Psyllid ID: psy4798

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620---
MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTVSSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSMIVMQLNLLFMLYSFQYLFQYPPLYSAFGFYDSQPILLGLIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGKAIFLRKALLKINKDNLGFPALLVCNGLPYFWSKSEELGETYFGFHKNEIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKAGDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSMILKKEFGVANKEREASVMRYVTKESELITARQDREAAEKKYKEAMKEKDNVMAKLKVLSTDKARLTQLYDDKVRMYNVR
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccccEEEEEcccccccccEEEEccccccEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccccEEEEEcccccccccEEEEcccccEEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHcEEEEEcccccccccEEEEccccccEEEEEHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHEEEEEEEHHcccccccHHHHHHHHHHHHHHHHHHHccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccEEEEEEcccccccccEEEEccccccEEEEEHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEccccHHHHHHccccEEEEEcc
MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRrvyhettivphqiahgmdaesfeksrrysldKNVFSMFKETVSNVMNTVsskrsehsnayfygffknKRIVLFDTLLkdyvplnadkkdksgdseplistegankkgcdTEEVLAVLAHELGHWKYNHVLKSMIVMQLNLLFMLYSFQylfqypplysafgfydsqpILLGLIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGKAIFLRKALLKInkdnlgfpallvcnglpyfwskseelgetyfgfhkneivTSCLFIVLFNIFStviglpisfYHHFVLeekhgfnkqtygfFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIypefiaplfdkytplpdgeLKSRIEQLSAsvkfplkklyvvegskrsehsnayfygffknKRIVLFDTLLkdyvplnadkkdkagdseplistegankkgcdTEEVLAVLAHELGHWKYNHVLKSMILKKEFGVANKEREASVMRYVTKESELITARQDREAAEKKYKEAMKEKDNVMAKLKVLSTDKARLTQLYDDKVRMYNVR
MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETtivphqiahgmdaesfEKSRRYSLDKNVFSMFKETVSNVMNtvsskrsehsNAYFYGFFKNKRIVLFDTLLKDYVPlnadkkdksgdseplistegankkgcdTEEVLAVLAHELGHWKYNHVLKSMIVMQLNLLFMLYSFQYLFQYPPLYSAFGFYDSQPILLGLIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGKAIFLRKALLKINKDNLGFPALLVCNGLPYFWSKSEELGETYFGFHKNEIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQlsasvkfplKKLYVVegskrsehsnAYFYGFFKNKRIVLFDTLLKDYVPLnadkkdkagdseplistegankkgcDTEEVLAVLAHELGHWKYNHVLKSMILKKEFGVANKEREASVMryvtkeselitarqdREAAEKKYKEamkekdnvmaklkvlstdkarltqlyddkvrmynvr
MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTVSSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSMIVMQLNLLFMLYSFQYLFQYPPLYSAFGFYDSQPILLGLIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGKAIFLRKALLKINKDNLGFPALLVCNGLPYFWSKSEELGETYFGFHKNEIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKAGDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSMILKKEFGVANKEREASVMRYVTKESELITARQDReaaekkykeamkekDNVMAKLKVLSTDKARLTQLYDDKVRMYNVR
**FTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMD*********YSLDKNVFSMFKETVSNV************NAYFYGFFKNKRIVLFDTLLKDYVPL************************CDTEEVLAVLAHELGHWKYNHVLKSMIVMQLNLLFMLYSFQYLFQYPPLYSAFGFYDSQPILLGLIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGKAIFLRKALLKINKDNLGFPALLVCNGLPYFWSKSEELGETYFGFHKNEIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLN***********************CDTEEVLAVLAHELGHWKYNHVLKSMILKKEFGVANK*****VMRYV*******************************************LTQLY**********
*EFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTVSSKRSEHSNAYFYGFFKNKRIVLFDTLLKD*******************************EEVLAVLAHELGHWKYNHVLKSMIVMQLNLLFMLYSFQYLFQYPPLYSAFGFYDSQPILLGLIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGKAIFLRKALLKINKDNLGFPALLVCNGLPYFWSKSEELGETYFGFHKNEIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYV******************************EVLAVLAHELGHWKYNHVLKSMILKKEFGVANKEREASVMRYVTKESELITARQDREAAEKKYKEAMKEKDNVMAKLKVLSTDKARLTQLYDDKVRMY***
MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTVSSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSMIVMQLNLLFMLYSFQYLFQYPPLYSAFGFYDSQPILLGLIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGKAIFLRKALLKINKDNLGFPALLVCNGLPYFWSKSEELGETYFGFHKNEIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKAGDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSMILKKEFGVANKEREASVMRYVTKESELITAR**********KEAMKEKDNVMAKLKVLSTDKARLTQLYDDKVRMYNVR
MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTVSSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYV*************************GCDTEEVLAVLAHELGHWKYNHVLKSMIVMQLNLLFMLYSFQYLFQYPPLYSAFGFYDSQPILLGLIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGKAIFLRKALLKINKDNLGFPALLVCNGLPYFWSKSEELGETYFGFHKNEIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYV*************************GCDTEEVLAVLAHELGHWKYNHVLKSMILKKEFGVANKEREASVMRYVTKESELITARQDREAAEKKYKEAMKEKDNVMAKLKVLSTDKARLTQLYDDKVRMYNVR
oooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTVSSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSMIVMQLNLLFMLYSFQYLFQYPPLYSAFGFYDSQPILLGLIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGKAIFLRKALLKINKDNLGFPALLVCNGLPYFWSKSEELGETYFGFHKNEIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKAGDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSMILKKEFGVANKEREASVMRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKARLTQLYDDKVRMYNVR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query623 2.2.26 [Sep-21-2011]
O75844475 CAAX prenyl protease 1 ho yes N/A 0.446 0.585 0.425 3e-69
Q80W54475 CAAX prenyl protease 1 ho yes N/A 0.406 0.532 0.452 3e-68
Q8RX88424 CAAX prenyl protease 1 ho yes N/A 0.357 0.525 0.408 5e-54
Q6EPN8425 CAAX prenyl protease 1 ho yes N/A 0.346 0.508 0.411 4e-50
Q54FH7426 CAAX prenyl protease 1 ho yes N/A 0.341 0.5 0.366 8e-40
Q10071474 Probable CAAX prenyl prot yes N/A 0.359 0.472 0.349 8e-37
P47154453 CAAX prenyl protease 1 OS yes N/A 0.282 0.388 0.376 5e-35
P40769426 Uncharacterized metallopr yes N/A 0.325 0.476 0.296 7e-16
Q8C9S4 917 Uncharacterized protein C no N/A 0.110 0.075 0.420 2e-05
Q7Z3E2 898 Uncharacterized protein C no N/A 0.110 0.076 0.434 5e-05
>sp|O75844|FACE1_HUMAN CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2 Back     alignment and function desciption
 Score =  263 bits (673), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 141/331 (42%), Positives = 200/331 (60%), Gaps = 53/331 (16%)

