Psyllid ID: psy4825

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
Protein Sequence
MTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKISTENRK
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHcccccccccHHHHHHcccEEEEEcccccccccccccccccccccEEEEEccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHcccHHHHHHHHHHHHHHHcccccHHHccHHHHHHccccEEEEEcccccccEEEccccccccEEEEEEEccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mteniqgegidLHLLGLRQTALehnipcelfqdEAYKLSNyfklstsqvacksdsfmgygpvvpdgygcsynpreATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVesrkistenrk
Flexible Loop (DISEMBL)
mteniqgegidLHLLGLRQTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLsaignlvesrkistenrk
Low Complexity Region (SEG)
MTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKISTENRK
Disordered region (IsUnstruct)
********GIDLHLLGLRQTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLD*********************
Disordered Region (DISOPRED)
MTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGN*************
Disordered Region (DISEMBL)
MTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES*********
Disordered Region (DISPRO)
MTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKISTENRK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	122	2.2.26 [Sep-21-2011]
P07668	721	Choline O-acetyltransfera	yes	N/A	0.926	0.156	0.578	3e-31
P52826	627	Carnitine O-acetyltransfe	N/A	N/A	0.885	0.172	0.513	1e-23
P28329	748	Choline O-acetyltransfera	no	N/A	0.950	0.155	0.464	2e-23
Q90YJ9	640	Choline O-acetyltransfera	no	N/A	0.860	0.164	0.518	4e-23
Q704S8	626	Carnitine O-acetyltransfe	yes	N/A	0.893	0.174	0.472	5e-23
P47934	626	Carnitine O-acetyltransfe	yes	N/A	0.893	0.174	0.472	1e-22
P43155	626	Carnitine O-acetyltransfe	no	N/A	0.893	0.174	0.472	1e-22
P13222	641	Choline O-acetyltransfera	yes	N/A	0.860	0.163	0.5	2e-22
Q03059	641	Choline O-acetyltransfera	no	N/A	0.909	0.173	0.473	2e-21
P32738	640	Choline O-acetyltransfera	no	N/A	0.909	0.173	0.473	4e-21

>sp|P07668|CLAT_DROME Choline O-acetyltransferase OS=Drosophila melanogaster GN=Cha PE=1 SV=3

 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 84/114 (73%), Gaps = 1/114 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
           M +NI G GID+ LLGLR+ ++E      ELF+DE+Y +S  F LSTSQVAC +DSFMGY
Sbjct: 608 MVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQCFLLSTSQVACSTDSFMGY 667

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           GPV P GYGCSYNP    IVFCVSAF SC  TSA+++A SL +SL  + +L+++
Sbjct: 668 GPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQN 721

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 6

>sp|P52826|CACP_COLLI Carnitine O-acetyltransferase OS=Columba livia GN=CRAT PE=1 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 75/111 (67%), Gaps = 3/111 (2%)

Query: 5   IQGEGIDLHLLGLRQTALEH--NIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPV 62
           IQG  ID HLLGL+  A+E   +IP ELF D AY ++ +F LSTSQV  K+D  M +GPV
Sbjct: 512 IQGNAIDRHLLGLKLQAIEDLVSIP-ELFMDTAYAVAMHFNLSTSQVPAKTDCVMCFGPV 570

Query: 63  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           VPDGYG  YNP    I F +SAF SC  T+AA+ A  L+++L  + +L++S
Sbjct: 571 VPDGYGICYNPMGEHINFAISAFNSCADTNAARMAHYLEKALLDMRSLLQS 621

Carnitine acetylase is specific for short chain fatty acids. Carnitine acetylase seems to affect the flux through the pyruvate dehydrogenase complex. It may be involved as well in the transport of acetyl-CoA out of the mitochondria for fatty acid biosynthesis or urinary excretion.

Columba livia (taxid: 8932)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

>sp|P28329|CLAT_HUMAN Choline O-acetyltransferase OS=Homo sapiens GN=CHAT PE=1 SV=4

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 82/125 (65%), Gaps = 9/125 (7%)

Query: 5   IQGEGIDLHLLGLRQ--TALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPV 62
           I G  ID HLL LR+   A+   +P E+F DE Y +SN F LSTSQV   ++ F  YGPV
Sbjct: 615 ITGMAIDNHLLALRELARAMCKELP-EMFMDETYLMSNRFVLSTSQVPTTTEMFCCYGPV 673

Query: 63  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNL------VESRKI 116
           VP+GYG  YNP+  TI+FC+S+F SC  TS++KFA +++ESL  + +L       ES+ +
Sbjct: 674 VPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLPPTESKPL 733

Query: 117 STENR 121
           +T+ +
Sbjct: 734 ATKEK 738

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

>sp|Q90YJ9|CLAT_CHICK Choline O-acetyltransferase OS=Gallus gallus GN=CHAT PE=2 SV=1

 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 56/108 (51%), Positives = 70/108 (64%), Gaps = 3/108 (2%)

Query: 5   IQGEGIDLHLLGLRQTALEH--NIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPV 62
           I G  ID HLLGLR+ A EH   +P E+F DE Y  SN F LSTSQV    + F  YGPV
Sbjct: 507 ITGMAIDNHLLGLREVAREHFKELP-EIFTDETYLTSNRFILSTSQVPTPMEMFCCYGPV 565

Query: 63  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNL 110
           VP+GYG  YNP+   I+FC+S+FK C  TS+   A +++ESL  I +L
Sbjct: 566 VPNGYGACYNPQPEHILFCISSFKDCKETSSDMLAKAVEESLLEIRDL 613

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

>sp|Q704S8|CACP_RAT Carnitine O-acetyltransferase OS=Rattus norvegicus GN=Crat PE=1 SV=1

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)

Query: 5   IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +GPVV
Sbjct: 511 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMSFGPVV 570

Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           PDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++
Sbjct: 571 PDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQN 620

Carnitine acetylase is specific for short chain fatty acids. Carnitine acetylase seems to affect the flux through the pyruvate dehydrogenase complex. It may be involved as well in the transport of acetyl-CoA into mitochondria.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

>sp|P47934|CACP_MOUSE Carnitine O-acetyltransferase OS=Mus musculus GN=Crat PE=1 SV=3

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)

Query: 5   IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +GPVV
Sbjct: 511 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVV 570

Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           PDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++
Sbjct: 571 PDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQN 620

Carnitine acetylase is specific for short chain fatty acids. Carnitine acetylase seems to affect the flux through the pyruvate dehydrogenase complex. It may be involved as well in the transport of acetyl-CoA into mitochondria.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

>sp|P43155|CACP_HUMAN Carnitine O-acetyltransferase OS=Homo sapiens GN=CRAT PE=1 SV=5

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)

Query: 5   IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +GPVV
Sbjct: 511 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFHLSTSQVPAKTDCVMFFGPVV 570

Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           PDGYG  YNP EA I F +SA+ SC  T+AA+ A  L+++L  +  L++S
Sbjct: 571 PDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQS 620

Carnitine acetylase is specific for short chain fatty acids. Carnitine acetylase seems to affect the flux through the pyruvate dehydrogenase complex. It may be involved as well in the transport of acetyl-CoA into mitochondria.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

>sp|P13222|CLAT_PIG Choline O-acetyltransferase OS=Sus scrofa GN=CHAT PE=1 SV=3

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 3/108 (2%)

Query: 5   IQGEGIDLHLLGLRQTALE--HNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPV 62
           I G  ID HLLGLR+ A E    +P E+F DE Y +SN F LSTSQV    + F  YGPV
Sbjct: 508 ITGMAIDNHLLGLRELAREVCKELP-EMFTDETYLMSNRFVLSTSQVPTTMEMFCCYGPV 566

Query: 63  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNL 110
           VP+GYG  YNP+  +I+FC+S+F  C  TS+ KFA +++ES   +  L
Sbjct: 567 VPNGYGACYNPQPESILFCISSFHGCKETSSTKFAKAVEESFIEMKGL 614

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

>sp|Q03059|CLAT_MOUSE Choline O-acetyltransferase OS=Mus musculus GN=Chat PE=2 SV=2

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 68/112 (60%), Gaps = 1/112 (0%)

Query: 5   IQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I G  ID HLL LR+ A +    P E+F DE Y +SN F LSTSQV    + F  YGPVV
Sbjct: 508 ITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFILSTSQVPTTMEMFCCYGPVV 567

Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 115
           P+GYG  YNP    I FC+S+F  C  TS+ +FA ++  SL  + +L  SR+
Sbjct: 568 PNGYGACYNPHAEAITFCISSFHGCKETSSVEFAEAVGASLVDMRDLCSSRQ 619

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

>sp|P32738|CLAT_RAT Choline O-acetyltransferase OS=Rattus norvegicus GN=Chat PE=1 SV=2

 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 69/112 (61%), Gaps = 1/112 (0%)

Query: 5   IQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I G  ID HLL LR+ A +    P E+F DE Y +SN F LSTSQV    + F  YGPVV
Sbjct: 507 ITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVV 566

Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 115
           P+G G  YNP+   I FC+S+F SC  TS+ +FA ++  SL  + +L  SR+
Sbjct: 567 PNGNGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSSRQ 618

