Q Consensus       257 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (318)
                      ++|.+.+.+.+.    .. ...+........+..++....
T Consensus       153 ~~~~~~~~l~~~----~~-~~~~~~~~~~~~~~~~~~~~~  187 (417)
T d1pv7a_         153 LGASIVGIMFTI----NN-QFVFWLGSGCALILAVLLFFA  187 (417)
T ss_dssp             HHHHHHHHHHHH----CH-HHHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccccc----cc-cccccchhhHHHHHHHHHHHH
Confidence            999999988776    33 344444444444433333333