Query: 238 GKSLGKAIFLRKALLKINKDNLGFPA----------LLVCNGLPYFWSKSEELGETYFGF 287
           G+ +    F +  L +++K    F +          +L+  G+PY W  S      Y GF
Sbjct: 56  GQIMDSETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGIPYLWRLSGRFC-GYAGF 114

Query: 288 HKN-EIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVS 346
               EI  S +F++L  +FS + GLP S Y+ FV+EEKHGFN+QT GF            
Sbjct: 115 GPEYEITQSLVFLLLATLFSALTGLPWSLYNTFVIEEKHGFNQQTLGF------------ 162

Query: 347 LILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWV 406
                               F+KD IK F+V+  + +P++  ++YII++GG+  F+Y W+
Sbjct: 163 --------------------FMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWL 202

Query: 407 FIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSE 466
           F +++SL L+TIY ++IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS 
Sbjct: 203 FTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSS 262

Query: 467 HSNAYFYGFFKNKRIVLFDTLLKDYVPLNAD---------KKDKAGDSEPLISTEGANKK 517
           HSNAYFYGFFKNKRIVLFDTLL++Y  LN D         + ++ G+SE + +     K+
Sbjct: 263 HSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQ 322

Query: 518 GCDTEEVLAVLAHELGHWKYNHVLKSMILKK 548
           GC  EEVLAVL HELGHWK  H +K++I+ +
Sbjct: 323 GCKNEEVLAVLGHELGHWKLGHTVKNIIISQ 353
Proteolytically removes the C-terminal three residues of farnesylated proteins. Acts on lamin A/C.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 8EC: 4
>sp|Q80W54|FACE1_MOUSE CAAX prenyl protease 1 homolog OS=Mus musculus GN=Zmpste24 PE=1 SV=2 Back     alignment and function description
>sp|Q8RX88|FACE1_ARATH CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1 PE=1 SV=1 Back     alignment and function description
>sp|Q6EPN8|FACE1_ORYSJ CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1 Back     alignment and function description
>sp|Q54FH7|FACE1_DICDI CAAX prenyl protease 1 homolog OS=Dictyostelium discoideum GN=zmpste24 PE=3 SV=1 Back     alignment and function description
>sp|Q10071|STE24_SCHPO Probable CAAX prenyl protease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.05 PE=3 SV=1 Back     alignment and function description
>sp|P47154|STE24_YEAST CAAX prenyl protease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE24 PE=1 SV=1 Back     alignment and function description
>sp|P40769|YHFN_BACSU Uncharacterized metalloprotease YhfN OS=Bacillus subtilis (strain 168) GN=yhfN PE=3 SV=2 Back     alignment and function description
>sp|Q8C9S4|CJ118_MOUSE Uncharacterized protein C10orf118 homolog OS=Mus musculus GN=Otg1 PE=2 SV=2 Back     alignment and function description
>sp|Q7Z3E2|CJ118_HUMAN Uncharacterized protein C10orf118 OS=Homo sapiens GN=C10orf118 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query623
283483330452 putative CAAX prenyl protease [Chorthipp 0.428 0.590 0.503 2e-74
321461065445 hypothetical protein DAPPUDRAFT_308569 [ 0.393 0.550 0.482 4e-71
41054035468 CAAX prenyl protease 1 homolog [Danio re 0.446 0.594 0.443 5e-71
94732932468 novel protein (zgc:55655) [Danio rerio] 0.446 0.594 0.443 5e-71
242013454465 caax prenyl protease ste24, putative [Pe 0.398 0.533 0.489 1e-70
432936822467 PREDICTED: CAAX prenyl protease 1 homolo 0.438 0.584 0.438 2e-70
182891830468 Zmpste24 protein [Danio rerio] 0.446 0.594 0.440 3e-70
348531547467 PREDICTED: CAAX prenyl protease 1 homolo 0.438 0.584 0.435 4e-70
410898118467 PREDICTED: CAAX prenyl protease 1 homolo 0.447 0.597 0.428 5e-70
332021115392 CAAX prenyl protease 1-like protein [Acr 0.409 0.650 0.465 7e-70
>gi|283483330|emb|CAX20735.1| putative CAAX prenyl protease [Chorthippus parallelus] Back     alignment and taxonomy information
 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 154/306 (50%), Positives = 196/306 (64%), Gaps = 39/306 (12%)

Query: 247 LRKALLKINKDNLGFP---ALLVCNGLPYFWSKSEELGETY-FGFHKNEIVTSCLFIVLF 302
           L K    I KD  G     A+++ +G+PYFW  S  +   + +G H NEI+ S +F  + 
Sbjct: 61  LDKCTFTIVKDIFGMVLSVAIMLFDGIPYFWDLSTRIISAFGYGSH-NEILQSVMFGFIL 119