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	122
242023368	650	Choline O-acetyltransferase, putative [P	0.950	0.178	0.581	2e-33
328723269	777	PREDICTED: choline O-acetyltransferase-l	0.942	0.148	0.521	7e-31
195343218	770	GM17887 [Drosophila sechellia] gi|194133	0.893	0.141	0.576	2e-30
390177768	722	GA11570 [Drosophila pseudoobscura pseudo	0.926	0.156	0.587	3e-30
195450925	723	GK13739 [Drosophila willistoni] gi|19416	0.926	0.156	0.587	3e-30
194742317	832	GF17123 [Drosophila ananassae] gi|190626	0.893	0.131	0.576	3e-30
195497744	721	GE25557 [Drosophila yakuba] gi|194182330	0.926	0.156	0.578	4e-30
91077002	702	PREDICTED: similar to choline o-acyltran	0.901	0.156	0.572	5e-30
194900128	798	GG23058 [Drosophila erecta] gi|190651312	0.926	0.141	0.578	6e-30
195053932	749	GH18641 [Drosophila grimshawi] gi|193895	0.926	0.150	0.578	6e-30

>gi|242023368|ref|XP_002432106.1| Choline O-acetyltransferase, putative [Pediculus humanus corporis] gi|212517480|gb|EEB19368.1| Choline O-acetyltransferase, putative [Pediculus humanus corporis]

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/117 (58%), Positives = 88/117 (75%), Gaps = 1/117 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALE-HNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
           M +NI G+GID+HLLG+R+ ALE      E+F DE Y ++N+F LSTSQ+A K + FMGY
Sbjct: 531 MLDNILGKGIDIHLLGIREMALESMGTKPEMFDDETYAIANHFGLSTSQLATKLNMFMGY 590

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKI 116
           GPVVPDGYG SYNPR   I+FC+SAF SC  TSA +FA SL++SL ++  L+ SR+I
Sbjct: 591 GPVVPDGYGASYNPRNDQIIFCISAFHSCAKTSAWRFARSLEQSLDSMQKLMNSREI 647

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723269|ref|XP_001946601.2| PREDICTED: choline O-acetyltransferase-like [Acyrthosiphon pisum]

 Score =  137 bits (346), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 60/115 (52%), Positives = 86/115 (74%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYG 60
           M +NI G GID HLLGLRQ A E+ I C +F+D++++++N+F LSTSQ+   +DSFMGYG
Sbjct: 662 MIDNILGMGIDSHLLGLRQAARENAISCPVFEDDSFRIANHFSLSTSQLLTSTDSFMGYG 721

Query: 61  PVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 115
           PVVPDGYG SYNP+  ++VFCVS+FKS  TT+   F  +L++SL  +  ++  ++
Sbjct: 722 PVVPDGYGVSYNPQSNSLVFCVSSFKSSKTTNNNAFTVALEQSLMTMQKMIYMKR 776

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195343218|ref|XP_002038195.1| GM17887 [Drosophila sechellia] gi|194133045|gb|EDW54613.1| GM17887 [Drosophila sechellia]

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 85/118 (72%), Gaps = 9/118 (7%)

Query: 1   MTENIQGEGIDLHLLGLRQTALE-----HNIPCELFQDEAYKLSNYFKLSTSQVACKSDS 55
           M +NI G GID+ LLGLR+ ++E     H    ELF+DE+Y +S  F LSTSQVAC +DS
Sbjct: 657 MVKNILGNGIDIPLLGLREASIEVTGEMH----ELFKDESYNISQCFLLSTSQVACSTDS 712

Query: 56  FMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           FMGYGPV P GYGCSYNP    IVFCVSAF SC  TSA+++A SL +SL  + NL+++
Sbjct: 713 FMGYGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRNLLQN 770

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390177768|ref|XP_001358450.3| GA11570 [Drosophila pseudoobscura pseudoobscura] gi|388859188|gb|EAL27589.3| GA11570 [Drosophila pseudoobscura pseudoobscura]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/114 (58%), Positives = 85/114 (74%), Gaps = 1/114 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
           M +NI G GID+ LLGLR+ ++E      ELF DE+YK+S  F LSTSQVAC +DSFMGY
Sbjct: 609 MVKNILGSGIDIPLLGLREASVEVTGELHELFTDESYKISQCFLLSTSQVACSTDSFMGY 668

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           GPV P GYGCSYNP+   IVFCVSAF SC  TSA+++A SL +SL  + +L+++
Sbjct: 669 GPVTPRGYGCSYNPQPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQN 722

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195450925|ref|XP_002072692.1| GK13739 [Drosophila willistoni] gi|194168777|gb|EDW83678.1| GK13739 [Drosophila willistoni]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/114 (58%), Positives = 84/114 (73%), Gaps = 1/114 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
           M +NI G GID+ LLGLR+ +LE N    ELF DE YK+S  F LSTSQVAC ++SFMGY
Sbjct: 610 MVKNILGNGIDIPLLGLREASLEVNGEMHELFTDETYKISQCFLLSTSQVACTTNSFMGY 669

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           GPV P GYGCSYNP+   I+FCVSAF +C  TSA++FA SL  SL  + +L+++
Sbjct: 670 GPVTPRGYGCSYNPQPERIIFCVSAFYNCEDTSASRFAKSLQNSLDIMRDLLQN 723

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194742317|ref|XP_001953649.1| GF17123 [Drosophila ananassae] gi|190626686|gb|EDV42210.1| GF17123 [Drosophila ananassae]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 86/118 (72%), Gaps = 9/118 (7%)

Query: 1   MTENIQGEGIDLHLLGLRQTALE-----HNIPCELFQDEAYKLSNYFKLSTSQVACKSDS 55
           M +NI G GID+ LLGLR+ ++E     H    ELF DE+YK+S  F LSTSQVAC +DS
Sbjct: 719 MVKNILGSGIDIPLLGLREASVEVTGEMH----ELFTDESYKISQCFLLSTSQVACSTDS 774

Query: 56  FMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           FMGYGPV P GYGCSYNP+   IVFCVSAF SC  TSA+++A SL +SL  + +L+++
Sbjct: 775 FMGYGPVTPRGYGCSYNPQPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQN 832

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195497744|ref|XP_002096229.1| GE25557 [Drosophila yakuba] gi|194182330|gb|EDW95941.1| GE25557 [Drosophila yakuba]

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 85/114 (74%), Gaps = 1/114 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
           M +NI G GID+ LLGLR+ ++E      ELF+DE+Y +S  F LSTSQVAC +DSFMGY
Sbjct: 608 MVKNILGNGIDIPLLGLREASIEVTGEMHELFRDESYNISQCFLLSTSQVACSTDSFMGY 667

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           GPV P GYGCSYNP+   IVFCVSAF SC  TSA+++A SL +SL  + +L+++
Sbjct: 668 GPVTPRGYGCSYNPQPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQN 721

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91077002|ref|XP_975503.1| PREDICTED: similar to choline o-acyltransferase [Tribolium castaneum] gi|270002009|gb|EEZ98456.1| hypothetical protein TcasGA2_TC000946 [Tribolium castaneum]

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/117 (57%), Positives = 84/117 (71%), Gaps = 7/117 (5%)

Query: 1   MTENIQGEGIDLHLLGLRQTALE------HNIPCELFQDEAYKLSNYFKLSTSQVACKSD 54
           M +NI G+GID+HLLGLR+ A E      H +P ++F D  YKL+N F LSTSQVA  +D
Sbjct: 582 MVDNILGQGIDIHLLGLREAARETSPTAAHPLP-DIFTDYTYKLANKFLLSTSQVATSTD 640

Query: 55  SFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLV 111
           SFMGYGPV PDGYG SYNP+   I+FC+SAF S   TS ++FA SLDESL+ +  L+
Sbjct: 641 SFMGYGPVEPDGYGASYNPKPDHIIFCLSAFWSSEVTSTSRFAQSLDESLNLMQALL 697

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194900128|ref|XP_001979609.1| GG23058 [Drosophila erecta] gi|190651312|gb|EDV48567.1| GG23058 [Drosophila erecta]

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 84/114 (73%), Gaps = 1/114 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
           M +NI G GID+ LLGLR+ ++E      ELF+DE+Y +S  F LSTSQVAC +DSFMGY
Sbjct: 685 MVKNILGNGIDIPLLGLREASIEVTGEMHELFRDESYNISQCFLLSTSQVACSTDSFMGY 744

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           GPV P GYGCSYNP    IVFCVSAF SC  TSA+++A SL +SL  + +L+++
Sbjct: 745 GPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQN 798

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195053932|ref|XP_001993880.1| GH18641 [Drosophila grimshawi] gi|193895750|gb|EDV94616.1| GH18641 [Drosophila grimshawi]

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 85/114 (74%), Gaps = 1/114 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
           M +NI G GID+ LLGLR+ ++E      ELF DE+YK+S  F LSTSQVAC +DSFMGY
Sbjct: 636 MVKNILGSGIDIPLLGLREASVEVTGELHELFTDESYKISQCFLLSTSQVACSTDSFMGY 695

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           GPV P GYGCSYNP+   IVFCVSAF +C  TSA+++A SL +SL  + +L+++
Sbjct: 696 GPVTPRGYGCSYNPQPEQIVFCVSAFYACEDTSASRYAKSLQDSLDIMHDLLQN 749

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	122
FB|FBgn0000303	721	Cha "Choline acetyltransferase	0.926	0.156	0.578	5.1e-29
FB|FBgn0037440	662	CG1041 [Drosophila melanogaste	0.959	0.176	0.440	1e-23
UNIPROTKB|F1P393	640	CHAT "Choline O-acetyltransfer	0.926	0.176	0.5	6.6e-22
UNIPROTKB|Q90YJ9	640	CHAT "Choline O-acetyltransfer	0.926	0.176	0.5	6.6e-22
UNIPROTKB|P28329	748	CHAT "Choline O-acetyltransfer	0.950	0.155	0.464	7.1e-22
UNIPROTKB|F1MLQ5	637	CHAT "Uncharacterized protein"	0.811	0.155	0.529	8.4e-22
RGD|1303031	626	Crat "carnitine O-acetyltransf	0.893	0.174	0.472	2.8e-21
UNIPROTKB|P13222	641	CHAT "Choline O-acetyltransfer	0.803	0.152	0.524	2.9e-21
FB|FBgn0038486	643	CG5265 [Drosophila melanogaste	0.877	0.166	0.453	3e-21
MGI|MGI:109501	626	Crat "carnitine acetyltransfer	0.893	0.174	0.472	5.9e-21

FB|FBgn0000303 Cha "Choline acetyltransferase" [Drosophila melanogaster (taxid:7227)]

 Score = 331 (121.6 bits), Expect = 5.1e-29, P = 5.1e-29
 Identities = 66/114 (57%), Positives = 84/114 (73%)

Query:     1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
             M +NI G GID+ LLGLR+ ++E      ELF+DE+Y +S  F LSTSQVAC +DSFMGY
Sbjct:   608 MVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQCFLLSTSQVACSTDSFMGY 667

Query:    60 GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
             GPV P GYGCSYNP    IVFCVSAF SC  TSA+++A SL +SL  + +L+++
Sbjct:   668 GPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQN 721

GO:0004102 "choline O-acetyltransferase activity" evidence=ISS;IDA

GO:0008292 "acetylcholine biosynthetic process" evidence=NAS

GO:0007274 "neuromuscular synaptic transmission" evidence=IMP

FB|FBgn0037440 CG1041 [Drosophila melanogaster (taxid:7227)]

 Score = 281 (104.0 bits), Expect = 1.0e-23, P = 1.0e-23
 Identities = 52/118 (44%), Positives = 78/118 (66%)

Query:     5 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
             +QG+G+D HLLGL+  ALEH+ P  E F+   +  S++F++STSQVA K D+FMGYGP  
Sbjct:   544 LQGKGVDRHLLGLKLMALEHSKPIPEFFKSPGFVKSSHFRMSTSQVATKYDAFMGYGPAT 603

Query:    64 PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKISTENR 121
              DGY C YNPR+  I+  +SA++ C  T   KF  +L++S   + N++E     T+++
Sbjct:   604 DDGYACCYNPRDNDIILAISAWRHCPITDHLKFVKTLEQSFFEMKNVLEKNPPETKSK 661

GO:0005739 "mitochondrion" evidence=ISS

GO:0005777 "peroxisome" evidence=ISS

GO:0004092 "carnitine O-acetyltransferase activity" evidence=ISS

UNIPROTKB|F1P393 CHAT "Choline O-acetyltransferase" [Gallus gallus (taxid:9031)]

 Score = 264 (98.0 bits), Expect = 6.6e-22, P = 6.6e-22
 Identities = 58/116 (50%), Positives = 72/116 (62%)

Query:     5 IQGEGIDLHLLGLRQTALEH--NIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPV 62
             I G  ID HLLGLR+ A EH   +P E+F DE Y  SN F LSTSQV    + F  YGPV
Sbjct:   507 ITGMAIDNHLLGLREVAREHFKELP-EIFTDETYLTSNRFILSTSQVPTTMEMFCCYGPV 565

Query:    63 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKIST 118
             VP+GYG  YNP+   I+FC+S+FK C  TS+   A +++ESL  I +L      ST
Sbjct:   566 VPNGYGACYNPQPEHILFCISSFKDCKETSSDMLAKAVEESLLEIRDLCNKCSSST 621

GO:0004102 "choline O-acetyltransferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0007529 "establishment of synaptic specificity at neuromuscular junction" evidence=IEA

GO:0007622 "rhythmic behavior" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043179 "rhythmic excitation" evidence=IEA

UNIPROTKB|Q90YJ9 CHAT "Choline O-acetyltransferase" [Gallus gallus (taxid:9031)]

 Score = 264 (98.0 bits), Expect = 6.6e-22, P = 6.6e-22
 Identities = 58/116 (50%), Positives = 72/116 (62%)

Query:     5 IQGEGIDLHLLGLRQTALEH--NIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPV 62
             I G  ID HLLGLR+ A EH   +P E+F DE Y  SN F LSTSQV    + F  YGPV
Sbjct:   507 ITGMAIDNHLLGLREVAREHFKELP-EIFTDETYLTSNRFILSTSQVPTPMEMFCCYGPV 565

Query:    63 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKIST 118
             VP+GYG  YNP+   I+FC+S+FK C  TS+   A +++ESL  I +L      ST
Sbjct:   566 VPNGYGACYNPQPEHILFCISSFKDCKETSSDMLAKAVEESLLEIRDLCNKCSSST 621

GO:0004102 "choline O-acetyltransferase activity" evidence=IEA

GO:0042136 "neurotransmitter biosynthetic process" evidence=IEA

UNIPROTKB|P28329 CHAT "Choline O-acetyltransferase" [Homo sapiens (taxid:9606)]

 Score = 265 (98.3 bits), Expect = 7.1e-22, P = 7.1e-22
 Identities = 58/125 (46%), Positives = 82/125 (65%)

Query:     5 IQGEGIDLHLLGLRQTA--LEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPV 62
             I G  ID HLL LR+ A  +   +P E+F DE Y +SN F LSTSQV   ++ F  YGPV
Sbjct:   615 ITGMAIDNHLLALRELARAMCKELP-EMFMDETYLMSNRFVLSTSQVPTTTEMFCCYGPV 673

Query:    63 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNL------VESRKI 116
             VP+GYG  YNP+  TI+FC+S+F SC  TS++KFA +++ESL  + +L       ES+ +
Sbjct:   674 VPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLPPTESKPL 733

Query:   117 STENR 121
             +T+ +
Sbjct:   734 ATKEK 738

GO:0042136 "neurotransmitter biosynthetic process" evidence=IEA

GO:0004102 "choline O-acetyltransferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0007529 "establishment of synaptic specificity at neuromuscular junction" evidence=IEA

GO:0007622 "rhythmic behavior" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043179 "rhythmic excitation" evidence=IEA

GO:0005737 "cytoplasm" evidence=TAS

GO:0005634 "nucleus" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0007269 "neurotransmitter secretion" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046474 "glycerophospholipid biosynthetic process" evidence=TAS

UNIPROTKB|F1MLQ5 CHAT "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 263 (97.6 bits), Expect = 8.4e-22, P = 8.4e-22
 Identities = 54/102 (52%), Positives = 70/102 (68%)

Query:     5 IQGEGIDLHLLGLRQTALE--HNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPV 62
             I G  ID HLLGLR+ A E    +P E+F DE Y +SN F LSTSQV    + F  YGPV
Sbjct:   504 ITGMAIDNHLLGLRELAREMCKELP-EMFTDETYLMSNRFVLSTSQVPTTMEMFCCYGPV 562

Query:    63 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESL 104
             VP+GYG  YNP+  +I+FC+S+F +C  TS+ KFA +++ESL
Sbjct:   563 VPNGYGACYNPQPESILFCISSFHNCKETSSTKFAKAVEESL 604

GO:0043179 "rhythmic excitation" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0007622 "rhythmic behavior" evidence=IEA

GO:0007529 "establishment of synaptic specificity at neuromuscular junction" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004102 "choline O-acetyltransferase activity" evidence=IEA

RGD|1303031 Crat "carnitine O-acetyltransferase" [Rattus norvegicus (taxid:10116)]

 Score = 258 (95.9 bits), Expect = 2.8e-21, P = 2.8e-21
 Identities = 52/110 (47%), Positives = 74/110 (67%)

Query:     5 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
             I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +GPVV
Sbjct:   511 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMSFGPVV 570

Query:    64 PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
             PDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++
Sbjct:   571 PDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQN 620

GO:0004092 "carnitine O-acetyltransferase activity" evidence=ISO;IDA

GO:0005102 "receptor binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;TAS

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005777 "peroxisome" evidence=ISO;TAS

GO:0005783 "endoplasmic reticulum" evidence=TAS

GO:0006631 "fatty acid metabolic process" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0019254 "carnitine metabolic process, CoA-linked" evidence=ISO

UNIPROTKB|P13222 CHAT "Choline O-acetyltransferase" [Sus scrofa (taxid:9823)]

 Score = 258 (95.9 bits), Expect = 2.9e-21, P = 2.9e-21
 Identities = 53/101 (52%), Positives = 68/101 (67%)

Query:     5 IQGEGIDLHLLGLRQTALE--HNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPV 62
             I G  ID HLLGLR+ A E    +P E+F DE Y +SN F LSTSQV    + F  YGPV
Sbjct:   508 ITGMAIDNHLLGLRELAREVCKELP-EMFTDETYLMSNRFVLSTSQVPTTMEMFCCYGPV 566

Query:    63 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDES 103
             VP+GYG  YNP+  +I+FC+S+F  C  TS+ KFA +++ES
Sbjct:   567 VPNGYGACYNPQPESILFCISSFHGCKETSSTKFAKAVEES 607

GO:0043179 "rhythmic excitation" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0007622 "rhythmic behavior" evidence=IEA

GO:0007529 "establishment of synaptic specificity at neuromuscular junction" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004102 "choline O-acetyltransferase activity" evidence=IEA