Query: 303 NIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQ 362
             FST+I LP+  Y+ FVLE+KHGFNKQT G                             
Sbjct: 120 YTFSTIINLPLVVYNTFVLEKKHGFNKQTVG----------------------------- 150

Query: 363 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 422
              FFVKD++KSF VS ++  PL  ++VYI+Q+GG   FLYLW+F +LMS+FL+TIYP +
Sbjct: 151 ---FFVKDKLKSFAVSQVIFTPLLASMVYIVQIGGKYFFLYLWIFSVLMSVFLLTIYPNY 207

Query: 423 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV 482
           IAPLFDKYTPLPDGELK++IE+L+AS+ FPL KLYVVEGSKRS HSNAYFYGFFKNKRIV
Sbjct: 208 IAPLFDKYTPLPDGELKTKIEKLAASIDFPLYKLYVVEGSKRSTHSNAYFYGFFKNKRIV 267

Query: 483 LFDTLLKDYVPLNADKKDKAGDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLK 542
           LFDTLLKDY P N    +   + +    +    KKGCDT+EVLAVL HELG      +L 
Sbjct: 268 LFDTLLKDYTPENKSPGEHKPEEQE--KSPTGEKKGCDTDEVLAVLGHELGXTGTEXILX 325

Query: 543 SMILKK 548
           + I+ +
Sbjct: 326 NFIIAQ 331

Source: Chorthippus parallelus

Species: Chorthippus parallelus

Genus: Chorthippus

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|321461065|gb|EFX72100.1| hypothetical protein DAPPUDRAFT_308569 [Daphnia pulex] Back     alignment and taxonomy information
>gi|41054035|ref|NP_956186.1| CAAX prenyl protease 1 homolog [Danio rerio] gi|28422776|gb|AAH46884.1| Zinc metallopeptidase, STE24 homolog [Danio rerio] Back     alignment and taxonomy information
>gi|94732932|emb|CAK04159.1| novel protein (zgc:55655) [Danio rerio] Back     alignment and taxonomy information
>gi|242013454|ref|XP_002427421.1| caax prenyl protease ste24, putative [Pediculus humanus corporis] gi|212511801|gb|EEB14683.1| caax prenyl protease ste24, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|432936822|ref|XP_004082296.1| PREDICTED: CAAX prenyl protease 1 homolog [Oryzias latipes] Back     alignment and taxonomy information
>gi|182891830|gb|AAI65348.1| Zmpste24 protein [Danio rerio] Back     alignment and taxonomy information
>gi|348531547|ref|XP_003453270.1| PREDICTED: CAAX prenyl protease 1 homolog [Oreochromis niloticus] Back     alignment and taxonomy information
>gi|410898118|ref|XP_003962545.1| PREDICTED: CAAX prenyl protease 1 homolog [Takifugu rubripes] Back     alignment and taxonomy information
>gi|332021115|gb|EGI61502.1| CAAX prenyl protease 1-like protein [Acromyrmex echinatior] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query623
ZFIN|ZDB-GENE-030131-6312468 zmpste24 "zinc metallopeptidas 0.300 0.399 0.572 2.3e-74
UNIPROTKB|F1NDA2468 ZMPSTE24 "Uncharacterized prot 0.300 0.399 0.574 3.7e-74
UNIPROTKB|F1PY82473 ZMPSTE24 "Uncharacterized prot 0.300 0.395 0.556 7.6e-74
UNIPROTKB|E1BMF2475 ZMPSTE24 "Uncharacterized prot 0.300 0.393 0.551 2e-73
UNIPROTKB|O75844475 ZMPSTE24 "CAAX prenyl protease 0.298 0.391 0.558 1.8e-72
RGD|1305570475 Zmpste24 "zinc metallopeptidas 0.300 0.393 0.545 9.7e-72
MGI|MGI:1890508475 Zmpste24 "zinc metallopeptidas 0.300 0.393 0.540 1.2e-71
FB|FBgn0034176451 ste24a "prenyl protease type I 0.279 0.385 0.589 4.2e-61
TAIR|locus:2124983424 ATSTE24 [Arabidopsis thaliana 0.343 0.504 0.422 1.5e-59
WB|WBGene00001405442 fce-1 [Caenorhabditis elegans 0.295 0.416 0.518 2.3e-56
ZFIN|ZDB-GENE-030131-6312 zmpste24 "zinc metallopeptidase, STE24 homolog" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 594 (214.2 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
 Identities = 111/194 (57%), Positives = 148/194 (76%)

Query:   362 QTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPE 421
             QT GFF+KD +K F V+  + +P+T  ++YII++GG+  F+Y W+F  ++SL L+TIY +
Sbjct:   153 QTLGFFLKDALKKFAVTQCILVPVTSLLLYIIKIGGDYFFIYAWLFTFIVSLILVTIYAD 212

Query:   422 FIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRI 481
             +IAPLFDK+TPLPDGEL+S IE ++ S+ FPL KLYVVEGSKRS HSNAYFYGFFKNKRI
Sbjct:   213 YIAPLFDKFTPLPDGELRSEIESMAKSISFPLTKLYVVEGSKRSSHSNAYFYGFFKNKRI 272

Query:   482 VLFDTLLKDYVPLN--ADKKDKAGD-SEPLISTEGA---NKK-GCDTEEVLAVLAHELGH 534
             VLFDTLL+DY PLN   +K+   G+ +E +++   A   NKK GC   EVLAVL HELGH
Sbjct:   273 VLFDTLLEDYSPLNQSGEKEPGTGEENEAVVNESKAKPKNKKQGCSNPEVLAVLGHELGH 332