GO:0042136 "neurotransmitter biosynthetic process" evidence=IEA

FB|FBgn0038486 CG5265 [Drosophila melanogaster (taxid:7227)]

 Score = 258 (95.9 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 49/108 (45%), Positives = 71/108 (65%)

Query:     7 GEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPD 65
             G+G+D HL GL+  A+E+ +P  E F    Y  S +F++STSQVA K D+FMGYGP V D
Sbjct:   521 GKGVDRHLFGLKLMAVENCLPVPEFFSSPGYVKSTHFRMSTSQVATKYDAFMGYGPSVED 580

Query:    66 GYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
             GY C YNPRE  I+  +SA++ C  T   K A +L +S + + +++E+
Sbjct:   581 GYACCYNPREHDIILAISAWRHCQATDHQKIAKALAQSFAEMKDVLET 628

GO:0004092 "carnitine O-acetyltransferase activity" evidence=ISS

GO:0009437 "carnitine metabolic process" evidence=ISS

GO:0006631 "fatty acid metabolic process" evidence=ISS

GO:0005743 "mitochondrial inner membrane" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0005777 "peroxisome" evidence=ISS

MGI|MGI:109501 Crat "carnitine acetyltransferase" [Mus musculus (taxid:10090)]

 Score = 255 (94.8 bits), Expect = 5.9e-21, P = 5.9e-21
 Identities = 52/110 (47%), Positives = 74/110 (67%)

Query:     5 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
             I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +GPVV
Sbjct:   511 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVV 570

Query:    64 PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
             PDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++
Sbjct:   571 PDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQN 620

GO:0004092 "carnitine O-acetyltransferase activity" evidence=ISO

GO:0005102 "receptor binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005777 "peroxisome" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0019254 "carnitine metabolic process, CoA-linked" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P07668	CLAT_DROME	2, ., 3, ., 1, ., 6	0.5789	0.9262	0.1567	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	122
pfam00755	590	pfam00755, Carn_acyltransf, Choline/Carnitine o-ac	1e-37

>gnl|CDD|216101 pfam00755, Carn_acyltransf, Choline/Carnitine o-acyltransferase

 Score =  133 bits (336), Expect = 1e-37
 Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 1/105 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
             E + G+GID HL GL+  A E  +   ELF D ++ LS +F LSTSQV  ++D   G+
Sbjct: 481 TKEAMTGKGIDRHLFGLKLLAKELGVESPELFLDPSWSLSTHFVLSTSQVPTETDIGGGF 540

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESL 104
           GPVV DGYG  YN     I F +S+F SC  T A +FA  L+++L
Sbjct: 541 GPVVDDGYGICYNINGDRIHFHISSFHSCPETDADRFAKYLEKAL 585

Length = 590

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	122
KOG3717|consensus	612		100.0
PF00755	591	Carn_acyltransf: Choline/Carnitine o-acyltransfera	100.0
KOG3719|consensus	638		99.98
KOG3716|consensus	764		99.96
KOG3718|consensus	609		99.93
PF06974	153	DUF1298: Protein of unknown function (DUF1298); In	95.98
TIGR02946	446	acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b	81.31

>KOG3717|consensus

Probab=100.00  E-value=9e-39  Score=260.94  Aligned_cols=113  Identities=53%  Similarity=0.952  Sum_probs=110.5

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhhcCCceEeecCCCCCCcCccccCCccCCceeEEeeecCCeEE
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIV   79 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~~~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d~i~   79 (122)
                      +++|++|.||||||+|||++|.|.+.++ +||.||.|..+++|.|||||+++..+..+||||+++||||+||++++++|.
T Consensus       491 t~~ai~G~gvDrHLlgLk~~a~e~~~~iPelF~dp~y~~s~~F~lSTSQV~t~~d~~m~yGpvv~dGYG~cYNp~~~~i~  570 (612)
T KOG3717|consen  491 TKRAIRGNGVDRHLLGLKLMAIENCKPIPELFKDPSYAISMHFLLSTSQVPTKTDIFMGYGPVVPDGYGCCYNPQEEHII  570 (612)
T ss_pred             HHHHhccccchHHHHHHHHHHHHhCCCcchhhcCcHhhHhheeeeecccCccccceeeeecCcCCCCcccccCCCcceEE
Confidence            4679999999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCccHHHHHHHHHHHHHHHHHHHhc
Q psy4825          80 FCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES  113 (122)
Q Consensus        80 f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll~~  113 (122)
                      |+||+|++|++|++.||+.+|++|++||+++|+.
T Consensus       571 f~isaf~sc~~Ts~~rfak~L~~al~dmkdll~~  604 (612)
T KOG3717|consen  571 FAISAFRSCPETSASRFAKYLEQALDDMRDLLSN  604 (612)
T ss_pred             EEeeccccCccccHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999985

>PF00755 Carn_acyltransf: Choline/Carnitine o-acyltransferase; InterPro: IPR000542 A number of eukaryotic acetyltransferases can, on the basis of sequence similarities, be grouped together into a family

Probab=100.00  E-value=6.9e-36  Score=250.13  Aligned_cols=109  Identities=49%  Similarity=0.775  Sum_probs=100.0

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhhcCCceEeecCCCCCCcCccccCCccCCceeEEeeecCCeEE
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIV   79 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~~~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d~i~   79 (122)
                      |++|++|+||||||+||+++|++.|.++ +||.||+|.++++|.||||++++.....+|||||+||||||+|+|++|+|.
T Consensus       482 ~~~a~~G~G~dRHL~~L~~~a~~~~~~~P~lf~d~~~~~~~~~~lsTS~~~~~~~~~~gfgpv~~dGyGi~Y~i~~~~i~  561 (591)
T PF00755_consen  482 IKEAMRGKGFDRHLFGLRCLAKENGIELPELFSDPAYKRSSNFVLSTSQVPSPALSGGGFGPVVPDGYGICYNIQPDSIS  561 (591)
T ss_dssp             HHHHHTTTSSHHHHHHHHHHHHHTTSS--HHHHSHHHHHHTS-SEEEEEEEESSSEEEE---SSTTSEEEEEEEESSEEE
T ss_pred             HHHHhcCCchHHHHHHHHHHHHhhccchhhhccChHHHhcCCceeecccccccccccccccCCCCcceEEEEEecCCeEE
Confidence            4789999999999999999999999999 899999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCccHHHHHHHHHHHHHHHHH
Q psy4825          80 FCVSAFKSCLTTSAAKFATSLDESLSAIGN  109 (122)
Q Consensus        80 f~vss~~s~~~~~~~~f~~~L~~al~~~~~  109 (122)
                      |+||++++|+.+++++|+++|++||+||++
T Consensus       562 f~iss~~~~~~t~~~~f~~~l~~al~dm~d  591 (591)
T PF00755_consen  562 FSISSFKSCPETSSERFAKALEQALRDMRD  591 (591)
T ss_dssp             EEEEEETTSTTS-HHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCcccHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999985

These enzymes include: Choline o-acetyltransferase 2.3.1.6 from EC, an enzyme that catalyses the biosynthesis of the neurotransmitter acetylcholine []. Carnitine o-acetyltransferase 2.3.1.7 from EC []. Peroxisomal carnitine octanoyltransferase 2.3.1.137 from EC, a fatty acid beta-oxidation pathway enzyme which is involved in the transport of medium-chain acyl-coenzyme A's from peroxisome to mitochondria []. Mitochondrial carnitine palmitoyltransferases I and II 2.3.1.21 from EC (CPT), enzymes involved in fatty acid metabolism and transport []. Mycoplasma pneumoniae putative acetyltransferase C09_orf600. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 2DEB_B 2H4T_A 2FW3_A 2RCU_B 2FYO_A 1S5O_A 1NM8_A 1T7Q_B 2H3W_B 1NDI_B ....

>KOG3719|consensus

Probab=99.98  E-value=9.5e-33  Score=224.64  Aligned_cols=113  Identities=35%  Similarity=0.547  Sum_probs=107.4

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhhcCCceEeecCCCCCCcCccccCCccCCceeEEeeecCCeEE
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIV   79 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~~~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d~i~   79 (122)
                      +|+|++|+|+||||+|||++|+.+++++ +||.||+|.++++++||||++++++...+||||||+|||||+|+|++|.+.
T Consensus       522 tKeasmGqG~DRHl~ALk~la~~e~~~~pdlf~dp~y~~~~~nvLstStlgn~a~~~gGfgPvv~~GFGIGY~I~d~~vg  601 (638)
T KOG3719|consen  522 TKEASMGQGYDRHLFALKHLAQKESIPLPDLFEDPAYTRMNNNVLSTSTLGNPALTAGGFGPVVPNGFGIGYIIKDDQVG  601 (638)
T ss_pred             HHHHhccCchHHHHHHHHHHHHhcCCCCchhhcCcccccccCceEeeccCCchhhhccCccccccCCcceeeEeecCccc
Confidence            5799999999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCccHHHHHHHHHHHHHHHHHHHhcCcc
Q psy4825          80 FCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKI  116 (122)
Q Consensus        80 f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll~~~~~  116 (122)
                      ..|||++.   ..+.+|..+|+++|++|+..++.++.
T Consensus       602 ~vVsS~~~---q~~~~f~~~leksL~ei~~~~~~~ks  635 (638)
T KOG3719|consen  602 AVVSSYKR---QRGARFMFMLEKSLDEIRSYLRMSKS  635 (638)
T ss_pred             eEEecccc---ccHHHHHHHHHHHHHHHHHHHhcccc
Confidence            99999975   34999999999999999999987654

>KOG3716|consensus

Probab=99.96  E-value=7.8e-30  Score=212.09  Aligned_cols=112  Identities=35%  Similarity=0.496  Sum_probs=101.0

Q ss_pred             cccccCCchhHHHHHHHHHHHhCCCCcccccchhhhhcCCceEeecCCCCCC-------------cCccccCCccCCcee
Q psy4825           2 TENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKS-------------DSFMGYGPVVPDGYG   68 (122)
Q Consensus         2 ~~a~~G~G~DRHL~aL~~~a~~~~~~~~lF~d~~~~~~~~~~LSTS~~~~~~-------------~~~~gfgp~~~dGyG   68 (122)
                      ++||.|+|||||||+|+++++..+.+ +.|.|..+  +.+|.|||||+|...             ..++|||||.+||||
T Consensus       636 k~aM~G~GvDRHLF~LyVvskyL~~~-SPFL~~v~--s~~W~LSTSq~P~~q~~~~d~~~~p~~i~~GggFGpvaddGYG  712 (764)
T KOG3716|consen  636 KEAMTGQGVDRHLFALYVVSKYLGVQ-SPFLDEVL--SEKWLLSTSQTPNMQENSFDEDKSPDNISLGGGFGPVADDGYG  712 (764)
T ss_pred             HHHhhcCCccceeeeeeeehhhcccC-ChHHHhhc--CCceeecccCCcccchhccCcccCccccccCCccCCccCCCce
Confidence            68999999999999999999876666 66778755  789999999999775             277899999999999


Q ss_pred             EEeeec-CCeEEEEEEecCCCCCccHHHHHHHHHHHHHHHHHHHhcCcc
Q psy4825          69 CSYNPR-EATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKI  116 (122)
Q Consensus        69 i~Y~i~-~d~i~f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll~~~~~  116 (122)
                      |||++. ++.|.|+|||++|++.||++||.++|.+|+.||++|++..+.
T Consensus       713 VsY~~~G~~~I~fHIsSk~Ss~~TDS~Rfg~hl~eal~di~~Lf~~~~~  761 (764)
T KOG3716|consen  713 VSYIFAGENAIFFHISSKHSSENTDSHRFGQHLKEALHDIADLFEDATA  761 (764)
T ss_pred             eEEEEecCceEEEEeecccccccccHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            999997 678999999999999999999999999999999999988763

>KOG3718|consensus

Probab=99.93  E-value=1.4e-26  Score=187.33  Aligned_cols=108  Identities=31%  Similarity=0.486  Sum_probs=92.8

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhhcC---CceEeecCCCCCCcCcccc-CCccCCceeEEeeecC
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSN---YFKLSTSQVACKSDSFMGY-GPVVPDGYGCSYNPRE   75 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~~~---~~~LSTS~~~~~~~~~~gf-gp~~~dGyGi~Y~i~~   75 (122)
                      |++|+.|+||||||+||+++|.+.+.++ +||.||.|.++.   +|+||||.++..  ..+|| +|+++||||+.|.|.+
T Consensus       491 M~d~~~GkG~DRHl~GL~laa~e~~~~iPefl~dp~fskSGGgGNFvLSTSf~Gy~--~tfG~VapMv~dGYG~FY~I~~  568 (609)
T KOG3718|consen  491 MNDARKGKGIDRHLFGLWLAAYESKMDIPEFLDDPMFSKSGGGGNFVLSTSFLGYT--ATFGFVAPMVFDGYGVFYSITS  568 (609)
T ss_pred             HHHHhcCCCccHHHHHHHHHHHHhcCCchhhhcCccccccCCCCcEEEEeehhcch--hccceeeeecccCcceEEEecc
Confidence            6889999999999999999999999999 899999999977   799999999985  46676 7999999999999999


Q ss_pred             CeEEEEEEecCCCCCccHHHHHHHHHHHHHHHHHHH
Q psy4825          76 ATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLV  111 (122)
Q Consensus        76 d~i~f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll  111 (122)
                      ++|.+.+|+|++|+.++++ |.+.|..++..+..+|
T Consensus       569 ~r~~va~Saw~ds~~t~ae-k~~ni~~~lf~~~~~L  603 (609)
T KOG3718|consen  569 ERVFVATSAWRDSLKTSAE-KFNNIFKDLFRRISVL  603 (609)
T ss_pred             ceEEEehhhhhccchhhHH-HHHHHHHHHHhhHHHh
Confidence            9999999999999766555 5555555555554444

>PF06974 DUF1298: Protein of unknown function (DUF1298); InterPro: IPR009721 This entry represents the C terminus (approximately 170 residues) of a number of hypothetical plant proteins

Probab=95.98  E-value=0.06  Score=38.05  Aligned_cols=70  Identities=14%  Similarity=0.182  Sum_probs=49.9

Q ss_pred             cCCceEeecCCCCCCc---------CccccCC-ccCCceeEEeeecCCeEEEEEEecCCCCCccHHHHHHHHHHHHHHHH
Q psy4825          39 SNYFKLSTSQVACKSD---------SFMGYGP-VVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIG  108 (122)
Q Consensus        39 ~~~~~LSTS~~~~~~~---------~~~gfgp-~~~dGyGi~Y~i~~d~i~f~vss~~s~~~~~~~~f~~~L~~al~~~~  108 (122)
                      ..+..+..|++|.+..         ..+.+.| ..+.|.+|+..=..+++.|.|++-++- --|.++|.+++++++++|+
T Consensus        73 ~~~~~~viSNVPGP~~~l~~~G~~v~~i~~~~~~~~~~L~itv~SY~g~l~~gi~ad~~~-vpD~~~l~~~~~~~l~eL~  151 (153)
T PF06974_consen   73 SPKANLVISNVPGPQEPLYFAGARVEYIYPSPLGDGQALNITVFSYAGKLDFGIVADRDA-VPDPQRLADCFEEALEELK  151 (153)
T ss_pred             cCcceEEEecCCCChhheEECCeeeEEEEeeeecCCcceEEEEEEeCCEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHH
Confidence            3456788889998852         1122222 334455566665689999999997653 3599999999999999998


Q ss_pred             H
Q psy4825         109 N  109 (122)
Q Consensus       109 ~  109 (122)
                      +
T Consensus       152 ~  152 (153)
T PF06974_consen  152 E  152 (153)
T ss_pred             c
Confidence            5

O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity

>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT

Probab=81.31  E-value=11  Score=30.49  Aligned_cols=67  Identities=16%  Similarity=0.287  Sum_probs=45.4

Q ss_pred             ceEeecCCCCCCc----------CccccCCc-cCCceeEEeeecCCeEEEEEEecCCCCCccHHHHHHHHHHHHHHHHH
Q psy4825          42 FKLSTSQVACKSD----------SFMGYGPV-VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGN  109 (122)
Q Consensus        42 ~~LSTS~~~~~~~----------~~~gfgp~-~~dGyGi~Y~i~~d~i~f~vss~~s~~~~~~~~f~~~L~~al~~~~~  109 (122)
                      ..+..|+++.+..          ..+.+.|. .+.|.+|+-.-..+++.+++++-+.. -.+.++|.+++++++.+|.+
T Consensus       367 ~~~~~SNvpg~~~~~~~~g~~v~~~~~~~p~~~~~~l~~~~~sy~g~l~~~~~~d~~~-~~d~~~l~~~~~~~l~~l~~  444 (446)
T TIGR02946       367 FNLVISNVPGPREPLYLAGAKLDELYPLSPLLDGQGLNITVTSYNGQLDFGLLADRDA-VPDPQELADALEAALEELEA  444 (446)
T ss_pred             eeEEEeCCCCCCcccEecCeeEEEeeccccccCCCeEEEEEEecCCeEEEEEeechhh-CCCHHHHHHHHHHHHHHHHh
Confidence            3456677766542          11233443 34455565555689999999987543 34799999999999999965

This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	122
2fy2_A	612	Structures Of Ligand Bound Human Choline Acetyltran		3e-24
1t7q_A	618	Crystal Structure Of The F565a Mutant Of Murine Car		3e-24
1ndf_A	596	Carnitine Acetyltransferase In Complex With Carniti		8e-24
2h3p_A	599	Crystal Structure Of Murine Carnitine Acetyltransfe		8e-24
1nm8_A	616	Structure Of Human Carnitine Acetyltransferase: Mol		1e-23
1q6x_A	644	Crystal Structure Of Rat Choline Acetyltransferase		2e-23
1t1u_A	639	Structural Insights And Functional Implications Of		3e-23
1t7n_A	618	Crystal Structure Of The M564g Mutant Of Murine Cra		1e-22
1ndb_A	596	Crystal Structure Of Carnitine Acetyltransferase Le		1e-22
2h3w_A	599	Crystal Structure Of The S554aM564G MUTANT OF MURIN		2e-22
2deb_A	653	Crystal Structure Of Rat Carnitine Palmitoyltransfe		4e-10
2fw3_A	653	Crystal Structure Of Rat Carnitine Palmitoyltransfe		4e-10
2h4t_A	626	Crystal Structure Of Rat Carnitine Palmitoyltransfe		1e-09
1xmd_A	612	M335v Mutant Structure Of Mouse Carnitine Octanoylt		3e-07
1xmc_A	612	C323m Mutant Structure Of Mouse Carnitine Octanoylt		3e-07
1xl7_A	612	Crystal Structure Of Mouse Carnitine Octanoyltransf		3e-07