Query:   535 WKYNHVLKSMILKK 548
             WK  H +K++++ +
Sbjct:   333 WKLGHTVKNIVISQ 346
GO:0004222 "metalloendopeptidase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
GO:0071586 "CAAX-box protein processing" evidence=IEA
GO:0008233 "peptidase activity" evidence=IEA
UNIPROTKB|F1NDA2 ZMPSTE24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PY82 ZMPSTE24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BMF2 ZMPSTE24 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O75844 ZMPSTE24 "CAAX prenyl protease 1 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1305570 Zmpste24 "zinc metallopeptidase STE24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1890508 Zmpste24 "zinc metallopeptidase, STE24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0034176 ste24a "prenyl protease type I" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TAIR|locus:2124983 ATSTE24 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00001405 fce-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.24.84LOW CONFIDENCE prediction!
3rd Layer3.4.240.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query623
pfam01435223 pfam01435, Peptidase_M48, Peptidase family M48 7e-24
pfam01435223 pfam01435, Peptidase_M48, Peptidase family M48 4e-23
COG0501302 COG0501, HtpX, Zn-dependent protease with chaperon 3e-14
COG0501302 COG0501, HtpX, Zn-dependent protease with chaperon 2e-09
PRK03982288 PRK03982, PRK03982, heat shock protein HtpX; Provi 1e-05
PRK02870336 PRK02870, PRK02870, heat shock protein HtpX; Provi 4e-05
>gnl|CDD|216503 pfam01435, Peptidase_M48, Peptidase family M48 Back     alignment and domain information 
 Score = 99.8 bits (249), Expect = 7e-24
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 35/143 (24%)

Query: 407 FIILMSLFLMTIYPEFIAPLFDK-YTPLPDGELKSRIEQLSASV--KFPLKKLYVVEGSK 463
            ++L SL L TI   +IA L +   TPL +  L+  +E+L+ S    FP  ++YVV+   
Sbjct: 2   LLLLSSLVLATIGAPYIAQLLNGFPTPLRNARLQRVVERLADSAGAGFPPWEVYVVD--- 58

Query: 464 RSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKAGDSEPLISTEGANKKGCDTEE 523
            S   NA+  G  KNKR+V+   LL                                 +E
Sbjct: 59  -SPQPNAFALGGGKNKRVVVTTGLL--------LALT--------------------EDE 89

Query: 524 VLAVLAHELGHWKYNHVLKSMIL 546
           + AVL HE+GH K  H ++SM  
Sbjct: 90  LAAVLGHEIGHIKARHSVESMSQ 112

Length = 223
>gnl|CDD|216503 pfam01435, Peptidase_M48, Peptidase family M48 Back     alignment and domain information
>gnl|CDD|223575 COG0501, HtpX, Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|223575 COG0501, HtpX, Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|235186 PRK03982, PRK03982, heat shock protein HtpX; Provisional Back     alignment and domain information
>gnl|CDD|235081 PRK02870, PRK02870, heat shock protein HtpX; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 623
KOG2719|consensus428 100.0
KOG2719|consensus428 100.0
PRK03001283 M48 family peptidase; Provisional 100.0
PRK03982288 heat shock protein HtpX; Provisional 100.0
PRK01265324 heat shock protein HtpX; Provisional 99.97
PRK01265324 heat shock protein HtpX; Provisional 99.97
PRK01345317 heat shock protein HtpX; Provisional 99.96
PRK04897298 heat shock protein HtpX; Provisional 99.96
PRK02391296 heat shock protein HtpX; Provisional 99.96
PRK03982288 heat shock protein HtpX; Provisional 99.96
PRK02391296 heat shock protein HtpX; Provisional 99.96
PRK03072288 heat shock protein HtpX; Provisional 99.96
PRK04897298 heat shock protein HtpX; Provisional 99.96
PRK02870336 heat shock protein HtpX; Provisional 99.96
PRK03072288 heat shock protein HtpX; Provisional 99.96
PRK03001283 M48 family peptidase; Provisional 99.96
PRK05457284 heat shock protein HtpX; Provisional 99.96
PRK02870336 heat shock protein HtpX; Provisional 99.95
PRK05457284 heat shock protein HtpX; Provisional 99.95
PRK01345317 heat shock protein HtpX; Provisional 99.95
PF01435226 Peptidase_M48: Peptidase family M48 This is family 99.9
COG0501302 HtpX Zn-dependent protease with chaperone function 99.89
COG0501302 HtpX Zn-dependent protease with chaperone function 99.86
PF01435226 Peptidase_M48: Peptidase family M48 This is family 99.81
COG4783 484 Putative Zn-dependent protease, contains TPR repea 99.34
PF05569299 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR0 99.29
PF05569299 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR0 99.03
KOG2661|consensus424 98.95
COG4783484 Putative Zn-dependent protease, contains TPR repea 98.82
COG4784 479 Putative Zn-dependent protease [General function p 98.69
COG4219337 MecR1 Antirepressor regulating drug resistance, pr 98.47
COG4784479 Putative Zn-dependent protease [General function p 98.11
KOG2661|consensus424 98.03
COG4219337 MecR1 Antirepressor regulating drug resistance, pr 97.71
PF06114122 DUF955: Domain of unknown function (DUF955); Inter 97.13
PF04228292 Zn_peptidase: Putative neutral zinc metallopeptida 96.63
PF06114122 DUF955: Domain of unknown function (DUF955); Inter 95.42
PF01863205 DUF45: Protein of unknown function DUF45; InterPro 95.28
PRK04351149 hypothetical protein; Provisional 94.79
COG1451223 Predicted metal-dependent hydrolase [General funct 94.68
PF01863205 DUF45: Protein of unknown function DUF45; InterPro 94.15
PF1369979 DUF4157: Domain of unknown function (DUF4157) 93.34
PF04298222 Zn_peptidase_2: Putative neutral zinc metallopepti 92.14
COG1451223 Predicted metal-dependent hydrolase [General funct 90.91
PF10026195 DUF2268: Predicted Zn-dependent protease (DUF2268) 90.65
PF10463206 Peptidase_U49: Peptidase U49; InterPro: IPR019504 90.21
smart00731146 SprT SprT homologues. Predicted to have roles in t 89.71
PF10263157 SprT-like: SprT-like family; InterPro: IPR006640 T 88.0
PF04450205 BSP: Peptidase of plants and bacteria; InterPro: I 85.66
PF04228292 Zn_peptidase: Putative neutral zinc metallopeptida 85.24
PF04298222 Zn_peptidase_2: Putative neutral zinc metallopepti 82.18
PF13203 292 DUF2201_N: Putative metallopeptidase domain 80.61
PF08325186 WLM: WLM domain; InterPro: IPR013536 The WLM (WSS1 80.12
>KOG2719|consensus Back     alignment and domain information 
Probab=100.00  E-value=7.8e-62  Score=517.95  Aligned_cols=285  Identities=45%  Similarity=0.762  Sum_probs=249.6

Q ss_pred             hhccchhhhhHHhhhhhhhhccCCccchHHHHHHHHHHHHHHHHhhhccHHHhhhcccccccCCCcccHHHHHHHHHHHH
Q psy4798         264 LLVCNGLPYFWSKSEELGETYFGFHKNEIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSF  343 (623)
Q Consensus       264 iL~~g~~~~lw~~s~~~~~~~~~~~~~~~~~~~~f~~~~~l~~~li~lP~~~Y~~f~le~~~Gfn~~T~~~f~~d~vk~~  343 (623)
                      .++++.+|++|.+++++...     ..|++++++|+.+.+.+++++++|+++|++|++|+|||||+||.+.|++|.+|+.
T Consensus        82 ~L~~g~~~~lw~lt~~~~~~-----~~~~~~s~vF~~~~s~~~~l~~LP~~iys~fvie~~~gfnk~t~~~~~~d~lk~~  156 (428)
T KOG2719|consen   82 ELYLGALPFLWKLTGKFLGK-----AGEIWLSLVFLLLLSIYSTLLDLPSSIYSTFVLEEKHGFNKQTLSLFIIDGLKSL  156 (428)
T ss_pred             HHHHhHHHHHHHHHHHHhhh-----hhhhhhhhHHHHHHHHHHHHHhccHHHHHHHHHHhhcCCCcCcchhHHHHHHHHH
Confidence            46678999999999987541     2389999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccccccchhhhhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHhhchHhh
Q psy4798         344 IVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFI  423 (623)
Q Consensus       344 ~l~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~pl~~~~~~li~~~g~~~~l~~w~~~~~~~l~~~~i~P~~I  423 (623)
                      ++++                                ++++|+++++.+++..+|++|.+|+|++..++++++++++|.+|
T Consensus       157 ~v~~--------------------------------~l~~Pi~~~iv~i~~~~g~yF~i~~w~f~~v~~l~l~ti~p~~i  204 (428)
T KOG2719|consen  157 LVGV--------------------------------VLTIPIVAAIVMILKKFGPYFFIYLWLFYFVLSLLLLTIYPGFI  204 (428)
T ss_pred             HHHH--------------------------------HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999                                89999999999999999999999999999999999999999999


Q ss_pred             hhhhccCCcCCchhHHHHHHHHHHHcCCCCCeEEEEeCCCCCCcccEEEeccCCCceEEEehhHHhhccCCCccccCCCC
Q psy4798         424 APLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKAG  503 (623)
Q Consensus       424 ~plf~k~~pl~~~~L~~~I~~la~~~gfp~~~v~vv~~s~rs~~~NAy~~G~~~~krIVL~dtLl~~~~~~~~~~~~~~~  503 (623)
                      +|+|+|++|+++++||++||++|++.|||.++++|++||+||+|+|||++|+|++||||+||||+.+             
T Consensus       205 ~P~f~K~~PLe~g~l~~~Ie~la~s~gfp~~k~~vi~~s~rs~hsNAyfyG~~~~KRIvIyDtLl~~-------------  271 (428)
T KOG2719|consen  205 APLFGKFTPLEEGDLKEKIERLADSVGFPLSKYRVIDGSKRSSHSNAYFYGLCKNKRIVIYDTLLLE-------------  271 (428)
T ss_pred             hhhhcCCCCCCCCchHHHHHHHHHhcCCCceEEEEEecCCCCCCCCeeeeeccccceEEEehhhhhh-------------
Confidence            9999999999999999999999999999999999999999999999999999999999999999941             


Q ss_pred             CCCccccccccCCCCCCHHHHHHHHHHHhhhhhccCHHHHHHHHHH--------HHHhhhhhh---------------H-
Q psy4798         504 DSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSMILKKE--------FGVANKERE---------------A-  559 (623)
Q Consensus       504 ~~~~~~~~~~~~g~gl~~~Ei~AVLAHELGH~k~~H~~k~~~~~~~--------~g~~~~~~~---------------~-  559 (623)
                               +++   |++||++||+|||+|||++||+.|++++.++        ||++++...               + 
T Consensus       272 ---------~~~---~~~eel~AVl~HELGHW~~~H~~K~~ii~~~~l~l~~llF~~~~~~~~ly~a~Gf~~~~P~~ig~  339 (428)
T KOG2719|consen  272 ---------EEH---LNNEELVAVLAHELGHWKLNHVLKNIIIMQIHLFLEFLLFGFLYRNPKLYAAFGFIDEQPSLIGF  339 (428)
T ss_pred             ---------hhc---cccHHHHHHHHHHhhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHcCcchheeecCCCCCcchhHH
Confidence                     011   7899999999999999999999999998875        455444211               0 


Q ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhhhcccccccccc
Q psy4798         560 ---------SVMRYVTKESELITARQDREAAEKKYKEAMKEKDNVMAKLKVLSTDKARLTQLYD  614 (623)
Q Consensus       560 ---------~v~~~~~~~~~~~~sR~~E~~AD~~a~~~~~~~~~l~~aL~kL~~~~~~~~~l~~  614 (623)
                               +....+....+.. ||+.|++||++|.+.. -.+++.+||.||..  +|++.+.+
T Consensus       340 livf~~~l~py~~l~~~~~n~~-sR~fEyqAD~fA~klG-Yg~~L~~AL~KL~~--dnlsf~~~  399 (428)
T KOG2719|consen  340 LIVFQFVLAPYRALLNFLMNLI-SRRFEYQADAFAKKLG-YGKDLRQALIKLFV--DNLSFPVS  399 (428)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHcC-CchhHHHHHHHHhh--hhcCCCCC
Confidence                     1111122233444 9999999999999986 67789999999998  44444433