>pdb|2FY2|A Chain A, Structures Of Ligand Bound Human Choline Acetyltransferase Provide Insight Into Regulation Of Acetylcholine Synthesis Length = 612

Iteration: 1
 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
Query: 5   IQGEGIDLHLLGLRQ--TALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPV 62
           I G  ID HLL LR+   A+   +P E+F DE Y +SN F LSTSQV   ++ F  YGPV
Sbjct: 494 ITGMAIDNHLLALRELARAMCAALP-EMFMDETYLMSNRFVLSTSQVPTTTEMFCCYGPV 552
Query: 63  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNL 110
           VP+GYG  YNP+  TI+FC+S+F SC  TS++KFA +++ESL  + +L
Sbjct: 553 VPNGYGACYNPQPETILFCISSFHSCAATSSSKFAKAVEESLIDMRDL 600

>pdb|1T7Q|A Chain A, Crystal Structure Of The F565a Mutant Of Murine Carnitine Acetyltransferase In Complex With Carnitine And Coa Length = 618

Iteration: 1
 Score =  106 bits (264), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 5   IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +GPVV
Sbjct: 503 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMAFGPVV 562
Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           PDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++
Sbjct: 563 PDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQN 612

>pdb|1NDF|A Chain A, Carnitine Acetyltransferase In Complex With Carnitine Length = 596

Iteration: 1
 Score =  105 bits (261), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 5   IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +GPVV
Sbjct: 482 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVV 541
Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           PDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++
Sbjct: 542 PDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQN 591

>pdb|2H3P|A Chain A, Crystal Structure Of Murine Carnitine Acetyltransferase In Complex With Carnitine And Acetyl-Coa Length = 599

Iteration: 1
 Score =  105 bits (261), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 5   IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +GPVV
Sbjct: 485 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVV 544
Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 114
           PDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++ 
Sbjct: 545 PDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 595

>pdb|1NM8|A Chain A, Structure Of Human Carnitine Acetyltransferase: Molecular Basis For Fatty Acyl Transfer Length = 616

Iteration: 1
 Score =  104 bits (260), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 5   IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +GPVV
Sbjct: 490 IRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMHFHLSTSQVPAKTDCVMFFGPVV 549
Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           PDGYG  YNP EA I F +SA+ SC  T+AA+ A  L+++L  +  L++S
Sbjct: 550 PDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQS 599

>pdb|1Q6X|A Chain A, Crystal Structure Of Rat Choline Acetyltransferase Length = 644

Iteration: 1
 Score =  103 bits (257), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Query: 5   IQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I G  ID HLL LR+ A +    P E+F DE Y +SN F LSTSQV    + F  YGPVV
Sbjct: 507 ITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVV 566
Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 115
           P+GYG  YNP+   I FC+S+F SC  TS+ +FA ++  SL  + +L  SR+
Sbjct: 567 PNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSSRQ 618

>pdb|1T1U|A Chain A, Structural Insights And Functional Implications Of Choline Acetyltransferase Length = 639

Iteration: 1
 Score =  103 bits (257), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Query: 5   IQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I G  ID HLL LR+ A +    P E+F DE Y +SN F LSTSQV    + F  YGPVV
Sbjct: 506 ITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVV 565
Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 115
           P+GYG  YNP+   I FC+S+F SC  TS+ +FA ++  SL  + +L  SR+
Sbjct: 566 PNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSSRQ 617

>pdb|1T7N|A Chain A, Crystal Structure Of The M564g Mutant Of Murine Crat Length = 618

Iteration: 1
 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 5   IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D    +GPVV
Sbjct: 503 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVGFFGPVV 562
Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           PDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++
Sbjct: 563 PDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQN 612

>pdb|1NDB|A Chain A, Crystal Structure Of Carnitine Acetyltransferase Length = 596

Iteration: 1
 Score =  101 bits (251), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/101 (49%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 5   IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D    +GPVV
Sbjct: 482 IRGEAFDRHLLGLKLQAIEDLVSXPDIFXDTSYAIAXHFNLSTSQVPAKTDCVXFFGPVV 541
Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESL 104
           PDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L
Sbjct: 542 PDGYGICYNPXEAHINFSVSAYNSCAETNAARXAHYLEKAL 582

>pdb|2H3W|A Chain A, Crystal Structure Of The S554aM564G MUTANT OF MURINE Carnitine Acetyltransferase In Complex With Hexanoylcarnitine And Coa Length = 599

Iteration: 1
 Score =  100 bits (249), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 5   IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVV 63
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LST+QV  K+D    +GPVV
Sbjct: 485 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTAQVPAKTDCVGFFGPVV 544
Query: 64  PDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 114
           PDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++ 
Sbjct: 545 PDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 595

>pdb|2DEB|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase 2 In Space Group C2221 Length = 653

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 3   ENIQGEGIDLHLLGLR--QTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYG 60
           E   G+G D HL  LR   TA   N+P EL+ D AY+  N+  LSTS +   + S  G+ 
Sbjct: 540 EAAXGQGFDRHLYALRYLATARGLNLP-ELYLDPAYQQXNHNILSTSTLNSPAVSLGGFA 598
Query: 61  PVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKIST 118
           PVVPDG+G +Y   +  I   VS++      +A +F   + + L  I + +E + I T
Sbjct: 599 PVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDIFDALEGKAIKT 653

>pdb|2FW3|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase 2 In Complex With Antidiabetic Drug St1326 Length = 653

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 3   ENIQGEGIDLHLLGLR--QTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYG 60
           E   G+G D HL  LR   TA   N+P EL+ D AY+  N+  LSTS +   + S  G+ 
Sbjct: 540 EAAMGQGFDRHLYALRYLATARGLNLP-ELYLDPAYQQMNHNILSTSTLNSPAVSLGGFA 598
Query: 61  PVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKIST 118
           PVVPDG+G +Y   +  I   VS++      +A +F   + + L  I + +E + I T
Sbjct: 599 PVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDIFDALEGKAIKT 653

>pdb|2H4T|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase Ii Length = 626

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 3   ENIQGEGIDLHLLGLR--QTALEHNIPCELFQDEAYKLSNYFKLSTSQVACKSDSFMGYG 60
           E   G+G D HL  LR   TA   N+P EL+ D AY+  N+  LSTS +   + S  G+ 
Sbjct: 515 EATMGQGFDRHLYALRYLATARGLNLP-ELYLDPAYQQMNHNILSTSTLNSPAVSLGGFA 573
Query: 61  PVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKI 116
           PVVPDG+G +Y   +  I   VS++      +A +F   + + L  I + +E + I
Sbjct: 574 PVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDIFDALEGKAI 626

>pdb|1XMD|A Chain A, M335v Mutant Structure Of Mouse Carnitine Octanoyltransferase Length = 612

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSN---YFKLSTSQVACKSDSF 56
           M +   G+G D HLLGL   A E  +P  ELF+D  +  S     F LSTS V       
Sbjct: 494 MKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVLSTSLV------- 546
Query: 57  MGY----GPVVP---DGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGN 109
            GY    G VVP   +GYG  Y+ R+   V   S+++SC  T A K    +  +   +  
Sbjct: 547 -GYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQ 605
Query: 110 LVES 113
           L+ +
Sbjct: 606 LMNT 609

>pdb|1XMC|A Chain A, C323m Mutant Structure Of Mouse Carnitine Octanoyltransferase Length = 612

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSN---YFKLSTSQVACKSDSF 56
           M +   G+G D HLLGL   A E  +P  ELF+D  +  S     F LSTS V       
Sbjct: 494 MKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVLSTSLV------- 546
Query: 57  MGY----GPVVP---DGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGN 109
            GY    G VVP   +GYG  Y+ R+   V   S+++SC  T A K    +  +   +  
Sbjct: 547 -GYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQ 605
Query: 110 LVES 113
           L+ +
Sbjct: 606 LMNT 609

>pdb|1XL7|A Chain A, Crystal Structure Of Mouse Carnitine Octanoyltransferase Length = 612

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 6   QGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSN---YFKLSTSQVACKSDSFMGY-- 59
            G+G D HLLGL   A E  +P  ELF+D  +  S     F LSTS V        GY  
Sbjct: 499 HGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVLSTSLV--------GYLR 550
Query: 60  --GPVVP---DGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSL 100
             G VVP   +GYG  Y+ R+   V   S+++SC  T A K    +
Sbjct: 551 VQGVVVPXVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQXI 596

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	122
1t1u_A	639	Choline O-acetyltransferase; choline acetyltransfe	5e-32
1nm8_A	616	Carnitine O-acetyltransferase; two equally sized d	4e-31
2deb_A	653	CPT II, carnitine O-palmitoyltransferase II, mitoc	1e-30
1xl7_A	612	COT, peroxisomal carnitine O-octanoyltransferase;	2e-27

>1t1u_A Choline O-acetyltransferase; choline acetyltransferase; 1.55A {Rattus norvegicus} SCOP: c.43.1.3 c.43.1.3 PDB: 1q6x_A 2fy2_A 2fy3_A 2fy4_A* 2fy5_A* Length = 639

 Score =  117 bits (293), Expect = 5e-32
 Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
               I G  ID HLL LR+ A +      E+F DE Y +SN F LSTSQV    + F  Y
Sbjct: 502 TVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCY 561

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 115
           GPVVP+GYG  YNP+   I FC+S+F SC  TS+ +FA ++  SL  + +L  SR+
Sbjct: 562 GPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSSRQ 617