>KOG2719|consensus Back     alignment and domain information
>PRK03001 M48 family peptidase; Provisional Back     alignment and domain information
>PRK03982 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK01265 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK01265 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK01345 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK04897 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK02391 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK03982 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK02391 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK03072 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK04897 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK02870 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK03072 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK03001 M48 family peptidase; Provisional Back     alignment and domain information
>PRK05457 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK02870 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK05457 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK01345 heat shock protein HtpX; Provisional Back     alignment and domain information
>PF01435 Peptidase_M48: Peptidase family M48 This is family M48 in the peptidase classification Back     alignment and domain information
>COG0501 HtpX Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0501 HtpX Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF01435 Peptidase_M48: Peptidase family M48 This is family M48 in the peptidase classification Back     alignment and domain information
>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] Back     alignment and domain information
>PF05569 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR008756 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF05569 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR008756 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2661|consensus Back     alignment and domain information
>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] Back     alignment and domain information
>COG4784 Putative Zn-dependent protease [General function prediction only] Back     alignment and domain information
>COG4219 MecR1 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>COG4784 Putative Zn-dependent protease [General function prediction only] Back     alignment and domain information
>KOG2661|consensus Back     alignment and domain information
>COG4219 MecR1 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>PF06114 DUF955: Domain of unknown function (DUF955); InterPro: IPR010359 This is a family of bacterial and viral proteins with undetermined function Back     alignment and domain information
>PF04228 Zn_peptidase: Putative neutral zinc metallopeptidase; InterPro: IPR007343 Members of this family of bacterial proteins are described as hypothetical proteins or zinc metallopeptidases Back     alignment and domain information
>PF06114 DUF955: Domain of unknown function (DUF955); InterPro: IPR010359 This is a family of bacterial and viral proteins with undetermined function Back     alignment and domain information
>PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori Back     alignment and domain information
>PRK04351 hypothetical protein; Provisional Back     alignment and domain information
>COG1451 Predicted metal-dependent hydrolase [General function prediction only] Back     alignment and domain information
>PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori Back     alignment and domain information
>PF13699 DUF4157: Domain of unknown function (DUF4157) Back     alignment and domain information
>PF04298 Zn_peptidase_2: Putative neutral zinc metallopeptidase; InterPro: IPR007395 Members of this family of bacterial proteins are described as hypothetical proteins or zinc-dependent proteases Back     alignment and domain information
>COG1451 Predicted metal-dependent hydrolase [General function prediction only] Back     alignment and domain information
>PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function Back     alignment and domain information
>PF10463 Peptidase_U49: Peptidase U49; InterPro: IPR019504 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>smart00731 SprT SprT homologues Back     alignment and domain information
>PF10263 SprT-like: SprT-like family; InterPro: IPR006640 This is a family of uncharacterised bacterial proteins which includes Escherichia coli SprT (P39902 from SWISSPROT) Back     alignment and domain information
>PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] Back     alignment and domain information
>PF04228 Zn_peptidase: Putative neutral zinc metallopeptidase; InterPro: IPR007343 Members of this family of bacterial proteins are described as hypothetical proteins or zinc metallopeptidases Back     alignment and domain information
>PF04298 Zn_peptidase_2: Putative neutral zinc metallopeptidase; InterPro: IPR007395 Members of this family of bacterial proteins are described as hypothetical proteins or zinc-dependent proteases Back     alignment and domain information
>PF13203 DUF2201_N: Putative metallopeptidase domain Back     alignment and domain information
>PF08325 WLM: WLM domain; InterPro: IPR013536 The WLM (WSS1-like metalloprotease) domain is a globular domain related to the zincin-like superfamily of Zn-dependent peptidase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query623
4aw6_A482 Crystal Structure Of The Human Nuclear Membrane Zin 2e-70
2ypt_A482 Crystal Structure Of The Human Nuclear Membrane Zin 1e-69
4il3_A461 Crystal Structure Of S. Mikatae Ste24p Length = 461 2e-39
>pdb|4AW6|A Chain A, Crystal Structure Of The Human Nuclear Membrane Zinc Metalloprotease Zmpste24 (Face1) Length = 482 Back     alignment and structure 
Iteration: 1

 Score =  263 bits (672), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/331 (42%), Positives = 200/331 (60%), Gaps = 53/331 (16%)
Query: 238 GKSLGKAIFLRKALLKINKDNLGFPA----------LLVCNGLPYFWSKSEELGETYFGF 287
           G+ +    F +  L +++K    F +          +L+  G+PY W  S      Y GF
Sbjct: 56  GQIMDSETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGIPYLWRLSGRFC-GYAGF 114
Query: 288 HKN-EIVTSCLFIVLFNIFSTVIGLPISFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVS 346
               EI  S +F++L  +FS + GLP S Y+ FV+EEKHGFN+QT GF            
Sbjct: 115 GPEYEITQSLVFLLLATLFSALAGLPWSLYNTFVIEEKHGFNQQTLGF------------ 162
Query: 347 LILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWV 406
                               F+KD IK F+V+  + +P++  ++YII++GG+  F+Y W+
Sbjct: 163 --------------------FMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWL 202
Query: 407 FIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSE 466
           F +++SL L+TIY ++IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS 
Sbjct: 203 FTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSS 262
Query: 467 HSNAYFYGFFKNKRIVLFDTLLKDYVPLNAD---------KKDKAGDSEPLISTEGANKK 517
           HSNAYFYGFFKNKRIVLFDTLL++Y  LN D         + ++ G+SE + +     K+
Sbjct: 263 HSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQ 322
Query: 518 GCDTEEVLAVLAHELGHWKYNHVLKSMILKK 548
           GC  EEVLAVL HELGHWK  H +K++I+ +
Sbjct: 323 GCKNEEVLAVLGHELGHWKLGHTVKNIIISQ 353
>pdb|2YPT|A Chain A, Crystal Structure Of The Human Nuclear Membrane Zinc Metalloprotease Zmpste24 Mutant (E336a) In Complex With A Synthetic Csim Tetrapeptide From The C-Terminus Of Prelamin A Length = 482 Back     alignment and structure
>pdb|4IL3|A Chain A, Crystal Structure Of S. Mikatae Ste24p Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query623
4aw6_A482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 7e-45
4aw6_A482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 2e-37
4aw6_A482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 7e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} Length = 482 Back     alignment and structure
 Score =  165 bits (419), Expect = 7e-45
 Identities = 140/362 (38%), Positives = 202/362 (55%), Gaps = 54/362 (14%)