>1nm8_A Carnitine O-acetyltransferase; two equally sized domains, anti-parallel beta-strand; 1.60A {Homo sapiens} SCOP: c.43.1.3 c.43.1.3 PDB: 1s5o_A* 2h3u_A* 2h3p_A* 1t7q_A* 1t7n_A 1t7o_A* 1ndb_A 1ndf_A* 1ndi_A* 2h3w_A* Length = 616

 Score =  114 bits (286), Expect = 4e-31
 Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
               I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +
Sbjct: 486 TDRAIRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMHFHLSTSQVPAKTDCVMFF 545

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           GPVVPDGYG  YNP EA I F +SA+ SC  T+AA+ A  L+++L  +  L++S
Sbjct: 546 GPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQS 599

>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A* Length = 653

 Score =  113 bits (284), Expect = 1e-30
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 4/119 (3%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
             E   G+G D HL  LR  A    +   EL+ D AY+  N+  LSTS +   + S  G+
Sbjct: 538 TKEAAMGQGFDRHLYALRYLATARGLNLPELYLDPAYQQMNHNILSTSTLNSPAVSLGGF 597

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKIST 118
            PVVPDG+G +Y   +  I   VS++      +A +F   + + L  I + +E + I T
Sbjct: 598 APVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDIFDALEGKAIKT 653

>1xl7_A COT, peroxisomal carnitine O-octanoyltransferase; selenomethionine, hepes; HET: EPE; 2.00A {Mus musculus} SCOP: c.43.1.3 c.43.1.3 PDB: 1xl8_A* 1xmd_A* 1xmc_A* Length = 612

 Score =  104 bits (259), Expect = 2e-27
 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 5/120 (4%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYK---LSNYFKLSTSQVACKSDSF 56
           M +   G+G D HLLGL   A E  +P  ELF+D  +        F LSTS V       
Sbjct: 494 MKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVLSTSLVGYLR-VQ 552

Query: 57  MGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKI 116
               P+V +GYG  Y+ R+   V   S+++SC  T A K    +  +   +  L+ +  +
Sbjct: 553 GVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQLMNTAHL 612

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	122
1nm8_A	616	Carnitine O-acetyltransferase; two equally sized d	100.0
1t1u_A	639	Choline O-acetyltransferase; choline acetyltransfe	100.0
1xl7_A	612	COT, peroxisomal carnitine O-octanoyltransferase;	100.0
2deb_A	653	CPT II, carnitine O-palmitoyltransferase II, mitoc	100.0

>1nm8_A Carnitine O-acetyltransferase; two equally sized domains, anti-parallel beta-strand; 1.60A {Homo sapiens} SCOP: c.43.1.3 c.43.1.3 PDB: 1s5o_A* 2h3u_A* 2h3p_A* 1t7q_A* 1t7n_A 1t7o_A* 1ndb_A 1ndf_A* 1ndi_A* 2h3w_A*

Probab=100.00  E-value=5.8e-39  Score=268.70  Aligned_cols=115  Identities=45%  Similarity=0.763  Sum_probs=110.1

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhhcCCceEeecCCCCCCcCccccCCccCCceeEEeeecCCeEE
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIV   79 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~~~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d~i~   79 (122)
                      |++|+.|+|||||||||+++|++.|.++ +||.||+|.++++|.|||||++++....+|||||+||||||+|+|.+|+|.
T Consensus       486 ~~~a~~G~G~DRHL~gL~~~a~~~g~~~P~lF~dp~~~~~~~~~LSTSq~~~~~~~~~gfgPv~~dGyGi~Y~i~~~~i~  565 (616)
T 1nm8_A          486 TDRAIRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMHFHLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMEAHIN  565 (616)
T ss_dssp             HHHHHTTCCSHHHHHHHHHHHHHTTCCCCHHHHSHHHHHHTCCSEEEEECCCSSSCEEECCCSSTTCEEEEEEECSSCEE
T ss_pred             HHHHHhccChHHHHHHHHHHHHHcCCCCcccccCchhhhcCCCEEeecCCCCCccCceEEecCCCCeeEEEEEecCCeEE
Confidence            4789999999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCccHHHHHHHHHHHHHHHHHHHhcCc
Q psy4825          80 FCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK  115 (122)
Q Consensus        80 f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll~~~~  115 (122)
                      |+||+|++|+.+++++|+++|++||.||++||+..+
T Consensus       566 f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~~~~  601 (616)
T 1nm8_A          566 FSLSAYNSCAETNAARLAHYLEKALLDMRALLQSHP  601 (616)
T ss_dssp             EEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred             EEEEeCCCCccccHHHHHHHHHHHHHHHHHHHhccc
Confidence            999999999999999999999999999999998654

>1t1u_A Choline O-acetyltransferase; choline acetyltransferase; 1.55A {Rattus norvegicus} SCOP: c.43.1.3 c.43.1.3 PDB: 1q6x_A 2fy2_A 2fy3_A 2fy4_A* 2fy5_A*

Probab=100.00  E-value=5.4e-39  Score=269.76  Aligned_cols=114  Identities=46%  Similarity=0.752  Sum_probs=110.0

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhhcCCceEeecCCCCCCcCccccCCccCCceeEEeeecCCeEE
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIV   79 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~~~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d~i~   79 (122)
                      |++|+.|+|||||||||++++++.|.++ +||.||+|.++++|.|||||++++....+|||||+||||||+|+|.+|+|.
T Consensus       502 ~~~a~~G~G~DRHL~gL~~~a~~~g~~~P~lF~dp~~~~~~~~~LSTSq~~~~~~~~~gfgPv~~dGyGi~Y~i~~~~i~  581 (639)
T 1t1u_A          502 TVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVVPNGYGACYNPQPEAIT  581 (639)
T ss_dssp             HHHHHTTCSSHHHHHHHHHHHHHTTCSCCHHHHSHHHHHHTCCSEEEEECCCSSSEEEECCCSSTTCEEEEEEECSSCEE
T ss_pred             HHHHHcCCChHHHHHHHHHHHHhcCCCCcccccCchhhhhCCCEEEecCCCCCccccceEcccCCCceEEEEEEcCCeEE
Confidence            4789999999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCccHHHHHHHHHHHHHHHHHHHhcC
Q psy4825          80 FCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR  114 (122)
Q Consensus        80 f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll~~~  114 (122)
                      |+||+|++|+.+++++|+++|++||.||++||+..
T Consensus       582 f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~~~  616 (639)
T 1t1u_A          582 FCISSFHSCKETSSVEFAEAVGASLVDMRDLCSSR  616 (639)
T ss_dssp             EEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHCC-
T ss_pred             EEEEeCCCCcccCHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999855

>1xl7_A COT, peroxisomal carnitine O-octanoyltransferase; selenomethionine, hepes; HET: EPE; 2.00A {Mus musculus} SCOP: c.43.1.3 c.43.1.3 PDB: 1xl8_A* 1xmd_A* 1xmc_A*

Probab=100.00  E-value=8.2e-38  Score=261.59  Aligned_cols=113  Identities=33%  Similarity=0.483  Sum_probs=108.1

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhh---cCCceEeecCCCCCCcCccccCCccCCceeEEeeecCC
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKL---SNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREA   76 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~---~~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d   76 (122)
                      |++|+.|+||||||+||+++|++.|.++ +||.||+|.+   +++|.|||||+ +.....+|||||+||||||+|+|.+|
T Consensus       494 ~~~a~~G~G~DRHL~gL~~~a~~~g~~~P~lF~d~~~~~sg~~~~~~LSTS~~-~~~~~~~gfgPv~~dGyGi~Y~i~~~  572 (612)
T 1xl7_A          494 MKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVLSTSLV-GYLRVQGVVVPMVHNGYGFFYHIRDD  572 (612)
T ss_dssp             HHHHHTTCCSHHHHHHHHHHHHHTTCCCCGGGTSHHHHHTTTTTCCSEEEEEC-CSSSCCCBCCCSSTTCEEEEEEEETT
T ss_pred             HHHHHhccchHHHHHHHHHHHHHcCCCCchhhcChhhhcccCCCCCEEecCCC-CCCCCCcEEeccCCCeEEEEEEEcCC
Confidence            4789999999999999999999999998 9999999999   99999999999 67789999999999999999999999


Q ss_pred             eEEEEEEecCCCCCccHHHHHHHHHHHHHHHHHHHhcC
Q psy4825          77 TIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR  114 (122)
Q Consensus        77 ~i~f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll~~~  114 (122)
                      +|.|+||+|++|+.+++++|+++|++||.||++||+..
T Consensus       573 ~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~~~  610 (612)
T 1xl7_A          573 RFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQLMNTA  610 (612)
T ss_dssp             EEEEEEEEETTCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999753

>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A*

Probab=100.00  E-value=2e-37  Score=260.71  Aligned_cols=114  Identities=33%  Similarity=0.497  Sum_probs=109.1