Query: 204 LIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGKAIFLRKALLKINKDNLGF-- 261
           L     Y++  +    Q  +    +         G+ +    F +  L +++K    F  
Sbjct: 25  LFSWTVYLWETFLAQRQRRIY---KTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWS 81

Query: 262 --------PALLVCNGLPYFWSKSEELGETYFGFHKNEIVTSCLFIVLFNIFSTVIGLPI 313
                     +L+  G+PY W  S           + EI  S +F++L  +FS + GLP 
Sbjct: 82  GLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPW 141

Query: 314 SFYHHFVLEEKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIK 373
           S Y+ FV+EEKHGFN+QT GFF+KD IK F+V+  + +P++  ++YII+  G        
Sbjct: 142 SLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGG-------- 193

Query: 374 SFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPL 433
                                   +  F+Y W+F +++SL L+TIY ++IAPLFDK+TPL
Sbjct: 194 ------------------------DYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPL 229

Query: 434 PDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVP 493
           P+G+LK  IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKRIVLFDTLL++Y  
Sbjct: 230 PEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEEYSV 289

Query: 494 LNADKKDKA---------GDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSM 544
           LN D ++ +         G+SE + +     K+GC  EEVLAVL HELGHWK  H +K++
Sbjct: 290 LNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNI 349

Query: 545 IL 546
           I+
Sbjct: 350 II 351
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} Length = 482 Back     alignment and structure
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} Length = 482 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query623
4aw6_A482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 100.0
4aw6_A482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 100.0
3c37_A253 Peptidase, M48 family; Q74D82, GSR143A, structural 99.87
3c37_A253 Peptidase, M48 family; Q74D82, GSR143A, structural 99.7
3cqb_A107 Probable protease HTPX homolog; heat shock protein 99.61
3cqb_A107 Probable protease HTPX homolog; heat shock protein 99.53
3dte_A 301 IRRE protein; radiotolerance, gene regulation, met 95.95
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A Back     alignment and structure
Probab=100.00  E-value=5.4e-71  Score=606.19  Aligned_cols=403  Identities=43%  Similarity=0.765  Sum_probs=312.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCcchHHHHhhhhhcCCCCccccccccchhhhHHHHHHhHhhcccC
Q psy4798           4 TLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTVSS   83 (623)
Q Consensus         4 ~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~l~~~~g~~~~~ly~~d~~~~~~~~~~v~~v~~~~~s   83 (623)
                      .-+..|++.++++.|+.|+|+.||++||.|..+.+..+|++++...+++.+.+++.|.++|..+++++.+++.+      
T Consensus        14 ~~~~~~~~~il~~~~~~~~~e~yL~~RQ~~~~~~~~~vP~~l~~~~~~e~f~ka~~Y~~~k~~f~~~~~~~~~i------   87 (482)
T 4aw6_A           14 PAEKRIFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSET------   87 (482)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence            34678999999999999999999999999987655679999999999999999999998876665444222110      


Q ss_pred             CCCCCCceeeecCCCCeEEEEecchhhhccCCccccCCCCCCCCcccccccccCCCCChHHHHHHHHHhhhhhhcchHHH
Q psy4798          84 KRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLK  163 (623)
Q Consensus        84 ~~~~~~NA~~~G~~~~krIvl~d~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~El~AVlAHELGH~k~~h~~k  163 (623)
                                                                                                      
T Consensus        88 --------------------------------------------------------------------------------   87 (482)
T 4aw6_A           88 --------------------------------------------------------------------------------   87 (482)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhcCC
Q psy4798         164 SMIVMQLNLLFMLYSFQYLFQYPPLYSAFGFYDSQPILLGLIIVLQYVFAPYNQLVQFLMTCMTRRFEFQADAFGKSLGK  243 (623)
Q Consensus       164 ~~~~~~~~~~~~~~lf~~~~~~~~l~~~~G~~~~~p~~i~l~~~~~~i~~p~~~l~~~l~~~~sR~~Ey~AD~fA~~l~~  243 (623)
                                                                      ..-                             
T Consensus        88 ------------------------------------------------~~~-----------------------------   90 (482)
T 4aw6_A           88 ------------------------------------------------EGT-----------------------------   90 (482)
T ss_dssp             ------------------------------------------------HHH-----------------------------
T ss_pred             ------------------------------------------------HHH-----------------------------
Confidence                                                            000                             