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhhcCCceEeecCCCCCCcCccccCCccCCceeEEeeecCCeEE
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIV   79 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~~~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d~i~   79 (122)
                      |++|+.|+||||||||||+++++.|+++ +||.||+|.++++|.|||||++++.+..+|||||+||||||+|+|.+|+|.
T Consensus       538 ~k~a~~G~G~DRHL~gL~~~a~~~g~~~P~lF~Dp~y~~~~~~~LSTS~~~~~~~~~~gfgPv~~dGyGi~Y~i~~~~i~  617 (653)
T 2deb_A          538 TKEAAMGQGFDRHLYALRYLATARGLNLPELYLDPAYQQMNHNILSTSTLNSPAVSLGGFAPVVPDGFGIAYAVHDDWIG  617 (653)
T ss_dssp             HHHHHTTCCSHHHHHHHHHHHHHTTCCCCGGGGSHHHHHHTSCSEEEEECCCTTEEEEECCCSSTTCEEEEEEECSSCEE
T ss_pred             HHHHHhccchHHHHHHHHHHHHHcCCCCchhhcChhhhhhCCcEEeecCCCCCccccceeeccCCCceEEEEEecCCeEE
Confidence            4789999999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCccHHHHHHHHHHHHHHHHHHHhcCccc
Q psy4825          80 FCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKIS  117 (122)
Q Consensus        80 f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll~~~~~~  117 (122)
                      |+||+|+   .+++++|+++|++||.||++||+..++.
T Consensus       618 f~iSs~~---~t~~~~F~~~L~~al~dm~~ll~~~~~~  652 (653)
T 2deb_A          618 CNVSSYS---GRNAREFLHCVQKCLEDIFDALEGKAIK  652 (653)
T ss_dssp             EEEEECT---TSCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             EEEEeCC---CCCHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            9999997   6899999999999999999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	122
d1nm8a2	214	c.43.1.3 (A:386-599) Carnitine acetyltransferase {	2e-40
d1t1ua2	215	c.43.1.3 (A:402-616) Choline O-acetyltransferase {	4e-39
d1xl7a2	218	c.43.1.3 (A:393-610) Peroxisomal carnitine O-octan	9e-34

>d1nm8a2 c.43.1.3 (A:386-599) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 214

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Carnitine acetyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (331), Expect = 2e-40
 Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
               I+GE  D HLLGL+  A+E  +   ++F D +Y ++ +F LSTSQV  K+D  M +
Sbjct: 101 TDRAIRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMHFHLSTSQVPAKTDCVMFF 160

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           GPVVPDGYG  YNP EA I F +SA+ SC  T+AA+ A  L+++L  +  L++S
Sbjct: 161 GPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQS 214

>d1t1ua2 c.43.1.3 (A:402-616) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 215

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Choline O-acetyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  128 bits (323), Expect = 4e-39
 Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 1/114 (0%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLSNYFKLSTSQVACKSDSFMGY 59
               I G  ID HLL LR+ A +      E+F DE Y +SN F LSTSQV    + F  Y
Sbjct: 102 TVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCY 161

Query: 60  GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
           GPVVP+GYG  YNP+   I FC+S+F SC  TS+ +FA ++  SL  + +L  S
Sbjct: 162 GPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSS 215

>d1xl7a2 c.43.1.3 (A:393-610) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]} Length = 218

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Peroxisomal carnitine O-octanoyltransferase, COT
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  114 bits (287), Expect = 9e-34
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 1   MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNY---FKLSTSQVACKSDSF 56
           M +   G+G D HLLGL   A E  +P  ELF+D  +  S     F LSTS V       
Sbjct: 102 MKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVLSTSLVGYL-RVQ 160

Query: 57  MGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 113
               P+V +GYG  Y+ R+   V   S+++SC  T A K    +  +   +  L+ +
Sbjct: 161 GVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQLMNT 217

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	122
d1t1ua2	215	Choline O-acetyltransferase {Rat (Rattus norvegicu	100.0
d1nm8a2	214	Carnitine acetyltransferase {Human (Homo sapiens)	100.0
d1xl7a2	218	Peroxisomal carnitine O-octanoyltransferase, COT {	100.0

>d1t1ua2 c.43.1.3 (A:402-616) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Choline O-acetyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-42  Score=255.15  Aligned_cols=113  Identities=46%  Similarity=0.745  Sum_probs=109.5

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhhcCCceEeecCCCCCCcCccccCCccCCceeEEeeecCCeEE
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIV   79 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~~~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d~i~   79 (122)
                      +++|++|+||||||+|||.++++.|.++ +||.||+|.++++|.|||||++++.+..+||||++||||||+|+|++|+|.
T Consensus       102 ~~~a~~G~G~dRHL~aL~~~a~~~g~~~p~lF~d~~~~~~~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d~i~  181 (215)
T d1t1ua2         102 TVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVVPNGYGACYNPQPEAIT  181 (215)
T ss_dssp             HHHHHTTCSSHHHHHHHHHHHHHTTCSCCHHHHSHHHHHHTCCSEEEEECCCSSSEEEECCCSSTTCEEEEEEECSSCEE
T ss_pred             HHHHHhCCChHHHHHHHHHHHHHcCCCCchhhcChHHHhhCCCEEecCCCCCCccccccccCcCCCceEEEEEecCCEEE
Confidence            4689999999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCccHHHHHHHHHHHHHHHHHHHhc
Q psy4825          80 FCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES  113 (122)
Q Consensus        80 f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll~~  113 (122)
                      |+||+|++|+++++++|.++|++||.||++||++
T Consensus       182 f~iss~~s~~~t~~~~f~~~L~~al~~m~~ll~~  215 (215)
T d1t1ua2         182 FCISSFHSCKETSSVEFAEAVGASLVDMRDLCSS  215 (215)
T ss_dssp             EEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEEEeCCCCcccCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999863

>d1nm8a2 c.43.1.3 (A:386-599) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Carnitine acetyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=252.13  Aligned_cols=113  Identities=46%  Similarity=0.776  Sum_probs=109.7

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhhcCCceEeecCCCCCCcCccccCCccCCceeEEeeecCCeEE
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREATIV   79 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~~~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d~i~   79 (122)
                      |++|++|+||||||+||+.+|++.|+++ +||.||+|.++++|.|||||++++....+||||++||||||+|+|.+|+|.
T Consensus       101 ~~~a~~G~G~dRHL~aL~~~a~~~g~~~P~lF~d~~~~~~~~~~LsTS~~~~~~~~~~~~gp~~~dGyGi~Y~i~~~~i~  180 (214)
T d1nm8a2         101 TDRAIRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMHFHLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMEAHIN  180 (214)
T ss_dssp             HHHHHTTCCSHHHHHHHHHHHHHTTCCCCHHHHSHHHHHHTCCSEEEEECCCSSSCEEECCCSSTTCEEEEEEECSSCEE
T ss_pred             HHHHHcCCCcHHHHHHHHHHHHHcCCCCCchhcCHHHHHhCCCEEEcCCCCCCccceeeecCCCCCeeEEEEEecCCEEE
Confidence            4689999999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCccHHHHHHHHHHHHHHHHHHHhc
Q psy4825          80 FCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES  113 (122)
Q Consensus        80 f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll~~  113 (122)
                      |+||+|++|+++++++|.++|++||.||++||++
T Consensus       181 f~iss~~~~~~t~~~~f~~~L~~al~dm~~ll~~  214 (214)
T d1nm8a2         181 FSLSAYNSCAETNAARLAHYLEKALLDMRALLQS  214 (214)
T ss_dssp             EEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEecCCCcccCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999974

>d1xl7a2 c.43.1.3 (A:393-610) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Peroxisomal carnitine O-octanoyltransferase, COT
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.9e-40  Score=242.89  Aligned_cols=112  Identities=34%  Similarity=0.506  Sum_probs=105.7

Q ss_pred             CcccccCCchhHHHHHHHHHHHhCCCCc-ccccchhhhhc---CCceEeecCCCCCCcCccccCCccCCceeEEeeecCC
Q psy4825           1 MTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLS---NYFKLSTSQVACKSDSFMGYGPVVPDGYGCSYNPREA   76 (122)
Q Consensus         1 ~~~a~~G~G~DRHL~aL~~~a~~~~~~~-~lF~d~~~~~~---~~~~LSTS~~~~~~~~~~gfgp~~~dGyGi~Y~i~~d   76 (122)
                      |++|++|+||||||+||+.++++.|+++ +||.||+|.++   .+|.||||+++... ..+||+|++||||||+|+|++|
T Consensus       102 ~~~a~~G~G~dRHL~~L~~~a~~~g~~~P~lF~d~~~~~s~~~~~~~LsTS~~~~~~-~~g~f~P~~~dGyGi~Y~i~~d  180 (218)
T d1xl7a2         102 MKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVLSTSLVGYLR-VQGVVVPMVHNGYGFFYHIRDD  180 (218)
T ss_dssp             HHHHHTTCCSHHHHHHHHHHHHHTTCCCCGGGTSHHHHHTTTTTCCSEEEEECCSSS-CCCBCCCSSTTCEEEEEEEETT
T ss_pred             HHHHHcCCChHHHHHHHHHHHHHcCCCCCccccCcHHhhcCCCCCEEEecCCCCCcc-ccceecCCCCCeeEEEEEecCC
Confidence            4689999999999999999999999999 99999999987   57999999999865 5678999999999999999999


Q ss_pred             eEEEEEEecCCCCCccHHHHHHHHHHHHHHHHHHHhc
Q psy4825          77 TIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES  113 (122)
Q Consensus        77 ~i~f~vss~~s~~~~~~~~f~~~L~~al~~~~~ll~~  113 (122)
                      +|.|+||+|++|+++++++|.++|++||.||++||+.
T Consensus       181 ~i~~~vss~~s~~~t~~~~f~~~L~~al~dm~~ll~~  217 (218)
T d1xl7a2         181 RFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQLMNT  217 (218)
T ss_dssp             EEEEEEEEETTCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEecCCCCccCHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999975