Q ss_pred             HHHHHHHHHHHhhCcCCCchhhccchhhhhHHhhhhhhhhccCCc-cchHHHHHHHHHHHHHHHHhhhccHHHhhhcccc
Q psy4798         244 AIFLRKALLKINKDNLGFPALLVCNGLPYFWSKSEELGETYFGFH-KNEIVTSCLFIVLFNIFSTVIGLPISFYHHFVLE  322 (623)
Q Consensus       244 ~~~L~sAL~KLa~~~ls~P~iL~~g~~~~lw~~s~~~~~~~~~~~-~~~~~~~~~f~~~~~l~~~li~lP~~~Y~~f~le  322 (623)
                                         ..++++++|++|++++.+.. ..++. .++++++++|+++++++++++++||++|++|++|
T Consensus        91 -------------------~~l~~g~~~~lw~~~~~~~~-~~~~~~~~~i~~s~~f~~~~~l~~~l~~LP~~~Y~tfvle  150 (482)
T 4aw6_A           91 -------------------LILLFGGIPYLWRLSGRFCG-YAGFGPEYEITQSLVFLLLATLFSALAGLPWSLYNTFVIE  150 (482)
T ss_dssp             -------------------HHHHHTHHHHHHHHTCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred             -------------------HHHHHhhHHHHHHHHHHHHH-HhcccccchhHHHHHHHHHHHHHHHHHHhHHHHHHheeeh
Confidence                               03456789999998887654 22222 5799999999999999999999999999999999


Q ss_pred             cccCCCcccHHHHHHHHHHHHHHHHhhccccccchhhhhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHcchhHHH
Q psy4798         323 EKHGFNKQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFL  402 (623)
Q Consensus       323 ~~~Gfn~~T~~~f~~d~vk~~~l~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~pl~~~~~~li~~~g~~~~l  402 (623)
                      +||||||||++.|++|++|++++++                                +++.|++++++|+++++|++||+
T Consensus       151 ~~~Gfnk~t~~~f~~D~~k~~~l~~--------------------------------vi~~pl~~~~~~ii~~~g~~~wl  198 (482)
T 4aw6_A          151 EKHGFNQQTLGFFMKDAIKKFVVTQ--------------------------------CILLPVSSLLLYIIKIGGDYFFI  198 (482)
T ss_dssp             HHTTCBCCCHHHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHHHSCSSHHH
T ss_pred             hhcCCCCCCHHHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHHHcCchhHH
Confidence            9999999999999999999999999                                89999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhchHhhhhhhccCCcCCchhHHHHHHHHHHHcCCCCCeEEEEeCCCCCCcccEEEeccCCCceEE
Q psy4798         403 YLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV  482 (623)
Q Consensus       403 ~~w~~~~~~~l~~~~i~P~~I~plf~k~~pl~~~~L~~~I~~la~~~gfp~~~v~vv~~s~rs~~~NAy~~G~~~~krIV  482 (623)
                      |+|++.++++++++++||.+|+|+|||++|++||+|+++|+++|+++|||+++|||+|+||||+|+|||++|++++||||
T Consensus       199 ~~w~~~~~~~l~~~~iyP~~I~PLfnk~~Pl~dg~L~~~Ie~la~~~~fp~~~v~vv~gSkRs~~~NAy~~G~~~~krIV  278 (482)
T 4aw6_A          199 YAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIV  278 (482)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHSCEEECCSSHHHHHHHHHHHHTTCCEEEEEEECGGGTBSCCCEEEEESSSCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCceEEEcCCCCcEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EehhHHhhccCCCcccc-------CCCCCCCcc--ccccccCCCCCCHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHh
Q psy4798         483 LFDTLLKDYVPLNADKK-------DKAGDSEPL--ISTEGANKKGCDTEEVLAVLAHELGHWKYNHVLKSMILKKEFGVA  553 (623)
Q Consensus       483 L~dtLl~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~g~gl~~~Ei~AVLAHELGH~k~~H~~k~~~~~~~~g~~  553 (623)
                      ++|||++++.+.+.+..       +++|+++.+  +.+++++|+||++||++||+|||+|||+++|+.++++++.+.+++
T Consensus       279 l~dtLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~El~aVlaHElgH~~~~~~~~~~~~~~i~~~~  358 (482)
T 4aw6_A          279 LFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFL  358 (482)
T ss_dssp             EEHHHHC------------------------------------CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred             EEchHHHhcccccccccccccccccccccccchhhcccchhhccCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence            99999987533222211       122322222  337788999999999999999999999999999999877642211


Q ss_pred             hhh--------------h------h---HH--HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy4798         554 NKE--------------R------E---AS--VMR-------YVTKESELITARQDREAAEKKYKEAMKEKDNVMAKLKV  601 (623)
Q Consensus       554 ~~~--------------~------~---~~--v~~-------~~~~~~~~~~sR~~E~~AD~~a~~~~~~~~~l~~aL~k  601 (623)
                      ...              .      .   +.  +..       .+.......+||++|++||++|++. ++|++++++|+|
T Consensus       359 ~~~l~~~l~~~~~l~~~~G~~~~~p~~~~~llv~~~i~~P~~~l~~~i~~~~SR~~E~eAD~~a~~l-g~p~~L~~AL~K  437 (482)
T 4aw6_A          359 CFFLFAVLIGRKELFAAFGFYDSQPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKKL-GKAKDLYSALIK  437 (482)
T ss_dssp             HHHHHHHHTTCSHHHHHTTCCSCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTHHHHHHHHHH
T ss_pred             HHHHHHHHHcchhhHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHc-CCHHHHHHHHHH
Confidence            100              0      0   00  010       1122233445999999999999998 589999999999


Q ss_pred             hhhccccc--------cccccCccccccc
Q psy4798         602 LSTDKARL--------TQLYDDKVRMYNV  622 (623)
Q Consensus       602 L~~~~~~~--------~~l~~~~~~e~~~  622 (623)
                      |+.+....        .-.++||..+-||
T Consensus       438 L~~~n~s~~~~~~~~~~~~sTHP~~~eRI  466 (482)
T 4aw6_A          438 LNKDNLGFPVSDWLFSMWHYSHPPLLERL  466 (482)
T ss_dssp             HHHHTTCCSCCCHHHHHHSCSSCCHHHHH
T ss_pred             HHHhcccCCCCChHHHHHhcCCcCHHHHH
Confidence            99754211        1234677665543
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A Back     alignment and structure
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca} Back     alignment and structure
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca} Back     alignment and structure
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00